Citrus Sinensis ID: 028056

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
MANSLFAFRSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAMDFEV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccccEEEEEEcccccHHcHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHHHcccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHccccEEEEcccccccccccccEEEEEcccccHHHHHHHHHHHccccEEEEEEEccHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHHHcccEEEEEccccccccccccccccHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MANSLFAFRSIRKVaftssasasvkwKGGVSLVQGASRGIGLEFAKQLLEkndkgcviatcrnpngatglldlknrfpeRLDVLQLDLTVESTIEASAKSIKEKYGSLNLLinasgilsipnvlqpettlnkVEKSSLMLAYEVNAVGPILVIKhmspllkvggtgiERDVAVVANLSArvgsigdnrlggwhSYRASKAALNQCKILAMDFEV
Flexible Loop (DISEMBL)
MANSLFAFRSIRKvaftssasasvkwkGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSArvgsigdnrlggWHSYRASKAALNQCKILAMDFEV
Low Complexity Region (SEG)
MANSLFAFRSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAMDFEV
Disordered region (IsUnstruct)
****LFAFRSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAM****
Disordered Region (DISOPRED)
******************************SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG*********RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV*****ERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAMDFEV
Disordered Region (DISEMBL)
MANSLFAFRSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAMDFEV
Disordered Region (DISPRO)
********RSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAMDFEV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MANSLFAFRSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAMDFEV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	214	2.2.26 [Sep-21-2011]
Q7Z9I2	253	Uncharacterized oxidoredu	yes	no	0.738	0.624	0.312	1e-12
P40580	263	Benzil reductase ((S)-ben	yes	no	0.789	0.642	0.274	3e-09
Q7Z9I4	253	Uncharacterized oxidoredu	no	no	0.733	0.620	0.288	1e-08
Q7Z9I3	253	Uncharacterized oxidoredu	no	no	0.733	0.620	0.282	1e-07
Q9P7I6	254	Uncharacterized oxidoredu	no	no	0.752	0.633	0.288	2e-07
O88736	334	3-keto-steroid reductase	yes	no	0.612	0.392	0.272	1e-06
A2RVM0	322	Short-chain dehydrogenase	no	no	0.771	0.512	0.291	1e-06
P21158	166	C-factor OS=Myxococcus xa	no	no	0.401	0.518	0.336	3e-06
Q6WAU1	314	(-)-isopiperitenone reduc	N/A	no	0.397	0.270	0.395	8e-06
Q9KQH7	244	3-oxoacyl-[acyl-carrier-p	no	no	0.401	0.352	0.362	9e-06

>sp|Q7Z9I2|YCP9_SCHPO Uncharacterized oxidoreductase C663.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.09c PE=3 SV=1

 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 18/176 (10%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V  + G +RGIGL   K+L  + +   V A+ R P  AT L +     P  +  ++LD+T
Sbjct: 7   VYFIAGGNRGIGLSLVKELSSR-EGTTVFASARKPEAATELQEWSKSHP-NVKTVELDVT 64

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGIL-SIPNVLQ-PETTLNKVEKSSLMLAYEVNAV 147
            + +   +A+S+ +    +++L   SGI  S   V++ PE   N          Y+ N +
Sbjct: 65  SQQSANEAAQSVAKAVDGIDVLWLNSGICQSYYTVMEAPEEVWNA--------HYQTNVL 116

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           GPI V K   PLL       ++    V   S+  GS+GD R  G+ +Y  SKAA+N
Sbjct: 117 GPIHVFKAFYPLL------TKKKTRQVIFTSSECGSMGDFRATGFSAYGQSKAAIN 166

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|P40580|BZRD_YEAST Benzil reductase ((S)-benzoin forming) IRC24 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRC24 PE=1 SV=1

 Score = 62.0 bits (149), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 17/186 (9%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQL 86
           G V L+ GASRGIGL+  K ++E++D+  V    R      GL  L+  +  ++     L
Sbjct: 2   GKVILITGASRGIGLQLVKTVIEEDDECIVYGVART---EAGLQSLQREYGADKFVYRVL 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T  S +EA  + I++K+G L+ ++  +G+L     +    + + +++   +  ++VN 
Sbjct: 59  DITDRSRMEALVEEIRQKHGKLDGIVANAGMLEPVKSISQSNSEHDIKQWERL--FDVNF 116

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCK 206
              + ++    PLLK            V N+             GW +Y  SKAALN   
Sbjct: 117 FSIVSLVALCLPLLKSS--------PFVGNIVFVSSGASVKPYNGWSAYGCSKAALNH-- 166

Query: 207 ILAMDF 212
             AMD 
Sbjct: 167 -FAMDI 171

Reduces benzil stereospecifically to (S)-benzoin. Is probably involved in a pathway contributing to genomic integrity.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 0

>sp|Q7Z9I4|YCP6_SCHPO Uncharacterized oxidoreductase C663.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.06c PE=3 SV=1

 Score = 60.1 bits (144), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 20/177 (11%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVI-ATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
           +  + G +RGIGL   K+L   N +G V+ A+ R P  AT L +  ++    + +++LD+
Sbjct: 7   IYFIAGGNRGIGLSLVKEL--SNREGTVVFASARKPEAATELQEW-SKSHSNVHIIKLDI 63

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYEVNA 146
           +   +   +A+ + +  G +++L   SGI    N +   P+   N          Y+ N 
Sbjct: 64  SSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNS--------HYKTNV 115

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +GPI V +   PL+K G + I      +   S+ VGS+G         Y  SKAALN
Sbjct: 116 LGPIHVYQAFYPLVKKGESKI------IVFTSSLVGSMGAFFPFNQSGYGQSKAALN 166

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q7Z9I3|YCP8_SCHPO Uncharacterized oxidoreductase C663.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.08c PE=3 SV=1

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 20/177 (11%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVI-ATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
           +  + G +RGIGL   K+L   N KG V+ A+ R P  AT L +  ++    + +++LD+
Sbjct: 7   IYFIAGGNRGIGLSLVKEL--SNRKGTVVFASARKPGAATKLQEW-SKSHSNVHIIKLDV 63

Query: 89  TVESTIEASAKSIKEKYGSLNLL-INASGILSI-PNVLQPETTLNKVEKSSLMLAYEVNA 146
           +   +   +A+ + +   ++++L +N++   S  P V  P+   N          Y+ N 
Sbjct: 64  SSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNS--------HYKTNV 115

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +GPI V +   PL+K G + I      +   S+  GS+G        +Y  SKAALN
Sbjct: 116 LGPIHVYQAFYPLIKKGRSKI------IVFTSSLAGSMGAFFPSSQSAYGQSKAALN 166

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9P7I6|YJNK_SCHPO Uncharacterized oxidoreductase C24B10.20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC24B10.20 PE=3 SV=1

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 16/177 (9%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           G V ++ G +RGIGL   K+L   N +G  V A+ R P  A+ L D  ++    + +++L
Sbjct: 6   GIVYVIVGGNRGIGLSLVKEL--SNKEGVTVFASARGPGSASELKDW-SKTHSNVHIIKL 62

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T   + + +A  +++    +++L   SG   I    QP   + K      M  Y+ N 
Sbjct: 63  DVTSLRSAKDAAMQVEKVVKCIDVLWVNSG---ISKSFQP---VLKTSDELWMSHYQTNV 116

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +GPI V +    LLK G     +++   ++++A +G +   R   + +Y  SKAALN
Sbjct: 117 LGPIHVYQAFYHLLKEGKL---KNIVFTSSMAACMGGV---RPNTYSAYGQSKAALN 167

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O88736|DHB7_MOUSE 3-keto-steroid reductase OS=Mus musculus GN=Hsd17b7 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 23/154 (14%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQLD 87
           V L+ GAS GIGL    +LL ++D   +   CRN + A  + D  L +     + ++Q+D
Sbjct: 4   VVLITGASSGIGLALCGRLLAEDDDLHLCLACRNLSKARAVRDTLLASHPSAEVSIVQMD 63

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIP--------------NVLQPETTL--- 130
           ++   ++   A+ +K+K+  L+ L   +GIL  P              NV+   TT    
Sbjct: 64  VSSLQSVVRGAEEVKQKFQRLDYLYLNAGILPNPQFNLKAFFCGIFSRNVIHMFTTAEGI 123

Query: 131 ----NKVEKSSLMLAYEVNAVGPILVIKHMSPLL 160
               + V    L   +E N  G  ++I+ + PLL
Sbjct: 124 LTQNDSVTADGLQEVFETNLFGHFILIRELEPLL 157

Responsible for the reduction of the keto group on the C-3 of sterols.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 2

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 17/182 (9%)

Query: 5   LFAFRSIRKVAFTSSASAS-----VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA 59
           ++ F S     F+S ++A      V   G  ++V GAS GIG+E A+ +L       V+A
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETAR-VLSLRGVHVVMA 59

Query: 60  TCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGIL 118
                +GA    D+  + P  +LDV++LDL+   ++   A   K     LNLLIN +GI+
Sbjct: 60  VRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIM 119

Query: 119 SIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178
           + P +L          K ++ L +  N +G  L+ K +   +K      +R+  +V NLS
Sbjct: 120 ACPFMLS---------KDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIV-NLS 169

Query: 179 AR 180
           + 
Sbjct: 170 SE 171

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P21158|CSGA_MYXXA C-factor OS=Myxococcus xanthus GN=csgA PE=1 SV=1

 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 12/98 (12%)

Query: 106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGT 165
           G +++LIN +G+  +         L  V+ + +   + +NA+GP+ V   M P L+ G  
Sbjct: 11  GPVDVLINNAGVSGL------WCALGDVDYADMARTFTINALGPLRVTSAMLPGLRQGA- 63

Query: 166 GIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
            + R    VA++++R+GS+  N  GG ++YR SKAALN
Sbjct: 64  -LRR----VAHVTSRMGSLAANTDGGAYAYRMSKAALN 96

Cell-cell signaling protein required for fruiting body morphogenesis. Necessary for cellular aggregation, for spore differentiation, and for gene expression that is initiated after 6 hour of starvation.

Myxococcus xanthus (taxid: 34)

>sp|Q6WAU1|IPIPR_MENPI (-)-isopiperitenone reductase OS=Mentha piperita PE=1 SV=1

 Score = 50.4 bits (119), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 6/91 (6%)

Query: 31  SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP----NGATGLLDLKNRFPERLDVLQL 86
           +LV GA++GIG E  +QL EK     VI T RN          LL   N    RL   QL
Sbjct: 8   ALVTGANKGIGFEICRQLAEKGI--IVILTSRNEKRGLEARQKLLKELNVSENRLVFHQL 65

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           D+T  +++ A A  IK K+G L++L+N +G+
Sbjct: 66  DVTDLASVAAVAVFIKSKFGKLDILVNNAGV 96

Monoterpene synthase that catalyzes the specific reduction of the 1(2)-double bond of (-)-isopiperitenone to produce (+)-cis-isopulegone. Does not catalyze the reverse reaction. Unable to reduce (+)-pulegone, (+)-cis-isopulegone, (-)-menthone or the 1,2-double bond of (-)-carvone. Able to utilize NADH with 20% the efficiency of NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|Q9KQH7|FABG_VIBCH 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabG PE=1 SV=2

 Score = 50.4 bits (119), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 5/91 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +    + L
Sbjct: 4   EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGMAL 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N +GI
Sbjct: 59  NVTNPESIEAVLKAITDEFGGVDILVNNAGI 89

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
224115622	279	predicted protein [Populus trichocarpa]	0.971	0.745	0.794	7e-89
359483478	289	PREDICTED: uncharacterized oxidoreductas	0.939	0.695	0.8	7e-86
255586225	296	short-chain dehydrogenase, putative [Ric	0.836	0.604	0.855	8e-84
449515941	289	PREDICTED: uncharacterized oxidoreductas	0.990	0.733	0.730	2e-81
449435932	275	PREDICTED: uncharacterized oxidoreductas	0.901	0.701	0.774	2e-79
297804086	298	short-chain dehydrogenase/reductase fami	0.939	0.674	0.753	6e-78
30685197	298	Rossmann-fold NAD(P)-binding domain-cont	0.836	0.600	0.805	3e-77
356529026	287	PREDICTED: uncharacterized oxidoreductas	0.934	0.696	0.721	2e-75
255646970	291	unknown [Glycine max]	0.971	0.714	0.706	7e-75
356555952	291	PREDICTED: uncharacterized oxidoreductas	0.971	0.714	0.706	1e-74

>gi|224115622|ref|XP_002317081.1| predicted protein [Populus trichocarpa] gi|222860146|gb|EEE97693.1| predicted protein [Populus trichocarpa]

 Score =  332 bits (851), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 170/214 (79%), Positives = 190/214 (88%), Gaps = 6/214 (2%)

Query: 1   MANSLFAFRSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT 60
           MA  L AFRSIR+  F   AS+ +KW+GGVS+VQGASRGIGLEF KQLLEKNDKG VIAT
Sbjct: 1   MATPL-AFRSIRRACF---ASSGLKWEGGVSMVQGASRGIGLEFVKQLLEKNDKGHVIAT 56

Query: 61  CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSI 120
           CRNPNGATGL+DLKN+F ERL+++ +DLT+ESTIEASAK I+EKYGSLNLLINASGILSI
Sbjct: 57  CRNPNGATGLVDLKNKFAERLNIMPIDLTIESTIEASAKFIREKYGSLNLLINASGILSI 116

Query: 121 PNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSA 179
           PNVLQPETTL+KVE+SSLMLAYEVNAVGPIL IKHM PLLK  GG G ERDVAVVANLSA
Sbjct: 117 PNVLQPETTLSKVERSSLMLAYEVNAVGPILAIKHMWPLLKAGGGFGTERDVAVVANLSA 176

Query: 180 RVGSIGDNRLGGWHSYRASKAALNQ-CKILAMDF 212
           RVGSIGDN LGGWHSYR+SKAALNQ  K ++++F
Sbjct: 177 RVGSIGDNHLGGWHSYRSSKAALNQLTKTVSVEF 210

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483478|ref|XP_002269427.2| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Vitis vinifera] gi|297740911|emb|CBI31093.3| unnamed protein product [Vitis vinifera]

 Score =  322 bits (825), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 164/205 (80%), Positives = 186/205 (90%), Gaps = 4/205 (1%)

Query: 10  SIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69
           S+R+ A  S+ SA VKW+GGVS+VQGASRGIGLEF KQLLEKN+KG VIATCRNP+GAT 
Sbjct: 18  SVRR-ALLSTCSA-VKWEGGVSMVQGASRGIGLEFVKQLLEKNEKGHVIATCRNPDGATA 75

Query: 70  LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
           LLDLKN F ERL++LQLDLT+ESTIEASA SI+E+YGSLNLLINASGILSIPN+LQPETT
Sbjct: 76  LLDLKNEFAERLNILQLDLTIESTIEASANSIRERYGSLNLLINASGILSIPNILQPETT 135

Query: 130 LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNR 188
           L+KV+KSSL+LAYEVNAVGPILVIKHM PLL   GG+G ERDVAVVANLSARVGSIGDNR
Sbjct: 136 LSKVQKSSLLLAYEVNAVGPILVIKHMWPLLTAGGGSGTERDVAVVANLSARVGSIGDNR 195

Query: 189 LGGWHSYRASKAALNQ-CKILAMDF 212
           LGGWHSYR+SKAALNQ  K ++++F
Sbjct: 196 LGGWHSYRSSKAALNQLTKTISVEF 220

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586225|ref|XP_002533767.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223526304|gb|EEF28612.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  315 bits (807), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 154/180 (85%), Positives = 171/180 (95%), Gaps = 1/180 (0%)

Query: 26  WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           W+GGVS+VQGASRGIGL+F KQLLEK++KG VIATCRNP+GATGLLDLKN+F ERL++ Q
Sbjct: 39  WEGGVSMVQGASRGIGLQFVKQLLEKDEKGHVIATCRNPDGATGLLDLKNKFDERLNIQQ 98

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LDLT+ES+IEASA +I+EKYGSLNLLINASGILSIPN+LQPETTLNKVEKSSLMLAYEVN
Sbjct: 99  LDLTIESSIEASATAIREKYGSLNLLINASGILSIPNLLQPETTLNKVEKSSLMLAYEVN 158

Query: 146 AVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           AVGPILVIKHM PLLK  GG+G +RDVAVVANLSARVGSIGDNRLGGWHSYR+SKAALNQ
Sbjct: 159 AVGPILVIKHMWPLLKAGGGSGTQRDVAVVANLSARVGSIGDNRLGGWHSYRSSKAALNQ 218

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515941|ref|XP_004165006.1| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Cucumis sativus]

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 157/215 (73%), Positives = 185/215 (86%), Gaps = 3/215 (1%)

Query: 1   MANSLFAFRSIRKVA-FTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA 59
           + + +FA R++R  A   + +S S KW+GGVS+VQGASRGIGLEF K LLEKN+KG V+A
Sbjct: 6   LNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEKGHVVA 65

Query: 60  TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILS 119
           TCRNP  ATGLL+LKN+F ERL +LQLD+T E+TI+ASAKSI+E+YGSLNLLINASGILS
Sbjct: 66  TCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKASAKSIEERYGSLNLLINASGILS 125

Query: 120 IPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLS 178
           IPNV+QPETTL KVEKSSL+ AYEVNAVGPILVIKH+ P LK  GG+G ER+VAVVANLS
Sbjct: 126 IPNVIQPETTLYKVEKSSLLHAYEVNAVGPILVIKHLWPFLKAGGGSGTEREVAVVANLS 185

Query: 179 ARVGSIGDNRLGGWHSYRASKAALNQ-CKILAMDF 212
           ARVGSIGDNRLGGWHSYRASK ALNQ  K ++++F
Sbjct: 186 ARVGSIGDNRLGGWHSYRASKTALNQLTKNVSVEF 220

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435932|ref|XP_004135748.1| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Cucumis sativus]

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 151/195 (77%), Positives = 174/195 (89%), Gaps = 2/195 (1%)

Query: 20  ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE 79
           A  ++KW+GGVS+VQGASRGIGLEF K LLEKN+KG V+ATCRNP  ATGLL+LKN+F E
Sbjct: 12  APRTLKWEGGVSMVQGASRGIGLEFVKHLLEKNEKGHVVATCRNPGQATGLLELKNKFDE 71

Query: 80  RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
           RL +LQLD+T E+TI+ASAKSI+E+YGSLNLLINASGILSIPNV+QPETTL KVEKSSL+
Sbjct: 72  RLCILQLDVTNETTIKASAKSIEERYGSLNLLINASGILSIPNVIQPETTLYKVEKSSLL 131

Query: 140 LAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
            AYEVNAVGPILVIKH+ P LK  GG+G ER+VAVVANLSARVGSIGDNRLGGWHSYRAS
Sbjct: 132 HAYEVNAVGPILVIKHLWPFLKAGGGSGTEREVAVVANLSARVGSIGDNRLGGWHSYRAS 191

Query: 199 KAALNQ-CKILAMDF 212
           K ALNQ  K ++++F
Sbjct: 192 KTALNQLTKNVSVEF 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297804086|ref|XP_002869927.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297315763|gb|EFH46186.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 153/203 (75%), Positives = 176/203 (86%), Gaps = 2/203 (0%)

Query: 4   SLFAFRSIRKVAF-TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR 62
           ++ A R +R  A  TSS+S+  KW+GGVS+VQGASRGIGLEF +QLL  N+KG V+ATCR
Sbjct: 18  AVVALRKMRVSALATSSSSSFPKWEGGVSMVQGASRGIGLEFVRQLLGNNEKGYVVATCR 77

Query: 63  NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPN 122
           NP  AT L DLKNRF ERL + +LD+T E+TIE SA+S++E+YGSLNLLINA+GILSIP+
Sbjct: 78  NPKEATSLSDLKNRFSERLFIQKLDVTDETTIEESAESVRERYGSLNLLINAAGILSIPS 137

Query: 123 VLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARV 181
           VLQPETTLNKVEKSSLMLAYEVNAVGPILV+KHM PLLK  GG+G ER+VAVVANLSARV
Sbjct: 138 VLQPETTLNKVEKSSLMLAYEVNAVGPILVMKHMWPLLKAGGGSGTEREVAVVANLSARV 197

Query: 182 GSIGDNRLGGWHSYRASKAALNQ 204
           GSIGDNRLGGWHSYRASK ALNQ
Sbjct: 198 GSIGDNRLGGWHSYRASKTALNQ 220

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30685197|ref|NP_193808.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|15450423|gb|AAK96505.1| AT4g20760/F21C20_110 [Arabidopsis thaliana] gi|23507787|gb|AAN38697.1| At4g20760/F21C20_110 [Arabidopsis thaliana] gi|332658958|gb|AEE84358.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  293 bits (750), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 145/180 (80%), Positives = 161/180 (89%), Gaps = 1/180 (0%)

Query: 26  WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           WKGGVS+VQGASRGIGLEF +QLLE N  G V+ATCRNP  AT L DLKNRF ERL + +
Sbjct: 41  WKGGVSMVQGASRGIGLEFVRQLLENNKNGYVVATCRNPKEATSLSDLKNRFSERLFIQK 100

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LD+T E+TIE SA+S++EKYGSLNLLINA+GILSIP VLQPETTLNKVEKSSLMLAYEVN
Sbjct: 101 LDVTDETTIEESAESVREKYGSLNLLINAAGILSIPGVLQPETTLNKVEKSSLMLAYEVN 160

Query: 146 AVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           AVGPILV+KHM PLLK  GG+G +R+VAVVANLSARVGSIGDNRLGGWHSYRASK+ALNQ
Sbjct: 161 AVGPILVMKHMWPLLKAGGGSGTDREVAVVANLSARVGSIGDNRLGGWHSYRASKSALNQ 220

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529026|ref|XP_003533098.1| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Glycine max]

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 148/205 (72%), Positives = 173/205 (84%), Gaps = 5/205 (2%)

Query: 10  SIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69
           S+ + AF+SS S+   ++GGVS+VQGASRGIGLEF KQ+LE +DK  VIATCRNP+ +TG
Sbjct: 17  SLTRRAFSSSPSS---FQGGVSMVQGASRGIGLEFVKQILEYDDKEHVIATCRNPSASTG 73

Query: 70  LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
           L+ LK++F +RL +L LDLTVE++IEASA SIKE YG LNLLINASGILSIP V+ PETT
Sbjct: 74  LIHLKDKFADRLKILSLDLTVETSIEASALSIKETYGRLNLLINASGILSIPEVMHPETT 133

Query: 130 LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNR 188
           LNKVEKSSLMLAYEVNAVGPILVIKHM PLLKV GG G  R  AVVA+LSARV SIGDNR
Sbjct: 134 LNKVEKSSLMLAYEVNAVGPILVIKHMWPLLKVGGGHGTGRSAAVVASLSARVASIGDNR 193

Query: 189 LGGWHSYRASKAALNQ-CKILAMDF 212
           LGGWHSYR+SKA+LNQ  K  +++F
Sbjct: 194 LGGWHSYRSSKASLNQLSKTASLEF 218

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255646970|gb|ACU23954.1| unknown [Glycine max]

 Score =  285 bits (730), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 149/211 (70%), Positives = 174/211 (82%), Gaps = 3/211 (1%)

Query: 5   LFAFRSIRKVAFTSSASASVKWKG-GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63
           + A  S R ++ T  A +S  ++G GVS+VQGASRGIGLEF KQLLE +DK  VIATCRN
Sbjct: 12  MMASHSPRILSLTRRAFSSCSFQGEGVSMVQGASRGIGLEFVKQLLENDDKEHVIATCRN 71

Query: 64  PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV 123
           P+ +TGL+ LK++F +RL +L LDLTVE++IEASA SI+E YG LNLLINASGILSIP V
Sbjct: 72  PSASTGLIHLKDKFADRLRILPLDLTVENSIEASALSIRETYGHLNLLINASGILSIPEV 131

Query: 124 LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVG 182
           + PETTLNKVEKSSLMLAYEVNAVGPILVIKHM PLLKV GG G  R  AVVA+LSARV 
Sbjct: 132 IHPETTLNKVEKSSLMLAYEVNAVGPILVIKHMWPLLKVGGGHGTGRSAAVVASLSARVA 191

Query: 183 SIGDNRLGGWHSYRASKAALNQ-CKILAMDF 212
           SIGDNRLGGWHSYR+SKAALNQ  K ++++F
Sbjct: 192 SIGDNRLGGWHSYRSSKAALNQLSKTVSLEF 222

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555952|ref|XP_003546293.1| PREDICTED: uncharacterized oxidoreductase C663.09c-like [Glycine max]

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 149/211 (70%), Positives = 174/211 (82%), Gaps = 3/211 (1%)

Query: 5   LFAFRSIRKVAFTSSASASVKWKG-GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN 63
           + A  S R ++ T  A +S  ++G GVS+VQGASRGIGLEF KQLLE +DK  VIATCRN
Sbjct: 12  MMASHSPRILSLTRRAFSSCSFQGEGVSMVQGASRGIGLEFVKQLLENDDKEHVIATCRN 71

Query: 64  PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV 123
           P+ +TGL+ LK++F +RL +L LDLTVE++IEASA SI+E YG LNLLINASGILSIP V
Sbjct: 72  PSASTGLIHLKDKFADRLRILPLDLTVENSIEASALSIRETYGRLNLLINASGILSIPEV 131

Query: 124 LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVG 182
           + PETTLNKVEKSSLMLAYEVNAVGPILVIKHM PLLKV GG G  R  AVVA+LSARV 
Sbjct: 132 IHPETTLNKVEKSSLMLAYEVNAVGPILVIKHMWPLLKVGGGHGTGRSAAVVASLSARVA 191

Query: 183 SIGDNRLGGWHSYRASKAALNQ-CKILAMDF 212
           SIGDNRLGGWHSYR+SKAALNQ  K ++++F
Sbjct: 192 SIGDNRLGGWHSYRSSKAALNQLSKTVSLEF 222

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
TAIR|locus:2121469	298	AT4G20760 [Arabidopsis thalian	0.925	0.664	0.755	1.1e-73
ZFIN|ZDB-GENE-040426-1502	262	zgc:65997 "zgc:65997" [Danio r	0.803	0.656	0.445	1.2e-33
ZFIN|ZDB-GENE-050419-83	256	si:dkey-12e7.4 "si:dkey-12e7.4	0.813	0.679	0.350	1e-20
ZFIN|ZDB-GENE-050417-323	255	zgc:110339 "zgc:110339" [Danio	0.831	0.698	0.356	3.5e-20
UNIPROTKB|G5EI10	276	MGCH7_ch7g551 "Short-chain deh	0.803	0.623	0.333	7.2e-20
UNIPROTKB|F1N9C1	254	LOC415661 "Uncharacterized pro	0.766	0.645	0.394	4e-19
UNIPROTKB|F1NFS8	279	LOC100857820 "Uncharacterized	0.757	0.580	0.385	8.3e-19
UNIPROTKB|F1N9B0	263	LOC769608 "Uncharacterized pro	0.757	0.615	0.374	7.5e-18
WB|WBGene00008986	249	F20G2.2 [Caenorhabditis elegan	0.799	0.686	0.335	6.7e-17
UNIPROTKB|F1NGX9	415	F1NGX9 "Uncharacterized protei	0.761	0.392	0.382	7.5e-17

TAIR|locus:2121469 AT4G20760 [Arabidopsis thaliana (taxid:3702)]

 Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
 Identities = 151/200 (75%), Positives = 172/200 (86%)

Query:     7 AFRSIRKVAFTSSASASV-KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN 65
             A + +R     +S+S+SV  WKGGVS+VQGASRGIGLEF +QLLE N  G V+ATCRNP 
Sbjct:    21 ALKRMRVSGLATSSSSSVPNWKGGVSMVQGASRGIGLEFVRQLLENNKNGYVVATCRNPK 80

Query:    66 GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ 125
              AT L DLKNRF ERL + +LD+T E+TIE SA+S++EKYGSLNLLINA+GILSIP VLQ
Sbjct:    81 EATSLSDLKNRFSERLFIQKLDVTDETTIEESAESVREKYGSLNLLINAAGILSIPGVLQ 140

Query:   126 PETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSI 184
             PETTLNKVEKSSLMLAYEVNAVGPILV+KHM PLLK GG +G +R+VAVVANLSARVGSI
Sbjct:   141 PETTLNKVEKSSLMLAYEVNAVGPILVMKHMWPLLKAGGGSGTDREVAVVANLSARVGSI 200

Query:   185 GDNRLGGWHSYRASKAALNQ 204
             GDNRLGGWHSYRASK+ALNQ
Sbjct:   201 GDNRLGGWHSYRASKSALNQ 220

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0019252 "starch biosynthetic process" evidence=RCA

ZFIN|ZDB-GENE-040426-1502 zgc:65997 "zgc:65997" [Danio rerio (taxid:7955)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 81/182 (44%), Positives = 119/182 (65%)

Query:    30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
             V+LVQG+SRG+GLEF + LL       +IATCRNP+ A  L  L  +  +RL VL+LD+ 
Sbjct:     4 VALVQGSSRGLGLEFCRYLLLNKSPAAIIATCRNPDAAHELSALSAQHADRLTVLRLDVN 63

Query:    90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
              E  I+ +A+S+K  +G ++L+IN+S +L  P+  + ET+L  V    ++     N VGP
Sbjct:    64 REEDIKTAAESVKTAFGKVDLIINSSAMLH-PSG-KGETSLRDVSAQGVISTLTTNTVGP 121

Query:   150 ILVIKHMSPLLK--VGGTGI---ERDV---AVVANLSARVGSIGDNRLGGWHSYRASKAA 201
             +++ K+ +PLL+   G  G+   E+D     ++ N++ARVGSIGDN LGGW+SYR SKAA
Sbjct:   122 LVMAKYFAPLLQRGTGAFGLQPPEKDKQHNGIMVNMTARVGSIGDNALGGWYSYRMSKAA 181

Query:   202 LN 203
             LN
Sbjct:   182 LN 183

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

ZFIN|ZDB-GENE-050419-83 si:dkey-12e7.4 "si:dkey-12e7.4" [Danio rerio (taxid:7955)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 68/194 (35%), Positives = 108/194 (55%)

Query:    32 LVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
             ++ GASRG+GL+  + L+      G +IAT RNPNGA  L  L   + + + +++LD+  
Sbjct:    12 MITGASRGLGLQIVESLVTGGFSPGKIIATARNPNGAKELQRLAEEY-QNIHIIKLDVIS 70

Query:    91 ESTIEASAKSIKE--KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
             + +IE +A  ++E  +   LN LIN +GI  + N+   ET    V    ++  +  N+V 
Sbjct:    71 QESIERAAAEVEELVQEEGLNCLINNAGINVVANL---ET----VTADQMLENFHTNSVA 123

Query:   149 PILVIKHMSPLLK---VGGTGIERDVAVVANLSARVGSI----GDNR-LGGWHSYRASKA 200
             P+++ K M PLLK     GTG+    A V N+++ +GS+    GD      W+ YR SK+
Sbjct:   124 PLMITKAMLPLLKRAAAKGTGMGIHRAAVINVTSLLGSVELYWGDRADTFKWYPYRTSKS 183

Query:   201 ALNQC-KILAMDFE 213
             ALN   + LA+D E
Sbjct:   184 ALNMVTRCLAVDLE 197

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-050417-323 zgc:110339 "zgc:110339" [Danio rerio (taxid:7955)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 71/199 (35%), Positives = 112/199 (56%)

Query:    27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
             K G  L+ GASRG+GL+  KQLL   ++   +IAT RNP  A  L  L    P+ + ++ 
Sbjct:     7 KCGSVLITGASRGLGLQMVKQLLATPERPQKIIATVRNPAAAEELQKLAKAHPD-VHIVT 65

Query:    86 LDLTVESTIEASAKSIKEKYGS--LNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAY 142
             LD++ E+++ A++++++   G+  LN LIN + I LS        + L+ V +  +M  Y
Sbjct:    66 LDISNETSVNAASQAVEAIVGANGLNCLINNAAIGLS--------SDLDSVTRDVMMKTY 117

Query:   143 EVNAVGPILVIKHMSPLLK---VGGTGIERDVAVVANLSARVGSI----GDNRLGGWHSY 195
             E N V P+ V K + PLL+     G+G+    A V N+S+ +GS+    G+      ++Y
Sbjct:   118 ESNTVSPLFVTKALLPLLRRAAAEGSGMSIQRAAVVNVSSLLGSVQLNWGEGASFKSYAY 177

Query:   196 RASKAALNQC-KILAMDFE 213
             RASK+ALN   + LA D E
Sbjct:   178 RASKSALNMVTRCLAADLE 196

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|G5EI10 MGCH7_ch7g551 "Short-chain dehydrogenase/reductase SDR" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 63/189 (33%), Positives = 108/189 (57%)

Query:    31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLL--DL---KNRFPERLDVL 84
             +LV   SRGIG    + LL +     ++ATCR+ P+G    L  DL   ++    RL + 
Sbjct:     6 ALVCPTSRGIGHHLTRALLRRTTLP-ILATCRSDPDGTKSALLADLPGDESSLSSRLHMA 64

Query:    85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             ++D+T E ++ A+A+S   K+       +     ++P VL+ +  +  V+ +  + ++ +
Sbjct:    65 RIDVTDEDSVRAAAESCASKHFPREGGHHLRLAFALPGVLRVDKAVEHVDYAQTLDSFRI 124

Query:   145 NAVGPILVIKHMSPLLKVG----GT--GIERDV----AVVANLSARVGSIGDNRLGGWHS 194
             N +GP++++KH +  L  G    G+  G ++ V    +V  N+SARVGS+ DNR GGW++
Sbjct:   125 NTLGPLMLMKHFARFLPRGRSDMGSEGGDDKGVLPNHSVWVNMSARVGSVQDNRQGGWYT 184

Query:   195 YRASKAALN 203
             YRASKAA+N
Sbjct:   185 YRASKAAVN 193

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1N9C1 LOC415661 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 73/185 (39%), Positives = 101/185 (54%)

Query:    32 LVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDL 88
             LV GA+RGIGL F + LL   N    V ATCR+P G  A  L  L ++ P  L ++ L++
Sbjct:     5 LVTGANRGIGLGFVQHLLALSNPPEWVFATCRDPKGQRAQELQKLASKHPN-LVIVPLEV 63

Query:    89 TVESTIEASAKSIKEKY-GS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
             T  ++I+A+A S+ E+  GS LNLLIN +GI    N +  ET  +  E       Y  N 
Sbjct:    64 TDPASIKAAAASVGERLKGSGLNLLINNAGIARA-NTIDNETLKDMSE------VYTTNT 116

Query:   147 VGPILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRL---GGWHSYRAS 198
             + P+L+ +   P+LK       G+G+    A + N+S+  GSI D  L   G   SYR S
Sbjct:   117 IAPLLLSQAFLPMLKKAAQENPGSGLSCSKAAIINISSTAGSIQDLYLWQYGQALSYRCS 176

Query:   199 KAALN 203
             KAALN
Sbjct:   177 KAALN 181

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1NFS8 LOC100857820 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 72/187 (38%), Positives = 102/187 (54%)

Query:    32 LVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDL 88
             LV GA+RGIGL   + LL   N    V ATCR+P G  A  L  L ++ P  L ++ L++
Sbjct:    30 LVTGANRGIGLGLVQHLLALPNPPEWVFATCRDPKGQRAQELQKLASKHPN-LVIVPLEV 88

Query:    89 TVESTIEASAKSIKEKY-GS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
             T  ++I+A+A S+ E+  GS LNLLIN +G+L+  N L+ ET         ++  Y  N 
Sbjct:    89 TDPASIKAAAASVGERLKGSGLNLLINNAGVLNA-NTLETETL------KDMLHVYTTNT 141

Query:   147 VGPILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWH-----SYR 196
             + P+L+ +   PLLK       G+G+    A + N+S+  GSI    L GW      SYR
Sbjct:   142 IAPLLLSQAFLPLLKKAAQESPGSGMSCSKAAIVNISSIGGSISS--LTGWDVMELVSYR 199

Query:   197 ASKAALN 203
              SKAA N
Sbjct:   200 CSKAAQN 206

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1N9B0 LOC769608 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 70/187 (37%), Positives = 101/187 (54%)

Query:    32 LVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDL 88
             LV G +RGIGL   + LL   N    V ATCR+P G  A  L  L ++ P  L ++ L++
Sbjct:    14 LVTGGNRGIGLGLVQHLLALPNPPEWVFATCRDPKGQRAQELQKLASKHPN-LVIVPLEV 72

Query:    89 TVESTIEASAKSIKEKY-GS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
             T  ++I+A+A S+ E+  GS LNLLIN +G+L+  N L+ ET         ++  Y  N 
Sbjct:    73 TDPASIKAAAASVGERLKGSGLNLLINNAGVLNA-NTLETETL------KDMLHVYTTNT 125

Query:   147 VGPILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWHS-----YR 196
             + P+L+ +   PLLK       G+G+    A + N+S+  GSI +  L  W S     YR
Sbjct:   126 IAPLLLSQAFLPLLKKAAQESPGSGMSCSKAAIINMSSTAGSIKEVFL--WESAQCISYR 183

Query:   197 ASKAALN 203
              SKAA N
Sbjct:   184 CSKAAQN 190

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

WB|WBGene00008986 F20G2.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 64/191 (33%), Positives = 100/191 (52%)

Query:    32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
             L+ GA+RGIGL   KQ L+  D   +IATCR+P+ A  L +LK+    RL +L LD+  +
Sbjct:     7 LITGANRGIGLGLLKQFLKHKDIQIIIATCRDPSKAEELSNLKD---SRLHILPLDIDCD 63

Query:    92 STIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
              +I      +++  G   L +L+N +GIL +P  ++ E       + +L+   E N+V  
Sbjct:    64 ESISKLYAEVEKLVGEDGLTVLLNNAGIL-LPYDVEGEKN-----RKTLIRQLETNSVST 117

Query:   150 ILVIKHMSPLLKV-----GGTGIERDVAVVANLSARVGSIG--DNRLGG-WHSYRASKAA 201
              L+ +   PLLK      GG G   + A + N+S+   S+   D    G   +YR SK+A
Sbjct:   118 ALITQEFLPLLKKAAAKNGGDGYSINRAAIVNISSTAASVEKIDGTFNGPLVAYRMSKSA 177

Query:   202 LNQ-CKILAMD 211
             LN   K  ++D
Sbjct:   178 LNSFAKSCSID 188

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1NGX9 F1NGX9 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 213 (80.0 bits), Expect = 7.5e-17, P = 7.5e-17
 Identities = 72/188 (38%), Positives = 102/188 (54%)

Query:    31 SLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLD 87
             +LV GA+RGIGL F + LL   N    V A CR+P G  A  L  L ++ P  L ++ L+
Sbjct:     6 ALVTGANRGIGLGFVQHLLALPNPPEWVFAGCRDPKGQRAQELQKLASKHPN-LVIVPLE 64

Query:    88 LTVESTIEASAKSIKEKY-GS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
             +T  ++I+A+A S+ E+  GS LNLLIN +GI+   N L+ ET  +  E       Y  N
Sbjct:    65 VTDPASIKAAAASVGERLKGSGLNLLINNAGIVRA-NRLENETLKDMSE------VYTTN 117

Query:   146 AVGPILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWHS-----Y 195
              + P+L+ +   PLLK       G+G+    A + N+S+  GSI +  L  W       Y
Sbjct:   118 TIAPLLLGQAFLPLLKKAAQESPGSGMSCSKAAIVNISSNGGSIKEVYL--WEGIQAACY 175

Query:   196 RASKAALN 203
             R SKAALN
Sbjct:   176 RCSKAALN 183

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	214
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-54
PRK09009	235	PRK09009, PRK09009, C factor cell-cell signaling p	2e-30
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	6e-26
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	1e-23
cd05233	234	cd05233, SDR_c, classical (c) SDRs	3e-21
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	9e-17
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-16
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-15
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-15
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	3e-15
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	4e-15
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	8e-15
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	1e-13
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	8e-13
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-12
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	5e-12
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	9e-12
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	1e-11
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-11
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	4e-11
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	8e-11
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	9e-11
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	9e-11
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-11
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	1e-10
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	2e-10
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-10
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	4e-10
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	6e-10
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-10
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-09
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-09
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-09
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-09
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-09
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	2e-09
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	7e-09
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	9e-09
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-08
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-08
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-08
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	2e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	2e-08
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-08
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-08
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-08
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	3e-08
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	4e-08
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-08
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-08
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-07
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	2e-07
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-07
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	3e-07
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	3e-07
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	4e-07
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	4e-07
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	5e-07
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	6e-07
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	6e-07
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-07
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	7e-07
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	7e-07
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	8e-07
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	8e-07
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-06
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	1e-06
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-06
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-06
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-06
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-06
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-06
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-06
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-06
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	3e-06
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	3e-06
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	4e-06
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	4e-06
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	7e-06
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	9e-06
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-05
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-05
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-05
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-05
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-05
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	3e-05
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	3e-05
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	3e-05
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	4e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	4e-05
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	4e-05
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-05
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-05
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	6e-05
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	8e-05
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	8e-05
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-04
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-04
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	1e-04
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	1e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	2e-04
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-04
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-04
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-04
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-04
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	2e-04
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	3e-04
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	3e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-04
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	4e-04
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	4e-04
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	6e-04
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	6e-04
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	9e-04
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	0.001
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	0.001
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	0.001
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	0.001
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	0.001
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	0.001
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	0.001
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	0.002
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	0.002
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	0.002
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	0.002
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	0.002
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	0.002
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	0.002
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	0.003
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	0.003
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	0.003
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	0.004
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	0.004
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	0.004

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score =  173 bits (441), Expect = 2e-54
 Identities = 80/185 (43%), Positives = 111/185 (60%), Gaps = 19/185 (10%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ GASRGIGLE  +QLL       VIATCR+P+ AT L  L      RL +L+LD+T  
Sbjct: 2   LITGASRGIGLELVRQLLA-RGNNTVIATCRDPSAATELAALGASHS-RLHILELDVT-- 57

Query: 92  STIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
             I  SA+++ E+ G   L++LIN +GIL            ++V+   L+  ++VN +GP
Sbjct: 58  DEIAESAEAVAERLGDAGLDVLINNAGILH------SYGPASEVDSEDLLEVFQVNVLGP 111

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-CKIL 208
           +L+ +   PLL  G        A + N+S+RVGSIGDN  GGW+SYRASKAALN   K L
Sbjct: 112 LLLTQAFLPLLLKGAR------AKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSL 165

Query: 209 AMDFE 213
           A++ +
Sbjct: 166 AVELK 170

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional

 Score =  111 bits (280), Expect = 2e-30
 Identities = 64/174 (36%), Positives = 91/174 (52%), Gaps = 23/174 (13%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRN--PNGATGLLDLKNRFPERLDVLQLDLT 89
           L+ G S GIG    KQLLE+     V AT R+  P+             + +    LD+T
Sbjct: 4   LIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQH----------DNVQWHALDVT 53

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            E+ I    K + E++  L+ LIN  G+L   +   PE +L  ++    +    +N +  
Sbjct: 54  DEAEI----KQLSEQFTQLDWLINCVGMLHTQD-KGPEKSLQALDADFFLQNITLNTLPS 108

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +L+ KH +P LK        + A  A +SA+VGSI DNRLGGW+SYRASKAALN
Sbjct: 109 LLLAKHFTPKLKQS------ESAKFAVISAKVGSISDNRLGGWYSYRASKAALN 156

Length = 235

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  100 bits (251), Expect = 6e-26
 Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 21/173 (12%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ G S GIGL  A  L  +  +  VIAT RNP     L  L     + L+VL+LD+T E
Sbjct: 4   LITGCSSGIGLALALALAAQGYR--VIATARNP---DKLESLGELLNDNLEVLELDVTDE 58

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
            +I+A+ K + E++G +++L+N +G      +   ET++ +V +      +EVN  GP+ 
Sbjct: 59  ESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLE--ETSIEEVREL-----FEVNVFGPLR 111

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           V +   PL+       ++    + N+S+  G +    LG    Y ASKAAL  
Sbjct: 112 VTRAFLPLM------RKQGSGRIVNVSSVAGLVPTPFLG---PYCASKAALEA 155

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 93.8 bits (234), Expect = 1e-23
 Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 25/187 (13%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV--LQLD 87
           V+LV GA+RGIG E  +QL +    G VI T R+     G   ++    E L V   QLD
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGP-GTVILTARDVE--RGQAAVEKLRAEGLSVRFHQLD 58

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T +++IEA+A  ++EKYG L++L+N +GI +         T  +  ++      + N  
Sbjct: 59  VTDDASIEAAADFVEEKYGGLDILVNNAGI-AFKGFDDSTPTREQARET-----MKTNFF 112

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-CK 206
           G + V + + PLLK      +     + N+S+ +GS+         +Y  SKAALN   +
Sbjct: 113 GTVDVTQALLPLLK------KSPAGRIVNVSSGLGSL-------TSAYGVSKAALNALTR 159

Query: 207 ILAMDFE 213
           ILA + +
Sbjct: 160 ILAKELK 166

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 87.3 bits (217), Expect = 3e-21
 Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 20/182 (10%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           LV GAS GIG   A++L  +  K  V+   RN      L  ++         +Q D++ E
Sbjct: 2   LVTGASSGIGRAIARRLAREGAK--VVLADRNEEALAELAAIE-ALGGNAVAVQADVSDE 58

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
             +EA  +   E++G L++L+N +GI     +   E T    ++       +VN  G  L
Sbjct: 59  EDVEALVEEALEEFGRLDILVNNAGIARPGPLE--ELTDEDWDR-----VLDVNLTGVFL 111

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-CKILAM 210
           + +   P +K  G G       + N+S+  G      L G  +Y ASKAAL    + LA+
Sbjct: 112 LTRAALPHMKKQGGG------RIVNISSVAGLRP---LPGQAAYAASKAALEGLTRSLAL 162

Query: 211 DF 212
           + 
Sbjct: 163 EL 164

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 76.0 bits (187), Expect = 9e-17
 Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 21/189 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
            G V+LV GAS GIG   A+ L  +  +  V A       A  L   +K     R   + 
Sbjct: 4   SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVA 63

Query: 86  LDLT-VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            D++  E ++EA   + +E++G +++L+N +GI        P+  L ++ +       +V
Sbjct: 64  ADVSDDEESVEALVAAAEEEFGRIDILVNNAGI------AGPDAPLEELTEEDWDRVIDV 117

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N +G  L+ +   PL+K            + N+S+  G  G     G  +Y ASKAAL  
Sbjct: 118 NLLGAFLLTRAALPLMKKQ---------RIVNISSVAGLGG---PPGQAAYAASKAALIG 165

Query: 205 C-KILAMDF 212
             K LA++ 
Sbjct: 166 LTKALALEL 174

Length = 251

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 75.4 bits (186), Expect = 2e-16
 Identities = 57/177 (32%), Positives = 77/177 (43%), Gaps = 27/177 (15%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
           L+ G   G G   AK+L   +  G  V+A C   NG  G  +L+    +RL  LQLD+T 
Sbjct: 4   LITGCDSGFGNLLAKKL---DSLGFTVLAGCLTKNGP-GAKELRRVCSDRLRTLQLDVTK 59

Query: 91  ESTIEASAKSIKEKYGSLNL--LINASGILSIPNV--LQPETTLNKVEKSSLMLAYEVNA 146
              I+ +A+ +KE  G   L  L+N +GIL       L P     K          EVN 
Sbjct: 60  PEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKC--------MEVNL 111

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
            G + V K   PLL+       R    V N+S+  G +     G    Y ASKAA+ 
Sbjct: 112 FGTVEVTKAFLPLLR-------RAKGRVVNVSSMGGRVPFPAGGA---YCASKAAVE 158

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 72.6 bits (179), Expect = 1e-15
 Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 27/176 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG V LV GA+RGIG  F +QLL +     V A  R+P   T           R+  LQL
Sbjct: 5   KGKVVLVTGANRGIGRAFVEQLLAR-GAAKVYAAARDPESVTD-------LGPRVVPLQL 56

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T  +++ A+A    E    + +L+N +GI    ++L            +L    E N 
Sbjct: 57  DVTDPASVAAAA----EAASDVTILVNNAGIFRTGSLLLEGDE------DALRAEMETNY 106

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            GP+ + +  +P+L   G G     A+V  LS  V S  +    G  +Y ASKAA 
Sbjct: 107 FGPLAMARAFAPVLAANGGG-----AIVNVLS--VLSWVNFPNLG--TYSASKAAA 153

Length = 238

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 71.6 bits (176), Expect = 2e-15
 Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 25/174 (14%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ GASRG+GL    +LLE      V AT R P   T L  L     E+LD+        
Sbjct: 5   LIIGASRGLGLGLVDRLLE--RGWQVTATVRGPQQDTALQALPGVHIEKLDMND------ 56

Query: 92  STIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
               AS   + ++      +LL   +GI    +  Q        E   L L    NA+ P
Sbjct: 57  ---PASLDQLLQRLQGQRFDLLFVNAGISGPAH--QSAADATAAEIGQLFLT---NAIAP 108

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           I + + +          +     V+A +S+++GS+     G    Y+ASKAALN
Sbjct: 109 IRLARRLLGQ-------VRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALN 155

Length = 225

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 72.3 bits (178), Expect = 3e-15
 Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 24/185 (12%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFP-ERLDVLQ 85
           G V ++ GA+ GIG E A++L ++     VI  CRN   G     ++K      +++V+Q
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAH--VIIACRNEEKGEEAAAEIKKETGNAKVEVIQ 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LDL+  +++   A+    ++  L++LIN +GI++ P       T +  E   L  A  VN
Sbjct: 59  LDLSSLASVRQFAEEFLARFPRLDILINNAGIMAPPR----RLTKDGFE---LQFA--VN 109

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN--------RLGGWHSYRA 197
            +G  L+   + P+LK       R +  V++++ R G I  N            + +Y  
Sbjct: 110 YLGHFLLTNLLLPVLKASAPS--R-IVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQ 166

Query: 198 SKAAL 202
           SK A 
Sbjct: 167 SKLAN 171

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 71.5 bits (176), Expect = 4e-15
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 20/178 (11%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
             K    L+ GAS GIG   A+ L     +  ++   RN      L   +  +P R   +
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGAR--LLLVGRNAEKLEALAA-RLPYPGRHRWV 58

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             DLT E+  EA     +E  G +N+LIN +G+            L   +  ++     +
Sbjct: 59  VADLTSEAGREAVLARARE-MGGINVLINNAGVNH-------FALLEDQDPEAIERLLAL 110

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N   P+ + + + PLL+       +  A+V N+ +  GSIG     G+ SY ASK AL
Sbjct: 111 NLTAPMQLTRALLPLLR------AQPSAMVVNVGSTFGSIG---YPGYASYCASKFAL 159

Length = 263

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 70.1 bits (172), Expect = 8e-15
 Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 23/176 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K    LV GA+RGIG  F + LL    K  V A  R+P  A     L  ++ +++  L+L
Sbjct: 2   KDKTVLVTGANRGIGKAFVESLLAHGAKK-VYAAVRDPGSAA---HLVAKYGDKVVPLRL 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T   +I+A+A   K+    ++++IN +G+L    +L+           +L    +VN 
Sbjct: 58  DVTDPESIKAAAAQAKD----VDVVINNAGVLKPATLLEEGAL------EALKQEMDVNV 107

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            G + + +  +P+LK  G G   ++  VA+L                +Y ASK+A 
Sbjct: 108 FGLLRLAQAFAPVLKANGGGAIVNLNSVASLKN---------FPAMGTYSASKSAA 154

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 1e-13
 Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 26/174 (14%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ GASRGIG EF +Q      +  VIAT R+      L  L          L LD+   
Sbjct: 5   LIVGASRGIGREFVRQYRADGWR--VIATARDAAALAALQALGAE------ALALDVADP 56

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPET-TLNKVEKSSLMLAYEVNAVGPI 150
           +++   A  +  +  +L+  +  +G      V  P T  +  + +         N +GP+
Sbjct: 57  ASVAGLAWKLDGE--ALDAAVYVAG------VYGPRTEGVEPITREDFDAVMHTNVLGPM 108

Query: 151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-NRLGGWHSYRASKAALN 203
            ++  + PL++  G        V+A LS+R+GSIGD     GW  YRASKAALN
Sbjct: 109 QLLPILLPLVEAAG-------GVLAVLSSRMGSIGDATGTTGW-LYRASKAALN 154

Length = 222

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 64.6 bits (158), Expect = 8e-13
 Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 20/171 (11%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ G + GIGL  A++ LE  +   VI T R       L + K   P  +  + LD+   
Sbjct: 9   LITGGTSGIGLALARKFLEAGNT--VIITGRRE---ERLAEAKKELPN-IHTIVLDVGDA 62

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
            ++EA A+++  +Y +L++LIN +GI    ++  P + L+K +        + N +GPI 
Sbjct: 63  ESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTE-----IDTNLIGPIR 117

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           +IK   P LK      ++  A + N+S+    +    +     Y A+KAAL
Sbjct: 118 LIKAFLPHLK------KQPEATIVNVSS---GLAFVPMAANPVYCATKAAL 159

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 21/173 (12%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V  + GASRG G  + +  LE+ D+  V+AT R+   AT L DL  ++ +RL  L LD+T
Sbjct: 5   VWFITGASRGFGRAWTEAALERGDR--VVATARDT--AT-LADLAEKYGDRLLPLALDVT 59

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
             + + A+ ++  E +G L++++N +G      +        +V +S      + N  G 
Sbjct: 60  DRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMI-------EEVTESEARAQIDTNFFGA 112

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           + V + + P L+   +G    ++ +  +SA     G         Y ASK AL
Sbjct: 113 LWVTQAVLPYLREQRSGHIIQISSIGGISA-FPMSG--------IYHASKWAL 156

Length = 275

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 63.0 bits (154), Expect = 5e-12
 Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 21/179 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLKNRFPERLDVLQ 85
           KG  +L+ GAS GIG E AKQL  +     +I   R  +    L  +L+++    ++V+ 
Sbjct: 5   KGKTALITGASSGIGAELAKQLARRGYN--LILVARREDKLEALAKELEDKTGVEVEVIP 62

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            DL+    +E     +KE+ G +++L+N +G  +    L  E +L++ E+   M+  ++N
Sbjct: 63  ADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFL--ELSLDEEEE---MI--QLN 115

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS-YRASKAALN 203
            +    + K + P +   G G      ++ N    +GS        + + Y A+KA + 
Sbjct: 116 ILALTRLTKAVLPGMVERGAG-----HII-N----IGSAAGLIPTPYMAVYSATKAFVL 164

Length = 265

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 61.9 bits (151), Expect = 9e-12
 Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 25/177 (14%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RFPERLDVLQLDLT 89
           ++ GASRGIG   A++LL++     V+   R+      L +LK   R   R+  ++ DL+
Sbjct: 3   ILTGASRGIGRALAEELLKRGSPSVVVLLARS---EEPLQELKEELRPGLRVTTVKADLS 59

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSS---LMLAYEVNA 146
             + +E   ++I++  G  +LLIN +G L           ++K+E      L   +++N 
Sbjct: 60  DAAGVEQLLEAIRKLDGERDLLINNAGSL---------GPVSKIEFIDLDELQKYFDLNL 110

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
             P+ +   +    K    G+++ V  V++ +A       N   GW  Y +SKAA +
Sbjct: 111 TSPVCLTSTLLRAFK--KRGLKKTVVNVSSGAAV------NPFKGWGLYCSSKAARD 159

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 1e-11
 Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 30/181 (16%)

Query: 31  SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT- 89
            ++ G S+G+G   A QLLEK     VI+  R  N    L  L  ++   L    LDL  
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTH--VISISRTEN--KELTKLAEQYNSNLTFHSLDLQD 59

Query: 90  ---VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
              +E+       SI+E   S   LIN +G+++      P   + K E   L+    +N 
Sbjct: 60  VHELETNFNEILSSIQEDNVSSIHLINNAGMVA------PIKPIEKAESEELITNVHLNL 113

Query: 147 VGPILVI----KHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           + P+++     KH     KV           V N+S+  G+   N   GW +Y +SKA L
Sbjct: 114 LAPMILTSTFMKHTKD-WKVDKR--------VINISS--GA-AKNPYFGWSAYCSSKAGL 161

Query: 203 N 203
           +
Sbjct: 162 D 162

Length = 251

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 18/173 (10%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           + L+ G   GIG   A +  ++  K  VI    N  GA    +   +   ++   + D++
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAK-VVILD-INEKGAEETANNVRKAGGKVHYYKCDVS 58

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
               +  +AK IK++ G + +LIN +G++S   +L  E    ++EK+     +EVN +  
Sbjct: 59  KREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLL--ELPDEEIEKT-----FEVNTLAH 111

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
               K   P +      +ER+   +  +++  G I    L     Y ASKAA 
Sbjct: 112 FWTTKAFLPDM------LERNHGHIVTIASVAGLISPAGLA---DYCASKAAA 155

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 60.1 bits (146), Expect = 4e-11
 Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 19/185 (10%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V+LV G + GIGL  AK+L  +     V+    +P  A   +    +   R   +Q D
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEG--AAVVVADIDPEIAE-KVAEAAQGGPRALGVQCD 57

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T E+ ++++ +    ++G L+++++ +GI +   +   ET+L    +S      ++N  
Sbjct: 58  VTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIA--ETSLEDWNRS-----MDINLT 110

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-CK 206
           G  LV +    ++K  G G      +V N S    + G N      +Y A+KAA     +
Sbjct: 111 GHFLVSREAFRIMKSQGIG----GNIVFNASKNAVAPGPNAA----AYSAAKAAEAHLAR 162

Query: 207 ILAMD 211
            LA++
Sbjct: 163 CLALE 167

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 59.1 bits (144), Expect = 8e-11
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+LV GASRGIG   A +L  +  K  V  T R+   A   ++           L+ D++
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAK--VAVTDRSEEAAAETVEEIKALGGNAAALEADVS 59

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGI 117
               +EA  + ++ ++G +++L+N +GI
Sbjct: 60  DREAVEALVEKVEAEFGPVDILVNNAGI 87

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 9e-11
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 21/175 (12%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLD 87
           +++V GAS G GL    +L +K     VIAT RNP     LL    +    + + V QLD
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYL--VIATMRNPEKQENLLSQATQLNLQQNIKVQQLD 62

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T +++I      +KE  G ++LL+N +G  +   V   E  + +  K      +E N  
Sbjct: 63  VTDQNSIHNFQLVLKE-IGRIDLLVNNAGYANGGFV--EEIPVEEYRKQ-----FETNVF 114

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           G I V + + P ++      ++    + N+S+  G +G   L     Y +SK AL
Sbjct: 115 GAISVTQAVLPYMR------KQKSGKIINISSISGRVGFPGLS---PYVSSKYAL 160

Length = 280

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 59.7 bits (145), Expect = 9e-11
 Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 38/210 (18%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC---VIATCRN-PNGATGLLDLKNRFPE---RLD 82
           V LV GA+ G+GL   ++LL ++D+     +I  CRN          L    P+     D
Sbjct: 3   VVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFD 62

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLN-LLINA-----SGILSIPNVL------------ 124
            + +DL+   ++ A+AK +K++Y  L+ L +NA      GI  I  +             
Sbjct: 63  YVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVTN 122

Query: 125 -----QPETTLNKVEKS---SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN 176
                Q E  L++ +K+    L   ++ N  G   +I+ + PLL     G +  +   ++
Sbjct: 123 PTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQ--IIWTSS 180

Query: 177 LSARVG--SIGD-NRLGGWHSYRASKAALN 203
           L+A     S+ D   L G   Y +SK  ++
Sbjct: 181 LNASPKYFSLEDIQHLKGPAPYSSSKYLVD 210

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 59.1 bits (144), Expect = 9e-11
 Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 19/177 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A++L  +     VI    +  GA  L+        +   +Q 
Sbjct: 4   EGKVALVTGASRGIGRAIAERLAAQGAN-VVINYASSEAGAEALVAEIGALGGKALAVQG 62

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
           D++   ++E +    K ++G +++L+N +GI     +++  E   ++V         + N
Sbjct: 63  DVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRV--------IDTN 114

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
             G   + K ++  +    +G      ++ N+S+ VG +G+       +Y ASKA +
Sbjct: 115 LTGVFNLTKAVARPMMKQRSG-----RII-NISSVVGLMGNPGQA---NYAASKAGV 162

Length = 248

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 58.5 bits (142), Expect = 1e-10
 Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 22/174 (12%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+LV GASRGIG+E A+ L     +  V    RNP     L          ++ +  D  
Sbjct: 2   VALVTGASRGIGIEIARALARDGYR--VSLGLRNPEDLAALS----ASGGDVEAVPYDAR 55

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
                 A   ++++++G +++L++ +GI       +P T       + L   + +N + P
Sbjct: 56  DPEDARALVDALRDRFGRIDVLVHNAGI------GRPTTLRE-GSDAELEAHFSINVIAP 108

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
             + + + P L+  G+G    V  + +LS   G        G   Y ASK AL 
Sbjct: 109 AELTRALLPALREAGSG---RVVFLNSLS---GKRVLAGNAG---YSASKFALR 153

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 58.6 bits (142), Expect = 2e-10
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 20/179 (11%)

Query: 24  VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV 83
           +K  G   L+ G + GIGL  AK+ LE  +   VI   RN      L + K   PE    
Sbjct: 1   MKTTGNTILITGGASGIGLALAKRFLELGNT--VIICGRN---EERLAEAKAENPEIHTE 55

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
              D+    +     + +K++Y +LN+LIN +GI    ++   E  L+  E+        
Sbjct: 56  -VCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQE-----IA 109

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            N + PI +   + P L      + +  A + N+S+    +    +     Y A+KAA+
Sbjct: 110 TNLLAPIRLTALLLPHL------LRQPEATIINVSS---GLAFVPMASTPVYCATKAAI 159

Length = 245

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 27/181 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLD--- 82
           +G V ++ GAS GIG E A  L      G  ++ + R       L ++K+   E      
Sbjct: 2   QGKVVIITGASSGIGEELAYHL---ARLGARLVLSARREER---LEEVKSECLELGAPSP 55

Query: 83  -VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
            V+ LD++     E   +   + +G L++LIN +GI S+ ++   +T+++   K  +M  
Sbjct: 56  HVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGI-SMRSLFH-DTSIDVDRK--IM-- 109

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            EVN  GP+ + K   P L     G    + VV++++ ++G      +    +Y ASK A
Sbjct: 110 -EVNYFGPVALTKAALPHLIERSQGS---IVVVSSIAGKIG------VPFRTAYAASKHA 159

Query: 202 L 202
           L
Sbjct: 160 L 160

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 58.3 bits (141), Expect = 3e-10
 Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 18/176 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +  V LV GA+ GIG    ++     D+  V+   RN   A    D           L +
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQ--VVVADRNVERARERAD---SLGPDHHALAM 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D++ E+ I    + +  ++G +++L+N +G+         +TTL +  +        +N 
Sbjct: 59  DVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFAR-----LQAINL 113

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            G  LV +    L+   G G     A + N+++  G +    L    +Y ASKAA+
Sbjct: 114 TGAYLVAREALRLMIEQGHG-----AAIVNVASGAGLVA---LPKRTAYSASKAAV 161

Length = 520

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 57.7 bits (140), Expect = 4e-10
 Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 19/180 (10%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           LV GA++GIG   A+ L E   +  V A  RN      L+    R+       +LD+   
Sbjct: 2   LVTGAAQGIGYAVARALAEAGAR--VAAVDRNFEQLLELVADLRRYGYPFATYKLDVADS 59

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
           + ++   + ++ +YG +++L+N +GIL +  +     +    + +     + VN  G   
Sbjct: 60  AAVDEVVQRLEREYGPIDVLVNVAGILRLGAID--SLSDEDWQAT-----FAVNTFGVFN 112

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-CKILAM 210
           V + +SP +K   +G    +  V + +A V  +G   +     Y ASKAAL    K L +
Sbjct: 113 VSQAVSPRMKRRRSGA---IVTVGSNAANVPRMG---MAA---YAASKAALTMLTKCLGL 163

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 56.9 bits (138), Expect = 6e-10
 Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 22/180 (12%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG----LLDLKNRFPERLDV 83
           G   L+ G S GIG   AK+L+++     VI   R+ +        +    N   +++  
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGAN--VIIVARSESKLEEAVEEIEAEANASGQKVSY 58

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
           +  DL+    +E +     EK G  +L++N +GI SIP + + + T  + E+       +
Sbjct: 59  ISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGI-SIPGLFE-DLTAEEFERG-----MD 111

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           VN  G + V   + PL+K    G    +  V++ +A VG        G+ +Y  SK AL 
Sbjct: 112 VNYFGSLNVAHAVLPLMKEQRPG---HIVFVSSQAALVGIY------GYSAYCPSKFALR 162

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.8 bits (138), Expect = 6e-10
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 23/180 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
            G V++V GAS GIG   A+ L ++   G   VIA   N   A  LL+           +
Sbjct: 4   MGKVAIVTGASGGIGRAIAELLAKE---GAKVVIAYDINEEAAQELLEEIKEEGGDAIAV 60

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           + D++ E  +E   + I EK+G +++L+N +GI +    L  + T  + ++   ++   V
Sbjct: 61  KADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNF--GLVTDMTDEEWDR---VID--V 113

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVV-ANLSARVGSIGDNRLGGWHSYRASKAALN 203
           N  G +L+ ++  P +    +G+  +++ +   + A    +          Y ASK A+N
Sbjct: 114 NLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVL----------YSASKGAVN 163

Length = 247

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 18/187 (9%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG V++V G SRGIGL  A+ L E       I     P       +L  ++  +    + 
Sbjct: 7   KGKVAIVTGGSRGIGLAIARALAE-AGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKC 65

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
           D++ + ++E + K I++ +G +++LI  +GI      L       NKV         +VN
Sbjct: 66  DVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKV--------IDVN 117

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
             G     +  + + K  G G    + + A++S  +     NR     +Y ASKAA+   
Sbjct: 118 LNGVFNCAQAAAKIFKKQGKG---SLIITASMSGTIV----NRPQPQAAYNASKAAVIHL 170

Query: 205 CKILAMD 211
            K LA++
Sbjct: 171 AKSLAVE 177

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 51/183 (27%), Positives = 76/183 (41%), Gaps = 33/183 (18%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+++ G + GIGL  AK LL+K      I       GA   L   N   +    +Q D+T
Sbjct: 2   VAIITGGASGIGLATAKLLLKKG-AKVAILDRNENPGAAAELQAINPKVKAT-FVQCDVT 59

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
               + A+ K   EK+G +++LIN +GIL   + L         EK+      +VN  G 
Sbjct: 60  SWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKT-----IDVNLTGV 114

Query: 150 I----LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS------YRASK 199
           I    L + +M      GG G      V+ N    +GS+      G +       Y ASK
Sbjct: 115 INTTYLALHYMD--KNKGGKG-----GVIVN----IGSV-----AGLYPAPQFPVYSASK 158

Query: 200 AAL 202
             +
Sbjct: 159 HGV 161

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 56.4 bits (136), Expect = 2e-09
 Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 26/177 (14%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
             V  + G +RGIG   A +     D+  ++   R+  GA  L +      E L  +Q D
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDR--LLIIDRDAEGAKKLAEALG--DEHL-SVQAD 323

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSI--PNVLQPETTLNKVEKSSLMLAYEVN 145
           +T E+ +E++   I+ ++G L++L+N +GI  +  P++ Q      +V        Y+VN
Sbjct: 324 ITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRV--------YDVN 375

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
             G     +  + L+  GG        V+ NL +    +    L   ++Y ASKAA+
Sbjct: 376 LSGAFACARAAARLMSQGG--------VIVNLGSIASLLA---LPPRNAYCASKAAV 421

Length = 520

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 24/180 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQ 85
           KG V+L+ GAS GIG   A+ L E   K  V+   R       L  L +         L 
Sbjct: 5   KGKVALITGASSGIGEATARALAEAGAK--VVLAARR---EERLEALADEIGAGAALALA 59

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LD+T  + +EA+ +++ E++G +++L+N +G+        P    + ++    M+  + N
Sbjct: 60  LDVTDRAAVEAAIEALPEEFGRIDILVNNAGLAL----GDPLDEAD-LDDWDRMI--DTN 112

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS-YRASKAALNQ 204
             G +   + + P +      +ER    + NL    GSI         + Y A+KAA+  
Sbjct: 113 VKGLLNGTRAVLPGM------VERKSGHIINL----GSIAGRYPYPGGAVYGATKAAVRA 162

Length = 246

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 30/186 (16%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G    V GA++GIG   A   +E      VI   +                       L
Sbjct: 7   SGKTVWVTGAAQGIGYAVALAFVEAG--AKVIGFDQAFLTQEDY---------PFATFVL 55

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D++  + +    + +  + G L++L+NA+GIL +        +    +++     + VNA
Sbjct: 56  DVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGAT--DSLSDEDWQQT-----FAVNA 108

Query: 147 VGPILVIKHMSPLLKVGGTG-IERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
            G   + + + P  +   +G I   V V +N +A V  I      G  +Y ASKAAL   
Sbjct: 109 GGAFNLFRAVMPQFRRQRSGAI---VTVGSN-AAHVPRI------GMAAYGASKAALTSL 158

Query: 205 CKILAM 210
            K + +
Sbjct: 159 AKCVGL 164

Length = 252

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 55.2 bits (133), Expect = 2e-09
 Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 24/181 (13%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKNRFPERL 81
           +  G V+++ G + GIG   A+ L  K+    VIA   +  G   A  L D    F    
Sbjct: 1   RLDGKVAIITGGASGIGEATAR-LFAKHGARVVIADIDDDAGQAVAAELGDPDISF---- 55

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
             +  D+TVE+ + A+  +   ++G L+++ N +G+L  P     ET+L + E+      
Sbjct: 56  --VHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERV----- 108

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            +VN  G  L  KH + ++     G    VA VA +   +G          H+Y ASK A
Sbjct: 109 LDVNVYGAFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGP---------HAYTASKHA 159

Query: 202 L 202
           +
Sbjct: 160 V 160

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 53.8 bits (130), Expect = 7e-09
 Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 23/173 (13%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ GA + IGL  A  LL +     VI + R    A  +  L+         +Q D +  
Sbjct: 6   LITGAGQRIGLALAWHLLAQGQP--VIVSYRTHYPA--IDGLRQA---GAQCIQADFSTN 58

Query: 92  STIEASAKSIKEKYGSLNLLI-NASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPI 150
           + I A    +K+    L  +I NAS  L+          L +      M+   VNA  P 
Sbjct: 59  AGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLAR------MMQIHVNA--PY 110

Query: 151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           L+   +  LL+  G     D+  + +     GS  D  +     Y ASKAAL+
Sbjct: 111 LLNLALEDLLRGHGHAA-SDIIHITDYVVEKGS--DKHIA----YAASKAALD 156

Length = 236

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 54.5 bits (132), Expect = 9e-09
 Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 25/188 (13%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V+LV GA+ GIG   AK+L  +    CV+    +   A          P+R   +  D
Sbjct: 422 GKVALVTGAAGGIGKATAKRLAAEG--ACVVLADLDEEAAEAAAAELGG-PDRALGVACD 478

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T E+ ++A+ +     +G ++++++ +GI     +   ET+     +S     ++VNA 
Sbjct: 479 VTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIE--ETSDEDWRRS-----FDVNAT 531

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVAN---LSARVGSIGDNRLGGWHSYRASKAALNQ 204
           G  LV +    ++K  G G    +  +A+   ++                Y A+KAA   
Sbjct: 532 GHFLVAREAVRIMKAQGLG--GSIVFIASKNAVNPGPNFGA---------YGAAKAAELH 580

Query: 205 -CKILAMD 211
             + LA++
Sbjct: 581 LVRQLALE 588

Length = 681

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           KG V+LV GASRGIG   A  L E    G  ++   RN   A     L  +         
Sbjct: 4   KGKVALVTGASRGIGFGIASGLAE---AGANIVINSRNEEKAEEAQQLIEKEGVEATAFT 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
            D++ E  I+A+ ++I+E +G +++L+N +GI+      + PE     V   +L   + V
Sbjct: 61  CDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFV 120

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS-YRASKAAL- 202
           +      V +HM          I++    + N    + S+     G     Y ASK  + 
Sbjct: 121 SQ----AVARHM----------IKQGHGKIIN----ICSLLSELGGPPVPAYAASKGGVA 162

Query: 203 NQCKILAMDF 212
              K LA ++
Sbjct: 163 GLTKALATEW 172

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 21/175 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG V++V G +RG+GL  A+ L+ +  K  V+ +                  +      L
Sbjct: 4   KGKVAIVTGGARGLGLAHARLLVAEGAK--VVLSDILDEEGQAAAA---ELGDAARFFHL 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T E    A   + +E +G L++L+N +GIL+   V   ETT  + E   L+   ++N 
Sbjct: 59  DVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTV---ETTTLE-EWRRLL---DINL 111

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            G  L  + + P +K  G G       + N+S+  G +GD  L     Y ASK A
Sbjct: 112 TGVFLGTRAVIPPMKEAGGG------SIINMSSIEGLVGDPALAA---YNASKGA 157

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 16/129 (12%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ G S G G   A+  L    +  V+ T R+        D +   P+R     LD+T  
Sbjct: 8   LITGVSSGFGRALAQAALAAGHR--VVGTVRSEAARA---DFEALHPDRALARLLDVTDF 62

Query: 92  STIEASAKSIKEKYGSLNLLINASGI--LSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
             I+A     +  +G +++L+N +G            E+ L ++ +      +EVN  G 
Sbjct: 63  DAIDAVVADAEATFGPIDVLVNNAGYGHEGAIE----ESPLAEMRRQ-----FEVNVFGA 113

Query: 150 ILVIKHMSP 158
           + + K + P
Sbjct: 114 VAMTKAVLP 122

Length = 277

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 12/111 (10%)

Query: 21  SASVKW--------KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLL 71
               KW         G V++V GA+ G+G E A  L  K     V+   RN + G     
Sbjct: 1   MKMTKWTAADIPDQSGRVAVVTGANTGLGYETAAALAAKGAH--VVLAVRNLDKGKAAAA 58

Query: 72  DLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIP 121
            +    P   + + +LDLT  +++ A+A +++  Y  ++LLIN +G++  P
Sbjct: 59  RITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTP 109

Length = 306

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 2e-08
 Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 36/177 (20%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
            +L+ GASRGIG   A++L   +    ++   R    A  L +L    P       +DLT
Sbjct: 5   TALITGASRGIGAAIARELAPTHT---LLLGGRP---AERLDELAAELP-GATPFPVDLT 57

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL---MLAYEVNA 146
               I A+ + +      L++L++ +G+            L  V +S++       EVN 
Sbjct: 58  DPEAIAAAVEQLGR----LDVLVHNAGV----------ADLGPVAESTVDEWRATLEVNV 103

Query: 147 VGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           V P  + + + P L+   G        V  N  A     G     GW SY ASK AL
Sbjct: 104 VAPAELTRLLLPALRAAHGH------VVFINSGA-----GLRANPGWGSYAASKFAL 149

Length = 227

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 26/185 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQ 85
           KG V++V G + G+GL   ++LL +  K  VI    N  G T   L    RF      + 
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAK-VVILDLPNSPGETVAKLGDNCRF------VP 53

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL----QPETTLNKVEKSSLMLA 141
           +D+T E  ++A+    K K+G L++++N +GI           Q   +L   ++      
Sbjct: 54  VDVTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQR-----V 108

Query: 142 YEVNAVGPILVIKHMSPLL--KVGGTGIERDVAV-VANLSARVGSIGDNRLGGWHSYRAS 198
             VN +G   VI+  +  +       G ER V +  A+++A  G IG        +Y AS
Sbjct: 109 INVNLIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQA------AYSAS 162

Query: 199 KAALN 203
           K  + 
Sbjct: 163 KGGIV 167

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 17/176 (9%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V+LV GA+RGIG   A +L     +  VI      + A    +L      +    Q+D
Sbjct: 6   GRVALVTGAARGIGRAIAVRLAADGAE--VIVVDICGDDAAATAELVEAAGGKARARQVD 63

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +   + ++A+  +  E +G L++L+  +GI        P T   +++        +VN  
Sbjct: 64  VRDRAALKAAVAAGVEDFGRLDILVANAGIF-------PLTPFAEMDDEQWERVIDVNLT 116

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           G  L+ +   P L   G G       +   S+  G        G   Y ASKA L 
Sbjct: 117 GTFLLTQAALPALIRAGGG------RIVLTSSVAGPRVGYP--GLAHYAASKAGLV 164

Length = 251

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 51.9 bits (125), Expect = 3e-08
 Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 24/188 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
            G V+LV GASRGIG   AK+L      G   V+    +   A  ++        +   +
Sbjct: 2   AGKVALVTGASRGIGRAIAKRLAR---DGASVVVNYASSKAAAEEVVAEIEAAGGKAIAV 58

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           Q D++  S +     + ++ +G +++L+N +G++    + +P    ++ E   +     V
Sbjct: 59  QADVSDPSQVARLFDAAEKAFGGVDILVNNAGVM----LKKPIAETSEEEFDRMF---TV 111

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N  G   V++  +  L+ GG  I        N+S+   S+       + +Y  SKAA+  
Sbjct: 112 NTKGAFFVLQEAAKRLRDGGRII--------NISS---SLTAAYTPNYGAYAGSKAAVEA 160

Query: 205 -CKILAMD 211
             ++LA +
Sbjct: 161 FTRVLAKE 168

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 3e-08
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 26/175 (14%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-- 89
           +V G SRG+G   A+QLL+       +A  R+P        L     ERL  ++LDL+  
Sbjct: 5   IVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP-------SLAAAAGERLAEVELDLSDA 57

Query: 90  --VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
               + +     +      S  LLIN +G       ++P   L  ++ +++  A  +N  
Sbjct: 58  AAAAAWLAGDLLAAFVDGASRVLLINNAG------TVEPIGPLATLDAAAIARAVGLNVA 111

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            P+++    + L +      ER +  +++ +AR      N   GW  Y A+KAAL
Sbjct: 112 APLML---TAALAQAASDAAERRILHISSGAAR------NAYAGWSVYCATKAAL 157

Length = 243

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 51.6 bits (124), Expect = 4e-08
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 20/176 (11%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V++V GA  G G   A++  ++  +  VIA   N +GA  +        E    +Q D
Sbjct: 5   GKVAIVTGAGSGFGEGIARRFAQEGAR-VVIAD-INADGAERVAA---DIGEAAIAIQAD 59

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T  + +EA  ++   K+G L++L+N +GI            + +V++      + VN  
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGITHRN------KPMLEVDEEEFDRVFAVNVK 113

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
              L  + + P ++  G G+  ++A  A L  R G         W  Y ASK  + 
Sbjct: 114 SIYLSAQALVPHMEEQGGGVIINIASTAGLRPRPGLT-------W--YNASKGWVV 160

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 50.9 bits (123), Expect = 7e-08
 Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 26/180 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +G  +LV GASRGIG   A +L      G  V+    N   A  L            VL 
Sbjct: 4   QGKTALVTGASRGIGRAIALRLAA---DGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL---MLAY 142
            D++ E+ + A  ++  E +G+L++L+N +GI          T    + + S        
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGI----------TRDALLPRMSEEDWDRVI 110

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           +VN  G   V++   P +     G      +V N+S+  G  G N   G  +Y A+KA +
Sbjct: 111 DVNLTGTFNVVRAALPPMIKARYG-----RIV-NISSVSGVTG-NP--GQTNYSAAKAGV 161

Length = 246

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.6 bits (122), Expect = 9e-08
 Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 18/176 (10%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V++V GAS GIG   A++   +  +  V+ T RN   A  +         R   +  D
Sbjct: 5   GKVAIVTGASSGIGEGIARRFAAEGAR--VVVTDRNEEAAERVAAEI-LAGGRAIAVAAD 61

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           ++ E+ +EA+  +  E++GS+++L+N +G       L  +    + ++      + VN  
Sbjct: 62  VSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPL-LDVDEAEFDR-----IFAVNVK 115

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
            P L  +   P ++  G G   +VA  A L  R G        GW  Y ASK A+ 
Sbjct: 116 SPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG-------LGW--YNASKGAVI 162

Length = 251

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
            + GAS G G    ++LL + D+  V AT R P+    L DLK R+ +RL VLQLD+T  
Sbjct: 6   FITGASSGFGRGMTERLLARGDR--VAATVRRPDA---LDDLKARYGDRLWVLQLDVTDS 60

Query: 92  STIEASAKSIKEKYGSLNLLINASG 116
           + + A         G ++++++ +G
Sbjct: 61  AAVRAVVDRAFAALGRIDVVVSNAG 85

Length = 276

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 26/185 (14%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V ++ GASRGIG   A    E+    C +   RN + A  ++    R       +  D+ 
Sbjct: 4   VMIITGASRGIGAATALLAAERGYAVC-LNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            E+ +    +++  + G L+ L+N +GI      L+ +  L +++ + L   +  N VG 
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAGI------LEAQMRLEQMDAARLTRIFATNVVGS 116

Query: 150 IL----VIKHMSPLLKVGGTGIERDVAVVANLS---ARVGSIGDNRLGGWHSYRASKAAL 202
            L     +K MS   + GG G       + N+S   AR+GS G+     +  Y ASK A+
Sbjct: 117 FLCAREAVKRMST--RHGGRG-----GAIVNVSSMAARLGSPGE-----YIDYAASKGAI 164

Query: 203 NQCKI 207
           +   I
Sbjct: 165 DTMTI 169

Length = 248

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 22/178 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
           KG V+L+ G S+GIG   A+ LL +  K  V  T R+          L N+    +  L 
Sbjct: 5   KGKVALITGGSKGIGFAIAEALLAEGYK--VAITARDQKELEEAAAELNNK--GNVLGLA 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D+  E+ ++ +  +I   +G L++LI  +G+        P   L   E+  L++  + N
Sbjct: 61  ADVRDEADVQRAVDAIVAAFGGLDVLIANAGV----GHFAPVEELT-PEEWRLVI--DTN 113

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
             G    IK   P LK GG  I        N+S+  G+   N   G  +Y ASK  L 
Sbjct: 114 LTGAFYTIKAAVPALKRGGGYI-------INISSLAGT---NFFAGGAAYNASKFGLV 161

Length = 237

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 49.0 bits (117), Expect = 3e-07
 Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 22/179 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +G V++V GA  GIG   A +L     +G  V+    +   A  ++    +       L+
Sbjct: 2   EGKVAIVTGAGAGIGAACAARL---AREGARVVVADIDGGAAQAVVA---QIAGGALALR 55

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           +D+T E  + A  +   E++G L+LL+N +G + +   +  +T L   +++       +N
Sbjct: 56  VDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAII-DTDLAVWDQT-----MAIN 109

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
             G  L  +H +P +   G G       + NLS+  G  GD    G+ +Y ASKAA+  
Sbjct: 110 LRGTFLCCRHAAPRMIARGGG------SIVNLSSIAGQSGD---PGYGAYGASKAAIRN 159

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 49.0 bits (117), Expect = 3e-07
 Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 26/184 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G + LV G SRGIG   A+  LE   +  VI + R    A    D         + + +
Sbjct: 5   AGKIVLVTGGSRGIGRMIAQGFLEAGAR--VIISARK---AEACADAAEELSAYGECIAI 59

Query: 87  --DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYE 143
             DL+ E  IEA    + E+   L++L+N +G      +   PE+  +KV         +
Sbjct: 60  PADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKV--------MD 111

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW---HSYRASKA 200
           +N      + + + PLL+   T    + A V N    +GSI    +      +SY ASKA
Sbjct: 112 INVKSVFFLTQALLPLLRAAATA--ENPARVIN----IGSI-AGIVVSGLENYSYGASKA 164

Query: 201 ALNQ 204
           A++Q
Sbjct: 165 AVHQ 168

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 4e-07
 Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 17/182 (9%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPE-RLDVLQ 85
           G  ++V GAS G+GL  A++L     +  VI   RN   G   +  ++   P+ +L +  
Sbjct: 14  GKRAVVTGASDGLGLGLARRLAAAGAE--VILPVRNRAKGEAAVAAIRTAVPDAKLSLRA 71

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LDL+  +++ A  + ++ +   ++LLIN +G+++ P   + +TT +  E     L +  N
Sbjct: 72  LDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPP---ERQTTADGFE-----LQFGTN 123

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQC 205
            +G   +  H+ PLL+ G       V   ++++AR G+I  + L    SY   + A +Q 
Sbjct: 124 HLGHFALTAHLLPLLRAGRA----RVTSQSSIAARRGAINWDDLNWERSYAGMR-AYSQS 178

Query: 206 KI 207
           KI
Sbjct: 179 KI 180

Length = 313

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 48.7 bits (116), Expect = 4e-07
 Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 41/198 (20%)

Query: 17  TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVI--------ATCRNPNGAT 68
           ++S+  S +  G V+LV G + GIG    +   +   K C++          C +  G  
Sbjct: 7   SASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEP 66

Query: 69  GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPET 128
            +                D+TVE  +  +     +K+G+L++++N +G+        P  
Sbjct: 67  NVC-----------FFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTG-----PPCP 110

Query: 129 TLNKVEKSSLMLAYEVNAVGPILVIKH----MSPLLKVGGTGIERDVAVVANLSARVGSI 184
            +  VE S     ++VN  G  L +KH    M PL K  G+ +      + ++++ +G +
Sbjct: 111 DIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKK--GSIVS-----LCSVASAIGGL 163

Query: 185 GDNRLGGWHSYRASKAAL 202
           G       H+Y  SK A+
Sbjct: 164 GP------HAYTGSKHAV 175

Length = 280

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 48.6 bits (116), Expect = 5e-07
 Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 29/184 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPER---LD 82
           +G  +LV G ++GIG    ++L      G  + TC RN       L     + E+   ++
Sbjct: 5   EGKTALVTGGTKGIGYAIVEELAG---LGAEVYTCARNQKELDECLT---EWREKGFKVE 58

Query: 83  VLQLDLTVESTIEASAKSIKEKYGS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
               D++  S  +    ++   +G  LN+L+N +G       ++ E      E  SL+++
Sbjct: 59  GSVCDVSSRSERQELMDTVASHFGGKLNILVNNAGT-----NIRKEAKDYTEEDYSLIMS 113

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA-RVGSIGDNRLGGWHSYRASKA 200
               A   +  + H  PLLK  G G    ++ VA + A   G+           Y A+K 
Sbjct: 114 TNFEAAYHLSRLAH--PLLKASGNGNIVFISSVAGVIAVPSGAP----------YGATKG 161

Query: 201 ALNQ 204
           ALNQ
Sbjct: 162 ALNQ 165

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 48.3 bits (115), Expect = 6e-07
 Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 25/177 (14%)

Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQL 86
             +LV GASRGIG   A+ L  +  +  V    R+           L+       DV   
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYR--VGICARDEARLAAAAAQELEGVLGLAGDVRD- 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
               E+ +  +  +++E +G L+ L+N +G+     V++P   L   E   ++       
Sbjct: 58  ----EADVRRAVDAMEEAFGGLDALVNNAGV----GVMKPVEELTPEEWRLVLD--TNLT 107

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
                + K    LL+ GG         + N+ +  G    N   G  +Y ASK  L 
Sbjct: 108 GAFYCIHKAAPALLRRGG-------GTIVNVGSLAGK---NAFKGGAAYNASKFGLL 154

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 48.0 bits (115), Expect = 6e-07
 Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 22/176 (12%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQLDLTV 90
           L+ GAS GIG   A++  +   K  +I T R       L D L  +FP ++  LQLD++ 
Sbjct: 4   LITGASSGIGEATARRFAKAGAK--LILTGRRAERLQELADELGAKFPVKVLPLQLDVSD 61

Query: 91  ESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
             +IEA+ +++ E++  +++L+N +G+ L +      E  L   E    M+  + N  G 
Sbjct: 62  RESIEAALENLPEEFRDIDILVNNAGLALGLDPA--QEADLEDWET---MI--DTNVKGL 114

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALNQ 204
           + V + + P++      I R+   + NL    GSI G     G + Y A+KAA+ Q
Sbjct: 115 LNVTRLILPIM------IARNQGHIINL----GSIAGRYPYAGGNVYCATKAAVRQ 160

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.2 bits (115), Expect = 7e-07
 Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 16/146 (10%)

Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TGLLDLKNRFPERL 81
           S+++KG V+L+ G +RGIG   A+  L +  K  V       N A     +L+ +     
Sbjct: 2   SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAV-----LYNSAENEAKELREKGVF-- 54

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
             ++ D+     ++ S + +++++G +++L+N +GI+     L P    ++ EK + M+ 
Sbjct: 55  -TIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIM----YLMPFEEFDE-EKYNKMI- 107

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGI 167
            ++N  G I       PLLK+   G 
Sbjct: 108 -KINLNGAIYTTYEFLPLLKLSKNGA 132

Length = 255

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 7e-07
 Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 40/194 (20%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V++V G + GIG   A+    K  +  V    R+ + A     L          L  D
Sbjct: 15  GKVAVVTGGASGIGHAIAELFAAKGAR--VALLDRSEDVAEVAAQLL---GGNAKGLVCD 69

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP---------ETTLNKVEKSSL 138
           ++   ++EA+  ++   +G +++L+N++G+     +L P         + T++   K S 
Sbjct: 70  VSDSQSVEAAVAAVISAFGRIDILVNSAGVA----LLAPAEDVSEEDWDKTIDINLKGSF 125

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
           ++A    AVG     +HM   +  GG  I        NL+++ G +    L    +Y AS
Sbjct: 126 LMA---QAVG-----RHM---IAAGGGKI-------VNLASQAGVVA---LERHVAYCAS 164

Query: 199 KAAL-NQCKILAMD 211
           KA +    K+LA++
Sbjct: 165 KAGVVGMTKVLALE 178

Length = 255

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 47.9 bits (114), Expect = 7e-07
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 24/181 (13%)

Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT--CRNPNGATGLLDLKNRFPERLDVLQL 86
            ++LV G SRGIG   A  L ++   G  +A    +N + A  +++L  +   +  VLQ 
Sbjct: 2   AIALVTGGSRGIGRATALLLAQE---GYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQA 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D++ E+ + A   +I +    L  L+N +GIL        + T+  +    +      N 
Sbjct: 59  DISDENQVVAMFTAIDQHDEPLAALVNNAGILF------TQCTVENLTAERINRVLSTNV 112

Query: 147 VGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            G  L     +K M+  LK GG+G    +  V++ ++R+G+ G+     +  Y ASK A+
Sbjct: 113 TGYFLCCREAVKRMA--LKHGGSG--GAIVNVSSAASRLGAPGE-----YVDYAASKGAI 163

Query: 203 N 203
           +
Sbjct: 164 D 164

Length = 247

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 8e-07
 Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 9/140 (6%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG V+LV GA+ GIGLE A  L ++  K  VIA   +   A     L+    + + V  +
Sbjct: 3   KGKVALVTGAASGIGLEIALALAKEGAK-VVIADLNDEAAAAAAEALQKAGGKAIGV-AM 60

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T E  I A      E +G +++L+N +GI  +  +    T     EK   M+A  +  
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPT-----EKWKKMIA--IML 113

Query: 147 VGPILVIKHMSPLLKVGGTG 166
            G  L  K   P++K  G G
Sbjct: 114 DGAFLTTKAALPIMKAQGGG 133

Length = 258

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 47.8 bits (114), Expect = 8e-07
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDL 88
           ++LV GA RGIG   A++LL    +  VIAT  + N        +  F E ++ + +LD+
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYR--VIATYFSGNDCAKDWFEEYGFTEDQVRLKELDV 61

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGI 117
           T       +   I+E+ G +++L+N +GI
Sbjct: 62  TDTEECAEALAEIEEEEGPVDILVNNAGI 90

Length = 245

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 24/185 (12%)

Query: 25  KWK--GGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPER 80
           +W+  G  +L+ GAS+GIGL  A++ L     G  V+   R+ +      D L   FPER
Sbjct: 4   RWRLDGQTALITGASKGIGLAIAREFL---GLGADVLIVARDADALAQARDELAEEFPER 60

Query: 81  -LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
            +  L  D++ +    A    +++ +  L++L+N +G     N+ +      + E   + 
Sbjct: 61  EVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGG----NIRKAAIDYTEDEWRGI- 115

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
             +E N      + ++  PLLK   +    ++  V+ L+         R G    Y  +K
Sbjct: 116 --FETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT-------HVRSGA--PYGMTK 164

Query: 200 AALNQ 204
           AAL Q
Sbjct: 165 AALLQ 169

Length = 257

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 33/175 (18%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
           LV GA++GIGL  + +L    + G  VI   R+             FP  L     DL  
Sbjct: 7   LVTGATKGIGLALSLRL---ANLGHQVIGIARSAIDD---------FPGEL--FACDLAD 52

Query: 91  ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPI 150
                A+   I E +  ++ ++N  GI ++P   QP   L K++ ++L   Y++N    +
Sbjct: 53  IEQTAATLAQINEIHP-VDAIVNNVGI-ALP---QP---LGKIDLAALQDVYDLNVRAAV 104

Query: 151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQC 205
            V +     +K+   G       + N+ +R      +R     SY A+K+AL  C
Sbjct: 105 QVTQAFLEGMKLREQG------RIVNICSRAIFGALDRT----SYSAAKSALVGC 149

Length = 234

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 43/194 (22%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GL-LDLKNRFPERL 81
           ++     L+ GA+ GIGL  A+  L                GA   G+    K       
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLA--------------QGAQVYGVDKQDKPDLSGNF 47

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP--ETTLNKVEKSSLM 139
             LQLDL+ +       + + +   S+++L N +GIL   +  +P  +T+L + +     
Sbjct: 48  HFLQLDLSDD------LEPLFDWVPSVDILCNTAGIL---DDYKPLLDTSLEEWQH---- 94

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
             ++ N     L+ +   P +    +GI  ++  +A+  A  G       GG  +Y ASK
Sbjct: 95  -IFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVA--G-------GGGAAYTASK 144

Query: 200 AAL-NQCKILAMDF 212
            AL    K LA+D+
Sbjct: 145 HALAGFTKQLALDY 158

Length = 235

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 32/187 (17%)

Query: 21  SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPER 80
           + +  + G   LV GAS GIG   A  L ++  +  V+A  RN   A  L  L       
Sbjct: 2   NMAFDFSGKSVLVTGASSGIGRACAVALAQRGAR--VVAAARN---AAALDRLAGETGCE 56

Query: 81  LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP--ETTLNKVEKSSL 138
              L+LD+  ++ I A+  +     G+ + L+N +GI      L+   + T    ++   
Sbjct: 57  --PLRLDVGDDAAIRAALAA----AGAFDGLVNCAGI----ASLESALDMTAEGFDR--- 103

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG-DNRLGGWHSYRA 197
                VNA G  LV +H++  +   G G       + N+S++   +G  + L    +Y A
Sbjct: 104 --VMAVNARGAALVARHVARAMIAAGRG-----GSIVNVSSQAALVGLPDHL----AYCA 152

Query: 198 SKAALNQ 204
           SKAAL+ 
Sbjct: 153 SKAALDA 159

Length = 245

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 25/144 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V+LV GAS GIG   A++L      G  V  T RNP  A  +          +++L+
Sbjct: 3   NSKVALVTGASSGIGRATAEKLAR---AGYRVFGTSRNPARAAPI--------PGVELLE 51

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA---Y 142
           LD+T +++++A+   +  + G +++L+N +G+                E+SS+  A   +
Sbjct: 52  LDVTDDASVQAAVDEVIARAGRIDVLVNNAGV----------GLAGAAEESSIAQAQALF 101

Query: 143 EVNAVGPILVIKHMSPLLKVGGTG 166
           + N  G + + + + P ++  G+G
Sbjct: 102 DTNVFGILRMTRAVLPHMRAQGSG 125

Length = 270

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 43/188 (22%), Positives = 71/188 (37%), Gaps = 26/188 (13%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNG-ATGLLDLKNRFPERLDVLQLD 87
           V+LV GA++ IG   A+ L  +   G  V+         A  L D  N       ++Q D
Sbjct: 2   VALVTGAAKRIGRAIAEALAAE---GYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQAD 58

Query: 88  LTVESTIEASAKSIKEKYGSLNLLI-NASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           L+  +       +    +G  ++L+ NAS          P       E  +    + +N 
Sbjct: 59  LSDFAACADLVAAAFRAFGRCDVLVNNAS-------AFYPTPLGQGSE-DAWAELFGINL 110

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLS-ARVGSIGDNRLGGWHSYRASKAAL-NQ 204
             P L+I+  +  L     G       + N+  A      D  L G+ +Y  SKAAL   
Sbjct: 111 KAPYLLIQAFARRLAGSRNG------SIINIIDAMT----DRPLTGYFAYCMSKAALEGL 160

Query: 205 CKILAMDF 212
            +  A++ 
Sbjct: 161 TRSAALEL 168

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 33/182 (18%)

Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQ 85
           G  L+ G + G+GL  A+ L  +      +        A G  +L          + V  
Sbjct: 1   GTVLITGGTGGLGLALARWLAAE--GARHLVLVSRRGPAPGAAELVAELEALGAEVTVAA 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL-QPETTLNKVEKSSLMLAYEV 144
            D+     + A   ++    G L+ +++ +G+L    +         +V           
Sbjct: 59  CDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERV--------LAP 110

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS---ARVGSIGDNRLGGWHSYRASKAA 201
              G   + +               D+      S     +GS       G  +Y A+ AA
Sbjct: 111 KVTGAWNLHELTRD----------LDLGAFVLFSSVAGVLGS------PGQANYAAANAA 154

Query: 202 LN 203
           L+
Sbjct: 155 LD 156

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 42/177 (23%), Positives = 63/177 (35%), Gaps = 22/177 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL-- 84
            G   LV G + GIG   A+   E   +  V             L           V   
Sbjct: 10  DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSE------AALAATAARLPGAKVTAT 63

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             D+   + +E    +  E++G L++L+N +GI        P   ++++          V
Sbjct: 64  VADVADPAQVERVFDTAVERFGGLDVLVNNAGIAG------PTGGIDEITPEQWEQTLAV 117

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
           N  G     +   PLLK  G G      V+  LS+  G +G     G   Y ASK A
Sbjct: 118 NLNGQFYFARAAVPLLKASGHG-----GVIIALSSVAGRLG---YPGRTPYAASKWA 166

Length = 264

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 46.3 bits (110), Expect = 3e-06
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 11/139 (7%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVLQLD 87
           V L+ G S GIGL  A +L     K   V AT R+      L +         L+ LQLD
Sbjct: 2   VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQLD 61

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +    ++ A+ + + E    +++L+  +G+     +L P   L++   +S+    +VN  
Sbjct: 62  VCDSKSVAAAVERVTE--RHVDVLVCNAGV----GLLGPLEALSEDAMASVF---DVNVF 112

Query: 148 GPILVIKHMSPLLKVGGTG 166
           G + +++   P +K  G+G
Sbjct: 113 GTVRMLQAFLPDMKRRGSG 131

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 25/171 (14%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           +V GA++GIG   A+ LL+      VIA             L   + + L +  LD+   
Sbjct: 2   IVTGAAQGIGRAVARHLLQAGAT--VIALDLPFV-------LLLEYGDPLRLTPLDVADA 52

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
           + +      +  ++G ++ L+N +G+L            + +        + VN  G   
Sbjct: 53  AAVREVCSRLLAEHGPIDALVNCAGVLRPGA-------TDPLSTEDWEQTFAVNVTGVFN 105

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           +++ ++P +K   TG    +  VA+ +A V  I         +Y ASKAAL
Sbjct: 106 LLQAVAPHMKDRRTG---AIVTVASNAAHVPRI------SMAAYGASKAAL 147

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 40/186 (21%), Positives = 79/186 (42%), Gaps = 24/186 (12%)

Query: 31  SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
           +LV G SRGIG   A +L E      VI   ++ + A  +         +  V++ D++ 
Sbjct: 1   ALVTGGSRGIGKAIALRLAE-RGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQ 59

Query: 91  ESTIEASAKSIKEKYGSLNLLIN--ASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
              +E    ++KE++G L++L++  A+G             L+++  +        N   
Sbjct: 60  PQDVEEMFAAVKERFGRLDVLVSNAAAGAFR---------PLSELTPAHWDAKMNTNLKA 110

Query: 149 PILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLG-GWHSYRASKAALNQ-CK 206
            +   +  + L++  G G      +VA     + S+G  R    + +   +KAAL    +
Sbjct: 111 LVHCAQQAAKLMRERGGG-----RIVA-----ISSLGSIRALPNYLAVGTAKAALEALVR 160

Query: 207 ILAMDF 212
            LA++ 
Sbjct: 161 YLAVEL 166

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 38/187 (20%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-GLLDLKNRFPE--RLDV 83
           +G + +V G S GIGL   K+LL               NGA     D+     +      
Sbjct: 8   QGKIIIVTGGSSGIGLAIVKELLA--------------NGANVVNADIHGGDGQHENYQF 53

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA-- 141
           +  D++    +  +   I EK+G ++ L+N +GI +IP +L  E    K       L   
Sbjct: 54  VPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGI-NIPRLLVDE----KDPAGKYELNEA 108

Query: 142 -----YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
                + +N  G  L+ + ++  +      +++   V+ N+S+  G  G     G   Y 
Sbjct: 109 AFDKMFNINQKGVFLMSQAVARQM------VKQHDGVIVNMSSEAGLEGSE---GQSCYA 159

Query: 197 ASKAALN 203
           A+KAALN
Sbjct: 160 ATKAALN 166

Length = 266

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 46.0 bits (109), Expect = 4e-06
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 4/106 (3%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDV 83
           +W+G V+LV GAS GIG   A+ L++   K  V+   R  +    L    ++     L  
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMK--VVGCARRVDKIEALAAECQSAGYPTLFP 60

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
            Q DL+ E  I +   +I+ ++  +++ IN +G+   P  L    T
Sbjct: 61  YQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLAR-PEPLLSGKT 105

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 45.2 bits (107), Expect = 7e-06
 Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 26/185 (14%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G  +LV GA +GIG    K L +   +  V+A  R       L+    R    ++ + +D
Sbjct: 7   GKRALVTGAGKGIGRATVKALAKAGAR--VVAVSRTQADLDSLV----RECPGIEPVCVD 60

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           L+     E +  S+    G ++LL+N + +     +LQP     +V K +   +++VN  
Sbjct: 61  LSDWDATEEALGSV----GPVDLLVNNAAVA----ILQP---FLEVTKEAFDRSFDVNVR 109

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-CK 206
             I V + ++  +   G         + N+S++        L     Y ++KAAL+   K
Sbjct: 110 AVIHVSQIVARGMIARGVP-----GSIVNVSSQASQRA---LTNHTVYCSTKAALDMLTK 161

Query: 207 ILAMD 211
           ++A++
Sbjct: 162 VMALE 166

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 45.0 bits (107), Expect = 9e-06
 Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 36/193 (18%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V++V G +  IG   A+ L+       V     + +    +        ER   +  
Sbjct: 5   AGKVAIVTGGATLIGAAVARALVAAG--ARVAIVDIDADNGAAVAA---SLGERARFIAT 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINAS------GILSIPNVLQPETTLNKVEKSSLML 140
           D+T ++ IE +  ++  ++G +++L+N +      G+ S               ++  + 
Sbjct: 60  DITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLAS--------------SRADWLA 105

Query: 141 AYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
           A +VN V   ++ +   P L  GG         + N ++        + G W  Y ASKA
Sbjct: 106 ALDVNLVSAAMLAQAAHPHLARGG-------GAIVNFTSISAKFA--QTGRW-LYPASKA 155

Query: 201 ALNQ-CKILAMDF 212
           A+ Q  + +AMD 
Sbjct: 156 AIRQLTRSMAMDL 168

Length = 261

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 8/132 (6%)

Query: 35  GASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQLDLTVEST 93
                I    AK   E+  +  V+ T   P    G +D L    P   DV+ LD+T +  
Sbjct: 3   ADDNSIAWAIAKAAAEEGAE--VVLTTWPPALRMGAVDELAKELPA--DVIPLDVTSDED 58

Query: 94  IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVI 153
           I+   + +KE  G ++ L+++  +       +P    +   +   + A +++A   I + 
Sbjct: 59  IDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTS---REGFLKALDISAYSFISLA 115

Query: 154 KHMSPLLKVGGT 165
           K   PL+  GG+
Sbjct: 116 KAAKPLMNEGGS 127

Length = 239

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G  +LV G+SRGIG + AK L        V+   +    A  ++        R   +  D
Sbjct: 6   GKTALVTGSSRGIGADTAKILAGA-GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGAD 64

Query: 88  LTVESTIEASAKSIKEKYGSLNLLI-NASG 116
           LT E ++ A   + +E++G L+ L+ NASG
Sbjct: 65  LTDEESVAALMDTAREEFGGLDALVLNASG 94

Length = 248

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 19/150 (12%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA----TCRNPNGATGLLDLKNRFPERLDV 83
           G V+ V GASRGIG   A   L K     V+A    +  +   A  L        E ++ 
Sbjct: 3   GKVAFVTGASRGIGRAIA-LRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEA 61

Query: 84  -------LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
                  + +D+  E  + A  ++  +++G L++L+N +G + +  V             
Sbjct: 62  AGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPA-------K 114

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTG 166
              L   VN  G  L+ +   P +   G G
Sbjct: 115 RFDLMQRVNLRGTYLLSQAALPHMVKAGQG 144

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 31  SLVQGASRGIGLEFAKQLLEKNDKGCVIATC--RNPNGATGLLDLKNRFPERLDVLQLDL 88
           +LV GASRGIG   A +L     +G  +      +  GA  +++    +  +   +  D+
Sbjct: 1   ALVTGASRGIGRAIALKL---AKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDV 57

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGI 117
           +    ++A  + I+E+ G +++L+N +GI
Sbjct: 58  SDREDVKAVVEEIEEELGPIDILVNNAGI 86

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQ 85
           +  + L+ GA+  IG  F K LL       +I    N      L  +L N +  R+  L+
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAG--ARLILADINAPALEQLKEELTNLYKNRVIALE 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           LD+T + +I+   +S  EK+G +++LIN +  
Sbjct: 59  LDITSKESIKELIESYLEKFGRIDILINNAYP 90

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 44.1 bits (104), Expect = 3e-05
 Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 20/185 (10%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLKNRF-PERLDVLQLD 87
           V+ V G + GIG E A++L    +   V+    N   A  +  ++  +F   R   L++D
Sbjct: 416 VAFVTGGAGGIGRETARRLA--AEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMD 473

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T E  ++A+   +   YG +++++N +GI +       ETTL         L  ++ A 
Sbjct: 474 VTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFE--ETTL-----QEWQLNLDILAT 526

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN-QCK 206
           G  LV +     ++  G G   ++  +A+ +A       +      +Y A+KAA     +
Sbjct: 527 GYFLVAREAFRQMREQGLG--GNIVFIASKNAVYAGKNAS------AYSAAKAAEAHLAR 578

Query: 207 ILAMD 211
            LA +
Sbjct: 579 CLAAE 583

Length = 676

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLD-LKNRFPE-RLDV 83
           +G V++V G S GIGL   + LLE    G  +A C R+          L+ +FP  RL  
Sbjct: 7   EGRVAVVTGGSSGIGLATVELLLE---AGASVAICGRDEERLASAEARLREKFPGARLLA 63

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
            + D+  E+ + A A +++ ++G +++L+N +G
Sbjct: 64  ARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 16/134 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+L+ GA+ GIG   A++ L +  +  VIA    P  A                + L
Sbjct: 5   QGKVALLTGAASGIGEAVAERYLAEGAR-VVIAD-IKPARARL---AALEIGPAAIAVSL 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T + +I+    +  E++G +++L N + +      + P   +  + + S    + VN 
Sbjct: 60  DVTRQDSIDRIVAAAVERFGGIDILFNNAALFD----MAP---ILDISRDSYDRLFAVNV 112

Query: 147 VGPIL----VIKHM 156
            G       V +HM
Sbjct: 113 KGLFFLMQAVARHM 126

Length = 257

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 21/180 (11%)

Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQL 86
            V++V GASRGIG   A +L     +G  IA    P+   AT ++        R    Q 
Sbjct: 2   PVAIVTGASRGIGRAIATELAA---RGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQA 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+   S  EA      E +G L+ L+N +GI       +P   L  + + S      +N 
Sbjct: 59  DIGELSDHEALLDQAWEDFGRLDCLVNNAGIAV-----RPRGDLLDLTEDSFDRLIAINL 113

Query: 147 VGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            GP      V + M         G  R +  V +++A + S   NR      Y  SKA L
Sbjct: 114 RGPFFLTQAVARRMVEQPDR-FDGPHRSIIFVTSINAYLVSP--NR----GEYCISKAGL 166

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 7/108 (6%)

Query: 17  TSSASASVKWK-GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN 75
            + A+AS   K GGV LV G + GIG   A+ L  +     ++   R+P         + 
Sbjct: 193 PAGAAASAPLKPGGVYLVTGGAGGIGRALARALARRYGAR-LVLLGRSPLPPEEEWKAQT 251

Query: 76  -----RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGIL 118
                    R+  +  D+T  + +    + ++E+YG+++ +I+A+G+L
Sbjct: 252 LAALEALGARVLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVL 299

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 22  ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPER 80
           A     G  ++V G   G+GLE  + L +      VI   R P+     L  +     + 
Sbjct: 20  AGHDLSGKTAIVTGGYSGLGLETTRALAQAGAH--VIVPARRPDVAREALAGI-----DG 72

Query: 81  LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIP 121
           ++V+ LDL    ++ A A+   +    +++LIN +G+++ P
Sbjct: 73  VEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACP 113

Length = 315

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.5 bits (101), Expect = 5e-05
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 9/94 (9%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFP---ERLDVLQ 85
           V+LV GA+RG+G   A +L      G  V+   R+        +L         R   +Q
Sbjct: 8   VALVTGAARGLGRAIALRLARA---GADVVVHYRS--DEEAAEELVEAVEALGRRAQAVQ 62

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILS 119
            D+T ++ +EA+  +  E++G +++L+N +GI  
Sbjct: 63  ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFE 96

Length = 249

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 28/181 (15%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
           +G  +L+ GA RGIG    +  AK+ +       V    R       + +    +  ++ 
Sbjct: 6   QGKNALITGAGRGIGRAVAIALAKEGVN------VGLLARTEENLKAVAEEVEAYGVKVV 59

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPET-TLNKVEKSSLMLA 141
           +   D++    + A+ + +K + GS+++LIN +GI      L+ +     K+ + +LM  
Sbjct: 60  IATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGV 119

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
           Y         V+  M          IER    + N+S+  G  G        +Y ASK  
Sbjct: 120 YYATRA----VLPSM----------IERQSGDIINISSTAGQKGA---AVTSAYSASKFG 162

Query: 202 L 202
           +
Sbjct: 163 V 163

Length = 239

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 42.4 bits (100), Expect = 6e-05
 Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG V+LV GAS GIG   A +L        V+      + A  +++       +   +Q 
Sbjct: 2   KGKVALVTGASSGIGKAIAIRLATAGAN-VVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           D++ E  + A  +S  +++G+L++L+N +G+
Sbjct: 61  DVSKEEDVVALFQSAIKEFGTLDILVNNAGL 91

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 41.8 bits (98), Expect = 8e-05
 Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 18/176 (10%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V+LV GAS GIG   A+ L  +     + A  R  +    L D       +  VL+LD
Sbjct: 3   GKVALVTGASSGIGEATARALAAEGAAVAIAA--RRVDRLEALADELEAEGGKALVLELD 60

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T E  ++A+ +   E  G L++L+N +GI+    +L P    +  + + ++   + N +
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIM----LLGPVEDADTTDWTRMI---DTNLL 113

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           G +       P   +      R+   + N+S+  G +          Y A+K  +N
Sbjct: 114 GLMYTTHAALPHHLL------RNKGTIVNISSVAGRVAVRNSAV---YNATKFGVN 160

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 41.9 bits (99), Expect = 8e-05
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVL 84
           KG   L+ GA   IG    K +LE    G VIA   +      LL+   K    ++L ++
Sbjct: 3   KGKTILITGAGGLIGSALVKAILEAG--GIVIAADIDKEALNELLESLGKEFKSKKLSLV 60

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLIN 113
           +LD+T + ++E       EKYG ++  +N
Sbjct: 61  ELDITDQESLEEFLSKSAEKYGKIDGAVN 89

Length = 256

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 22/149 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K  V++V G S+GIG     +L E+     VI             D+K      +D  ++
Sbjct: 5   KDKVAIVTGGSQGIGKAVVNRLKEEGSN--VIN-----------FDIKEPSYNDVDYFKV 51

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV-LQPETTLNKVEKSSLMLAYEVN 145
           D++ +  +      +  KYG +++L+N +GI S   +    E   +++          VN
Sbjct: 52  DVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRI--------INVN 103

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVV 174
             G  L+ K+  P +     G+  ++A V
Sbjct: 104 VNGIFLMSKYTIPYMLKQDKGVIINIASV 132

Length = 258

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 34/185 (18%), Positives = 86/185 (46%), Gaps = 19/185 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQ 85
            G  +L+ G++RGIG  FA+  + +  +   IA        AT               + 
Sbjct: 2   DGKTALITGSARGIGRAFAQAYVREGAR-VAIADINLEAARATAAEIGPAAC-----AIS 55

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LD+T +++I+    ++ +++GS+++L+N + +  +  ++        + + S    + +N
Sbjct: 56  LDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVD-------ITRESYDRLFAIN 108

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQC 205
             G + +++ ++  +   G G       + N++++ G  G+  +G + + +A+  +L Q 
Sbjct: 109 VSGTLFMMQAVARAMIAQGRG-----GKIINMASQAGRRGEALVGVYCATKAAVISLTQS 163

Query: 206 KILAM 210
             L +
Sbjct: 164 AGLNL 168

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 27/180 (15%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           G V+LV G+SRGIG   A +L E   +G    +   R+   A    +       +   ++
Sbjct: 4   GKVALVTGSSRGIGKAIALRLAE---EGYDIAVNYARSRKAAEETAEEIEALGRKALAVK 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLIN--ASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
            ++     I+     I E++G L++ +N  ASG      VL+P     ++E+S       
Sbjct: 61  ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASG------VLRP---AMELEESHWDWTMN 111

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR-LGGWHSYRASKAAL 202
           +NA   +   +  + L++  G G      +++     + S+G  R L  + +   SKAAL
Sbjct: 112 INAKALLFCAQEAAKLMEKVGGG-----KIIS-----LSSLGSIRYLENYTTVGVSKAAL 161

Length = 250

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 15/141 (10%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLD 87
           V+++ GA++GIG   A++L      G  I          A   +   +        +  D
Sbjct: 4   VAIITGAAQGIGRAIAERLAAD---GFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGAD 60

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVNA 146
           +T +  +EA      EK+GS ++++N +GI  I  +L   E  L KV        Y VN 
Sbjct: 61  VTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKV--------YAVNV 112

Query: 147 VGPILVIKHMS-PLLKVGGTG 166
            G +  I+  +    K+G  G
Sbjct: 113 FGVLFGIQAAARQFKKLGHGG 133

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 18/162 (11%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD--LKNRFPERLDVL 84
           G V ++ GA+ GIG E A+        G  VI  CRN + A+  +   L+     R++ +
Sbjct: 1   GKVIIITGANSGIGFETARSFAL---HGAHVILACRNMSRASAAVSRILEEWHKARVEAM 57

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            LDL    +++  A++ K K   L++L+  + + ++P  L          +  L   ++V
Sbjct: 58  TLDLASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLT---------EDGLETTFQV 108

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186
           N +G   +++ +  +L+         V VV++ S R   + D
Sbjct: 109 NHLGHFYLVQLLEDVLRRSAPA---RVIVVSSESHRFTDLPD 147

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 37/176 (21%), Positives = 63/176 (35%), Gaps = 20/176 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V  + G   G+G   A  L  +  +  +I     P   T    L     + L +  +
Sbjct: 6   QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQT----LPGVPADALRIGGI 61

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           DL        +   +  ++G L+ L+N +G            T+   +  +    Y VN 
Sbjct: 62  DLVDPQAARRAVDEVNRQFGRLDALVNIAGAF-------VWGTIADGDADTWDRMYGVNV 114

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
              +   K   P L   G G  R V + A  + + G        G  +Y A+KA +
Sbjct: 115 KTTLNASKAALPALTASGGG--RIVNIGAGAALKAGP-------GMGAYAAAKAGV 161

Length = 239

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQ 85
            G  ++V GA+ GIG E A +L      G  +A    N +GA  + D  N+   +   + 
Sbjct: 6   NGKTAVVTGAASGIGKEIALELARA---GAAVAIADLNQDGANAVADEINKAGGKAIGVA 62

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +D+T E  + A    + E++GS+++L++ +GI
Sbjct: 63  MDVTNEDAVNAGIDKVAERFGSVDILVSNAGI 94

Length = 262

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQL 86
           G V+LV  AS GIGL  A+ L     +G  +A C RN                 +  +  
Sbjct: 1   GKVALVTAASSGIGLAIARALA---REGARVAICARNRENLERAASELRAGGAGVLAVVA 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASG 116
           DLT    I+   +   + +G +++L+N +G
Sbjct: 58  DLTDPEDIDRLVEKAGDAFGRVDILVNNAG 87

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 10/153 (6%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G ++LV GASRGIG   AK L ++     VI + R  +G   + D       + + L  
Sbjct: 7   TGKIALVTGASRGIGEAIAKLLAQQGAH--VIVSSRKLDGCQAVADAIVAAGGKAEALAC 64

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLI-NASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            +     I+A    I+E++G L++L+ NA+      ++L  +T L   +K+      +VN
Sbjct: 65  HIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHIL--DTDLGAFQKT-----VDVN 117

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178
             G   +      L+K  G G   +VA V  +S
Sbjct: 118 IRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS 150

Length = 252

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 40.7 bits (95), Expect = 2e-04
 Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 13/136 (9%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQ 85
           G   L+ GA+ GIG   A  + ++   G V   CRN   A             + + +  
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRG--GTVHMVCRNQTRAEEARKEIETESGNQNIFLHI 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           +D++    +    +  KE+   L++LIN +G +    V + E T + +EK+     +  N
Sbjct: 59  VDMSDPKQVWEFVEEFKEEGKKLHVLINNAGCM----VNKRELTEDGLEKN-----FATN 109

Query: 146 AVGPILVIKHMSPLLK 161
            +G  ++  H+ P+L+
Sbjct: 110 TLGTYILTTHLIPVLE 125

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ G S GIG   A+ L  ++D   V ATCR         D+     E L+  QLD    
Sbjct: 8   LITGCSSGIGAYCARAL--QSDGWRVFATCRKEE------DVAALEAEGLEAFQLDYAEP 59

Query: 92  STIEASAKSIKEKY-GSLNLLIN 113
            +I A    + E   G L+ L N
Sbjct: 60  ESIAALVAQVLELSGGRLDALFN 82

Length = 277

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 11/140 (7%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           G  +LV GA+ GIGL  A+ L      G  V+       GA     +       +  L  
Sbjct: 1   GKTALVTGAASGIGLAIARALAAA---GANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPA 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T E  I     +   ++G L++L+N +GI  +  + +        E    ++A  V  
Sbjct: 58  DVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPP-----EDWDRIIA--VML 110

Query: 147 VGPILVIKHMSPLLKVGGTG 166
                 I+   P +K  G G
Sbjct: 111 TSAFHTIRAALPHMKKQGWG 130

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V L+ GAS GIG   A ++ E      V    RN      L+               D
Sbjct: 371 GKVVLITGASSGIGRATAIKVAEAG--ATVFLVARNGEALDELVAEIRAKGGTAHAYTCD 428

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASG 116
           LT  + ++ + K I  ++G ++ L+N +G
Sbjct: 429 LTDSAAVDHTVKDILAEHGHVDYLVNNAG 457

Length = 657

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 52/193 (26%), Positives = 80/193 (41%), Gaps = 39/193 (20%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
            G V+L+  A++GIG    L FA++         VIAT  N       L    R P  + 
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGAN------VIATDINEE----KLKELERGP-GIT 49

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
              LD+T +  + A AK      G +++L N +G +   ++L         E      A 
Sbjct: 50  TRVLDVTDKEQVAALAKEE----GRIDVLFNCAGFVHHGSILD-------CEDDDWDFAM 98

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GD-NRLGGWHSYRASKA 200
            +N     L+IK + P +      + R    + N+S+   SI G  NR      Y  +KA
Sbjct: 99  NLNVRSMYLMIKAVLPKM------LARKDGSIINMSSVASSIKGVPNRF----VYSTTKA 148

Query: 201 AL-NQCKILAMDF 212
           A+    K +A DF
Sbjct: 149 AVIGLTKSVAADF 161

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 32/158 (20%), Positives = 61/158 (38%), Gaps = 11/158 (6%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQ 85
           KG V+LV G++ GIGL  A+  L       V+    +      +      +   ++    
Sbjct: 1   KGKVALVTGSTSGIGLGIARA-LAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHG 59

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
            DL+  + IE      + ++G +++L+N +GI  +  +   P    + +          +
Sbjct: 60  ADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIA--------L 111

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG 182
           N        +   P +K  G G   ++A V  L A   
Sbjct: 112 NLSAVFHTTRLALPHMKKQGWGRIINIASVHGLVASAN 149

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 29/180 (16%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G  +L+ G + GIGLE A+Q L +  +  V  T R+P     L   +    E   V++ 
Sbjct: 5   QGKTALITGGTSGIGLETARQFLAEGAR--VAITGRDP---ASLEAARAELGESALVIRA 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLL-INASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           D    +  +A A+++ E +G L+ + INA G+        P   L   +++    ++  N
Sbjct: 60  DAGDVAAQKALAQALAEAFGRLDAVFINA-GVA----KFAP---LEDWDEAMFDRSFNTN 111

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVAN--LSARVGSIGDNRLGGWHSYRASKAALN 203
             GP  +I+ + PLL           ++V N  ++A +G    +       Y ASKAAL 
Sbjct: 112 VKGPYFLIQALLPLLA-------NPASIVLNGSINAHIGMPNSS------VYAASKAALL 158

Length = 249

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 39.1 bits (91), Expect = 6e-04
 Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 12/140 (8%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V++V G   GIG +     LE  DK           GA    D        L  +  D
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEE-RGA----DFAEAEGPNLFFVHGD 55

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +  E+ ++    ++ EK G +++L+N +   S   +      L + ++        VN  
Sbjct: 56  VADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILS--SLLLEEWDRI-----LSVNLT 108

Query: 148 GPILVIKHMSPLLKVGGTGI 167
           GP  + ++    L      I
Sbjct: 109 GPYELSRYCRDELIKNKGRI 128

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 39.0 bits (91), Expect = 9e-04
 Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 25/183 (13%)

Query: 23  SVKWKGGVSLVQGASRGIG----LEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP 78
           S+ + G V+LV G + GIG    L FA++  +      V+   R+  G    + L     
Sbjct: 2   SMTFSGKVALVTGGAAGIGRATALAFAREGAK------VVVADRDAAGGEETVALIREAG 55

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
                +  D+T ++ ++A  +     YG L+   N +GI      L   +   + E  ++
Sbjct: 56  GEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGS---EAEFDAI 112

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
           M    VN  G  L +K+  PL+   G G   + A VA L A               Y AS
Sbjct: 113 M---GVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSI---------YAAS 160

Query: 199 KAA 201
           K A
Sbjct: 161 KHA 163

Length = 253

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQ 85
            G V+LV GA++GIG   A+    +      +A             +       R+  + 
Sbjct: 6   AGKVALVTGAAQGIGAAIARAFAREGAA-VALADLDAALAERAAAAIARDVAGARVLAVP 64

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D+T  +++ A+  + +E +G L++L+N +GI
Sbjct: 65  ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGI 96

Length = 260

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 5/90 (5%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATC--RNPNGATGLLDLKNRFPERLDVLQLD 87
           V+LV G  RGIGL  A+ L      G  +A     +                 +     D
Sbjct: 4   VALVTGGRRGIGLGIARALA---AAGFDLAINDRPDDEELAATQQELRALGVEVIFFPAD 60

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +   S  EA   + +  +G ++ L+N +G+
Sbjct: 61  VADLSAHEAMLDAAQAAWGRIDCLVNNAGV 90

Length = 256

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 25/173 (14%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V L+ G S GIG   A     K     V AT R         D++         +QLD+ 
Sbjct: 3   VVLITGCSSGIGRALADAF--KAAGYEVWATARKAE------DVEALAAAGFTAVQLDVN 54

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
             + +   A+ ++ ++G L++LIN +G  ++  +L            ++   +E N    
Sbjct: 55  DGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGV-------EAMRRQFETNVFAV 107

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           + V + + PLL+       R   +V N+ +  G +     G   +Y ASKAA+
Sbjct: 108 VGVTRALFPLLR-------RSRGLVVNIGSVSGVLVTPFAG---AYCASKAAV 150

Length = 274

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 8/93 (8%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPER---LDV 83
            G  +LV G SRG+GL+ A+ L E   +  V+ + R    A  L +              
Sbjct: 11  SGKTALVTGGSRGLGLQIAEALGEAGAR--VVLSARK---AEELEEAAAHLEALGIDALW 65

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
           +  D+  E+ IE  A+   E++G +++L+N +G
Sbjct: 66  IAADVADEADIERLAEETLERFGHVDILVNNAG 98

Length = 259

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 24/178 (13%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPER-LDVL-- 84
           G  +LV GA+RG+G  FA+ L E      V         A    +L              
Sbjct: 7   GKRALVTGAARGLGAAFAEALAE--AGATVAFNDGL---AAEARELAAALEAAGGRAHAI 61

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             DL   ++++    +     G L+ L+N +GI       +  T L+     ++M    V
Sbjct: 62  AADLADPASVQRFFDAAAAALGGLDGLVNNAGIT----NSKSATELDIDTWDAVM---NV 114

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N  G  L+++   P L+  G G      +V NL++     G  +LG   +Y ASK A+
Sbjct: 115 NVRGTFLMLRAALPHLRDSGRG-----RIV-NLASDTALWGAPKLG---AYVASKGAV 163

Length = 250

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 38.3 bits (89), Expect = 0.001
 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           +++G V +V GA++GIG   A++L  +     V+   R+      L ++         V 
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEG--ARVLLVDRSELVHEVLAEILAAGDAAH-VH 57

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
             DL   +  +   ++  E++G +++LIN  G
Sbjct: 58  TADLETYAGAQGVVRAAVERFGRVDVLINNVG 89

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 24/179 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV--L 84
           KG ++L+ GAS GIG   AK   +      V           GL   +      ++    
Sbjct: 9   KGKIALITGASYGIGFAIAKAYAKAGAT-IVFNDINQELVDKGLAAYRE---LGIEAHGY 64

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILS-IPNVLQPETTLNKVEKSSLMLAYE 143
             D+T E  ++A    I+++ G +++L+N +GI+  IP +        +V         +
Sbjct: 65  VCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQV--------ID 116

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           ++   P +V K + P +      I++    + N+ + +  +G   +     Y A+K  L
Sbjct: 117 IDLNAPFIVSKAVIPSM------IKKGHGKIINICSMMSELGRETVSA---YAAAKGGL 166

Length = 265

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 23/185 (12%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN---GATGLL--DLKNRFPERLD 82
           G   ++ GA+ GIG E A++L  +     VI  CR+      A   +  D  N     + 
Sbjct: 1   GKTVIITGANTGIGKETARELARRG--ARVIMACRDMAKCEEAAAEIRRDTLNH---EVI 55

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
           V  LDL    +I A A     +   L++LIN +G++  P             +    + +
Sbjct: 56  VRHLDLASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCP---------YSKTEDGFEMQF 106

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            VN +G  L+   +  LLK         +  V++L+ + G I  + L    SY  +  A 
Sbjct: 107 GVNHLGHFLLTNLLLDLLKKSAPS---RIVNVSSLAHKAGKINFDDLNSEKSYN-TGFAY 162

Query: 203 NQCKI 207
            Q K+
Sbjct: 163 CQSKL 167

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V+LV GA+RGIGL  A  L+ +  +  V+A      G+     +     E    + +D
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQ-VVLADLDRERGSK----VAKALGENAWFIAMD 64

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +  E+ + A    +  ++G L+ L+  + I    N     TTL  +  +       VN  
Sbjct: 65  VADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHN-----TTLESLSLAHWNRVLAVNLT 119

Query: 148 GPILVIKHMSPLLKVGGTGI 167
           GP+L+ KH +P L+     I
Sbjct: 120 GPMLLAKHCAPYLRAHNGAI 139

Length = 255

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 45/180 (25%), Positives = 70/180 (38%), Gaps = 25/180 (13%)

Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
           G  ++ GAS G+GL  AK L  +  +  V+  CR+   A           +   VL  DL
Sbjct: 2   GTVVITGASSGLGLAAAKALARR-GEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDL 60

Query: 89  TVESTIEASAKSIKEKYGSLN-LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
               ++     + +     L+ L+ NA+  + +P   +P  T +  E     L   VN +
Sbjct: 61  ASLDSVRQFVDNFRRTGRPLDALVCNAA--VYLPTAKEPRFTADGFE-----LTVGVNHL 113

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSAR---VGSI-GD-NRLGGWHSYRASKAAL 202
           G  L+              +  D+    N S R   VGSI  + N L G    RA+   L
Sbjct: 114 GHFLLT-----------NLLLEDLQRSENASPRIVIVGSITHNPNTLAGNVPPRATLGDL 162

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 29/181 (16%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCV-IATCRNPNGATGLLDLKNRFPERLDVLQ 85
           K  V +V G + GIG   + +L E+   G + +   R+        +L+   P R + +Q
Sbjct: 6   KDKVVIVTGGASGIGAAISLRLAEE---GAIPVIFGRSAPDDEFAEELRALQP-RAEFVQ 61

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI---LSIPNVLQPETTLNKVEKSSLMLAY 142
           +DLT ++    + +    K+G ++ L+N +G+   + +      E        S      
Sbjct: 62  VDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGL------EAGREAFVAS-----L 110

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           E N +   ++  +  P LK     I        N+S++    G    GG   Y A+K A 
Sbjct: 111 ERNLIHYYVMAHYCLPHLKASRGAI-------VNISSKTALTGQ---GGTSGYAAAKGAQ 160

Query: 203 N 203
            
Sbjct: 161 L 161

Length = 258

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+LV GAS GIG   A++L  +     V    R  +    L  L          L LD+T
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYT--VYGAARRVDKMEDLASLGVH------PLSLDVT 56

Query: 90  VESTIEASAKSIKEKYGSLNLLINASG 116
            E++I+A+  +I  + G +++L+N +G
Sbjct: 57  DEASIKAAVDTIIAEEGRIDVLVNNAG 83

Length = 273

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 3/101 (2%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           K  G  +L+ GA +GIG   A+          ++    +P       +L  R      V 
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLD--ISPEIEKLADELCGRGHRCTAV- 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ 125
             D+   +++ A+ K  KEK G +++L+N +G+  + + L 
Sbjct: 60  VADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLD 100

Length = 263

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 32/183 (17%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V+LV G ++G+G   A+   E+   G VI       G     +L+    + + V Q D
Sbjct: 6   GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFV-QAD 64

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           L+          +  E +G L+ L+NA+G+     +L  +T+    ++     A  VN  
Sbjct: 65  LSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTIL--DTSPELFDR---HFA--VNVR 117

Query: 148 GPIL----VIKHMSPLLKVGGTGIERDVA-VVANLSARVGSIGDNRLGG---WHSYRASK 199
            P       IK M            R     + N    +GS+  +  GG     +Y ASK
Sbjct: 118 APFFLMQEAIKLM----------RRRKAEGTIVN----IGSM--SAHGGQPFLAAYCASK 161

Query: 200 AAL 202
            AL
Sbjct: 162 GAL 164

Length = 260

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 20/194 (10%)

Query: 20  ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFP 78
            ++ +++   V +V G SRGIG    +  +E   K  V+   R       L  +L    P
Sbjct: 1   MASGLRYADKVVIVTGGSRGIGRGIVRAFVENGAK--VVFCARGEAAGQALESELNRAGP 58

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
                +  D+T E  I+       E++G ++ L+N +G         P  T ++      
Sbjct: 59  GSCKFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHP------PHQTTDETSAQEF 112

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
                +N +   L  K+  P L+       +    + NLS+ VGSIG  +      Y A+
Sbjct: 113 RDLLNLNLISYFLASKYALPHLR-------KSQGNIINLSSLVGSIGQKQAA---PYVAT 162

Query: 199 KAALNQ-CKILAMD 211
           K A+    K LA+D
Sbjct: 163 KGAITAMTKALAVD 176

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 12/172 (6%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ GASRGIG   A  L         I   R+   A    D       R  V+  D+  E
Sbjct: 6   LITGASRGIGRATAV-LAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANE 64

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
           + + A   +++  +G L+ L+N +GI++      P   L  ++ + L   ++ N +G  L
Sbjct: 65  ADVIAMFDAVQSAFGRLDALVNNAGIVA------PSMPLADMDAARLRRMFDTNVLGAYL 118

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
             +  +  L     G    +  V+++++R+GS  +     +  Y  SK A++
Sbjct: 119 CAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNE-----YVDYAGSKGAVD 165

Length = 248

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 18/187 (9%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           G V+ V GA  GIG   A  L +   D        R  +G     +       R   +  
Sbjct: 8   GQVAFVTGAGSGIGQRIAIGLAQAGADVALF--DLRTDDGLAETAEHIEAAGRRAIQIAA 65

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T ++ + A+    + + G+L L +NA+GI +      P   + + +  ++M   ++N 
Sbjct: 66  DVTSKADLRAAVARTEAELGALTLAVNAAGIANA----NPAEEMEEEQWQTVM---DINL 118

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA-LNQC 205
            G  L  +  +  +   G G     ++V N+++  G I +  L   H Y ASKA  ++  
Sbjct: 119 TGVFLSCQAEARAMLENGGG-----SIV-NIASMSGIIVNRGLLQAH-YNASKAGVIHLS 171

Query: 206 KILAMDF 212
           K LAM++
Sbjct: 172 KSLAMEW 178

Length = 254

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 24/178 (13%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGL-LDLKNRFPERLDVLQ 85
           G V ++ GAS GIG   A +L      G  +    RN      L  +L +   E L V+ 
Sbjct: 1   GKVVIITGASEGIGRALAVRLARA---GAQLVLAARNETRLASLAQELADHGGEAL-VVP 56

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D++     E   ++   ++G +++L+N +GI          T L+  E+  +M    VN
Sbjct: 57  TDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRF-DELTDLSVFER--VM---RVN 110

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG-DNRLGGWHSYRASKAAL 202
            +G +       P LK           +V  +S+  G  G   R G    Y ASK AL
Sbjct: 111 YLGAVYCTHAALPHLK------ASRGQIVV-VSSLAGLTGVPTRSG----YAASKHAL 157

Length = 263

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 14/120 (11%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
            + G+S G+GL  A+ LL +  +  V+   R+   A    D K   P    VL  DL+  
Sbjct: 11  FITGSSDGLGLAAARTLLHQGHE--VVLHARSQKRAA---DAKAACPGAAGVLIGDLSSL 65

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
           +     A  +    G  + +I+ +GILS PN   P+T +  +          VN + P +
Sbjct: 66  AETRKLADQVNA-IGRFDAVIHNAGILSGPNRKTPDTGIPAM--------VAVNVLAPYV 116

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 22/177 (12%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V LV GASRG+G   A+    +  +  V+   R+   A  +        ER   +Q D+ 
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGAR-VVVNYYRSTESAEAVAAEAG---ERAIAIQADVR 57

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
               ++A  +  K  +G ++ ++N + I    +  Q + T + ++        E    G 
Sbjct: 58  DRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRK-TFDTIDWEDYQQQLEGAVKGA 116

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG----WHSYRASKAAL 202
           + +++ + P  K  G+G             RV +IG N        +H Y  +KAAL
Sbjct: 117 LNLLQAVLPDFKERGSG-------------RVINIGTNLFQNPVVPYHDYTTAKAAL 160

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.98
PRK06139	330	short chain dehydrogenase; Provisional	99.98
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.98
PRK07791	286	short chain dehydrogenase; Provisional	99.98
PRK07478	254	short chain dehydrogenase; Provisional	99.97
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.97
KOG0725	270	consensus Reductases with broad range of substrate	99.97
PRK07063	260	short chain dehydrogenase; Provisional	99.97
PRK05876	275	short chain dehydrogenase; Provisional	99.97
PRK08303	305	short chain dehydrogenase; Provisional	99.97
PRK05867	253	short chain dehydrogenase; Provisional	99.97
PRK08862	227	short chain dehydrogenase; Provisional	99.97
PRK08589	272	short chain dehydrogenase; Validated	99.97
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.97
PRK07062	265	short chain dehydrogenase; Provisional	99.97
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.97
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK06398	258	aldose dehydrogenase; Validated	99.97
PRK06114	254	short chain dehydrogenase; Provisional	99.97
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07109	334	short chain dehydrogenase; Provisional	99.97
PRK05872	296	short chain dehydrogenase; Provisional	99.97
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.97
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.97
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.97
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.97
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.97
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.97
PLN02253	280	xanthoxin dehydrogenase	99.97
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
PRK07677	252	short chain dehydrogenase; Provisional	99.97
PRK07035	252	short chain dehydrogenase; Provisional	99.97
PRK08278	273	short chain dehydrogenase; Provisional	99.97
PRK06194	287	hypothetical protein; Provisional	99.97
PRK06172	253	short chain dehydrogenase; Provisional	99.97
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.97
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07825	273	short chain dehydrogenase; Provisional	99.97
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06128	300	oxidoreductase; Provisional	99.97
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.96
PRK09242	257	tropinone reductase; Provisional	99.96
PRK07985	294	oxidoreductase; Provisional	99.96
PRK05854	313	short chain dehydrogenase; Provisional	99.96
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.96
PRK08265	261	short chain dehydrogenase; Provisional	99.96
PRK05866	293	short chain dehydrogenase; Provisional	99.96
PRK07856	252	short chain dehydrogenase; Provisional	99.96
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.96
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.96
PRK05599	246	hypothetical protein; Provisional	99.96
PRK07814	263	short chain dehydrogenase; Provisional	99.96
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.96
PRK05717	255	oxidoreductase; Validated	99.96
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.96
PRK07024	257	short chain dehydrogenase; Provisional	99.96
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.96
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK12747	252	short chain dehydrogenase; Provisional	99.96
PRK08643	256	acetoin reductase; Validated	99.96
PRK07576	264	short chain dehydrogenase; Provisional	99.96
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.96
PRK07890	258	short chain dehydrogenase; Provisional	99.96
PRK07831	262	short chain dehydrogenase; Provisional	99.96
PRK06523	260	short chain dehydrogenase; Provisional	99.96
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.96
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06138	252	short chain dehydrogenase; Provisional	99.96
PRK05855	582	short chain dehydrogenase; Validated	99.96
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.96
PRK06484	520	short chain dehydrogenase; Validated	99.96
PRK12743	256	oxidoreductase; Provisional	99.96
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.96
PRK08628	258	short chain dehydrogenase; Provisional	99.96
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.96
PRK06483	236	dihydromonapterin reductase; Provisional	99.96
PRK07067	257	sorbitol dehydrogenase; Provisional	99.96
PRK05993	277	short chain dehydrogenase; Provisional	99.96
PRK06125	259	short chain dehydrogenase; Provisional	99.96
PRK06841	255	short chain dehydrogenase; Provisional	99.96
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.96
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.96
PLN02780	320	ketoreductase/ oxidoreductase	99.96
PRK09134	258	short chain dehydrogenase; Provisional	99.96
PRK05650	270	short chain dehydrogenase; Provisional	99.96
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.96
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.96
PRK06182	273	short chain dehydrogenase; Validated	99.96
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.96
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK06701	290	short chain dehydrogenase; Provisional	99.95
PRK09072	263	short chain dehydrogenase; Provisional	99.95
PRK06180	277	short chain dehydrogenase; Provisional	99.95
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.95
PRK07774	250	short chain dehydrogenase; Provisional	99.95
PRK06179	270	short chain dehydrogenase; Provisional	99.95
PRK08226	263	short chain dehydrogenase; Provisional	99.95
PRK07454	241	short chain dehydrogenase; Provisional	99.95
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.95
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.95
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.95
PRK06484	520	short chain dehydrogenase; Validated	99.95
PRK08263	275	short chain dehydrogenase; Provisional	99.95
PRK07904	253	short chain dehydrogenase; Provisional	99.95
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK12937	245	short chain dehydrogenase; Provisional	99.95
PRK08267	260	short chain dehydrogenase; Provisional	99.95
PRK12939	250	short chain dehydrogenase; Provisional	99.95
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.95
PRK06500	249	short chain dehydrogenase; Provisional	99.95
PRK06197	306	short chain dehydrogenase; Provisional	99.95
PRK08703	239	short chain dehydrogenase; Provisional	99.95
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.95
PRK06949	258	short chain dehydrogenase; Provisional	99.95
PRK12744	257	short chain dehydrogenase; Provisional	99.95
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.95
PRK09186	256	flagellin modification protein A; Provisional	99.95
PRK05875	276	short chain dehydrogenase; Provisional	99.95
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.95
PRK07832	272	short chain dehydrogenase; Provisional	99.95
PRK08251	248	short chain dehydrogenase; Provisional	99.95
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.95
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.95
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.95
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.95
KOG1208	314	consensus Dehydrogenases with different specificit	99.95
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.95
PLN00015	308	protochlorophyllide reductase	99.95
PRK06914	280	short chain dehydrogenase; Provisional	99.95
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.95
PRK06198	260	short chain dehydrogenase; Provisional	99.95
PRK06196	315	oxidoreductase; Provisional	99.95
PRK12746	254	short chain dehydrogenase; Provisional	99.95
PRK06482	276	short chain dehydrogenase; Provisional	99.95
PRK06123	248	short chain dehydrogenase; Provisional	99.95
PRK07775	274	short chain dehydrogenase; Provisional	99.94
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK06057	255	short chain dehydrogenase; Provisional	99.94
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.94
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.94
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.94
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK10538	248	malonic semialdehyde reductase; Provisional	99.94
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK07069	251	short chain dehydrogenase; Validated	99.94
PRK05693	274	short chain dehydrogenase; Provisional	99.94
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.94
PRK07201	657	short chain dehydrogenase; Provisional	99.94
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.94
PRK06940	275	short chain dehydrogenase; Provisional	99.94
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK06181	263	short chain dehydrogenase; Provisional	99.94
PRK07326	237	short chain dehydrogenase; Provisional	99.94
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.94
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.94
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK12827	249	short chain dehydrogenase; Provisional	99.94
COG1028	251	FabG Dehydrogenases with different specificities (	99.93
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK06924	251	short chain dehydrogenase; Provisional	99.93
PRK07102	243	short chain dehydrogenase; Provisional	99.93
PRK07023	243	short chain dehydrogenase; Provisional	99.93
PRK12828	239	short chain dehydrogenase; Provisional	99.93
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.93
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.93
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.93
PRK07074	257	short chain dehydrogenase; Provisional	99.93
PRK12829	264	short chain dehydrogenase; Provisional	99.93
PRK06101	240	short chain dehydrogenase; Provisional	99.93
PRK09291	257	short chain dehydrogenase; Provisional	99.93
PRK08264	238	short chain dehydrogenase; Validated	99.93
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.93
PRK07578	199	short chain dehydrogenase; Provisional	99.93
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK12742	237	oxidoreductase; Provisional	99.93
PRK09135	249	pteridine reductase; Provisional	99.93
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK05884	223	short chain dehydrogenase; Provisional	99.92
PRK08177	225	short chain dehydrogenase; Provisional	99.92
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.92
PRK08324	681	short chain dehydrogenase; Validated	99.92
PRK07806	248	short chain dehydrogenase; Provisional	99.92
PRK07577	234	short chain dehydrogenase; Provisional	99.92
PRK07060	245	short chain dehydrogenase; Provisional	99.92
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.92
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK08017	256	oxidoreductase; Provisional	99.91
PRK12367	245	short chain dehydrogenase; Provisional	99.91
PRK07041	230	short chain dehydrogenase; Provisional	99.91
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.91
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.91
PRK06953	222	short chain dehydrogenase; Provisional	99.9
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.89
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.89
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.89
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.88
PRK08219	227	short chain dehydrogenase; Provisional	99.87
PRK06720	169	hypothetical protein; Provisional	99.86
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.83
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.81
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.8
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.8
PLN02653	340	GDP-mannose 4,6-dehydratase	99.78
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.77
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.77
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.75
PLN02572	442	UDP-sulfoquinovose synthase	99.75
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.75
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.73
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.73
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.73
PLN00198	338	anthocyanidin reductase; Provisional	99.73
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.73
PLN02240	352	UDP-glucose 4-epimerase	99.73
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.72
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.71
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.7
PLN02650	351	dihydroflavonol-4-reductase	99.7
PLN02214	342	cinnamoyl-CoA reductase	99.7
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.68
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.67
PLN03209	576	translocon at the inner envelope of chloroplast su	99.66
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.65
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.64
PLN02583	297	cinnamoyl-CoA reductase	99.63
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.62
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.6
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.6
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.59
PLN02427	386	UDP-apiose/xylose synthase	99.55
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.55
PLN02260	668	probable rhamnose biosynthetic enzyme	99.54
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.53
PLN02686	367	cinnamoyl-CoA reductase	99.51
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.51
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.5
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.5
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.49
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.46
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.45
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.45
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.45
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.43
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.42
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.41
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.4
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.4
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.37
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.37
PLN02206	442	UDP-glucuronate decarboxylase	99.36
CHL00194	317	ycf39 Ycf39; Provisional	99.35
PLN02996	491	fatty acyl-CoA reductase	99.33
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.33
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.32
PLN02778	298	3,5-epimerase/4-reductase	99.31
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.25
PRK07201	657	short chain dehydrogenase; Provisional	99.24
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.24
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.2
PLN02260	668	probable rhamnose biosynthetic enzyme	99.17
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.15
PRK05865	854	hypothetical protein; Provisional	99.15
PRK08309	177	short chain dehydrogenase; Provisional	99.13
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.12
PLN02503	605	fatty acyl-CoA reductase 2	99.07
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.07
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.05
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.99
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.96
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.93
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.9
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.9
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.86
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.82
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.81
PRK12320	699	hypothetical protein; Provisional	98.78
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.71
PLN00016	378	RNA-binding protein; Provisional	98.65
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.61
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.61
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.54
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.42
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.34
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.3
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.3
PRK09620	229	hypothetical protein; Provisional	98.3
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.29
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.28
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.23
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.2
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.18
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.17
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.15
PRK14982	340	acyl-ACP reductase; Provisional	98.1
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.01
PLN00106	323	malate dehydrogenase	98.0
PTZ00325	321	malate dehydrogenase; Provisional	97.95
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.91
KOG2774	366	consensus NAD dependent epimerase [General functio	97.85
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.78
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.73
COG2910	211	Putative NADH-flavin reductase [General function p	97.73
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.72
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.59
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.56
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.52
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.48
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.45
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.33
PRK05086	312	malate dehydrogenase; Provisional	97.27
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.26
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.26
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.25
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.21
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.18
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.17
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.13
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.13
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.09
PRK06849	389	hypothetical protein; Provisional	97.07
COG3268	382	Uncharacterized conserved protein [Function unknow	97.07
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.04
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.03
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.02
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.02
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.01
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.95
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.9
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.84
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.84
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.82
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.81
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.8
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.77
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.76
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.72
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.69
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.63
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.61
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.6
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.6
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.59
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.56
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.56
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.55
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.51
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.5
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.49
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.45
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.43
PRK14968	188	putative methyltransferase; Provisional	96.43
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.42
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.4
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.4
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.36
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.36
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.34
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.32
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.3
PLN00203	519	glutamyl-tRNA reductase	96.3
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.26
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.26
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.23
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.23
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.2
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.18
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.16
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.05
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.03
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.01
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.01
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.98
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.95
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.93
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.93
PRK05442	326	malate dehydrogenase; Provisional	95.92
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	95.91
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.86
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.81
PRK04148	134	hypothetical protein; Provisional	95.8
PRK08223	287	hypothetical protein; Validated	95.79
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.78
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.76
PRK09496	453	trkA potassium transporter peripheral membrane com	95.75
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.74
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.74
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.73
PLN02602	350	lactate dehydrogenase	95.72
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	95.69
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.67
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.66
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.65
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.63
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.62
PTZ00117	319	malate dehydrogenase; Provisional	95.61
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.6
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.58
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.5
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.48
PRK14851	679	hypothetical protein; Provisional	95.45
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.44
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.31
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.31
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.27
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.27
PRK08328	231	hypothetical protein; Provisional	95.25
PLN03139	386	formate dehydrogenase; Provisional	95.21
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.2
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.2
PLN02740	381	Alcohol dehydrogenase-like	95.19
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.16
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.07
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.03
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.02
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.01
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.0
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	94.94
PRK13243	333	glyoxylate reductase; Reviewed	94.88
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.88
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	94.84
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	94.8
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	94.77
PRK13403	335	ketol-acid reductoisomerase; Provisional	94.76
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.75
PRK09496	453	trkA potassium transporter peripheral membrane com	94.75
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.73
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.73
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.72
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.7
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	94.68
PRK15116	268	sulfur acceptor protein CsdL; Provisional	94.65
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.61
PRK12480	330	D-lactate dehydrogenase; Provisional	94.58
PRK07574	385	formate dehydrogenase; Provisional	94.58
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.57
PRK07877	722	hypothetical protein; Provisional	94.56
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.55
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	94.52
PLN02827	378	Alcohol dehydrogenase-like	94.47
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	94.47
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.42
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.41
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.38
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.38
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.35
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.35
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.31
PRK14852	989	hypothetical protein; Provisional	94.26
PRK06487	317	glycerate dehydrogenase; Provisional	94.23
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.2
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.2
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	94.17
PRK07411	390	hypothetical protein; Validated	94.12
PRK10669	558	putative cation:proton antiport protein; Provision	94.12
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.1
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	94.1
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	94.08
PLN02494	477	adenosylhomocysteinase	94.05
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	94.04
PRK08655	437	prephenate dehydrogenase; Provisional	94.04
PRK14967	223	putative methyltransferase; Provisional	93.97
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	93.93
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	93.91
COG5322	351	Predicted dehydrogenase [General function predicti	93.9
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	93.88
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	93.86
PRK00048	257	dihydrodipicolinate reductase; Provisional	93.79
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	93.77
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	93.75
PTZ00354	334	alcohol dehydrogenase; Provisional	93.68
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	93.68
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	93.64
PLN02928	347	oxidoreductase family protein	93.62
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	93.59
PRK13771	334	putative alcohol dehydrogenase; Provisional	93.53
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	93.52
PRK06932	314	glycerate dehydrogenase; Provisional	93.52
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	93.51
PLN02586	360	probable cinnamyl alcohol dehydrogenase	93.51
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.5
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.49
PRK15128	396	23S rRNA m(5)C1962 methyltransferase; Provisional	93.47
TIGR02130	275	dapB_plant dihydrodipicolinate reductase. This nar	93.44

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.7e-37  Score=247.76  Aligned_cols=173  Identities=23%  Similarity=0.322  Sum_probs=156.2

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC-CC-ceeEEEecCCCHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PE-RLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ...++++|+|+|||||+|||.++|++|+++|++  ++++.|..++++++.+.+.+. .. +++.++||++|+++++++++
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~--l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~   83 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAK--LVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVE   83 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCc--eEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHH
Confidence            346789999999999999999999999999998  999999999988874544433 33 49999999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++..++|++|+||||||...       ....++.+.+++.+.|++|++|+.+++|+++|+|++++.|      .||++||
T Consensus        84 ~~~~~fg~vDvLVNNAG~~~-------~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~G------hIVvisS  150 (282)
T KOG1205|consen   84 WAIRHFGRVDVLVNNAGISL-------VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDG------HIVVISS  150 (282)
T ss_pred             HHHHhcCCCCEEEecCcccc-------ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCC------eEEEEec
Confidence            99999999999999999875       5677888899999999999999999999999999998865      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ++|..+   +|....|++||+|+.+|+++| .|+
T Consensus       151 iaG~~~---~P~~~~Y~ASK~Al~~f~etLR~El  181 (282)
T KOG1205|consen  151 IAGKMP---LPFRSIYSASKHALEGFFETLRQEL  181 (282)
T ss_pred             cccccC---CCcccccchHHHHHHHHHHHHHHHh
Confidence            999999   677789999999999999999 665

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3.9e-37  Score=237.95  Aligned_cols=166  Identities=26%  Similarity=0.356  Sum_probs=154.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++|+++|||||+|||.++|++|++.|++  |++..|+.++++.+.+.+..  .++..+..|++|.++++.+++.+.+.
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~--vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~   78 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAK--VVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEE   78 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCe--EEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHh
Confidence            457799999999999999999999999998  99999999887776555543  67899999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      |+++|+||||||...       ..++.+.+.++|+.++++|+.|.++.+++++|.|.+++.|      .|||+||++|..
T Consensus        79 ~g~iDiLvNNAGl~~-------g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G------~IiN~~SiAG~~  145 (246)
T COG4221          79 FGRIDILVNNAGLAL-------GDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSG------HIINLGSIAGRY  145 (246)
T ss_pred             hCcccEEEecCCCCc-------CChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCc------eEEEeccccccc
Confidence            999999999999985       5889999999999999999999999999999999999887      999999999999


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   +++...|+++|+++.+|++.|+
T Consensus       146 ~---y~~~~vY~ATK~aV~~fs~~LR  168 (246)
T COG4221         146 P---YPGGAVYGATKAAVRAFSLGLR  168 (246)
T ss_pred             c---CCCCccchhhHHHHHHHHHHHH
Confidence            8   6999999999999999999993

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1e-35  Score=235.84  Aligned_cols=172  Identities=20%  Similarity=0.319  Sum_probs=160.9

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +..+.+|++||||||++|+|+++|.+|+++|+.  ++++|.|.+..++..+.+++.| ++..+.||+++.+++.+..+++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~--~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAK--LVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCe--EEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHH
Confidence            568899999999999999999999999999997  9999999999888877777664 8999999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      ++..|++|++|||||+..       ..++.+.+.+++++.+++|+.|+|+.+|+++|.|.+++.|      .||+++|++
T Consensus       109 k~e~G~V~ILVNNAGI~~-------~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~G------HIV~IaS~a  175 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVT-------GKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNG------HIVTIASVA  175 (300)
T ss_pred             HHhcCCceEEEecccccc-------CCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCc------eEEEehhhh
Confidence            999999999999999985       6778889999999999999999999999999999998887      999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+   .++-..|++||+|+.+|+++| +|+
T Consensus       176 G~~g---~~gl~~YcaSK~a~vGfhesL~~EL  204 (300)
T KOG1201|consen  176 GLFG---PAGLADYCASKFAAVGFHESLSMEL  204 (300)
T ss_pred             cccC---CccchhhhhhHHHHHHHHHHHHHHH
Confidence            9999   688999999999999999999 554

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=7.6e-36  Score=236.57  Aligned_cols=170  Identities=23%  Similarity=0.299  Sum_probs=157.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh-cCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .+++++++|||||+|||.++|++|+++|++  ||++.|++++++++.+.++ +.+..+.++++|+++++++.++.+++.+
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~--liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~   80 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYN--LILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKE   80 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHh
Confidence            467899999999999999999999999998  9999999999988665554 4556899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      ...++|+||||||+..       .+++.+.+.++.++++++|+.++..++++++|.|.+++.|      .||||+|.+|.
T Consensus        81 ~~~~IdvLVNNAG~g~-------~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G------~IiNI~S~ag~  147 (265)
T COG0300          81 RGGPIDVLVNNAGFGT-------FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAG------HIINIGSAAGL  147 (265)
T ss_pred             cCCcccEEEECCCcCC-------ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------eEEEEechhhc
Confidence            9889999999999985       6789999999999999999999999999999999999887      99999999999


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .|..+.|++||+++.+|+++| .|+
T Consensus       148 ~p---~p~~avY~ATKa~v~~fSeaL~~EL  174 (265)
T COG0300         148 IP---TPYMAVYSATKAFVLSFSEALREEL  174 (265)
T ss_pred             CC---CcchHHHHHHHHHHHHHHHHHHHHh
Confidence            98   689999999999999999999 443

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-32  Score=219.97  Aligned_cols=171  Identities=13%  Similarity=0.170  Sum_probs=148.4

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-CCCceeEEEecCCCHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ++++++|+++||||++|||.++|++|+++|++  |++++|+.++++...+.+.+ .+.++.++++|++|+++++++++++
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   80 (263)
T PRK08339          3 KIDLSGKLAFTTASSKGIGFGVARVLARAGAD--VILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKEL   80 (263)
T ss_pred             ccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            45689999999999999999999999999997  99999988776655444432 2457889999999999999999998


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      . .++++|++|||+|...       ..++.+.+.++|++.+++|+.+++++++.++|+|++++.|      +||++||..
T Consensus        81 ~-~~g~iD~lv~nag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g------~Ii~isS~~  146 (263)
T PRK08339         81 K-NIGEPDIFFFSTGGPK-------PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFG------RIIYSTSVA  146 (263)
T ss_pred             H-hhCCCcEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEEcCcc
Confidence            6 5899999999999754       3566788999999999999999999999999999887665      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .+++..|+++|+|+.+|++++ .||
T Consensus       147 ~~~~---~~~~~~y~asKaal~~l~~~la~el  175 (263)
T PRK08339        147 IKEP---IPNIALSNVVRISMAGLVRTLAKEL  175 (263)
T ss_pred             ccCC---CCcchhhHHHHHHHHHHHHHHHHHh
Confidence            8776   577889999999999999999 544

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.4e-32  Score=206.11  Aligned_cols=168  Identities=23%  Similarity=0.292  Sum_probs=145.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++.|.|+|||||++|||+++|++|.+.|-.  ||+++|+++.++++.+.    ...++...||+.|.++++++++++++
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~--VIi~gR~e~~L~e~~~~----~p~~~t~v~Dv~d~~~~~~lvewLkk   74 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNT--VIICGRNEERLAEAKAE----NPEIHTEVCDVADRDSRRELVEWLKK   74 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCE--EEEecCcHHHHHHHHhc----CcchheeeecccchhhHHHHHHHHHh
Confidence            4678999999999999999999999999987  99999999887665433    34688899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .||.++++|||||+....+.     .-.+...+..++-+++|+.+++++++.++|++.+++.+      .|||+||-.+.
T Consensus        75 ~~P~lNvliNNAGIqr~~dl-----t~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a------~IInVSSGLaf  143 (245)
T COG3967          75 EYPNLNVLINNAGIQRNEDL-----TGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEA------TIINVSSGLAF  143 (245)
T ss_pred             hCCchheeeecccccchhhc-----cCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc------eEEEecccccc
Confidence            99999999999999863211     11344455566779999999999999999999999876      99999998888


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      .+   +.....||++|||+++|+.+|++
T Consensus       144 vP---m~~~PvYcaTKAaiHsyt~aLR~  168 (245)
T COG3967         144 VP---MASTPVYCATKAAIHSYTLALRE  168 (245)
T ss_pred             Cc---ccccccchhhHHHHHHHHHHHHH
Confidence            77   67778999999999999999954

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.1e-32  Score=220.28  Aligned_cols=172  Identities=20%  Similarity=0.279  Sum_probs=141.8

Q ss_pred             ccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      |.+++|+++||||+  +|||+++|++|+++|++  |++.+|+.+..+.+.+...+.+.. .+++||++|.++++++++++
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~--Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i   77 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAE--LAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESL   77 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCE--EEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHH
Confidence            45789999999997  79999999999999997  888898853222233333333334 67899999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|++|||||......   ...++.+.+.++|++.+++|+.+++++++.++|+|+++  |      +|||+||..
T Consensus        78 ~~~~g~iDilVnnAG~~~~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g------~Iv~isS~~  146 (274)
T PRK08415         78 KKDLGKIDFIVHSVAFAPKEA---LEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--A------SVLTLSYLG  146 (274)
T ss_pred             HHHcCCCCEEEECCccCcccc---cccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--C------cEEEEecCC
Confidence            999999999999999753100   12456788999999999999999999999999999753  3      999999988


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .+++..|++||+|+.+|+++| .||
T Consensus       147 ~~~~---~~~~~~Y~asKaal~~l~~~la~el  175 (274)
T PRK08415        147 GVKY---VPHYNVMGVAKAALESSVRYLAVDL  175 (274)
T ss_pred             CccC---CCcchhhhhHHHHHHHHHHHHHHHh
Confidence            8766   577889999999999999999 444

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.4e-32  Score=217.30  Aligned_cols=177  Identities=18%  Similarity=0.231  Sum_probs=145.6

Q ss_pred             cccccccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHH
Q 028056           19 SASASVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      |+.+.+++++|+++||||+  +|||+++|++|+++|++  |++.+|+....+.+.+...+. ....+++||++|++++++
T Consensus         1 ~~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~--v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~   77 (258)
T PRK07533          1 PMQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAE--LAVTYLNDKARPYVEPLAEEL-DAPIFLPLDVREPGQLEA   77 (258)
T ss_pred             CCCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCE--EEEEeCChhhHHHHHHHHHhh-ccceEEecCcCCHHHHHH
Confidence            4567788999999999998  59999999999999997  888899865433233333222 235688999999999999


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      +++++.++++++|++|||||.....   ....++.+.+.++|++.+++|+.+++++++.++|+|++.  |      +||+
T Consensus        78 ~~~~~~~~~g~ld~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~--g------~Ii~  146 (258)
T PRK07533         78 VFARIAEEWGRLDFLLHSIAFAPKE---DLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG--G------SLLT  146 (258)
T ss_pred             HHHHHHHHcCCCCEEEEcCccCCcc---cccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC--C------EEEE
Confidence            9999999999999999999975310   012456788999999999999999999999999999642  3      9999


Q ss_pred             eecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          177 LSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       177 iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +||..+..+   .+++..|+++|+|+.+|+++| .|+
T Consensus       147 iss~~~~~~---~~~~~~Y~asKaal~~l~~~la~el  180 (258)
T PRK07533        147 MSYYGAEKV---VENYNLMGPVKAALESSVRYLAAEL  180 (258)
T ss_pred             EeccccccC---CccchhhHHHHHHHHHHHHHHHHHh
Confidence            999887665   578889999999999999999 444

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=214.99  Aligned_cols=168  Identities=17%  Similarity=0.249  Sum_probs=144.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||++|||+++|++|+++|++  |++.+|+..  +...+...+.+.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~--vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGAD--IVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVE   79 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999997  888887542  233344444566889999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||...       ..++.+.++++|++.+++|+.+++.+++.++++|++++.+     ++||++||..+.
T Consensus        80 ~~g~iD~lv~~ag~~~-------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~-----g~ii~isS~~~~  147 (251)
T PRK12481         80 VMGHIDILINNAGIIR-------RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNG-----GKIINIASMLSF  147 (251)
T ss_pred             HcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCC-----CEEEEeCChhhc
Confidence            9999999999999864       4566788899999999999999999999999999765422     399999999888


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++|+++++
T Consensus       148 ~~---~~~~~~Y~asK~a~~~l~~~la  171 (251)
T PRK12481        148 QG---GIRVPSYTASKSAVMGLTRALA  171 (251)
T ss_pred             CC---CCCCcchHHHHHHHHHHHHHHH
Confidence            76   4667899999999999999984

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.98  E-value=5.1e-32  Score=203.73  Aligned_cols=161  Identities=30%  Similarity=0.488  Sum_probs=143.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC--CCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN--PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      |+++||||++|||++++++|+++|+. +|++++|+  .+..+.+.+.+...+.++.+++||++++++++++++++.+.++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~-~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGAR-VVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTE-EEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCce-EEEEeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence            79999999999999999999999886 69999998  3334444444555568899999999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|++|||+|...       ..++.+.+.++|++++++|+.+++++.+.+.|  +.  .      +.||++||..+..+ 
T Consensus        80 ~ld~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~--~------g~iv~~sS~~~~~~-  141 (167)
T PF00106_consen   80 PLDILINNAGIFS-------DGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QG--G------GKIVNISSIAGVRG-  141 (167)
T ss_dssp             SESEEEEECSCTT-------SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HT--T------EEEEEEEEGGGTSS-
T ss_pred             ccccccccccccc-------ccccccccchhhhhccccccceeeeeeehhee--cc--c------cceEEecchhhccC-
Confidence            9999999999975       67788899999999999999999999999999  22  3      49999999999998 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .+++..|+++|+|+++|+++++
T Consensus       142 --~~~~~~Y~askaal~~~~~~la  163 (167)
T PF00106_consen  142 --SPGMSAYSASKAALRGLTQSLA  163 (167)
T ss_dssp             --STTBHHHHHHHHHHHHHHHHHH
T ss_pred             --CCCChhHHHHHHHHHHHHHHHH
Confidence              6899999999999999999994

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1e-31  Score=223.03  Aligned_cols=171  Identities=18%  Similarity=0.233  Sum_probs=153.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|++|||||++|||++++++|+++|++  |++++|+++.++++.+.+.+.+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~--Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGAR--LVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  99999998887776666666677888999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||...       ..++.+.+.+++++.+++|+.+++.+++.++|+|++++.|      .|||++|..+.
T Consensus        81 ~~g~iD~lVnnAG~~~-------~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g------~iV~isS~~~~  147 (330)
T PRK06139         81 FGGRIDVWVNNVGVGA-------VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHG------IFINMISLGGF  147 (330)
T ss_pred             hcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCC------EEEEEcChhhc
Confidence            8899999999999864       4667888999999999999999999999999999987665      99999999887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+++.+|+++| .|+
T Consensus       148 ~~---~p~~~~Y~asKaal~~~~~sL~~El  174 (330)
T PRK06139        148 AA---QPYAAAYSASKFGLRGFSEALRGEL  174 (330)
T ss_pred             CC---CCCchhHHHHHHHHHHHHHHHHHHh
Confidence            77   578899999999999999999 454

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.98  E-value=1.8e-31  Score=216.21  Aligned_cols=172  Identities=17%  Similarity=0.224  Sum_probs=141.8

Q ss_pred             ccccCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~--giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++|++|||||++  |||+++|++|+++|++  |++.+|+....+...++..+.+. ..+++||++|.++++++++++
T Consensus         3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~--V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~   79 (271)
T PRK06505          3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAE--LAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEAL   79 (271)
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCE--EEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHH
Confidence            347899999999997  9999999999999997  88888875433333333333232 357899999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++++|++|||||.....+   ...++.+.+.++|++.+++|+.++++++|+++|+|++.  |      +||++||..
T Consensus        80 ~~~~g~iD~lVnnAG~~~~~~---~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~--G------~Iv~isS~~  148 (271)
T PRK06505         80 EKKWGKLDFVVHAIGFSDKNE---LKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDG--G------SMLTLTYGG  148 (271)
T ss_pred             HHHhCCCCEEEECCccCCCcc---ccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccC--c------eEEEEcCCC
Confidence            999999999999999753100   01467788999999999999999999999999999742  3      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .+++..|+++|+|+.+|+++| .||
T Consensus       149 ~~~~---~~~~~~Y~asKaAl~~l~r~la~el  177 (271)
T PRK06505        149 STRV---MPNYNVMGVAKAALEASVRYLAADY  177 (271)
T ss_pred             cccc---CCccchhhhhHHHHHHHHHHHHHHH
Confidence            8766   578889999999999999999 544

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.2e-31  Score=217.22  Aligned_cols=176  Identities=20%  Similarity=0.254  Sum_probs=147.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC---------CCcccccchhhcCCCceeEEEecCCCHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP---------NGATGLLDLKNRFPERLDVLQLDLTVESTIE   95 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~   95 (214)
                      .+++|+++||||++|||.++|++|+++|++  |++.+++.         +.++...+.+...+.++.++.+|++|+++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~--vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~   80 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGAR--VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAA   80 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHH
Confidence            368999999999999999999999999997  88887765         3344444444445667889999999999999


Q ss_pred             HHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEE
Q 028056           96 ASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVA  175 (214)
Q Consensus        96 ~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv  175 (214)
                      ++++++.+.++++|++|||||...       ..++.+.+.++|++.+++|+.+++++++.++|+|+++........++||
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv  153 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAGILR-------DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARII  153 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEE
Confidence            999999999999999999999864       4567788999999999999999999999999999764311111125999


Q ss_pred             EeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          176 NLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       176 ~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ++||..+..+   .+++..|+++|+|+++|++++ .||
T Consensus       154 ~isS~~~~~~---~~~~~~Y~asKaal~~l~~~la~el  188 (286)
T PRK07791        154 NTSSGAGLQG---SVGQGNYSAAKAGIAALTLVAAAEL  188 (286)
T ss_pred             EeCchhhCcC---CCCchhhHHHHHHHHHHHHHHHHHH
Confidence            9999998887   578899999999999999999 443

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-31  Score=213.50  Aligned_cols=172  Identities=24%  Similarity=0.309  Sum_probs=150.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||++|||.+++++|+++|++  |++.+|++++++.+.+.+...+.++.++.||++++++++++++++.+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAK--VVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  99999998777666555555566788999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +++++|++|||||...      +..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||..+.
T Consensus        80 ~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~------~iv~~sS~~~~  147 (254)
T PRK07478         80 RFGGLDIAFNNAGTLG------EMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGG------SLIFTSTFVGH  147 (254)
T ss_pred             hcCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------eEEEEechHhh
Confidence            9999999999999864      23567788899999999999999999999999999887655      99999998876


Q ss_pred             C-CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 I-GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~-~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      . +   .+++..|++||++++.+++++ .|+
T Consensus       148 ~~~---~~~~~~Y~~sK~a~~~~~~~la~e~  175 (254)
T PRK07478        148 TAG---FPGMAAYAASKAGLIGLTQVLAAEY  175 (254)
T ss_pred             ccC---CCCcchhHHHHHHHHHHHHHHHHHH
Confidence            3 3   577889999999999999999 443

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=3.2e-31  Score=212.49  Aligned_cols=170  Identities=21%  Similarity=0.255  Sum_probs=141.2

Q ss_pred             ccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++|+++||||+  +|||+++|++|+++|++  |++.+|+. +.++..+..  .+.++.+++||++|+++++++++++
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~--Vi~~~r~~-~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGAT--VIYTYQND-RMKKSLQKL--VDEEDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCE--EEEecCch-HHHHHHHhh--ccCceeEEeCCCCCHHHHHHHHHHH
Confidence            45789999999999  79999999999999997  88889874 222211111  1346788999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++++|++|||||......   ...++.+.+.++|++.+++|+.+++++++.++|+|.+.  |      +||+++|..
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~---~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~--g------~Iv~iss~~  146 (252)
T PRK06079         78 KERVGKIDGIVHAIAYAKKEE---LGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPG--A------SIVTLTYFG  146 (252)
T ss_pred             HHHhCCCCEEEEccccccccc---ccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccC--c------eEEEEeccC
Confidence            999999999999999764100   12567788999999999999999999999999998642  3      999999988


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .+++..|+++|+|+.+|+++| .||
T Consensus       147 ~~~~---~~~~~~Y~asKaal~~l~~~la~el  175 (252)
T PRK06079        147 SERA---IPNYNVMGIAKAALESSVRYLARDL  175 (252)
T ss_pred             cccc---CCcchhhHHHHHHHHHHHHHHHHHh
Confidence            8776   578899999999999999999 444

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=5e-31  Score=212.03  Aligned_cols=173  Identities=18%  Similarity=0.262  Sum_probs=142.9

Q ss_pred             ccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC-CCceeEEEecCCCHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        24 ~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      +++++|+++||||+  +|||+++|++|+++|++  |++.+|+....+.+++...+. +.++.+++||++|++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAK--LVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCE--EEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            56789999999997  89999999999999997  888887643323333333322 45788999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|++|||||......   ...++.+.+.++|++.+++|+.+++.+++.++|+|.+.  |      +|||+||.
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--g------~Iv~isS~  149 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKED---LRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG--G------SIVTLTYL  149 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCc---CCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC--c------eEEEEccc
Confidence            9999999999999999753100   12456788899999999999999999999999999652  3      99999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+..+   .+++..|+++|+|+.+|++++ .||
T Consensus       150 ~~~~~---~~~~~~Y~asKaal~~l~~~la~el  179 (257)
T PRK08594        150 GGERV---VQNYNVMGVAKASLEASVKYLANDL  179 (257)
T ss_pred             CCccC---CCCCchhHHHHHHHHHHHHHHHHHh
Confidence            88776   577889999999999999999 554

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.97  E-value=8.5e-31  Score=210.78  Aligned_cols=173  Identities=20%  Similarity=0.246  Sum_probs=141.6

Q ss_pred             ccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCC--cccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        24 ~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      +++++|+++||||+  +|||+++|++|+++|++  |++.+++.+.  .++..+.+.+...++.++++|++|+++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAE--LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCE--EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHH
Confidence            45789999999986  89999999999999998  7777665432  222222232233457789999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|++|||||.....   ....++.+.+.++|++.+++|+.+++++++.++|.|++.  |      +||++||
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~---~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~--g------~Iv~isS  148 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKE---ELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG--G------SIVTLTY  148 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcc---cccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC--C------eEEEEec
Confidence            9999999999999999975310   012467788999999999999999999999999999753  3      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+   .+++..|+++|+|+.+|+++| .||
T Consensus       149 ~~~~~~---~~~~~~Y~asKaal~~l~~~la~el  179 (258)
T PRK07370        149 LGGVRA---IPNYNVMGVAKAALEASVRYLAAEL  179 (258)
T ss_pred             cccccC---CcccchhhHHHHHHHHHHHHHHHHh
Confidence            888766   578899999999999999999 554

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.97  E-value=6.4e-31  Score=211.89  Aligned_cols=174  Identities=24%  Similarity=0.302  Sum_probs=148.0

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC---CCceeEEEecCCCHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF---PERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ...++||+++|||+++|||+++|++|++.|++  |++++|+++.++...+.+...   +.++..+.||++++++++++++
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~--v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~   80 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAK--VVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVE   80 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHH
Confidence            36789999999999999999999999999998  999999998877654443332   3469999999999999999999


Q ss_pred             HHHHH-cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechh-HHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056          100 SIKEK-YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG-PILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus       100 ~~~~~-~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      +..++ ++++|++|||||...      ...++.+.++++|++.+++|+.| .+++.+.+.+++++++.|      .|+++
T Consensus        81 ~~~~~~~GkidiLvnnag~~~------~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg------~I~~~  148 (270)
T KOG0725|consen   81 FAVEKFFGKIDILVNNAGALG------LTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGG------SIVNI  148 (270)
T ss_pred             HHHHHhCCCCCEEEEcCCcCC------CCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCc------eEEEE
Confidence            99998 799999999999986      34478999999999999999995 777777777777776665      99999


Q ss_pred             ecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          178 SARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       178 ss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ||..+..+.  .+....|+++|+|+++|+|++ .||
T Consensus       149 ss~~~~~~~--~~~~~~Y~~sK~al~~ltr~lA~El  182 (270)
T KOG0725|consen  149 SSVAGVGPG--PGSGVAYGVSKAALLQLTRSLAKEL  182 (270)
T ss_pred             eccccccCC--CCCcccchhHHHHHHHHHHHHHHHH
Confidence            999888763  222279999999999999999 555

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.6e-31  Score=212.22  Aligned_cols=170  Identities=20%  Similarity=0.272  Sum_probs=148.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc--CCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ++++|+++||||++|||.+++++|+++|++  |++++|+++..++..+.+..  .+.++.+++||++|+++++++++++.
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~--vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAA--VALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE   81 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999997  99999988776665554443  34578899999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||||...       ..+..+.+.++|++.+++|+.+++.++++++|+|++++.+      +||++||..+
T Consensus        82 ~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~  148 (260)
T PRK07063         82 EAFGPLDVLVNNAGINV-------FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRG------SIVNIASTHA  148 (260)
T ss_pred             HHhCCCcEEEECCCcCC-------CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCe------EEEEECChhh
Confidence            99999999999999764       3445677889999999999999999999999999876654      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+|+++|++++ .||
T Consensus       149 ~~~---~~~~~~Y~~sKaa~~~~~~~la~el  176 (260)
T PRK07063        149 FKI---IPGCFPYPVAKHGLLGLTRALGIEY  176 (260)
T ss_pred             ccC---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            777   577889999999999999999 444

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.6e-31  Score=214.24  Aligned_cols=171  Identities=15%  Similarity=0.219  Sum_probs=149.7

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++|+++||||++|||+++|++|+++|++  |++.+|+++.+++..+.+...+.++.++++|++|+++++++++++.+.
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~--Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGAR--VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999997  889999887766655555444567889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.+     +.||++||..+..
T Consensus        81 ~g~id~li~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~-----g~iv~isS~~~~~  148 (275)
T PRK05876         81 LGHVDVVFSNAGIVV-------GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTG-----GHVVFTASFAGLV  148 (275)
T ss_pred             cCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC-----CEEEEeCChhhcc
Confidence            999999999999864       4567788999999999999999999999999999876522     3999999998887


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|+++|+++.+|+++| .|+
T Consensus       149 ~---~~~~~~Y~asK~a~~~~~~~l~~e~  174 (275)
T PRK05876        149 P---NAGLGAYGVAKYGVVGLAETLAREV  174 (275)
T ss_pred             C---CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            7   578889999999999999999 444

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.5e-31  Score=215.86  Aligned_cols=178  Identities=19%  Similarity=0.195  Sum_probs=143.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC----------CcccccchhhcCCCceeEEEecCCCHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN----------GATGLLDLKNRFPERLDVLQLDLTVEST   93 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~----------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~   93 (214)
                      .++++|+++||||++|||.++|++|++.|++  |++.+|+..          .++.+.+.+...+.++.+++||++|+++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGAT--VYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            5588999999999999999999999999997  888999853          2233334444445678889999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECc-cccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCce
Q 028056           94 IEASAKSIKEKYGSLNLLINAS-GILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA  172 (214)
Q Consensus        94 v~~~~~~~~~~~~~vd~lv~na-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~  172 (214)
                      ++++++++.+.++++|++|||| |.....   ....++.+.+.++|.+.+++|+.+++.++++++|+|++++.|      
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g------  152 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLF---EWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGG------  152 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCccccccc---ccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCc------
Confidence            9999999999999999999999 742100   012456778889999999999999999999999999876544      


Q ss_pred             EEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          173 VVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       173 ~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +|||+||..+.....+.++...|+++|+|+.+|+++| .||
T Consensus       153 ~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el  193 (305)
T PRK08303        153 LVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHEL  193 (305)
T ss_pred             EEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence            9999999765432112345678999999999999999 444

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.3e-31  Score=211.11  Aligned_cols=172  Identities=20%  Similarity=0.257  Sum_probs=147.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||++|||.+++++|+++|++  |++++|+.++++.+.+.+...+.++..+.+|++|+++++++++++.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQ--VAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA   82 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999997  99999998777666665555566788999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.+.++|.+++.+     ++|+++||..+.
T Consensus        83 ~~g~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----g~iv~~sS~~~~  150 (253)
T PRK05867         83 ELGGIDIAVCNAGIIT-------VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQG-----GVIINTASMSGH  150 (253)
T ss_pred             HhCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCC-----cEEEEECcHHhc
Confidence            9999999999999764       4566788899999999999999999999999999776532     389999998775


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .... ......|+++|+|+++|+++++
T Consensus       151 ~~~~-~~~~~~Y~asKaal~~~~~~la  176 (253)
T PRK05867        151 IINV-PQQVSHYCASKAAVIHLTKAMA  176 (253)
T ss_pred             CCCC-CCCccchHHHHHHHHHHHHHHH
Confidence            4320 1245789999999999999994

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.8e-31  Score=207.61  Aligned_cols=168  Identities=10%  Similarity=0.099  Sum_probs=144.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++|+++||||++|||++++++|+++|++  |++.+|++++++++.+.+.+.+.++..++||++|+++++++++++.+
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~--V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGAT--LILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQ   78 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999997  99999998887766555555566788899999999999999999999


Q ss_pred             HcC-CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          104 KYG-SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       104 ~~~-~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      .++ ++|++|||||...      +..++.+.+.++|.+.+++|+.+++.+++.++|+|.+++.+     ++||++||..+
T Consensus        79 ~~g~~iD~li~nag~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~-----g~Iv~isS~~~  147 (227)
T PRK08862         79 QFNRAPDVLVNNWTSSP------LPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKK-----GVIVNVISHDD  147 (227)
T ss_pred             HhCCCCCEEEECCccCC------CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----ceEEEEecCCC
Confidence            998 9999999998653      24567788889999999999999999999999999875421     39999999654


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .      +++..|+++|+|+.+|+++|+
T Consensus       148 ~------~~~~~Y~asKaal~~~~~~la  169 (227)
T PRK08862        148 H------QDLTGVESSNALVSGFTHSWA  169 (227)
T ss_pred             C------CCcchhHHHHHHHHHHHHHHH
Confidence            2      446789999999999999994

>PRK08589 short chain dehydrogenase; Validated

Probab=99.97  E-value=7.9e-31  Score=212.44  Aligned_cols=167  Identities=22%  Similarity=0.300  Sum_probs=145.6

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|++|||||++|||+++|++|+++|++  |++++|+ +.++...+.+.+.+.++.+++||++++++++++++++.+.
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~--vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAY--VLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ   79 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence            368999999999999999999999999997  9999998 5555544444445667899999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...      +..++.+.+.+.|++.+++|+.+++.+++.++|+|++++ |      +||++||..+..
T Consensus        80 ~g~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g------~iv~isS~~~~~  146 (272)
T PRK08589         80 FGRVDVLFNNAGVDN------AAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-G------SIINTSSFSGQA  146 (272)
T ss_pred             cCCcCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C------EEEEeCchhhcC
Confidence            999999999999864      234566788899999999999999999999999998764 4      999999998877


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|+++|+|+++|+++++
T Consensus       147 ~---~~~~~~Y~asKaal~~l~~~la  169 (272)
T PRK08589        147 A---DLYRSGYNAAKGAVINFTKSIA  169 (272)
T ss_pred             C---CCCCchHHHHHHHHHHHHHHHH
Confidence            6   5677899999999999999994

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.97  E-value=1.2e-31  Score=199.46  Aligned_cols=172  Identities=21%  Similarity=0.287  Sum_probs=149.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      -.++.|.++||||++|||++++..|+++|++  |++.+++...++.....+..+ ++-..+.||++++.+++..+++..+
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Gar--v~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k   86 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGAR--VAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEK   86 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcE--EEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHH
Confidence            3467899999999999999999999999998  999999887766655555443 4577899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++++||||||+..       +..+...+.++|++.+.+|+.|.|+++|++...|..++..    ..+|||+||+.|.
T Consensus        87 ~~g~psvlVncAGItr-------D~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~----~~sIiNvsSIVGk  155 (256)
T KOG1200|consen   87 SLGTPSVLVNCAGITR-------DGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQ----GLSIINVSSIVGK  155 (256)
T ss_pred             hcCCCcEEEEcCcccc-------ccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCC----CceEEeehhhhcc
Confidence            9999999999999986       7888899999999999999999999999999985433211    1499999999999


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .++   -++..|+++|+++.+|+|++ +|+
T Consensus       156 iGN---~GQtnYAAsK~GvIgftktaArEl  182 (256)
T KOG1200|consen  156 IGN---FGQTNYAASKGGVIGFTKTAAREL  182 (256)
T ss_pred             ccc---ccchhhhhhcCceeeeeHHHHHHH
Confidence            994   78899999999999999998 443

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1e-30  Score=210.77  Aligned_cols=169  Identities=20%  Similarity=0.238  Sum_probs=148.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .++++|+++||||++|||.+++++|+++|++  |++++|++++++...+.+.+.  +.++.++++|++|+++++++++++
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGAS--VAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV   81 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            5688999999999999999999999999997  999999987766644444332  237888999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|++|||||...       ..++.+.+.++|.+.+++|+.+++.+++.++|.|++++.|      +||++||..
T Consensus        82 ~~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~  148 (265)
T PRK07062         82 EARFGGVDMLVNNAGQGR-------VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAA------SIVCVNSLL  148 (265)
T ss_pred             HHhcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCc------EEEEecccc
Confidence            999999999999999864       4567788899999999999999999999999999887655      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   .++...|+++|+++.+|+++++
T Consensus       149 ~~~~---~~~~~~y~asKaal~~~~~~la  174 (265)
T PRK07062        149 ALQP---EPHMVATSAARAGLLNLVKSLA  174 (265)
T ss_pred             ccCC---CCCchHhHHHHHHHHHHHHHHH
Confidence            8776   5778899999999999999983

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.97  E-value=2.5e-31  Score=202.31  Aligned_cols=167  Identities=26%  Similarity=0.359  Sum_probs=143.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC-CceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      |++.||.+++|||.||||++++++|+++|..  +.+...+.++.+...++-+..+ .++.|++||+++..++++.++++.
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik--~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~   78 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIK--VLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKIL   78 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCch--heeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHH
Confidence            5688999999999999999999999999998  5555555656554444433333 489999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ..++.+|++||+||+..               ..+|++.+.+|+.|.+.-++.++|+|.+...|   ..|.|||+||+.|
T Consensus        79 ~~fg~iDIlINgAGi~~---------------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG---~GGiIvNmsSv~G  140 (261)
T KOG4169|consen   79 ATFGTIDILINGAGILD---------------DKDWERTINVNLTGVINGTQLALPYMDKKQGG---KGGIIVNMSSVAG  140 (261)
T ss_pred             HHhCceEEEEccccccc---------------chhHHHhhccchhhhhhhhhhhhhhhhhhcCC---CCcEEEEeccccc
Confidence            99999999999999862               35699999999999999999999999876543   3369999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhcccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAMDFE  213 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~~~  213 (214)
                      +.|   .+-...|++||+++..|||||++..
T Consensus       141 L~P---~p~~pVY~AsKaGVvgFTRSla~~a  168 (261)
T KOG4169|consen  141 LDP---MPVFPVYAASKAGVVGFTRSLADLA  168 (261)
T ss_pred             cCc---cccchhhhhcccceeeeehhhhhhh
Confidence            998   7889999999999999999998753

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.8e-30  Score=209.14  Aligned_cols=172  Identities=16%  Similarity=0.182  Sum_probs=139.5

Q ss_pred             ccccCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~--giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      -.+++|+++||||++  |||+++|++|+++|++  |++.+|+....+.+.++..+.+. ..+++||++|+++++++++++
T Consensus         4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~--v~~~~r~~~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~   80 (260)
T PRK06603          4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAE--LWFTYQSEVLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDI   80 (260)
T ss_pred             cccCCcEEEEECCCCCcchHHHHHHHHHHcCCE--EEEEeCchHHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHH
Confidence            457899999999997  9999999999999997  88888874221223333333233 346789999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++++|++|||+|.....   ....++.+.+.++|++.+++|+.+++.+++.+.|+|++.  |      +|||+||..
T Consensus        81 ~~~~g~iDilVnnag~~~~~---~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~--G------~Iv~isS~~  149 (260)
T PRK06603         81 KEKWGSFDFLLHGMAFADKN---ELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDG--G------SIVTLTYYG  149 (260)
T ss_pred             HHHcCCccEEEEccccCCcc---cccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccC--c------eEEEEecCc
Confidence            99999999999999975310   012456788999999999999999999999999999642  3      999999988


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .+++..|+++|+|+.+|+++| .||
T Consensus       150 ~~~~---~~~~~~Y~asKaal~~l~~~la~el  178 (260)
T PRK06603        150 AEKV---IPNYNVMGVAKAALEASVKYLANDM  178 (260)
T ss_pred             cccC---CCcccchhhHHHHHHHHHHHHHHHh
Confidence            8766   577889999999999999999 444

>PRK06398 aldose dehydrogenase; Validated

Probab=99.97  E-value=4.2e-30  Score=206.70  Aligned_cols=159  Identities=24%  Similarity=0.321  Sum_probs=142.0

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|++|||||++|||+++|++|+++|++  |++.+|+....           .++.+++||++|+++++++++++.+.
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~--Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSN--VINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  88889876431           25778999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||..+..
T Consensus        70 ~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~~~~  136 (258)
T PRK06398         70 YGRIDILVNNAGIES-------YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKG------VIINIASVQSFA  136 (258)
T ss_pred             cCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe------EEEEeCcchhcc
Confidence            999999999999864       4667788999999999999999999999999999876654      999999998877


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .+++..|+++|++++++++++ .|+
T Consensus       137 ~---~~~~~~Y~~sKaal~~~~~~la~e~  162 (258)
T PRK06398        137 V---TRNAAAYVTSKHAVLGLTRSIAVDY  162 (258)
T ss_pred             C---CCCCchhhhhHHHHHHHHHHHHHHh
Confidence            6   578899999999999999999 444

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.2e-30  Score=206.09  Aligned_cols=172  Identities=21%  Similarity=0.248  Sum_probs=147.2

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .+++++|+++||||++|||.++|++|+++|++  |++.+|+.+. ++...+.+...+.++.++++|++|+++++++++++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   80 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGAD--VALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVART   80 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999997  8888887643 34444444445667889999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.+++.|++++.+      +||++||..
T Consensus        81 ~~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~  147 (254)
T PRK06114         81 EAELGALTLAVNAAGIAN-------ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGG------SIVNIASMS  147 (254)
T ss_pred             HHHcCCCCEEEECCCCCC-------CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCc------EEEEECchh
Confidence            999999999999999864       4567788999999999999999999999999999877655      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+.. ...+..|+++|+|+++++++++
T Consensus       148 ~~~~~~-~~~~~~Y~~sKaa~~~l~~~la  175 (254)
T PRK06114        148 GIIVNR-GLLQAHYNASKAGVIHLSKSLA  175 (254)
T ss_pred             hcCCCC-CCCcchHHHHHHHHHHHHHHHH
Confidence            876631 1236799999999999999994

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=4.1e-30  Score=207.31  Aligned_cols=171  Identities=15%  Similarity=0.179  Sum_probs=137.4

Q ss_pred             ccCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~--giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++|+++||||++  |||+++|++|+++|++  |++.+|+. +.+...+.+........+++||++|+++++++++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~--vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAE--LAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCE--EEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHh
Confidence            6899999999986  9999999999999997  88888873 33232222222234567889999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||......  ....++.+.+.++|++.+++|+.+++.+++.+.|.+.++  |      +||++||..+.
T Consensus        81 ~~g~iD~linnAg~~~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--g------~Iv~iss~~~~  150 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQ--LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--S------ALLTLSYLGAE  150 (262)
T ss_pred             hcCCCCEEEECCccCCccc--cCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC--c------EEEEEecCCCC
Confidence            9999999999999753100  001225678889999999999999999999998866432  3      99999998877


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .+++..|++||+|+++|++++ .||
T Consensus       151 ~~---~~~~~~Y~asKaal~~l~~~la~el  177 (262)
T PRK07984        151 RA---IPNYNVMGLAKASLEANVRYMANAM  177 (262)
T ss_pred             CC---CCCcchhHHHHHHHHHHHHHHHHHh
Confidence            65   678889999999999999999 554

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-30  Score=215.71  Aligned_cols=171  Identities=16%  Similarity=0.183  Sum_probs=152.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++||||++|||++++++|+++|++  |++++|++++++++.+.+...+.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~--Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~   81 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAK--VVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEE   81 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4578899999999999999999999999997  99999998777666666666677899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||...       ..++.+.+.+++++.+++|+.+.+.+++.++++|++++.|      .||++||..+.
T Consensus        82 ~~g~iD~lInnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g------~iV~isS~~~~  148 (334)
T PRK07109         82 ELGPIDTWVNNAMVTV-------FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRG------AIIQVGSALAY  148 (334)
T ss_pred             HCCCCCEEEECCCcCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEeCChhhc
Confidence            9999999999999764       4567888999999999999999999999999999887655      99999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .+....|+++|+++++|++++ .|+
T Consensus       149 ~~---~~~~~~Y~asK~a~~~~~~~l~~el  175 (334)
T PRK07109        149 RS---IPLQSAYCAAKHAIRGFTDSLRCEL  175 (334)
T ss_pred             cC---CCcchHHHHHHHHHHHHHHHHHHHH
Confidence            77   577889999999999999999 444

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.5e-30  Score=212.00  Aligned_cols=168  Identities=23%  Similarity=0.325  Sum_probs=146.8

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ..++++|+++||||++|||.++|++|+++|++  |++++|+.++++.+.+.+.. +.++..++||++|.++++++++++.
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAK--LALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAV   80 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999997  99999988766554444432 3466777899999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.+.|+|.+.+ |      .||++||..+
T Consensus        81 ~~~g~id~vI~nAG~~~-------~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~-g------~iv~isS~~~  146 (296)
T PRK05872         81 ERFGGIDVVVANAGIAS-------GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERR-G------YVLQVSSLAA  146 (296)
T ss_pred             HHcCCCCEEEECCCcCC-------CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C------EEEEEeCHhh
Confidence            99999999999999864       56678889999999999999999999999999987643 3      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .+++..|+++|+++++|+++++
T Consensus       147 ~~~---~~~~~~Y~asKaal~~~~~~l~  171 (296)
T PRK05872        147 FAA---APGMAAYCASKAGVEAFANALR  171 (296)
T ss_pred             cCC---CCCchHHHHHHHHHHHHHHHHH
Confidence            877   5788999999999999999984

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.97  E-value=5.1e-30  Score=208.10  Aligned_cols=180  Identities=21%  Similarity=0.292  Sum_probs=151.9

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++++|+++||||++|||++++++|+++|++  |++.+|+.+..+.+.+.+...+.++.+++||++|++++.++++++
T Consensus         4 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (278)
T PRK08277          4 NLFSLKGKVAVITGGGGVLGGAMAKELARAGAK--VAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQI   81 (278)
T ss_pred             ceeccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999997  999999877665555555445667889999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCC--------CCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceE
Q 028056          102 KEKYGSLNLLINASGILSIPNV--------LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV  173 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~  173 (214)
                      .+.++++|++|||||...+...        ..+..++.+.+.++|++.+++|+.+++.+++.+++.|++.+.+      +
T Consensus        82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~  155 (278)
T PRK08277         82 LEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGG------N  155 (278)
T ss_pred             HHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------E
Confidence            9999999999999997532111        1112456788899999999999999999999999999877655      9


Q ss_pred             EEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          174 VANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       174 iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ||++||..+..+   .++...|+++|+|++++++++ .+|
T Consensus       156 ii~isS~~~~~~---~~~~~~Y~~sK~a~~~l~~~la~e~  192 (278)
T PRK08277        156 IINISSMNAFTP---LTKVPAYSAAKAAISNFTQWLAVHF  192 (278)
T ss_pred             EEEEccchhcCC---CCCCchhHHHHHHHHHHHHHHHHHh
Confidence            999999988877   577889999999999999999 444

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.97  E-value=5.3e-30  Score=205.90  Aligned_cols=169  Identities=19%  Similarity=0.284  Sum_probs=148.0

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|++|||||++|||.+++++|+++|++  |++.+|+ ...+.+.+.+...+.++.+++||++++++++++++++.
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~--v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   86 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGAD--IIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEAL   86 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999997  8888887 44455555555556678999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+.++|++++.+      +||++||..+
T Consensus        87 ~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~  153 (258)
T PRK06935         87 EEFGKIDILVNNAGTIR-------RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSG------KIINIASMLS  153 (258)
T ss_pred             HHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCe------EEEEECCHHh
Confidence            99999999999999764       3566778889999999999999999999999999887665      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .+.+..|+++|+++++++++++
T Consensus       154 ~~~---~~~~~~Y~asK~a~~~~~~~la  178 (258)
T PRK06935        154 FQG---GKFVPAYTASKHGVAGLTKAFA  178 (258)
T ss_pred             ccC---CCCchhhHHHHHHHHHHHHHHH
Confidence            776   5677899999999999999994

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.97  E-value=4e-30  Score=210.56  Aligned_cols=172  Identities=18%  Similarity=0.275  Sum_probs=139.3

Q ss_pred             ccccccCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc---------C-C---CceeEEEe
Q 028056           22 ASVKWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR---------F-P---ERLDVLQL   86 (214)
Q Consensus        22 ~~~~l~~k~vlItG~--s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~---------~-~---~~~~~~~~   86 (214)
                      +.++++||++|||||  ++|||.++|+.|+++|++  |++ +|+.++++.....+.+         . +   .....+.+
T Consensus         3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~--Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (303)
T PLN02730          3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAE--ILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPL   79 (303)
T ss_pred             CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCE--EEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeec
Confidence            346799999999999  899999999999999997  777 6776666554322221         0 1   12467888


Q ss_pred             cC--CC------------------HHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeec
Q 028056           87 DL--TV------------------ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA  146 (214)
Q Consensus        87 Dl--~~------------------~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~  146 (214)
                      |+  ++                  +++++++++++.+.++++|+||||||....     ...++.+.+.++|++.+++|+
T Consensus        80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~-----~~~~~~~~~~e~~~~~~~vN~  154 (303)
T PLN02730         80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPE-----VTKPLLETSRKGYLAAISASS  154 (303)
T ss_pred             ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCcccc-----CCCChhhCCHHHHHHHHHHHh
Confidence            98  33                  448999999999999999999999985420     135678899999999999999


Q ss_pred             hhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCc-chhhhhHHHHHHHHHHh-ccc
Q 028056          147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW-HSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       147 ~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~-~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+++.++|.++|.|+++  |      +|||+||..+..+   .+++ ..|+++|+|+++|+++| .||
T Consensus       155 ~~~~~l~~~~~p~m~~~--G------~II~isS~a~~~~---~p~~~~~Y~asKaAl~~l~~~la~El  211 (303)
T PLN02730        155 YSFVSLLQHFGPIMNPG--G------ASISLTYIASERI---IPGYGGGMSSAKAALESDTRVLAFEA  211 (303)
T ss_pred             HHHHHHHHHHHHHHhcC--C------EEEEEechhhcCC---CCCCchhhHHHHHHHHHHHHHHHHHh
Confidence            99999999999999764  4      9999999988776   4544 58999999999999999 555

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=3.9e-30  Score=208.49  Aligned_cols=172  Identities=17%  Similarity=0.221  Sum_probs=140.1

Q ss_pred             ccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++|+++||||+  +|||.++|++|+++|++  |++.+|+....+.++++..+.+ ....+++|++|+++++++++++
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~--V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~   82 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAE--LAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETL   82 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCE--EEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHH
Confidence            44688999999997  89999999999999997  8888876432233333333333 3567899999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++++|++|||||+.....   ...++.+.+.++|++.+++|+.+++.+++.+.|+|++.  |      +||++||..
T Consensus        83 ~~~~g~iD~lv~nAG~~~~~~---~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g------~Iv~iss~~  151 (272)
T PRK08159         83 EKKWGKLDFVVHAIGFSDKDE---LTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDG--G------SILTLTYYG  151 (272)
T ss_pred             HHhcCCCcEEEECCcccCccc---cccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--c------eEEEEeccc
Confidence            999999999999999763100   02456788899999999999999999999999998642  3      999999987


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .+++..|+++|+|+.+|+++| .||
T Consensus       152 ~~~~---~p~~~~Y~asKaal~~l~~~la~el  180 (272)
T PRK08159        152 AEKV---MPHYNVMGVAKAALEASVKYLAVDL  180 (272)
T ss_pred             cccC---CCcchhhhhHHHHHHHHHHHHHHHh
Confidence            7665   678899999999999999999 444

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=5.2e-30  Score=206.55  Aligned_cols=172  Identities=15%  Similarity=0.200  Sum_probs=138.1

Q ss_pred             ccCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~--s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++|+++||||  ++|||+++|++|+++|++  |++.+|+....+.+.++..+. .....++||++|+++++++++++.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAE--LAFTYVVDKLEERVRKMAAEL-DSELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCE--EEEEcCcHHHHHHHHHHHhcc-CCceEEECCCCCHHHHHHHHHHHHH
Confidence            78999999997  679999999999999998  888777643222233333332 3356789999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +++++|++|||||.......  ....+.+.+.++|++.+++|+.+++++++.+.|.|++++ |      .||++||..+.
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~--~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g------~Iv~iss~~~~  151 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEAL--SGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-S------AIVALSYLGAV  151 (261)
T ss_pred             HhCCCcEEEECCccCCcccc--ccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-c------EEEEEcccccc
Confidence            99999999999998641000  011245678889999999999999999999999987543 3      89999999887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .+++..|+++|+|+.+|++++ .|+
T Consensus       152 ~~---~~~~~~Y~asKaal~~l~~~la~e~  178 (261)
T PRK08690        152 RA---IPNYNVMGMAKASLEAGIRFTAACL  178 (261)
T ss_pred             cC---CCCcccchhHHHHHHHHHHHHHHHh
Confidence            76   578899999999999999999 444

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.97  E-value=1e-29  Score=203.73  Aligned_cols=169  Identities=18%  Similarity=0.244  Sum_probs=143.6

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|+++||||++|||.++|++|+++|++  |++.+++..  ++..+.+.+.+.++..+++|++|+++++++++++.
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~--vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   80 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCD--IVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAV   80 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  777776542  22333333345578899999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++++.++|++++.+     ++||++||..+
T Consensus        81 ~~~~~~D~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-----g~iv~isS~~~  148 (253)
T PRK08993         81 AEFGHIDILVNNAGLIR-------REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNG-----GKIINIASMLS  148 (253)
T ss_pred             HHhCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC-----eEEEEECchhh
Confidence            99999999999999764       4556788899999999999999999999999999776432     49999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .+....|+++|+|+++++++++
T Consensus       149 ~~~---~~~~~~Y~~sKaa~~~~~~~la  173 (253)
T PRK08993        149 FQG---GIRVPSYTASKSGVMGVTRLMA  173 (253)
T ss_pred             ccC---CCCCcchHHHHHHHHHHHHHHH
Confidence            776   5677899999999999999994

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=7.9e-30  Score=205.71  Aligned_cols=171  Identities=20%  Similarity=0.311  Sum_probs=151.5

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++++|+++||||+++||.+++++|+++|++  |++.+|+++++++..+.....+.++.+++||++|+++++++++++
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~--vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGAT--IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQI   81 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            457789999999999999999999999999997  888899887766655555555668999999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|++|||||...       ..++.+.+.+++++.+++|+.+++.+++.++++|++++.+      +||++||..
T Consensus        82 ~~~~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~  148 (265)
T PRK07097         82 EKEVGVIDILVNNAGIIK-------RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHG------KIINICSMM  148 (265)
T ss_pred             HHhCCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCc------EEEEEcCcc
Confidence            999999999999999864       4566788899999999999999999999999999876655      999999988


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   .+++..|+++|+++++++++++
T Consensus       149 ~~~~---~~~~~~Y~~sKaal~~l~~~la  174 (265)
T PRK07097        149 SELG---RETVSAYAAAKGGLKMLTKNIA  174 (265)
T ss_pred             ccCC---CCCCccHHHHHHHHHHHHHHHH
Confidence            8776   5778899999999999999994

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=7e-30  Score=204.66  Aligned_cols=171  Identities=19%  Similarity=0.269  Sum_probs=149.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|++|||||++|||.+++++|+++|++  |++.+|++++++...+.+...+.++.++.+|++|+++++++++++.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~--vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAE--IIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK   82 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999997  99999988766655555544456788899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+.+++.+++.+      +||++||..+.
T Consensus        83 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~~  149 (254)
T PRK08085         83 DIGPIDVLINNAGIQR-------RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAG------KIINICSMQSE  149 (254)
T ss_pred             hcCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEccchhc
Confidence            9999999999999764       4567788899999999999999999999999999876555      99999998877


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|++++++++++ .++
T Consensus       150 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~  176 (254)
T PRK08085        150 LG---RDTITPYAASKGAVKMLTRGMCVEL  176 (254)
T ss_pred             cC---CCCCcchHHHHHHHHHHHHHHHHHH
Confidence            76   567789999999999999999 443

>PLN02253 xanthoxin dehydrogenase

Probab=99.97  E-value=1e-29  Score=206.50  Aligned_cols=176  Identities=23%  Similarity=0.334  Sum_probs=147.6

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ..+..++++|+++||||++|||.+++++|+++|++  |++.+|+.+..+...+.+. .+.++.++++|++|+++++++++
T Consensus        10 ~~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~--v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   86 (280)
T PLN02253         10 SLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAK--VCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVD   86 (280)
T ss_pred             cccccccCCCEEEEECCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHH
Confidence            34446788999999999999999999999999997  8889987765444333332 23578899999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||....     +..++.+.+.+++++.+++|+.+++.+++++.++|.+.+.|      +|++++|
T Consensus        87 ~~~~~~g~id~li~~Ag~~~~-----~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~ii~isS  155 (280)
T PLN02253         87 FTVDKFGTLDIMVNNAGLTGP-----PCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKG------SIVSLCS  155 (280)
T ss_pred             HHHHHhCCCCEEEECCCcCCC-----CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc------eEEEecC
Confidence            999999999999999997641     12456788899999999999999999999999999876555      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+   .++...|+++|++++++++++ .|+
T Consensus       156 ~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~  186 (280)
T PLN02253        156 VASAIG---GLGPHAYTGSKHAVLGLTRSVAAEL  186 (280)
T ss_pred             hhhccc---CCCCcccHHHHHHHHHHHHHHHHHh
Confidence            988776   466779999999999999998 444

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=204.35  Aligned_cols=177  Identities=17%  Similarity=0.233  Sum_probs=145.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCcccccchhh-cCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r-~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .++++|+++||||++|||+++|++|+++|++  |++.+| +++.++...+.+. ..+.++.++++|++|+++++++++++
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVN--IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            5688999999999999999999999999997  777665 4444444333332 23557899999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|++|||||....+ ......++.+.+.+++.+.+++|+.+.+.+++.++|.|++.+.+      +||++||..
T Consensus        82 ~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~  154 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRA-VVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGG------SIISLSSTG  154 (260)
T ss_pred             HHhcCCccEEEECccccccc-cccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCE------EEEEEeccc
Confidence            99999999999999875311 00012456788889999999999999999999999999876654      999999988


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .+++..|+++|+++++|+++| .||
T Consensus       155 ~~~~---~~~~~~Y~asK~a~~~~~~~la~el  183 (260)
T PRK08416        155 NLVY---IENYAGHGTSKAAVETMVKYAATEL  183 (260)
T ss_pred             cccC---CCCcccchhhHHHHHHHHHHHHHHh
Confidence            7666   577889999999999999999 544

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=203.16  Aligned_cols=168  Identities=18%  Similarity=0.213  Sum_probs=145.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|+++||||++|||.+++++|+++|++  |++++|+.+.++.+.+.+.+.+.++.++++|++|+++++++++++.+.+++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGAN--VVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999997  999999987666555555444567889999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||+|...       ..++.+.+.++|++.+++|+.+++.++++++++|.+.+..     ++||++||..+..+  
T Consensus        79 id~lI~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----g~ii~isS~~~~~~--  144 (252)
T PRK07677         79 IDALINNAAGNF-------ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIK-----GNIINMVATYAWDA--  144 (252)
T ss_pred             ccEEEECCCCCC-------CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCC-----EEEEEEcChhhccC--
Confidence            999999998653       3566788999999999999999999999999998764321     49999999988766  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          188 RLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                       .++...|+++|+++++|+++| .||
T Consensus       145 -~~~~~~Y~~sKaa~~~~~~~la~e~  169 (252)
T PRK07677        145 -GPGVIHSAAAKAGVLAMTRTLAVEW  169 (252)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHh
Confidence             467789999999999999998 444

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1e-29  Score=203.36  Aligned_cols=170  Identities=24%  Similarity=0.283  Sum_probs=149.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||++|||.+++++|+++|++  |++++|+.+.++.+.+.+.+.+.++.++++|+++.++++++++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAH--VIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRE   81 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999997  99999988766665555555566788899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||...      ...++.+.+.+++++.+++|+.+++.+++.++|++++++.+      +|+++||..+.
T Consensus        82 ~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~  149 (252)
T PRK07035         82 RHGRLDILVNNAAANP------YFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGG------SIVNVASVNGV  149 (252)
T ss_pred             HcCCCCEEEECCCcCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCc------EEEEECchhhc
Confidence            9999999999999753      13456678889999999999999999999999999876655      99999998887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .+++..|++||+++++++++++
T Consensus       150 ~~---~~~~~~Y~~sK~al~~~~~~l~  173 (252)
T PRK07035        150 SP---GDFQGIYSITKAAVISMTKAFA  173 (252)
T ss_pred             CC---CCCCcchHHHHHHHHHHHHHHH
Confidence            76   5778899999999999999994

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-29  Score=204.63  Aligned_cols=173  Identities=18%  Similarity=0.271  Sum_probs=145.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc-------ccccchhhcCCCceeEEEecCCCHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-------TGLLDLKNRFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      +++++|+++||||++|||.++|++|+++|++  |++++|+.+..       +...+.+...+.++.++++|+++++++.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGAN--IVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence            5678999999999999999999999999997  88889876532       22233344456678999999999999999


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      +++++.+.++++|++|||||...       ..+..+.+.+++++.+++|+.+++.+++.+.|+|++++.+      .|++
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g------~iv~  146 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAIN-------LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENP------HILT  146 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcC-------CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCC------EEEE
Confidence            99999999999999999999764       3456778889999999999999999999999999877655      9999


Q ss_pred             eecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          177 LSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       177 iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ++|..+..+. ..+++..|+++|++++++++++ .|+
T Consensus       147 iss~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~el  182 (273)
T PRK08278        147 LSPPLNLDPK-WFAPHTAYTMAKYGMSLCTLGLAEEF  182 (273)
T ss_pred             ECCchhcccc-ccCCcchhHHHHHHHHHHHHHHHHHh
Confidence            9998766551 1267889999999999999999 454

>PRK06194 hypothetical protein; Provisional

Probab=99.97  E-value=1.4e-29  Score=206.41  Aligned_cols=176  Identities=19%  Similarity=0.230  Sum_probs=149.0

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|++|||||++|||+++|++|+++|++  |++++|+.+.+++..+.+...+.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMK--LVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999997  999999877666554444444557888999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|.|++++.......++||++||..+..
T Consensus        81 ~g~id~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  153 (287)
T PRK06194         81 FGAVHLLFNNAGVGA-------GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL  153 (287)
T ss_pred             cCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc
Confidence            999999999999865       4556778889999999999999999999999999876541111224999999998887


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|+++|++++++++++ .++
T Consensus       154 ~---~~~~~~Y~~sK~a~~~~~~~l~~e~  179 (287)
T PRK06194        154 A---PPAMGIYNVSKHAVVSLTETLYQDL  179 (287)
T ss_pred             C---CCCCcchHHHHHHHHHHHHHHHHHH
Confidence            7   577789999999999999998 444

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-29  Score=202.81  Aligned_cols=170  Identities=24%  Similarity=0.299  Sum_probs=150.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +.+++|+++||||+++||.+++++|+++|++  |++.+|+++..+...+.+.+.+.++.++.+|++|.+++.++++++.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAK--VVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999997  99999998776665555555567899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||+|...      +..++.+.+.+++++.+++|+.+++.+++.++|+|.+++.+      .+|++||..+.
T Consensus        81 ~~g~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~ii~~sS~~~~  148 (253)
T PRK06172         81 AYGRLDYAFNNAGIEI------EQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGG------AIVNTASVAGL  148 (253)
T ss_pred             HhCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEECchhhc
Confidence            9999999999999764      23456788899999999999999999999999999876655      99999999888


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .+++..|+++|+++++|+++++
T Consensus       149 ~~---~~~~~~Y~~sKaa~~~~~~~la  172 (253)
T PRK06172        149 GA---APKMSIYAASKHAVIGLTKSAA  172 (253)
T ss_pred             cC---CCCCchhHHHHHHHHHHHHHHH
Confidence            77   5788999999999999999994

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=203.72  Aligned_cols=170  Identities=20%  Similarity=0.301  Sum_probs=149.7

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|+++||||+++||.++|++|+++|++  |++.+|++++.+...+.+...+.++.++++|++|+++++++++++.
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAE--VILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFE   82 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999997  9999998876655555555445678899999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+.++|.+++.+      +||++||..+
T Consensus        83 ~~~~~~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~iss~~~  149 (255)
T PRK07523         83 AEIGPIDILVNNAGMQF-------RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAG------KIINIASVQS  149 (255)
T ss_pred             HhcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCe------EEEEEccchh
Confidence            99999999999999764       4567788999999999999999999999999999876655      9999999887


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .+++..|+++|++++.++++++
T Consensus       150 ~~~---~~~~~~y~~sK~a~~~~~~~~a  174 (255)
T PRK07523        150 ALA---RPGIAPYTATKGAVGNLTKGMA  174 (255)
T ss_pred             ccC---CCCCccHHHHHHHHHHHHHHHH
Confidence            766   5778899999999999999984

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.2e-29  Score=204.37  Aligned_cols=172  Identities=16%  Similarity=0.195  Sum_probs=135.7

Q ss_pred             cccCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~--s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++|+++||||  ++|||.++|++|+++|++  |++.+|.....+.+.++..+.+ ....++||++|+++++++++++.
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~   79 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAE--LAFTYVGDRFKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLG   79 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCe--EEEEccchHHHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHH
Confidence            367899999996  679999999999999998  8777654222222333333223 24578999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|++|||||.......  ....+.+.+.++|++.+++|+.++++++++++|+|.+.  |      +|||+||..+
T Consensus        80 ~~~g~iD~lvnnAG~~~~~~~--~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~--g------~Ii~iss~~~  149 (260)
T PRK06997         80 QHWDGLDGLVHSIGFAPREAI--AGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDD--A------SLLTLSYLGA  149 (260)
T ss_pred             HHhCCCcEEEEccccCCcccc--ccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCC--c------eEEEEecccc
Confidence            999999999999997531000  01124567889999999999999999999999999532  3      9999999888


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .+++..|+++|+|+.+|+++| .||
T Consensus       150 ~~~---~~~~~~Y~asKaal~~l~~~la~el  177 (260)
T PRK06997        150 ERV---VPNYNTMGLAKASLEASVRYLAVSL  177 (260)
T ss_pred             ccC---CCCcchHHHHHHHHHHHHHHHHHHh
Confidence            766   577889999999999999999 454

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=205.48  Aligned_cols=165  Identities=24%  Similarity=0.276  Sum_probs=145.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++++++|||||+|||.+++++|+++|++  |++.+|+++.++.+.+.+    .++.++.||++|+++++++++++.+
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   74 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGAR--VAIGDLDEALAKETAAEL----GLVVGGPLDVTDPASFAAFLDAVEA   74 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHh----ccceEEEccCCCHHHHHHHHHHHHH
Confidence            4578899999999999999999999999997  999999876654433322    1577899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||...       ..++.+.+.+++++.+++|+.+++.+++.++|.|.+++.+      .||++||..+.
T Consensus        75 ~~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  141 (273)
T PRK07825         75 DLGPIDVLVNNAGVMP-------VGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRG------HVVNVASLAGK  141 (273)
T ss_pred             HcCCCCEEEECCCcCC-------CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC------EEEEEcCcccc
Confidence            9999999999999874       4566778889999999999999999999999999988766      99999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++|+++++
T Consensus       142 ~~---~~~~~~Y~asKaa~~~~~~~l~  165 (273)
T PRK07825        142 IP---VPGMATYCASKHAVVGFTDAAR  165 (273)
T ss_pred             CC---CCCCcchHHHHHHHHHHHHHHH
Confidence            77   5788999999999999999984

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2e-29  Score=207.62  Aligned_cols=179  Identities=19%  Similarity=0.258  Sum_probs=147.7

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCcccccchhhcCCCceeEEEecCCCHHHHHHH
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      +..+..++++|+++||||++|||.++|++|+++|++  |++.+++. +..+...+.+...+.++.++++|++|+++++++
T Consensus         3 ~~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~--Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~   80 (306)
T PRK07792          3 RTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGAT--VVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADEL   80 (306)
T ss_pred             cccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            344567899999999999999999999999999997  88887754 334444444555567889999999999999999


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCC-CCCceEEEE
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI-ERDVAVVAN  176 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-~~~~~~iv~  176 (214)
                      ++++.+ ++++|+||||||...       ...+.+.+.++|++.+++|+.+++.+++.+.++|+++.... ....++||+
T Consensus        81 ~~~~~~-~g~iD~li~nAG~~~-------~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~  152 (306)
T PRK07792         81 VATAVG-LGGLDIVVNNAGITR-------DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVN  152 (306)
T ss_pred             HHHHHH-hCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEE
Confidence            999998 999999999999875       44567788899999999999999999999999987542110 001149999


Q ss_pred             eecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          177 LSARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       177 iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +||..+..+   .++...|+++|+++++|+++++
T Consensus       153 isS~~~~~~---~~~~~~Y~asKaal~~l~~~la  183 (306)
T PRK07792        153 TSSEAGLVG---PVGQANYGAAKAGITALTLSAA  183 (306)
T ss_pred             ECCcccccC---CCCCchHHHHHHHHHHHHHHHH
Confidence            999988776   5677899999999999999984

>PRK06128 oxidoreductase; Provisional

Probab=99.97  E-value=2e-29  Score=207.04  Aligned_cols=167  Identities=18%  Similarity=0.217  Sum_probs=143.4

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC--cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++|++|||||++|||+++|++|+++|++  |++..++.+.  .+...+.+...+.++.+++||++|.++++++++++.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~--V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGAD--IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCE--EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            478899999999999999999999999997  7777765432  233444455556678899999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...      ...++.+.+.++|++.+++|+.+++++++.++|+|.+.        ++||++||..+
T Consensus       130 ~~~g~iD~lV~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------~~iv~~sS~~~  195 (300)
T PRK06128        130 KELGGLDILVNIAGKQT------AVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG--------ASIINTGSIQS  195 (300)
T ss_pred             HHhCCCCEEEECCcccC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC--------CEEEEECCccc
Confidence            99999999999999753      24567788999999999999999999999999998653        29999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .+++..|+++|+++++|+++|+
T Consensus       196 ~~~---~~~~~~Y~asK~a~~~~~~~la  220 (300)
T PRK06128        196 YQP---SPTLLDYASTKAAIVAFTKALA  220 (300)
T ss_pred             cCC---CCCchhHHHHHHHHHHHHHHHH
Confidence            776   5778899999999999999994

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.96  E-value=4.3e-29  Score=201.11  Aligned_cols=168  Identities=20%  Similarity=0.289  Sum_probs=138.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++|+++||||++|||.+++++|+++|++  |++.+|+.+.++++.   ...+.++.++++|++|.+++.++++++.+
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~l~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGAR--VAVLDKSAAGLQELE---AAHGDAVVGVEGDVRSLDDHKEAVARCVA   75 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH---hhcCCceEEEEeccCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  889999876544332   22345788999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhcc----HhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVE----KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      .++++|++|||||...      ...++.+.+    .++|++.+++|+.+++.+++++.|+|.+.+ |      ++|+++|
T Consensus        76 ~~g~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g------~iv~~sS  142 (262)
T TIGR03325        76 AFGKIDCLIPNAGIWD------YSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-G------SVIFTIS  142 (262)
T ss_pred             HhCCCCEEEECCCCCc------cCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-C------CEEEEec
Confidence            9999999999999753      112222222    357999999999999999999999997653 3      8999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+   .++...|+++|+|+++|++++ .+|
T Consensus       143 ~~~~~~---~~~~~~Y~~sKaa~~~l~~~la~e~  173 (262)
T TIGR03325       143 NAGFYP---NGGGPLYTAAKHAVVGLVKELAFEL  173 (262)
T ss_pred             cceecC---CCCCchhHHHHHHHHHHHHHHHHhh
Confidence            888776   467789999999999999999 444

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK09242 tropinone reductase; Provisional

Probab=99.96  E-value=3e-29  Score=201.36  Aligned_cols=169  Identities=21%  Similarity=0.275  Sum_probs=148.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +++++|+++||||++|||.+++++|+++|++  |++++|+.+..++..+.+...  +.++.++.||++++++++++++++
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGAD--VLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            5688999999999999999999999999997  999999887666554444333  457889999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|++|||+|...       ..+..+.+.+++++.+++|+.+++.+++++.|+|++++.+      +||++||..
T Consensus        83 ~~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~ii~~sS~~  149 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNI-------RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASS------AIVNIGSVS  149 (257)
T ss_pred             HHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------eEEEECccc
Confidence            999999999999999753       4566788999999999999999999999999999877655      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   .++...|+++|++++.++++++
T Consensus       150 ~~~~---~~~~~~Y~~sK~a~~~~~~~la  175 (257)
T PRK09242        150 GLTH---VRSGAPYGMTKAALLQMTRNLA  175 (257)
T ss_pred             cCCC---CCCCcchHHHHHHHHHHHHHHH
Confidence            8776   5778899999999999999984

>PRK07985 oxidoreductase; Provisional

Probab=99.96  E-value=3e-29  Score=205.44  Aligned_cols=167  Identities=17%  Similarity=0.188  Sum_probs=142.9

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC--CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ++++|+++||||++|||.++|++|+++|++  |++.+|+..  ..+++.+...+.+.++.++.+|++|++++.++++++.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~--Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~  123 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGAD--VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAH  123 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCE--EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999997  877776543  3334444444456678899999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||||...      +..++.+.+.++|++.+++|+.+++.+++++.|+|++.  +      +||++||..+
T Consensus       124 ~~~g~id~lv~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--g------~iv~iSS~~~  189 (294)
T PRK07985        124 KALGGLDIMALVAGKQV------AIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG--A------SIITTSSIQA  189 (294)
T ss_pred             HHhCCCCEEEECCCCCc------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC--C------EEEEECCchh
Confidence            99999999999999753      23567788899999999999999999999999998653  3      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|+|+++++++++
T Consensus       190 ~~~---~~~~~~Y~asKaal~~l~~~la  214 (294)
T PRK07985        190 YQP---SPHLLDYAATKAAILNYSRGLA  214 (294)
T ss_pred             ccC---CCCcchhHHHHHHHHHHHHHHH
Confidence            776   5778899999999999999994

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.1e-29  Score=208.09  Aligned_cols=175  Identities=23%  Similarity=0.367  Sum_probs=144.4

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-C-CCceeEEEecCCCHHHHHH
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-F-PERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~v~~   96 (214)
                      |.....++++|+++||||++|||.++|++|+++|++  |++.+|+.++.++..+.+.+ . +.++.+++||++|.+++++
T Consensus         5 ~~~~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~--Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~   82 (313)
T PRK05854          5 LDITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAE--VILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAA   82 (313)
T ss_pred             ccccCcccCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHH
Confidence            334446789999999999999999999999999997  99999998776654443332 2 2368899999999999999


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      +++++.+.++++|+||||||...        .+..+.+.+.++..+++|+.|++.+++.++|.|++. .+      +||+
T Consensus        83 ~~~~~~~~~~~iD~li~nAG~~~--------~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~------riv~  147 (313)
T PRK05854         83 LGEQLRAEGRPIHLLINNAGVMT--------PPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RA------RVTS  147 (313)
T ss_pred             HHHHHHHhCCCccEEEECCcccc--------CCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CC------CeEE
Confidence            99999999999999999999764        122356778999999999999999999999999764 23      9999


Q ss_pred             eecCcccCCC---------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          177 LSARVGSIGD---------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       177 iss~~~~~~~---------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +||..+..+.         .+.++...|+.||+++..|++.|+
T Consensus       148 vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la  190 (313)
T PRK05854        148 QSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELD  190 (313)
T ss_pred             EechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHH
Confidence            9998775542         123556789999999999999995

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.96  E-value=3.5e-29  Score=200.74  Aligned_cols=172  Identities=23%  Similarity=0.354  Sum_probs=152.1

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .+.+++++|+++||||+++||.+++++|+++|++  |++++|+++.++.+.+.+.+.+.++.++.||+++++++.+++++
T Consensus         4 ~~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   81 (256)
T PRK06124          4 LQRFSLAGQVALVTGSARGLGFEIARALAGAGAH--VLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFAR   81 (256)
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHcCCe--EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            4467789999999999999999999999999997  99999988766655555555566788999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+++.|.+++.+      ++|++||.
T Consensus        82 ~~~~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~ss~  148 (256)
T PRK06124         82 IDAEHGRLDILVNNVGARD-------RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYG------RIIAITSI  148 (256)
T ss_pred             HHHhcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEeec
Confidence            9999999999999999764       4567788899999999999999999999999999877655      99999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+..+   .++...|+++|++++++++.++
T Consensus       149 ~~~~~---~~~~~~Y~~sK~a~~~~~~~la  175 (256)
T PRK06124        149 AGQVA---RAGDAVYPAAKQGLTGLMRALA  175 (256)
T ss_pred             hhccC---CCCccHhHHHHHHHHHHHHHHH
Confidence            88777   5788999999999999999983

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.7e-29  Score=201.51  Aligned_cols=163  Identities=21%  Similarity=0.349  Sum_probs=140.7

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|+++||||++|||+++|++|+++|++  |++++|+.+.++++.+   +.+.++.+++||++|++++.++++++.+.
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGAR--VAIVDIDADNGAAVAA---SLGERARFIATDITDDAAIERAVATVVAR   77 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---HhCCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999997  9999998765544332   22457889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||||...       ... .+.+.++|++.+++|+.+++.+++.+.++|+ ++.|      +||++||..+..
T Consensus        78 ~g~id~lv~~ag~~~-------~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g------~ii~isS~~~~~  142 (261)
T PRK08265         78 FGRVDILVNLACTYL-------DDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGG------AIVNFTSISAKF  142 (261)
T ss_pred             hCCCCEEEECCCCCC-------CCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCc------EEEEECchhhcc
Confidence            999999999999753       122 2467889999999999999999999999997 4444      999999998887


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .+++..|+++|+++++++++++
T Consensus       143 ~---~~~~~~Y~asKaa~~~~~~~la  165 (261)
T PRK08265        143 A---QTGRWLYPASKAAIRQLTRSMA  165 (261)
T ss_pred             C---CCCCchhHHHHHHHHHHHHHHH
Confidence            7   5778899999999999999984

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.8e-29  Score=205.51  Aligned_cols=175  Identities=22%  Similarity=0.285  Sum_probs=146.8

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .+.+.+++|+++||||++|||.++|++|+++|++  |++++|+.+.++.+.+.+.+.+.++.++++|++|.+++.+++++
T Consensus        33 ~~~~~~~~k~vlItGasggIG~~la~~La~~G~~--Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~  110 (293)
T PRK05866         33 RQPVDLTGKRILLTGASSGIGEAAAEQFARRGAT--VVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVAD  110 (293)
T ss_pred             CCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            3457788999999999999999999999999997  99999998776665555544456788999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhh--ccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNK--VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +.+.++++|++|||||...       ..++.+  .+.++++..+++|+.|++.+++.++|+|++.+.+      +||++|
T Consensus       111 ~~~~~g~id~li~~AG~~~-------~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~is  177 (293)
T PRK05866        111 VEKRIGGVDILINNAGRSI-------RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDG------HIINVA  177 (293)
T ss_pred             HHHHcCCCCEEEECCCCCC-------CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------EEEEEC
Confidence            9999999999999999864       233333  2357788999999999999999999999887765      999999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+..+.  .++...|+++|+|+++|++++ .|+
T Consensus       178 S~~~~~~~--~p~~~~Y~asKaal~~l~~~la~e~  210 (293)
T PRK05866        178 TWGVLSEA--SPLFSVYNASKAALSAVSRVIETEW  210 (293)
T ss_pred             ChhhcCCC--CCCcchHHHHHHHHHHHHHHHHHHh
Confidence            97655432  466789999999999999999 444

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.3e-29  Score=198.27  Aligned_cols=164  Identities=22%  Similarity=0.299  Sum_probs=142.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||++|||.+++++|+++|++  |++++|+.+.        ...+.++.++++|++++++++++++++.+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~--v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGAT--VVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVE   71 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999997  9999998653        11245688999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||...       ..+..+.+.+.|++.+++|+.+++.+++.+.+.|.+++.+     ++||++||..+.
T Consensus        72 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----g~ii~isS~~~~  139 (252)
T PRK07856         72 RHGRLDVLVNNAGGSP-------YALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGG-----GSIVNIGSVSGR  139 (252)
T ss_pred             HcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----cEEEEEcccccC
Confidence            9999999999999763       4556778889999999999999999999999999765321     399999999888


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+++++|++++ .||
T Consensus       140 ~~---~~~~~~Y~~sK~a~~~l~~~la~e~  166 (252)
T PRK07856        140 RP---SPGTAAYGAAKAGLLNLTRSLAVEW  166 (252)
T ss_pred             CC---CCCCchhHHHHHHHHHHHHHHHHHh
Confidence            77   578899999999999999998 444

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.96  E-value=7.1e-29  Score=198.00  Aligned_cols=168  Identities=22%  Similarity=0.296  Sum_probs=143.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||++|||.++|++|+++|++  |++++|+..  +...+.+.+.+.++.++++|+++++++.++++++.+
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~--vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGAD--IVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVE   76 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999997  888888652  233444444456789999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeecCcc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVG  182 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~  182 (214)
                      .++++|++|||||...       ..+..+.+.++|++.+++|+.+++.+++.+.++|++++ .+      +||++||..+
T Consensus        77 ~~~~~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g------~iv~~sS~~~  143 (248)
T TIGR01832        77 EFGHIDILVNNAGIIR-------RADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGG------KIINIASMLS  143 (248)
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCe------EEEEEecHHh
Confidence            9999999999999864       34566788899999999999999999999999997654 33      9999999887


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      ..+   .+....|+++|+++++++++++.
T Consensus       144 ~~~---~~~~~~Y~~sKaa~~~~~~~la~  169 (248)
T TIGR01832       144 FQG---GIRVPSYTASKHGVAGLTKLLAN  169 (248)
T ss_pred             ccC---CCCCchhHHHHHHHHHHHHHHHH
Confidence            766   46678999999999999999943

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=5.1e-29  Score=200.15  Aligned_cols=168  Identities=20%  Similarity=0.250  Sum_probs=142.8

Q ss_pred             cccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCC-----------CcccccchhhcCCCceeEEEecCCCH
Q 028056           25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPN-----------GATGLLDLKNRFPERLDVLQLDLTVE   91 (214)
Q Consensus        25 ~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~-----------~~~~~~~~~~~~~~~~~~~~~Dl~~~   91 (214)
                      ++++|+++||||+  +|||.++|++|+++|++  |++.+++..           ..+...+.+.+.+.++.++++|++|+
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~--vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~   80 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGAD--IFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQN   80 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCe--EEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            5889999999999  49999999999999997  777654311           11122333444566888999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCc
Q 028056           92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV  171 (214)
Q Consensus        92 ~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~  171 (214)
                      ++++++++++.+.++++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|     
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-----  148 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYST-------NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGG-----  148 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCe-----
Confidence            9999999999999999999999999764       4567889999999999999999999999999999876554     


Q ss_pred             eEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       172 ~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       +||++||..+..+   .+++..|+++|+++++|+++++
T Consensus       149 -~iv~isS~~~~~~---~~~~~~Y~~sK~a~~~l~~~la  183 (256)
T PRK12859        149 -RIINMTSGQFQGP---MVGELAYAATKGAIDALTSSLA  183 (256)
T ss_pred             -EEEEEcccccCCC---CCCchHHHHHHHHHHHHHHHHH
Confidence             9999999988766   6788999999999999999984

>PRK05599 hypothetical protein; Provisional

Probab=99.96  E-value=3.4e-29  Score=200.09  Aligned_cols=163  Identities=20%  Similarity=0.218  Sum_probs=138.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCC-ceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      ++++||||++|||.++|++|+ +|++  |++.+|++++++++.+.+.+.+. ++.+++||++|+++++++++++.+.+++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~--Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   77 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGED--VVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGE   77 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCE--EEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999 5876  99999998877766555554443 5788999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeecCcccCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      +|++|||||...       ..+..+.+.+.+.+.+++|+.+.+.+++.++|.|.+++ .|      .|||+||..+..+ 
T Consensus        78 id~lv~nag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g------~Iv~isS~~~~~~-  143 (246)
T PRK05599         78 ISLAVVAFGILG-------DQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPA------AIVAFSSIAGWRA-  143 (246)
T ss_pred             CCEEEEecCcCC-------CchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCC------EEEEEeccccccC-
Confidence            999999999864       22344566677888899999999999999999998654 34      9999999998876 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .+++..|+++|+|+.+|+++|+
T Consensus       144 --~~~~~~Y~asKaa~~~~~~~la  165 (246)
T PRK05599        144 --RRANYVYGSTKAGLDAFCQGLA  165 (246)
T ss_pred             --CcCCcchhhHHHHHHHHHHHHH
Confidence              5778899999999999999994

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.6e-29  Score=199.50  Aligned_cols=169  Identities=24%  Similarity=0.341  Sum_probs=147.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|++|||||++|||.+++++|+++|++  |++++|+.++.+.+.+.+...+.++.++.+|+++++++.++++++.+
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGAD--VLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE   83 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  99999987766655554444456788999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcC-CCCCCCCceEEEEeecCcc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG-GTGIERDVAVVANLSARVG  182 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~~~~~~~iv~iss~~~  182 (214)
                      .++++|++|||||...       ..++.+.+.+++++.+++|+.+++.+++.+.++|.+. +.+      ++|++||..+
T Consensus        84 ~~~~id~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g------~iv~~sS~~~  150 (263)
T PRK07814         84 AFGRLDIVVNNVGGTM-------PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGG------SVINISSTMG  150 (263)
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCe------EEEEEccccc
Confidence            9999999999999764       3556778899999999999999999999999999873 333      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|+++++++++++
T Consensus       151 ~~~---~~~~~~Y~~sK~a~~~~~~~~~  175 (263)
T PRK07814        151 RLA---GRGFAAYGTAKAALAHYTRLAA  175 (263)
T ss_pred             cCC---CCCCchhHHHHHHHHHHHHHHH
Confidence            776   5778899999999999999983

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.96  E-value=8.6e-29  Score=198.90  Aligned_cols=167  Identities=19%  Similarity=0.239  Sum_probs=141.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++||||++|||.+++++|+++|++  |++++|++. .+...+.+...+.++.++++|++|.+++.++++++.+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~--v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGAR--VVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  888998753 2233333334456788999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||...      ...++.+.+.++|++.+++|+.+++++++.++|+|++++.+      +||++||..+.
T Consensus        81 ~~~~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~~sS~~~~  148 (260)
T PRK12823         81 AFGRIDVLINNVGGTI------WAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGG------AIVNVSSIATR  148 (260)
T ss_pred             HcCCCeEEEECCcccc------CCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------eEEEEcCcccc
Confidence            9999999999999642      23567788999999999999999999999999999877655      99999998663


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       +    .+...|+++|+++++|+++++
T Consensus       149 -~----~~~~~Y~~sK~a~~~~~~~la  170 (260)
T PRK12823        149 -G----INRVPYSAAKGGVNALTASLA  170 (260)
T ss_pred             -C----CCCCccHHHHHHHHHHHHHHH
Confidence             2    345689999999999999984

>PRK05717 oxidoreductase; Validated

Probab=99.96  E-value=8.5e-29  Score=198.54  Aligned_cols=169  Identities=25%  Similarity=0.357  Sum_probs=144.2

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +.++++||+++||||+++||.++|++|+++|++  |++++++.++.++.   ....+.++.++++|+++.+++.++++++
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~--v~~~~~~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQ--VVLADLDRERGSKV---AKALGENAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCE--EEEEcCCHHHHHHH---HHHcCCceEEEEccCCCHHHHHHHHHHH
Confidence            457789999999999999999999999999997  88888876544332   2223457889999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|++|||||....     ...++.+.+.++|++.+++|+.+++.+++.+.|+|++.+ +      +||++||..
T Consensus        79 ~~~~g~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g------~ii~~sS~~  146 (255)
T PRK05717         79 LGQFGRLDALVCNAAIADP-----HNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN-G------AIVNLASTR  146 (255)
T ss_pred             HHHhCCCCEEEECCCcccC-----CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-c------EEEEEcchh
Confidence            9999999999999997641     124667788999999999999999999999999987643 3      899999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   .+.+..|+++|+++++++++++
T Consensus       147 ~~~~---~~~~~~Y~~sKaa~~~~~~~la  172 (255)
T PRK05717        147 ARQS---EPDTEAYAASKGGLLALTHALA  172 (255)
T ss_pred             hcCC---CCCCcchHHHHHHHHHHHHHHH
Confidence            8877   5678899999999999999984

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.96  E-value=1.1e-28  Score=197.94  Aligned_cols=170  Identities=21%  Similarity=0.287  Sum_probs=146.5

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +.+++++|+++||||++|||.+++++|+++|++  |++.+|+.+..+...+.+...+.++.++.+|++|.++++++++.+
T Consensus         5 ~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~--vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   82 (255)
T PRK06113          5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGAS--VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFA   82 (255)
T ss_pred             cccCcCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            346788999999999999999999999999997  888898877665554444444567889999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|++|||+|...       ..+. +.+.+++++.+++|+.+++.+++++.|+|.+.+.+      +||++||..
T Consensus        83 ~~~~~~~d~li~~ag~~~-------~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~  148 (255)
T PRK06113         83 LSKLGKVDILVNNAGGGG-------PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG------VILTITSMA  148 (255)
T ss_pred             HHHcCCCCEEEECCCCCC-------CCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc------EEEEEeccc
Confidence            999999999999999764       2223 57788999999999999999999999999766544      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   .+++..|+++|+++++++++++
T Consensus       149 ~~~~---~~~~~~Y~~sK~a~~~~~~~la  174 (255)
T PRK06113        149 AENK---NINMTSYASSKAAASHLVRNMA  174 (255)
T ss_pred             ccCC---CCCcchhHHHHHHHHHHHHHHH
Confidence            8877   5677899999999999999984

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.4e-29  Score=199.17  Aligned_cols=165  Identities=19%  Similarity=0.237  Sum_probs=141.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|+++||||++|||.+++++|+++|++  |++++|+.+.++.+.+.+...+ ++.+++||++|++++.++++++.+++++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGAT--LGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            479999999999999999999999997  9999998776554444333222 7889999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||+|...      ......+.+.+++++.+++|+.|++.+++.++|.|++++.+      .||++||..+..+  
T Consensus        79 id~lv~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~------~iv~isS~~~~~~--  144 (257)
T PRK07024         79 PDVVIANAGISV------GTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRG------TLVGIASVAGVRG--  144 (257)
T ss_pred             CCEEEECCCcCC------CccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCC------EEEEEechhhcCC--
Confidence            999999999754      12223346788999999999999999999999999887665      9999999998887  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .++...|+++|++++.|+++++
T Consensus       145 -~~~~~~Y~asK~a~~~~~~~l~  166 (257)
T PRK07024        145 -LPGAGAYSASKAAAIKYLESLR  166 (257)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHH
Confidence             5778899999999999999984

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.96  E-value=1e-28  Score=198.95  Aligned_cols=166  Identities=23%  Similarity=0.307  Sum_probs=138.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +.+++|+++||||++|||.+++++|+++|++  |++.+|+++.++.+.+   ..+.++.++++|++|+++++++++++.+
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGAR--VAVLERSAEKLASLRQ---RFGDHVLVVEGDVTSYADNQRAVDQTVD   76 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---HhCCcceEEEccCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999997  9999998765444332   2345688999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHh----hhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKS----SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      .++++|++|||||+..      ...++.+.+.+    .|++.+++|+.+++.+++.++|.|++.+ |      +||+++|
T Consensus        77 ~~g~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g------~iv~~sS  143 (263)
T PRK06200         77 AFGKLDCFVGNAGIWD------YNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-G------SMIFTLS  143 (263)
T ss_pred             hcCCCCEEEECCCCcc------cCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-C------EEEEECC
Confidence            9999999999999753      12233344444    3889999999999999999999987643 3      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+..+   .++...|+++|+++++|+++++
T Consensus       144 ~~~~~~---~~~~~~Y~~sK~a~~~~~~~la  171 (263)
T PRK06200        144 NSSFYP---GGGGPLYTASKHAVVGLVRQLA  171 (263)
T ss_pred             hhhcCC---CCCCchhHHHHHHHHHHHHHHH
Confidence            988776   4677899999999999999994

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.3e-28  Score=197.52  Aligned_cols=165  Identities=21%  Similarity=0.367  Sum_probs=138.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||++|||.++|++|+++|++  |++.+++.+..   .+.+..  .++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~--v~~~~~~~~~~---~~~l~~--~~~~~~~~Dl~~~~~~~~~~~~~~~   75 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAK--VAVLYNSAENE---AKELRE--KGVFTIKCDVGNRDQVKKSKEVVEK   75 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCcHHH---HHHHHh--CCCeEEEecCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999997  77766544321   111211  1478899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||...       ..++.+.+.++|++.+++|+.+++++++.++|.|++++.+      +||++||..+.
T Consensus        76 ~~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g------~iv~isS~~~~  142 (255)
T PRK06463         76 EFGRVDVLVNNAGIMY-------LMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNG------AIVNIASNAGI  142 (255)
T ss_pred             HcCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcCHHhC
Confidence            9999999999999864       4566778899999999999999999999999999866554      99999998876


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+.  .++...|+++|+|+++|+++++
T Consensus       143 ~~~--~~~~~~Y~asKaa~~~~~~~la  167 (255)
T PRK06463        143 GTA--AEGTTFYAITKAGIIILTRRLA  167 (255)
T ss_pred             CCC--CCCccHhHHHHHHHHHHHHHHH
Confidence            432  4567889999999999999994

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=8.5e-29  Score=198.96  Aligned_cols=170  Identities=21%  Similarity=0.266  Sum_probs=135.9

Q ss_pred             cccCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~--s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++|+++||||  ++|||.++|++|+++|++  |++.+|+... +...+...+.+.++.+++||++|+++++++++++.
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~--v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAE--VVLTGFGRAL-RLTERIAKRLPEPAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCE--EEEecCccch-hHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHH
Confidence            478999999999  899999999999999997  8888876421 11222222233467889999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||||+.... .  ...++.+.+.++|++.+++|+.+++.+++.++|+|+++  |      +||++++.. 
T Consensus        81 ~~~g~iD~li~nAG~~~~~-~--~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~--g------~Iv~is~~~-  148 (256)
T PRK07889         81 EHVDGLDGVVHSIGFAPQS-A--LGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEG--G------SIVGLDFDA-  148 (256)
T ss_pred             HHcCCCcEEEEcccccccc-c--cCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccC--c------eEEEEeecc-
Confidence            9999999999999976310 0  01346677889999999999999999999999999743  3      899998653 


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .+.+..|++||+|+.+|+++| .||
T Consensus       149 ~~~---~~~~~~Y~asKaal~~l~~~la~el  176 (256)
T PRK07889        149 TVA---WPAYDWMGVAKAALESTNRYLARDL  176 (256)
T ss_pred             ccc---CCccchhHHHHHHHHHHHHHHHHHh
Confidence            233   467788999999999999999 444

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.4e-29  Score=198.17  Aligned_cols=167  Identities=25%  Similarity=0.307  Sum_probs=138.4

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +++|+++||||++|||.++|++|++.|++  |++.. ++.+..+...+.+...+.++..+++|+++.++++.+++++.+.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGAL--VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCe--EEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999997  76654 4444444443444444567888999999999999999888753


Q ss_pred             ----cC--CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056          105 ----YG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus       105 ----~~--~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                          ++  ++|++|||||...       ..++.+.+.++|++++++|+.+++.+++.++|.|++.  |      +||++|
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g------~iv~is  144 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGP-------GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--S------RIINIS  144 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--C------eEEEEC
Confidence                33  8999999999753       4556778889999999999999999999999999753  3      999999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+..+   .++...|++||++++++++++ .|+
T Consensus       145 S~~~~~~---~~~~~~Y~~sKaa~~~~~~~la~e~  176 (252)
T PRK12747        145 SAATRIS---LPDFIAYSMTKGAINTMTFTLAKQL  176 (252)
T ss_pred             CcccccC---CCCchhHHHHHHHHHHHHHHHHHHH
Confidence            9988876   577889999999999999998 444

>PRK08643 acetoin reductase; Validated

Probab=99.96  E-value=1.3e-28  Score=197.40  Aligned_cols=166  Identities=24%  Similarity=0.360  Sum_probs=145.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|+++||||++|||.+++++|+++|++  |++++|+.+..+.+...+...+.++.++++|++++++++++++++.+++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFK--VAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999997  999999887666555555544567889999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||||...       ..++.+.+.+++++.+++|+.+++.+++.+.+.|++.+.+     ++||++||..+..+  
T Consensus        80 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~iv~~sS~~~~~~--  145 (256)
T PRK08643         80 LNVVVNNAGVAP-------TTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHG-----GKIINATSQAGVVG--  145 (256)
T ss_pred             CCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----CEEEEECccccccC--
Confidence            999999999763       4567788899999999999999999999999999775432     38999999988777  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .++...|+++|++++.++++++
T Consensus       146 -~~~~~~Y~~sK~a~~~~~~~la  167 (256)
T PRK08643        146 -NPELAVYSSTKFAVRGLTQTAA  167 (256)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHH
Confidence             5678899999999999999984

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.3e-28  Score=198.75  Aligned_cols=168  Identities=16%  Similarity=0.221  Sum_probs=145.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||++|||.+++++|+++|++  |++++|+.+..+...+.+...+.++.++.+|++|++++.++++++.+
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGAN--VAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIAD   82 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999997  99999987765554444444455778899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||...       ..++.+.+.+++++.+++|+.+++.+++++.++|++.+ |      +|+++||..+.
T Consensus        83 ~~~~iD~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g------~iv~iss~~~~  148 (264)
T PRK07576         83 EFGPIDVLVSGAAGNF-------PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-A------SIIQISAPQAF  148 (264)
T ss_pred             HcCCCCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-C------EEEEECChhhc
Confidence            9999999999998653       35567788899999999999999999999999987543 3      99999998887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .+++..|+++|+++++|+++++
T Consensus       149 ~~---~~~~~~Y~asK~a~~~l~~~la  172 (264)
T PRK07576        149 VP---MPMQAHVCAAKAGVDMLTRTLA  172 (264)
T ss_pred             cC---CCCccHHHHHHHHHHHHHHHHH
Confidence            66   5778899999999999999983

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.96  E-value=1.9e-28  Score=197.17  Aligned_cols=170  Identities=19%  Similarity=0.243  Sum_probs=144.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++++|+++||||+++||.++|++|+++|++  |++..|+.. ..+.+.+.+...+.++.++.+|++|.+++.++++++.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~--vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~   80 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAK--VVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAV   80 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            4588999999999999999999999999997  777777543 3333444444445678899999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++++|.+.+..     ++||++||..+
T Consensus        81 ~~~g~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~-----g~iv~~sS~~~  148 (261)
T PRK08936         81 KEFGTLDVMINNAGIEN-------AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIK-----GNIINMSSVHE  148 (261)
T ss_pred             HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----cEEEEEccccc
Confidence            99999999999999764       4556778899999999999999999999999999876421     39999999887


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .+++..|+++|+|+++++++++
T Consensus       149 ~~~---~~~~~~Y~~sKaa~~~~~~~la  173 (261)
T PRK08936        149 QIP---WPLFVHYAASKGGVKLMTETLA  173 (261)
T ss_pred             cCC---CCCCcccHHHHHHHHHHHHHHH
Confidence            766   5778899999999999999994

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.6e-28  Score=196.97  Aligned_cols=168  Identities=18%  Similarity=0.258  Sum_probs=146.5

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++|+++||||+++||+++|++|+++|++  |++++|+++..+.+.+.+...+.++.++.+|++|+++++++++++.+.
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGAD--VVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999997  999999887665555555444567899999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||||...      +..++.+.+.+++++.+++|+.+++.+++++.++|.+.+ +      +||++||..+..
T Consensus        80 ~g~~d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~------~ii~~sS~~~~~  146 (258)
T PRK07890         80 FGRVDALVNNAFRVP------SMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-G------SIVMINSMVLRH  146 (258)
T ss_pred             cCCccEEEECCccCC------CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-C------EEEEEechhhcc
Confidence            999999999999764      235567788999999999999999999999999987654 3      999999998876


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .+++..|+++|++++.++++++
T Consensus       147 ~---~~~~~~Y~~sK~a~~~l~~~~a  169 (258)
T PRK07890        147 S---QPKYGAYKMAKGALLAASQSLA  169 (258)
T ss_pred             C---CCCcchhHHHHHHHHHHHHHHH
Confidence            6   5778899999999999999984

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.5e-28  Score=196.56  Aligned_cols=169  Identities=22%  Similarity=0.296  Sum_probs=145.8

Q ss_pred             ccccCcEEEEecCCC-chhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-CC-CceeEEEecCCCHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASR-GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FP-ERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        24 ~~l~~k~vlItG~s~-giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ..+++|+++||||+| |||.+++++|+++|++  |++.+|+.++++...+.+.+ .+ .++.++++|+++++++++++++
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   90 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGAR--VVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDA   90 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            456789999999985 9999999999999997  88999988776655444433 33 3688999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeec
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSA  179 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss  179 (214)
                      +.+.++++|++|||+|...       ..++.+.+.++|.+.+++|+.+++.+++.++|+|+..+ .+      .|++++|
T Consensus        91 ~~~~~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g------~iv~~ss  157 (262)
T PRK07831         91 AVERLGRLDVLVNNAGLGG-------QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGG------VIVNNAS  157 (262)
T ss_pred             HHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc------EEEEeCc
Confidence            9999999999999999753       45677888899999999999999999999999998765 44      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+..+   .++...|+++|+|+++++++++
T Consensus       158 ~~~~~~---~~~~~~Y~~sKaal~~~~~~la  185 (262)
T PRK07831        158 VLGWRA---QHGQAHYAAAKAGVMALTRCSA  185 (262)
T ss_pred             hhhcCC---CCCCcchHHHHHHHHHHHHHHH
Confidence            888776   5778899999999999999994

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.5e-28  Score=194.71  Aligned_cols=165  Identities=22%  Similarity=0.346  Sum_probs=141.5

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +..++++|++|||||++|||.+++++|+++|++  |++.+|++...         ...++.+++||++|+++++++++++
T Consensus         3 ~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~--v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~   71 (260)
T PRK06523          3 FFLELAGKRALVTGGTKGIGAATVARLLEAGAR--VVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAV   71 (260)
T ss_pred             cCcCCCCCEEEEECCCCchhHHHHHHHHHCCCE--EEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999997  99999976431         1346788999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|++|||||....     +..++.+.+.++|++.+++|+.+++.+++.++++|++++.+      +||++||..
T Consensus        72 ~~~~~~id~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~ii~isS~~  140 (260)
T PRK06523         72 LERLGGVDILVHVLGGSSA-----PAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSG------VIIHVTSIQ  140 (260)
T ss_pred             HHHcCCCCEEEECCccccc-----CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc------EEEEEeccc
Confidence            9999999999999996531     13456678889999999999999999999999999877655      999999988


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+.  ..+...|+++|+++++++++++
T Consensus       141 ~~~~~--~~~~~~Y~~sK~a~~~l~~~~a  167 (260)
T PRK06523        141 RRLPL--PESTTAYAAAKAALSTYSKSLS  167 (260)
T ss_pred             ccCCC--CCCcchhHHHHHHHHHHHHHHH
Confidence            87652  2367899999999999999994

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.96  E-value=5.3e-28  Score=194.99  Aligned_cols=168  Identities=23%  Similarity=0.359  Sum_probs=141.9

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|+++||||++|||.+++++|+++|++  |++.++++...+         ..++.++++|++|+++++++++++.
T Consensus         4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~--v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~   72 (266)
T PRK06171          4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGAN--VVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEII   72 (266)
T ss_pred             cccCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999997  888888775432         2367789999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCC--CCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          103 EKYGSLNLLINASGILSIPNVLQ--PETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.++++|++|||||.........  ...+..+.+.++|++.+++|+.+++.+++++.++|++++.+      +||++||.
T Consensus        73 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~  146 (266)
T PRK06171         73 EKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDG------VIVNMSSE  146 (266)
T ss_pred             HHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCc------EEEEEccc
Confidence            99999999999999753110000  01223467889999999999999999999999999877655      99999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+..+   .++...|+++|+++++++++++
T Consensus       147 ~~~~~---~~~~~~Y~~sK~a~~~l~~~la  173 (266)
T PRK06171        147 AGLEG---SEGQSCYAATKAALNSFTRSWA  173 (266)
T ss_pred             cccCC---CCCCchhHHHHHHHHHHHHHHH
Confidence            88877   5778899999999999999984

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=2.1e-28  Score=195.36  Aligned_cols=168  Identities=21%  Similarity=0.266  Sum_probs=144.9

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +++++++||||+++||++++++|+++|++ .+++..|+.+..+.+.+.+...+.++.++.+|++|++++.++++++.+.+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYD-IAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56789999999999999999999999997 33446787766555555555556778999999999999999999999999


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|+||||+|...       ..++.+.+.+.+++.+++|+.+++.+++++.++|++++.+      +||++||..+..+
T Consensus        81 ~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~~sS~~~~~~  147 (250)
T PRK08063         81 GRLDVFVNNAASGV-------LRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGG------KIISLSSLGSIRY  147 (250)
T ss_pred             CCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe------EEEEEcchhhccC
Confidence            99999999999764       4567788899999999999999999999999999877655      9999999877665


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                         .++...|+++|+++++|+++++
T Consensus       148 ---~~~~~~y~~sK~a~~~~~~~~~  169 (250)
T PRK08063        148 ---LENYTTVGVSKAALEALTRYLA  169 (250)
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHH
Confidence               5677899999999999999984

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.6e-28  Score=195.02  Aligned_cols=168  Identities=24%  Similarity=0.322  Sum_probs=146.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++|+++||||+++||.+++++|+++|++  |++++|+.+..+...+.+. .+.++.+++||++|+++++++++++.+
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~   77 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGAR--VVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAA   77 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCe--EEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  9999998766554433333 356788999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||+|...       .....+.+.+++++.+++|+.+++.+++.+++.|++++.+      +|+++||..+.
T Consensus        78 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~ii~~sS~~~~  144 (252)
T PRK06138         78 RWGRLDVLVNNAGFGC-------GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGG------SIVNTASQLAL  144 (252)
T ss_pred             HcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCe------EEEEECChhhc
Confidence            9999999999999764       3556678889999999999999999999999999877655      99999999887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|++++.++++++
T Consensus       145 ~~---~~~~~~Y~~sK~a~~~~~~~l~  168 (252)
T PRK06138        145 AG---GRGRAAYVASKGAIASLTRAMA  168 (252)
T ss_pred             cC---CCCccHHHHHHHHHHHHHHHHH
Confidence            76   4677899999999999999984

>PRK05855 short chain dehydrogenase; Validated

Probab=99.96  E-value=1.5e-28  Score=217.68  Aligned_cols=171  Identities=20%  Similarity=0.217  Sum_probs=151.7

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ...++++++|||||++|||.+++++|+++|++  |++++|+.++++++.+.+...+.++.+++||++|++++.++++++.
T Consensus       310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  387 (582)
T PRK05855        310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAE--VVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVR  387 (582)
T ss_pred             cccCCCCEEEEECCcCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            35577899999999999999999999999997  9999999877666655555556688999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||||...       ..++.+.+.+++++.+++|+.|++.+++.++|+|.+++.+     ++||++||..+
T Consensus       388 ~~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~-----g~iv~~sS~~~  455 (582)
T PRK05855        388 AEHGVPDIVVNNAGIGM-------AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTG-----GHIVNVASAAA  455 (582)
T ss_pred             HhcCCCcEEEECCccCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----cEEEEECChhh
Confidence            99999999999999864       4667788999999999999999999999999999886532     39999999998


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|+++++++++++
T Consensus       456 ~~~---~~~~~~Y~~sKaa~~~~~~~l~  480 (582)
T PRK05855        456 YAP---SRSLPAYATSKAAVLMLSECLR  480 (582)
T ss_pred             ccC---CCCCcHHHHHHHHHHHHHHHHH
Confidence            877   5788999999999999999994

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.96  E-value=3.5e-28  Score=193.76  Aligned_cols=167  Identities=19%  Similarity=0.253  Sum_probs=141.4

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEE-eecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +++|+++||||+++||+++|++|+++|++  |++ ..++....+...+.+...+.++..+.||++|.+++.++++++.+.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~--vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFK--VVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCE--EEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999997  555 444443333333333444567888899999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.+.+.|++++.+      +||++||..+..
T Consensus        79 ~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~  145 (246)
T PRK12938         79 VGEIDVLVNNAGITR-------DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWG------RIINISSVNGQK  145 (246)
T ss_pred             hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe------EEEEEechhccC
Confidence            999999999999764       3567788999999999999999999999999999877655      999999988877


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|+++|+++++++++++
T Consensus       146 ~---~~~~~~y~~sK~a~~~~~~~l~  168 (246)
T PRK12938        146 G---QFGQTNYSTAKAGIHGFTMSLA  168 (246)
T ss_pred             C---CCCChhHHHHHHHHHHHHHHHH
Confidence            6   5778899999999999999984

>PRK06484 short chain dehydrogenase; Validated

Probab=99.96  E-value=2.3e-28  Score=214.52  Aligned_cols=165  Identities=24%  Similarity=0.361  Sum_probs=143.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ....+|+++||||++|||+++|++|+++|++  |++.+|+++.++.+.+   +.+.++..+.+|++|+++++++++++.+
T Consensus       265 ~~~~~k~~lItGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~  339 (520)
T PRK06484        265 LAESPRVVAITGGARGIGRAVADRFAAAGDR--LLIIDRDAEGAKKLAE---ALGDEHLSVQADITDEAAVESAFAQIQA  339 (520)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---HhCCceeEEEccCCCHHHHHHHHHHHHH
Confidence            3557999999999999999999999999997  9999998766544333   2345677899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...      +..++.+.+.++|++.+++|+.+++++++.++|+|.+  .|      +||++||..+.
T Consensus       340 ~~g~id~li~nAg~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g------~iv~isS~~~~  405 (520)
T PRK06484        340 RWGRLDVLVNNAGIAE------VFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ--GG------VIVNLGSIASL  405 (520)
T ss_pred             HcCCCCEEEECCCCcC------CCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc--CC------EEEEECchhhc
Confidence            9999999999999763      2356778899999999999999999999999999932  23      99999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .+++..|+++|+++++|+++++
T Consensus       406 ~~---~~~~~~Y~asKaal~~l~~~la  429 (520)
T PRK06484        406 LA---LPPRNAYCASKAAVTMLSRSLA  429 (520)
T ss_pred             CC---CCCCchhHHHHHHHHHHHHHHH
Confidence            87   5788999999999999999994

>PRK12743 oxidoreductase; Provisional

Probab=99.96  E-value=4.6e-28  Score=194.49  Aligned_cols=166  Identities=19%  Similarity=0.266  Sum_probs=142.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +|+++||||++|||.+++++|+++|++  |+++.+ +.+..+.+.+.+...+.++.++.+|+++.++++++++++.+.++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFD--IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999997  766654 44444555555555567899999999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++++.++|.+++.+     ++||++||..+..+ 
T Consensus        80 ~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-----g~ii~isS~~~~~~-  146 (256)
T PRK12743         80 RIDVLVNNAGAMT-------KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQG-----GRIINITSVHEHTP-  146 (256)
T ss_pred             CCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----eEEEEEeeccccCC-
Confidence            9999999999864       3456778899999999999999999999999999765432     49999999887776 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .++...|+++|+++++++++++
T Consensus       147 --~~~~~~Y~~sK~a~~~l~~~la  168 (256)
T PRK12743        147 --LPGASAYTAAKHALGGLTKAMA  168 (256)
T ss_pred             --CCCcchhHHHHHHHHHHHHHHH
Confidence              5778899999999999999984

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.96  E-value=4.5e-28  Score=200.20  Aligned_cols=172  Identities=19%  Similarity=0.215  Sum_probs=139.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .+|+++||||++|||.++|++|+++| ++  |++++|+.++.+++.+.+...+.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~--V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWH--VIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCE--EEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999 76  9999998876655444443334568889999999999999999998888


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|++|||||+..      +..+..+.+.++|+..+++|+.+++++++.++|+|++++.+    .++||++||..+...
T Consensus        80 ~~iD~lI~nAG~~~------~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~----~g~IV~vsS~~~~~~  149 (314)
T TIGR01289        80 RPLDALVCNAAVYF------PTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNK----DKRLIIVGSITGNTN  149 (314)
T ss_pred             CCCCEEEECCCccc------cCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCC----CCeEEEEecCccccc
Confidence            99999999999753      12233456789999999999999999999999999876410    139999999876421


Q ss_pred             C------------------------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 D------------------------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~------------------------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .                              .+..++..|++||+++..+++.|+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la  204 (314)
T TIGR01289       150 TLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELH  204 (314)
T ss_pred             cCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHH
Confidence            0                              112356789999999999999984

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.8e-28  Score=193.90  Aligned_cols=167  Identities=22%  Similarity=0.312  Sum_probs=143.0

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|++|||||++|||.++|++|+++|++  |++.+|+++.. +..+.+.+.+.++.++.+|++++++++++++++.
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~--v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAI--PVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTV   78 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCc--EEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999998  88889988765 3444444456678999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||||...       ...+.+.. ++|++.+++|+.+++.+++.+.+.+++.. +      +|+++||..+
T Consensus        79 ~~~~~id~vi~~ag~~~-------~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~------~iv~~ss~~~  143 (258)
T PRK08628         79 AKFGRIDGLVNNAGVND-------GVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKASR-G------AIVNISSKTA  143 (258)
T ss_pred             HhcCCCCEEEECCcccC-------CCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhccC-c------EEEEECCHHh
Confidence            99999999999999753       23333444 88999999999999999999999887543 3      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .+++..|+++|+++++++++++
T Consensus       144 ~~~---~~~~~~Y~~sK~a~~~~~~~l~  168 (258)
T PRK08628        144 LTG---QGGTSGYAAAKGAQLALTREWA  168 (258)
T ss_pred             ccC---CCCCchhHHHHHHHHHHHHHHH
Confidence            877   5778899999999999999984

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.96  E-value=5e-28  Score=194.59  Aligned_cols=164  Identities=21%  Similarity=0.218  Sum_probs=139.6

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++||||++|||+++|++|+++|++  |++.+|+++.+++..+.+... .++.++++|++|+++++++++++.+.++++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGAR--VVISSRNEENLEKALKELKEY-GEVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhc-CCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999999999999997  999999987666554444433 3688899999999999999999999999999


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhc-CCCCCCCCceEEEEeecCcccCCCCC
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      +||||||....     ...++.+.+.++|.+.+.+|+.+++++++.+++.|.+ ++.|      +||++||..+..+   
T Consensus        79 ~li~naG~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g------~iv~isS~~~~~~---  144 (259)
T PRK08340         79 ALVWNAGNVRC-----EPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKG------VLVYLSSVSVKEP---  144 (259)
T ss_pred             EEEECCCCCCC-----CccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCC------EEEEEeCcccCCC---
Confidence            99999997531     1234567788899999999999999999999998864 3444      9999999988766   


Q ss_pred             CCCcchhhhhHHHHHHHHHHhc
Q 028056          189 LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .++...|+++|+++.+|+++|+
T Consensus       145 ~~~~~~y~~sKaa~~~~~~~la  166 (259)
T PRK08340        145 MPPLVLADVTRAGLVQLAKGVS  166 (259)
T ss_pred             CCCchHHHHHHHHHHHHHHHHH
Confidence            5778899999999999999994

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.96  E-value=6.5e-28  Score=191.27  Aligned_cols=164  Identities=22%  Similarity=0.251  Sum_probs=136.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|++|||||++|||.+++++|+++|++  |++.+|+++...   +.+...  .+.++.+|++|+++++++++++.+.+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~---~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQP--VIVSYRTHYPAI---DGLRQA--GAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCe--EEEEeCCchhHH---HHHHHc--CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            579999999999999999999999997  888999875422   222222  3678899999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||||...       .....+.+.++|++.+++|+.+++.+++.+++.|++++.    ..+.||++||..+..+  
T Consensus        75 id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~----~~g~iv~~ss~~~~~~--  141 (236)
T PRK06483         75 LRAIIHNASDWL-------AEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH----AASDIIHITDYVVEKG--  141 (236)
T ss_pred             ccEEEECCcccc-------CCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC----CCceEEEEcchhhccC--
Confidence            999999999753       223456678999999999999999999999999987541    0138999999887766  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          188 RLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                       .+++..|+++|+++++|++++ .||
T Consensus       142 -~~~~~~Y~asKaal~~l~~~~a~e~  166 (236)
T PRK06483        142 -SDKHIAYAASKAALDNMTLSFAAKL  166 (236)
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHH
Confidence             577889999999999999999 444

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.96  E-value=4.7e-28  Score=194.41  Aligned_cols=167  Identities=22%  Similarity=0.343  Sum_probs=144.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |.+++|+++||||+++||.++|++|+++|++  |++.+|+.+..+...+.   .+.++.++++|++|+++++++++++.+
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGAR--VVIADIKPARARLAALE---IGPAAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHHH---hCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999987665443332   234688899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++++.++|.+++.+     ++||++||..+.
T Consensus        77 ~~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~iv~~sS~~~~  144 (257)
T PRK07067         77 RFGGIDILFNNAALFD-------MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRG-----GKIINMASQAGR  144 (257)
T ss_pred             HcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCC-----cEEEEeCCHHhC
Confidence            9999999999999764       4566778889999999999999999999999998765432     399999998887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|++++.++++++
T Consensus       145 ~~---~~~~~~Y~~sK~a~~~~~~~la  168 (257)
T PRK07067        145 RG---EALVSHYCATKAAVISYTQSAA  168 (257)
T ss_pred             CC---CCCCchhhhhHHHHHHHHHHHH
Confidence            77   5778899999999999999984

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.5e-28  Score=197.42  Aligned_cols=159  Identities=25%  Similarity=0.345  Sum_probs=139.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-C
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-G  106 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~  106 (214)
                      +|+++||||++|||.++|++|+++|++  |++++|+++.++.+.+      ..+.++.+|++|.++++++++++.+.+ +
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~--Vi~~~r~~~~~~~l~~------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g   75 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWR--VFATCRKEEDVAALEA------EGLEAFQLDYAEPESIAALVAQVLELSGG   75 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHH------CCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999997  9999998766543321      247789999999999999999997765 6


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|++|||||...       ..++.+.+.+++++.+++|+.|++.+++.++|.|++++.+      +||++||..+..+ 
T Consensus        76 ~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g------~iv~isS~~~~~~-  141 (277)
T PRK05993         76 RLDALFNNGAYGQ-------PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQG------RIVQCSSILGLVP-  141 (277)
T ss_pred             CccEEEECCCcCC-------CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCC------EEEEECChhhcCC-
Confidence            8999999999864       4566778899999999999999999999999999887765      9999999988776 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .++...|+++|+++++|+++|+
T Consensus       142 --~~~~~~Y~asK~a~~~~~~~l~  163 (277)
T PRK05993        142 --MKYRGAYNASKFAIEGLSLTLR  163 (277)
T ss_pred             --CCccchHHHHHHHHHHHHHHHH
Confidence              5778899999999999999984

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.6e-28  Score=194.73  Aligned_cols=165  Identities=22%  Similarity=0.302  Sum_probs=142.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-CCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +++++|+++|||+++|||.+++++|+++|++  |++++|++++.+...+.+.+ .+.++.++.+|++|++++.+++++  
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCH--LHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE--   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH--
Confidence            5678999999999999999999999999997  99999988766554444433 345788999999999999888764  


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                        ++++|++|||+|...       ..++.+.+.++|++.+++|+.+++++++.+.|.|.+++.|      +||++||..+
T Consensus        79 --~g~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~iss~~~  143 (259)
T PRK06125         79 --AGDIDILVNNAGAIP-------GGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSG------VIVNVIGAAG  143 (259)
T ss_pred             --hCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEecCccc
Confidence              479999999999764       4567789999999999999999999999999999877655      9999999888


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .+++..|+++|+++++++++++
T Consensus       144 ~~~---~~~~~~y~ask~al~~~~~~la  168 (259)
T PRK06125        144 ENP---DADYICGSAGNAALMAFTRALG  168 (259)
T ss_pred             cCC---CCCchHhHHHHHHHHHHHHHHH
Confidence            766   5677899999999999999994

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.2e-28  Score=193.32  Aligned_cols=166  Identities=21%  Similarity=0.326  Sum_probs=143.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||+++||.+++++|+++|++  |++++|+.+..+... ..  .+.++.++++|++++++++++++++.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~--Vi~~~r~~~~~~~~~-~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~   85 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGAR--VALLDRSEDVAEVAA-QL--LGGNAKGLVCDVSDSQSVEAAVAAVIS   85 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH-Hh--hCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999997  999999875322121 11  134577899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.+.++|++++.+      +||++||..+.
T Consensus        86 ~~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~  152 (255)
T PRK06841         86 AFGRIDILVNSAGVAL-------LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGG------KIVNLASQAGV  152 (255)
T ss_pred             HhCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCc------eEEEEcchhhc
Confidence            9999999999999864       4556778889999999999999999999999999876655      99999999887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .+.+..|+++|+++++++++++
T Consensus       153 ~~---~~~~~~Y~~sK~a~~~~~~~la  176 (255)
T PRK06841        153 VA---LERHVAYCASKAGVVGMTKVLA  176 (255)
T ss_pred             cC---CCCCchHHHHHHHHHHHHHHHH
Confidence            77   5778899999999999999994

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.96  E-value=5.1e-28  Score=194.29  Aligned_cols=165  Identities=21%  Similarity=0.281  Sum_probs=142.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-CC-CceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FP-ERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +|++|||||+++||.+++++|+++|++  |++++|+.+..+...+.+.. .+ .++.++.||+++++++.++++++.+.+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYR--VAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999997  99999987766554433322 22 468899999999999999999999999


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeecCcccC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~~~  184 (214)
                      +++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.+.+.|++++ .+      +||++||..+..
T Consensus        80 ~~id~vv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~------~iv~~ss~~~~~  146 (259)
T PRK12384         80 GRVDLLVYNAGIAK-------AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQG------RIIQINSKSGKV  146 (259)
T ss_pred             CCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCc------EEEEecCccccc
Confidence            99999999999764       45667788999999999999999999999999998765 34      999999988776


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .+....|+++|+++++++++++
T Consensus       147 ~---~~~~~~Y~~sKaa~~~l~~~la  169 (259)
T PRK12384        147 G---SKHNSGYSAAKFGGVGLTQSLA  169 (259)
T ss_pred             C---CCCCchhHHHHHHHHHHHHHHH
Confidence            6   4677899999999999999984

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=7.6e-28  Score=193.14  Aligned_cols=169  Identities=21%  Similarity=0.272  Sum_probs=142.4

Q ss_pred             ccccCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCC-----------CcccccchhhcCCCceeEEEecCCC
Q 028056           24 VKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPN-----------GATGLLDLKNRFPERLDVLQLDLTV   90 (214)
Q Consensus        24 ~~l~~k~vlItG~s~--giG~~~a~~l~~~g~~~~vi~~~r~~~-----------~~~~~~~~~~~~~~~~~~~~~Dl~~   90 (214)
                      +++++|+++||||++  |||.+++++|+++|++  |++.+|++.           ....+.+.....+.+++++++|+++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   78 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGID--IFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQ   78 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCc--EEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCC
Confidence            457899999999994  9999999999999997  888888722           1111223333345679999999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCC
Q 028056           91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERD  170 (214)
Q Consensus        91 ~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~  170 (214)
                      ++++.++++++.+.++++|++|||||...       ..+..+.+.+++++.+++|+.+++.+++.+.+.|.+.+.+    
T Consensus        79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~----  147 (256)
T PRK12748         79 PYAPNRVFYAVSERLGDPSILINNAAYST-------HTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGG----  147 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCe----
Confidence            99999999999999999999999999764       4567788889999999999999999999999998766554    


Q ss_pred             ceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          171 VAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       171 ~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        ++|++||..+..+   .++...|+++|+++++++++++
T Consensus       148 --~iv~~ss~~~~~~---~~~~~~Y~~sK~a~~~~~~~la  182 (256)
T PRK12748        148 --RIINLTSGQSLGP---MPDELAYAATKGAIEAFTKSLA  182 (256)
T ss_pred             --EEEEECCccccCC---CCCchHHHHHHHHHHHHHHHHH
Confidence              9999999877666   5678899999999999999984

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.96  E-value=2.3e-28  Score=202.30  Aligned_cols=171  Identities=23%  Similarity=0.304  Sum_probs=135.3

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ..|++++|||||+|||+++|++|+++|++  |++.+|++++++.+.+.+...  +.++..+.+|+++  ++.+.++++.+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~--Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~  126 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLN--LVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKE  126 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCC--EEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHH
Confidence            45899999999999999999999999998  999999998877655544332  2467888999985  22333444444


Q ss_pred             HcC--CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          104 KYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       104 ~~~--~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++  ++|++|||||...+     ...++.+.+.+++++.+++|+.|++.+++.++|.|.+++.|      .||++||..
T Consensus       127 ~~~~~didilVnnAG~~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g------~IV~iSS~a  195 (320)
T PLN02780        127 TIEGLDVGVLINNVGVSYP-----YARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKG------AIINIGSGA  195 (320)
T ss_pred             HhcCCCccEEEEecCcCCC-----CCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCc------EEEEEechh
Confidence            333  46799999998641     12356778889999999999999999999999999887765      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +.... +.+....|++||+++++|+++| .|+
T Consensus       196 ~~~~~-~~p~~~~Y~aSKaal~~~~~~L~~El  226 (320)
T PLN02780        196 AIVIP-SDPLYAVYAATKAYIDQFSRCLYVEY  226 (320)
T ss_pred             hccCC-CCccchHHHHHHHHHHHHHHHHHHHH
Confidence            86421 1367889999999999999999 554

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.7e-28  Score=193.66  Aligned_cols=169  Identities=22%  Similarity=0.216  Sum_probs=140.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ...+|++|||||++|||.+++++|+++|++  |++.++ +.+..+.+.+.+...+.++.+++||++|.+++.++++++.+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFD--VAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            356899999999999999999999999997  666555 34344444444444466788999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||...       ..++.+.+.+++++.+++|+.+++.+++.+.+.+.+...+      .+|+++|..+.
T Consensus        84 ~~~~iD~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~~s~~~~  150 (258)
T PRK09134         84 ALGPITLLVNNASLFE-------YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARG------LVVNMIDQRVW  150 (258)
T ss_pred             HcCCCCEEEECCcCCC-------CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------eEEEECchhhc
Confidence            8999999999999764       3456678889999999999999999999999998876544      99999887665


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      .+   .+.+..|+++|++++++++++++
T Consensus       151 ~~---~p~~~~Y~~sK~a~~~~~~~la~  175 (258)
T PRK09134        151 NL---NPDFLSYTLSKAALWTATRTLAQ  175 (258)
T ss_pred             CC---CCCchHHHHHHHHHHHHHHHHHH
Confidence            54   46667999999999999999954

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.3e-28  Score=195.12  Aligned_cols=164  Identities=20%  Similarity=0.259  Sum_probs=145.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ++++||||+||||.+++++|+++|++  |++.+|+.+.++...+.+...+.++.+++||++|+++++++++++.+.++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWR--LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999997  9999998877666555555556688899999999999999999999999999


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.+      .||++||..+..+   
T Consensus        79 d~lI~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~vsS~~~~~~---  142 (270)
T PRK05650         79 DVIVNNAGVAS-------GGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSG------RIVNIASMAGLMQ---  142 (270)
T ss_pred             CEEEECCCCCC-------CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC------EEEEECChhhcCC---
Confidence            99999999864       4567788889999999999999999999999999887655      9999999988877   


Q ss_pred             CCCcchhhhhHHHHHHHHHHhc
Q 028056          189 LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .++...|+++|+++++++++++
T Consensus       143 ~~~~~~Y~~sKaa~~~~~~~l~  164 (270)
T PRK05650        143 GPAMSSYNVAKAGVVALSETLL  164 (270)
T ss_pred             CCCchHHHHHHHHHHHHHHHHH
Confidence            6788999999999999999994

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.96  E-value=6.6e-28  Score=192.28  Aligned_cols=167  Identities=20%  Similarity=0.320  Sum_probs=141.9

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +++|+++||||+++||.++|++|+++|++  |++.. ++++..++..+.+...+.++.++++|+++++++.++++++.+.
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAK--VVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999997  65544 4444444444444444567899999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||||...       ...+.+.+.+.+++.+++|+.+++.+++.+.+.|.+.+.+      ++|++||..+..
T Consensus        82 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~  148 (247)
T PRK12935         82 FGKVDILVNNAGITR-------DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEG------RIISISSIIGQA  148 (247)
T ss_pred             cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEcchhhcC
Confidence            999999999999864       3456678889999999999999999999999999876554      999999988877


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .+++..|+++|+++++++++++
T Consensus       149 ~---~~~~~~Y~~sK~a~~~~~~~l~  171 (247)
T PRK12935        149 G---GFGQTNYSAAKAGMLGFTKSLA  171 (247)
T ss_pred             C---CCCCcchHHHHHHHHHHHHHHH
Confidence            6   4677899999999999999983

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=192.45  Aligned_cols=169  Identities=21%  Similarity=0.267  Sum_probs=147.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|++|||||+++||.+++++|+++|++  |++.+|+++..++..+.+.+.+.++.++++|++|.++++++++++.+.
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAA--VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            477899999999999999999999999997  899999987766665555555667889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHH-hcCCCCCCCCceEEEEeecCccc
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLL-KVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      ++++|++|||+|...       ..+..+.+.+++++.+++|+.+++.+++.+++.+ +..+.+      +||++||..+.
T Consensus        82 ~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~------~iv~~ss~~~~  148 (262)
T PRK13394         82 FGSVDILVSNAGIQI-------VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGG------VVIYMGSVHSH  148 (262)
T ss_pred             cCCCCEEEECCccCC-------CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCc------EEEEEcchhhc
Confidence            999999999999764       4556677888999999999999999999999999 655544      99999998777


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      .+   .+....|+++|++++++++++++
T Consensus       149 ~~---~~~~~~y~~sk~a~~~~~~~la~  173 (262)
T PRK13394        149 EA---SPLKSAYVTAKHGLLGLARVLAK  173 (262)
T ss_pred             CC---CCCCcccHHHHHHHHHHHHHHHH
Confidence            66   56778999999999999999853

>PRK06182 short chain dehydrogenase; Validated

Probab=99.96  E-value=6.9e-28  Score=195.16  Aligned_cols=160  Identities=27%  Similarity=0.320  Sum_probs=140.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++|+++||||++|||++++++|+++|++  |++.+|++++++.+.      ..++.++.+|++|+++++++++++.+.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~--V~~~~r~~~~l~~~~------~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYT--VYGAARRVDKMEDLA------SLGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH------hCCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999999997  999999876543321      12478899999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|++|||||...       ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.|      +||++||..+..+ 
T Consensus        74 ~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g------~iv~isS~~~~~~-  139 (273)
T PRK06182         74 RIDVLVNNAGYGS-------YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSG------RIINISSMGGKIY-  139 (273)
T ss_pred             CCCEEEECCCcCC-------CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcchhhcCC-
Confidence            9999999999864       5667788999999999999999999999999999887665      9999999887665 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .+....|+++|+++++|+++++
T Consensus       140 --~~~~~~Y~~sKaa~~~~~~~l~  161 (273)
T PRK06182        140 --TPLGAWYHATKFALEGFSDALR  161 (273)
T ss_pred             --CCCccHhHHHHHHHHHHHHHHH
Confidence              4666789999999999999885

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=8.3e-29  Score=181.44  Aligned_cols=163  Identities=23%  Similarity=0.278  Sum_probs=142.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++.|+.+++||+..|||++++..|++.|++  ||.+.|+++.+..+.+   +-+..++.++.|+++++.+.+.+...  
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~--ViAvaR~~a~L~sLV~---e~p~~I~Pi~~Dls~wea~~~~l~~v--   75 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQ--VIAVARNEANLLSLVK---ETPSLIIPIVGDLSAWEALFKLLVPV--   75 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCE--EEEEecCHHHHHHHHh---hCCcceeeeEecccHHHHHHHhhccc--
Confidence            5688999999999999999999999999998  9999999987555433   33556889999999988776665544  


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                        +++|.+|||||+.-       ..++.+.+.+.+++.|++|+.+.+.+.|...+.+..+...     |.|+|+||.++.
T Consensus        76 --~pidgLVNNAgvA~-------~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~-----GaIVNvSSqas~  141 (245)
T KOG1207|consen   76 --FPIDGLVNNAGVAT-------NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIK-----GAIVNVSSQASI  141 (245)
T ss_pred             --Cchhhhhccchhhh-------cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCC-----ceEEEecchhcc
Confidence              78999999999974       6789999999999999999999999999988877666533     599999999999


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ++   ..+++.||++|+|++++|+.||
T Consensus       142 R~---~~nHtvYcatKaALDmlTk~lA  165 (245)
T KOG1207|consen  142 RP---LDNHTVYCATKAALDMLTKCLA  165 (245)
T ss_pred             cc---cCCceEEeecHHHHHHHHHHHH
Confidence            98   7999999999999999999995

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.2e-27  Score=191.00  Aligned_cols=169  Identities=25%  Similarity=0.373  Sum_probs=147.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++++++||||+|+||.+++++|+++|++  |++++|+++..+.+...+.. +.++.++.||++|++++.++++++.+
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGAR--VVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALE   77 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  99999998765554443333 45688999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||+|...      ...++.+.+.+.+++.+++|+.+++.+++.+.++|++++.+      .||++||..+.
T Consensus        78 ~~~~~d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~  145 (251)
T PRK07231         78 RFGSVDILVNNAGTTH------RNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGG------AIVNVASTAGL  145 (251)
T ss_pred             HhCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------EEEEEcChhhc
Confidence            9999999999999764      24557788899999999999999999999999999876654      99999999887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+.+|++++.+++.++
T Consensus       146 ~~---~~~~~~y~~sk~~~~~~~~~~a  169 (251)
T PRK07231        146 RP---RPGLGWYNASKGAVITLTKALA  169 (251)
T ss_pred             CC---CCCchHHHHHHHHHHHHHHHHH
Confidence            77   5778899999999999999984

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-27  Score=195.01  Aligned_cols=168  Identities=20%  Similarity=0.262  Sum_probs=144.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++++|++|||||+++||.+++++|+++|++  |++++|+.+. .+...+.+...+.++.++.||++|.++++++++++.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~--V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~  119 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGAD--IAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETV  119 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999997  8899887643 333444444445678899999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||||...      +..++.+.+.++|.+.+++|+.+++.+++++.+.|+..  +      +||++||..+
T Consensus       120 ~~~~~iD~lI~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~--g------~iV~isS~~~  185 (290)
T PRK06701        120 RELGRLDILVNNAAFQY------PQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG--S------AIINTGSITG  185 (290)
T ss_pred             HHcCCCCEEEECCcccC------CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC--C------eEEEEecccc
Confidence            99999999999999754      23456778889999999999999999999999998643  2      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|+++++++++++
T Consensus       186 ~~~---~~~~~~Y~~sK~a~~~l~~~la  210 (290)
T PRK06701        186 YEG---NETLIDYSATKGAIHAFTRSLA  210 (290)
T ss_pred             cCC---CCCcchhHHHHHHHHHHHHHHH
Confidence            776   4677899999999999999994

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.95  E-value=9.6e-28  Score=193.29  Aligned_cols=167  Identities=29%  Similarity=0.402  Sum_probs=145.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++++++||||+++||.+++++|+++|++  |++++|+++..+.....+ ..+.++.++++|++|+++++++++.+.+
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~   77 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGAR--LLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE   77 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh
Confidence            4578999999999999999999999999997  999999877655544333 3456789999999999999999999876


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                       ++++|++|||||...       ..++.+.+.+++++.+++|+.|++.+++.+.++|.+++.+      .|++++|..+.
T Consensus        78 -~~~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~isS~~~~  143 (263)
T PRK09072         78 -MGGINVLINNAGVNH-------FALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSA------MVVNVGSTFGS  143 (263)
T ss_pred             -cCCCCEEEECCCCCC-------ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC------EEEEecChhhC
Confidence             789999999999764       4566788899999999999999999999999999877655      89999999887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++.+++++++
T Consensus       144 ~~---~~~~~~Y~~sK~a~~~~~~~l~  167 (263)
T PRK09072        144 IG---YPGYASYCASKFALRGFSEALR  167 (263)
T ss_pred             cC---CCCccHHHHHHHHHHHHHHHHH
Confidence            77   5778899999999999999994

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.2e-27  Score=194.33  Aligned_cols=163  Identities=23%  Similarity=0.349  Sum_probs=142.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+|+++||||+||||.+++++|+++|++  |++++|++++.+.+   ....+.++.++.+|++|++++.++++++.+.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~l---~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHR--VVGTVRSEAARADF---EALHPDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCE--EEEEeCCHHHHHHH---HhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999997  99999987654332   222345788899999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|++|||||...       ..+..+.+.+++.+.+++|+.|++.+++.++|+|++++.+      +||++||..+..+ 
T Consensus        78 ~~d~vv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~iSS~~~~~~-  143 (277)
T PRK06180         78 PIDVLVNNAGYGH-------EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRG------HIVNITSMGGLIT-  143 (277)
T ss_pred             CCCEEEECCCccC-------CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCC------EEEEEecccccCC-
Confidence            9999999999864       4566788889999999999999999999999999887655      9999999988877 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .+++..|+++|+++++++++++
T Consensus       144 --~~~~~~Y~~sK~a~~~~~~~la  165 (277)
T PRK06180        144 --MPGIGYYCGSKFALEGISESLA  165 (277)
T ss_pred             --CCCcchhHHHHHHHHHHHHHHH
Confidence              5788999999999999999984

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-27  Score=191.16  Aligned_cols=167  Identities=26%  Similarity=0.374  Sum_probs=148.2

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +++|+++||||+++||.+++++|+++|++  |++++|+++..+...+.+...+.++.++.||++|++++.++++++.+.+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAK--VVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999997  9999999877666555554456688999999999999999999999999


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|++|||+|...       ..+..+.+.+.+++.+++|+.+++.+++.+++.|++++.+      +||++||..+..+
T Consensus        80 ~~~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~iss~~~~~~  146 (258)
T PRK12429         80 GGVDILVNNAGIQH-------VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGG------RIINMASVHGLVG  146 (258)
T ss_pred             CCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCe------EEEEEcchhhccC
Confidence            99999999999764       4556778888999999999999999999999999887655      9999999988877


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                         .++...|+++|++++++++.++
T Consensus       147 ---~~~~~~y~~~k~a~~~~~~~l~  168 (258)
T PRK12429        147 ---SAGKAAYVSAKHGLIGLTKVVA  168 (258)
T ss_pred             ---CCCcchhHHHHHHHHHHHHHHH
Confidence               5788999999999999999984

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.1e-27  Score=189.67  Aligned_cols=169  Identities=20%  Similarity=0.228  Sum_probs=143.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||+++||.+++++|+++|++  |++++|+++..+.+.+.+...+.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGAS--VVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578899999999999999999999999997  99999987665555444444445678899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||.....    ...++.+.+.+++++.+++|+.+++.+++++.+++.+.+.+      .||++||..++
T Consensus        80 ~~~~id~vi~~ag~~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~  149 (250)
T PRK07774         80 AFGGIDYLVNNAAIYGGM----KLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGG------AIVNQSSTAAW  149 (250)
T ss_pred             HhCCCCEEEECCCCcCCC----CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc------EEEEEeccccc
Confidence            999999999999986410    13456677889999999999999999999999999876654      99999998765


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+      ...|+++|+++++++++++
T Consensus       150 ~~------~~~Y~~sK~a~~~~~~~l~  170 (250)
T PRK07774        150 LY------SNFYGLAKVGLNGLTQQLA  170 (250)
T ss_pred             CC------ccccHHHHHHHHHHHHHHH
Confidence            43      4689999999999999994

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.1e-27  Score=191.93  Aligned_cols=158  Identities=25%  Similarity=0.383  Sum_probs=140.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++++++||||+||||.+++++|+++|++  |++.+|+++..+.        ..++++++||++|+++++++++++.+.++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~--V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYR--VFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            5689999999999999999999999997  9999998755332        23578899999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|++|||||...       ..+..+.+.+++++.+++|+.|++.+++.++|+|++++.+      +||++||..+..+ 
T Consensus        73 ~~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~~-  138 (270)
T PRK06179         73 RIDVLVNNAGVGL-------AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSG------RIINISSVLGFLP-  138 (270)
T ss_pred             CCCEEEECCCCCC-------CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------eEEEECCccccCC-
Confidence            9999999999864       4566778889999999999999999999999999887766      9999999988776 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .+....|+++|+++++++++++
T Consensus       139 --~~~~~~Y~~sK~a~~~~~~~l~  160 (270)
T PRK06179        139 --APYMALYAASKHAVEGYSESLD  160 (270)
T ss_pred             --CCCccHHHHHHHHHHHHHHHHH
Confidence              5778899999999999999983

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.9e-27  Score=191.45  Aligned_cols=168  Identities=22%  Similarity=0.269  Sum_probs=141.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|+++||||++|||.+++++|+++|++  |++++|+.. .+...+.....+.++.++.||++++++++++++++.+.
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~--Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   79 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGAN--LILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK   79 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            478899999999999999999999999997  899998864 22222223333557889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.+.+++.+.+.+      +||++||..+..
T Consensus        80 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~  146 (263)
T PRK08226         80 EGRIDILVNNAGVCR-------LGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDG------RIVMMSSVTGDM  146 (263)
T ss_pred             cCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------EEEEECcHHhcc
Confidence            999999999999864       4556777889999999999999999999999998776544      999999987643


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..  .+++..|+++|+++++++++++
T Consensus       147 ~~--~~~~~~Y~~sK~a~~~~~~~la  170 (263)
T PRK08226        147 VA--DPGETAYALTKAAIVGLTKSLA  170 (263)
T ss_pred             cC--CCCcchHHHHHHHHHHHHHHHH
Confidence            21  4677899999999999999994

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.6e-27  Score=189.53  Aligned_cols=166  Identities=20%  Similarity=0.269  Sum_probs=145.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++|+++||||+++||..++++|+++|++  |++++|+++..+++.+.+.+.+.++.++.+|++|++++.++++++.+.++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWD--LALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4589999999999999999999999997  99999988765555444444456788999999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.+.++|.+++.+      +||++||..+..+ 
T Consensus        83 ~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~~-  148 (241)
T PRK07454         83 CPDVLINNAGMAY-------TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGG------LIINVSSIAARNA-  148 (241)
T ss_pred             CCCEEEECCCccC-------CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCc------EEEEEccHHhCcC-
Confidence            9999999999764       4556777889999999999999999999999999877655      9999999988766 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .+++..|+++|++++.++++++
T Consensus       149 --~~~~~~Y~~sK~~~~~~~~~~a  170 (241)
T PRK07454        149 --FPQWGAYCVSKAALAAFTKCLA  170 (241)
T ss_pred             --CCCccHHHHHHHHHHHHHHHHH
Confidence              5778899999999999999984

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=7.9e-28  Score=196.92  Aligned_cols=172  Identities=16%  Similarity=0.279  Sum_probs=129.8

Q ss_pred             cccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCC--------CCcccccch-hhcCCC-----ceeEEEe
Q 028056           23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNP--------NGATGLLDL-KNRFPE-----RLDVLQL   86 (214)
Q Consensus        23 ~~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~--------~~~~~~~~~-~~~~~~-----~~~~~~~   86 (214)
                      ..+++||+++|||++  +|||+++|++|+++|++  |++.++.+        ...++..+. ....+.     ++..+.+
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~--Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGAT--ILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA   80 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCE--EEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence            467899999999996  99999999999999998  77766542        000011000 000111     1112234


Q ss_pred             cCCCH------------------HHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechh
Q 028056           87 DLTVE------------------STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG  148 (214)
Q Consensus        87 Dl~~~------------------~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~  148 (214)
                      |+++.                  ++++++++++.++++++|+||||||....     ...++.+.+.++|++.+++|+.|
T Consensus        81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~-----~~~~~~~~~~e~~~~~~~vNl~g  155 (299)
T PRK06300         81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPE-----ISKPLLETSRKGYLAALSTSSYS  155 (299)
T ss_pred             hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcc-----cCCChhhCCHHHHHHHHHHHhHH
Confidence            44433                  35899999999999999999999986421     13567889999999999999999


Q ss_pred             HHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCcc-hhhhhHHHHHHHHHHh-ccc
Q 028056          149 PILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH-SYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       149 ~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~-~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +++++++++|+|+++  |      +||+++|+.+..+   .+++. .|+++|+|+.+|+++| .||
T Consensus       156 ~~~l~~a~~p~m~~~--G------~ii~iss~~~~~~---~p~~~~~Y~asKaAl~~lt~~la~el  210 (299)
T PRK06300        156 FVSLLSHFGPIMNPG--G------STISLTYLASMRA---VPGYGGGMSSAKAALESDTKVLAWEA  210 (299)
T ss_pred             HHHHHHHHHHHhhcC--C------eEEEEeehhhcCc---CCCccHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999764  3      8999999988776   45554 8999999999999999 454

>TIGR02415 23BDH acetoin reductases

Probab=99.95  E-value=2.1e-27  Score=190.07  Aligned_cols=165  Identities=22%  Similarity=0.313  Sum_probs=145.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |+++||||+++||.+++++|+++|++  |++++|+.+..+...+.+...+.++.++.+|++|++++.++++++.++++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFA--VAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999997  8999998766555555555556678999999999999999999999999999


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |++|||+|...       ..++.+.+.+.+++.+++|+.+++.+++.+++.|++.+.+     +++|++||..+..+   
T Consensus        79 d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~iv~~sS~~~~~~---  143 (254)
T TIGR02415        79 DVMVNNAGVAP-------ITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHG-----GKIINAASIAGHEG---  143 (254)
T ss_pred             CEEEECCCcCC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC-----eEEEEecchhhcCC---
Confidence            99999999864       4567788999999999999999999999999999876532     49999999988887   


Q ss_pred             CCCcchhhhhHHHHHHHHHHhc
Q 028056          189 LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+.+..|+++|+++++|+++++
T Consensus       144 ~~~~~~Y~~sK~a~~~~~~~l~  165 (254)
T TIGR02415       144 NPILSAYSSTKFAVRGLTQTAA  165 (254)
T ss_pred             CCCCcchHHHHHHHHHHHHHHH
Confidence            5778999999999999999983

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=2e-27  Score=190.90  Aligned_cols=174  Identities=21%  Similarity=0.266  Sum_probs=146.2

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++++|++|||||+++||.++|++|+++|++  |++++|+.++.+...+.+...+.++.+++||++|+++++++++++
T Consensus         6 ~~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~   83 (259)
T PRK08213          6 ELFDLSGKTALVTGGSRGLGLQIAEALGEAGAR--VVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEET   83 (259)
T ss_pred             hhhCcCCCEEEEECCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            346688999999999999999999999999997  999999876655555445445567889999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhH-HhcCCCCCCCCceEEEEeecC
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL-LKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l~~~~~~~~~~~~~iv~iss~  180 (214)
                      .+.++++|++|||+|...       ..+..+.+.+.|++.+++|+.+++.+++++.++ |.+++.+      ++|++||.
T Consensus        84 ~~~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~------~~v~~sS~  150 (259)
T PRK08213         84 LERFGHVDILVNNAGATW-------GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYG------RIINVASV  150 (259)
T ss_pred             HHHhCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCe------EEEEECCh
Confidence            999999999999999753       345567788999999999999999999999998 7665544      99999998


Q ss_pred             cccCCCCC-CCCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGDNR-LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~~~-~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+..+..+ .++...|+++|+++++++++++
T Consensus       151 ~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a  181 (259)
T PRK08213        151 AGLGGNPPEVMDTIAYNTSKGAVINFTRALA  181 (259)
T ss_pred             hhccCCCccccCcchHHHHHHHHHHHHHHHH
Confidence            77665321 1345899999999999999984

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.95  E-value=1.8e-27  Score=189.88  Aligned_cols=167  Identities=19%  Similarity=0.251  Sum_probs=146.2

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +++|++|||||+++||.+++++|+++|++  |++.+|+.+..+.+.+.+...+.++.++.+|++|.++++++++++.+.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAK--VAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999997  9999998876555544444445678999999999999999999999999


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.+.+.|++.+.+      ++|++||..+..+
T Consensus        79 ~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~ii~iss~~~~~~  145 (250)
T TIGR03206        79 GPVDVLVNNAGWDK-------FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAG------RIVNIASDAARVG  145 (250)
T ss_pred             CCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCe------EEEEECchhhccC
Confidence            99999999999753       4556778888999999999999999999999999877655      9999999988776


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                         .++...|+++|+++++++++++
T Consensus       146 ---~~~~~~Y~~sK~a~~~~~~~la  167 (250)
T TIGR03206       146 ---SSGEAVYAACKGGLVAFSKTMA  167 (250)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHH
Confidence               5778899999999999999984

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06484 short chain dehydrogenase; Validated

Probab=99.95  E-value=1.9e-27  Score=208.78  Aligned_cols=170  Identities=24%  Similarity=0.348  Sum_probs=145.4

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ..++|+++||||++|||.++|++|+++|++  |++++|+.+.++...   .+.+.++.++++|++|+++++++++++.+.
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQ--VVVADRNVERARERA---DSLGPDHHALAMDVSDEAQIREGFEQLHRE   76 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH---HHhCCceeEEEeccCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999997  999999877654432   233557788999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...+     ...++.+.+.++|++.+++|+.+++.++++++|+|++++.|     ++||++||..+..
T Consensus        77 ~g~iD~li~nag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-----~~iv~isS~~~~~  146 (520)
T PRK06484         77 FGRIDVLVNNAGVTDP-----TMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHG-----AAIVNVASGAGLV  146 (520)
T ss_pred             hCCCCEEEECCCcCCC-----CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----CeEEEECCcccCC
Confidence            9999999999997431     12456778899999999999999999999999999775433     3999999998887


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .+++..|+++|+++++|++++ .||
T Consensus       147 ~---~~~~~~Y~asKaal~~l~~~la~e~  172 (520)
T PRK06484        147 A---LPKRTAYSASKAAVISLTRSLACEW  172 (520)
T ss_pred             C---CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            7   578899999999999999998 443

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.9e-27  Score=192.84  Aligned_cols=164  Identities=26%  Similarity=0.374  Sum_probs=143.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+|+++||||+++||.+++++|+++|++  |++.+|+++.++.+.+   ..+.++.++++|++|+++++++++++.+.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDR--VVATARDTATLADLAE---KYGDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHH---hccCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999987  9999998766443322   2345688899999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|++|||||...       ..++.+.+.+++++.+++|+.+++.+++.++|.|++++.+      ++|++||..+..+ 
T Consensus        77 ~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~vsS~~~~~~-  142 (275)
T PRK08263         77 RLDIVVNNAGYGL-------FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSG------HIIQISSIGGISA-  142 (275)
T ss_pred             CCCEEEECCCCcc-------ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEEcChhhcCC-
Confidence            9999999999864       4567788899999999999999999999999999877655      9999999988877 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                        .++...|+++|+++++++++++.
T Consensus       143 --~~~~~~Y~~sKaa~~~~~~~la~  165 (275)
T PRK08263        143 --FPMSGIYHASKWALEGMSEALAQ  165 (275)
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHH
Confidence              57788999999999999999843

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.9e-27  Score=190.77  Aligned_cols=165  Identities=15%  Similarity=0.157  Sum_probs=134.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCC-cccccchhhcCCC-ceeEEEecCCCHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNG-ATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g-~~~~vi~~~r~~~~-~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++|+++||||++|||+++|++|+++| ++  |++++|+++. ++++.+.+.+.+. +++++++|++|.++++++++++.+
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~--V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPAR--VVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCe--EEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence            46899999999999999999999996 65  9999999876 5555444444333 789999999999999999999886


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                       ++++|++|||+|....      . .....+.+...+.+++|+.+++.+++.+.|.|++++.+      +||++||..+.
T Consensus        85 -~g~id~li~~ag~~~~------~-~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~------~iv~isS~~g~  150 (253)
T PRK07904         85 -GGDVDVAIVAFGLLGD------A-EELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFG------QIIAMSSVAGE  150 (253)
T ss_pred             -cCCCCEEEEeeecCCc------h-hhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCc------eEEEEechhhc
Confidence             4899999999998641      1 11112344556789999999999999999999987765      99999999876


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|++||+++.+|+++++
T Consensus       151 ~~---~~~~~~Y~~sKaa~~~~~~~l~  174 (253)
T PRK07904        151 RV---RRSNFVYGSTKAGLDGFYLGLG  174 (253)
T ss_pred             CC---CCCCcchHHHHHHHHHHHHHHH
Confidence            65   4667889999999999999983

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=2.1e-27  Score=188.59  Aligned_cols=168  Identities=21%  Similarity=0.293  Sum_probs=146.4

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++++++||||+++||.+++++|+++|++  |++++|+++..+...+.+...+.++.++++|+++++++.++++++.++
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVN--VGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999997  999999887665544444444567889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||+|...       ...+.+.+.+++++.+++|+.+++.+++.+.+++.+++.+      ++|++||..+..
T Consensus        82 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~ss~~~~~  148 (239)
T PRK07666         82 LGSIDILINNAGISK-------FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSG------DIINISSTAGQK  148 (239)
T ss_pred             cCCccEEEEcCcccc-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc------EEEEEcchhhcc
Confidence            999999999999764       3456677889999999999999999999999999877655      999999998887


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|+.+|++++.+++.++
T Consensus       149 ~---~~~~~~Y~~sK~a~~~~~~~~a  171 (239)
T PRK07666        149 G---AAVTSAYSASKFGVLGLTESLM  171 (239)
T ss_pred             C---CCCCcchHHHHHHHHHHHHHHH
Confidence            7   5677899999999999999884

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.7e-27  Score=188.35  Aligned_cols=167  Identities=24%  Similarity=0.347  Sum_probs=141.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      |++++|+++||||+++||.++|++|+++|++  +++..++.+. .+...+.+...+.++.++.+|+++.++++++++++.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFA--VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAE   78 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  7666665432 333444444456688999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||||...       ..++.+.+.+++++.+++|+.+++.+++.+.+.|...  +      +||++||..+
T Consensus        79 ~~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~------~iv~~ss~~~  143 (245)
T PRK12937         79 TAFGRIDVLVNNAGVMP-------LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG--G------RIINLSTSVI  143 (245)
T ss_pred             HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC--c------EEEEEeeccc
Confidence            99999999999999764       4566778889999999999999999999999998653  2      9999999887


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .+++..|+++|++++.++++++
T Consensus       144 ~~~---~~~~~~Y~~sK~a~~~~~~~~a  168 (245)
T PRK12937        144 ALP---LPGYGPYAASKAAVEGLVHVLA  168 (245)
T ss_pred             cCC---CCCCchhHHHHHHHHHHHHHHH
Confidence            766   5778899999999999999984

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.5e-27  Score=190.53  Aligned_cols=162  Identities=22%  Similarity=0.192  Sum_probs=141.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH-cCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK-YGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~  107 (214)
                      |++|||||++|||.+++++|+++|++  |++++|+.+.++++.+...  +.++.+++||++|.+++.++++++.+. +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWR--VGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            78999999999999999999999997  9999998876555433322  457889999999999999999998776 789


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|+||||||...       ...+.+.+.+++++.+++|+.+++.+++.+.++|+..+.+      +||++||..+..+  
T Consensus        78 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~~~~--  142 (260)
T PRK08267         78 LDVLFNNAGILR-------GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGA------RVINTSSASAIYG--  142 (260)
T ss_pred             CCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC------EEEEeCchhhCcC--
Confidence            999999999864       4556678889999999999999999999999999877655      9999999988887  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .++...|+.+|+++++++++++
T Consensus       143 -~~~~~~Y~~sKaa~~~~~~~l~  164 (260)
T PRK08267        143 -QPGLAVYSATKFAVRGLTEALD  164 (260)
T ss_pred             -CCCchhhHHHHHHHHHHHHHHH
Confidence             5778899999999999999984

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.9e-27  Score=188.61  Aligned_cols=168  Identities=24%  Similarity=0.305  Sum_probs=146.9

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++|+++||||+++||.+++++|+++|++  |++++|++++.+...+.+...+.++.++++|++|+++++++++++.+.
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGAT--VAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999997  888899887666554444444567899999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||+|...       ..++.+.+.+++++.++.|+.+++.+++.+.+++.+++.+      ++|++||..+..
T Consensus        82 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~~~~  148 (250)
T PRK12939         82 LGGLDGLVNNAGITN-------SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRG------RIVNLASDTALW  148 (250)
T ss_pred             cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe------EEEEECchhhcc
Confidence            999999999999864       3566778889999999999999999999999999886655      999999988877


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .+....|+++|++++.+++.++
T Consensus       149 ~---~~~~~~y~~sK~~~~~~~~~l~  171 (250)
T PRK12939        149 G---APKLGAYVASKGAVIGMTRSLA  171 (250)
T ss_pred             C---CCCcchHHHHHHHHHHHHHHHH
Confidence            6   4667899999999999999883

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.95  E-value=2.7e-27  Score=188.78  Aligned_cols=167  Identities=28%  Similarity=0.323  Sum_probs=145.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .+..+|.|+|||+.+|+|..+|++|.++|+.  |++.+.+++..+.+.....  .++...++.|++++++|+++.+.+++
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~--V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~  100 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFR--VFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKK  100 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCE--EEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHH
Confidence            5678899999999999999999999999997  8888876665554433332  56788889999999999999999988


Q ss_pred             Hc--CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          104 KY--GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       104 ~~--~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      ..  ..+..||||||+..      ..++.+=.+.+++.+.+++|+.|++.+++.++|.+++++       |+|||++|+.
T Consensus       101 ~l~~~gLwglVNNAGi~~------~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-------GRvVnvsS~~  167 (322)
T KOG1610|consen  101 HLGEDGLWGLVNNAGISG------FLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-------GRVVNVSSVL  167 (322)
T ss_pred             hcccccceeEEecccccc------ccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-------CeEEEecccc
Confidence            64  35999999999876      467788899999999999999999999999999998876       4999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      |..+   .|...+|++||+|++.|+.+++
T Consensus       168 GR~~---~p~~g~Y~~SK~aVeaf~D~lR  193 (322)
T KOG1610|consen  168 GRVA---LPALGPYCVSKFAVEAFSDSLR  193 (322)
T ss_pred             cCcc---CcccccchhhHHHHHHHHHHHH
Confidence            9887   6888999999999999999983

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.7e-27  Score=188.80  Aligned_cols=163  Identities=25%  Similarity=0.374  Sum_probs=140.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|+++||||+++||.+++++|+++|++  |++.+|+.+..+..   ..+.+.++.+++||++|.+++.++++++.+.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~--v~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGAR--VAITGRDPASLEAA---RAELGESALVIRADAGDVAAQKALAQALAEA   77 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEecCCHHHHHHH---HHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999997  89999986543332   2233567889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||||...       ..++.+.+.+++++.+++|+.+++.+++++.|+|.+.  +      ++|+++|..+..
T Consensus        78 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~------~~i~~~S~~~~~  142 (249)
T PRK06500         78 FGRLDAVFINAGVAK-------FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP--A------SIVLNGSINAHI  142 (249)
T ss_pred             hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--C------EEEEEechHhcc
Confidence            999999999999764       4556788999999999999999999999999998643  2      888889988777


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|+++|+++++++++++
T Consensus       143 ~---~~~~~~Y~~sK~a~~~~~~~la  165 (249)
T PRK06500        143 G---MPNSSVYAASKAALLSLAKTLS  165 (249)
T ss_pred             C---CCCccHHHHHHHHHHHHHHHHH
Confidence            6   5778899999999999999984

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.2e-27  Score=197.01  Aligned_cols=171  Identities=22%  Similarity=0.267  Sum_probs=140.2

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ..++++|+++||||++|||.++|++|+++|++  |++.+|+.+..+...+.+.+.  +.++.++++|++|.+++++++++
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~--vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~   88 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAH--VVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADA   88 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHH
Confidence            35689999999999999999999999999997  999999877655433333221  34688999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|+||||||...      +   ..+.+.++++..+++|+.|++.+++.+++.|++.+.+      +||++||.
T Consensus        89 ~~~~~~~iD~li~nAg~~~------~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~------~iV~vSS~  153 (306)
T PRK06197         89 LRAAYPRIDLLINNAGVMY------T---PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGS------RVVTVSSG  153 (306)
T ss_pred             HHhhCCCCCEEEECCcccc------C---CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCC------EEEEECCH
Confidence            9999999999999999764      1   1245667889999999999999999999999876554      99999998


Q ss_pred             cccC-CC---------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSI-GD---------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~-~~---------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+.. +.         .+.++...|++||++++.|++.++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la  193 (306)
T PRK06197        154 GHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQ  193 (306)
T ss_pred             HHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHH
Confidence            6543 10         123456799999999999999984

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.1e-27  Score=187.69  Aligned_cols=171  Identities=25%  Similarity=0.322  Sum_probs=144.4

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC-CCceeEEEecCCC--HHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTV--ESTIEASAKSI  101 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~--~~~v~~~~~~~  101 (214)
                      +|++|+++||||++|||.+++++|+++|++  |++++|+++..+...+.+.+. +..+.++++|+++  .+++.++++++
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGAT--VILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCE--EEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHH
Confidence            478899999999999999999999999997  999999987766544444332 3367788999986  56889999999


Q ss_pred             HHHc-CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          102 KEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       102 ~~~~-~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      .+.+ +++|++|||||...      ...++.+.+.+++.+.+++|+.+++.+++.+.+.|.+.+.+      ++++++|.
T Consensus        81 ~~~~~~~id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~~ss~  148 (239)
T PRK08703         81 AEATQGKLDGIVHCAGYFY------ALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDA------SVIFVGES  148 (239)
T ss_pred             HHHhCCCCCEEEEeccccc------cCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCC------EEEEEecc
Confidence            8887 78999999999754      23566788899999999999999999999999999876655      99999998


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+..+   .+++..|+++|++++.+++++ .++
T Consensus       149 ~~~~~---~~~~~~Y~~sKaa~~~~~~~la~e~  178 (239)
T PRK08703        149 HGETP---KAYWGGFGASKAALNYLCKVAADEW  178 (239)
T ss_pred             ccccC---CCCccchHHhHHHHHHHHHHHHHHh
Confidence            88776   577789999999999999998 444

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.95  E-value=1.6e-27  Score=189.96  Aligned_cols=167  Identities=20%  Similarity=0.301  Sum_probs=142.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh-hcCCCceeEEEecCCCHHHHHHHHHHHHHHc-
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  105 (214)
                      |++++|||||.|||++.|++||++|.+  |++.+|++++++.+.+++ +.++..+.++.+|+++.+.+   .+.+++.. 
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~n--vvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~---ye~i~~~l~  123 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFN--VVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEV---YEKLLEKLA  123 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchh---HHHHHHHhc
Confidence            599999999999999999999999998  999999999999855544 44556888999999998874   33333332 


Q ss_pred             -CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          106 -GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       106 -~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                       .++.+||||+|....     .+..+.+.+.+++++.+++|+.++..+++.++|.|.+++.|      .|+|++|.+|..
T Consensus       124 ~~~VgILVNNvG~~~~-----~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G------~IvnigS~ag~~  192 (312)
T KOG1014|consen  124 GLDVGILVNNVGMSYD-----YPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKG------IIVNIGSFAGLI  192 (312)
T ss_pred             CCceEEEEecccccCC-----CcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCc------eEEEeccccccc
Confidence             267889999998751     24567778877999999999999999999999999998877      999999999999


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-cccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDFE  213 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~~  213 (214)
                      +   .|.++.|+++|+.++.|+++| -|++
T Consensus       193 p---~p~~s~ysasK~~v~~~S~~L~~Ey~  219 (312)
T KOG1014|consen  193 P---TPLLSVYSASKAFVDFFSRCLQKEYE  219 (312)
T ss_pred             c---ChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8   799999999999999999999 5553

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.5e-27  Score=187.60  Aligned_cols=176  Identities=23%  Similarity=0.313  Sum_probs=148.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++||||+++||.+++++|+++|++  |++++|++++++.+.+.+...+.++.++.+|+++++++.++++++.+
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAK--VVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET   82 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999997  99999988776655555444456788999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCC--CCCCceEEEEeecCc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTG--IERDVAVVANLSARV  181 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~--~~~~~~~iv~iss~~  181 (214)
                      .++++|++|||+|...       ..++.+.+.++++.++++|+.+++.+++++.+.|.++..+  .....+.+|+++|..
T Consensus        83 ~~~~~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  155 (258)
T PRK06949         83 EAGTIDILVNNSGVST-------TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVA  155 (258)
T ss_pred             hcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccc
Confidence            9999999999999754       3456677788999999999999999999999998766431  111125999999988


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      +..+   .+....|+++|++++.+++++++
T Consensus       156 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~  182 (258)
T PRK06949        156 GLRV---LPQIGLYCMSKAAVVHMTRAMAL  182 (258)
T ss_pred             ccCC---CCCccHHHHHHHHHHHHHHHHHH
Confidence            7766   56778999999999999999853

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.4e-27  Score=188.32  Aligned_cols=167  Identities=21%  Similarity=0.304  Sum_probs=134.6

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC----cccccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG----ATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      ++++++|+++||||++|||.++|++|+++|++  |++.+++...    .+...+.+...+.++.++++|+++++++++++
T Consensus         3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~--vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   80 (257)
T PRK12744          3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAK--AVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLF   80 (257)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCc--EEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHH
Confidence            35678999999999999999999999999997  5555544322    22233333334557889999999999999999


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe-
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL-  177 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i-  177 (214)
                      +++.+.++++|++|||||...       ..++.+.+.+++++.+++|+.+++.+++.+.++|++.+        .++++ 
T Consensus        81 ~~~~~~~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--------~iv~~~  145 (257)
T PRK12744         81 DDAKAAFGRPDIAINTVGKVL-------KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNG--------KIVTLV  145 (257)
T ss_pred             HHHHHhhCCCCEEEECCcccC-------CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--------CEEEEe
Confidence            999999999999999999764       35566788899999999999999999999999987543        56655 


Q ss_pred             ecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          178 SARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       178 ss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +|..+..    .+++..|+++|+|+++|+++++
T Consensus       146 ss~~~~~----~~~~~~Y~~sK~a~~~~~~~la  174 (257)
T PRK12744        146 TSLLGAF----TPFYSAYAGSKAPVEHFTRAAS  174 (257)
T ss_pred             cchhccc----CCCcccchhhHHHHHHHHHHHH
Confidence            5544432    3667899999999999999994

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.95  E-value=5.5e-27  Score=186.48  Aligned_cols=166  Identities=22%  Similarity=0.292  Sum_probs=142.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||+++||.+++++|+++|+.  |++.+|+.++++...   ...+.++.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~--v~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAI--VGLHGTRVEKLEALA---AELGERVKIFPANLSDRDEVKALGQKAEA   76 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHH---HHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999986  888888776544332   22245788899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||...       ..+..+.+.+++++.+++|+.+++.+++.+.+.+.+++.+      .+|++||..+.
T Consensus        77 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~  143 (245)
T PRK12936         77 DLEGVDILVNNAGITK-------DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYG------RIINITSVVGV  143 (245)
T ss_pred             HcCCCCEEEECCCCCC-------CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCC------EEEEECCHHhC
Confidence            9999999999999864       3456677788999999999999999999999988765554      99999999888


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|++++++++.++
T Consensus       144 ~~---~~~~~~Y~~sk~a~~~~~~~la  167 (245)
T PRK12936        144 TG---NPGQANYCASKAGMIGFSKSLA  167 (245)
T ss_pred             cC---CCCCcchHHHHHHHHHHHHHHH
Confidence            77   5778899999999999999984

>PRK09186 flagellin modification protein A; Provisional

Probab=99.95  E-value=6e-27  Score=187.62  Aligned_cols=174  Identities=22%  Similarity=0.280  Sum_probs=140.8

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh-cC-CCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RF-PERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~-~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++|+++||||++|||.++|++|+++|++  |++++|+++..+...+.+. .. ...+.+++||++|++++.++++++.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~--v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGI--VIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE   79 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999997  8999998877665444432 22 23466779999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++||||+.....    ...++.+.+.+++.+.+++|+.+++.+++.++++|++++.+      +||++||..+.
T Consensus        80 ~~~~id~vi~~A~~~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~  149 (256)
T PRK09186         80 KYGKIDGAVNCAYPRNKD----YGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGG------NLVNISSIYGV  149 (256)
T ss_pred             HcCCccEEEECCcccccc----ccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc------eEEEEechhhh
Confidence            999999999999754210    12456778889999999999999999999999999877655      99999998776


Q ss_pred             CCCC-------CCCCcchhhhhHHHHHHHHHHhcc
Q 028056          184 IGDN-------RLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       184 ~~~~-------~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      .+..       +......|+++|+++++++++++.
T Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~  184 (256)
T PRK09186        150 VAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAK  184 (256)
T ss_pred             ccccchhccccccCCcchhHHHHHHHHHHHHHHHH
Confidence            4311       111234799999999999998843

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.8e-27  Score=189.92  Aligned_cols=170  Identities=20%  Similarity=0.288  Sum_probs=144.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +++++|++||||++++||.+++++|+++|++  |++++|+.+..+...+.+...  +.++.++++|++|++++.++++++
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAA--VMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAA   80 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999997  999999876655443333322  357889999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++++|++|||+|...      +..++.+.+.+++.+.+++|+.+++.+++.+.++|.+++.+      +|+++||..
T Consensus        81 ~~~~~~~d~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~~sS~~  148 (276)
T PRK05875         81 TAWHGRLHGVVHCAGGSE------TIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGG------SFVGISSIA  148 (276)
T ss_pred             HHHcCCCCEEEECCCccc------CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEechh
Confidence            999999999999999753      23456678889999999999999999999999999876654      999999988


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   .++...|+++|+++++++++++
T Consensus       149 ~~~~---~~~~~~Y~~sK~a~~~~~~~~~  174 (276)
T PRK05875        149 ASNT---HRWFGAYGVTKSAVDHLMKLAA  174 (276)
T ss_pred             hcCC---CCCCcchHHHHHHHHHHHHHHH
Confidence            7766   4667899999999999999983

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.95  E-value=4.7e-27  Score=194.71  Aligned_cols=175  Identities=18%  Similarity=0.189  Sum_probs=139.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +.+++|+++||||++|||.+++++|+++|++  |++.+|+.++.+.+.+.+...+.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWH--VIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA   79 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999987  99999988766554444433345788999999999999999999888


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...      +..+..+.+.++++..+++|+.|++.+++.++|.|++++.+    .++||++||....
T Consensus        80 ~~~~iD~li~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~----~~riV~vsS~~~~  149 (322)
T PRK07453         80 LGKPLDALVCNAAVYM------PLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAP----DPRLVILGTVTAN  149 (322)
T ss_pred             hCCCccEEEECCcccC------CCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC----CceEEEEcccccC
Confidence            7789999999999754      12223456788999999999999999999999999876431    1399999997542


Q ss_pred             CC----C----------------------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IG----D----------------------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~----~----------------------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+    .                            .+..+...|+.||++...+++.++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la  208 (322)
T PRK07453        150 PKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELH  208 (322)
T ss_pred             ccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHH
Confidence            20    0                            012345789999999999999884

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.3e-27  Score=190.50  Aligned_cols=165  Identities=25%  Similarity=0.341  Sum_probs=140.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCC-ceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      |+++||||++|||.+++++|+++|++  |++++|+.+.++...+.+...+. .+.++++|++|+++++++++++.+.+++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~--vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAE--LFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS   78 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999997  88899987765554444433333 3556899999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.++|+|.+.+.+     ++||++||..+..+  
T Consensus        79 id~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-----g~ii~isS~~~~~~--  144 (272)
T PRK07832         79 MDVVMNIAGISA-------WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRG-----GHLVNVSSAAGLVA--  144 (272)
T ss_pred             CCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-----cEEEEEccccccCC--
Confidence            999999999764       4566788999999999999999999999999999765322     39999999988766  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .++...|+++|+++++|+++++
T Consensus       145 -~~~~~~Y~~sK~a~~~~~~~l~  166 (272)
T PRK07832        145 -LPWHAAYSASKFGLRGLSEVLR  166 (272)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHH
Confidence             5778899999999999999984

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.1e-27  Score=187.28  Aligned_cols=165  Identities=19%  Similarity=0.185  Sum_probs=140.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +|+++||||++|||.+++++|+++|++  |++.+|++++.+.+.+.+...  +.++.++++|++|++++.++++++.+.+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRD--LALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999986  999999887665544333322  3478899999999999999999999999


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|++|||||+..       ..++.+.+.+.+.+.+++|+.+++.+++.+.+.+++.+.+      +||++||..+..+
T Consensus        80 ~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~~~  146 (248)
T PRK08251         80 GGLDRVIVNAGIGK-------GARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSG------HLVLISSVSAVRG  146 (248)
T ss_pred             CCCCEEEECCCcCC-------CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------eEEEEeccccccC
Confidence            99999999999864       3445566778889999999999999999999999876655      9999999888776


Q ss_pred             CCCCC-CcchhhhhHHHHHHHHHHhc
Q 028056          186 DNRLG-GWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~~~~~-~~~~Y~asKaa~~~~~~~la  210 (214)
                         .+ ....|+++|++++++++.++
T Consensus       147 ---~~~~~~~Y~~sK~a~~~~~~~l~  169 (248)
T PRK08251        147 ---LPGVKAAYAASKAGVASLGEGLR  169 (248)
T ss_pred             ---CCCCcccHHHHHHHHHHHHHHHH
Confidence               34 36789999999999999884

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.95  E-value=1.3e-26  Score=185.30  Aligned_cols=160  Identities=23%  Similarity=0.341  Sum_probs=141.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||+++||.+++++|+++|++  |++.+|+.         ....+.++.++++|++|+++++++++++.+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~--v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAK--VIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999997  88888876         112245688999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||+|...       ..+..+.+.+++.+.+++|+.+++.+++.+.++|++++.+      +||++||..+.
T Consensus        73 ~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~~ss~~~~  139 (252)
T PRK08220         73 ETGPLDVLVNAAGILR-------MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSG------AIVTVGSNAAH  139 (252)
T ss_pred             HcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------EEEEECCchhc
Confidence            9999999999999764       4566778889999999999999999999999999876655      99999998876


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++++++++
T Consensus       140 ~~---~~~~~~Y~~sK~a~~~~~~~la  163 (252)
T PRK08220        140 VP---RIGMAAYGASKAALTSLAKCVG  163 (252)
T ss_pred             cC---CCCCchhHHHHHHHHHHHHHHH
Confidence            66   5677899999999999999984

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=1.2e-26  Score=185.47  Aligned_cols=172  Identities=19%  Similarity=0.268  Sum_probs=137.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-CCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      |.+++|+++||||++|||.++|++|+++|++  |++..++ .+..+.+   ..+.+.++.++++|++|++++.++++++.
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~--vv~~~~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGAR--VVVNYHQSEDAAEAL---ADELGDRAIALQADVTDREQVQAMFATAT   75 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCe--EEEEcCCCHHHHHHH---HHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4578899999999999999999999999997  7665543 3322222   22234578899999999999999999999


Q ss_pred             HHcCC-ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          103 EKYGS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       103 ~~~~~-vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      +.+++ +|++|||||....... ....++.+.+.+++++.+++|+.+++.+++.+.++|.+.+.+      +|++++|..
T Consensus        76 ~~~g~~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~iss~~  148 (253)
T PRK08642         76 EHFGKPITTVVNNALADFSFDG-DARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFG------RIINIGTNL  148 (253)
T ss_pred             HHhCCCCeEEEECCCccccccc-cCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCe------EEEEECCcc
Confidence            88887 9999999986421000 012456788899999999999999999999999999776554      999999976


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   ..++..|+++|+++++++++++
T Consensus       149 ~~~~---~~~~~~Y~~sK~a~~~l~~~la  174 (253)
T PRK08642        149 FQNP---VVPYHDYTTAKAALLGLTRNLA  174 (253)
T ss_pred             ccCC---CCCccchHHHHHHHHHHHHHHH
Confidence            6544   4567799999999999999983

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=2.6e-27  Score=178.75  Aligned_cols=160  Identities=23%  Similarity=0.284  Sum_probs=139.6

Q ss_pred             cCcEEEEecCC-CchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH-H
Q 028056           27 KGGVSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE-K  104 (214)
Q Consensus        27 ~~k~vlItG~s-~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~  104 (214)
                      +.|.|+|||++ ||||-+++++|++.|+.  |+.+.|..+....+..   +  ..+.....|+++++++..+..++.+ .
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~--V~AtaR~~e~M~~L~~---~--~gl~~~kLDV~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYL--VYATARRLEPMAQLAI---Q--FGLKPYKLDVSKPEEVVTVSGEVRANP   78 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeE--EEEEccccchHhhHHH---h--hCCeeEEeccCChHHHHHHHHHHhhCC
Confidence            45899999977 79999999999999997  9999998877554432   2  2366788999999999999999998 6


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      .|.+|.|+||||..+       ..|..|.+.+..++.|++|+.|.+.++|++...+.+ .+|      .|||+.|+.++.
T Consensus        79 ~Gkld~L~NNAG~~C-------~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik-aKG------tIVnvgSl~~~v  144 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQSC-------TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK-AKG------TIVNVGSLAGVV  144 (289)
T ss_pred             CCceEEEEcCCCCCc-------ccccccCCHHHHHhhhccceeeeehHHHHHHHHHHH-ccc------eEEEecceeEEe
Confidence            899999999999988       677788999999999999999999999999955544 344      999999999998


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .|..+.|++||+|++++++.|+
T Consensus       145 p---fpf~~iYsAsKAAihay~~tLr  167 (289)
T KOG1209|consen  145 P---FPFGSIYSASKAAIHAYARTLR  167 (289)
T ss_pred             c---cchhhhhhHHHHHHHHhhhhcE
Confidence            8   6899999999999999999883

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.95  E-value=1.2e-26  Score=176.67  Aligned_cols=179  Identities=39%  Similarity=0.589  Sum_probs=148.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH--cC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK--YG  106 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~--~~  106 (214)
                      |.++||||++|||..++++|.+.-.-.+++...|+++++.+..+.......+++.++.|+++.++++++++++.+-  ..
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            5699999999999999999987655447788888888853333333344779999999999999999999999986  45


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-----CCCCCCceEEEEeecCc
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-----TGIERDVAVVANLSARV  181 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~~~~~~~~iv~iss~~  181 (214)
                      .+|++|||||+..      +.....+...+.|.+.+++|..|+++++|+++|++++..     .+.......|||+||.+
T Consensus        84 GlnlLinNaGi~~------~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~  157 (249)
T KOG1611|consen   84 GLNLLINNAGIAL------SYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSA  157 (249)
T ss_pred             CceEEEeccceee------ecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccc
Confidence            7999999999985      455666777889999999999999999999999997643     23334445899999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-cccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDFE  213 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~~  213 (214)
                      +..+.....++.+|.+||+|+.+|+|++ .|++
T Consensus       158 ~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~  190 (249)
T KOG1611|consen  158 GSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLK  190 (249)
T ss_pred             cccCCCCCcchhhhHhhHHHHHHHHHHhhhhhc
Confidence            8887766778899999999999999999 6664

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.95  E-value=9.1e-27  Score=185.82  Aligned_cols=171  Identities=23%  Similarity=0.334  Sum_probs=139.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|+++||||++|||..++++|+++|++  |++. .|+++..+...+.+...+.++.+++||++++++++++++++.+.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWS--VGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            379999999999999999999999997  6554 4555555444444544556899999999999999999999999899


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|++|||||...      +..++.+.+.+++++.+++|+.+++.+++.+++.+..++.+   ..+.||++||..+..+.
T Consensus        80 ~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~ii~~sS~~~~~~~  150 (248)
T PRK06947         80 RLDALVNNAGIVA------PSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGG---RGGAIVNVSSIASRLGS  150 (248)
T ss_pred             CCCEEEECCccCC------CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCC---CCcEEEEECchhhcCCC
Confidence            9999999999864      23456788899999999999999999999999988754321   11489999998887763


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                        ...+..|+++|++++++++++++
T Consensus       151 --~~~~~~Y~~sK~~~~~~~~~la~  173 (248)
T PRK06947        151 --PNEYVDYAGSKGAVDTLTLGLAK  173 (248)
T ss_pred             --CCCCcccHhhHHHHHHHHHHHHH
Confidence              22356899999999999999943

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=5.9e-27  Score=191.75  Aligned_cols=174  Identities=28%  Similarity=0.425  Sum_probs=144.9

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc--CCCceeEEEecCCCHHHHHHH
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      .....++.+++++|||+++|||.++|++|+.+|++  |++.+|+.++.++..+.+.+  ...++.+++||++|.++|.++
T Consensus        27 ~~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~--Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~f  104 (314)
T KOG1208|consen   27 VTHGIDLSGKVALVTGATSGIGFETARELALRGAH--VVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKF  104 (314)
T ss_pred             eeccccCCCcEEEEECCCCchHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHH
Confidence            44557788999999999999999999999999986  99999999877776555543  244788899999999999999


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      .+++++.++++|++|||||+...|         ...+.|.++..|.+|..|+|.+++.++|.|+.+..+      +|||+
T Consensus       105 a~~~~~~~~~ldvLInNAGV~~~~---------~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~------RIV~v  169 (314)
T KOG1208|consen  105 AEEFKKKEGPLDVLINNAGVMAPP---------FSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPS------RIVNV  169 (314)
T ss_pred             HHHHHhcCCCccEEEeCcccccCC---------cccCccchhheehhhhHHHHHHHHHHHHHHhhCCCC------CEEEE
Confidence            999999999999999999998622         156668899999999999999999999999987644      99999


Q ss_pred             ecCcccCC--------CCC--CCCcchhhhhHHHHHHHHHHhc
Q 028056          178 SARVGSIG--------DNR--LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       178 ss~~~~~~--------~~~--~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ||..+...        ...  ......|+.||.+...+++.|+
T Consensus       170 sS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~  212 (314)
T KOG1208|consen  170 SSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELA  212 (314)
T ss_pred             cCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHH
Confidence            99876110        000  2333469999999999999983

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.95  E-value=6.3e-27  Score=187.93  Aligned_cols=169  Identities=24%  Similarity=0.258  Sum_probs=136.0

Q ss_pred             EEEEecCCCchhHHHHHHHHh----cCCCcEEEEeecCCCCcccccchhhc--CCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLE----KNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~----~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++||||++|||.++|++|++    .|++  |++.+|+++.++.+.+.+..  .+.++.++++|++|+++++++++++.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   79 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSV--LVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRE   79 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcE--EEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHh
Confidence            689999999999999999997    7886  99999998776665444443  234688999999999999999999988


Q ss_pred             HcCCc----cEEEECccccCCCCCCCCCcchhh-ccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056          104 KYGSL----NLLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus       104 ~~~~v----d~lv~nag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      .++..    |+||||||....     ......+ .+.++|++.+++|+.+++++++.++|.|++++.    ..+.||++|
T Consensus        80 ~~g~~~~~~~~lv~nAG~~~~-----~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~----~~~~iv~is  150 (256)
T TIGR01500        80 LPRPKGLQRLLLINNAGTLGD-----VSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPG----LNRTVVNIS  150 (256)
T ss_pred             ccccCCCceEEEEeCCcccCc-----cccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCC----CCCEEEEEC
Confidence            76643    699999997531     0112222 246889999999999999999999999986521    113899999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+..+   .+++..|+++|+|+++|+++| .|+
T Consensus       151 S~~~~~~---~~~~~~Y~asKaal~~l~~~la~e~  182 (256)
T TIGR01500       151 SLCAIQP---FKGWALYCAGKAARDMLFQVLALEE  182 (256)
T ss_pred             CHHhCCC---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            9988776   578889999999999999998 444

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN00015 protochlorophyllide reductase

Probab=99.95  E-value=4.3e-27  Score=193.90  Aligned_cols=167  Identities=19%  Similarity=0.264  Sum_probs=135.5

Q ss_pred             EEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 028056           32 LVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (214)
Q Consensus        32 lItG~s~giG~~~a~~l~~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~  110 (214)
                      |||||++|||.++|++|+++| ++  |++.+|+.+..+.+.+.+...+.++.++++|++|.++++++++++.+.++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWH--VVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCE--EEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 76  898999877655544443333457888999999999999999999988899999


Q ss_pred             EEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC--CCCCCCceEEEEeecCcccCCC--
Q 028056          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG--TGIERDVAVVANLSARVGSIGD--  186 (214)
Q Consensus       111 lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~~~~~~~iv~iss~~~~~~~--  186 (214)
                      ||||||+..      +..+..+.+.++|++.+++|+.|++.+++.++|.|++++  .|      +||++||..+..+.  
T Consensus        79 lInnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g------~IV~vsS~~~~~~~~~  146 (308)
T PLN00015         79 LVCNAAVYL------PTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSK------RLIIVGSITGNTNTLA  146 (308)
T ss_pred             EEECCCcCC------CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCC------EEEEEecccccccccc
Confidence            999999753      223455778899999999999999999999999998764  33      99999998764210  


Q ss_pred             ------------------------------CCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          187 ------------------------------NRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       187 ------------------------------~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                                                    .+..++..|++||+|...+++.+ ++|
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~  203 (308)
T PLN00015        147 GNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRY  203 (308)
T ss_pred             ccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhh
Confidence                                          01135678999999988888888 444

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.95  E-value=7.7e-27  Score=189.54  Aligned_cols=166  Identities=28%  Similarity=0.423  Sum_probs=143.4

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++|+++||||+|+||.+++++|+++|++  |++++|+++..+...+.....  +.++.++.+|++|++++++ ++++.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~   77 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYL--VIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLK   77 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHH
Confidence            36789999999999999999999999997  899999887665544433322  3578899999999999999 999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||+|...       .....+.+.+++++.+++|+.+++.+++.++++|++.+.+      +||++||..+.
T Consensus        78 ~~~~id~vv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~vsS~~~~  144 (280)
T PRK06914         78 EIGRIDLLVNNAGYAN-------GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSG------KIINISSISGR  144 (280)
T ss_pred             hcCCeeEEEECCcccc-------cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEECccccc
Confidence            8999999999999764       4556677889999999999999999999999999877655      99999998887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++++++++
T Consensus       145 ~~---~~~~~~Y~~sK~~~~~~~~~l~  168 (280)
T PRK06914        145 VG---FPGLSPYVSSKYALEGFSESLR  168 (280)
T ss_pred             CC---CCCCchhHHhHHHHHHHHHHHH
Confidence            77   5778899999999999999984

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=1.7e-26  Score=184.91  Aligned_cols=173  Identities=19%  Similarity=0.186  Sum_probs=143.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|+++||||+++||.+++++|+++|++  |++++|+.. ..+...+.+...+.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFD--LAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCE--EEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            379999999999999999999999997  888887643 22333333334456789999999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|++|||+|....     ...++.+.+.+.+++.+++|+.+++.+++.+.+.|.++..+.....+.||++||..+..+ 
T Consensus        80 ~id~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-  153 (256)
T PRK12745         80 RIDCLVNNAGVGVK-----VRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV-  153 (256)
T ss_pred             CCCEEEECCccCCC-----CCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC-
Confidence            99999999997531     134567888899999999999999999999999998765432223458999999988777 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .++...|+++|++++.++++++
T Consensus       154 --~~~~~~Y~~sK~a~~~~~~~l~  175 (256)
T PRK12745        154 --SPNRGEYCISKAGLSMAAQLFA  175 (256)
T ss_pred             --CCCCcccHHHHHHHHHHHHHHH
Confidence              4677899999999999999985

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.6e-26  Score=185.62  Aligned_cols=170  Identities=21%  Similarity=0.298  Sum_probs=145.8

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++|+++||||+++||..++++|+++|++ +|++++|+++..+...+.+...+.++.++.+|+++++++.++++++.+.
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAA-GLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCC-eEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478899999999999999999999999996 6889999876655444444445667888999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||+|...       ..++.+.+.+.+++.+++|+.+++.+++.+++.|.+++..     +++|++||..+..
T Consensus        82 ~g~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----g~iv~~ss~~~~~  149 (260)
T PRK06198         82 FGRLDALVNAAGLTD-------RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAE-----GTIVNIGSMSAHG  149 (260)
T ss_pred             hCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-----CEEEEECCccccc
Confidence            999999999999764       3456678899999999999999999999999999765321     3999999998876


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|+++|+++++++++++
T Consensus       150 ~---~~~~~~Y~~sK~a~~~~~~~~a  172 (260)
T PRK06198        150 G---QPFLAAYCASKGALATLTRNAA  172 (260)
T ss_pred             C---CCCcchhHHHHHHHHHHHHHHH
Confidence            6   4677899999999999999984

>PRK06196 oxidoreductase; Provisional

Probab=99.95  E-value=5.4e-27  Score=193.82  Aligned_cols=167  Identities=22%  Similarity=0.319  Sum_probs=137.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++||||++|||.++|++|+++|++  |++.+|++++.+...+.+.    ++.++++|++|.++++++++++.+
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~--Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~   95 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAH--VIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLD   95 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHh
Confidence            4678999999999999999999999999997  9999998766544332221    377899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...      +   ..+.+.+.|+..+++|+.+++.+++.++|.|++++.+      +||++||..+.
T Consensus        96 ~~~~iD~li~nAg~~~------~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~------~iV~vSS~~~~  160 (315)
T PRK06196         96 SGRRIDILINNAGVMA------C---PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGA------RVVALSSAGHR  160 (315)
T ss_pred             cCCCCCEEEECCCCCC------C---CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------eEEEECCHHhc
Confidence            8899999999999753      1   1245567899999999999999999999999877644      99999997653


Q ss_pred             CCC---------CCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          184 IGD---------NRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       184 ~~~---------~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      .+.         .+.+++..|+.||++++.+++.+++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~  197 (315)
T PRK06196        161 RSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDK  197 (315)
T ss_pred             cCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHH
Confidence            321         1234567899999999999999843

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.95  E-value=9.7e-27  Score=186.28  Aligned_cols=166  Identities=27%  Similarity=0.374  Sum_probs=139.0

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEE-eecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++++++++||||+|+||.++|++|+++|++  |++ ..|+.+..+...+.....+.++.++++|++|++++.++++++.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~--v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGAL--VAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999997  655 56776554443333333355788999999999999999999988


Q ss_pred             Hc------CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056          104 KY------GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus       104 ~~------~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      .+      +++|++|||||...       ..++.+.+.+.+++.+++|+.+++.+++.+.+.+.+.  +      ++|++
T Consensus        81 ~~~~~~~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~------~~v~~  145 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAGIGT-------QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--G------RVINI  145 (254)
T ss_pred             HhccccCCCCccEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--C------EEEEE
Confidence            76      47999999999764       4566778889999999999999999999999998654  2      89999


Q ss_pred             ecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          178 SARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       178 ss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ||..+..+   .+++..|+++|++++.++++++
T Consensus       146 sS~~~~~~---~~~~~~Y~~sK~a~~~~~~~~~  175 (254)
T PRK12746        146 SSAEVRLG---FTGSIAYGLSKGALNTMTLPLA  175 (254)
T ss_pred             CCHHhcCC---CCCCcchHhhHHHHHHHHHHHH
Confidence            99888766   5778899999999999999984

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.3e-26  Score=187.88  Aligned_cols=162  Identities=26%  Similarity=0.414  Sum_probs=139.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      .|++|||||+|+||.+++++|+++|++  |++.+|+++..+.+.+   ..+.++.++++|++|.++++++++++.+.+++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~--v~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDR--VAATVRRPDALDDLKA---RYGDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---hccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999997  8999998755443322   22457889999999999999999999998899


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|+||||||...       ..+..+.+.+++++.+++|+.+++.+++.++|+|++++.+      +||++||..+..+  
T Consensus        77 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~--  141 (276)
T PRK06482         77 IDVVVSNAGYGL-------FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGG------RIVQVSSEGGQIA--  141 (276)
T ss_pred             CCEEEECCCCCC-------CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcCcccccC--
Confidence            999999999864       4556677888999999999999999999999999877655      9999999887665  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .++...|+++|+++++++++++
T Consensus       142 -~~~~~~Y~~sK~a~~~~~~~l~  163 (276)
T PRK06482        142 -YPGFSLYHATKWGIEGFVEAVA  163 (276)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHH
Confidence             5778899999999999999985

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.4e-26  Score=184.65  Aligned_cols=169  Identities=24%  Similarity=0.360  Sum_probs=137.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +|++|||||+++||.+++++|+++|++  |++.. ++++..+...+.+...+.++.+++||++|.++++++++++.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~--vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYA--VCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCe--EEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999997  66665 443333334444444456788999999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|++|||||...      +..++.+.+.++|++.+++|+.+++.+++.++++|.++..+   ..+.||++||..+..+.
T Consensus        80 ~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~g~iv~~sS~~~~~~~  150 (248)
T PRK06123         80 RLDALVNNAGILE------AQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGG---RGGAIVNVSSMAARLGS  150 (248)
T ss_pred             CCCEEEECCCCCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC---CCeEEEEECchhhcCCC
Confidence            9999999999864      23456788899999999999999999999999998754211   11489999999887773


Q ss_pred             CCCCC-cchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGG-WHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~-~~~Y~asKaa~~~~~~~la  210 (214)
                         ++ +..|+++|+++++|+++++
T Consensus       151 ---~~~~~~Y~~sKaa~~~~~~~la  172 (248)
T PRK06123        151 ---PGEYIDYAASKGAIDTMTIGLA  172 (248)
T ss_pred             ---CCCccchHHHHHHHHHHHHHHH
Confidence               43 4679999999999999984

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.6e-26  Score=187.39  Aligned_cols=168  Identities=19%  Similarity=0.172  Sum_probs=143.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++|+++||||+++||.+++++|+++|++  |++.+|+.+..+...+.+...+.++.++.+|++|++++.++++++.+.
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFP--VALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            456789999999999999999999999997  888888876554444444444567888999999999999999999998


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||||...       ..+..+.+.+.+++.+++|+.+++.+++.+++.+.+++.+      +||++||..+..
T Consensus        85 ~~~id~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g------~iv~isS~~~~~  151 (274)
T PRK07775         85 LGEIEVLVSGAGDTY-------FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRG------DLIFVGSDVALR  151 (274)
T ss_pred             cCCCCEEEECCCcCC-------CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------eEEEECChHhcC
Confidence            899999999999764       3455667888999999999999999999999998876554      999999988777


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|+++|++++++++.++
T Consensus       152 ~---~~~~~~Y~~sK~a~~~l~~~~~  174 (274)
T PRK07775        152 Q---RPHMGAYGAAKAGLEAMVTNLQ  174 (274)
T ss_pred             C---CCCcchHHHHHHHHHHHHHHHH
Confidence            6   4667899999999999999984

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=2.5e-26  Score=183.54  Aligned_cols=167  Identities=20%  Similarity=0.257  Sum_probs=139.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-CCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ++++++++|||||+++||.+++++|+++|++  +++..++ .+......+.+.+.+.++.++.+|+++++++.++++++.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSL--VVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATI   79 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHH
Confidence            4578899999999999999999999999997  6665543 333333333344445678889999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||||...       ..+..+.+.+.+++.+++|+.+.+.+++.+.+++++.  +      ++|++||..+
T Consensus        80 ~~~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~------~iv~~sS~~~  144 (252)
T PRK06077         80 DRYGVADILVNNAGLGL-------FSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG--G------AIVNIASVAG  144 (252)
T ss_pred             HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--c------EEEEEcchhc
Confidence            99999999999999864       3455667778889999999999999999999998764  2      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|+++++++++++
T Consensus       145 ~~~---~~~~~~Y~~sK~~~~~~~~~l~  169 (252)
T PRK06077        145 IRP---AYGLSIYGAMKAAVINLTKYLA  169 (252)
T ss_pred             cCC---CCCchHHHHHHHHHHHHHHHHH
Confidence            776   6778899999999999999983

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.1e-26  Score=184.72  Aligned_cols=166  Identities=23%  Similarity=0.291  Sum_probs=138.5

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++|+++||||++|||.+++++|+++|++  |++++|+....+...+..   .  ..+++||++|+++++++++++.+.
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~   76 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGAT--VVVGDIDPEAGKAAADEV---G--GLFVPTDVTDEDAVNALFDTAAET   76 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHc---C--CcEEEeeCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999997  899999876544332222   1  257899999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||||...+     ...++.+.+.+.+++.+++|+.+++.+++.++|+|++++.+      +||++||..+..
T Consensus        77 ~~~id~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g------~iv~~sS~~~~~  145 (255)
T PRK06057         77 YGSVDIAFNNAGISPP-----EDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKG------SIINTASFVAVM  145 (255)
T ss_pred             cCCCCEEEECCCcCCC-----CCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCc------EEEEEcchhhcc
Confidence            9999999999997531     12345677889999999999999999999999999876655      999999987766


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +.  .+++..|+++|++++++++.++
T Consensus       146 g~--~~~~~~Y~~sKaal~~~~~~l~  169 (255)
T PRK06057        146 GS--ATSQISYTASKGGVLAMSRELG  169 (255)
T ss_pred             CC--CCCCcchHHHHHHHHHHHHHHH
Confidence            62  2466789999999999999884

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=2.7e-26  Score=183.19  Aligned_cols=170  Identities=22%  Similarity=0.301  Sum_probs=144.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC-CCceeEEEecCC--CHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLT--VESTIEASAKS  100 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~--~~~~v~~~~~~  100 (214)
                      ..+++|+++||||+++||.+++++|++.|++  |++++|+.+..+.+.+.+.+. ..++.++.+|++  +.+++.+++++
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~   85 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGAT--VILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADT   85 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCc--EEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHH
Confidence            4578999999999999999999999999997  999999887655544444333 346777888886  78999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|+||||||...      +..++.+.+.+.+++.+++|+.+++.+++.+.++|.+++.+      +|+++||.
T Consensus        86 ~~~~~~~id~vi~~Ag~~~------~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~------~iv~~ss~  153 (247)
T PRK08945         86 IEEQFGRLDGVLHNAGLLG------ELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAA------SLVFTSSS  153 (247)
T ss_pred             HHHHhCCCCEEEECCcccC------CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC------EEEEEccH
Confidence            9999999999999999764      23456678889999999999999999999999999887665      99999998


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+..+   .+++..|+++|++++++++.++
T Consensus       154 ~~~~~---~~~~~~Y~~sK~a~~~~~~~~~  180 (247)
T PRK08945        154 VGRQG---RANWGAYAVSKFATEGMMQVLA  180 (247)
T ss_pred             hhcCC---CCCCcccHHHHHHHHHHHHHHH
Confidence            88777   4677899999999999999883

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.94  E-value=1.7e-26  Score=186.50  Aligned_cols=172  Identities=22%  Similarity=0.279  Sum_probs=129.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCcccccchhh-cCCCceeEEEecCCCHHHH----HHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKN-RFPERLDVLQLDLTVESTI----EASAKSIK  102 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r-~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v----~~~~~~~~  102 (214)
                      ++++||||++|||++++++|+++|++  |++.+| +++.++.+.+.+. ..+.+..++.+|++|++++    +++++++.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~--V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~   79 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYR--VVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACF   79 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCe--EEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence            68999999999999999999999998  777654 4445544433332 2345677899999999855    55666666


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhcc-----------HhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVE-----------KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV  171 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~  171 (214)
                      +.++++|+||||||....       .++.+.+           .+++.+.+++|+.+++.+++.+.++|+..+.......
T Consensus        80 ~~~g~iD~lv~nAG~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~  152 (267)
T TIGR02685        80 RAFGRCDVLVNNASAFYP-------TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTN  152 (267)
T ss_pred             HccCCceEEEECCccCCC-------CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCC
Confidence            778999999999997541       1222222           2358899999999999999999999865421111223


Q ss_pred             eEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       172 ~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +.|++++|..+..+   .+++..|+++|+++++|++++ .|+
T Consensus       153 ~~iv~~~s~~~~~~---~~~~~~Y~asK~a~~~~~~~la~e~  191 (267)
T TIGR02685       153 LSIVNLCDAMTDQP---LLGFTMYTMAKHALEGLTRSAALEL  191 (267)
T ss_pred             eEEEEehhhhccCC---CcccchhHHHHHHHHHHHHHHHHHH
Confidence            58999999887665   578889999999999999998 443

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.94  E-value=2.4e-26  Score=182.78  Aligned_cols=164  Identities=24%  Similarity=0.325  Sum_probs=139.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      |+++||||+++||.++|++|+++|++  |++.+|+... .+...+.....+.++.++++|++|+++++++++++.+++++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYR--VIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCE--EEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999986  8998888541 11122222223457889999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.+++.+++.+.+      +||++||..+..+  
T Consensus        81 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~iss~~~~~~--  145 (245)
T PRK12824         81 VDILVNNAGITR-------DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYG------RIINISSVNGLKG--  145 (245)
T ss_pred             CCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCe------EEEEECChhhccC--
Confidence            999999999864       4556778899999999999999999999999999876654      9999999988766  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .++...|+++|++++++++.++
T Consensus       146 -~~~~~~Y~~sK~a~~~~~~~l~  167 (245)
T PRK12824        146 -QFGQTNYSAAKAGMIGFTKALA  167 (245)
T ss_pred             -CCCChHHHHHHHHHHHHHHHHH
Confidence             5778899999999999999984

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=3.5e-26  Score=182.52  Aligned_cols=176  Identities=23%  Similarity=0.289  Sum_probs=142.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++++++||||+++||.+++++|+++|++  |++++|++++.+...+.+...+.++.++++|++++++++++++++.+
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAK--LALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAE   78 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  89999988766555555554566788999999999999999999998


Q ss_pred             HcCCccEEEECccccCCCCC-CCCCcch-hhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          104 KYGSLNLLINASGILSIPNV-LQPETTL-NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++|++|||+|....... ..+...+ .+.+.+.+...+++|+.+++.+++.+.+.|.+...+     +.|+++||..
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~-----~~iv~~ss~~  153 (253)
T PRK08217         79 DFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSK-----GVIINISSIA  153 (253)
T ss_pred             HcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC-----eEEEEEcccc
Confidence            88999999999997541000 0011222 567888999999999999999999999999765322     3899998864


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      . .+   .++...|+++|+++++++++|+
T Consensus       154 ~-~~---~~~~~~Y~~sK~a~~~l~~~la  178 (253)
T PRK08217        154 R-AG---NMGQTNYSASKAGVAAMTVTWA  178 (253)
T ss_pred             c-cC---CCCCchhHHHHHHHHHHHHHHH
Confidence            3 34   4677899999999999999995

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.94  E-value=3e-26  Score=183.15  Aligned_cols=164  Identities=24%  Similarity=0.351  Sum_probs=140.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ++++||||+||||.+++++|+++|++  |++.+|+++.++.+.+.   .+.++.++.+|++|.++++++++++.+.++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHK--VIATGRRQERLQELKDE---LGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHH---hccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            37899999999999999999999997  99999987654443322   24578899999999999999999999999999


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |++|||+|...      ...+..+.+.+++++.+++|+.+++.+++.++++|.+.+.+      +||++||..+..+   
T Consensus        76 d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~~~~---  140 (248)
T PRK10538         76 DVLVNNAGLAL------GLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHG------HIINIGSTAGSWP---  140 (248)
T ss_pred             CEEEECCCccC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEECCcccCCC---
Confidence            99999999753      13455677889999999999999999999999999877655      9999999887766   


Q ss_pred             CCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          189 LGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .++...|+++|++++++++.+ .++
T Consensus       141 ~~~~~~Y~~sK~~~~~~~~~l~~~~  165 (248)
T PRK10538        141 YAGGNVYGATKAFVRQFSLNLRTDL  165 (248)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHh
Confidence            567789999999999999998 443

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=3.1e-26  Score=182.27  Aligned_cols=170  Identities=28%  Similarity=0.363  Sum_probs=146.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +++++|+++||||+++||.+++++|+++|++  |++. +|+++..+...+.+...+.++.++.+|++|++++.++++++.
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~--v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAK--VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIV   78 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            3578899999999999999999999999997  7777 888766555444444445678899999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.+.+.+.+++.+      .+|++||..+
T Consensus        79 ~~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~v~~sS~~~  145 (247)
T PRK05565         79 EKFGKIDILVNNAGISN-------FGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSG------VIVNISSIWG  145 (247)
T ss_pred             HHhCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEECCHhh
Confidence            99999999999999763       4566778899999999999999999999999999877654      8999999888


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      ..+   .+....|+.+|++++.+++++++
T Consensus       146 ~~~---~~~~~~y~~sK~a~~~~~~~~~~  171 (247)
T PRK05565        146 LIG---ASCEVLYSASKGAVNAFTKALAK  171 (247)
T ss_pred             ccC---CCCccHHHHHHHHHHHHHHHHHH
Confidence            877   46778999999999999999843

>PRK07069 short chain dehydrogenase; Validated

Probab=99.94  E-value=3.6e-26  Score=182.51  Aligned_cols=162  Identities=23%  Similarity=0.270  Sum_probs=138.7

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-CCCcccccchhhcCC--CceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~-~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      ++||||+++||.+++++|+++|++  |++++|+ .+.++.+.+.+....  ..+..+++|++|+++++++++++.+.+++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAK--VFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG   79 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCE--EEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            799999999999999999999997  9999988 544444444333222  23556889999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||||...       ..++.+.+.+++++.+++|+.+++.+++.+++.|++++.+      +||++||..+..+  
T Consensus        80 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~ii~~ss~~~~~~--  144 (251)
T PRK07069         80 LSVLVNNAGVGS-------FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPA------SIVNISSVAAFKA--  144 (251)
T ss_pred             ccEEEECCCcCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCc------EEEEecChhhccC--
Confidence            999999999764       4567788899999999999999999999999999877655      9999999988877  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .+++..|+++|++++.++++++
T Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la  166 (251)
T PRK07069        145 -EPDYTAYNASKAAVASLTKSIA  166 (251)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHH
Confidence             5778899999999999999984

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.6e-26  Score=186.01  Aligned_cols=157  Identities=25%  Similarity=0.318  Sum_probs=135.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |++|||||++|||.+++++|+++|++  |++++|+.+..+.+.      ..++.++.+|+++.++++++++++.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYE--VWATARKAEDVEALA------AAGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH------HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            78999999999999999999999997  999999875533221      1246788999999999999999999999999


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |++|||||...       ..+..+.+.+++++.+++|+.|++.+++.++|.|++.. +      .||++||..+..+   
T Consensus        74 d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g------~iv~isS~~~~~~---  136 (274)
T PRK05693         74 DVLINNAGYGA-------MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSR-G------LVVNIGSVSGVLV---  136 (274)
T ss_pred             CEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C------EEEEECCccccCC---
Confidence            99999999764       45667788899999999999999999999999987542 3      8999999988776   


Q ss_pred             CCCcchhhhhHHHHHHHHHHhc
Q 028056          189 LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .++...|+++|++++.++++++
T Consensus       137 ~~~~~~Y~~sK~al~~~~~~l~  158 (274)
T PRK05693        137 TPFAGAYCASKAAVHALSDALR  158 (274)
T ss_pred             CCCccHHHHHHHHHHHHHHHHH
Confidence            5778899999999999999984

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.94  E-value=4.1e-26  Score=181.95  Aligned_cols=168  Identities=26%  Similarity=0.371  Sum_probs=145.1

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|+++||||+++||.+++++|+++|++  |++++|+.++.+...+.+...+.++.++.+|++|+++++++++++.++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAE--VIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVED   80 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999997  999999976655544444444567889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc-
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS-  183 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~-  183 (214)
                      ++++|++|||+|...       ..++.+.+.+++.+.++.|+.+++.+++.+.+.|.+++.+      .+|++||..+. 
T Consensus        81 ~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~ii~~ss~~~~~  147 (251)
T PRK12826         81 FGRLDILVANAGIFP-------LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGG------RIVLTSSVAGPR  147 (251)
T ss_pred             hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEEechHhhc
Confidence            999999999998764       3556678889999999999999999999999999876554      99999998877 


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|++++++++.++
T Consensus       148 ~~---~~~~~~y~~sK~a~~~~~~~~~  171 (251)
T PRK12826        148 VG---YPGLAHYAASKAGLVGFTRALA  171 (251)
T ss_pred             cC---CCCccHHHHHHHHHHHHHHHHH
Confidence            44   4677899999999999999984

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.7e-26  Score=207.88  Aligned_cols=171  Identities=24%  Similarity=0.265  Sum_probs=146.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++||||++|||.+++++|+++|++  |++++|+++.++++.+.+...+.++.+++||++|.++++++++++.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  444 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGAT--VFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILA  444 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  99999998776665555555566899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhc--cHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKV--EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++|++|||||...       .....+.  +.+++++.+++|+.+++.+++.++|+|++++.+      +||++||..
T Consensus       445 ~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~  511 (657)
T PRK07201        445 EHGHVDYLVNNAGRSI-------RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFG------HVVNVSSIG  511 (657)
T ss_pred             hcCCCCEEEECCCCCC-------CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC------EEEEECChh
Confidence            9999999999999753       1222222  257899999999999999999999999887765      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|+++|+++++|++++ .|+
T Consensus       512 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~  540 (657)
T PRK07201        512 VQTN---APRFSAYVASKAALDAFSDVAASET  540 (657)
T ss_pred             hcCC---CCCcchHHHHHHHHHHHHHHHHHHH
Confidence            8776   577889999999999999998 443

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.94  E-value=4.4e-26  Score=180.92  Aligned_cols=164  Identities=22%  Similarity=0.320  Sum_probs=139.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      |++|||||+++||.+++++|+++|++  |++..| +++..+...+.....+.++.++.+|++|+++++++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYR--VAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999997  777777 443333333333333567889999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++.+.+.|++.+.+      .||++||..+..+  
T Consensus        79 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~iss~~~~~~--  143 (242)
T TIGR01829        79 IDVLVNNAGITR-------DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWG------RIINISSVNGQKG--  143 (242)
T ss_pred             CcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcchhhcCC--
Confidence            999999999764       3456778889999999999999999999999999887655      9999999888776  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .+++..|+++|++++.++++++
T Consensus       144 -~~~~~~y~~sk~a~~~~~~~la  165 (242)
T TIGR01829       144 -QFGQTNYSAAKAGMIGFTKALA  165 (242)
T ss_pred             -CCCcchhHHHHHHHHHHHHHHH
Confidence             5778899999999999999984

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.6e-26  Score=185.57  Aligned_cols=158  Identities=18%  Similarity=0.267  Sum_probs=128.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|+++|||+ +|||+++|++|+ +|++  |++++|++++++...+.+...+.++.+++||++|+++++++++++ +.+++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~--Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKK--VLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence            589999998 699999999996 7886  999999877665554444444567889999999999999999988 56789


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||||...              ..++|++.+++|+.+++.+++.+.|+|+++  +      .+|+++|..+..+..
T Consensus        77 id~li~nAG~~~--------------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g------~iv~isS~~~~~~~~  134 (275)
T PRK06940         77 VTGLVHTAGVSP--------------SQASPEAILKVDLYGTALVLEEFGKVIAPG--G------AGVVIASQSGHRLPA  134 (275)
T ss_pred             CCEEEECCCcCC--------------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--C------CEEEEEecccccCcc
Confidence            999999999642              125688899999999999999999999754  2      778999988765420


Q ss_pred             ------------------------C---CCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          188 ------------------------R---LGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       188 ------------------------~---~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                                              +   .+++..|++||+|+.++++++ .|+
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~  187 (275)
T PRK06940        135 LTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKW  187 (275)
T ss_pred             cchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHH
Confidence                                    0   024678999999999999998 444

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.94  E-value=8.1e-26  Score=179.49  Aligned_cols=168  Identities=27%  Similarity=0.364  Sum_probs=146.8

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|+++||||+++||..++++|+++|+.  |++++|+++..+...+.+...+.++.++.+|++|++++.++++++.+.
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAK--VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            567789999999999999999999999997  999999987766555555555678899999999999999999999988


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++||++|...       ..+..+.+.+++.+.++.|+.+.+.+++.+.+++.+.+.+      +||++||..+..
T Consensus        80 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~------~ii~~ss~~~~~  146 (246)
T PRK05653         80 FGALDILVNNAGITR-------DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYG------RIVNISSVSGVT  146 (246)
T ss_pred             hCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEECcHHhcc
Confidence            899999999999764       4556678889999999999999999999999999776655      999999988777


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|+.+|++++.++++++
T Consensus       147 ~---~~~~~~y~~sk~~~~~~~~~l~  169 (246)
T PRK05653        147 G---NPGQTNYSAAKAGVIGFTKALA  169 (246)
T ss_pred             C---CCCCcHhHhHHHHHHHHHHHHH
Confidence            6   4667899999999999999984

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.94  E-value=8.6e-26  Score=181.76  Aligned_cols=164  Identities=23%  Similarity=0.322  Sum_probs=141.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +++++||||+|+||.+++++|+++|++  |++++|++++.+.+.+.+...+.++.++.+|++|+++++++++++.+.+++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQ--LVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999987  999999876655554444445667889999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhc-cHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKV-EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      +|++|||+|...       ..+..+. +.+++.+.+++|+.+++.+++.+.++|.+.. +      ++|++||..+..+ 
T Consensus        79 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~------~iv~~sS~~~~~~-  143 (263)
T PRK06181         79 IDILVNNAGITM-------WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR-G------QIVVVSSLAGLTG-  143 (263)
T ss_pred             CCEEEECCCccc-------ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C------EEEEEecccccCC-
Confidence            999999999764       3455666 8889999999999999999999999987543 3      9999999888776 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .++...|+++|+++++++++++
T Consensus       144 --~~~~~~Y~~sK~~~~~~~~~l~  165 (263)
T PRK06181        144 --VPTRSGYAASKHALHGFFDSLR  165 (263)
T ss_pred             --CCCccHHHHHHHHHHHHHHHHH
Confidence              5677899999999999999884

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.1e-25  Score=178.36  Aligned_cols=166  Identities=28%  Similarity=0.386  Sum_probs=141.4

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+.+++++||||+|+||.+++++|+++|++  |++++|++++.+.+.+.+.+. .+++++++|+++.+++.++++++.+.
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~--V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYK--VAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCE--EEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999997  999999886655544444332 56889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+++++++.+.+ +.+      .+|++||..+..
T Consensus        80 ~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~------~iv~~ss~~~~~  145 (237)
T PRK07326         80 FGGLDVLIANAGVGH-------FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-GGG------YIINISSLAGTN  145 (237)
T ss_pred             cCCCCEEEECCCCCC-------CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-CCe------EEEEECChhhcc
Confidence            999999999998764       455677888999999999999999999999999843 333      999999988766


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|+++|++++++++.++
T Consensus       146 ~---~~~~~~y~~sk~a~~~~~~~~~  168 (237)
T PRK07326        146 F---FAGGAAYNASKFGLVGFSEAAM  168 (237)
T ss_pred             C---CCCCchHHHHHHHHHHHHHHHH
Confidence            5   5667899999999999999983

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.94  E-value=5.7e-26  Score=204.23  Aligned_cols=171  Identities=22%  Similarity=0.303  Sum_probs=146.2

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-CC-CceeEEEecCCCHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FP-ERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ..++++|++|||||++|||++++++|+++|++  |++.+|+.+.++...+.+.. .+ .++..++||++|++++.+++++
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~--Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~  486 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAH--VVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD  486 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence            35688999999999999999999999999997  99999987665544333322 12 3677899999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|++|||||...       ..++.+.+.++|+..+++|+.+.+.+++.+++.|++++.+     ++||++||.
T Consensus       487 i~~~~g~iDilV~nAG~~~-------~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~-----g~IV~iSS~  554 (676)
T TIGR02632       487 VALAYGGVDIVVNNAGIAT-------SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLG-----GNIVFIASK  554 (676)
T ss_pred             HHHhcCCCcEEEECCCCCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEEeCh
Confidence            9999999999999999764       4556778899999999999999999999999999876532     499999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+..+   .++...|+++|+++++++++++
T Consensus       555 ~a~~~---~~~~~aY~aSKaA~~~l~r~lA  581 (676)
T TIGR02632       555 NAVYA---GKNASAYSAAKAAEAHLARCLA  581 (676)
T ss_pred             hhcCC---CCCCHHHHHHHHHHHHHHHHHH
Confidence            88777   5778999999999999999984

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.94  E-value=9.5e-26  Score=178.99  Aligned_cols=162  Identities=20%  Similarity=0.242  Sum_probs=135.6

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      ++||||++|||.++|++|+++|++  |+++++.. +..+...+.+.+.+.++.++++|++|++++.++++++.+.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFE--ICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            589999999999999999999998  77776543 334444444545566899999999999999999999999899999


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhh-HHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      ++|||+|...       ..++.+.+.++|++.+++|+.+++.+++.+++ .+++++.+      +||++||..+..+   
T Consensus        79 ~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~------~iv~vsS~~~~~~---  142 (239)
T TIGR01831        79 GVVLNAGITR-------DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGG------RIITLASVSGVMG---  142 (239)
T ss_pred             EEEECCCCCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCe------EEEEEcchhhccC---
Confidence            9999999864       34566788899999999999999999998754 44444444      9999999988887   


Q ss_pred             CCCcchhhhhHHHHHHHHHHhc
Q 028056          189 LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+++..|+++|+++++++++++
T Consensus       143 ~~~~~~Y~~sK~a~~~~~~~la  164 (239)
T TIGR01831       143 NRGQVNYSAAKAGLIGATKALA  164 (239)
T ss_pred             CCCCcchHHHHHHHHHHHHHHH
Confidence            5778899999999999999984

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.94  E-value=2.2e-25  Score=177.15  Aligned_cols=169  Identities=24%  Similarity=0.363  Sum_probs=142.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +++++|+++||||+|+||.+++++|+++|++  |++..|+... .+...+.+...+.++.++.+|+++++++.++++++.
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGAN--VVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAK   78 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4578899999999999999999999999997  7777776543 333334444445678899999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||+|...       ..+..+.+.+.+++.+++|+.+++.+.+.+.+.+.+.+.+      +++++||..+
T Consensus        79 ~~~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~v~iss~~~  145 (248)
T PRK05557         79 AEFGGVDILVNNAGITR-------DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSG------RIINISSVVG  145 (248)
T ss_pred             HHcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe------EEEEEccccc
Confidence            99999999999999764       3455677888999999999999999999999998876544      8999999877


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|++++++++.++
T Consensus       146 ~~~---~~~~~~y~~sk~a~~~~~~~~a  170 (248)
T PRK05557        146 LMG---NPGQANYAASKAGVIGFTKSLA  170 (248)
T ss_pred             CcC---CCCCchhHHHHHHHHHHHHHHH
Confidence            776   4677899999999999999884

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.8e-25  Score=178.00  Aligned_cols=169  Identities=22%  Similarity=0.265  Sum_probs=140.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC----cccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG----ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .+++++++||||+++||.++|++|+++|++  |+++++....    .+.+.+.....+.++.++.+|++|.+++++++++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGAD--VIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDA   80 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            367899999999999999999999999998  7776654322    2223333344456788999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHh-hHHhcCCCCCCCCceEEEEeec
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMS-PLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      +.+.++++|++|||+|...       ..++.+.+.+++.+.+++|+.+++.+++.+. +.+++.+.+      ++|++||
T Consensus        81 ~~~~~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~------~iv~~sS  147 (249)
T PRK12827         81 GVEEFGRLDILVNNAGIAT-------DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGG------RIVNIAS  147 (249)
T ss_pred             HHHHhCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCe------EEEEECC
Confidence            9998899999999999864       4566778889999999999999999999999 566655444      8999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      ..+..+   .++...|+.+|++++.+++.+++
T Consensus       148 ~~~~~~---~~~~~~y~~sK~a~~~~~~~l~~  176 (249)
T PRK12827        148 VAGVRG---NRGQVNYAASKAGLIGLTKTLAN  176 (249)
T ss_pred             chhcCC---CCCCchhHHHHHHHHHHHHHHHH
Confidence            988877   46778999999999999999843

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.93  E-value=2.3e-25  Score=178.05  Aligned_cols=164  Identities=28%  Similarity=0.409  Sum_probs=137.5

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC--cccccchhhcCC-CceeEEEecCCC-HHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNRFP-ERLDVLQLDLTV-ESTIEASAKS  100 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~Dl~~-~~~v~~~~~~  100 (214)
                      .+++|+++||||++|||.++|++|+++|+.  |++..++.+.  .+.+.+.....+ ..+.+..+|+++ .++++.+++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~   79 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGAR--VVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAA   79 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCe--EEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHH
Confidence            578899999999999999999999999997  7777777654  222222222112 367788899998 9999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCC-cchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPE-TTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      +.+.+|++|++|||||...       . .++.+.+.++|++.+++|+.+.+.+++.+.|.++++         +|||+||
T Consensus        80 ~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---------~Iv~isS  143 (251)
T COG1028          80 AEEEFGRIDILVNNAGIAG-------PDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---------RIVNISS  143 (251)
T ss_pred             HHHHcCCCCEEEECCCCCC-------CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---------eEEEECC
Confidence            9999999999999999874       3 477888889999999999999999999888887721         9999999


Q ss_pred             CcccCCCCCCCC-cchhhhhHHHHHHHHHHhc
Q 028056          180 RVGSIGDNRLGG-WHSYRASKAALNQCKILAM  210 (214)
Q Consensus       180 ~~~~~~~~~~~~-~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+. .   .++ +..|++||+|+.+|+++++
T Consensus       144 ~~~~-~---~~~~~~~Y~~sK~al~~~~~~l~  171 (251)
T COG1028         144 VAGL-G---GPPGQAAYAASKAALIGLTKALA  171 (251)
T ss_pred             chhc-C---CCCCcchHHHHHHHHHHHHHHHH
Confidence            9988 6   345 5899999999999999996

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=1.7e-25  Score=177.08  Aligned_cols=155  Identities=23%  Similarity=0.333  Sum_probs=130.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++|+++||||+++||.+++++|+++|++  |++.+|+....         ...++.++.+|++++      ++++.+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~--v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~   63 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQ--VYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFD   63 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCE--EEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHH
Confidence            4588999999999999999999999999997  88888875431         124578899999987      455555


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||+|...      ...++.+.+.+++++.+++|+.+++.+++.+++.+++++.+      +||++||..+.
T Consensus        64 ~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~  131 (235)
T PRK06550         64 WVPSVDILCNTAGILD------DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSG------IIINMCSIASF  131 (235)
T ss_pred             hhCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcChhhc
Confidence            6689999999999753      12456778899999999999999999999999999877655      99999999888


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++++++++
T Consensus       132 ~~---~~~~~~Y~~sK~a~~~~~~~la  155 (235)
T PRK06550        132 VA---GGGGAAYTASKHALAGFTKQLA  155 (235)
T ss_pred             cC---CCCCcccHHHHHHHHHHHHHHH
Confidence            76   5778899999999999999984

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.4e-25  Score=177.01  Aligned_cols=164  Identities=26%  Similarity=0.390  Sum_probs=135.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC-
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS-  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~-  107 (214)
                      |+++||||++|||+++|++|+++|++  |++++|++.+  .+.+.....+.+++++++|++|.++++++++++.+.++. 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~--V~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   77 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTH--VISISRTENK--ELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED   77 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCE--EEEEeCCchH--HHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence            68999999999999999999999997  8888987632  122222233557889999999999999999999876653 


Q ss_pred             -cc--EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          108 -LN--LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       108 -vd--~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                       ++  ++|||+|...      +..++.+.+.+++.+.+++|+.+++.+++.+++++++.+.+     ++||++||..+..
T Consensus        78 ~~~~~~~v~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~iv~~sS~~~~~  146 (251)
T PRK06924         78 NVSSIHLINNAGMVA------PIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVD-----KRVINISSGAAKN  146 (251)
T ss_pred             cCCceEEEEcceecc------cCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCC-----ceEEEecchhhcC
Confidence             22  8999999764      34567788999999999999999999999999999875321     3899999988766


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|+++|++++++++.++
T Consensus       147 ~---~~~~~~Y~~sKaa~~~~~~~la  169 (251)
T PRK06924        147 P---YFGWSAYCSSKAGLDMFTQTVA  169 (251)
T ss_pred             C---CCCcHHHhHHHHHHHHHHHHHH
Confidence            6   6778999999999999999984

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.6e-25  Score=178.27  Aligned_cols=161  Identities=19%  Similarity=0.240  Sum_probs=136.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh-cCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      |+++||||++|||.+++++|+++|++  |++++|+++..+...+.+. ..+.++.+++||++++++++++++++.+   .
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~   76 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGAR--LYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---L   76 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCE--EEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---c
Confidence            68999999999999999999999997  9999998876554433332 2245789999999999999999998764   4


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||+|...       ..+..+.+.+++.+.+++|+.+++.+++.+.|+|.+++.+      .++++||..+..+  
T Consensus        77 ~d~vv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~--  141 (243)
T PRK07102         77 PDIVLIAVGTLG-------DQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSG------TIVGISSVAGDRG--  141 (243)
T ss_pred             CCEEEECCcCCC-------CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCC------EEEEEecccccCC--
Confidence            699999999764       3456677889999999999999999999999999877665      9999999988776  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .++...|+++|+++++++++++
T Consensus       142 -~~~~~~Y~~sK~a~~~~~~~l~  163 (243)
T PRK07102        142 -RASNYVYGSAKAALTAFLSGLR  163 (243)
T ss_pred             -CCCCcccHHHHHHHHHHHHHHH
Confidence             4677899999999999999983

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.93  E-value=6.4e-25  Score=174.78  Aligned_cols=161  Identities=25%  Similarity=0.370  Sum_probs=134.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHH-HHHHc--
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS-IKEKY--  105 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-~~~~~--  105 (214)
                      .+++||||+||||.+++++|+++|++  |++++|+....  .   ....+.++.++++|++|++++++++++ +.+.+  
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~--v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIA--VLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCE--EEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            37999999999999999999999997  88888876531  1   122345788999999999999998877 55544  


Q ss_pred             -CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          106 -GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       106 -~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                       +++|++|||+|...      +..+..+.+.+++++.+++|+.+++.+++.+.+.|.+++.+      +||++||..+..
T Consensus        75 ~~~~~~~v~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS~~~~~  142 (243)
T PRK07023         75 GASRVLLINNAGTVE------PIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAER------RILHISSGAARN  142 (243)
T ss_pred             CCCceEEEEcCcccC------CCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCC------EEEEEeChhhcC
Confidence             47999999999764      23556677889999999999999999999999999876555      999999998877


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      +   .+++..|+++|++++++++.++.
T Consensus       143 ~---~~~~~~Y~~sK~a~~~~~~~~~~  166 (243)
T PRK07023        143 A---YAGWSVYCATKAALDHHARAVAL  166 (243)
T ss_pred             C---CCCchHHHHHHHHHHHHHHHHHh
Confidence            6   67889999999999999998853

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.5e-25  Score=175.25  Aligned_cols=168  Identities=20%  Similarity=0.253  Sum_probs=142.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|++|||||+|+||.+++++|+++|++  |++++|++++.++..+...  ...+..+.+|++|.++++++++++.+
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGAR--VALIGRGAAPLSQTLPGVP--ADALRIGGIDLVDPQAARRAVDEVNR   78 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCe--EEEEeCChHhHHHHHHHHh--hcCceEEEeecCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999997  9999998866444322222  23466788999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++||++|...       .....+.+.+.+++.+++|+.+++.+++.+.+.+.+++.+      ++|++||..+.
T Consensus        79 ~~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~  145 (239)
T PRK12828         79 QFGRLDALVNIAGAFV-------WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGG------RIVNIGAGAAL  145 (239)
T ss_pred             HhCCcCEEEECCcccC-------cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCC------EEEEECchHhc
Confidence            9999999999999764       3455677889999999999999999999999999876655      99999998877


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      .+   .++...|+++|++++.+++.+++
T Consensus       146 ~~---~~~~~~y~~sk~a~~~~~~~~a~  170 (239)
T PRK12828        146 KA---GPGMGAYAAAKAGVARLTEALAA  170 (239)
T ss_pred             cC---CCCcchhHHHHHHHHHHHHHHHH
Confidence            66   46778999999999999998843

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.93  E-value=2.1e-25  Score=178.33  Aligned_cols=165  Identities=22%  Similarity=0.279  Sum_probs=142.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|++|||||+|+||.+++++|+++|++  |++++|+.+..+.+.+.+...+.++.++.+|++|++++.++++++.+.+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGAN--VVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999997  999999877665555555444567889999999999999999999998899


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||++...       ..+..+.+++++++.+++|+.+++.+++.+.+.|++.+.+      ++|++||..+..+  
T Consensus        79 ~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~------~~v~~ss~~~~~~--  143 (255)
T TIGR01963        79 LDILVNNAGIQH-------VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWG------RIINIASAHGLVA--  143 (255)
T ss_pred             CCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCe------EEEEEcchhhcCC--
Confidence            999999999764       3445567788899999999999999999999999876654      9999999887766  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .+.+..|+.+|++++.+++.++
T Consensus       144 -~~~~~~y~~sk~a~~~~~~~~~  165 (255)
T TIGR01963       144 -SPFKSAYVAAKHGLIGLTKVLA  165 (255)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHH
Confidence             5778899999999999999884

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.93  E-value=3.4e-26  Score=182.15  Aligned_cols=160  Identities=31%  Similarity=0.483  Sum_probs=137.3

Q ss_pred             cCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-CCccE
Q 028056           35 GAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-GSLNL  110 (214)
Q Consensus        35 G~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~vd~  110 (214)
                      |++  +|||+++|++|+++|++  |++++|+.++++. +.++..+.+.+  +++||++++++++++++++.+.+ +++|+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~--V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~   76 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGAN--VILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDI   76 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEE--EEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred             CCCCCCChHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence            566  99999999999999998  9999999987544 45555555544  59999999999999999999999 99999


Q ss_pred             EEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCC
Q 028056          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLG  190 (214)
Q Consensus       111 lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~  190 (214)
                      +|||++......   ...++.+.+.++|++.+++|+.+++.++|++.|+|.+++        +||++||..+..+   .+
T Consensus        77 lV~~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------sii~iss~~~~~~---~~  142 (241)
T PF13561_consen   77 LVNNAGISPPSN---VEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGG--------SIINISSIAAQRP---MP  142 (241)
T ss_dssp             EEEEEESCTGGG---TSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEE--------EEEEEEEGGGTSB---ST
T ss_pred             EEeccccccccc---CCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--------Ccccccchhhccc---Cc
Confidence            999999864100   136778899999999999999999999999999888763        9999999988777   67


Q ss_pred             CcchhhhhHHHHHHHHHHh-ccc
Q 028056          191 GWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       191 ~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ++..|+++|+|+++++|+| .||
T Consensus       143 ~~~~y~~sKaal~~l~r~lA~el  165 (241)
T PF13561_consen  143 GYSAYSASKAALEGLTRSLAKEL  165 (241)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHh
Confidence            8889999999999999999 444

...

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.93  E-value=3.6e-25  Score=176.17  Aligned_cols=168  Identities=24%  Similarity=0.322  Sum_probs=138.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEE-eecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      |+++||||+++||.+++++|+++|++  |++ ..|+++..++....+...+.++..++||++|+++++++++++.+.+++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYT--VAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999997  654 567665544444444444567888999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||+|...      +..+..+.+.++++..+++|+.+++.+++.+++.+.+...+   ..+++|++||..+..+  
T Consensus        80 id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~~g~~v~~sS~~~~~~--  148 (247)
T PRK09730         80 LAALVNNAGILF------TQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGG---SGGAIVNVSSAASRLG--  148 (247)
T ss_pred             CCEEEECCCCCC------CCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC---CCcEEEEECchhhccC--
Confidence            999999999753      23456678889999999999999999999999998765321   1248999999888776  


Q ss_pred             CCCC-cchhhhhHHHHHHHHHHhc
Q 028056          188 RLGG-WHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~-~~~Y~asKaa~~~~~~~la  210 (214)
                       .++ +..|+++|+++++++++++
T Consensus       149 -~~~~~~~Y~~sK~~~~~~~~~l~  171 (247)
T PRK09730        149 -APGEYVDYAASKGAIDTLTTGLS  171 (247)
T ss_pred             -CCCcccchHhHHHHHHHHHHHHH
Confidence             343 4689999999999999884

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.8e-25  Score=176.86  Aligned_cols=162  Identities=22%  Similarity=0.307  Sum_probs=138.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|+++||||+++||.+++++|+++|++  |++++|+++..+.+.+.+.  +.++.++++|++|.+++.++++++.+++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~--v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDR--VLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999997  8999998876554433332  346889999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||+|...       ..++.+.+.+++.+.+++|+.+++.+++.+.+.+.+++.+      +||++||..+...  
T Consensus        78 ~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~~~--  142 (257)
T PRK07074         78 VDVLVANAGAAR-------AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRG------AVVNIGSVNGMAA--  142 (257)
T ss_pred             CCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe------EEEEEcchhhcCC--
Confidence            999999999864       3456678889999999999999999999999999876655      8999999766543  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .+...|+++|+++++++++++
T Consensus       143 --~~~~~y~~sK~a~~~~~~~~a  163 (257)
T PRK07074        143 --LGHPAYSAAKAGLIHYTKLLA  163 (257)
T ss_pred             --CCCcccHHHHHHHHHHHHHHH
Confidence              345689999999999999994

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5.6e-25  Score=176.84  Aligned_cols=170  Identities=24%  Similarity=0.324  Sum_probs=142.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ..+++|+++||||+|+||.+++++|+++|++  |++++|+++..+.+.+...+  .++.++.+|++|++++.++++++.+
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   82 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGAR--VHVCDVSEAALAATAARLPG--AKVTATVADVADPAQVERVFDTAVE   82 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHhc--CceEEEEccCCCHHHHHHHHHHHHH
Confidence            4478899999999999999999999999997  99999987655443333222  2578899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||+|...      +..+..+.+.+++.+.+++|+.+++.+++.+.+.+...+.+     +.++++||..+.
T Consensus        83 ~~~~~d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~vv~~ss~~~~  151 (264)
T PRK12829         83 RFGGLDVLVNNAGIAG------PTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHG-----GVIIALSSVAGR  151 (264)
T ss_pred             HhCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-----eEEEEecccccc
Confidence            9999999999999873      24456678889999999999999999999999988776542     289999988777


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      .+   .+++..|+.+|++++.+++.++.
T Consensus       152 ~~---~~~~~~y~~~K~a~~~~~~~l~~  176 (264)
T PRK12829        152 LG---YPGRTPYAASKWAVVGLVKSLAI  176 (264)
T ss_pred             cC---CCCCchhHHHHHHHHHHHHHHHH
Confidence            66   56778899999999999999854

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.1e-25  Score=177.52  Aligned_cols=155  Identities=24%  Similarity=0.246  Sum_probs=129.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ++++||||++|||.+++++|+++|++  |++++|+++.++++.+    ...++.+++||++|.++++++++++..   .+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQ--VIACGRNQSVLDELHT----QSANIFTLAFDVTDHPGTKAALSQLPF---IP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHH----hcCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence            78999999999999999999999997  9999998765443322    234688999999999999999887642   47


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |.+|||||...       ..+..+.+.+++++.+++|+.+++.+++.+.|+|.+.  +      .+|++||..+..+   
T Consensus        73 d~~i~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~------~iv~isS~~~~~~---  134 (240)
T PRK06101         73 ELWIFNAGDCE-------YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCG--H------RVVIVGSIASELA---  134 (240)
T ss_pred             CEEEEcCcccc-------cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--C------eEEEEechhhccC---
Confidence            99999998643       2223456788999999999999999999999998642  2      8999999888777   


Q ss_pred             CCCcchhhhhHHHHHHHHHHhc
Q 028056          189 LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .++...|+++|+++++|+++++
T Consensus       135 ~~~~~~Y~asK~a~~~~~~~l~  156 (240)
T PRK06101        135 LPRAEAYGASKAAVAYFARTLQ  156 (240)
T ss_pred             CCCCchhhHHHHHHHHHHHHHH
Confidence            5778899999999999999984

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.6e-25  Score=177.42  Aligned_cols=159  Identities=26%  Similarity=0.251  Sum_probs=135.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|++|||||+|+||.+++++|+++|++  |++++|++...+.+.+.....+.++.++.+|++|++++.++++      .+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHN--VIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CC
Confidence            579999999999999999999999997  8999998765555444444445578899999999998877653      37


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|+||||||...       ..+..+.+.+.+++.+++|+.+++.+++.+++.+.+.+.+      +||++||..+..+  
T Consensus        74 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~SS~~~~~~--  138 (257)
T PRK09291         74 VDVLLNNAGIGE-------AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKG------KVVFTSSMAGLIT--  138 (257)
T ss_pred             CCEEEECCCcCC-------CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------eEEEEcChhhccC--
Confidence            999999999864       4567788899999999999999999999999999877655      9999999888776  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .++...|+++|++++++++.++
T Consensus       139 -~~~~~~Y~~sK~a~~~~~~~l~  160 (257)
T PRK09291        139 -GPFTGAYCASKHALEAIAEAMH  160 (257)
T ss_pred             -CCCcchhHHHHHHHHHHHHHHH
Confidence             4677899999999999999884

>PRK08264 short chain dehydrogenase; Validated

Probab=99.93  E-value=1.2e-24  Score=172.51  Aligned_cols=161  Identities=30%  Similarity=0.469  Sum_probs=137.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +.+++++++||||+|+||.++|++|+++|++ .|++++|+.++.+.       .+.++.++.+|++|.+++++++++.  
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~-~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~--   71 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAA-KVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEAA--   71 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcc-cEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHhc--
Confidence            5678999999999999999999999999993 39999998765432       3457889999999999988877653  


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                        +++|++|||+|...      ...++.+.+.+++.+.+++|+.+++.+++++.+.+++.+.+      ++|++||..+.
T Consensus        72 --~~id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~v~~sS~~~~  137 (238)
T PRK08264         72 --SDVTILVNNAGIFR------TGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGG------AIVNVLSVLSW  137 (238)
T ss_pred             --CCCCEEEECCCcCC------CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcChhhc
Confidence              68999999999843      24566778899999999999999999999999999876655      99999998887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      .+   .++...|+++|++++.+++.+++
T Consensus       138 ~~---~~~~~~y~~sK~a~~~~~~~l~~  162 (238)
T PRK08264        138 VN---FPNLGTYSASKAAAWSLTQALRA  162 (238)
T ss_pred             cC---CCCchHhHHHHHHHHHHHHHHHH
Confidence            76   57788999999999999999843

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.93  E-value=1.7e-24  Score=171.44  Aligned_cols=163  Identities=37%  Similarity=0.523  Sum_probs=127.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ++++||||++|||+++|++|+++|....|++..|+...  .    .  ...++.+++||+++.++++++.    ++++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~----~--~~~~~~~~~~Dls~~~~~~~~~----~~~~~i   68 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D----F--QHDNVQWHALDVTDEAEIKQLS----EQFTQL   68 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c----c--ccCceEEEEecCCCHHHHHHHH----HhcCCC
Confidence            47999999999999999999999754346666664422  1    1  1347889999999999987754    455899


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |++|||+|....... .+..++.+.+.+.+++.+++|+.+++.+++.++|.|++++.+      +++++||..+.....+
T Consensus        69 d~li~~aG~~~~~~~-~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~------~i~~iss~~~~~~~~~  141 (235)
T PRK09009         69 DWLINCVGMLHTQDK-GPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESA------KFAVISAKVGSISDNR  141 (235)
T ss_pred             CEEEECCcccccccc-CcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCc------eEEEEeecccccccCC
Confidence            999999998742110 023456778889999999999999999999999999876554      8999998766443333


Q ss_pred             CCCcchhhhhHHHHHHHHHHhc
Q 028056          189 LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+++..|+++|+++++|+++|+
T Consensus       142 ~~~~~~Y~asK~a~~~~~~~la  163 (235)
T PRK09009        142 LGGWYSYRASKAALNMFLKTLS  163 (235)
T ss_pred             CCCcchhhhhHHHHHHHHHHHH
Confidence            5677899999999999999994

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.1e-24  Score=168.52  Aligned_cols=139  Identities=22%  Similarity=0.269  Sum_probs=122.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++||||++|||.+++++|+++ ++  |++.+|++.                 .++||++|+++++++++++    +++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~--vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~id   57 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HE--VITAGRSSG-----------------DVQVDITDPASIRALFEKV----GKVD   57 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-Cc--EEEEecCCC-----------------ceEecCCChHHHHHHHHhc----CCCC
Confidence            6999999999999999999998 65  999988753                 3689999999999888754    7899


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCC
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL  189 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~  189 (214)
                      ++|||||...       ..++.+.+.++|.+.+++|+.+++.+++.+.|+|++.  +      +|+++||..+..+   .
T Consensus        58 ~lv~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g------~iv~iss~~~~~~---~  119 (199)
T PRK07578         58 AVVSAAGKVH-------FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG--G------SFTLTSGILSDEP---I  119 (199)
T ss_pred             EEEECCCCCC-------CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--C------eEEEEcccccCCC---C
Confidence            9999999754       4567788899999999999999999999999999754  2      8999999888776   5


Q ss_pred             CCcchhhhhHHHHHHHHHHhc
Q 028056          190 GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       190 ~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ++...|+++|+++++|+++++
T Consensus       120 ~~~~~Y~~sK~a~~~~~~~la  140 (199)
T PRK07578        120 PGGASAATVNGALEGFVKAAA  140 (199)
T ss_pred             CCchHHHHHHHHHHHHHHHHH
Confidence            788999999999999999994

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=1.4e-24  Score=172.47  Aligned_cols=168  Identities=26%  Similarity=0.419  Sum_probs=141.7

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +++|++|||||+|+||.+++++|+++|++  |++..++... .+.+.+.....+.++.++.+|++|++++.++++++.+.
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGAD--VVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999997  6666665543 23344444444567899999999999999999999988


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++||++|...       ...+.+.+.+.+.+.+++|+.+++.+++.+.+++.+.+.+      ++|++||..+..
T Consensus        82 ~~~id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~i~~SS~~~~~  148 (249)
T PRK12825         82 FGRIDILVNNAGIFE-------DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGG------RIVNISSVAGLP  148 (249)
T ss_pred             cCCCCEEEECCccCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEECccccCC
Confidence            899999999999754       4556677888999999999999999999999999877655      999999998876


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      +   .++...|+.+|++++++++.+++
T Consensus       149 ~---~~~~~~y~~sK~~~~~~~~~~~~  172 (249)
T PRK12825        149 G---WPGRSNYAAAKAGLVGLTKALAR  172 (249)
T ss_pred             C---CCCchHHHHHHHHHHHHHHHHHH
Confidence            6   46778999999999999998843

>PRK12742 oxidoreductase; Provisional

Probab=99.93  E-value=8.9e-25  Score=173.11  Aligned_cols=158  Identities=20%  Similarity=0.273  Sum_probs=126.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-CCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++++|++|||||++|||.+++++|+++|++  |++..++ ++..++   +..+.  .+.++.+|++|.+++.+++++   
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~--v~~~~~~~~~~~~~---l~~~~--~~~~~~~D~~~~~~~~~~~~~---   72 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGAN--VRFTYAGSKDAAER---LAQET--GATAVQTDSADRDAVIDVVRK---   72 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEecCCCHHHHHH---HHHHh--CCeEEecCCCCHHHHHHHHHH---
Confidence            477999999999999999999999999997  7766553 332222   22221  356788999999988777653   


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                       ++++|++|||||...       ..+..+.++++|++.+++|+.+++.+++.++++|++.  +      +||++||..+.
T Consensus        73 -~~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g------~iv~isS~~~~  136 (237)
T PRK12742         73 -SGALDILVVNAGIAV-------FGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG--G------RIIIIGSVNGD  136 (237)
T ss_pred             -hCCCcEEEECCCCCC-------CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC--C------eEEEEeccccc
Confidence             478999999999764       3445677889999999999999999999999998643  2      99999998774


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..  +.++...|+++|+++++++++++
T Consensus       137 ~~--~~~~~~~Y~~sKaa~~~~~~~la  161 (237)
T PRK12742        137 RM--PVAGMAAYAASKSALQGMARGLA  161 (237)
T ss_pred             cC--CCCCCcchHHhHHHHHHHHHHHH
Confidence            32  25778899999999999999984

>PRK09135 pteridine reductase; Provisional

Probab=99.93  E-value=2e-24  Score=172.05  Aligned_cols=167  Identities=22%  Similarity=0.275  Sum_probs=136.8

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhc-CCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++++++|||||+|+||.+++++|+++|++  |++++|+... .+...+.+.. .+..+.++.+|++|++++.++++++.
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   80 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYR--VAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACV   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            356799999999999999999999999997  8888886432 3333222222 23468889999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||||...       ..+..+.+.+++++.+++|+.|++.+++++.+.+.+.+       +.++++++..+
T Consensus        81 ~~~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-------~~~~~~~~~~~  146 (249)
T PRK09135         81 AAFGRLDALVNNASSFY-------PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR-------GAIVNITDIHA  146 (249)
T ss_pred             HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC-------eEEEEEeChhh
Confidence            99999999999999764       34556677788999999999999999999999987643       38888888666


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|++++.++++++
T Consensus       147 ~~~---~~~~~~Y~~sK~~~~~~~~~l~  171 (249)
T PRK09135        147 ERP---LKGYPVYCAAKAALEMLTRSLA  171 (249)
T ss_pred             cCC---CCCchhHHHHHHHHHHHHHHHH
Confidence            554   5778899999999999999984

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=1.3e-24  Score=187.72  Aligned_cols=168  Identities=26%  Similarity=0.357  Sum_probs=139.5

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +...+++|+++||||++|||.+++++|+++|++  |+++++.... +.+.+...+.  +..++.+|++|+++++++++++
T Consensus       204 ~~~~~~g~~vlItGasggIG~~la~~l~~~Ga~--vi~~~~~~~~-~~l~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~  278 (450)
T PRK08261        204 WDRPLAGKVALVTGAARGIGAAIAEVLARDGAH--VVCLDVPAAG-EALAAVANRV--GGTALALDITAPDAPARIAEHL  278 (450)
T ss_pred             cccCCCCCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEeCCccH-HHHHHHHHHc--CCeEEEEeCCCHHHHHHHHHHH
Confidence            345578999999999999999999999999997  8888774321 2222222222  2457899999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|++|||||...       ...+.+.+.+.|+..+++|+.+++.+++.+.+.+..++.+      +||++||..
T Consensus       279 ~~~~g~id~vi~~AG~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g------~iv~~SS~~  345 (450)
T PRK08261        279 AERHGGLDIVVHNAGITR-------DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGG------RIVGVSSIS  345 (450)
T ss_pred             HHhCCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCC------EEEEECChh
Confidence            999999999999999874       4567788999999999999999999999999965444433      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   .+++..|+++|+++++|+++++
T Consensus       346 ~~~g---~~~~~~Y~asKaal~~~~~~la  371 (450)
T PRK08261        346 GIAG---NRGQTNYAASKAGVIGLVQALA  371 (450)
T ss_pred             hcCC---CCCChHHHHHHHHHHHHHHHHH
Confidence            8877   4778999999999999999984

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.5e-25  Score=172.97  Aligned_cols=154  Identities=16%  Similarity=0.148  Sum_probs=121.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++||||++|||++++++|+++|++  |++.+|+.++++...+..     ++.+++||++|+++++++++++.+   ++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~--v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id   71 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHK--VTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLD   71 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence            4899999999999999999999997  888999876544332221     356889999999999999887753   689


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCC
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL  189 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~  189 (214)
                      ++|||+|...... .....++.+ +.++|++.+++|+.++++++|.++|.|++.  |      +||+++|..       .
T Consensus        72 ~lv~~ag~~~~~~-~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--g------~Iv~isS~~-------~  134 (223)
T PRK05884         72 TIVNVPAPSWDAG-DPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRSG--G------SIISVVPEN-------P  134 (223)
T ss_pred             EEEECCCccccCC-CCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--C------eEEEEecCC-------C
Confidence            9999998532000 001113334 468999999999999999999999999643  3      999999965       1


Q ss_pred             CCcchhhhhHHHHHHHHHHhc
Q 028056          190 GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       190 ~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +.+..|+++|+|+.+|+++++
T Consensus       135 ~~~~~Y~asKaal~~~~~~la  155 (223)
T PRK05884        135 PAGSAEAAIKAALSNWTAGQA  155 (223)
T ss_pred             CCccccHHHHHHHHHHHHHHH
Confidence            345789999999999999994

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.1e-24  Score=169.10  Aligned_cols=161  Identities=27%  Similarity=0.406  Sum_probs=132.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |+++||||+++||.+++++|+++|++  |++++|+++..+.+.+     ..++.++.+|++|+++++++++++.+  +++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~--~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQ--VTATVRGPQQDTALQA-----LPGVHIEKLDMNDPASLDQLLQRLQG--QRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCE--EEEEeCCCcchHHHHh-----ccccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence            68999999999999999999999997  9999999876543322     13577889999999999999988854  479


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |++|||+|....     ...+..+.+.+++.+.+++|+.+++.+++.+.+++++. .+      .++++||..+..+..+
T Consensus        73 d~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~------~iv~~ss~~g~~~~~~  140 (225)
T PRK08177         73 DLLFVNAGISGP-----AHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QG------VLAFMSSQLGSVELPD  140 (225)
T ss_pred             CEEEEcCcccCC-----CCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CC------EEEEEccCccccccCC
Confidence            999999998641     12345678889999999999999999999999998753 23      8999999877665433


Q ss_pred             CCCcchhhhhHHHHHHHHHHhc
Q 028056          189 LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..++..|+++|++++.|+++++
T Consensus       141 ~~~~~~Y~~sK~a~~~~~~~l~  162 (225)
T PRK08177        141 GGEMPLYKASKAALNSMTRSFV  162 (225)
T ss_pred             CCCccchHHHHHHHHHHHHHHH
Confidence            4567789999999999999994

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=8.7e-26  Score=165.51  Aligned_cols=180  Identities=22%  Similarity=0.262  Sum_probs=151.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .+.+|-+.+||||.+|+|++.+++|+.+|+.  +++.+....+.+...+   +.++++.+.++|++++.++...+...+.
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgas--v~lldlp~skg~~vak---elg~~~vf~padvtsekdv~aala~ak~   79 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGAS--VALLDLPQSKGADVAK---ELGGKVVFTPADVTSEKDVRAALAKAKA   79 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCce--EEEEeCCcccchHHHH---HhCCceEEeccccCcHHHHHHHHHHHHh
Confidence            4578899999999999999999999999998  8888887766554333   4478999999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +||++|.+|||||+....-.+ ...+-...+.|++.+.+++|++|+|.+++.....|.++..+..+-.+.|||..|++..
T Consensus        80 kfgrld~~vncagia~a~kty-n~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaaf  158 (260)
T KOG1199|consen   80 KFGRLDALVNCAGIAYAFKTY-NVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAF  158 (260)
T ss_pred             hccceeeeeeccceeeeeeee-eecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeee
Confidence            999999999999987521111 1233345677999999999999999999999999988877777777899999999999


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   --++.+|++||+++-+||--+ +||
T Consensus       159 dg---q~gqaaysaskgaivgmtlpiardl  185 (260)
T KOG1199|consen  159 DG---QTGQAAYSASKGAIVGMTLPIARDL  185 (260)
T ss_pred             cC---ccchhhhhcccCceEeeechhhhhc
Confidence            88   578899999999999887655 443

>PRK08324 short chain dehydrogenase; Validated

Probab=99.92  E-value=1.2e-24  Score=196.40  Aligned_cols=169  Identities=21%  Similarity=0.279  Sum_probs=147.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ..+.||+++||||+|+||.+++++|+++|++  |++++|+.+.++...+.+... .++.++.||++|++++.++++++.+
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~--Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~  494 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGAC--VVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAAL  494 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCE--EEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999996  999999987655544433322 4788999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|++|||||...       ..++.+.+.++|++.+++|+.|++.+++.+.+.|++++.+     ++||++||..+.
T Consensus       495 ~~g~iDvvI~~AG~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~-----g~iV~vsS~~~~  562 (681)
T PRK08324        495 AFGGVDIVVSNAGIAI-------SGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLG-----GSIVFIASKNAV  562 (681)
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----cEEEEECCcccc
Confidence            9999999999999874       5667788999999999999999999999999999886642     399999999888


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++++++++
T Consensus       563 ~~---~~~~~~Y~asKaa~~~l~~~la  586 (681)
T PRK08324        563 NP---GPNFGAYGAAKAAELHLVRQLA  586 (681)
T ss_pred             CC---CCCcHHHHHHHHHHHHHHHHHH
Confidence            77   5778899999999999999984

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.2e-24  Score=172.03  Aligned_cols=165  Identities=21%  Similarity=0.245  Sum_probs=129.8

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++++|+++||||+||||.+++++|+++|++  |++.+|+.. ..+.+.+.+...+.++.++++|++|++++.++++++.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~--V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAH--VVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCE--EEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999997  888888754 23333333433455788999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++.+|++|||||...       ..      ...+...+++|+.+++.+++.+.++|.+.  +      ++|++||..+.
T Consensus        81 ~~~~~d~vi~~ag~~~-------~~------~~~~~~~~~vn~~~~~~l~~~~~~~~~~~--~------~iv~isS~~~~  139 (248)
T PRK07806         81 EFGGLDALVLNASGGM-------ES------GMDEDYAMRLNRDAQRNLARAALPLMPAG--S------RVVFVTSHQAH  139 (248)
T ss_pred             hCCCCcEEEECCCCCC-------CC------CCCcceeeEeeeHHHHHHHHHHHhhccCC--c------eEEEEeCchhh
Confidence            8899999999998642       11      11245679999999999999999988543  2      89999996543


Q ss_pred             C-CC-CCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 I-GD-NRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~-~~-~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      . +. .+.+.+..|+++|++++.+++++ .++
T Consensus       140 ~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~  171 (248)
T PRK07806        140 FIPTVKTMPEYEPVARSKRAGEDALRALRPEL  171 (248)
T ss_pred             cCccccCCccccHHHHHHHHHHHHHHHHHHHh
Confidence            2 11 12455789999999999999998 444

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.9e-24  Score=169.13  Aligned_cols=154  Identities=25%  Similarity=0.335  Sum_probs=132.0

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +++|+++||||+++||.+++++|+++|++  |++++|+.+..           ....++.+|++|.++++++++++.+.+
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~--v~~~~r~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQ--VIGIARSAIDD-----------FPGELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCE--EEEEeCCcccc-----------cCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999987  99999887541           012468899999999999999998876


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                       ++|++|||+|...       ..++.+.+.+++++.+++|+.+++.+.+.+.+.|++.+.+      +||++||... .+
T Consensus        68 -~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~-~~  132 (234)
T PRK07577         68 -PVDAIVNNVGIAL-------PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQG------RIVNICSRAI-FG  132 (234)
T ss_pred             -CCcEEEECCCCCC-------CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEccccc-cC
Confidence             6899999999864       4566778899999999999999999999999999877655      9999999853 33


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                         .+....|+++|+++++++++++
T Consensus       133 ---~~~~~~Y~~sK~a~~~~~~~~a  154 (234)
T PRK07577        133 ---ALDRTSYSAAKSALVGCTRTWA  154 (234)
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHH
Confidence               3667899999999999999984

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.9e-24  Score=171.94  Aligned_cols=162  Identities=29%  Similarity=0.420  Sum_probs=134.5

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++++++||||+++||.++++.|+++|++  |++++|+.++.+++.+   .  .+..++.+|+++.+++.+++++  
T Consensus         4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~--V~~~~r~~~~~~~~~~---~--~~~~~~~~D~~~~~~v~~~~~~--   74 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIGRACAVALAQRGAR--VVAAARNAAALDRLAG---E--TGCEPLRLDVGDDAAIRAALAA--   74 (245)
T ss_pred             ccccCCCEEEEeCCcchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---H--hCCeEEEecCCCHHHHHHHHHH--
Confidence            35688999999999999999999999999997  9999998765433222   1  1356788999999988887765  


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                        ++++|++|||+|...       ..+..+.+.+++++.+++|+.+++.+++++.+.+.+.+..     ++||++||..+
T Consensus        75 --~~~~d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~iv~~sS~~~  140 (245)
T PRK07060         75 --AGAFDGLVNCAGIAS-------LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRG-----GSIVNVSSQAA  140 (245)
T ss_pred             --hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-----cEEEEEccHHH
Confidence              478999999999864       4556678888999999999999999999999998765421     39999999888


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|++++.++++++
T Consensus       141 ~~~---~~~~~~y~~sK~a~~~~~~~~a  165 (245)
T PRK07060        141 LVG---LPDHLAYCASKAALDAITRVLC  165 (245)
T ss_pred             cCC---CCCCcHhHHHHHHHHHHHHHHH
Confidence            777   5778899999999999999985

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.92  E-value=5.6e-24  Score=168.43  Aligned_cols=162  Identities=26%  Similarity=0.386  Sum_probs=137.5

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +||||++++||..++++|+++|++  |++.+|+. +..+...+.+...+.++.++.+|++|+++++++++++.+.++++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAK--VIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999997  88888875 333333333444456788999999999999999999999999999


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCC
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL  189 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~  189 (214)
                      ++|||+|...       ..+..+.+.+.+++.+++|+.+++.+++.+.+++.+.+.+      +++++||..+..+   .
T Consensus        79 ~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~~v~~sS~~~~~g---~  142 (239)
T TIGR01830        79 ILVNNAGITR-------DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSG------RIINISSVVGLMG---N  142 (239)
T ss_pred             EEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCe------EEEEECCccccCC---C
Confidence            9999999764       3455677888999999999999999999999998765554      9999999888877   5


Q ss_pred             CCcchhhhhHHHHHHHHHHhc
Q 028056          190 GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       190 ~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ++...|+++|++++.+++.++
T Consensus       143 ~~~~~y~~~k~a~~~~~~~l~  163 (239)
T TIGR01830       143 AGQANYAASKAGVIGFTKSLA  163 (239)
T ss_pred             CCCchhHHHHHHHHHHHHHHH
Confidence            778899999999999999984

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=6.7e-24  Score=168.20  Aligned_cols=165  Identities=18%  Similarity=0.216  Sum_probs=135.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++|+++||||+++||.++++.|+++|++  |++++|+++..+.+.+..... .++++++||++++++++++++++.+
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   77 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQ--VCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAK   77 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  999999887655443333322 3688899999999999999999988


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++.+|.+|+|+|...       ..+..+  .+.+++.+++|+.+++.+.+.++|.+.+.  +      .+|++||..+.
T Consensus        78 ~~~~id~ii~~ag~~~-------~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~------~iv~~ss~~~~  140 (238)
T PRK05786         78 VLNAIDGLVVTVGGYV-------EDTVEE--FSGLEEMLTNHIKIPLYAVNASLRFLKEG--S------SIVLVSSMSGI  140 (238)
T ss_pred             HhCCCCEEEEcCCCcC-------CCchHH--HHHHHHHHHHhchHHHHHHHHHHHHHhcC--C------EEEEEecchhc
Confidence            8899999999998753       222332  38899999999999999999999998653  2      89999998765


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+.  .+....|+++|++++.++++++
T Consensus       141 ~~~--~~~~~~Y~~sK~~~~~~~~~~~  165 (238)
T PRK05786        141 YKA--SPDQLSYAVAKAGLAKAVEILA  165 (238)
T ss_pred             ccC--CCCchHHHHHHHHHHHHHHHHH
Confidence            432  4667889999999999999884

>PRK08017 oxidoreductase; Provisional

Probab=99.91  E-value=1.1e-23  Score=168.64  Aligned_cols=158  Identities=25%  Similarity=0.335  Sum_probs=135.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-CC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-GS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~  107 (214)
                      |+++||||+|+||.+++++|+++|++  |++++|+.++.+.+.+      .++..++||++|.+++.++++++.+.. ++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~--v~~~~r~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYR--VLAACRKPDDVARMNS------LGFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHhHHHHh------CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999997  8999998765443221      236788999999999999999887754 68


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||+|...       ..+..+.+.+++++.+++|+.|++.+++.+++.+++.+.+      .||++||..+..+  
T Consensus        75 ~~~ii~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~------~iv~~ss~~~~~~--  139 (256)
T PRK08017         75 LYGLFNNAGFGV-------YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEG------RIVMTSSVMGLIS--  139 (256)
T ss_pred             CeEEEECCCCCC-------ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC------EEEEEcCcccccC--
Confidence            999999999754       3566778889999999999999999999999999887655      9999999888776  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .++...|+++|++++.++++++
T Consensus       140 -~~~~~~Y~~sK~~~~~~~~~l~  161 (256)
T PRK08017        140 -TPGRGAYAASKYALEAWSDALR  161 (256)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHH
Confidence             5778899999999999999874

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.2e-23  Score=166.52  Aligned_cols=152  Identities=18%  Similarity=0.204  Sum_probs=113.6

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ....+++|+++||||++|||.++|++|+++|++  |++.+|++...  .....   .....++.+|++|.+++.+     
T Consensus         8 ~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~--Vi~~~r~~~~~--~~~~~---~~~~~~~~~D~~~~~~~~~-----   75 (245)
T PRK12367          8 AQSTWQGKRIGITGASGALGKALTKAFRAKGAK--VIGLTHSKINN--SESND---ESPNEWIKWECGKEESLDK-----   75 (245)
T ss_pred             hHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCE--EEEEECCchhh--hhhhc---cCCCeEEEeeCCCHHHHHH-----
Confidence            346788999999999999999999999999997  88888876321  11111   1123578899999987753     


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC--CCCCCCceEEEEeec
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG--TGIERDVAVVANLSA  179 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~~~~~~~iv~iss  179 (214)
                        .++++|++|||||...       .   .+.+.+++++.+++|+.++++++|.++|.|++++  .+     +.+++.+|
T Consensus        76 --~~~~iDilVnnAG~~~-------~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g-----~~iiv~ss  138 (245)
T PRK12367         76 --QLASLDVLILNHGINP-------G---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIP-----KEIWVNTS  138 (245)
T ss_pred             --hcCCCCEEEECCccCC-------c---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCC-----eEEEEEec
Confidence              3468999999999643       1   2456889999999999999999999999997642  12     23444456


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHH
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCK  206 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~  206 (214)
                      ..+..+    ++...|++||+|+..+.
T Consensus       139 ~a~~~~----~~~~~Y~aSKaal~~~~  161 (245)
T PRK12367        139 EAEIQP----ALSPSYEISKRLIGQLV  161 (245)
T ss_pred             ccccCC----CCCchhHHHHHHHHHHH
Confidence            555443    35578999999986654

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.2e-24  Score=167.27  Aligned_cols=152  Identities=16%  Similarity=0.134  Sum_probs=126.2

Q ss_pred             EEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 028056           32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLL  111 (214)
Q Consensus        32 lItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~l  111 (214)
                      +||||+++||.+++++|+++|++  |++++|+++..+...+.+. .+.+++++.||++|++++.++++++    +++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGAR--VTIASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAEA----GPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHhc----CCCCEE
Confidence            69999999999999999999997  9999998765444333332 2457889999999999998888764    789999


Q ss_pred             EECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCC
Q 028056          112 INASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG  191 (214)
Q Consensus       112 v~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~  191 (214)
                      |||+|...       ..++.+.+.+++++.+++|+.+++.+++  .+.+.+  .      ++||++||..+..+   .++
T Consensus        74 i~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~--~------g~iv~~ss~~~~~~---~~~  133 (230)
T PRK07041         74 VITAADTP-------GGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP--G------GSLTFVSGFAAVRP---SAS  133 (230)
T ss_pred             EECCCCCC-------CCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC--C------eEEEEECchhhcCC---CCc
Confidence            99999864       3556778889999999999999999999  444432  2      39999999988776   577


Q ss_pred             cchhhhhHHHHHHHHHHhc
Q 028056          192 WHSYRASKAALNQCKILAM  210 (214)
Q Consensus       192 ~~~Y~asKaa~~~~~~~la  210 (214)
                      ...|+++|+++++++++++
T Consensus       134 ~~~Y~~sK~a~~~~~~~la  152 (230)
T PRK07041        134 GVLQGAINAALEALARGLA  152 (230)
T ss_pred             chHHHHHHHHHHHHHHHHH
Confidence            8899999999999999984

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.91  E-value=9e-24  Score=168.38  Aligned_cols=165  Identities=18%  Similarity=0.227  Sum_probs=148.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +.++|||||+|||+++|++...+|++  |-++.|+.+++.++.+.++-.  -.++.+..+|+.|-+++..+++++.+..+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~--Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~  111 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGAD--VTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG  111 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCc--eEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC
Confidence            79999999999999999999999999  999999999887765554322  22477899999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|.+|||||...       .+.+.+.++++++..+++|..|+++++++.++.|++...-     |+|+.++|..+..+ 
T Consensus       112 ~~d~l~~cAG~~v-------~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~-----g~I~~vsS~~a~~~-  178 (331)
T KOG1210|consen  112 PIDNLFCCAGVAV-------PGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHL-----GRIILVSSQLAMLG-  178 (331)
T ss_pred             CcceEEEecCccc-------ccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccC-----cEEEEehhhhhhcC-
Confidence            9999999999875       6788999999999999999999999999999999987621     39999999999998 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        ..++++|+++|+|+.++...++
T Consensus       179 --i~GysaYs~sK~alrgLa~~l~  200 (331)
T KOG1210|consen  179 --IYGYSAYSPSKFALRGLAEALR  200 (331)
T ss_pred             --cccccccccHHHHHHHHHHHHH
Confidence              7999999999999999999984

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.91  E-value=7.3e-23  Score=154.16  Aligned_cols=163  Identities=20%  Similarity=0.276  Sum_probs=134.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccccc---chhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL---DLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      |+++||||+++||.+++++|+++|.. .|++.+|+++..+...   +.+.+.+.++.++.+|++++++++++++++.+.+
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGAR-HLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCC-eEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            58999999999999999999999985 4788888766544321   2333445678899999999999999999999889


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|++|||+|...       ..+..+.+.+++++.+++|+.+++.+++.+.+    .+.      ++++++||..+..+
T Consensus        80 ~~id~li~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~------~~ii~~ss~~~~~~  142 (180)
T smart00822       80 GPLRGVIHAAGVLD-------DGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPL------DFFVLFSSVAGVLG  142 (180)
T ss_pred             CCeeEEEEccccCC-------ccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCc------ceEEEEccHHHhcC
Confidence            99999999999764       34566788899999999999999999998732    222      38999999988777


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHhccc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILAMDF  212 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~la~~  212 (214)
                         .++...|+++|++++.+++.++.+
T Consensus       143 ---~~~~~~y~~sk~~~~~~~~~~~~~  166 (180)
T smart00822      143 ---NPGQANYAAANAFLDALAAHRRAR  166 (180)
T ss_pred             ---CCCchhhHHHHHHHHHHHHHHHhc
Confidence               577889999999999999987654

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.90  E-value=9.9e-23  Score=160.20  Aligned_cols=160  Identities=31%  Similarity=0.429  Sum_probs=128.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |+++||||+++||.+++++|+++|++  |++++|+++..+++..      ..+.++.+|+++.++++++++++.+  +++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~--v~~~~r~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~--~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWR--VIATARDAAALAALQA------LGAEALALDVADPASVAGLAWKLDG--EAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCE--EEEEECCHHHHHHHHh------ccceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence            68999999999999999999999997  8889998765443221      1356889999999999998877643  479


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |++|||+|....     ...+..+.+.+++++.+++|+.+++.+++.+.++|.+. .+      .+++++|..+..+..+
T Consensus        72 d~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g------~iv~isS~~~~~~~~~  139 (222)
T PRK06953         72 DAAVYVAGVYGP-----RTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GG------VLAVLSSRMGSIGDAT  139 (222)
T ss_pred             CEEEECCCcccC-----CCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CC------eEEEEcCccccccccc
Confidence            999999997631     12345567889999999999999999999999988653 23      8999999887766422


Q ss_pred             CCCcchhhhhHHHHHHHHHHhc
Q 028056          189 LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ......|+++|++++++++.++
T Consensus       140 ~~~~~~Y~~sK~a~~~~~~~~~  161 (222)
T PRK06953        140 GTTGWLYRASKAALNDALRAAS  161 (222)
T ss_pred             CCCccccHHhHHHHHHHHHHHh
Confidence            2223469999999999999884

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.89  E-value=1.4e-22  Score=171.51  Aligned_cols=160  Identities=22%  Similarity=0.196  Sum_probs=121.3

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++++|+++||||+||||.+++++|+++|++  |++++|++++.+.   .......++..+.+|++|++++.+.+   
T Consensus       172 ta~sl~gK~VLITGASgGIG~aLA~~La~~G~~--Vi~l~r~~~~l~~---~~~~~~~~v~~v~~Dvsd~~~v~~~l---  243 (406)
T PRK07424        172 TALSLKGKTVAVTGASGTLGQALLKELHQQGAK--VVALTSNSDKITL---EINGEDLPVKTLHWQVGQEAALAELL---  243 (406)
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHH---HHhhcCCCeEEEEeeCCCHHHHHHHh---
Confidence            345678999999999999999999999999997  8888887754322   12222335678899999998875543   


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                          +++|++|||||...          ..+.+.+++++.+++|+.|++.+++.++|.|++++.+  ...+.++|+|+ +
T Consensus       244 ----~~IDiLInnAGi~~----------~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~--~~~~iiVn~Ss-a  306 (406)
T PRK07424        244 ----EKVDILIINHGINV----------HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDK--ATKEVWVNTSE-A  306 (406)
T ss_pred             ----CCCCEEEECCCcCC----------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCCeEEEEEcc-c
Confidence                57999999999753          1256788999999999999999999999999876421  01136777765 3


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..    .+....|++||+|+.++++..+
T Consensus       307 ~~~----~~~~~~Y~ASKaAl~~l~~l~~  331 (406)
T PRK07424        307 EVN----PAFSPLYELSKRALGDLVTLRR  331 (406)
T ss_pred             ccc----CCCchHHHHHHHHHHHHHHHHH
Confidence            322    2345689999999999986443

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.89  E-value=6.4e-23  Score=156.66  Aligned_cols=160  Identities=18%  Similarity=0.256  Sum_probs=126.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CC--cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~-~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++|||||.||||..++++|+++|.. +|++++|+. ..  .+...+.++..+.++.+++||++|++++.++++++.++++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~-~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGAR-RLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-S-EEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCC-EEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            8999999999999999999999987 899999993 22  2234455555678999999999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      +++++||+||...       +.++.+.+++++++.+...+.|...+.+.+.+    .+..      .+|.+||+.+..| 
T Consensus        81 ~i~gVih~ag~~~-------~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~------~~i~~SSis~~~G-  142 (181)
T PF08659_consen   81 PIDGVIHAAGVLA-------DAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLD------FFILFSSISSLLG-  142 (181)
T ss_dssp             -EEEEEE--------------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTS------EEEEEEEHHHHTT-
T ss_pred             Ccceeeeeeeeec-------ccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCC------eEEEECChhHhcc-
Confidence            9999999999875       67889999999999999999999999998765    2222      9999999999998 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .++...|+++.+.++.|.+..+
T Consensus       143 --~~gq~~YaaAN~~lda~a~~~~  164 (181)
T PF08659_consen  143 --GPGQSAYAAANAFLDALARQRR  164 (181)
T ss_dssp             ---TTBHHHHHHHHHHHHHHHHHH
T ss_pred             --CcchHhHHHHHHHHHHHHHHHH
Confidence              6899999999999999998764

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.89  E-value=3e-23  Score=158.26  Aligned_cols=170  Identities=23%  Similarity=0.261  Sum_probs=138.5

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+|++|+||+|.|||..++..+..++..  .+...++...++ .+.+...++........|++..+.+.++++..++..+
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e--~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDE--ALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchH--HHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            4688999999999998888888887776  444444444333 3333334455555667899999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchh--hccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLN--KVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      +.|++|||||..+      +..+..  ..+.++|.++|++|+.+.+.+.+.++|.+++++..     +.+||+||.+.+.
T Consensus        82 kr~iiI~NAG~lg------dvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~-----~~vVnvSS~aav~  150 (253)
T KOG1204|consen   82 KRDIIIHNAGSLG------DVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVN-----GNVVNVSSLAAVR  150 (253)
T ss_pred             ceeEEEecCCCcc------chhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCcc-----CeEEEecchhhhc
Confidence            9999999999987      344444  78889999999999999999999999999988522     3999999999999


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhcccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAMDFE  213 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la~~~  213 (214)
                      +   .++|..||++|+|.++|.+.||.-|
T Consensus       151 p---~~~wa~yc~~KaAr~m~f~~lA~EE  176 (253)
T KOG1204|consen  151 P---FSSWAAYCSSKAARNMYFMVLASEE  176 (253)
T ss_pred             c---ccHHHHhhhhHHHHHHHHHHHhhcC
Confidence            8   7999999999999999999996543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.88  E-value=2.5e-22  Score=197.90  Aligned_cols=161  Identities=17%  Similarity=0.247  Sum_probs=135.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCC--------------c------------------------
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNG--------------A------------------------   67 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~--------------~------------------------   67 (214)
                      +++++|||||++|||.++|++|+++ |++  |++++|+...              +                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~--viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~ 2073 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAH--FILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALV 2073 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCE--EEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcc
Confidence            5899999999999999999999998 465  9999998210              0                        


Q ss_pred             ------cc---ccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhh
Q 028056           68 ------TG---LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL  138 (214)
Q Consensus        68 ------~~---~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~  138 (214)
                            .+   ..+.+.+.+.++.++.||++|.++++++++++.+. +++|+||||||+..       ...+.+.+.++|
T Consensus      2074 ~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~-------~~~i~~~t~e~f 2145 (2582)
T TIGR02813      2074 RPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLA-------DKHIQDKTLEEF 2145 (2582)
T ss_pred             cccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCC-------CCCcccCCHHHH
Confidence                  00   01112334668899999999999999999999887 68999999999875       567889999999


Q ss_pred             hhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       139 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ++.+++|+.|++.+++++.+.+.+          .||++||+.+..+   .+++..|+++|++++.+++.++
T Consensus      2146 ~~v~~~nv~G~~~Ll~al~~~~~~----------~IV~~SSvag~~G---~~gqs~YaaAkaaL~~la~~la 2204 (2582)
T TIGR02813      2146 NAVYGTKVDGLLSLLAALNAENIK----------LLALFSSAAGFYG---NTGQSDYAMSNDILNKAALQLK 2204 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCC----------eEEEEechhhcCC---CCCcHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998765432          8999999999988   5788999999999999999883

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.4e-21  Score=153.61  Aligned_cols=156  Identities=25%  Similarity=0.348  Sum_probs=129.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      .|+++||||+|+||.+++++|+++ ++  |++++|+.+..+.+.+.    ...+.++++|++|++++.++++++    ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~--V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~----~~   71 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HT--LLLGGRPAERLDELAAE----LPGATPFPVDLTDPEAIAAAVEQL----GR   71 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CC--EEEEeCCHHHHHHHHHH----hccceEEecCCCCHHHHHHHHHhc----CC
Confidence            479999999999999999999999 76  99999987543332221    135788999999999988877754    57


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++||++|...       ..+..+.+.+++.+.+++|+.+.+.+++.+++.++++.       +++|++||..+..+  
T Consensus        72 id~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~v~~ss~~~~~~--  135 (227)
T PRK08219         72 LDVLVHNAGVAD-------LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-------GHVVFINSGAGLRA--  135 (227)
T ss_pred             CCEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-------CeEEEEcchHhcCc--
Confidence            999999999764       34556778899999999999999999999999987753       28999999887766  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhcc
Q 028056          188 RLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                       .++...|+.+|++++.+++.+++
T Consensus       136 -~~~~~~y~~~K~a~~~~~~~~~~  158 (227)
T PRK08219        136 -NPGWGSYAASKFALRALADALRE  158 (227)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHH
Confidence             56778999999999999998853

>PRK06720 hypothetical protein; Provisional

Probab=99.86  E-value=6.4e-21  Score=143.79  Aligned_cols=148  Identities=14%  Similarity=0.220  Sum_probs=115.5

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|+++||||++|||.+++++|++.|++  |++.+|+.+..+...+.+.+.+.+..++++|+++.++++++++++.
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~--V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~   88 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAK--VIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITL   88 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            46689999999999999999999999999987  9999998776555444444445677889999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCC-CCCceEEEEeecCc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI-ERDVAVVANLSARV  181 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-~~~~~~iv~iss~~  181 (214)
                      +.++++|++|||||...      ...++.+.+.+. ++  .+|+.+++..++.+.++|.+++... ....+++..+|+.+
T Consensus        89 ~~~G~iDilVnnAG~~~------~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (169)
T PRK06720         89 NAFSRIDMLFQNAGLYK------IDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKG  159 (169)
T ss_pred             HHcCCCCEEEECCCcCC------CCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccc
Confidence            99999999999999865      234444444444 43  7788888999999999988765432 12225777777644

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.83  E-value=8.7e-20  Score=139.60  Aligned_cols=171  Identities=21%  Similarity=0.269  Sum_probs=145.0

Q ss_pred             ccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        24 ~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ..|+||+.||+|-.  .+|+-.+|+.+.++|+.  ++++..++ ++++ ++++....+. ...++||+++.++++++|++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe--L~fTy~~e-~l~krv~~la~~~~s-~~v~~cDV~~d~~i~~~f~~   77 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAE--LAFTYQGE-RLEKRVEELAEELGS-DLVLPCDVTNDESIDALFAT   77 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCE--EEEEeccH-HHHHHHHHHHhhccC-CeEEecCCCCHHHHHHHHHH
Confidence            46899999999954  69999999999999998  88888877 4443 5555544433 66789999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      ++++|+.+|++||+-++..   .....+.+.|.+.|.|...+++..++...+++++.|.|...+        +|+.++..
T Consensus        78 i~~~~g~lD~lVHsIaFa~---k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~gg--------SiltLtYl  146 (259)
T COG0623          78 IKKKWGKLDGLVHSIAFAP---KEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGG--------SILTLTYL  146 (259)
T ss_pred             HHHhhCcccEEEEEeccCC---hHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCC--------cEEEEEec
Confidence            9999999999999999874   112346677799999999999999999999999999998743        99999998


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+.+.   .|.+...+.+|+++++-+|.| +|+
T Consensus       147 gs~r~---vPnYNvMGvAKAaLEasvRyLA~dl  176 (259)
T COG0623         147 GSERV---VPNYNVMGVAKAALEASVRYLAADL  176 (259)
T ss_pred             cceee---cCCCchhHHHHHHHHHHHHHHHHHh
Confidence            88777   788889999999999999998 443

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.81  E-value=4.3e-19  Score=137.61  Aligned_cols=180  Identities=24%  Similarity=0.387  Sum_probs=141.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCC---cEEEEeecCCCCcccccchhhcCCC----ceeEEEecCCCHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDK---GCVIATCRNPNGATGLLDLKNRFPE----RLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~---~~vi~~~r~~~~~~~~~~~~~~~~~----~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ..|+++|||+++|||.++|++|++....   -++++.+|+.++++.....+.+...    .+.++++|+++.+++.++..
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            3589999999999999999999987654   5689999999998875444433333    67889999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCC----------CC----------cchhhccHhhhhhheeeechhHHHHHHHHhhH
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQ----------PE----------TTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL  159 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~----------~~----------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  159 (214)
                      ++.++|+++|.+.-|||....|-..-          |.          ..-...+.+.+.++|++|+.|+|.+.+.+.|.
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            99999999999999999876321100          00          01124566788999999999999999999999


Q ss_pred             HhcCCCCCCCCceEEEEeecCcccCCC------CCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          160 LKVGGTGIERDVAVVANLSARVGSIGD------NRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       160 l~~~~~~~~~~~~~iv~iss~~~~~~~------~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +-.+...      .+|.+||..+...+      .-+.+..+|+.||.+++.+.-++ .+|
T Consensus       162 l~~~~~~------~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~  215 (341)
T KOG1478|consen  162 LCHSDNP------QLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNF  215 (341)
T ss_pred             hhcCCCC------eEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccc
Confidence            8776543      89999998765532      12466789999999999887766 554

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.80  E-value=9.8e-19  Score=146.48  Aligned_cols=157  Identities=18%  Similarity=0.277  Sum_probs=117.1

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +++|++|||||+|+||.+++++|+++|++  |++++|+............ .+.++.++.+|++|.+++.+++++.    
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAE--VYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCE--EEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc----
Confidence            56899999999999999999999999997  8888887765332222221 1346778999999999998888865    


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                       ++|+|||+|+...           .+.+.+++...+++|+.+++.+++++...   ...      .++|++||...+..
T Consensus        75 -~~d~vih~A~~~~-----------~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~------~~iv~~SS~~vyg~  133 (349)
T TIGR02622        75 -KPEIVFHLAAQPL-----------VRKSYADPLETFETNVMGTVNLLEAIRAI---GSV------KAVVNVTSDKCYRN  133 (349)
T ss_pred             -CCCEEEECCcccc-----------cccchhCHHHHHHHhHHHHHHHHHHHHhc---CCC------CEEEEEechhhhCC
Confidence             6899999998532           12234556678899999999999987421   112      28999999643321


Q ss_pred             ---------CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 ---------DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ---------~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                               ..+..+...|+.+|.+.+.+++.++
T Consensus       134 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~  167 (349)
T TIGR02622       134 DEWVWGYRETDPLGGHDPYSSSKACAELVIASYR  167 (349)
T ss_pred             CCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHH
Confidence                     1123456789999999999998874

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.80  E-value=6.5e-19  Score=146.21  Aligned_cols=149  Identities=17%  Similarity=0.176  Sum_probs=110.7

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +++|++|||||+|+||++++++|+++|....|++.+|+......+.+...  ..++.++.+|++|.+++.++++      
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh------
Confidence            46899999999999999999999998721148888887654322222221  2468899999999999887765      


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                       .+|++||+||...        .+..+.+   ..+.+++|+.|++.+++++.+.    +.+      ++|++||..... 
T Consensus        74 -~iD~Vih~Ag~~~--------~~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~----~~~------~iV~~SS~~~~~-  130 (324)
T TIGR03589        74 -GVDYVVHAAALKQ--------VPAAEYN---PFECIRTNINGAQNVIDAAIDN----GVK------RVVALSTDKAAN-  130 (324)
T ss_pred             -cCCEEEECcccCC--------CchhhcC---HHHHHHHHHHHHHHHHHHHHHc----CCC------EEEEEeCCCCCC-
Confidence             5899999999643        1122222   2457999999999999998642    323      899999965432 


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                           +...|+++|++.+.+++.++
T Consensus       131 -----p~~~Y~~sK~~~E~l~~~~~  150 (324)
T TIGR03589       131 -----PINLYGATKLASDKLFVAAN  150 (324)
T ss_pred             -----CCCHHHHHHHHHHHHHHHHH
Confidence                 24679999999999998864

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.78  E-value=3.3e-18  Score=142.73  Aligned_cols=163  Identities=15%  Similarity=0.058  Sum_probs=117.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--ccccchh---hcCCCceeEEEecCCCHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLK---NRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~--~~~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ++++|++|||||+|+||.+++++|+++|++  |++++|++...  +.+....   ...+.++.++.+|++|.+++.++++
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   80 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYE--VHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLD   80 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCE--EEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHH
Confidence            567899999999999999999999999997  88888865431  1122211   1123468899999999999998888


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      +.     .+|+|||+|+...       .    ....+.....+++|+.|+..+++++.+...+.+     ...++|++||
T Consensus        81 ~~-----~~d~Vih~A~~~~-------~----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~-----~~~~~v~~Ss  139 (340)
T PLN02653         81 DI-----KPDEVYNLAAQSH-------V----AVSFEMPDYTADVVATGALRLLEAVRLHGQETG-----RQIKYYQAGS  139 (340)
T ss_pred             Hc-----CCCEEEECCcccc-------h----hhhhhChhHHHHHHHHHHHHHHHHHHHhccccc-----cceeEEEecc
Confidence            65     6899999999653       1    112234456678999999999999887764421     1126788877


Q ss_pred             CcccCC-------CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          180 RVGSIG-------DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       180 ~~~~~~-------~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ...+..       ..+..+...|+.||.+.+.+++.++
T Consensus       140 ~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~  177 (340)
T PLN02653        140 SEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYR  177 (340)
T ss_pred             HHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHH
Confidence            522211       1123346789999999999999873

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.77  E-value=2.6e-18  Score=146.90  Aligned_cols=153  Identities=17%  Similarity=0.095  Sum_probs=129.0

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++||++|||||+|.||+++++++++.+.+ .+++.++++.+...+...+...  ..++.++-+|+.|.+.++++++..  
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~-~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~--  324 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPK-EIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH--  324 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCC-EEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC--
Confidence            58999999999999999999999999998 8999999999877766655543  357889999999999999999865  


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                         ++|+++|.|+.-+        -|+.|   .++.+.+++|+.|+.++++++...-.+          .+|++|+.-++
T Consensus       325 ---kvd~VfHAAA~KH--------VPl~E---~nP~Eai~tNV~GT~nv~~aa~~~~V~----------~~V~iSTDKAV  380 (588)
T COG1086         325 ---KVDIVFHAAALKH--------VPLVE---YNPEEAIKTNVLGTENVAEAAIKNGVK----------KFVLISTDKAV  380 (588)
T ss_pred             ---CCceEEEhhhhcc--------Ccchh---cCHHHHHHHhhHhHHHHHHHHHHhCCC----------EEEEEecCccc
Confidence               7999999999754        33333   455678999999999999998654332          99999999887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      .|.      ..||++|...+.+++++.+
T Consensus       381 ~Pt------NvmGaTKr~aE~~~~a~~~  402 (588)
T COG1086         381 NPT------NVMGATKRLAEKLFQAANR  402 (588)
T ss_pred             CCc------hHhhHHHHHHHHHHHHHhh
Confidence            773      5999999999999999854

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.77  E-value=3.8e-18  Score=141.45  Aligned_cols=155  Identities=20%  Similarity=0.157  Sum_probs=114.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh--cCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++|++|||||+|+||++++++|+++|++  |++++|+....+.......  ....++.++.+|++|.++++++++     
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYT--INATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-----   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCE--EEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-----
Confidence            4789999999999999999999999997  8888888765443322221  112468899999999998887775     


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                        .+|++|||||...       .    ..+.+.+.+.+++|+.+++.+++++.+.+.   .      ++||++||..+..
T Consensus        77 --~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~---~------~~iv~~SS~~~~~  134 (325)
T PLN02989         77 --GCETVFHTASPVA-------I----TVKTDPQVELINPAVNGTINVLRTCTKVSS---V------KRVILTSSMAAVL  134 (325)
T ss_pred             --CCCEEEEeCCCCC-------C----CCCCChHHHHHHHHHHHHHHHHHHHHHcCC---c------eEEEEecchhhee
Confidence              5899999998542       1    223345678899999999999999876531   2      2899999986543


Q ss_pred             CCC-------------CCC------CcchhhhhHHHHHHHHHHhc
Q 028056          185 GDN-------------RLG------GWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~-------------~~~------~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..             +..      ....|+.+|.+.+.+.+.++
T Consensus       135 ~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~  179 (325)
T PLN02989        135 APETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFA  179 (325)
T ss_pred             cCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHH
Confidence            210             000      12579999999999988763

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.75  E-value=1.6e-17  Score=138.85  Aligned_cols=157  Identities=17%  Similarity=0.100  Sum_probs=111.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--ccccchh----hcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLK----NRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~--~~~~~~~----~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      |++|||||+|+||.+++++|++.|++  |++++|+.+..  +......    ...+.++.++.+|++|.+++.++++.. 
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYE--VHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI-   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCE--EEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC-
Confidence            68999999999999999999999997  88888876421  1121111    111246889999999999998888865 


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                          ++|+|||+|+...       ..    ...+.....+++|+.|+..+++++.+.-.+..       .++|++||...
T Consensus        78 ----~~d~ViH~Aa~~~-------~~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~-------~~~v~~SS~~v  135 (343)
T TIGR01472        78 ----KPTEIYNLAAQSH-------VK----VSFEIPEYTADVDGIGTLRLLEAVRTLGLIKS-------VKFYQASTSEL  135 (343)
T ss_pred             ----CCCEEEECCcccc-------cc----hhhhChHHHHHHHHHHHHHHHHHHHHhCCCcC-------eeEEEeccHHh
Confidence                6899999999753       11    11122345567899999999999876411111       27888998643


Q ss_pred             cCC--------CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIG--------DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~--------~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..        ..+..+...|+.||.+.+.+++.++
T Consensus       136 yg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~  171 (343)
T TIGR01472       136 YGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYR  171 (343)
T ss_pred             hCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHH
Confidence            221        1133456799999999999998874

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.75  E-value=2.7e-17  Score=141.76  Aligned_cols=163  Identities=13%  Similarity=0.051  Sum_probs=114.7

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC---C----cccc------cchh----hcCCCceeEEE
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN---G----ATGL------LDLK----NRFPERLDVLQ   85 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~---~----~~~~------~~~~----~~~~~~~~~~~   85 (214)
                      ...++++++|||||+|+||++++++|+++|++  |+++++...   .    .+..      .+.+    ...+.++.++.
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~--V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~  119 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYE--VAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYV  119 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCCCe--EEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEE
Confidence            35578899999999999999999999999997  777654211   1    0000      0000    11123688999


Q ss_pred             ecCCCHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCC
Q 028056           86 LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGT  165 (214)
Q Consensus        86 ~Dl~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  165 (214)
                      +|++|.+.+.+++++.     ++|+|||+|+...        .+....++++++..+++|+.|++.+++++...-.+   
T Consensus       120 ~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~--------~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~---  183 (442)
T PLN02572        120 GDICDFEFLSEAFKSF-----EPDAVVHFGEQRS--------APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPD---  183 (442)
T ss_pred             CCCCCHHHHHHHHHhC-----CCCEEEECCCccc--------ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCC---
Confidence            9999999998888864     6899999997532        22334445566777899999999999987653111   


Q ss_pred             CCCCCceEEEEeecCcccCCC---------------------CCCCCcchhhhhHHHHHHHHHHh
Q 028056          166 GIERDVAVVANLSARVGSIGD---------------------NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       166 ~~~~~~~~iv~iss~~~~~~~---------------------~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                            .++|++||...+...                     .+..+...|+.+|.+.+.+.+.+
T Consensus       184 ------~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~  242 (442)
T PLN02572        184 ------CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFT  242 (442)
T ss_pred             ------ccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHH
Confidence                  178989987533210                     01233468999999999998876

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.75  E-value=4e-17  Score=129.53  Aligned_cols=157  Identities=16%  Similarity=0.120  Sum_probs=123.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc--cccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +++|||||.|.||.+.++.+.++..+.+|+.++.=.....  .+....  ...++.++++|+.|.+.+.+++++-     
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~--~~~~~~fv~~DI~D~~~v~~~~~~~-----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE--DSPRYRFVQGDICDRELVDRLFKEY-----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh--cCCCceEEeccccCHHHHHHHHHhc-----
Confidence            4789999999999999999999988756888876443322  122222  1358999999999999999998866     


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc--cC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG--SI  184 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~--~~  184 (214)
                      ++|++||-|+-.           ..|.+.+.....+++|+.|++.+++++..+..+         .+++.||+.-.  ..
T Consensus        74 ~~D~VvhfAAES-----------HVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---------frf~HISTDEVYG~l  133 (340)
T COG1088          74 QPDAVVHFAAES-----------HVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---------FRFHHISTDEVYGDL  133 (340)
T ss_pred             CCCeEEEechhc-----------cccccccChhhhhhcchHHHHHHHHHHHHhccc---------ceEEEeccccccccc
Confidence            799999999743           356677788889999999999999999877654         38899998532  22


Q ss_pred             --------CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 --------GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 --------~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                              ...|..+.++|+||||+-+++++++ .-|
T Consensus       134 ~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY  170 (340)
T COG1088         134 GLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY  170 (340)
T ss_pred             cCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc
Confidence                    1235677899999999999999998 443

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.73  E-value=9.5e-17  Score=134.62  Aligned_cols=163  Identities=12%  Similarity=0.098  Sum_probs=112.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh-cCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      |++|||||+|+||.+++++|+++|+. .+++.++.... ........ ....++.++.+|++|.+++++++++.     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~-~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSD-AVVVVDKLTYA-GNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCC-EEEEEecCccc-cchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            58999999999999999999999987 34455554321 11111111 11236788899999999988887753     6


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC---
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI---  184 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~---  184 (214)
                      +|+|||+||...           .+.+.+.+.+.+++|+.+++.+++++.+.+..... ......++|++||...+.   
T Consensus        75 ~D~Vih~A~~~~-----------~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~-~~~~~~~~i~~SS~~vyg~~~  142 (355)
T PRK10217         75 PDCVMHLAAESH-----------VDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTE-DKKSAFRFHHISTDEVYGDLH  142 (355)
T ss_pred             CCEEEECCcccC-----------cchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccc-cccCceEEEEecchhhcCCCC
Confidence            899999998643           12233566788999999999999999875421100 000113899999854221   


Q ss_pred             -------CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 -------GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 -------~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                             ...+..+...|+.||.+.+.+++.++
T Consensus       143 ~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~  175 (355)
T PRK10217        143 STDDFFTETTPYAPSSPYSASKASSDHLVRAWL  175 (355)
T ss_pred             CCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHH
Confidence                   01133456789999999999999873

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.73  E-value=4.7e-18  Score=136.76  Aligned_cols=149  Identities=18%  Similarity=0.126  Sum_probs=109.7

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-C-CCce----eEEEecCCCHHHHHHHHHHHHHH
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-F-PERL----DVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-~-~~~~----~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ||||||+|.||+++++++++.+.. .|+++++++.++-.+...+.. . ..++    ..+.+|+.|.+.+.+++++.   
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~-~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~---   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPK-KLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY---   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-S-EEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-----
T ss_pred             CEEEccccHHHHHHHHHHHhcCCC-eEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc---
Confidence            799999999999999999999987 799999999887666555532 1 2233    34578999999999998866   


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                        ++|+++|.|+.-.        -++.+   +.+.+.+++|+.|+..+++++..+-.+          ++|++|+.-+..
T Consensus        77 --~pdiVfHaAA~Kh--------Vpl~E---~~p~eav~tNv~GT~nv~~aa~~~~v~----------~~v~ISTDKAv~  133 (293)
T PF02719_consen   77 --KPDIVFHAAALKH--------VPLME---DNPFEAVKTNVLGTQNVAEAAIEHGVE----------RFVFISTDKAVN  133 (293)
T ss_dssp             --T-SEEEE--------------HHHHC---CCHHHHHHHHCHHHHHHHHHHHHTT-S----------EEEEEEECGCSS
T ss_pred             --CCCEEEEChhcCC--------CChHH---hCHHHHHHHHHHHHHHHHHHHHHcCCC----------EEEEccccccCC
Confidence              8999999998753        33444   456778999999999999998765332          999999988866


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAMDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la~~  212 (214)
                      |      ...||+||...+.++++++..
T Consensus       134 P------tnvmGatKrlaE~l~~~~~~~  155 (293)
T PF02719_consen  134 P------TNVMGATKRLAEKLVQAANQY  155 (293)
T ss_dssp             --------SHHHHHHHHHHHHHHHHCCT
T ss_pred             C------CcHHHHHHHHHHHHHHHHhhh
Confidence            6      269999999999999988653

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.73  E-value=1.4e-17  Score=132.66  Aligned_cols=128  Identities=23%  Similarity=0.293  Sum_probs=104.2

Q ss_pred             HHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECccccCCCCC
Q 028056           44 FAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV  123 (214)
Q Consensus        44 ~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~  123 (214)
                      +|++|+++|++  |++.+|+.++.+           ...+++||++|.++++++++++.   +++|+||||||...    
T Consensus         1 ~a~~l~~~G~~--Vv~~~r~~~~~~-----------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~----   60 (241)
T PRK12428          1 TARLLRFLGAR--VIGVDRREPGMT-----------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG----   60 (241)
T ss_pred             ChHHHHhCCCE--EEEEeCCcchhh-----------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence            47899999997  999999876531           13467899999999999998874   58999999999642    


Q ss_pred             CCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC-----------------
Q 028056          124 LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-----------------  186 (214)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-----------------  186 (214)
                                 .+.+++.+++|+.+++.+++.++|+|.+.  |      +||++||..+....                 
T Consensus        61 -----------~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g------~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~  121 (241)
T PRK12428         61 -----------TAPVELVARVNFLGLRHLTEALLPRMAPG--G------AIVNVASLAGAEWPQRLELHKALAATASFDE  121 (241)
T ss_pred             -----------CCCHHHhhhhchHHHHHHHHHHHHhccCC--c------EEEEeCcHHhhccccchHHHHhhhccchHHH
Confidence                       12478899999999999999999998643  3      99999999876311                 


Q ss_pred             -------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 -------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 -------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                             .+.++...|++||+++++++++++
T Consensus       122 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la  152 (241)
T PRK12428        122 GAAWLAAHPVALATGYQLSKEALILWTMRQA  152 (241)
T ss_pred             HHHhhhccCCCcccHHHHHHHHHHHHHHHHH
Confidence                   135677899999999999999987

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.73  E-value=6.2e-17  Score=134.96  Aligned_cols=156  Identities=17%  Similarity=0.092  Sum_probs=111.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccc--hhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .++++++++||||+|+||++++++|+++|++  |++++|+.........  .... ..++.++.+|++|.+++.++++  
T Consensus         5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~--   79 (338)
T PLN00198          5 TPTGKKTACVIGGTGFLASLLIKLLLQKGYA--VNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIA--   79 (338)
T ss_pred             cCCCCCeEEEECCchHHHHHHHHHHHHCCCE--EEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHh--
Confidence            4567899999999999999999999999997  8878887654322111  1111 1358889999999988877665  


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                           ++|+|||+|+...       .   .  ..+.....+++|+.++..+++++.+..   +.+      ++|++||..
T Consensus        80 -----~~d~vih~A~~~~-------~---~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~~~------~~v~~SS~~  133 (338)
T PLN00198         80 -----GCDLVFHVATPVN-------F---A--SEDPENDMIKPAIQGVHNVLKACAKAK---SVK------RVILTSSAA  133 (338)
T ss_pred             -----cCCEEEEeCCCCc-------c---C--CCChHHHHHHHHHHHHHHHHHHHHhcC---Ccc------EEEEeecce
Confidence                 5799999998431       0   0  112234467889999999999876531   222      899999975


Q ss_pred             ccCCC---------------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGD---------------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~---------------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+...                     .+.++...|+.||.+.+.+++.++
T Consensus       134 ~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~  183 (338)
T PLN00198        134 AVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFA  183 (338)
T ss_pred             eeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHH
Confidence            44311                     012345679999999999998874

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.73  E-value=1.8e-16  Score=131.80  Aligned_cols=169  Identities=14%  Similarity=0.102  Sum_probs=114.2

Q ss_pred             ccCcEEEEecCCCchhHH--HHHHHHhcCCCcEEEEeecCCCCcc------------cccchhhcCCCceeEEEecCCCH
Q 028056           26 WKGGVSLVQGASRGIGLE--FAKQLLEKNDKGCVIATCRNPNGAT------------GLLDLKNRFPERLDVLQLDLTVE   91 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~--~a~~l~~~g~~~~vi~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~Dl~~~   91 (214)
                      -.+|++||||+++|||.+  +|+.| +.|++  ++++++..+..+            .+.+...+.+..+..++||++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~--Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD--TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCe--EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCH
Confidence            346999999999999999  89999 99998  777775432211            23334444456678899999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccccCCCCCCC---------C-----Ccchh-------------hccHhhhhhheee
Q 028056           92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQ---------P-----ETTLN-------------KVEKSSLMLAYEV  144 (214)
Q Consensus        92 ~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~---------~-----~~~~~-------------~~~~~~~~~~~~~  144 (214)
                      ++++++++++.+.+|++|+||||++.....+...         |     .++..             ..+.++++..+  
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv--  193 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV--  193 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH--
Confidence            9999999999999999999999999874322000         0     01111             22333333222  


Q ss_pred             echhH---HHH--HHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCc--chhhhhHHHHHHHHHHhc
Q 028056          145 NAVGP---ILV--IKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW--HSYRASKAALNQCKILAM  210 (214)
Q Consensus       145 n~~~~---~~l--~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~--~~Y~asKaa~~~~~~~la  210 (214)
                      ++||.   ...  .+...+.|.+.        ++++.+|++.....   .|.+  ...+.+|+++++-++.|+
T Consensus       194 ~vMggedw~~Wi~al~~a~lla~g--------~~~va~TY~G~~~t---~p~Y~~g~mG~AKa~LE~~~r~La  255 (398)
T PRK13656        194 KVMGGEDWELWIDALDEAGVLAEG--------AKTVAYSYIGPELT---HPIYWDGTIGKAKKDLDRTALALN  255 (398)
T ss_pred             HhhccchHHHHHHHHHhcccccCC--------cEEEEEecCCccee---ecccCCchHHHHHHHHHHHHHHHH
Confidence            33333   222  33334444332        39999999776655   3444  477999999999999983

>PLN02240 UDP-glucose 4-epimerase

Probab=99.73  E-value=7e-17  Score=135.18  Aligned_cols=159  Identities=20%  Similarity=0.192  Sum_probs=114.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc----ccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG----LLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      |.+++|+++||||+|+||.+++++|+++|++  |++.+|.......    ..+.....+.++.++.+|++|++++.++++
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~   78 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYK--VVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFA   78 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHH
Confidence            4578899999999999999999999999987  8888765432211    111111123468889999999999988877


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      +.     .+|+|||+|+...       ..    ...+.+.+.+++|+.++..+++++.    +.+..      ++|++||
T Consensus        79 ~~-----~~d~vih~a~~~~-------~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~------~~v~~Ss  132 (352)
T PLN02240         79 ST-----RFDAVIHFAGLKA-------VG----ESVAKPLLYYDNNLVGTINLLEVMA----KHGCK------KLVFSSS  132 (352)
T ss_pred             hC-----CCCEEEEccccCC-------cc----ccccCHHHHHHHHHHHHHHHHHHHH----HcCCC------EEEEEcc
Confidence            53     7899999998643       11    1224566789999999999988653    33322      8999999


Q ss_pred             CcccCC--------CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          180 RVGSIG--------DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       180 ~~~~~~--------~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ...+..        ..+..+...|+.+|.+.+.+.+.++
T Consensus       133 ~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  171 (352)
T PLN02240        133 ATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIH  171 (352)
T ss_pred             HHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            643211        1123456799999999999998773

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.72  E-value=8.9e-17  Score=134.84  Aligned_cols=161  Identities=19%  Similarity=0.166  Sum_probs=111.8

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ..+++++|||||+|+||.+++++|+++|++  |++++|+.+..+.+.+.... +.++.++.+|+++.+++.++++     
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-----   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYT--VHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK-----   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-----
Confidence            346789999999999999999999999997  88888876543333222221 3568899999999988877764     


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhh--hhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSL--MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                        .+|+|||+|+....      .......+++.+  .+.++.|+.++..+++++.+..   +.      .++|++||...
T Consensus        79 --~~d~Vih~A~~~~~------~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~------~~~v~~SS~~v  141 (353)
T PLN02896         79 --GCDGVFHVAASMEF------DVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TV------KRVVFTSSIST  141 (353)
T ss_pred             --CCCEEEECCccccC------CccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---Cc------cEEEEEechhh
Confidence              57999999997531      110111222322  3456777899999999886542   12      28999999754


Q ss_pred             cCCC---------------CC-------CCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGD---------------NR-------LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~---------------~~-------~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +...               .+       .+....|+.||.+.+.+.+.++
T Consensus       142 yg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  191 (353)
T PLN02896        142 LTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYA  191 (353)
T ss_pred             ccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHH
Confidence            4210               00       0122479999999999998774

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.71  E-value=2.2e-16  Score=130.78  Aligned_cols=154  Identities=21%  Similarity=0.123  Sum_probs=110.9

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh--cCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      -.||+++||||+|+||.+++++|+++|++  |++..|+....+...+...  ....++.++.+|++|.+++.++++    
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYT--VKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE----   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh----
Confidence            46799999999999999999999999997  8888888765443332221  113468899999999998887776    


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                         .+|++||+|+...       .. .    .+...+.+++|+.|+..+++++...   .+.      .+||++||....
T Consensus        77 ---~~d~vih~A~~~~-------~~-~----~~~~~~~~~~nv~gt~~ll~~~~~~---~~v------~rvV~~SS~~~~  132 (322)
T PLN02986         77 ---GCDAVFHTASPVF-------FT-V----KDPQTELIDPALKGTINVLNTCKET---PSV------KRVILTSSTAAV  132 (322)
T ss_pred             ---CCCEEEEeCCCcC-------CC-C----CCchhhhhHHHHHHHHHHHHHHHhc---CCc------cEEEEecchhhe
Confidence               5899999998542       11 0    1122456889999999999986532   122      289999998643


Q ss_pred             C-CCCC------------C------CCcchhhhhHHHHHHHHHHh
Q 028056          184 I-GDNR------------L------GGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       184 ~-~~~~------------~------~~~~~Y~asKaa~~~~~~~l  209 (214)
                      . +..+            .      .....|+.+|.+.+.+.+.+
T Consensus       133 ~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~  177 (322)
T PLN02986        133 LFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEF  177 (322)
T ss_pred             ecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHH
Confidence            2 1100            0      12367999999999988876

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.70  E-value=3.2e-16  Score=124.88  Aligned_cols=148  Identities=20%  Similarity=0.180  Sum_probs=112.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      .++|||||+|-||++++++|++.|++  |++++.-.....+.....     ...+++.|+.|.+.++++|++-     ++
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~--vvV~DNL~~g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~-----~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHE--VVVLDNLSNGHKIALLKL-----QFKFYEGDLLDRALLTAVFEEN-----KI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCe--EEEEecCCCCCHHHhhhc-----cCceEEeccccHHHHHHHHHhc-----CC
Confidence            37999999999999999999999998  666655443322211111     1679999999999999999876     89


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC--
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~--  186 (214)
                      |.|||-||...           ...+.+...++++.|+.|+..|++++..+    +..      .|||-| .+.++|.  
T Consensus        69 daViHFAa~~~-----------VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~----gv~------~~vFSS-tAavYG~p~  126 (329)
T COG1087          69 DAVVHFAASIS-----------VGESVQNPLKYYDNNVVGTLNLIEAMLQT----GVK------KFIFSS-TAAVYGEPT  126 (329)
T ss_pred             CEEEECccccc-----------cchhhhCHHHHHhhchHhHHHHHHHHHHh----CCC------EEEEec-chhhcCCCC
Confidence            99999999754           34567888899999999999999987544    332      666544 4555543  


Q ss_pred             -------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 -------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 -------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                             .+..+..+|+.||.++|.+.+.++
T Consensus       127 ~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~  157 (329)
T COG1087         127 TSPISETSPLAPINPYGRSKLMSEEILRDAA  157 (329)
T ss_pred             CcccCCCCCCCCCCcchhHHHHHHHHHHHHH
Confidence                   234566799999999999998774

>PLN02650 dihydroflavonol-4-reductase

Probab=99.70  E-value=1.7e-16  Score=132.98  Aligned_cols=155  Identities=17%  Similarity=0.109  Sum_probs=110.8

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc--CCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      -+.|++|||||+|.||.+++++|+++|++  |++++|+....+........  ...++.++.+|++|.+.+.++++    
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~----   76 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGYT--VRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR----   76 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCCE--EEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh----
Confidence            35689999999999999999999999997  88888877654433222211  12357889999999988877765    


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                         .+|+|||+|+...       ..   ..  +...+.+++|+.++..+++++.+...   .      .+||++||....
T Consensus        77 ---~~d~ViH~A~~~~-------~~---~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~---~------~r~v~~SS~~~~  132 (351)
T PLN02650         77 ---GCTGVFHVATPMD-------FE---SK--DPENEVIKPTVNGMLSIMKACAKAKT---V------RRIVFTSSAGTV  132 (351)
T ss_pred             ---CCCEEEEeCCCCC-------CC---CC--CchhhhhhHHHHHHHHHHHHHHhcCC---c------eEEEEecchhhc
Confidence               4799999998542       11   11  12245688999999999999875421   1      289999997543


Q ss_pred             CCC---CC----------------CCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGD---NR----------------LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~---~~----------------~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+.   .+                ..+...|+.||.+.+.+.+.++
T Consensus       133 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  178 (351)
T PLN02650        133 NVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYA  178 (351)
T ss_pred             ccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHH
Confidence            221   00                0122479999999999998874

>PLN02214 cinnamoyl-CoA reductase

Probab=99.70  E-value=1.9e-16  Score=132.37  Aligned_cols=149  Identities=21%  Similarity=0.111  Sum_probs=109.8

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc-cchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +++|+++||||+|+||.+++++|+++|++  |++++|+.+..... .........++.++.+|++|.+++.++++     
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYT--VKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCE--EEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-----
Confidence            46789999999999999999999999997  88888876542211 11111112358889999999998887776     


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                        .+|+|||+|+...                +++.+.+++|+.++..+++++...    +..      ++|++||..++.
T Consensus        81 --~~d~Vih~A~~~~----------------~~~~~~~~~nv~gt~~ll~aa~~~----~v~------r~V~~SS~~avy  132 (342)
T PLN02214         81 --GCDGVFHTASPVT----------------DDPEQMVEPAVNGAKFVINAAAEA----KVK------RVVITSSIGAVY  132 (342)
T ss_pred             --cCCEEEEecCCCC----------------CCHHHHHHHHHHHHHHHHHHHHhc----CCC------EEEEeccceeee
Confidence              5899999998431                134567889999999999987542    222      899999975443


Q ss_pred             CCC------------------CCCCcchhhhhHHHHHHHHHHh
Q 028056          185 GDN------------------RLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       185 ~~~------------------~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      +..                  +......|+.+|.+.+.+.+.+
T Consensus       133 g~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~  175 (342)
T PLN02214        133 MDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWET  175 (342)
T ss_pred             ccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHH
Confidence            210                  0013457999999999999876

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.68  E-value=1.1e-15  Score=125.59  Aligned_cols=154  Identities=18%  Similarity=0.110  Sum_probs=108.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC--cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +++||||+|+||.+++++|++.|....|++.+|....  .+.+....  ...++.++.+|++|++++.++++..     +
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~-----~   73 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE--DNPRYRFVKGDIGDRELVSRLFTEH-----Q   73 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc--cCCCcEEEEcCCcCHHHHHHHHhhc-----C
Confidence            4899999999999999999998843247777764321  11122111  1236788999999999998887753     6


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC--
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG--  185 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~--  185 (214)
                      +|+|||+|+...           .+.+.+.++..+++|+.++..+++++...+.+         .++|++||......  
T Consensus        74 ~d~vi~~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---------~~~i~~Ss~~v~g~~~  133 (317)
T TIGR01181        74 PDAVVHFAAESH-----------VDRSISGPAAFIETNVVGTYTLLEAVRKYWHE---------FRFHHISTDEVYGDLE  133 (317)
T ss_pred             CCEEEEcccccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC---------ceEEEeeccceeCCCC
Confidence            899999998653           12233455677899999999999887654321         27899998542211  


Q ss_pred             -------CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 -------DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 -------~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                             ..+..+...|+.+|.+.+.+++.++
T Consensus       134 ~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~  165 (317)
T TIGR01181       134 KGDAFTETTPLAPSSPYSASKAASDHLVRAYH  165 (317)
T ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHHHHHHHH
Confidence                   1123345689999999999998773

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.67  E-value=1.5e-15  Score=127.15  Aligned_cols=161  Identities=13%  Similarity=0.107  Sum_probs=110.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC--CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      ++|||||+|+||.+++++|+++|.+ .|+..++...  ..+......  .+.++.++.+|++|.+++.+++++.     .
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVS--DSERYVFEHADICDRAELDRIFAQH-----Q   73 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCC-eEEEecCCCccchHHHHHhcc--cCCceEEEEecCCCHHHHHHHHHhc-----C
Confidence            5899999999999999999999986 3554554321  111111111  1245778999999999998888753     7


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC--
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG--  185 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~--  185 (214)
                      +|+|||+|+...       .    +...+..++.+++|+.|+..+++++.++|+....+ .....++|++||......  
T Consensus        74 ~d~vih~A~~~~-------~----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~-~~~~~~~i~~SS~~vyg~~~  141 (352)
T PRK10084         74 PDAVMHLAAESH-------V----DRSITGPAAFIETNIVGTYVLLEAARNYWSALDED-KKNAFRFHHISTDEVYGDLP  141 (352)
T ss_pred             CCEEEECCcccC-------C----cchhcCchhhhhhhhHHHHHHHHHHHHhccccccc-cccceeEEEecchhhcCCCC
Confidence            999999998643       1    11122346689999999999999998876432110 011238899998643221  


Q ss_pred             ----------------CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 ----------------DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ----------------~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                                      ..+..+...|+.+|.+.+.+++.++
T Consensus       142 ~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  182 (352)
T PRK10084        142 HPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWL  182 (352)
T ss_pred             ccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHH
Confidence                            0123455799999999999999873

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.66  E-value=8.8e-16  Score=133.80  Aligned_cols=126  Identities=16%  Similarity=0.215  Sum_probs=95.2

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-----C----CCceeEEEecCCCHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-----F----PERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-----~----~~~~~~~~~Dl~~~~~v~~   96 (214)
                      .+||+++||||+|+||++++++|+++|++  |++++|+.++++.+.+.+..     .    ..++.++.+|++|.+++.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~--Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~  155 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFR--VRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP  155 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence            46899999999999999999999999997  99999998776544332211     1    1358899999999988765


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      .       ++.+|+||||+|...        ..     ..++...+++|+.|+..+++++...    +.+      +||+
T Consensus       156 a-------LggiDiVVn~AG~~~--------~~-----v~d~~~~~~VN~~Gt~nLl~Aa~~a----gVg------RIV~  205 (576)
T PLN03209        156 A-------LGNASVVICCIGASE--------KE-----VFDVTGPYRIDYLATKNLVDAATVA----KVN------HFIL  205 (576)
T ss_pred             H-------hcCCCEEEEcccccc--------cc-----ccchhhHHHHHHHHHHHHHHHHHHh----CCC------EEEE
Confidence            3       357899999998642        11     1135566888999998888887533    333      9999


Q ss_pred             eecCccc
Q 028056          177 LSARVGS  183 (214)
Q Consensus       177 iss~~~~  183 (214)
                      +||..+.
T Consensus       206 VSSiga~  212 (576)
T PLN03209        206 VTSLGTN  212 (576)
T ss_pred             Eccchhc
Confidence            9998763

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.65  E-value=3.2e-15  Score=125.27  Aligned_cols=158  Identities=14%  Similarity=0.074  Sum_probs=111.2

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhh----cCCCceeEEEecCCCHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN----RFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~----~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      +...+++++++||||+|.||.+++++|.++|++  |+.++|....... ......    ....++.++.+|+.|.+.+.+
T Consensus         9 ~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~--V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~   86 (348)
T PRK15181          9 TKLVLAPKRWLITGVAGFIGSGLLEELLFLNQT--VIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQK   86 (348)
T ss_pred             hcccccCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHH
Confidence            456788899999999999999999999999987  8888876543221 111111    112357889999999888776


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      +++       .+|+|||.|+...        .+   ...++..+.+++|+.|+..+++.+..    .+..      ++|+
T Consensus        87 ~~~-------~~d~ViHlAa~~~--------~~---~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~------~~v~  138 (348)
T PRK15181         87 ACK-------NVDYVLHQAALGS--------VP---RSLKDPIATNSANIDGFLNMLTAARD----AHVS------SFTY  138 (348)
T ss_pred             Hhh-------CCCEEEECccccC--------ch---hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCC------eEEE
Confidence            665       4799999998643        11   11123345688999999999998743    2322      8999


Q ss_pred             eecCcccCC--CC------CCCCcchhhhhHHHHHHHHHHh
Q 028056          177 LSARVGSIG--DN------RLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       177 iss~~~~~~--~~------~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      +||......  ..      +..+...|+.+|.+.+.+.+.+
T Consensus       139 ~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~  179 (348)
T PRK15181        139 AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVF  179 (348)
T ss_pred             eechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Confidence            998643321  10      1224468999999999988876

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.64  E-value=1.8e-15  Score=125.15  Aligned_cols=153  Identities=19%  Similarity=0.172  Sum_probs=107.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh--cCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++|++|||||+|+||++++++|+++|++  |++++|+............  ....++.++.+|++|++.+.++++     
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYT--VKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-----   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCE--EEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-----
Confidence            4689999999999999999999999997  8888887654332221111  112468899999999988877765     


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc-
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS-  183 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~-  183 (214)
                        .+|+|||+|+...       . ..  ..  ...+.+++|+.++..+++++....   +..      ++|++||..+. 
T Consensus        76 --~~d~Vih~A~~~~-------~-~~--~~--~~~~~~~~nv~gt~~ll~a~~~~~---~~~------~~v~~SS~~~~~  132 (322)
T PLN02662         76 --GCEGVFHTASPFY-------H-DV--TD--PQAELIDPAVKGTLNVLRSCAKVP---SVK------RVVVTSSMAAVA  132 (322)
T ss_pred             --CCCEEEEeCCccc-------C-CC--CC--hHHHHHHHHHHHHHHHHHHHHhCC---CCC------EEEEccCHHHhc
Confidence              5799999998542       0 00  01  113568899999999999876431   222      89999997532 


Q ss_pred             CCCCC------------C-C-----CcchhhhhHHHHHHHHHHh
Q 028056          184 IGDNR------------L-G-----GWHSYRASKAALNQCKILA  209 (214)
Q Consensus       184 ~~~~~------------~-~-----~~~~Y~asKaa~~~~~~~l  209 (214)
                      .+..+            . +     ....|+.+|.+.+.+.+.+
T Consensus       133 y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~  176 (322)
T PLN02662        133 YNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKF  176 (322)
T ss_pred             CCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHH
Confidence            21100            0 1     1247999999999988765

>PLN02583 cinnamoyl-CoA reductase

Probab=99.63  E-value=3.8e-15  Score=122.24  Aligned_cols=153  Identities=17%  Similarity=0.008  Sum_probs=107.0

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc--cccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      -.+|+++||||+|+||++++++|+++|++  |+++.|+....+  .....+...+.++.++.+|++|.+++.+++.    
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~--V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~----   77 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYT--VHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK----   77 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCE--EEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc----
Confidence            35689999999999999999999999997  888888643211  1111111123468889999999988866554    


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                         ..|.++|.++...         .   . .+.+++.+++|+.|++.+++++.+.+.   .      .+||++||..+.
T Consensus        78 ---~~d~v~~~~~~~~---------~---~-~~~~~~~~~~nv~gt~~ll~aa~~~~~---v------~riV~~SS~~a~  132 (297)
T PLN02583         78 ---GCSGLFCCFDPPS---------D---Y-PSYDEKMVDVEVRAAHNVLEACAQTDT---I------EKVVFTSSLTAV  132 (297)
T ss_pred             ---CCCEEEEeCccCC---------c---c-cccHHHHHHHHHHHHHHHHHHHHhcCC---c------cEEEEecchHhe
Confidence               5788888765321         1   1 123567899999999999999876531   1      299999998654


Q ss_pred             CCC--C-----CC------CC------cchhhhhHHHHHHHHHHh
Q 028056          184 IGD--N-----RL------GG------WHSYRASKAALNQCKILA  209 (214)
Q Consensus       184 ~~~--~-----~~------~~------~~~Y~asKaa~~~~~~~l  209 (214)
                      ...  .     +.      +.      ...|+.||...+.+...+
T Consensus       133 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~  177 (297)
T PLN02583        133 IWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWAL  177 (297)
T ss_pred             ecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHH
Confidence            211  0     00      00      116999999999988766

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.62  E-value=7.9e-15  Score=122.12  Aligned_cols=153  Identities=18%  Similarity=0.127  Sum_probs=106.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-CCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      +++||||+|+||.+++++|+++|.+  |++++|.............. .+.++.++.+|++|.+++.++++.     .++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~   74 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHD--VVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAI   74 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCe--EEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCC
Confidence            6899999999999999999999997  77777653332221111111 134577889999999998887763     269


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC--
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~--  186 (214)
                      |+|||+|+...       ...    ..+...+.+++|+.++..+++++.    +.+.+      ++|++||...+...  
T Consensus        75 d~vvh~a~~~~-------~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~------~~v~~Ss~~~yg~~~~  133 (338)
T PRK10675         75 DTVIHFAGLKA-------VGE----SVQKPLEYYDNNVNGTLRLISAMR----AANVK------NLIFSSSATVYGDQPK  133 (338)
T ss_pred             CEEEECCcccc-------ccc----hhhCHHHHHHHHHHHHHHHHHHHH----HcCCC------EEEEeccHHhhCCCCC
Confidence            99999998653       111    112334567889999999888653    33333      89999996432210  


Q ss_pred             ------CCC-CCcchhhhhHHHHHHHHHHhc
Q 028056          187 ------NRL-GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ------~~~-~~~~~Y~asKaa~~~~~~~la  210 (214)
                            .+. .+...|+.+|.+.+.+++.++
T Consensus       134 ~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~  164 (338)
T PRK10675        134 IPYVESFPTGTPQSPYGKSKLMVEQILTDLQ  164 (338)
T ss_pred             CccccccCCCCCCChhHHHHHHHHHHHHHHH
Confidence                  011 246799999999999999874

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.60  E-value=1.5e-14  Score=119.40  Aligned_cols=152  Identities=20%  Similarity=0.202  Sum_probs=106.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      ++|||||+|+||..++++|+++|++  |++.++.............+. .++.++.+|+++.+++.++++.     +++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~--V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHE--VVVLDNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEE-----HKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCe--EEEEeCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence            4799999999999999999999997  777665433211111111111 2577889999999999888763     3799


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC---
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD---  186 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~---  186 (214)
                      ++|||||...       ..    ...+...+.++.|+.++..+++.+.    +.+..      ++|++||.......   
T Consensus        73 ~vv~~ag~~~-------~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~------~~v~~ss~~~~g~~~~~  131 (328)
T TIGR01179        73 AVIHFAGLIA-------VG----ESVQDPLKYYRNNVVNTLNLLEAMQ----QTGVK------KFIFSSSAAVYGEPSSI  131 (328)
T ss_pred             EEEECccccC-------cc----hhhcCchhhhhhhHHHHHHHHHHHH----hcCCC------EEEEecchhhcCCCCCC
Confidence            9999999753       11    1223445678899999999988754    33322      88888886432211   


Q ss_pred             -----CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 -----NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 -----~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                           .+..+...|+.+|++++.+++.++
T Consensus       132 ~~~e~~~~~~~~~y~~sK~~~e~~~~~~~  160 (328)
T TIGR01179       132 PISEDSPLGPINPYGRSKLMSERILRDLS  160 (328)
T ss_pred             CccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence                 112345789999999999999874

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.60  E-value=1.8e-14  Score=115.90  Aligned_cols=154  Identities=15%  Similarity=0.096  Sum_probs=116.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc---ccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG---LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +++||||||+|-||.+.+.+|.++|+. ++++..-+...++.   +.++.. .+.++.+++.|+.|.+.++++|++.   
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~-v~~vDNl~n~~~~sl~r~~~l~~-~~~~v~f~~~Dl~D~~~L~kvF~~~---   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYG-VVIVDNLNNSYLESLKRVRQLLG-EGKSVFFVEGDLNDAEALEKLFSEV---   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCc-EEEEecccccchhHHHHHHHhcC-CCCceEEEEeccCCHHHHHHHHhhc---
Confidence            579999999999999999999999998 45554444443333   222222 2478999999999999999999988   


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                        .+|.|+|-|+...           ...+.+....+++.|+.|++.++..+..+-    ..      .+|+.||...+.
T Consensus        77 --~fd~V~Hfa~~~~-----------vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~----~~------~~V~sssatvYG  133 (343)
T KOG1371|consen   77 --KFDAVMHFAALAA-----------VGESMENPLSYYHNNIAGTLNLLEVMKAHN----VK------ALVFSSSATVYG  133 (343)
T ss_pred             --CCceEEeehhhhc-----------cchhhhCchhheehhhhhHHHHHHHHHHcC----Cc------eEEEecceeeec
Confidence              6999999998754           234556668899999999999999876543    22      777777754332


Q ss_pred             CC--------CCCC-CcchhhhhHHHHHHHHHHh
Q 028056          185 GD--------NRLG-GWHSYRASKAALNQCKILA  209 (214)
Q Consensus       185 ~~--------~~~~-~~~~Y~asKaa~~~~~~~l  209 (214)
                      .+        .+.. +...|+.+|.+++...+.+
T Consensus       134 ~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~  167 (343)
T KOG1371|consen  134 LPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDY  167 (343)
T ss_pred             CcceeeccCcCCCCCCCCcchhhhHHHHHHHHhh
Confidence            11        1233 6789999999999988876

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.59  E-value=2e-14  Score=118.92  Aligned_cols=144  Identities=17%  Similarity=0.125  Sum_probs=106.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ++++||||+|+||..++++|+++|++  |++++|+++......      ..++.++.+|++|.+++.++++       .+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~------~~~~~~~~~D~~~~~~l~~~~~-------~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEE--VRVLVRPTSDRRNLE------GLDVEIVEGDLRDPASLRKAVA-------GC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCE--EEEEEecCccccccc------cCCceEEEeeCCCHHHHHHHHh-------CC
Confidence            37999999999999999999999987  999999876533221      2358889999999998877765       57


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC-C
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-N  187 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-~  187 (214)
                      |++||+++...       .      ..+.++..+++|+.++..+++++..    .+.+      ++|++||....... .
T Consensus        66 d~vi~~a~~~~-------~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~------~~v~~SS~~~~~~~~~  122 (328)
T TIGR03466        66 RALFHVAADYR-------L------WAPDPEEMYAANVEGTRNLLRAALE----AGVE------RVVYTSSVATLGVRGD  122 (328)
T ss_pred             CEEEEeceecc-------c------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCC------eEEEEechhhcCcCCC
Confidence            99999997532       0      1123455688899999999888753    2222      89999997554321 0


Q ss_pred             --------CC---CCcchhhhhHHHHHHHHHHhc
Q 028056          188 --------RL---GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 --------~~---~~~~~Y~asKaa~~~~~~~la  210 (214)
                              +.   .....|+.+|.+.+.+.+.++
T Consensus       123 ~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  156 (328)
T TIGR03466       123 GTPADETTPSSLDDMIGHYKRSKFLAEQAALEMA  156 (328)
T ss_pred             CCCcCccCCCCcccccChHHHHHHHHHHHHHHHH
Confidence                    01   113579999999999998773

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.55  E-value=6.6e-14  Score=118.89  Aligned_cols=153  Identities=20%  Similarity=0.207  Sum_probs=102.8

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCcccccchhh-cCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g-~~~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++.++||||||+|.||++++++|+++| .+  |++++|+.+..+....... ....++.++.+|++|.+.+.++++    
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~--V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~----   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHK--VLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK----   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCE--EEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh----
Confidence            445689999999999999999999984 65  8888887654332211110 112468899999999988877665    


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                         .+|+|||+|+...      + .... ..   ..+.+..|+.++..+++++...    + .      ++|++||...+
T Consensus        86 ---~~d~ViHlAa~~~------~-~~~~-~~---~~~~~~~n~~gt~~ll~aa~~~----~-~------r~v~~SS~~vY  140 (386)
T PLN02427         86 ---MADLTINLAAICT------P-ADYN-TR---PLDTIYSNFIDALPVVKYCSEN----N-K------RLIHFSTCEVY  140 (386)
T ss_pred             ---cCCEEEEcccccC------h-hhhh-hC---hHHHHHHHHHHHHHHHHHHHhc----C-C------EEEEEeeeeee
Confidence               4799999998643      1 1111 11   1223457999999888876422    2 2      89999996432


Q ss_pred             CC--------CCCC----------------------CCcchhhhhHHHHHHHHHHh
Q 028056          184 IG--------DNRL----------------------GGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       184 ~~--------~~~~----------------------~~~~~Y~asKaa~~~~~~~l  209 (214)
                      ..        ..+.                      .....|+.+|.+.+.+.+.+
T Consensus       141 g~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  196 (386)
T PLN02427        141 GKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAE  196 (386)
T ss_pred             CCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHH
Confidence            11        0000                      01246999999999998876

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.55  E-value=3.8e-14  Score=115.31  Aligned_cols=147  Identities=20%  Similarity=0.169  Sum_probs=107.0

Q ss_pred             EEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 028056           32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLL  111 (214)
Q Consensus        32 lItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~l  111 (214)
                      |||||+|.+|.+++++|+++|....|.+.++++.....  ..... .....++.+|++|.+++.++++       ..|+|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~-~~~~~~~~~Di~d~~~l~~a~~-------g~d~V   70 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK-SGVKEYIQGDITDPESLEEALE-------GVDVV   70 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc-ccceeEEEeccccHHHHHHHhc-------CCceE
Confidence            69999999999999999999942248777876654221  11111 1223389999999999998887       67999


Q ss_pred             EECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC---CC-
Q 028056          112 INASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG---DN-  187 (214)
Q Consensus       112 v~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~---~~-  187 (214)
                      ||+|+...      +..      ....++++++|+.|+-.+++++...    +..      ++|++||...+..   .. 
T Consensus        71 ~H~Aa~~~------~~~------~~~~~~~~~vNV~GT~nvl~aa~~~----~Vk------rlVytSS~~vv~~~~~~~~  128 (280)
T PF01073_consen   71 FHTAAPVP------PWG------DYPPEEYYKVNVDGTRNVLEAARKA----GVK------RLVYTSSISVVFDNYKGDP  128 (280)
T ss_pred             EEeCcccc------ccC------cccHHHHHHHHHHHHHHHHHHHHHc----CCC------EEEEEcCcceeEeccCCCC
Confidence            99998653      111      2345668999999999999988643    322      9999999876554   11 


Q ss_pred             ----------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 ----------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ----------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                                +......|+.||+..|.++....
T Consensus       129 ~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~  161 (280)
T PF01073_consen  129 IINGDEDTPYPSSPLDPYAESKALAEKAVLEAN  161 (280)
T ss_pred             cccCCcCCcccccccCchHHHHHHHHHHHHhhc
Confidence                      12245689999999999887763

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.54  E-value=1.5e-13  Score=124.45  Aligned_cols=158  Identities=11%  Similarity=0.084  Sum_probs=106.7

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh-cCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .++|+||||||+|.||++++++|+++|....|+..++.... ........ ....++.++.+|++|.+.+.+++..    
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT----   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chhhhhhhcccCCCeEEEECCCCChHHHHHHHhh----
Confidence            56789999999999999999999998543348888774311 11111111 1134688999999999887665432    


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                       ..+|+|||+|+...      ..     ...++..+.+++|+.++..+++++...   ...      .++|++||...+.
T Consensus        79 -~~~D~ViHlAa~~~------~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~v------kr~I~~SS~~vyg  137 (668)
T PLN02260         79 -EGIDTIMHFAAQTH------VD-----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQI------RRFIHVSTDEVYG  137 (668)
T ss_pred             -cCCCEEEECCCccC------ch-----hhhhCHHHHHHHHHHHHHHHHHHHHhc---CCC------cEEEEEcchHHhC
Confidence             27999999999753      11     111223456789999999998876432   112      2899999964322


Q ss_pred             CC-----------CCCCCcchhhhhHHHHHHHHHHh
Q 028056          185 GD-----------NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       185 ~~-----------~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      ..           .+..+...|+.+|.+.+.+.+.+
T Consensus       138 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~  173 (668)
T PLN02260        138 ETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAY  173 (668)
T ss_pred             CCccccccCccccCCCCCCCCcHHHHHHHHHHHHHH
Confidence            11           11224568999999999999876

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.53  E-value=2.4e-13  Score=115.65  Aligned_cols=146  Identities=15%  Similarity=0.095  Sum_probs=104.3

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc--cchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL--LDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++++||||+|.||.+++++|+++|++  |++++|+....+..  .+.......++.++.+|++|++++.++++..  
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~--V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~--  133 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYN--VVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE--  133 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh--
Confidence            45789999999999999999999999997  89999987653311  1111112346889999999999998888754  


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                       ..++|+||||++...        ..        ....+++|+.++..+++++.    +.+.+      ++|++||.+..
T Consensus       134 -~~~~D~Vi~~aa~~~--------~~--------~~~~~~vn~~~~~~ll~aa~----~~gv~------r~V~iSS~~v~  186 (390)
T PLN02657        134 -GDPVDVVVSCLASRT--------GG--------VKDSWKIDYQATKNSLDAGR----EVGAK------HFVLLSAICVQ  186 (390)
T ss_pred             -CCCCcEEEECCccCC--------CC--------CccchhhHHHHHHHHHHHHH----HcCCC------EEEEEeecccc
Confidence             126899999998431        10        01235677888877777653    33333      89999998653


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHH
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~  208 (214)
                      .+      ...|..+|..++...+.
T Consensus       187 ~p------~~~~~~sK~~~E~~l~~  205 (390)
T PLN02657        187 KP------LLEFQRAKLKFEAELQA  205 (390)
T ss_pred             Cc------chHHHHHHHHHHHHHHh
Confidence            22      34688899998887654

>PLN02686 cinnamoyl-CoA reductase

Probab=99.51  E-value=1.3e-13  Score=116.41  Aligned_cols=158  Identities=13%  Similarity=0.067  Sum_probs=106.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh--c---CCCceeEEEecCCCHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--R---FPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~--~---~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      .+.++|++|||||+|+||.+++++|+++|++  |+++.|+.+..+.+.++..  +   ...++.++.+|++|.+++.+++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~--V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i  126 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYS--VRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAF  126 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence            4577899999999999999999999999997  8777777654333322110  0   0125788999999999988877


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +       .+|.+||.++...      +... ..    ......++|+.++..+++++...   .+.      .++|++|
T Consensus       127 ~-------~~d~V~hlA~~~~------~~~~-~~----~~~~~~~~nv~gt~~llea~~~~---~~v------~r~V~~S  179 (367)
T PLN02686        127 D-------GCAGVFHTSAFVD------PAGL-SG----YTKSMAELEAKASENVIEACVRT---ESV------RKCVFTS  179 (367)
T ss_pred             H-------hccEEEecCeeec------cccc-cc----ccchhhhhhHHHHHHHHHHHHhc---CCc------cEEEEec
Confidence            6       3589999988653      1110 00    01233567889998888876432   122      2889999


Q ss_pred             cCc-ccCCC----C---------------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          179 ARV-GSIGD----N---------------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       179 s~~-~~~~~----~---------------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      |.. ...+.    .               +..+...|+.+|.+.+.+++.++
T Consensus       180 S~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~  231 (367)
T PLN02686        180 SLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAA  231 (367)
T ss_pred             cHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHH
Confidence            863 11110    0               01123579999999999998763

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.51  E-value=4.1e-13  Score=105.90  Aligned_cols=147  Identities=20%  Similarity=0.140  Sum_probs=109.5

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~  110 (214)
                      ||||||+|.||.+++++|.++|..  |+.+.|+..........     .++.++.+|+.|.+.++++++..     .+|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~--v~~~~~~~~~~~~~~~~-----~~~~~~~~dl~~~~~~~~~~~~~-----~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHE--VIVLSRSSNSESFEEKK-----LNVEFVIGDLTDKEQLEKLLEKA-----NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTE--EEEEESCSTGGHHHHHH-----TTEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCc--ccccccccccccccccc-----ceEEEEEeecccccccccccccc-----CceE
Confidence            799999999999999999999997  77778777543221111     17889999999999999998877     8999


Q ss_pred             EEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC----
Q 028056          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD----  186 (214)
Q Consensus       111 lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~----  186 (214)
                      +||+|+...           .....+.....++.|+.++..+++.+...-.    .      ++|++||.......    
T Consensus        69 vi~~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~----~------~~i~~sS~~~y~~~~~~~  127 (236)
T PF01370_consen   69 VIHLAAFSS-----------NPESFEDPEEIIEANVQGTRNLLEAAREAGV----K------RFIFLSSASVYGDPDGEP  127 (236)
T ss_dssp             EEEEBSSSS-----------HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT----S------EEEEEEEGGGGTSSSSSS
T ss_pred             EEEeecccc-----------ccccccccccccccccccccccccccccccc----c------cccccccccccccccccc
Confidence            999998642           1222355566778888888888887754322    2      89999995433221    


Q ss_pred             ----CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 ----NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ----~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                          .+..+...|+.+|...+.+.+.+.
T Consensus       128 ~~e~~~~~~~~~Y~~~K~~~e~~~~~~~  155 (236)
T PF01370_consen  128 IDEDSPINPLSPYGASKRAAEELLRDYA  155 (236)
T ss_dssp             BETTSGCCHSSHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccc
Confidence                112345779999999999988774

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.50  E-value=2.7e-13  Score=111.41  Aligned_cols=133  Identities=18%  Similarity=0.162  Sum_probs=97.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      ++|||||+|.||.+++++|.++| +  |+.++|...                 .+..|++|.+.+.+++++.     ++|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~--V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~-----~~D   56 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-N--LIALDVHST-----------------DYCGDFSNPEGVAETVRKI-----RPD   56 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-C--EEEeccccc-----------------cccCCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999998 6  777776431                 2357999999988887754     689


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC----
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG----  185 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~----  185 (214)
                      +|||+|+...       .    +...++.+..+++|+.++..+++++...    +       .++|++||...+.+    
T Consensus        57 ~Vih~Aa~~~-------~----~~~~~~~~~~~~~N~~~~~~l~~aa~~~----g-------~~~v~~Ss~~Vy~~~~~~  114 (299)
T PRK09987         57 VIVNAAAHTA-------V----DKAESEPEFAQLLNATSVEAIAKAANEV----G-------AWVVHYSTDYVFPGTGDI  114 (299)
T ss_pred             EEEECCccCC-------c----chhhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEccceEECCCCCC
Confidence            9999998753       1    1111233455788999999999887532    2       17888998643221    


Q ss_pred             ----CCCCCCcchhhhhHHHHHHHHHHh
Q 028056          186 ----DNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       186 ----~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                          ..+..+...|+.+|.+.+.+.+.+
T Consensus       115 p~~E~~~~~P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987        115 PWQETDATAPLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             CcCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence                112345578999999999998765

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.50  E-value=3.2e-13  Score=109.98  Aligned_cols=130  Identities=20%  Similarity=0.185  Sum_probs=100.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc--cchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL--LDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++|+||||||.||++++++|+++|+.  |..+.|+++..+..  ...+.....+...+..|+.|+++++.+++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~--V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYT--VRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCE--EEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-----
Confidence            6799999999999999999999999997  99999999874432  22333345578899999999999999888     


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                        ..|+|+|.|....          +...+  .-.+.++..+.|+..+++++...-         ++-++|+.||.+++.
T Consensus        78 --gcdgVfH~Asp~~----------~~~~~--~e~~li~pav~Gt~nVL~ac~~~~---------sVkrvV~TSS~aAv~  134 (327)
T KOG1502|consen   78 --GCDGVFHTASPVD----------FDLED--PEKELIDPAVKGTKNVLEACKKTK---------SVKRVVYTSSTAAVR  134 (327)
T ss_pred             --CCCEEEEeCccCC----------CCCCC--cHHhhhhHHHHHHHHHHHHHhccC---------CcceEEEeccHHHhc
Confidence              5799999998543          11111  112567888999999999986442         123999999998877


Q ss_pred             CC
Q 028056          185 GD  186 (214)
Q Consensus       185 ~~  186 (214)
                      .+
T Consensus       135 ~~  136 (327)
T KOG1502|consen  135 YN  136 (327)
T ss_pred             cC
Confidence            53

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.49  E-value=7.4e-13  Score=111.92  Aligned_cols=156  Identities=13%  Similarity=-0.002  Sum_probs=105.7

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      |.-+.+.-++++|+||||+|.||.+++++|.++|++  |+.++|.....  ...    ......++.+|++|.+.+..++
T Consensus        12 ~~~~~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~--V~~v~r~~~~~--~~~----~~~~~~~~~~Dl~d~~~~~~~~   83 (370)
T PLN02695         12 EREPYWPSEKLRICITGAGGFIASHIARRLKAEGHY--IIASDWKKNEH--MSE----DMFCHEFHLVDLRVMENCLKVT   83 (370)
T ss_pred             CCCCCCCCCCCEEEEECCccHHHHHHHHHHHhCCCE--EEEEEeccccc--ccc----ccccceEEECCCCCHHHHHHHH
Confidence            333344457899999999999999999999999987  88888754321  110    0112567889999988776655


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +       .+|+|||+|+...      +.... .   ......+..|+.++..+++++...    +..      ++|++|
T Consensus        84 ~-------~~D~Vih~Aa~~~------~~~~~-~---~~~~~~~~~N~~~t~nll~aa~~~----~vk------~~V~~S  136 (370)
T PLN02695         84 K-------GVDHVFNLAADMG------GMGFI-Q---SNHSVIMYNNTMISFNMLEAARIN----GVK------RFFYAS  136 (370)
T ss_pred             h-------CCCEEEEcccccC------Ccccc-c---cCchhhHHHHHHHHHHHHHHHHHh----CCC------EEEEeC
Confidence            3       5799999998542      01111 1   112334567899999998876432    222      899999


Q ss_pred             cCcccCC------------CC--CCCCcchhhhhHHHHHHHHHHh
Q 028056          179 ARVGSIG------------DN--RLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       179 s~~~~~~------------~~--~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      |...+..            ..  +..+...|+.+|.+.+.+.+.+
T Consensus       137 S~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~  181 (370)
T PLN02695        137 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHY  181 (370)
T ss_pred             chhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            8642210            00  2345679999999999988775

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.46  E-value=5.4e-13  Score=111.65  Aligned_cols=154  Identities=16%  Similarity=0.142  Sum_probs=101.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc---cccchhhcC-------C-CceeEEEecCCCHHH--HHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT---GLLDLKNRF-------P-ERLDVLQLDLTVEST--IEA   96 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~---~~~~~~~~~-------~-~~~~~~~~Dl~~~~~--v~~   96 (214)
                      +++||||||+||.+++++|+++|....|+++.|+.....   ++.+.....       . .++.++.+|++++..  -..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            589999999999999999999984224888899875321   222211111       1 478899999987531  011


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      .+.++   ...+|++||||+...      ..        ..+...+++|+.++..+++.+...    +.      ..+++
T Consensus        81 ~~~~~---~~~~d~vih~a~~~~------~~--------~~~~~~~~~nv~g~~~ll~~a~~~----~~------~~~v~  133 (367)
T TIGR01746        81 EWERL---AENVDTIVHNGALVN------WV--------YPYSELRAANVLGTREVLRLAASG----RA------KPLHY  133 (367)
T ss_pred             HHHHH---HhhCCEEEeCCcEec------cC--------CcHHHHhhhhhHHHHHHHHHHhhC----CC------ceEEE
Confidence            12222   136899999998653      11        123456788999999998877532    22      16999


Q ss_pred             eecCcccCCCC-------------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          177 LSARVGSIGDN-------------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       177 iss~~~~~~~~-------------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +||........             .......|+.+|.+.+.+.+.++
T Consensus       134 iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  180 (367)
T TIGR01746       134 VSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREAS  180 (367)
T ss_pred             EccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHH
Confidence            99986543310             01123579999999999988764

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.45  E-value=3.6e-12  Score=102.06  Aligned_cols=121  Identities=20%  Similarity=0.243  Sum_probs=85.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCH-HHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKE  103 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~  103 (214)
                      ..++++++||||+|+||+.++++|++.|++  |+++.|++++.+..   ... +.++.++.+|+++. +++.   +.+. 
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~---~~~-~~~~~~~~~Dl~d~~~~l~---~~~~-   83 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFA--VKAGVRDVDKAKTS---LPQ-DPSLQIVRADVTEGSDKLV---EAIG-   83 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCE--EEEEecCHHHHHHh---ccc-CCceEEEEeeCCCCHHHHH---HHhh-
Confidence            356789999999999999999999999987  88889987653321   111 34688999999983 3322   2220 


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                        ..+|++|+|+|...      ...+         ...+++|..++..+++++.    +.+.+      +||++||...
T Consensus        84 --~~~d~vi~~~g~~~------~~~~---------~~~~~~n~~~~~~ll~a~~----~~~~~------~iV~iSS~~v  135 (251)
T PLN00141         84 --DDSDAVICATGFRR------SFDP---------FAPWKVDNFGTVNLVEACR----KAGVT------RFILVSSILV  135 (251)
T ss_pred             --cCCCEEEECCCCCc------CCCC---------CCceeeehHHHHHHHHHHH----HcCCC------EEEEEccccc
Confidence              36899999998542      0111         1236789999988888863    33333      9999999854

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.45  E-value=2.3e-12  Score=105.88  Aligned_cols=146  Identities=22%  Similarity=0.223  Sum_probs=104.0

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~  110 (214)
                      ||||||+|.||.+++++|.++|++  |+.++|.........       ..+.++.+|+++.+.+....+..     . |.
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~-----~-d~   67 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHD--VRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKGV-----P-DA   67 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCe--EEEEeCCCccccccc-------cccceeeecccchHHHHHHHhcC-----C-CE
Confidence            999999999999999999999998  999998776544322       45778999999985555444422     1 99


Q ss_pred             EEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC----
Q 028056          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD----  186 (214)
Q Consensus       111 lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~----  186 (214)
                      +||+|+....        ......  .....+.+|+.++..+++++..    .+..      ++|+.||.....+.    
T Consensus        68 vih~aa~~~~--------~~~~~~--~~~~~~~~nv~gt~~ll~aa~~----~~~~------~~v~~ss~~~~~~~~~~~  127 (314)
T COG0451          68 VIHLAAQSSV--------PDSNAS--DPAEFLDVNVDGTLNLLEAARA----AGVK------RFVFASSVSVVYGDPPPL  127 (314)
T ss_pred             EEEccccCch--------hhhhhh--CHHHHHHHHHHHHHHHHHHHHH----cCCC------eEEEeCCCceECCCCCCC
Confidence            9999997641        111111  3456789999999999998865    2222      78886664433321    


Q ss_pred             ------CCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          187 ------NRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       187 ------~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                            .+..+...|+.+|.+.+.+.+.+.+
T Consensus       128 ~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~  158 (314)
T COG0451         128 PIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR  158 (314)
T ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence                  1122223699999999999988753

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.45  E-value=1.1e-12  Score=118.48  Aligned_cols=150  Identities=15%  Similarity=0.132  Sum_probs=103.6

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHH-HHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVEST-IEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~  102 (214)
                      ..++++||||||+|.||.+++++|+++ |++  |+.++|+.......   ..  ..++.++.+|++|... ++++++   
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~--V~~l~r~~~~~~~~---~~--~~~~~~~~gDl~d~~~~l~~~l~---  381 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYE--VYGLDIGSDAISRF---LG--HPRFHFVEGDISIHSEWIEYHIK---  381 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCcE--EEEEeCCchhhhhh---cC--CCceEEEeccccCcHHHHHHHhc---
Confidence            356789999999999999999999986 676  88888876432211   11  2358889999998654 333332   


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                          .+|+|||+|+...      +..     ..+..+..+++|+.++..+++++...    + .      ++|++||...
T Consensus       382 ----~~D~ViHlAa~~~------~~~-----~~~~~~~~~~~Nv~~t~~ll~a~~~~----~-~------~~V~~SS~~v  435 (660)
T PRK08125        382 ----KCDVVLPLVAIAT------PIE-----YTRNPLRVFELDFEENLKIIRYCVKY----N-K------RIIFPSTSEV  435 (660)
T ss_pred             ----CCCEEEECccccC------chh-----hccCHHHHHHhhHHHHHHHHHHHHhc----C-C------eEEEEcchhh
Confidence                6899999999754      111     11223456789999999999987643    2 1      8899999643


Q ss_pred             cCCC--------CC------C-CCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGD--------NR------L-GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~--------~~------~-~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +...        .+      . .+...|+.+|.+.+.+.+.++
T Consensus       436 yg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~  478 (660)
T PRK08125        436 YGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYG  478 (660)
T ss_pred             cCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHH
Confidence            2210        00      0 123479999999999998874

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.43  E-value=1.9e-12  Score=108.38  Aligned_cols=146  Identities=18%  Similarity=0.167  Sum_probs=99.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCC-CHHHHHHHHHHHHHHcC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-VESTIEASAKSIKEKYG  106 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~~  106 (214)
                      ++|+||||+|.||++++++|++. |.+  |+.++|+.....   ....  ..++.++.+|++ +.+.+.++++       
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~--V~~~~r~~~~~~---~~~~--~~~~~~~~~Dl~~~~~~~~~~~~-------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWE--VYGMDMQTDRLG---DLVN--HPRMHFFEGDITINKEWIEYHVK-------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCe--EEEEeCcHHHHH---Hhcc--CCCeEEEeCCCCCCHHHHHHHHc-------
Confidence            47999999999999999999986 565  888887654321   1111  235889999998 5665544443       


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      .+|+|||+|+...      + ..    ..++.+..+++|+.++..+++++..    .+ .      ++|++||...+...
T Consensus        68 ~~d~ViH~aa~~~------~-~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~------~~v~~SS~~vyg~~  125 (347)
T PRK11908         68 KCDVILPLVAIAT------P-AT----YVKQPLRVFELDFEANLPIVRSAVK----YG-K------HLVFPSTSEVYGMC  125 (347)
T ss_pred             CCCEEEECcccCC------h-HH----hhcCcHHHHHHHHHHHHHHHHHHHh----cC-C------eEEEEecceeeccC
Confidence            5899999998643      1 11    1123345678999999998887653    22 1      89999997432210


Q ss_pred             -------C-C-C------CCcchhhhhHHHHHHHHHHhc
Q 028056          187 -------N-R-L------GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 -------~-~-~------~~~~~Y~asKaa~~~~~~~la  210 (214)
                             . + .      .+...|+.+|.+.+.+.+.++
T Consensus       126 ~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~  164 (347)
T PRK11908        126 PDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYG  164 (347)
T ss_pred             CCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHH
Confidence                   0 0 0      123479999999999888763

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.42  E-value=1.1e-12  Score=107.95  Aligned_cols=143  Identities=16%  Similarity=0.111  Sum_probs=95.2

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH--HcCCc
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE--KYGSL  108 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~~~v  108 (214)
                      +|||||+|.||++++++|++.|..  +++..++.......          ..+..+|+.|..+.+.+++++.+  .++++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~--~v~~~~~~~~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCc--eEEEecCCCcchHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            799999999999999999999986  55544443321110          11234677776666666655543  34579


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC--
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~--  186 (214)
                      |+|||+|+...       ..   +.+.   ...++.|+.++..+++++..    .+       ..+|++||...+...  
T Consensus        70 d~Vih~A~~~~-------~~---~~~~---~~~~~~n~~~t~~ll~~~~~----~~-------~~~i~~SS~~vyg~~~~  125 (308)
T PRK11150         70 EAIFHEGACSS-------TT---EWDG---KYMMDNNYQYSKELLHYCLE----RE-------IPFLYASSAATYGGRTD  125 (308)
T ss_pred             cEEEECceecC-------Cc---CCCh---HHHHHHHHHHHHHHHHHHHH----cC-------CcEEEEcchHHhCcCCC
Confidence            99999998643       11   1111   23578999999999888742    22       168999987433211  


Q ss_pred             ------CCCCCcchhhhhHHHHHHHHHHh
Q 028056          187 ------NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       187 ------~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                            .+..+...|+.+|.+.+.+.+.+
T Consensus       126 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~  154 (308)
T PRK11150        126 DFIEEREYEKPLNVYGYSKFLFDEYVRQI  154 (308)
T ss_pred             CCCccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence                  11234578999999999988876

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.41  E-value=2.1e-12  Score=105.11  Aligned_cols=130  Identities=26%  Similarity=0.283  Sum_probs=96.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++||||+|.||.+++++|.++|++  |++.+|+                     .+|+.+.++++++++..     .+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~--v~~~~r~---------------------~~d~~~~~~~~~~~~~~-----~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRV--VVALTSS---------------------QLDLTDPEALERLLRAI-----RPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCE--EEEeCCc---------------------ccCCCCHHHHHHHHHhC-----CCC
Confidence            3799999999999999999999987  8888774                     47999999988887653     689


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC----
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG----  185 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~----  185 (214)
                      ++||+++...       ..    .........+++|+.++..+++++..    .+       .++|++||...+.+    
T Consensus        53 ~vi~~a~~~~-------~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-------~~~v~~Ss~~vy~~~~~~  110 (287)
T TIGR01214        53 AVVNTAAYTD-------VD----GAESDPEKAFAVNALAPQNLARAAAR----HG-------ARLVHISTDYVFDGEGKR  110 (287)
T ss_pred             EEEECCcccc-------cc----ccccCHHHHHHHHHHHHHHHHHHHHH----cC-------CeEEEEeeeeeecCCCCC
Confidence            9999998642       11    11123445678999999999888643    22       17899998643322    


Q ss_pred             ----CCCCCCcchhhhhHHHHHHHHHHh
Q 028056          186 ----DNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       186 ----~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                          ..+..+...|+.+|.+.+.+.+.+
T Consensus       111 ~~~E~~~~~~~~~Y~~~K~~~E~~~~~~  138 (287)
T TIGR01214       111 PYREDDATNPLNVYGQSKLAGEQAIRAA  138 (287)
T ss_pred             CCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence                111234578999999999988765

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.40  E-value=2.2e-12  Score=105.34  Aligned_cols=130  Identities=25%  Similarity=0.242  Sum_probs=94.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      ++||||++|-||.++.+.|.+.|..  ++..+|+                     .+|++|.+.+.+++++.     ++|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~--v~~~~r~---------------------~~dl~d~~~~~~~~~~~-----~pd   53 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYE--VIATSRS---------------------DLDLTDPEAVAKLLEAF-----KPD   53 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEE--EEEESTT---------------------CS-TTSHHHHHHHHHHH-------S
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCE--EEEeCch---------------------hcCCCCHHHHHHHHHHh-----CCC
Confidence            6899999999999999999998876  7777765                     57999999999998877     799


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC---
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD---  186 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~---  186 (214)
                      +|||+|+...           .+...++.+..+.+|+.++..+.+.+...    +       .++|++||.....|.   
T Consensus        54 ~Vin~aa~~~-----------~~~ce~~p~~a~~iN~~~~~~la~~~~~~----~-------~~li~~STd~VFdG~~~~  111 (286)
T PF04321_consen   54 VVINCAAYTN-----------VDACEKNPEEAYAINVDATKNLAEACKER----G-------ARLIHISTDYVFDGDKGG  111 (286)
T ss_dssp             EEEE-----------------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC----T--------EEEEEEEGGGS-SSTSS
T ss_pred             eEeccceeec-----------HHhhhhChhhhHHHhhHHHHHHHHHHHHc----C-------CcEEEeeccEEEcCCccc
Confidence            9999998753           23334556678999999999999987532    2       299999998654432   


Q ss_pred             -----CCCCCcchhhhhHHHHHHHHHHh
Q 028056          187 -----NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       187 -----~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                           ++..+...|+.+|...|...+..
T Consensus       112 ~y~E~d~~~P~~~YG~~K~~~E~~v~~~  139 (286)
T PF04321_consen  112 PYTEDDPPNPLNVYGRSKLEGEQAVRAA  139 (286)
T ss_dssp             SB-TTS----SSHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence                 23455689999999999988763

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.40  E-value=3.6e-12  Score=102.33  Aligned_cols=128  Identities=26%  Similarity=0.288  Sum_probs=103.6

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~  110 (214)
                      +||||++|-+|.++++.|. .+.+  |+.+++..                     +|++|.+.+.+++++.     ++|+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~--v~a~~~~~---------------------~Ditd~~~v~~~i~~~-----~PDv   53 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFE--VIATDRAE---------------------LDITDPDAVLEVIRET-----RPDV   53 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCce--EEeccCcc---------------------ccccChHHHHHHHHhh-----CCCE
Confidence            8999999999999999888 5565  88777644                     7999999999999988     8999


Q ss_pred             EEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC----
Q 028056          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD----  186 (214)
Q Consensus       111 lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~----  186 (214)
                      |||+|++..           .+....+.+..+.+|..++..+.+++...    +       ..+|++|+.+...|.    
T Consensus        54 VIn~AAyt~-----------vD~aE~~~e~A~~vNa~~~~~lA~aa~~~----g-------a~lVhiSTDyVFDG~~~~~  111 (281)
T COG1091          54 VINAAAYTA-----------VDKAESEPELAFAVNATGAENLARAAAEV----G-------ARLVHISTDYVFDGEKGGP  111 (281)
T ss_pred             EEECccccc-----------cccccCCHHHHHHhHHHHHHHHHHHHHHh----C-------CeEEEeecceEecCCCCCC
Confidence            999999764           22333456778999999999999988533    2       289999998754443    


Q ss_pred             ----CCCCCcchhhhhHHHHHHHHHHh
Q 028056          187 ----NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       187 ----~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                          ++..+...||.||.+-|..++..
T Consensus       112 Y~E~D~~~P~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091         112 YKETDTPNPLNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             CCCCCCCCChhhhhHHHHHHHHHHHHh
Confidence                23556789999999999999876

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.37  E-value=5.7e-12  Score=103.70  Aligned_cols=143  Identities=15%  Similarity=0.109  Sum_probs=97.2

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~  110 (214)
                      ||||||+|.||.+++++|.++|.+ .|++++|..... ...+.      ....+..|+.+.+.++.+.+.   .+..+|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~-~~~~~------~~~~~~~d~~~~~~~~~~~~~---~~~~~D~   69 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGIT-DILVVDNLRDGH-KFLNL------ADLVIADYIDKEDFLDRLEKG---AFGKIEA   69 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCc-eEEEEecCCCch-hhhhh------hheeeeccCcchhHHHHHHhh---ccCCCCE
Confidence            689999999999999999999974 377777654321 11111      113456788887776655442   2457999


Q ss_pred             EEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC----
Q 028056          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD----  186 (214)
Q Consensus       111 lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~----  186 (214)
                      |||+|+...       .      ..++....+++|+.++..+++.+...    +       .++|++||...+...    
T Consensus        70 vvh~A~~~~-------~------~~~~~~~~~~~n~~~~~~ll~~~~~~----~-------~~~v~~SS~~vy~~~~~~~  125 (314)
T TIGR02197        70 IFHQGACSD-------T------TETDGEYMMENNYQYSKRLLDWCAEK----G-------IPFIYASSAATYGDGEAGF  125 (314)
T ss_pred             EEECccccC-------c------cccchHHHHHHHHHHHHHHHHHHHHh----C-------CcEEEEccHHhcCCCCCCc
Confidence            999998542       1      11234556789999999999887532    2       178999996533210    


Q ss_pred             ---CC-CCCcchhhhhHHHHHHHHHH
Q 028056          187 ---NR-LGGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       187 ---~~-~~~~~~Y~asKaa~~~~~~~  208 (214)
                         .+ ..+...|+.+|.+.+.+++.
T Consensus       126 ~e~~~~~~p~~~Y~~sK~~~e~~~~~  151 (314)
T TIGR02197       126 REGRELERPLNVYGYSKFLFDQYVRR  151 (314)
T ss_pred             ccccCcCCCCCHHHHHHHHHHHHHHH
Confidence               11 12467899999999999875

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.37  E-value=1.1e-11  Score=102.89  Aligned_cols=155  Identities=22%  Similarity=0.195  Sum_probs=111.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++.+++||||+|.+|++++.+|.+.+....|.+.+..+.....-.+.......++..+++|+.|...+.+.++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            5689999999999999999999999943368888887753222222222235678899999999999887777       


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      .. .+||+|+...           .+.-..+.+..+++|+.|+-.+.+.+...    +..      ++|++||.....++
T Consensus        76 ~~-~Vvh~aa~~~-----------~~~~~~~~~~~~~vNV~gT~nvi~~c~~~----~v~------~lIYtSs~~Vvf~g  133 (361)
T KOG1430|consen   76 GA-VVVHCAASPV-----------PDFVENDRDLAMRVNVNGTLNVIEACKEL----GVK------RLIYTSSAYVVFGG  133 (361)
T ss_pred             Cc-eEEEeccccC-----------ccccccchhhheeecchhHHHHHHHHHHh----CCC------EEEEecCceEEeCC
Confidence            55 7777776542           11222256678999999998888887544    333      99999998655543


Q ss_pred             C-----------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 N-----------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~-----------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .           |......|+.||+--|.+.+...
T Consensus       134 ~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an  168 (361)
T KOG1430|consen  134 EPIINGDESLPYPLKHIDPYGESKALAEKLVLEAN  168 (361)
T ss_pred             eecccCCCCCCCccccccccchHHHHHHHHHHHhc
Confidence            1           22233699999999999888764

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.36  E-value=7.4e-12  Score=108.03  Aligned_cols=146  Identities=16%  Similarity=0.149  Sum_probs=100.0

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      -++++||||||+|.||++++++|+++|.+  |+++++....... .....  ...++.++.+|+.+..     +      
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~--V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l------  181 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDS--VIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L------  181 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCE--EEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h------
Confidence            36789999999999999999999999997  7777764322111 11111  1235778888987652     1      


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                       ..+|+|||+|+...      +.  ..   .++..+.+++|+.++..+++++...    +       .++|++||...+.
T Consensus       182 -~~~D~ViHlAa~~~------~~--~~---~~~p~~~~~~Nv~gt~nLleaa~~~----g-------~r~V~~SS~~VYg  238 (442)
T PLN02206        182 -LEVDQIYHLACPAS------PV--HY---KFNPVKTIKTNVVGTLNMLGLAKRV----G-------ARFLLTSTSEVYG  238 (442)
T ss_pred             -cCCCEEEEeeeecc------hh--hh---hcCHHHHHHHHHHHHHHHHHHHHHh----C-------CEEEEECChHHhC
Confidence             15899999998653      11  11   1223567899999999999987532    2       1789999975432


Q ss_pred             CC-------------CCCCCcchhhhhHHHHHHHHHHh
Q 028056          185 GD-------------NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       185 ~~-------------~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      ..             ++......|+.+|.+.+.+++.+
T Consensus       239 ~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y  276 (442)
T PLN02206        239 DPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDY  276 (442)
T ss_pred             CCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHH
Confidence            11             12233568999999999988765

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.35  E-value=1.3e-11  Score=102.26  Aligned_cols=133  Identities=21%  Similarity=0.159  Sum_probs=95.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++||||||.||++++++|+++|++  |.+++|+.+......      ..++.++.+|++|++++.++++       .+|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~--V~~l~R~~~~~~~l~------~~~v~~v~~Dl~d~~~l~~al~-------g~d   66 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQ--VRCLVRNLRKASFLK------EWGAELVYGDLSLPETLPPSFK-------GVT   66 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCe--EEEEEcChHHhhhHh------hcCCEEEECCCCCHHHHHHHHC-------CCC
Confidence            6999999999999999999999987  999999865422111      2358899999999998876665       579


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCC
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL  189 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~  189 (214)
                      ++||+++...                .+.....++|+.++..+++++.    +.+..      ++|++|+.....     
T Consensus        67 ~Vi~~~~~~~----------------~~~~~~~~~~~~~~~~l~~aa~----~~gvk------r~I~~Ss~~~~~-----  115 (317)
T CHL00194         67 AIIDASTSRP----------------SDLYNAKQIDWDGKLALIEAAK----AAKIK------RFIFFSILNAEQ-----  115 (317)
T ss_pred             EEEECCCCCC----------------CCccchhhhhHHHHHHHHHHHH----HcCCC------EEEEeccccccc-----
Confidence            9999876321                0122346678888888877764    33333      899999854321     


Q ss_pred             CCcchhhhhHHHHHHHHHH
Q 028056          190 GGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       190 ~~~~~Y~asKaa~~~~~~~  208 (214)
                      .+...|..+|...+.+.+.
T Consensus       116 ~~~~~~~~~K~~~e~~l~~  134 (317)
T CHL00194        116 YPYIPLMKLKSDIEQKLKK  134 (317)
T ss_pred             cCCChHHHHHHHHHHHHHH
Confidence            1234688899988877654

>PLN02996 fatty acyl-CoA reductase

Probab=99.33  E-value=2e-11  Score=106.71  Aligned_cols=128  Identities=14%  Similarity=0.222  Sum_probs=87.4

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCC-cEEEEeecCCCCcc---ccc-chh---------hcC--------CCcee
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDK-GCVIATCRNPNGAT---GLL-DLK---------NRF--------PERLD   82 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~-~~vi~~~r~~~~~~---~~~-~~~---------~~~--------~~~~~   82 (214)
                      .++||+|+||||||.||..++++|++.+.+ .+|+++.|......   ++. +..         ...        ..+++
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            378999999999999999999999987643 25788888764321   111 110         001        15789


Q ss_pred             EEEecCCCH-------HHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHH
Q 028056           83 VLQLDLTVE-------STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKH  155 (214)
Q Consensus        83 ~~~~Dl~~~-------~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  155 (214)
                      ++.+|++++       +.++++++       .+|+|||+|+...          +.    +..+..+++|+.|+..++++
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~----------~~----~~~~~~~~~Nv~gt~~ll~~  146 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTN----------FD----ERYDVALGINTLGALNVLNF  146 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccC----------Cc----CCHHHHHHHHHHHHHHHHHH
Confidence            999999843       33444433       5899999998653          11    23456789999999999988


Q ss_pred             HhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          156 MSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       156 ~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +...   .+.      .++|++||...
T Consensus       147 a~~~---~~~------k~~V~vST~~v  164 (491)
T PLN02996        147 AKKC---VKV------KMLLHVSTAYV  164 (491)
T ss_pred             HHhc---CCC------CeEEEEeeeEE
Confidence            7532   111      17888888654

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.33  E-value=8.2e-12  Score=102.42  Aligned_cols=131  Identities=15%  Similarity=-0.026  Sum_probs=90.4

Q ss_pred             EEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 028056           32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLL  111 (214)
Q Consensus        32 lItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~l  111 (214)
                      |||||+|.||.++++.|.+.|.+  |++..+.                    ..+|+++.++++++++..     ++|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~--v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFT--NLVLRTH--------------------KELDLTRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCc--EEEeecc--------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence            69999999999999999999987  5544321                    137999999888877653     68999


Q ss_pred             EECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC----
Q 028056          112 INASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN----  187 (214)
Q Consensus       112 v~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~----  187 (214)
                      ||+|+...        ....  ..+.....++.|+.++..+++.+...    +..      ++|++||.....+..    
T Consensus        54 ih~A~~~~--------~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~------~~i~~SS~~vyg~~~~~~~  113 (306)
T PLN02725         54 ILAAAKVG--------GIHA--NMTYPADFIRENLQIQTNVIDAAYRH----GVK------KLLFLGSSCIYPKFAPQPI  113 (306)
T ss_pred             EEeeeeec--------ccch--hhhCcHHHHHHHhHHHHHHHHHHHHc----CCC------eEEEeCceeecCCCCCCCC
Confidence            99998642        0000  11123345788999999999887533    222      889999864322110    


Q ss_pred             --------CCCC-cchhhhhHHHHHHHHHHh
Q 028056          188 --------RLGG-WHSYRASKAALNQCKILA  209 (214)
Q Consensus       188 --------~~~~-~~~Y~asKaa~~~~~~~l  209 (214)
                              +..+ ...|+.+|.+.+.+.+.+
T Consensus       114 ~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~  144 (306)
T PLN02725        114 PETALLTGPPEPTNEWYAIAKIAGIKMCQAY  144 (306)
T ss_pred             CHHHhccCCCCCCcchHHHHHHHHHHHHHHH
Confidence                    1111 235999999999887765

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.32  E-value=1.5e-11  Score=105.95  Aligned_cols=146  Identities=17%  Similarity=0.153  Sum_probs=99.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +..+|+||||+|.||.+++++|+++|++  |++++|....... .....  ...++.++..|+.+..     +       
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~--V~~ldr~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~-----~-------  182 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDE--VIVIDNFFTGRKENLVHLF--GNPRFELIRHDVVEPI-----L-------  182 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEeCCCCccHhHhhhhc--cCCceEEEECcccccc-----c-------
Confidence            4578999999999999999999999997  8888875432111 11111  1235778888886542     1       


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      ..+|+|||+|+...      +.  ..+   .+..+.+++|+.++..+++++...    +       .++|++||...+..
T Consensus       183 ~~~D~ViHlAa~~~------~~--~~~---~~p~~~~~~Nv~gT~nLleaa~~~----g-------~r~V~~SS~~VYg~  240 (436)
T PLN02166        183 LEVDQIYHLACPAS------PV--HYK---YNPVKTIKTNVMGTLNMLGLAKRV----G-------ARFLLTSTSEVYGD  240 (436)
T ss_pred             cCCCEEEECceecc------ch--hhc---cCHHHHHHHHHHHHHHHHHHHHHh----C-------CEEEEECcHHHhCC
Confidence            25899999998643      11  111   123567889999999999887543    2       17888988753321


Q ss_pred             C-------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 D-------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~-------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .             .+......|+.+|.+.+.+++.+.
T Consensus       241 ~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~  278 (436)
T PLN02166        241 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYH  278 (436)
T ss_pred             CCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHH
Confidence            0             122335679999999999988763

>PLN02778 3,5-epimerase/4-reductase

Probab=99.31  E-value=2.9e-11  Score=99.37  Aligned_cols=132  Identities=17%  Similarity=0.075  Sum_probs=87.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      +++|||||+|.||.+++++|+++|.+  |++..                        .|+.+.+.+...++..     ++
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~--V~~~~------------------------~~~~~~~~v~~~l~~~-----~~   58 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGID--FHYGS------------------------GRLENRASLEADIDAV-----KP   58 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCE--EEEec------------------------CccCCHHHHHHHHHhc-----CC
Confidence            57999999999999999999999987  54321                        2455555555555432     68


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc--ccC--
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV--GSI--  184 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~--~~~--  184 (214)
                      |+|||+|+....        +..+...+...+.+++|+.++..+++++...    +.       +.+.+||.+  +..  
T Consensus        59 D~ViH~Aa~~~~--------~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv-------~~v~~sS~~vy~~~~~  119 (298)
T PLN02778         59 THVFNAAGVTGR--------PNVDWCESHKVETIRANVVGTLTLADVCRER----GL-------VLTNYATGCIFEYDDA  119 (298)
T ss_pred             CEEEECCcccCC--------CCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----CC-------CEEEEecceEeCCCCC
Confidence            999999997641        1111223345668899999999999988543    21       233444432  211  


Q ss_pred             ----------CCC-CCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 ----------GDN-RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ----------~~~-~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                                ... +.+....|+.+|.+.+.+++.++
T Consensus       120 ~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        120 HPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence                      011 12234689999999999988764

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.25  E-value=6.2e-11  Score=94.89  Aligned_cols=150  Identities=16%  Similarity=0.169  Sum_probs=88.6

Q ss_pred             EecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC---cccccchhhc----------CCCceeEEEecCCCHH--HHHHH
Q 028056           33 VQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKNR----------FPERLDVLQLDLTVES--TIEAS   97 (214)
Q Consensus        33 ItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~---~~~~~~~~~~----------~~~~~~~~~~Dl~~~~--~v~~~   97 (214)
                      ||||||.+|.++.++|++.+....|+++.|....   .+++.+.+.+          ...+++++.+|++++.  --+..
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            7999999999999999999873259999997743   2223222211          2568999999999854  01111


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      ++++.   ..+|++||||+...      ..        ..+.+..++|+.|+..+++.+..    .+.      ..++++
T Consensus        81 ~~~L~---~~v~~IiH~Aa~v~------~~--------~~~~~~~~~NV~gt~~ll~la~~----~~~------~~~~~i  133 (249)
T PF07993_consen   81 YQELA---EEVDVIIHCAASVN------FN--------APYSELRAVNVDGTRNLLRLAAQ----GKR------KRFHYI  133 (249)
T ss_dssp             HHHHH---HH--EEEE--SS-S------BS---------S--EEHHHHHHHHHHHHHHHTS----SS---------EEEE
T ss_pred             hhccc---cccceeeecchhhh------hc--------ccchhhhhhHHHHHHHHHHHHHh----ccC------cceEEe
Confidence            23232   25799999998653      11        13344678899999999998762    211      188999


Q ss_pred             ecCcccCCCC------------------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          178 SARVGSIGDN------------------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       178 ss~~~~~~~~------------------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ||. ...+..                  .......|..||..-|.+.+..+
T Consensus       134 STa-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~  183 (249)
T PF07993_consen  134 STA-YVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAA  183 (249)
T ss_dssp             EEG-GGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHH
T ss_pred             ccc-cccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHH
Confidence            993 222110                  12345799999999999998774

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.24  E-value=6.9e-11  Score=106.84  Aligned_cols=148  Identities=18%  Similarity=0.131  Sum_probs=97.9

Q ss_pred             EEEEecCCCchhHHHHHHHH--hcCCCcEEEEeecCCCCcccccchhhcCC-CceeEEEecCCCHHHH--HHHHHHHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLL--EKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTI--EASAKSIKEK  104 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~--~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v--~~~~~~~~~~  104 (214)
                      ++|||||||.||.+++++|+  ..|.+  |++++|+... ..........+ .++.++.+|++|++..  ...++++   
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~--V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l---   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREAT--VHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL---   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCE--EEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh---
Confidence            69999999999999999999  47776  9989986532 22222222212 4688999999985310  1112222   


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                       ..+|++||+|+...       ..    .   ......++|+.++..+++++..    .+..      ++|++||.....
T Consensus        76 -~~~D~Vih~Aa~~~-------~~----~---~~~~~~~~nv~gt~~ll~~a~~----~~~~------~~v~~SS~~v~g  130 (657)
T PRK07201         76 -GDIDHVVHLAAIYD-------LT----A---DEEAQRAANVDGTRNVVELAER----LQAA------TFHHVSSIAVAG  130 (657)
T ss_pred             -cCCCEEEECceeec-------CC----C---CHHHHHHHHhHHHHHHHHHHHh----cCCC------eEEEEecccccc
Confidence             47899999999643       11    1   1234567899999888887643    2222      899999875432


Q ss_pred             CCC----------CCCCcchhhhhHHHHHHHHHH
Q 028056          185 GDN----------RLGGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       185 ~~~----------~~~~~~~Y~asKaa~~~~~~~  208 (214)
                      ...          +......|+.+|...+.+.+.
T Consensus       131 ~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~  164 (657)
T PRK07201        131 DYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE  164 (657)
T ss_pred             CccCccccccchhhcCCCCchHHHHHHHHHHHHH
Confidence            110          112235799999999998874

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.24  E-value=3.8e-10  Score=85.83  Aligned_cols=126  Identities=25%  Similarity=0.260  Sum_probs=92.5

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~  110 (214)
                      |+|+||||.+|..++++|+++|++  |.++.|++++.+.        ..+++++++|+.|++++.+.+.       ..|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~--V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHE--VTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSE--EEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCE--EEEEecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcch
Confidence            689999999999999999999986  9999999876443        5679999999999988877666       6899


Q ss_pred             EEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC--
Q 028056          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR--  188 (214)
Q Consensus       111 lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~--  188 (214)
                      +|+++|...       .    +                 ...++.++..+++.+..      +++.+|+.........  
T Consensus        64 vi~~~~~~~-------~----~-----------------~~~~~~~~~a~~~~~~~------~~v~~s~~~~~~~~~~~~  109 (183)
T PF13460_consen   64 VIHAAGPPP-------K----D-----------------VDAAKNIIEAAKKAGVK------RVVYLSSAGVYRDPPGLF  109 (183)
T ss_dssp             EEECCHSTT-------T----H-----------------HHHHHHHHHHHHHTTSS------EEEEEEETTGTTTCTSEE
T ss_pred             hhhhhhhhc-------c----c-----------------ccccccccccccccccc------cceeeeccccCCCCCccc
Confidence            999997542       1    0                 34455566666666544      8999998765553211  


Q ss_pred             ----CCCcchhhhhHHHHHHHHH
Q 028056          189 ----LGGWHSYRASKAALNQCKI  207 (214)
Q Consensus       189 ----~~~~~~Y~asKaa~~~~~~  207 (214)
                          .+....|...|...+.+.+
T Consensus       110 ~~~~~~~~~~~~~~~~~~e~~~~  132 (183)
T PF13460_consen  110 SDEDKPIFPEYARDKREAEEALR  132 (183)
T ss_dssp             EGGTCGGGHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhhHHHHHHHHHHHH
Confidence                1122366777766666554

...

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.20  E-value=5.8e-11  Score=93.69  Aligned_cols=102  Identities=13%  Similarity=0.139  Sum_probs=77.0

Q ss_pred             cEEEEecC-CCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGA-SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~-s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      .+=.||.. |||||.++|++|+++|++  |+++++.. ...   .    ..    ...||+++.++++++++++.+.+++
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~--Vvlv~~~~-~l~---~----~~----~~~~Dv~d~~s~~~l~~~v~~~~g~   80 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHE--VTLVTTKR-ALK---P----EP----HPNLSIREIETTKDLLITLKELVQE   80 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCE--EEEEcChh-hcc---c----cc----CCcceeecHHHHHHHHHHHHHHcCC
Confidence            45567775 679999999999999998  77776532 111   0    00    2458999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHH
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIK  154 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  154 (214)
                      +|++|||||+..       ..+..+.+.++|++++   ..+.|++.+
T Consensus        81 iDiLVnnAgv~d-------~~~~~~~s~e~~~~~~---~~~~~~~~~  117 (227)
T TIGR02114        81 HDILIHSMAVSD-------YTPVYMTDLEQVQASD---NLNEFLSKQ  117 (227)
T ss_pred             CCEEEECCEecc-------ccchhhCCHHHHhhhc---chhhhhccc
Confidence            999999999764       4567778888888664   446666655

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.17  E-value=3.5e-10  Score=102.62  Aligned_cols=134  Identities=16%  Similarity=0.049  Sum_probs=92.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      ..++|||||+|.||+++++.|.++|.+  |..                        ...|++|.+.+...+++.     +
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~--v~~------------------------~~~~l~d~~~v~~~i~~~-----~  428 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIA--YEY------------------------GKGRLEDRSSLLADIRNV-----K  428 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCe--EEe------------------------eccccccHHHHHHHHHhh-----C
Confidence            357999999999999999999998876  421                        124688888887777654     7


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC---
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI---  184 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~---  184 (214)
                      +|+|||+|+....        +..+...++..+.+++|+.++..+++++...    +.       .++++||.....   
T Consensus       429 pd~Vih~Aa~~~~--------~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g~-------~~v~~Ss~~v~~~~~  489 (668)
T PLN02260        429 PTHVFNAAGVTGR--------PNVDWCESHKVETIRANVVGTLTLADVCREN----GL-------LMMNFATGCIFEYDA  489 (668)
T ss_pred             CCEEEECCcccCC--------CCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----CC-------eEEEEcccceecCCc
Confidence            8999999997641        1112333455678899999999999988643    21       445555533211   


Q ss_pred             --------C---C-CCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          185 --------G---D-NRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       185 --------~---~-~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                              +   . .+.+....|+.+|.+.+.+++.+.+
T Consensus       490 ~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~  528 (668)
T PLN02260        490 KHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDN  528 (668)
T ss_pred             ccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh
Confidence                    1   0 1122347899999999999887643

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.15  E-value=2.2e-10  Score=90.90  Aligned_cols=160  Identities=13%  Similarity=0.055  Sum_probs=115.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC--CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .|.++||||.|.||...++.++....+...+..+.=.-  .+..+++.  ....+..+++.|+.+...+..++.+     
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~--~n~p~ykfv~~di~~~~~~~~~~~~-----   78 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPV--RNSPNYKFVEGDIADADLVLYLFET-----   78 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhh--ccCCCceEeeccccchHHHHhhhcc-----
Confidence            38999999999999999999999877644555443111  12222221  1245789999999999988877763     


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|.|+|-|....           .+.+.-+..+....|+.++..|++........         ..+|.+|+...+..
T Consensus        79 ~~id~vihfaa~t~-----------vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i---------~~fvhvSTdeVYGd  138 (331)
T KOG0747|consen   79 EEIDTVIHFAAQTH-----------VDRSFGDSFEFTKNNILSTHVLLEAVRVSGNI---------RRFVHVSTDEVYGD  138 (331)
T ss_pred             CchhhhhhhHhhhh-----------hhhhcCchHHHhcCCchhhhhHHHHHHhccCe---------eEEEEecccceecC
Confidence            38999999998653           34444555667899999999999988655422         28899998643221


Q ss_pred             ---------CCCCCCcchhhhhHHHHHHHHHHh-ccccC
Q 028056          186 ---------DNRLGGWHSYRASKAALNQCKILA-MDFEV  214 (214)
Q Consensus       186 ---------~~~~~~~~~Y~asKaa~~~~~~~l-a~~~~  214 (214)
                               ...+.+...|+++|+|.+++.+++ .+|++
T Consensus       139 s~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~l  177 (331)
T KOG0747|consen  139 SDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSYGL  177 (331)
T ss_pred             ccccccccccccCCCCCchHHHHHHHHHHHHHHhhccCC
Confidence                     123456689999999999999998 77653

>PRK05865 hypothetical protein; Provisional

Probab=99.15  E-value=5.5e-10  Score=102.37  Aligned_cols=103  Identities=21%  Similarity=0.332  Sum_probs=79.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++||||+|+||.+++++|+++|++  |++++|+....         ...++.++.+|++|.+++.++++       .+|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~--Vv~l~R~~~~~---------~~~~v~~v~gDL~D~~~l~~al~-------~vD   63 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHE--VVGIARHRPDS---------WPSSADFIAADIRDATAVESAMT-------GAD   63 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCE--EEEEECCchhh---------cccCceEEEeeCCCHHHHHHHHh-------CCC
Confidence            6999999999999999999999997  88888875321         11257789999999999887776       589


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      ++||+|+...         +           .+++|+.++..+++++    ++.+.+      ++|++||.
T Consensus        64 ~VVHlAa~~~---------~-----------~~~vNv~GT~nLLeAa----~~~gvk------r~V~iSS~  104 (854)
T PRK05865         64 VVAHCAWVRG---------R-----------NDHINIDGTANVLKAM----AETGTG------RIVFTSSG  104 (854)
T ss_pred             EEEECCCccc---------c-----------hHHHHHHHHHHHHHHH----HHcCCC------eEEEECCc
Confidence            9999997432         0           2567888888777665    344433      89999984

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.13  E-value=2e-10  Score=87.25  Aligned_cols=86  Identities=23%  Similarity=0.237  Sum_probs=70.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++||||| |+|..++++|+++|++  |++.+|+++..+.+...+.. ..++.++.+|++|++++.++++++.+.++++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~--V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFH--VSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCE--EEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            68999998 6777899999999997  88889987654443332322 45788899999999999999999999889999


Q ss_pred             EEEECccccC
Q 028056          110 LLINASGILS  119 (214)
Q Consensus       110 ~lv~nag~~~  119 (214)
                      ++|+..-...
T Consensus        78 ~lv~~vh~~~   87 (177)
T PRK08309         78 LAVAWIHSSA   87 (177)
T ss_pred             EEEEeccccc
Confidence            9998886543

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.12  E-value=3.9e-09  Score=77.40  Aligned_cols=155  Identities=15%  Similarity=0.131  Sum_probs=102.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc--
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY--  105 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--  105 (214)
                      .++|+|.||-|.+|.+++..|-.+++.  |.-.+-.++...          ..-+.+..|-+=.++-+.+.+++-+.+  
T Consensus         3 agrVivYGGkGALGSacv~~Fkannyw--V~siDl~eNe~A----------d~sI~V~~~~swtEQe~~v~~~vg~sL~g   70 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYW--VLSIDLSENEQA----------DSSILVDGNKSWTEQEQSVLEQVGSSLQG   70 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeE--EEEEeecccccc----------cceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence            468999999999999999999999986  655554433211          112233334333445556666666543  


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      .++|.+++.||.+...+.     +- +.-..+.+-++...++....-.+.+..+++..+        .+-....-++..+
T Consensus        71 ekvDav~CVAGGWAGGnA-----ks-Kdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GG--------LL~LtGAkaAl~g  136 (236)
T KOG4022|consen   71 EKVDAVFCVAGGWAGGNA-----KS-KDLVKNADLMWKQSVWTSAISAKLATTHLKPGG--------LLQLTGAKAALGG  136 (236)
T ss_pred             cccceEEEeeccccCCCc-----ch-hhhhhchhhHHHHHHHHHHHHHHHHHhccCCCc--------eeeecccccccCC
Confidence            479999999998752211     11 112244555677777777777777777776542        4443333344444


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                         .|++..|+++|+|+++++++|+.
T Consensus       137 ---TPgMIGYGMAKaAVHqLt~SLaa  159 (236)
T KOG4022|consen  137 ---TPGMIGYGMAKAAVHQLTSSLAA  159 (236)
T ss_pred             ---CCcccchhHHHHHHHHHHHHhcc
Confidence               79999999999999999999954

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.07  E-value=6.7e-10  Score=98.65  Aligned_cols=126  Identities=15%  Similarity=0.228  Sum_probs=86.5

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCC-cEEEEeecCCCCc---cccc-chh---------hcC--------CCceeE
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDK-GCVIATCRNPNGA---TGLL-DLK---------NRF--------PERLDV   83 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~-~~vi~~~r~~~~~---~~~~-~~~---------~~~--------~~~~~~   83 (214)
                      +++|+|+||||||.||..++++|++.+.+ ..|.++.|.....   +++. ++.         +..        ..+++.
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            47999999999999999999999987754 2588888865432   1121 111         011        247899


Q ss_pred             EEecCCCHH------HHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHh
Q 028056           84 LQLDLTVES------TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMS  157 (214)
Q Consensus        84 ~~~Dl~~~~------~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  157 (214)
                      +.+|++++.      ..+.+.+       .+|+|||+|+...          +    .+.++..+++|+.|+..+++.+.
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~----------f----~~~~~~a~~vNV~GT~nLLelA~  255 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTT----------F----DERYDVAIDINTRGPCHLMSFAK  255 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECccccc----------c----ccCHHHHHHHHHHHHHHHHHHHH
Confidence            999999873      3332222       5899999998653          1    13456678889999999999875


Q ss_pred             hHHhcCCCCCCCCceEEEEeecCc
Q 028056          158 PLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       158 ~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .. .  ..      ..+|++||..
T Consensus       256 ~~-~--~l------k~fV~vSTay  270 (605)
T PLN02503        256 KC-K--KL------KLFLQVSTAY  270 (605)
T ss_pred             Hc-C--CC------CeEEEccCce
Confidence            32 1  11      1788888864

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.07  E-value=2.2e-09  Score=85.33  Aligned_cols=157  Identities=18%  Similarity=0.141  Sum_probs=113.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--cc--ccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~--~~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+|++||||-||--|.-+|+.|++.|+.  |.-+.|.....  .+  +.+.......++.++.+|++|..++.++++++ 
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~--VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYE--VHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcE--EEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc-
Confidence            3689999999999999999999999997  77776653322  21  11222222346889999999999999999988 


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC--
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR--  180 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~--  180 (214)
                          ++|-+.|-++...           ...+.++.+...+++..|+..++.++.-.-.  ..      -++..-||.  
T Consensus        78 ----~PdEIYNLaAQS~-----------V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~--~~------~rfYQAStSE~  134 (345)
T COG1089          78 ----QPDEIYNLAAQSH-----------VGVSFEQPEYTADVDAIGTLRLLEAIRILGE--KK------TRFYQASTSEL  134 (345)
T ss_pred             ----Cchhheecccccc-----------ccccccCcceeeeechhHHHHHHHHHHHhCC--cc------cEEEecccHHh
Confidence                8899999887543           4566677788899999999999998753321  11      155544443  


Q ss_pred             cccCC------CCCCCCcchhhhhHHHHHHHHHHh
Q 028056          181 VGSIG------DNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       181 ~~~~~------~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      .|...      ..|..+.++|+++|..-.-+|...
T Consensus       135 fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNY  169 (345)
T COG1089         135 YGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNY  169 (345)
T ss_pred             hcCcccCccccCCCCCCCCHHHHHHHHHHheeeeh
Confidence            33221      246777899999998766665544

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.05  E-value=2.5e-09  Score=86.75  Aligned_cols=167  Identities=17%  Similarity=0.147  Sum_probs=122.4

Q ss_pred             CcEEEEecC-CCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           28 GGVSLVQGA-SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        28 ~k~vlItG~-s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ..+|+|.|. +.-|++.+|..|-++|+-  |++++.+.+..+.++++.   ...+.....|..++.++...++++.+.+.
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFI--V~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFI--VYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeE--EEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            458899996 789999999999999995  777777665433333332   34577788888877777777776665433


Q ss_pred             --------------CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCce
Q 028056          107 --------------SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA  172 (214)
Q Consensus       107 --------------~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~  172 (214)
                                    .+..+|......      .+.++++..+++.|.+.++.|+.-.+..+|.++|+++.+...    +.
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~------yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~----~~  147 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLS------YPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQ----KS  147 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCC------CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC----Cc
Confidence                          244455444332      368999999999999999999999999999999999883200    02


Q ss_pred             EEEEee-cCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          173 VVANLS-ARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       173 ~iv~is-s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .||.+. |+.....   .|.++.-....+++.+|+++| +|.
T Consensus       148 ~iil~~Psi~ssl~---~PfhspE~~~~~al~~~~~~LrrEl  186 (299)
T PF08643_consen  148 KIILFNPSISSSLN---PPFHSPESIVSSALSSFFTSLRREL  186 (299)
T ss_pred             eEEEEeCchhhccC---CCccCHHHHHHHHHHHHHHHHHHHh
Confidence            555554 4444444   688899999999999999999 543

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.99  E-value=6.5e-09  Score=85.97  Aligned_cols=151  Identities=20%  Similarity=0.161  Sum_probs=103.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC---cccccchhh-------cCCCceeEEEecCCC------HH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKN-------RFPERLDVLQLDLTV------ES   92 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~---~~~~~~~~~-------~~~~~~~~~~~Dl~~------~~   92 (214)
                      +++++|||||.+|+.+.++|..+-.. .|+...|-...   .+++.+.+.       ....+++.+.+|++.      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~-kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDA-KVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCC-cEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence            57999999999999999999886552 48888886552   233433333       335689999999994      33


Q ss_pred             HHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCce
Q 028056           93 TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA  172 (214)
Q Consensus        93 ~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~  172 (214)
                      .++++.+       .+|.+|||++...      ..        ..+.+....|+.|+..+++.+.-.  +   .     -
T Consensus        80 ~~~~La~-------~vD~I~H~gA~Vn------~v--------~pYs~L~~~NVlGT~evlrLa~~g--k---~-----K  128 (382)
T COG3320          80 TWQELAE-------NVDLIIHNAALVN------HV--------FPYSELRGANVLGTAEVLRLAATG--K---P-----K  128 (382)
T ss_pred             HHHHHhh-------hcceEEecchhhc------cc--------CcHHHhcCcchHhHHHHHHHHhcC--C---C-----c
Confidence            4444443       5799999998653      11        223455788999999999987422  1   1     1


Q ss_pred             EEEEeecCcccCCCC-----------------CCCCcchhhhhHHHHHHHHHHhcc
Q 028056          173 VVANLSARVGSIGDN-----------------RLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       173 ~iv~iss~~~~~~~~-----------------~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      .+.++||+.......                 .......|+-||-+.|.+++...+
T Consensus       129 p~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~  184 (382)
T COG3320         129 PLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD  184 (382)
T ss_pred             eeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh
Confidence            678888875433210                 123347899999999999998754

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.96  E-value=1.7e-09  Score=99.16  Aligned_cols=162  Identities=14%  Similarity=0.154  Sum_probs=130.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc---cccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT---GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ..|+++|+||-||+|.++|.+|..+|++ .+++.+|+--+..   ......++.+-++..-.-|++..+....++++.. 
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar-~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~- 1844 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGAR-KLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN- 1844 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCce-EEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-
Confidence            3689999999999999999999999998 7999999765422   1344445556677766778888888888887664 


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +.+++..++|-|.+..       ++.+++.++++|...-+-.+.|+.++-+.....--.-.        .+|.+||+..-
T Consensus      1845 kl~~vGGiFnLA~VLR-------D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~Ld--------yFv~FSSvscG 1909 (2376)
T KOG1202|consen 1845 KLGPVGGIFNLAAVLR-------DGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELD--------YFVVFSSVSCG 1909 (2376)
T ss_pred             hcccccchhhHHHHHH-------hhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccc--------eEEEEEeeccc
Confidence            4578999999999986       88899999999999999999999988776544322211        88999999887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHH
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~  208 (214)
                      ++   ..+++.|+-+.++|+.++.-
T Consensus      1910 RG---N~GQtNYG~aNS~MERiceq 1931 (2376)
T KOG1202|consen 1910 RG---NAGQTNYGLANSAMERICEQ 1931 (2376)
T ss_pred             CC---CCcccccchhhHHHHHHHHH
Confidence            88   48889999999999988764

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.93  E-value=1.7e-08  Score=82.05  Aligned_cols=99  Identities=12%  Similarity=0.112  Sum_probs=66.3

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~  110 (214)
                      ||||||+|.||.+++++|++.|++  |+.++|+.........        ..  ..|+.. .       ...+.+..+|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~--------~~--~~~~~~-~-------~~~~~~~~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHE--VTILTRSPPAGANTKW--------EG--YKPWAP-L-------AESEALEGADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCE--EEEEeCCCCCCCcccc--------ee--eecccc-c-------chhhhcCCCCE
Confidence            689999999999999999999987  9999998865432110        00  112221 1       11223357999


Q ss_pred             EEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhh
Q 028056          111 LINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSP  158 (214)
Q Consensus       111 lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  158 (214)
                      |||+|+...      ..   .+...+.....+++|+.++..+++++..
T Consensus        61 Vvh~a~~~~------~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~   99 (292)
T TIGR01777        61 VINLAGEPI------AD---KRWTEERKQEIRDSRIDTTRALVEAIAA   99 (292)
T ss_pred             EEECCCCCc------cc---ccCCHHHHHHHHhcccHHHHHHHHHHHh
Confidence            999998642      11   1233344556788999999888887753

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.90  E-value=4.2e-08  Score=78.18  Aligned_cols=153  Identities=14%  Similarity=0.082  Sum_probs=102.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++.+++||||+|.||+++|++|..+|..  ||+.+--........+.+.. ..+...+.-|+..+     ++.    
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~--VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~~----   90 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHE--VIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LLK----   90 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCe--EEEEecccccchhhcchhcc-CcceeEEEeechhH-----HHH----
Confidence            3456799999999999999999999999976  66665433322222222211 34566676677544     344    


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                         .+|.++|-|....++.+.           ....+.+.+|+.++..++..+..-.+           +++..|+...+
T Consensus        91 ---evD~IyhLAapasp~~y~-----------~npvktIktN~igtln~lglakrv~a-----------R~l~aSTseVY  145 (350)
T KOG1429|consen   91 ---EVDQIYHLAAPASPPHYK-----------YNPVKTIKTNVIGTLNMLGLAKRVGA-----------RFLLASTSEVY  145 (350)
T ss_pred             ---HhhhhhhhccCCCCcccc-----------cCccceeeecchhhHHHHHHHHHhCc-----------eEEEeeccccc
Confidence               458888999877633222           22345689999999998887754321           77777775433


Q ss_pred             CCC-------------CCCCCcchhhhhHHHHHHHHHHh-cccc
Q 028056          184 IGD-------------NRLGGWHSYRASKAALNQCKILA-MDFE  213 (214)
Q Consensus       184 ~~~-------------~~~~~~~~Y~asKaa~~~~~~~l-a~~~  213 (214)
                      ...             .|......|.-.|...+.++... +++.
T Consensus       146 gdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~g  189 (350)
T KOG1429|consen  146 GDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQEG  189 (350)
T ss_pred             CCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhhcccC
Confidence            211             24566789999999999999887 5543

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.90  E-value=1.2e-08  Score=86.76  Aligned_cols=80  Identities=15%  Similarity=0.230  Sum_probs=61.9

Q ss_pred             ccccCcEEEEecC----------------CCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEec
Q 028056           24 VKWKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD   87 (214)
Q Consensus        24 ~~l~~k~vlItG~----------------s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   87 (214)
                      .+++||+++||||                ||++|.++|++|+++|++  |++++++.. .+.        ..  ....+|
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~--V~~v~~~~~-~~~--------~~--~~~~~d  250 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGAD--VTLVSGPVN-LPT--------PA--GVKRID  250 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCE--EEEeCCCcc-ccC--------CC--CcEEEc
Confidence            3579999999999                555999999999999998  888887652 110        11  134679


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECccccC
Q 028056           88 LTVESTIEASAKSIKEKYGSLNLLINASGILS  119 (214)
Q Consensus        88 l~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~  119 (214)
                      +++.+++.+.++   +.++++|++|||||+..
T Consensus       251 v~~~~~~~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        251 VESAQEMLDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             cCCHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence            999888766654   55788999999999864

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.86  E-value=2.4e-08  Score=97.36  Aligned_cols=157  Identities=17%  Similarity=0.167  Sum_probs=99.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcC--CCcEEEEeecCCCCcccc---cchhhc-------CCCceeEEEecCCCHHH--
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGL---LDLKNR-------FPERLDVLQLDLTVEST--   93 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g--~~~~vi~~~r~~~~~~~~---~~~~~~-------~~~~~~~~~~Dl~~~~~--   93 (214)
                      .++|+|||++|.+|.+++++|++.+  ....|+...|+....+..   .+....       ...++.++.+|++++.-  
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5899999999999999999999987  333588888876443221   111111       12378899999986521  


Q ss_pred             HHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceE
Q 028056           94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV  173 (214)
Q Consensus        94 v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~  173 (214)
                      -...++++.   ..+|++||||+...      ..     .   .+......|+.|+..+++.+..    .+..      +
T Consensus      1051 ~~~~~~~l~---~~~d~iiH~Aa~~~------~~-----~---~~~~~~~~nv~gt~~ll~~a~~----~~~~------~ 1103 (1389)
T TIGR03443      1051 SDEKWSDLT---NEVDVIIHNGALVH------WV-----Y---PYSKLRDANVIGTINVLNLCAE----GKAK------Q 1103 (1389)
T ss_pred             CHHHHHHHH---hcCCEEEECCcEec------Cc-----c---CHHHHHHhHHHHHHHHHHHHHh----CCCc------e
Confidence            011122222   36899999998643      01     1   1222345699999999887743    2222      7


Q ss_pred             EEEeecCcccCC-------------------CC------CCCCcchhhhhHHHHHHHHHHhcc
Q 028056          174 VANLSARVGSIG-------------------DN------RLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       174 iv~iss~~~~~~-------------------~~------~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      ++++||...+..                   ..      .......|+.||.+.+.+.+.+++
T Consensus      1104 ~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~ 1166 (1389)
T TIGR03443      1104 FSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK 1166 (1389)
T ss_pred             EEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh
Confidence            899999644311                   00      011235699999999999887643

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.82  E-value=1.1e-08  Score=83.70  Aligned_cols=85  Identities=20%  Similarity=0.088  Sum_probs=64.0

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC---CCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP---NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ++++|+++|+|+ ||+|++++..|++.|++ .|.+++|+.   ++++++.+.+.+....+....+|+++.+++.+.++  
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~-~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAK-EITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc--
Confidence            467899999999 69999999999999997 699999987   44444444443333455667789988777665444  


Q ss_pred             HHHcCCccEEEECcccc
Q 028056          102 KEKYGSLNLLINASGIL  118 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~  118 (214)
                           ..|+||||....
T Consensus       199 -----~~DilINaTp~G  210 (289)
T PRK12548        199 -----SSDILVNATLVG  210 (289)
T ss_pred             -----cCCEEEEeCCCC
Confidence                 459999998654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.81  E-value=5.7e-08  Score=79.08  Aligned_cols=76  Identities=12%  Similarity=0.119  Sum_probs=60.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC-c
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS-L  108 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~-v  108 (214)
                      +++||||||.+|+.++++|++.|.+  |.+++|++++..         ..++..+.+|+.|++++..+++.. +.... +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~--V~~~~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVP--FLVASRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCc--EEEEeCCCcccc---------CCCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence            4899999999999999999999998  999999987532         124566789999999999888653 22334 8


Q ss_pred             cEEEECccc
Q 028056          109 NLLINASGI  117 (214)
Q Consensus       109 d~lv~nag~  117 (214)
                      |.++++++.
T Consensus        69 d~v~~~~~~   77 (285)
T TIGR03649        69 SAVYLVAPP   77 (285)
T ss_pred             eEEEEeCCC
Confidence            999988763

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK12320 hypothetical protein; Provisional

Probab=98.78  E-value=5.2e-08  Score=87.83  Aligned_cols=103  Identities=20%  Similarity=0.264  Sum_probs=74.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      ++|||||+|.||++++++|+++|.+  |++++|+....         ...++.++.+|+++.. +.+++       ..+|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~--Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al-------~~~D   62 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHT--VSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA-------GEAD   62 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCE--EEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh-------cCCC
Confidence            5999999999999999999999987  88888764321         1235788999999873 33332       2689


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      ++||+|+...       ..      +      ..+|+.++.++++++.    +.+       .++|++||..
T Consensus        63 ~VIHLAa~~~-------~~------~------~~vNv~Gt~nLleAA~----~~G-------vRiV~~SS~~  104 (699)
T PRK12320         63 AVIHLAPVDT-------SA------P------GGVGITGLAHVANAAA----RAG-------ARLLFVSQAA  104 (699)
T ss_pred             EEEEcCccCc-------cc------h------hhHHHHHHHHHHHHHH----HcC-------CeEEEEECCC
Confidence            9999997531       11      1      1368888888888764    322       1788899864

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.71  E-value=1.3e-07  Score=80.19  Aligned_cols=79  Identities=18%  Similarity=0.326  Sum_probs=60.3

Q ss_pred             cccCcEEEEecC---------------CCc-hhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecC
Q 028056           25 KWKGGVSLVQGA---------------SRG-IGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL   88 (214)
Q Consensus        25 ~l~~k~vlItG~---------------s~g-iG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl   88 (214)
                      +++||+++||||               |+| +|.++|++|..+|++  |++++++....         .+.  ....+|+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~--V~~~~g~~~~~---------~~~--~~~~~~v  248 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGAD--VTLITGPVSLL---------TPP--GVKSIKV  248 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCE--EEEeCCCCccC---------CCC--CcEEEEe
Confidence            488999999999               566 999999999999998  88777655321         111  2256799


Q ss_pred             CCHHHH-HHHHHHHHHHcCCccEEEECccccC
Q 028056           89 TVESTI-EASAKSIKEKYGSLNLLINASGILS  119 (214)
Q Consensus        89 ~~~~~v-~~~~~~~~~~~~~vd~lv~nag~~~  119 (214)
                      ++.+++ ++++++.   ++.+|++|+|||+..
T Consensus       249 ~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd  277 (390)
T TIGR00521       249 STAEEMLEAALNEL---AKDFDIFISAAAVAD  277 (390)
T ss_pred             ccHHHHHHHHHHhh---cccCCEEEEcccccc
Confidence            998888 5555443   468999999999975

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PLN00016 RNA-binding protein; Provisional

Probab=98.65  E-value=3.3e-07  Score=77.80  Aligned_cols=80  Identities=14%  Similarity=0.178  Sum_probs=56.0

Q ss_pred             cCcEEEEe----cCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccch----hhc-CCCceeEEEecCCCHHHHHHH
Q 028056           27 KGGVSLVQ----GASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL----KNR-FPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        27 ~~k~vlIt----G~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      ..++||||    ||+|.||.+++++|+++|++  |++++|+..........    ..+ ....+.++.+|+.|   +..+
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~--V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHE--VTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCE--EEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhh
Confidence            45789999    99999999999999999987  99999987643222110    001 11247888999876   3322


Q ss_pred             HHHHHHHcCCccEEEECcc
Q 028056           98 AKSIKEKYGSLNLLINASG  116 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag  116 (214)
                      +.     ...+|+|||+++
T Consensus       126 ~~-----~~~~d~Vi~~~~  139 (378)
T PLN00016        126 VA-----GAGFDVVYDNNG  139 (378)
T ss_pred             hc-----cCCccEEEeCCC
Confidence            31     136899999875

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.61  E-value=1.6e-07  Score=80.41  Aligned_cols=130  Identities=18%  Similarity=0.248  Sum_probs=88.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCC-cEEEEeecCCCCc---ccccc---------hhhcC---CCceeEEEec
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDK-GCVIATCRNPNGA---TGLLD---------LKNRF---PERLDVLQLD   87 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~-~~vi~~~r~~~~~---~~~~~---------~~~~~---~~~~~~~~~D   87 (214)
                      ..+++|+++||||||++|+.+++++++.-.+ .+|.++-|....-   +++.+         +.+..   -.++..+.+|
T Consensus         8 ~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD   87 (467)
T KOG1221|consen    8 QFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD   87 (467)
T ss_pred             HHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence            3478999999999999999999999987533 2466666654321   11111         11111   2478889999


Q ss_pred             CCCHH------HHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHh
Q 028056           88 LTVES------TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLK  161 (214)
Q Consensus        88 l~~~~------~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~  161 (214)
                      +++++      +...++       ..+|++||+|+...          +    .|.++..+.+|..|+..+.+.+.... 
T Consensus        88 i~~~~LGis~~D~~~l~-------~eV~ivih~AAtvr----------F----de~l~~al~iNt~Gt~~~l~lak~~~-  145 (467)
T KOG1221|consen   88 ISEPDLGISESDLRTLA-------DEVNIVIHSAATVR----------F----DEPLDVALGINTRGTRNVLQLAKEMV-  145 (467)
T ss_pred             ccCcccCCChHHHHHHH-------hcCCEEEEeeeeec----------c----chhhhhhhhhhhHhHHHHHHHHHHhh-
Confidence            98754      222222       37899999999754          1    24456679999999999999876443 


Q ss_pred             cCCCCCCCCceEEEEeecCccc
Q 028056          162 VGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       162 ~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +-.        .++.+|+....
T Consensus       146 ~l~--------~~vhVSTAy~n  159 (467)
T KOG1221|consen  146 KLK--------ALVHVSTAYSN  159 (467)
T ss_pred             hhh--------eEEEeehhhee
Confidence            222        78888887654

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.61  E-value=1.5e-07  Score=72.55  Aligned_cols=85  Identities=18%  Similarity=0.153  Sum_probs=63.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++++++|+||+|++|+.+++.|++.|++  |++.+|+.++++.+.+.+.+. .......+|..+.+++.+.++    
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~--V~l~~R~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~----   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGAR--VVLVGRDLERAQKAADSLRAR-FGEGVGAVETSDDAARAAAIK----   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhh-cCCcEEEeeCCCHHHHHHHHh----
Confidence            4678999999999999999999999999986  888899877655544433211 134456678888887766664    


Q ss_pred             HcCCccEEEECcccc
Q 028056          104 KYGSLNLLINASGIL  118 (214)
Q Consensus       104 ~~~~vd~lv~nag~~  118 (214)
                         ..|++|++....
T Consensus        97 ---~~diVi~at~~g  108 (194)
T cd01078          97 ---GADVVFAAGAAG  108 (194)
T ss_pred             ---cCCEEEECCCCC
Confidence               569888876543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.54  E-value=5.2e-07  Score=71.34  Aligned_cols=95  Identities=11%  Similarity=0.162  Sum_probs=58.3

Q ss_pred             cEEEEecCCC-chhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASR-GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~-giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      .+-.||+.|+ +||.++|++|+++|++  |++++|+..... .      ...++.++.++     +.+++.+.+.+.++.
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~--V~li~r~~~~~~-~------~~~~v~~i~v~-----s~~~m~~~l~~~~~~   81 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHE--VTLVTTKTAVKP-E------PHPNLSIIEIE-----NVDDLLETLEPLVKD   81 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCE--EEEEECcccccC-C------CCCCeEEEEEe-----cHHHHHHHHHHHhcC
Confidence            4677887665 5999999999999997  888876542110 0      01245555542     223333444444567


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheee
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV  144 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (214)
                      +|++|||||...       ..+....+++++.+.+++
T Consensus        82 ~DivIh~AAvsd-------~~~~~~~~~~~~~~~~~v  111 (229)
T PRK06732         82 HDVLIHSMAVSD-------YTPVYMTDLEEVSASDNL  111 (229)
T ss_pred             CCEEEeCCccCC-------ceehhhhhhhhhhhhhhh
Confidence            999999999864       223334445555555444

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.42  E-value=4.8e-06  Score=66.72  Aligned_cols=143  Identities=20%  Similarity=0.144  Sum_probs=100.1

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++.|-++-|.||||.+|+-++.+|++.|-+  ||+=.|..+.--.-.+.+.+. +++.+...|+.|+++|+++++     
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQ--viiPyR~d~~~~r~lkvmGdL-GQvl~~~fd~~DedSIr~vvk-----  129 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQ--VIIPYRGDEYDPRHLKVMGDL-GQVLFMKFDLRDEDSIRAVVK-----  129 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCe--EEEeccCCccchhheeecccc-cceeeeccCCCCHHHHHHHHH-----
Confidence            456778889999999999999999999998  888887665322111222222 469999999999999999888     


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                        .-+++||--|--.         .....+      .-++|+.++=.+++.+-    +.+.-      ++|.+|+..+. 
T Consensus       130 --~sNVVINLIGrd~---------eTknf~------f~Dvn~~~aerlArick----e~GVe------rfIhvS~Lgan-  181 (391)
T KOG2865|consen  130 --HSNVVINLIGRDY---------ETKNFS------FEDVNVHIAERLARICK----EAGVE------RFIHVSCLGAN-  181 (391)
T ss_pred             --hCcEEEEeecccc---------ccCCcc------cccccchHHHHHHHHHH----hhChh------heeehhhcccc-
Confidence              4599999998532         111222      34678888777777663    33332      88999987632 


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHH
Q 028056          185 GDNRLGGWHSYRASKAALNQCKI  207 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~  207 (214)
                          ....+-|--+|++-+--++
T Consensus       182 ----v~s~Sr~LrsK~~gE~aVr  200 (391)
T KOG2865|consen  182 ----VKSPSRMLRSKAAGEEAVR  200 (391)
T ss_pred             ----ccChHHHHHhhhhhHHHHH
Confidence                3445677777777665544

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.34  E-value=1.4e-05  Score=63.10  Aligned_cols=75  Identities=20%  Similarity=0.231  Sum_probs=57.6

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~  110 (214)
                      |+|+||+|.+|+.+++.|++.+++  |.++.|+..+  ...+.+..  ..++.+.+|+.|.+++.++++       .+|.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~--V~~l~R~~~~--~~~~~l~~--~g~~vv~~d~~~~~~l~~al~-------g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFS--VRALVRDPSS--DRAQQLQA--LGAEVVEADYDDPESLVAALK-------GVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGC--EEEEESSSHH--HHHHHHHH--TTTEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCC--cEEEEeccch--hhhhhhhc--ccceEeecccCCHHHHHHHHc-------CCce
Confidence            689999999999999999998887  9999998832  12222222  245678999999999988887       7899


Q ss_pred             EEECcccc
Q 028056          111 LINASGIL  118 (214)
Q Consensus       111 lv~nag~~  118 (214)
                      ++++.+..
T Consensus        68 v~~~~~~~   75 (233)
T PF05368_consen   68 VFSVTPPS   75 (233)
T ss_dssp             EEEESSCS
T ss_pred             EEeecCcc
Confidence            99888754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.30  E-value=1.8e-05  Score=69.35  Aligned_cols=171  Identities=22%  Similarity=0.214  Sum_probs=102.7

Q ss_pred             cccccccCcEEEEecCC-CchhHHHHHHHHhcCCCcEEEEeecCCCC--cccccchhhc---CCCceeEEEecCCCHHHH
Q 028056           21 SASVKWKGGVSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNR---FPERLDVLQLDLTVESTI   94 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s-~giG~~~a~~l~~~g~~~~vi~~~r~~~~--~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v   94 (214)
                      +.....+++++||||++ +.||.+++..|+..|+.  ||++..+-.+  .+....+..+   .+.....+.+++++-.+|
T Consensus       389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAt--VI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDV  466 (866)
T COG4982         389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGAT--VIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDV  466 (866)
T ss_pred             CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcE--EEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhH
Confidence            34466789999999999 78999999999999997  7777665433  2223333333   344667778999999999


Q ss_pred             HHHHHHHHHH----cC----------CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHH
Q 028056           95 EASAKSIKEK----YG----------SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLL  160 (214)
Q Consensus        95 ~~~~~~~~~~----~~----------~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  160 (214)
                      +.+++.+-+.    .+          .+|.+|--|....       .+.+.+..+. -+..+++.++....++-.+.+.-
T Consensus       467 dAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v-------~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~  538 (866)
T COG4982         467 DALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV-------SGELADAGSR-AEFAMRILLWNVLRLIGGLKKQG  538 (866)
T ss_pred             HHHHHHhccccccccCCcceecccccCcceeeecccCCc-------cCccccCCch-HHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999988542    11          2566665555432       2333333321 23335555555555544443321


Q ss_pred             hcCCCCCCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHH
Q 028056          161 KVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       161 ~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~  208 (214)
                        ...|.++....|+=.|.=.|.     +.+...|+-+|++++.+..=
T Consensus       539 --s~r~v~~R~hVVLPgSPNrG~-----FGgDGaYgEsK~aldav~~R  579 (866)
T COG4982         539 --SSRGVDTRLHVVLPGSPNRGM-----FGGDGAYGESKLALDAVVNR  579 (866)
T ss_pred             --cccCcccceEEEecCCCCCCc-----cCCCcchhhHHHHHHHHHHH
Confidence              122222322222222222222     45567999999999996543

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.30  E-value=1e-06  Score=70.18  Aligned_cols=36  Identities=25%  Similarity=0.367  Sum_probs=32.4

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      ++||||||.||++++.+|.+.|..  |.+++|++.+.+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~--v~iltR~~~~~~   36 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQ--VTILTRRPPKAS   36 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCe--EEEEEcCCcchh
Confidence            589999999999999999999997  999999987643

>PRK09620 hypothetical protein; Provisional

Probab=98.30  E-value=2.5e-06  Score=67.37  Aligned_cols=83  Identities=16%  Similarity=0.142  Sum_probs=50.6

Q ss_pred             ccCcEEEEecCC----------------CchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCC
Q 028056           26 WKGGVSLVQGAS----------------RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT   89 (214)
Q Consensus        26 l~~k~vlItG~s----------------~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~   89 (214)
                      |+||+||||+|.                |.||.++|++|+++|+.  |+++++........  ..  .+.+...+..|..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~--V~li~g~~~~~~~~--~~--~~~~~~~V~s~~d   74 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAH--VIYLHGYFAEKPND--IN--NQLELHPFEGIID   74 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCe--EEEEeCCCcCCCcc--cC--CceeEEEEecHHH
Confidence            579999999886                99999999999999998  77666432211100  00  0112333443222


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECccccC
Q 028056           90 VESTIEASAKSIKEKYGSLNLLINASGILS  119 (214)
Q Consensus        90 ~~~~v~~~~~~~~~~~~~vd~lv~nag~~~  119 (214)
                      ..+.+.+++    +. ..+|++||+|+..-
T Consensus        75 ~~~~l~~~~----~~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         75 LQDKMKSII----TH-EKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHHHHh----cc-cCCCEEEECccccc
Confidence            222333222    21 26899999999864

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.29  E-value=2.8e-06  Score=71.62  Aligned_cols=79  Identities=27%  Similarity=0.323  Sum_probs=65.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      +.+||.|+ |++|+.+|..|+++|.. .|.+.+|+.++..++.+..   +.++.+.++|+.|.+++.++++       ..
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~-~V~iAdRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~-------~~   69 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDG-EVTIADRSKEKCARIAELI---GGKVEALQVDAADVDALVALIK-------DF   69 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHh-------cC
Confidence            57899999 99999999999999942 4999999988766654443   3489999999999999888877       44


Q ss_pred             cEEEECccccC
Q 028056          109 NLLINASGILS  119 (214)
Q Consensus       109 d~lv~nag~~~  119 (214)
                      |++||++....
T Consensus        70 d~VIn~~p~~~   80 (389)
T COG1748          70 DLVINAAPPFV   80 (389)
T ss_pred             CEEEEeCCchh
Confidence            99999997653

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.28  E-value=2.2e-05  Score=63.08  Aligned_cols=131  Identities=23%  Similarity=0.260  Sum_probs=89.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      .++||||||.+|.+++++|.++|.+  |.+..|+++......       ..+.+...|+.++..+...++       .+|
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~--v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G~~   65 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHE--VRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------GVD   65 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCE--EEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence            6899999999999999999999987  999999998755433       468889999999999988777       678


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCC
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL  189 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~  189 (214)
                      .+++..+... +     ....           ............+...     .+.      ..++.+|...+..     
T Consensus        66 ~~~~i~~~~~-~-----~~~~-----------~~~~~~~~~~~a~~a~-----~~~------~~~~~~s~~~~~~-----  112 (275)
T COG0702          66 GVLLISGLLD-G-----SDAF-----------RAVQVTAVVRAAEAAG-----AGV------KHGVSLSVLGADA-----  112 (275)
T ss_pred             EEEEEecccc-c-----ccch-----------hHHHHHHHHHHHHHhc-----CCc------eEEEEeccCCCCC-----
Confidence            8777776431 0     0001           1111233333333322     111      1566666654432     


Q ss_pred             CCcchhhhhHHHHHHHHHHh
Q 028056          190 GGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       190 ~~~~~Y~asKaa~~~~~~~l  209 (214)
                      .....|..+|...+...++.
T Consensus       113 ~~~~~~~~~~~~~e~~l~~s  132 (275)
T COG0702         113 ASPSALARAKAAVEAALRSS  132 (275)
T ss_pred             CCccHHHHHHHHHHHHHHhc
Confidence            23468999999988877654

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.23  E-value=6.3e-06  Score=67.82  Aligned_cols=81  Identities=17%  Similarity=0.192  Sum_probs=66.3

Q ss_pred             EEEEecCCCchhHHHHHHHHh----cCCCcEEEEeecCCCCcccccchhhcCC----CceeEEEecCCCHHHHHHHHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLE----KNDKGCVIATCRNPNGATGLLDLKNRFP----ERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~----~g~~~~vi~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      -++|.||||.-|.-+++++++    .|.+  +.+.+||++++++..+...+..    ....++.||.+|++++.+++.+.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~s--lavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLS--LAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCce--EEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh
Confidence            579999999999999999999    6776  9999999999888555544332    13347889999999999998844


Q ss_pred             HHHcCCccEEEECccccC
Q 028056          102 KEKYGSLNLLINASGILS  119 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~  119 (214)
                             .++|||+|...
T Consensus        85 -------~vivN~vGPyR   95 (423)
T KOG2733|consen   85 -------RVIVNCVGPYR   95 (423)
T ss_pred             -------EEEEeccccce
Confidence                   89999999754

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.20  E-value=3.2e-06  Score=61.36  Aligned_cols=79  Identities=23%  Similarity=0.218  Sum_probs=57.6

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++++++|.|+ ||.|++++..|++.|++ .|.+++|+.++++.+.+.+.  +.++.++  ++.+..   +..      
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~-~i~i~nRt~~ra~~l~~~~~--~~~~~~~--~~~~~~---~~~------   73 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAK-EITIVNRTPERAEALAEEFG--GVNIEAI--PLEDLE---EAL------   73 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSS-EEEEEESSHHHHHHHHHHHT--GCSEEEE--EGGGHC---HHH------
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCC-EEEEEECCHHHHHHHHHHcC--cccccee--eHHHHH---HHH------
Confidence            689999999998 89999999999999998 89999999887666555541  2234444  333332   222      


Q ss_pred             cCCccEEEECccccC
Q 028056          105 YGSLNLLINASGILS  119 (214)
Q Consensus       105 ~~~vd~lv~nag~~~  119 (214)
                       ...|++|++.+...
T Consensus        74 -~~~DivI~aT~~~~   87 (135)
T PF01488_consen   74 -QEADIVINATPSGM   87 (135)
T ss_dssp             -HTESEEEE-SSTTS
T ss_pred             -hhCCeEEEecCCCC
Confidence             36899999998653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.18  E-value=3e-05  Score=65.67  Aligned_cols=133  Identities=20%  Similarity=0.175  Sum_probs=85.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ...+..+|+|+||||++|+-+++.|.++|+.  |-+..|+.++.+.+.. +........-+..|...+.++.....   +
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~--vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~---~  148 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFS--VRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLV---E  148 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCe--eeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhh---h
Confidence            3456689999999999999999999999987  9999999887665443 11112233444555555544432222   2


Q ss_pred             HcC-CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          104 KYG-SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       104 ~~~-~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ..+ ...+++.++|.-+       ..   +    +......+...|+..+.+++...    +..      +++.++++.+
T Consensus       149 ~~~~~~~~v~~~~ggrp-------~~---e----d~~~p~~VD~~g~knlvdA~~~a----Gvk------~~vlv~si~~  204 (411)
T KOG1203|consen  149 AVPKGVVIVIKGAGGRP-------EE---E----DIVTPEKVDYEGTKNLVDACKKA----GVK------RVVLVGSIGG  204 (411)
T ss_pred             hccccceeEEecccCCC-------Cc---c----cCCCcceecHHHHHHHHHHHHHh----CCc------eEEEEEeecC
Confidence            212 2456777776543       11   0    22233567788898998888333    322      8899999887


Q ss_pred             cCCC
Q 028056          183 SIGD  186 (214)
Q Consensus       183 ~~~~  186 (214)
                      ...+
T Consensus       205 ~~~~  208 (411)
T KOG1203|consen  205 TKFN  208 (411)
T ss_pred             cccC
Confidence            6654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.17  E-value=3.5e-06  Score=71.74  Aligned_cols=78  Identities=24%  Similarity=0.372  Sum_probs=58.2

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~  110 (214)
                      |+|.|+ |.+|+.+++.|++++....|++.+|+.++++.+.+..  .+.++.++++|+.|.+++.++++       ..|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCE
Confidence            689999 9999999999999875224999999998766544332  35689999999999999887776       5599


Q ss_pred             EEECcccc
Q 028056          111 LINASGIL  118 (214)
Q Consensus       111 lv~nag~~  118 (214)
                      +||++|..
T Consensus        71 Vin~~gp~   78 (386)
T PF03435_consen   71 VINCAGPF   78 (386)
T ss_dssp             EEE-SSGG
T ss_pred             EEECCccc
Confidence            99999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.15  E-value=1.2e-05  Score=62.40  Aligned_cols=133  Identities=14%  Similarity=0.015  Sum_probs=82.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCc-EEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      ++++|||++|-.|+++.+.+.+.|... ..++.+                     --.+|+++.++++.+|++.     +
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~---------------------skd~DLt~~a~t~~lF~~e-----k   55 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG---------------------SKDADLTNLADTRALFESE-----K   55 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEec---------------------cccccccchHHHHHHHhcc-----C
Confidence            689999999999999999999988740 122111                     1247999999999999977     6


Q ss_pred             ccEEEECccccCCCCCCCCCcch--hhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          108 LNLLINASGILSIPNVLQPETTL--NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +.++||.|+-.+        +.+  .....+-+...+++|    -.+++.+-.+-.+          .++.+.|.|-...
T Consensus        56 PthVIhlAAmVG--------Glf~N~~ynldF~r~Nl~in----dNVlhsa~e~gv~----------K~vsclStCIfPd  113 (315)
T KOG1431|consen   56 PTHVIHLAAMVG--------GLFHNNTYNLDFIRKNLQIN----DNVLHSAHEHGVK----------KVVSCLSTCIFPD  113 (315)
T ss_pred             CceeeehHhhhc--------chhhcCCCchHHHhhcceec----hhHHHHHHHhchh----------hhhhhcceeecCC
Confidence            788888886543        222  223334444444444    3333433322111          3444444443221


Q ss_pred             -------------CCCCCCcchhhhhHHHHHHHHHHh
Q 028056          186 -------------DNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       186 -------------~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                                   ..+-+..-.|+-+|..+.-.++..
T Consensus       114 kt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY  150 (315)
T KOG1431|consen  114 KTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAY  150 (315)
T ss_pred             CCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHH
Confidence                         123455678899998777766766

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.10  E-value=7.6e-06  Score=68.09  Aligned_cols=76  Identities=14%  Similarity=0.160  Sum_probs=53.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++++|+++||||+|.||+.+|++|+++ |.. .+++.+|+.++++.+.+.+.         ..|+.   ++.       
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~-~lilv~R~~~rl~~La~el~---------~~~i~---~l~-------  210 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVA-ELLLVARQQERLQELQAELG---------GGKIL---SLE-------  210 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCC-EEEEEcCCHHHHHHHHHHhc---------cccHH---hHH-------
Confidence            3688999999999999999999999864 654 59999998766554332221         12222   122       


Q ss_pred             HHcCCccEEEECccccC
Q 028056          103 EKYGSLNLLINASGILS  119 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~  119 (214)
                      +.+...|++||.++...
T Consensus       211 ~~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        211 EALPEADIVVWVASMPK  227 (340)
T ss_pred             HHHccCCEEEECCcCCc
Confidence            33457899999998753

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.01  E-value=1.2e-05  Score=69.80  Aligned_cols=77  Identities=25%  Similarity=0.296  Sum_probs=55.9

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++++|+++|+|+++ +|.++|+.|++.|++  |.+.+++.. ..+...+.+.+.  .+.++.+|..+.            
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~--V~~~d~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~------------   64 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAK--VILTDEKEEDQLKEALEELGEL--GIELVLGEYPEE------------   64 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCE--EEEEeCCchHHHHHHHHHHHhc--CCEEEeCCcchh------------
Confidence            57899999999888 999999999999997  888888752 222222222222  355777787751            


Q ss_pred             HcCCccEEEECcccc
Q 028056          104 KYGSLNLLINASGIL  118 (214)
Q Consensus       104 ~~~~vd~lv~nag~~  118 (214)
                      ..+.+|+||+++|..
T Consensus        65 ~~~~~d~vv~~~g~~   79 (450)
T PRK14106         65 FLEGVDLVVVSPGVP   79 (450)
T ss_pred             HhhcCCEEEECCCCC
Confidence            124789999999874

>PLN00106 malate dehydrogenase

Probab=98.00  E-value=3.9e-05  Score=63.67  Aligned_cols=151  Identities=11%  Similarity=0.018  Sum_probs=88.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      .++|.|+|++|.+|..++..++..+....++++++++.. .+..++.... ...  ...++++.+++.+.+       ..
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~-g~a~Dl~~~~-~~~--~i~~~~~~~d~~~~l-------~~   86 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP-GVAADVSHIN-TPA--QVRGFLGDDQLGDAL-------KG   86 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC-eeEchhhhCC-cCc--eEEEEeCCCCHHHHc-------CC
Confidence            368999999999999999999977764469999998822 1122322111 111  222443333333333       37


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc----c
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG----S  183 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~----~  183 (214)
                      .|++|+.||...        .+     ...+++.+..|+.....+.+.    +.+.+..     ..++++|....    .
T Consensus        87 aDiVVitAG~~~--------~~-----g~~R~dll~~N~~i~~~i~~~----i~~~~p~-----aivivvSNPvD~~~~i  144 (323)
T PLN00106         87 ADLVIIPAGVPR--------KP-----GMTRDDLFNINAGIVKTLCEA----VAKHCPN-----ALVNIISNPVNSTVPI  144 (323)
T ss_pred             CCEEEEeCCCCC--------CC-----CCCHHHHHHHHHHHHHHHHHH----HHHHCCC-----eEEEEeCCCccccHHH
Confidence            899999999754        11     122444566666665555554    4444433     26666666553    1


Q ss_pred             C-----CCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          184 I-----GDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       184 ~-----~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      .     ...+++....|+.++.-...|...+++
T Consensus       145 ~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~  177 (323)
T PLN00106        145 AAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAE  177 (323)
T ss_pred             HHHHHHHcCCCCcceEEEEecchHHHHHHHHHH
Confidence            1     112356678888887555556665543

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.95  E-value=6.9e-05  Score=62.14  Aligned_cols=143  Identities=13%  Similarity=0.053  Sum_probs=81.5

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      ++.+++.|+|++|.+|..++..++..+....+++++++.... +..++.....   .....+.+|+.++.+.++      
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g-~a~Dl~~~~~---~~~v~~~td~~~~~~~l~------   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPG-VAADLSHIDT---PAKVTGYADGELWEKALR------   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcc-cccchhhcCc---CceEEEecCCCchHHHhC------
Confidence            456799999999999999999998766544699999832211 1223222111   223345655444332233      


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC-cccC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR-VGSI  184 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~-~~~~  184 (214)
                       ..|++|+++|...        .+     .+.+...+..|+...    +.+.+.|++.+..      ++|.++|- ....
T Consensus        76 -gaDvVVitaG~~~--------~~-----~~tR~dll~~N~~i~----~~i~~~i~~~~~~------~iviv~SNPvdv~  131 (321)
T PTZ00325         76 -GADLVLICAGVPR--------KP-----GMTRDDLFNTNAPIV----RDLVAAVASSAPK------AIVGIVSNPVNST  131 (321)
T ss_pred             -CCCEEEECCCCCC--------CC-----CCCHHHHHHHHHHHH----HHHHHHHHHHCCC------eEEEEecCcHHHH
Confidence             7899999999753        11     122344566666555    4445555555544      55555552 2211


Q ss_pred             ---------CCCCCCCcchhhhhHHHHHH
Q 028056          185 ---------GDNRLGGWHSYRASKAALNQ  204 (214)
Q Consensus       185 ---------~~~~~~~~~~Y~asKaa~~~  204 (214)
                               ....++....|+.+  .+++
T Consensus       132 ~~~~~~~~~~~sg~p~~~viG~g--~LDs  158 (321)
T PTZ00325        132 VPIAAETLKKAGVYDPRKLFGVT--TLDV  158 (321)
T ss_pred             HHHHHhhhhhccCCChhheeech--hHHH
Confidence                     11124556677776  2555

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.91  E-value=0.00014  Score=57.32  Aligned_cols=153  Identities=18%  Similarity=0.135  Sum_probs=99.7

Q ss_pred             cccc-CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc--cccchhh----cCCCceeEEEecCCCHHHHHH
Q 028056           24 VKWK-GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GLLDLKN----RFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        24 ~~l~-~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~--~~~~~~~----~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      -.++ .|++||||-+|-=|.-++..|+..|+.  |.-.-|......  +++-+..    -.+......-+|++|...+.+
T Consensus        23 ~~~r~rkvALITGItGQDGSYLaEfLL~KgYe--VHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k  100 (376)
T KOG1372|consen   23 GAFRPRKVALITGITGQDGSYLAEFLLSKGYE--VHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIK  100 (376)
T ss_pred             cCcccceEEEEecccCCCchHHHHHHHhCCce--eeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHH
Confidence            3444 469999999999999999999999998  655444433322  2322221    123467778899999999999


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      ++..+     .++-+.|-|+...           ...+.+-.+..-++...|++.++.++...-...+       .++--
T Consensus       101 ~I~~i-----kPtEiYnLaAQSH-----------VkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~-------VrfYQ  157 (376)
T KOG1372|consen  101 LISTI-----KPTEVYNLAAQSH-----------VKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK-------VRFYQ  157 (376)
T ss_pred             HHhcc-----Cchhhhhhhhhcc-----------eEEEeecccceeeccchhhhhHHHHHHhcCcccc-------eeEEe
Confidence            99988     6677777776443           3344444555678889999999888755433322       13322


Q ss_pred             e--ecCcccC-C-----CCCCCCcchhhhhHHH
Q 028056          177 L--SARVGSI-G-----DNRLGGWHSYRASKAA  201 (214)
Q Consensus       177 i--ss~~~~~-~-----~~~~~~~~~Y~asKaa  201 (214)
                      -  |-..|-. .     ..|.-+.++|+++|..
T Consensus       158 AstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy  190 (376)
T KOG1372|consen  158 ASTSELYGKVQEIPQSETTPFYPRSPYAAAKMY  190 (376)
T ss_pred             cccHhhcccccCCCcccCCCCCCCChhHHhhhh
Confidence            2  2233311 1     1245667899999964

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.85  E-value=8e-05  Score=58.30  Aligned_cols=152  Identities=20%  Similarity=0.121  Sum_probs=97.4

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +-+-..+||||+-|-+|..+|..|..+..+.+||+.+.-.......     +.|   -++-.|+-|...+++++-.    
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~-----~~G---PyIy~DILD~K~L~eIVVn----  108 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT-----DVG---PYIYLDILDQKSLEEIVVN----  108 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc-----ccC---CchhhhhhccccHHHhhcc----
Confidence            3456899999999999999999887665544788877654432111     112   2455677776666655431    


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                       .++|-+||-.+...            ..-+.+.--..++|+.|...+++.+..+-.           .+..-|++.+..
T Consensus       109 -~RIdWL~HfSALLS------------AvGE~NVpLA~~VNI~GvHNil~vAa~~kL-----------~iFVPSTIGAFG  164 (366)
T KOG2774|consen  109 -KRIDWLVHFSALLS------------AVGETNVPLALQVNIRGVHNILQVAAKHKL-----------KVFVPSTIGAFG  164 (366)
T ss_pred             -cccceeeeHHHHHH------------HhcccCCceeeeecchhhhHHHHHHHHcCe-----------eEeecccccccC
Confidence             38999999776543            112233344589999999999998876532           333345444444


Q ss_pred             CC---CCC------CCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GD---NRL------GGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~---~~~------~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +.   +|.      -+...|+.||--.+.+-+.+ ..|
T Consensus       165 PtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrF  202 (366)
T KOG2774|consen  165 PTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRF  202 (366)
T ss_pred             CCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhhc
Confidence            32   122      23578999998777776655 444

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.78  E-value=0.00019  Score=59.72  Aligned_cols=119  Identities=13%  Similarity=0.113  Sum_probs=65.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCC-----cEEEEeecCCCC--ccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDK-----GCVIATCRNPNG--ATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~-----~~vi~~~r~~~~--~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +++|||++|.+|.+++..|+..+.-     ..|+++++++..  ++. ..++...    ......|+....+..      
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~----~~~~~~~~~~~~~~~------   73 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC----AFPLLKSVVATTDPE------   73 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc----cccccCCceecCCHH------
Confidence            5899999999999999999985531     149999986632  221 1111100    000111332222222      


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeecC
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSAR  180 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss~  180 (214)
                       +.+...|+|||.||...        .+  ..+.   .+.++.    ...+.+.+.+.+.+.. .+     +.++.+|..
T Consensus        74 -~~l~~aDiVI~tAG~~~--------~~--~~~R---~~l~~~----N~~i~~~i~~~i~~~~~~~-----~iiivvsNP  130 (325)
T cd01336          74 -EAFKDVDVAILVGAMPR--------KE--GMER---KDLLKA----NVKIFKEQGEALDKYAKKN-----VKVLVVGNP  130 (325)
T ss_pred             -HHhCCCCEEEEeCCcCC--------CC--CCCH---HHHHHH----HHHHHHHHHHHHHHhCCCC-----eEEEEecCc
Confidence             22247899999999754        11  1122   222333    3455666666666652 22     377777764


Q ss_pred             c
Q 028056          181 V  181 (214)
Q Consensus       181 ~  181 (214)
                      .
T Consensus       131 v  131 (325)
T cd01336         131 A  131 (325)
T ss_pred             H
Confidence            3

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.73  E-value=0.00023  Score=61.75  Aligned_cols=114  Identities=12%  Similarity=0.008  Sum_probs=70.2

Q ss_pred             CcEEE----EecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           28 GGVSL----VQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        28 ~k~vl----ItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |..++    |+||++|+|.+++..+...|+.  |+...+.+.+...                                 .
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~--v~~~~~~~~~~~~---------------------------------~   78 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYD--VVANNDGGLTWAA---------------------------------G   78 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCe--eeecCcccccccc---------------------------------C
Confidence            34555    7888899999999999999997  7665544331100                                 0


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      ...+++.+|.-+....              ++++        +.+.+.+++..++.|...        ++||++++..+.
T Consensus        79 ~~~~~~~~~~d~~~~~--------------~~~~--------l~~~~~~~~~~l~~l~~~--------griv~i~s~~~~  128 (450)
T PRK08261         79 WGDRFGALVFDATGIT--------------DPAD--------LKALYEFFHPVLRSLAPC--------GRVVVLGRPPEA  128 (450)
T ss_pred             cCCcccEEEEECCCCC--------------CHHH--------HHHHHHHHHHHHHhccCC--------CEEEEEcccccc
Confidence            0113333332221110              0111        224445667777777543        299999997664


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+      ...|+++|+++.++++++ .|+
T Consensus       129 ~~------~~~~~~akaal~gl~rsla~E~  152 (450)
T PRK08261        129 AA------DPAAAAAQRALEGFTRSLGKEL  152 (450)
T ss_pred             CC------chHHHHHHHHHHHHHHHHHHHh
Confidence            33      236999999999999999 554

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.73  E-value=0.00051  Score=51.87  Aligned_cols=72  Identities=22%  Similarity=0.265  Sum_probs=59.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      .+.|.|+||..|..++++..++|..  |....||+.+....        ..+..++.|+.|++++.+.+.       ..|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHe--VTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~-------g~D   64 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHE--VTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA-------GHD   64 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCe--eEEEEeChHhcccc--------ccceeecccccChhhhHhhhc-------CCc
Confidence            5789999999999999999999998  99999999875432        345678899999998754444       789


Q ss_pred             EEEECcccc
Q 028056          110 LLINASGIL  118 (214)
Q Consensus       110 ~lv~nag~~  118 (214)
                      +||..-+..
T Consensus        65 aVIsA~~~~   73 (211)
T COG2910          65 AVISAFGAG   73 (211)
T ss_pred             eEEEeccCC
Confidence            999988865

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.72  E-value=0.00024  Score=54.28  Aligned_cols=78  Identities=18%  Similarity=0.281  Sum_probs=46.3

Q ss_pred             ccCcEEEEecC----------------CCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCC
Q 028056           26 WKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT   89 (214)
Q Consensus        26 l~~k~vlItG~----------------s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~   89 (214)
                      |+||+||||+|                ||.+|.++|+++..+|++  |+++.... ...        .+..+..+  ++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~--V~li~g~~-~~~--------~p~~~~~i--~v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAE--VTLIHGPS-SLP--------PPPGVKVI--RVE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-E--EEEEE-TT-S------------TTEEEE--E-S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCE--EEEEecCc-ccc--------ccccceEE--Eec
Confidence            57888888876                688999999999999998  77777653 211        02234444  455


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECccccC
Q 028056           90 VESTIEASAKSIKEKYGSLNLLINASGILS  119 (214)
Q Consensus        90 ~~~~v~~~~~~~~~~~~~vd~lv~nag~~~  119 (214)
                      +.++.   ++.+.+.++.-|++|++|++.-
T Consensus        68 sa~em---~~~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   68 SAEEM---LEAVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             SHHHH---HHHHHHHGGGGSEEEE-SB--S
T ss_pred             chhhh---hhhhccccCcceeEEEecchhh
Confidence            55544   4444454555699999999864

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.59  E-value=0.00011  Score=63.75  Aligned_cols=80  Identities=16%  Similarity=0.154  Sum_probs=51.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++|+++|||+++ +|.++|+.|++.|++  |++.+++........+.+.+.+  +.+...+  +...+   .+    
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~--V~~~d~~~~~~~~~~~~l~~~g--~~~~~~~--~~~~~---~~----   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGAN--VTVNDGKPFSENPEAQELLEEG--IKVICGS--HPLEL---LD----   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCE--EEEEcCCCccchhHHHHHHhcC--CEEEeCC--CCHHH---hc----
Confidence            457899999999986 999999999999997  8888876644332222232222  2222211  11221   11    


Q ss_pred             HcCCccEEEECccccC
Q 028056          104 KYGSLNLLINASGILS  119 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~  119 (214)
                        ..+|.||+++|+..
T Consensus        67 --~~~d~vV~s~gi~~   80 (447)
T PRK02472         67 --EDFDLMVKNPGIPY   80 (447)
T ss_pred             --CcCCEEEECCCCCC
Confidence              14899999999763

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.56  E-value=0.00018  Score=53.10  Aligned_cols=77  Identities=19%  Similarity=0.204  Sum_probs=52.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++++++|+|+ |++|..+++.|.+.|.. .|.+++|++++.+.+.+....   .  .+..+.++.++.          
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~-~v~v~~r~~~~~~~~~~~~~~---~--~~~~~~~~~~~~----------   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAA-KIVIVNRTLEKAKALAERFGE---L--GIAIAYLDLEEL----------   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHhh---c--ccceeecchhhc----------
Confidence            467889999998 89999999999998733 488899987765544333221   1  122334443322          


Q ss_pred             cCCccEEEECcccc
Q 028056          105 YGSLNLLINASGIL  118 (214)
Q Consensus       105 ~~~vd~lv~nag~~  118 (214)
                      ....|++|++....
T Consensus        79 ~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 LAEADLIINTTPVG   92 (155)
T ss_pred             cccCCEEEeCcCCC
Confidence            24789999999754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.52  E-value=0.00019  Score=58.49  Aligned_cols=79  Identities=27%  Similarity=0.325  Sum_probs=53.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++|+|+ ||+|++++..|+..|.. .|.+++|+.++.+.+.+...... .   +..++    +.       .+
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~-~V~v~~R~~~~a~~l~~~~~~~~-~---~~~~~----~~-------~~  181 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVA-EITIVNRTVERAEELAKLFGALG-K---AELDL----EL-------QE  181 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhhhcc-c---eeecc----cc-------hh
Confidence            3578899999997 89999999999999954 59999999877655444332211 1   11111    01       11


Q ss_pred             HcCCccEEEECccccC
Q 028056          104 KYGSLNLLINASGILS  119 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~  119 (214)
                      .....|++||+.....
T Consensus       182 ~~~~~DivInaTp~g~  197 (278)
T PRK00258        182 ELADFDLIINATSAGM  197 (278)
T ss_pred             ccccCCEEEECCcCCC
Confidence            2246899999987653

>cd00704 MDH Malate dehydrogenase

Probab=97.48  E-value=0.0016  Score=54.12  Aligned_cols=116  Identities=12%  Similarity=0.101  Sum_probs=68.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCc-----EEEEeecCC--CCcccccchhhcCCCceeEEEecCCCHH--HHH--HHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNP--NGATGLLDLKNRFPERLDVLQLDLTVES--TIE--ASA   98 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~-----~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~--~v~--~~~   98 (214)
                      .+.|+|++|.+|..++..|+..|.-.     .+++.++++  +.++              ....|+.+..  ...  .+-
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~--------------g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE--------------GVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc--------------eeeeehhhhcccccCCcEEe
Confidence            58999999999999999999876532     389999877  3322              2223333321  000  000


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEe
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANL  177 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~i  177 (214)
                      ....+.+...|++|+.||...        .+-  .+..+   .+    .....+.+.+.+.+.+.. ..     +.++++
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~--------~~g--~tR~d---ll----~~N~~i~~~i~~~i~~~~~~~-----~iiivv  125 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPR--------KPG--MERAD---LL----RKNAKIFKEQGEALNKVAKPT-----VKVLVV  125 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCC--------CcC--CcHHH---HH----HHhHHHHHHHHHHHHHhCCCC-----eEEEEe
Confidence            111223357899999999754        111  11111   22    444567777887777762 33     367777


Q ss_pred             ecCc
Q 028056          178 SARV  181 (214)
Q Consensus       178 ss~~  181 (214)
                      |...
T Consensus       126 sNPv  129 (323)
T cd00704         126 GNPA  129 (323)
T ss_pred             CCcH
Confidence            6543

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.45  E-value=0.00026  Score=57.38  Aligned_cols=75  Identities=24%  Similarity=0.319  Sum_probs=51.9

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .++|+++|+|+ ||+|++++..|++.|++  |.+++|+.++.+.+.+.+...+ .+..+..|     +.         ..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~--v~v~~R~~~~~~~la~~~~~~~-~~~~~~~~-----~~---------~~  176 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCN--VIIANRTVSKAEELAERFQRYG-EIQAFSMD-----EL---------PL  176 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHhhcC-ceEEechh-----hh---------cc
Confidence            46789999998 69999999999999986  8889998877665544443322 12222111     10         12


Q ss_pred             CCccEEEECcccc
Q 028056          106 GSLNLLINASGIL  118 (214)
Q Consensus       106 ~~vd~lv~nag~~  118 (214)
                      ...|++||+.+..
T Consensus       177 ~~~DivInatp~g  189 (270)
T TIGR00507       177 HRVDLIINATSAG  189 (270)
T ss_pred             cCccEEEECCCCC
Confidence            3689999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.33  E-value=0.0049  Score=46.44  Aligned_cols=143  Identities=15%  Similarity=0.094  Sum_probs=90.5

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .++.++++.++|.||||-.|..+.+++++.+-=..|.+..|.+.--.       +...++.-...|.+..++....+   
T Consensus        12 EDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~-------at~k~v~q~~vDf~Kl~~~a~~~---   81 (238)
T KOG4039|consen   12 EDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP-------ATDKVVAQVEVDFSKLSQLATNE---   81 (238)
T ss_pred             HHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc-------cccceeeeEEechHHHHHHHhhh---
Confidence            34778999999999999999999999999875336888887642211       11234445566776554443322   


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                          ..+|+++++-|...        +.      ...+..+++..--.+.++|.+    ++.+..      .++.+||..
T Consensus        82 ----qg~dV~FcaLgTTR--------gk------aGadgfykvDhDyvl~~A~~A----Ke~Gck------~fvLvSS~G  133 (238)
T KOG4039|consen   82 ----QGPDVLFCALGTTR--------GK------AGADGFYKVDHDYVLQLAQAA----KEKGCK------TFVLVSSAG  133 (238)
T ss_pred             ----cCCceEEEeecccc--------cc------cccCceEeechHHHHHHHHHH----HhCCCe------EEEEEeccC
Confidence                37899999988653        11      112334555554455555543    555654      888899865


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHH
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKI  207 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~  207 (214)
                      +...     ....|--.|.-++.=..
T Consensus       134 Ad~s-----SrFlY~k~KGEvE~~v~  154 (238)
T KOG4039|consen  134 ADPS-----SRFLYMKMKGEVERDVI  154 (238)
T ss_pred             CCcc-----cceeeeeccchhhhhhh
Confidence            5433     33567677766665443

>PRK05086 malate dehydrogenase; Provisional

Probab=97.27  E-value=0.0042  Score=51.51  Aligned_cols=37  Identities=24%  Similarity=0.101  Sum_probs=28.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPN   65 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~-~g~~~~vi~~~r~~~   65 (214)
                      +.++|.||+|++|.+++..+.. .+....+++.++++.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            3689999999999999998855 333224788888753

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.26  E-value=0.0036  Score=52.16  Aligned_cols=118  Identities=11%  Similarity=0.046  Sum_probs=68.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCc-----EEEEeecCCCCcccccchhhcCCCceeEEEecCCCHH-HHH-HHH--HH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVES-TIE-ASA--KS  100 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~-----~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~-~~~--~~  100 (214)
                      ++.|+|++|.+|..++..++..+.-.     .+++.++++...            +...+..|+.|.. ... ...  ..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            37899999999999999998866521     388888866430            1223344554443 110 000  01


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcC-CCCCCCCceEEEEeec
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG-GTGIERDVAVVANLSA  179 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~~~~~~~iv~iss  179 (214)
                      ..+.+...|++|+.||...        .+  .   +.+.+.+    .....+.+.+.+.+.+. +..     +.++++|.
T Consensus        69 ~~~~~~~aDiVVitAG~~~--------~~--~---~tr~~ll----~~N~~i~k~i~~~i~~~~~~~-----~iiivvsN  126 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAFPR--------KE--G---MERRDLL----SKNVKIFKEQGRALDKLAKKD-----CKVLVVGN  126 (324)
T ss_pred             hHHHhCCCCEEEEcCCCCC--------CC--C---CcHHHHH----HHHHHHHHHHHHHHHhhCCCC-----eEEEEeCC
Confidence            1223457899999999753        11  1   1122333    44456667777777765 232     37777775


Q ss_pred             Cc
Q 028056          180 RV  181 (214)
Q Consensus       180 ~~  181 (214)
                      ..
T Consensus       127 Pv  128 (324)
T TIGR01758       127 PA  128 (324)
T ss_pred             cH
Confidence            43

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.26  E-value=0.00062  Score=55.61  Aligned_cols=80  Identities=20%  Similarity=0.128  Sum_probs=53.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|+++|.|+ ||.|++++..|++.|+. .|.+++|+.++.+.+.+.+... ..+  .  .+...+++       .+.
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~-~i~I~nRt~~ka~~La~~~~~~-~~~--~--~~~~~~~~-------~~~  187 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVT-DITVINRNPDKLSRLVDLGVQV-GVI--T--RLEGDSGG-------LAI  187 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHHhhhc-Ccc--e--eccchhhh-------hhc
Confidence            367899999976 89999999999999987 7999999987766554443221 111  1  11111111       112


Q ss_pred             cCCccEEEECcccc
Q 028056          105 YGSLNLLINASGIL  118 (214)
Q Consensus       105 ~~~vd~lv~nag~~  118 (214)
                      ....|+|||+....
T Consensus       188 ~~~~DiVInaTp~g  201 (282)
T TIGR01809       188 EKAAEVLVSTVPAD  201 (282)
T ss_pred             ccCCCEEEECCCCC
Confidence            24689999998754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.25  E-value=0.00064  Score=58.44  Aligned_cols=77  Identities=14%  Similarity=0.121  Sum_probs=54.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++.+|+++|.|+ |++|..+++.|+..|+. .|.+++|+.++.+.+.+..   +. ...+  +   .++.       .+.
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~-~I~V~nRt~~ra~~La~~~---~~-~~~~--~---~~~l-------~~~  239 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPK-QIMLANRTIEKAQKITSAF---RN-ASAH--Y---LSEL-------PQL  239 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHHh---cC-CeEe--c---HHHH-------HHH
Confidence            578999999999 89999999999999987 7999999877654443332   21 1111  1   1222       222


Q ss_pred             cCCccEEEECccccC
Q 028056          105 YGSLNLLINASGILS  119 (214)
Q Consensus       105 ~~~vd~lv~nag~~~  119 (214)
                      ....|++|++.+...
T Consensus       240 l~~aDiVI~aT~a~~  254 (414)
T PRK13940        240 IKKADIIIAAVNVLE  254 (414)
T ss_pred             hccCCEEEECcCCCC
Confidence            346899999998654

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.21  E-value=0.00092  Score=54.64  Aligned_cols=49  Identities=24%  Similarity=0.161  Sum_probs=40.6

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN   75 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~   75 (214)
                      ++++|+++|.|+ ||.|++++..|+..|.. .|.+++|+.++.+.+.+.+.
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~-~I~I~nR~~~ka~~la~~l~  172 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVE-RLTIFDVDPARAAALADELN  172 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHHHH
Confidence            467899999998 57999999999999986 69999999887766555443

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.18  E-value=0.0016  Score=54.58  Aligned_cols=39  Identities=21%  Similarity=0.172  Sum_probs=33.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..+++++|+|.|+ ||+|..+++.|++.|.. ++.++|++.
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg-~i~lvD~D~   58 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIG-KLTIADRDY   58 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCc
Confidence            5678899999997 67999999999999986 688888864

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.17  E-value=0.0023  Score=51.46  Aligned_cols=74  Identities=15%  Similarity=0.172  Sum_probs=52.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++|+|||+- |+.++++|.+.|.+  |+...+++...+.+.+      .....+..+..+.+++.+++++-     .+|
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~--v~~s~~t~~~~~~~~~------~g~~~v~~g~l~~~~l~~~l~~~-----~i~   67 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIE--ILVTVTTSEGKHLYPI------HQALTVHTGALDPQELREFLKRH-----SID   67 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCe--EEEEEccCCccccccc------cCCceEEECCCCHHHHHHHHHhc-----CCC
Confidence            6999999997 99999999999987  8888888765433221      11234445666776665555433     788


Q ss_pred             EEEECccc
Q 028056          110 LLINASGI  117 (214)
Q Consensus       110 ~lv~nag~  117 (214)
                      +||+.+..
T Consensus        68 ~VIDAtHP   75 (256)
T TIGR00715        68 ILVDATHP   75 (256)
T ss_pred             EEEEcCCH
Confidence            99888753

This enzyme was found to be a monomer by gel filtration.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.13  E-value=0.0016  Score=53.24  Aligned_cols=48  Identities=21%  Similarity=0.171  Sum_probs=39.9

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK   74 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~   74 (214)
                      ++++|+++|.|+ ||-+++++..|++.|+. .|.+++|+.++.+.+.+.+
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~-~i~i~nR~~~ka~~La~~~  171 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQ-KLQVADLDTSRAQALADVI  171 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHH
Confidence            456899999998 78999999999999997 6999999987766654443

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.13  E-value=0.01  Score=49.46  Aligned_cols=147  Identities=9%  Similarity=-0.009  Sum_probs=88.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCc-----EEEEeecCCCC--ccc-ccchhhcC---CCceeEEEecCCCHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNPNG--ATG-LLDLKNRF---PERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~-----~vi~~~r~~~~--~~~-~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      +.|.|+|++|.+|..++..++..|.-.     .++|.+.+++.  ++. ..++....   ..++. +.  -.+.+     
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~--~~~~~-----   74 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-IT--DDPNV-----   74 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-Ee--cCcHH-----
Confidence            478999999999999999999888754     58999986543  332 22222111   01111 11  11112     


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCC-CCCCCceEEEE
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGT-GIERDVAVVAN  176 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~~~~~~iv~  176 (214)
                            .+..-|++|..||...        .+  ..+..+   .    +.....+.+.+.+.+.+... .     +.+|+
T Consensus        75 ------~~~daDivvitaG~~~--------k~--g~tR~d---l----l~~N~~i~~~i~~~i~~~~~~~-----~iiiv  126 (322)
T cd01338          75 ------AFKDADWALLVGAKPR--------GP--GMERAD---L----LKANGKIFTAQGKALNDVASRD-----VKVLV  126 (322)
T ss_pred             ------HhCCCCEEEEeCCCCC--------CC--CCcHHH---H----HHHHHHHHHHHHHHHHhhCCCC-----eEEEE
Confidence                  2247899999999753        11  112221   1    24445667777777776542 3     37888


Q ss_pred             eecCcccCCC-----C-CCCCcchhhhhHHHHHHHHHHhcc
Q 028056          177 LSARVGSIGD-----N-RLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       177 iss~~~~~~~-----~-~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      +|........     . ..|....|+.++.--..|...+++
T Consensus       127 vsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~  167 (322)
T cd01338         127 VGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAK  167 (322)
T ss_pred             ecCcHHHHHHHHHHHcCCCChHheEEehHHHHHHHHHHHHH
Confidence            8765432211     1 156677888888887778777754

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.09  E-value=0.0042  Score=54.10  Aligned_cols=78  Identities=13%  Similarity=0.173  Sum_probs=54.4

Q ss_pred             cccCcEEEEecC----------------CCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecC
Q 028056           25 KWKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL   88 (214)
Q Consensus        25 ~l~~k~vlItG~----------------s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl   88 (214)
                      +|+||.||||+|                ||-+|.++|+++..+|++  |.+++-... +.        .+..+..+.  +
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~--VtlI~Gp~~-~~--------~p~~v~~i~--V  319 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAE--VTLISGPVD-LA--------DPQGVKVIH--V  319 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCc--EEEEeCCcC-CC--------CCCCceEEE--e
Confidence            589999999987                678999999999999999  777664332 11        123344443  3


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEECccccC
Q 028056           89 TVESTIEASAKSIKEKYGSLNLLINASGILS  119 (214)
Q Consensus        89 ~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~  119 (214)
                      .+   .+++.+.+.+.++ .|++|++|++..
T Consensus       320 ~t---a~eM~~av~~~~~-~Di~I~aAAVaD  346 (475)
T PRK13982        320 ES---ARQMLAAVEAALP-ADIAIFAAAVAD  346 (475)
T ss_pred             cC---HHHHHHHHHhhCC-CCEEEEeccccc
Confidence            33   3444555555544 699999999865

>PRK06849 hypothetical protein; Provisional

Probab=97.07  E-value=0.0034  Score=53.54  Aligned_cols=83  Identities=16%  Similarity=0.109  Sum_probs=52.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +.++|||||++..+|..+++.|.+.|.+  |++++.++........    .-.....+...-.+.+...+.+.++.++. 
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~--Vi~~d~~~~~~~~~s~----~~d~~~~~p~p~~d~~~~~~~L~~i~~~~-   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHT--VILADSLKYPLSRFSR----AVDGFYTIPSPRWDPDAYIQALLSIVQRE-   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCchHHHHHHH----hhhheEEeCCCCCCHHHHHHHHHHHHHHc-
Confidence            3589999999999999999999999997  8888877644221111    11222223222234444444444444443 


Q ss_pred             CccEEEECcc
Q 028056          107 SLNLLINASG  116 (214)
Q Consensus       107 ~vd~lv~nag  116 (214)
                      ++|++|....
T Consensus        76 ~id~vIP~~e   85 (389)
T PRK06849         76 NIDLLIPTCE   85 (389)
T ss_pred             CCCEEEECCh
Confidence            5899887664

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.07  E-value=0.00073  Score=55.48  Aligned_cols=110  Identities=16%  Similarity=0.125  Sum_probs=73.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ..++|-||+|.-|.-+|++|+++|-+  .++.+||..++..+...+   +.....+.+++  ++.+++.++       +.
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~--~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~~-------~~   72 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLT--AALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMAS-------RT   72 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCc--hhhccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHHh-------cc
Confidence            57899999999999999999999998  799999998866544433   44444454444  666655555       77


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhH
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL  159 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  159 (214)
                      ++|+||+|...     ....++.+.-...  -.--..+.|=..+++.....
T Consensus        73 ~VVlncvGPyt-----~~g~plv~aC~~~--GTdY~DiTGEi~~fe~~i~~  116 (382)
T COG3268          73 QVVLNCVGPYT-----RYGEPLVAACAAA--GTDYADITGEIMFFENSIDL  116 (382)
T ss_pred             eEEEecccccc-----ccccHHHHHHHHh--CCCeeeccccHHHHHHHHHH
Confidence            99999999653     1233443322211  12233456666666666554

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.04  E-value=0.0011  Score=53.88  Aligned_cols=81  Identities=27%  Similarity=0.282  Sum_probs=57.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .+.++++++|.|++ |-+++++..|++.|+. .|.++.|+.++++++.+...+.+..+.  ..+..+.+..+        
T Consensus       122 ~~~~~~~vlilGAG-GAarAv~~aL~~~g~~-~i~V~NRt~~ra~~La~~~~~~~~~~~--~~~~~~~~~~~--------  189 (283)
T COG0169         122 VDVTGKRVLILGAG-GAARAVAFALAEAGAK-RITVVNRTRERAEELADLFGELGAAVE--AAALADLEGLE--------  189 (283)
T ss_pred             cccCCCEEEEECCc-HHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhhhcccccc--ccccccccccc--------
Confidence            45578999999875 7999999999999986 699999999988777766654433111  12232222221        


Q ss_pred             HcCCccEEEECccccC
Q 028056          104 KYGSLNLLINASGILS  119 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~  119 (214)
                         ..|++||+....-
T Consensus       190 ---~~dliINaTp~Gm  202 (283)
T COG0169         190 ---EADLLINATPVGM  202 (283)
T ss_pred             ---ccCEEEECCCCCC
Confidence               4799999987653

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.03  E-value=0.01  Score=49.00  Aligned_cols=116  Identities=16%  Similarity=0.140  Sum_probs=69.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC----CCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF----PERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +.+.|.|+ |++|..++..|+..|....|++++++++.++.....+...    +...... .  .+.+.           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------
Confidence            36788886 8999999999999996335999999988765533322211    1222222 1  22221           


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      ....|++|+++|...        .+-  .+..+   .+    ....-+.+...+.+.+....     +.++++|...
T Consensus        66 l~~aDIVIitag~~~--------~~g--~~R~d---ll----~~N~~i~~~~~~~i~~~~~~-----~~vivvsNP~  120 (306)
T cd05291          66 CKDADIVVITAGAPQ--------KPG--ETRLD---LL----EKNAKIMKSIVPKIKASGFD-----GIFLVASNPV  120 (306)
T ss_pred             hCCCCEEEEccCCCC--------CCC--CCHHH---HH----HHHHHHHHHHHHHHHHhCCC-----eEEEEecChH
Confidence            137899999999753        111  11111   12    33455666666666665433     3777777644

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.02  E-value=0.0025  Score=49.43  Aligned_cols=40  Identities=15%  Similarity=0.156  Sum_probs=34.0

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ...+++++|+|.| .||+|..+++.|+..|.. .+.++|.+.
T Consensus        16 q~kl~~~~VlviG-~GglGs~ia~~La~~Gv~-~i~lvD~d~   55 (202)
T TIGR02356        16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAGVG-TIVIVDDDH   55 (202)
T ss_pred             HHHhcCCCEEEEC-CCHHHHHHHHHHHHcCCC-eEEEecCCE
Confidence            3567889999998 569999999999999986 688888763

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.02  E-value=0.0021  Score=52.64  Aligned_cols=40  Identities=20%  Similarity=0.130  Sum_probs=34.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      .++++|+++|.|+ ||-+++++..++..|.. .|.+++|+++
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~-~i~i~nRt~~  159 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLK-EIKLFNRRDE  159 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEeCCcc
Confidence            4568899999997 55699999999999987 7999999865

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.01  E-value=0.003  Score=53.62  Aligned_cols=77  Identities=22%  Similarity=0.121  Sum_probs=52.1

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +..++++|.|+ |.+|..+++.+...|++  |+++++++++++.+...   .+..   +..+..+.+.+.+.+       
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~--V~v~d~~~~~~~~l~~~---~g~~---v~~~~~~~~~l~~~l-------  228 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGAT--VTILDINIDRLRQLDAE---FGGR---IHTRYSNAYEIEDAV-------  228 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCe--EEEEECCHHHHHHHHHh---cCce---eEeccCCHHHHHHHH-------
Confidence            46677999977 78999999999999997  88899887654433222   1221   223445555443333       


Q ss_pred             CCccEEEECcccc
Q 028056          106 GSLNLLINASGIL  118 (214)
Q Consensus       106 ~~vd~lv~nag~~  118 (214)
                      ...|++|++++..
T Consensus       229 ~~aDvVI~a~~~~  241 (370)
T TIGR00518       229 KRADLLIGAVLIP  241 (370)
T ss_pred             ccCCEEEEccccC
Confidence            3679999998653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.00  E-value=0.012  Score=60.96  Aligned_cols=168  Identities=17%  Similarity=0.128  Sum_probs=98.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+.++.++|++.+++++..++.+|.++|+.  |+++. ..+..   ..........+-.+...-.|.+.+..++..+...
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~--v~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1825 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQ--VAVVR-SPWVV---SHSASPLASAIASVTLGTIDDTSIEAVIKDIEEK 1825 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCe--EEEee-ccccc---cccccccccccccccccccchHHHHHHHHhhhcc
Confidence            345788889888999999999999999997  54442 11111   1111111122223344445567778888888777


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      .++++.+||..+....     ........   .+...-...+...|.+.|.+.+.+...+.      ..++.++...|-.
T Consensus      1826 ~~~~~g~i~l~~~~~~-----~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~~------~~~~~vsr~~G~~ 1891 (2582)
T TIGR02813      1826 TAQIDGFIHLQPQHKS-----VADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNAR------ASFVTVSRIDGGF 1891 (2582)
T ss_pred             ccccceEEEecccccc-----cccccccc---ccchhhHHHHHHHHHHHHhhchhhccCCC------eEEEEEEecCCcc
Confidence            7889999998875420     00000000   01111113355678888887666554333      3888899887666


Q ss_pred             CCCCCCCcch-----hhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHS-----YRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~-----Y~asKaa~~~~~~~l-a~~  212 (214)
                      +.........     -....+++.+|+|++ .||
T Consensus      1892 g~~~~~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~ 1925 (2582)
T TIGR02813      1892 GYSNGDADSGTQQVKAELNQAALAGLTKTLNHEW 1925 (2582)
T ss_pred             ccCCccccccccccccchhhhhHHHHHHhHHHHC
Confidence            5311110000     123578999999999 666

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.95  E-value=0.0022  Score=52.82  Aligned_cols=80  Identities=18%  Similarity=0.223  Sum_probs=55.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+++++|+|+++++|.+++..+...|++  |+++++++++.+.+.    ..+..   ...|..+.+..+.+.+...+  .
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~--v~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~--~  234 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGAT--VIATAGSEDKLERAK----ELGAD---YVIDYRKEDFVREVRELTGK--R  234 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHH----HcCCC---eEEecCChHHHHHHHHHhCC--C
Confidence            4789999999999999999999999997  888888775543321    12221   12366665555554443322  3


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++++++|.
T Consensus       235 ~~d~~i~~~g~  245 (342)
T cd08266         235 GVDVVVEHVGA  245 (342)
T ss_pred             CCcEEEECCcH
Confidence            68999999873

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.90  E-value=0.0037  Score=47.05  Aligned_cols=38  Identities=26%  Similarity=0.347  Sum_probs=33.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      .++++|+++|.|++.-.|..+++.|.++|++  |.+..|+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~--V~v~~r~   77 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNAT--VTVCHSK   77 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCE--EEEEECC
Confidence            4689999999999777899999999999996  8888875

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.84  E-value=0.00061  Score=52.76  Aligned_cols=44  Identities=27%  Similarity=0.398  Sum_probs=37.4

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      ..+++||+++|+|.+ .+|..+++.|.+.|++  |++.+++++..+.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~--Vvv~D~~~~~~~~   66 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAK--LIVADINEEAVAR   66 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEcCCHHHHHH
Confidence            457899999999996 8999999999999997  8888888765443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.84  E-value=0.0047  Score=51.77  Aligned_cols=40  Identities=23%  Similarity=0.188  Sum_probs=34.6

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ...|++++|+|.|+ ||+|..++..|++.|.. .|.+++.+.
T Consensus        19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg-~i~lvD~D~   58 (339)
T PRK07688         19 QQKLREKHVLIIGA-GALGTANAEMLVRAGVG-KVTIVDRDY   58 (339)
T ss_pred             HHHhcCCcEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCc
Confidence            35678899999998 79999999999999996 688888764

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.82  E-value=0.0054  Score=48.45  Aligned_cols=39  Identities=23%  Similarity=0.141  Sum_probs=32.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      -.+++++|+|.| .||+|.++++.|++.|.. .+.++|.+.
T Consensus        17 ~~L~~~~VlivG-~GglGs~va~~La~~Gvg-~i~lvD~D~   55 (228)
T cd00757          17 EKLKNARVLVVG-AGGLGSPAAEYLAAAGVG-KLGLVDDDV   55 (228)
T ss_pred             HHHhCCcEEEEC-CCHHHHHHHHHHHHcCCC-EEEEEcCCE
Confidence            457788999998 568999999999999997 788876643

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.81  E-value=0.00086  Score=59.50  Aligned_cols=45  Identities=29%  Similarity=0.313  Sum_probs=37.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccccc
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL   71 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~   71 (214)
                      .++++|+++|+|+ ||+|++++..|++.|++  |++++|+.++.+.+.
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~--V~i~nR~~e~a~~la  419 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGAR--VVIANRTYERAKELA  419 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHH
Confidence            4578999999999 69999999999999996  888999876655443

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.80  E-value=0.0069  Score=50.91  Aligned_cols=79  Identities=18%  Similarity=0.182  Sum_probs=52.5

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH-c
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK-Y  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~  105 (214)
                      +|+.+||.||+||.|...+.-....|+.  .++++++.++.+.    +.+.+..   ...|..+++-    .+++++. .
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~--~v~t~~s~e~~~l----~k~lGAd---~vvdy~~~~~----~e~~kk~~~  223 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAI--KVVTACSKEKLEL----VKKLGAD---EVVDYKDENV----VELIKKYTG  223 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCc--EEEEEcccchHHH----HHHcCCc---EeecCCCHHH----HHHHHhhcC
Confidence            4789999999999999999766667744  6666666665443    3333321   2246666433    3334332 4


Q ss_pred             CCccEEEECcccc
Q 028056          106 GSLNLLINASGIL  118 (214)
Q Consensus       106 ~~vd~lv~nag~~  118 (214)
                      ..+|+++-|.|..
T Consensus       224 ~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  224 KGVDVVLDCVGGS  236 (347)
T ss_pred             CCccEEEECCCCC
Confidence            6899999999874

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.77  E-value=0.0063  Score=48.65  Aligned_cols=39  Identities=21%  Similarity=0.168  Sum_probs=33.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..+++++|+|.|+ ||+|..+++.|+..|.. ++.++|.+.
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg-~i~lvD~D~   66 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVG-TLTLVDFDT   66 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCE
Confidence            5678899999988 89999999999999987 788887653

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.76  E-value=0.0064  Score=41.82  Aligned_cols=37  Identities=30%  Similarity=0.340  Sum_probs=30.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      .+++||.+||.|| |.+|..-++.|++.|++  |.+++..
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~--v~vis~~   39 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAK--VTVISPE   39 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBE--EEEEESS
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEECCc
Confidence            5789999999999 78999999999999997  7777776

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.72  E-value=0.0028  Score=51.69  Aligned_cols=80  Identities=18%  Similarity=0.189  Sum_probs=53.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++++++|+|+++++|..++..+...|.+  |++.++++++.+.+.    +.+.+   ..+|..+.+..+.+.+...  ..
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~--v~~~~~~~~~~~~~~----~~g~~---~~~~~~~~~~~~~~~~~~~--~~  212 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGAR--VIATASSAEGAELVR----QAGAD---AVFNYRAEDLADRILAATA--GQ  212 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHH----HcCCC---EEEeCCCcCHHHHHHHHcC--CC
Confidence            5799999999999999999999999987  888888765544332    12221   1235554444444333221  13


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|.++++++.
T Consensus       213 ~~d~vi~~~~~  223 (325)
T cd08253         213 GVDVIIEVLAN  223 (325)
T ss_pred             ceEEEEECCch
Confidence            68999999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.69  E-value=0.0036  Score=51.54  Aligned_cols=75  Identities=28%  Similarity=0.437  Sum_probs=48.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+.+++|+|+++++|.++++.+...|.+  |+.++++++..+.+    .+.+.. ..+  |..   ++   .+.+. ...
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~--v~~~~~~~~~~~~~----~~~~~~-~~~--~~~---~~---~~~~~-~~~  225 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGAR--VIAVTRSPEKLKIL----KELGAD-YVI--DGS---KF---SEDVK-KLG  225 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCe--EEEEeCCHHHHHHH----HHcCCc-EEE--ecH---HH---HHHHH-hcc
Confidence            4689999999999999999999999997  88888776543332    222221 111  221   12   22222 223


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++++++|.
T Consensus       226 ~~d~v~~~~g~  236 (332)
T cd08259         226 GADVVIELVGS  236 (332)
T ss_pred             CCCEEEECCCh
Confidence            78999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.63  E-value=0.0043  Score=50.79  Aligned_cols=41  Identities=17%  Similarity=0.275  Sum_probs=35.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~   67 (214)
                      .+++|++++|+|. |++|..+++.|...|++  |.+.+|++++.
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~--V~v~~R~~~~~  187 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGAR--VFVGARSSADL  187 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCE--EEEEeCCHHHH
Confidence            4788999999999 66999999999999986  99999987543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.61  E-value=0.039  Score=45.84  Aligned_cols=119  Identities=13%  Similarity=0.135  Sum_probs=70.1

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcC--CCceeEEEecCCCHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRF--PERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      -+++++.|+|+ |.+|..++..++..|.-..+++.+++++.++. ..++....  ..++... .  .+.++         
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~---------   70 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD---------   70 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH---------
Confidence            35679999998 99999999999998874359999998877554 22222211  1122222 1  12121         


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                        +..-|++|..+|...        .+-  .+..+   .+    .....+.+.+++.+.+....     +.+++++...
T Consensus        71 --~~~adivIitag~~~--------k~g--~~R~d---ll----~~N~~i~~~i~~~i~~~~~~-----~~vivvsNP~  125 (315)
T PRK00066         71 --CKDADLVVITAGAPQ--------KPG--ETRLD---LV----EKNLKIFKSIVGEVMASGFD-----GIFLVASNPV  125 (315)
T ss_pred             --hCCCCEEEEecCCCC--------CCC--CCHHH---HH----HHHHHHHHHHHHHHHHhCCC-----eEEEEccCcH
Confidence              137899999999753        111  11111   12    23344555556666654432     3777777543

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.60  E-value=0.0055  Score=49.84  Aligned_cols=80  Identities=15%  Similarity=0.240  Sum_probs=52.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++++++|+|+++++|..++..+...|++  |++++++++..+.+.+    .+..   ...|..+.+...++.+.. . .+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~--v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~-~-~~  207 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGAR--VIATAGSEEKLEACRA----LGAD---VAINYRTEDFAEEVKEAT-G-GR  207 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHH----cCCC---EEEeCCchhHHHHHHHHh-C-CC
Confidence            5789999999999999999999999997  8888887654433321    2221   123444333333332222 1 13


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|.+++++|.
T Consensus       208 ~~d~vi~~~g~  218 (323)
T cd05276         208 GVDVILDMVGG  218 (323)
T ss_pred             CeEEEEECCch
Confidence            68999999874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.60  E-value=0.0078  Score=47.06  Aligned_cols=39  Identities=21%  Similarity=0.119  Sum_probs=33.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..+++++|+|.|+ ||+|..+++.|++.|.. .+.+.|.+.
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg-~i~lvD~D~   62 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVG-NLKLVDFDV   62 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence            4578889999995 79999999999999997 788888763

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.59  E-value=0.0094  Score=50.72  Aligned_cols=37  Identities=19%  Similarity=0.116  Sum_probs=32.1

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      .+++++|+|.|+ ||+|..++..|++.|.. .+.+++++
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg-~i~lvD~d  168 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVG-TLGIVDHD  168 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence            467888999855 79999999999999997 78888886

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.56  E-value=0.0036  Score=40.17  Aligned_cols=28  Identities=36%  Similarity=0.465  Sum_probs=19.9

Q ss_pred             ccC-cEEEEecCCCchhHH--HHHHHHhcCCC
Q 028056           26 WKG-GVSLVQGASRGIGLE--FAKQLLEKNDK   54 (214)
Q Consensus        26 l~~-k~vlItG~s~giG~~--~a~~l~~~g~~   54 (214)
                      ++| |+|||+|+|+|.|++  ++..| ..|++
T Consensus        36 ~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~   66 (78)
T PF12242_consen   36 INGPKKVLVIGASTGYGLASRIAAAF-GAGAD   66 (78)
T ss_dssp             -TS-SEEEEES-SSHHHHHHHHHHHH-CC--E
T ss_pred             CCCCceEEEEecCCcccHHHHHHHHh-cCCCC
Confidence            355 899999999999999  66666 66666

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.56  E-value=0.021  Score=40.62  Aligned_cols=85  Identities=21%  Similarity=0.248  Sum_probs=54.6

Q ss_pred             EEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCCCc--ccccc-------------hhhcCCCceeEEEecCCCHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGA--TGLLD-------------LKNRFPERLDVLQLDLTVEST   93 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~-~g~~~~vi~~~r~~~~~--~~~~~-------------~~~~~~~~~~~~~~Dl~~~~~   93 (214)
                      .|+|.|.+|.+|+.+++.+.+ .+.. .+...+++++..  +.+-+             .+.+.-.... +..|+|.++.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~-lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~D-VvIDfT~p~~   79 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFE-LVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEAD-VVIDFTNPDA   79 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEE-EEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-S-EEEEES-HHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcE-EEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCC-EEEEcCChHH
Confidence            589999999999999999998 5665 456666766211  01110             0111111111 4569999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECcccc
Q 028056           94 IEASAKSIKEKYGSLNLLINASGIL  118 (214)
Q Consensus        94 v~~~~~~~~~~~~~vd~lv~nag~~  118 (214)
                      +...++.+.+.  .+.+++-..|..
T Consensus        80 ~~~~~~~~~~~--g~~~ViGTTG~~  102 (124)
T PF01113_consen   80 VYDNLEYALKH--GVPLVIGTTGFS  102 (124)
T ss_dssp             HHHHHHHHHHH--T-EEEEE-SSSH
T ss_pred             hHHHHHHHHhC--CCCEEEECCCCC
Confidence            99999988887  778888888754

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.55  E-value=0.016  Score=51.05  Aligned_cols=85  Identities=20%  Similarity=0.160  Sum_probs=56.2

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCC-------------CHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-------------VES   92 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-------------~~~   92 (214)
                      ..+.+++|.|+ |.+|...+..+...|+.  |++++++.++++.+++    .+.  .++..|..             +.+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~--V~v~d~~~~rle~a~~----lGa--~~v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAI--VRAFDTRPEVKEQVQS----MGA--EFLELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH----cCC--eEEeccccccccccccceeecCHH
Confidence            34679999996 79999999999999997  8888888765443332    122  23333321             123


Q ss_pred             HHHHHHHHHHHHcCCccEEEECccccC
Q 028056           93 TIEASAKSIKEKYGSLNLLINASGILS  119 (214)
Q Consensus        93 ~v~~~~~~~~~~~~~vd~lv~nag~~~  119 (214)
                      ..+...+.+.++....|++|+++-+.+
T Consensus       233 ~~~~~~~~~~e~~~~~DIVI~TalipG  259 (511)
T TIGR00561       233 FIAAEMELFAAQAKEVDIIITTALIPG  259 (511)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECcccCC
Confidence            334444445555678999999995543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.51  E-value=0.012  Score=49.73  Aligned_cols=39  Identities=15%  Similarity=0.032  Sum_probs=34.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..+++++|+|.|+ ||+|..+++.|+..|.. .+.++|.+.
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg-~i~lvD~D~   62 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVG-HITIIDDDT   62 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence            5578899999988 79999999999999997 788888764

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.50  E-value=0.0039  Score=54.67  Aligned_cols=44  Identities=18%  Similarity=0.219  Sum_probs=36.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~   70 (214)
                      .++++++++|+|+ ||+|++++..|++.|++  |++.+|+.++.+.+
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~--V~i~~R~~~~~~~l  371 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAE--LLIFNRTKAHAEAL  371 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH
Confidence            3567899999996 79999999999999996  88888887654443

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.49  E-value=0.0062  Score=50.72  Aligned_cols=42  Identities=21%  Similarity=0.192  Sum_probs=34.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~   70 (214)
                      .|.+++|+|++|++|..++......|++  |+.+++++++.+.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~--Vi~~~~~~~~~~~~  192 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCY--VVGSAGSDEKVDLL  192 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHH
Confidence            4789999999999999998877778886  88888877654433

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.45  E-value=0.063  Score=44.45  Aligned_cols=35  Identities=20%  Similarity=0.099  Sum_probs=30.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ++.|+|++|.+|..++..++..|....|+++++++
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            68999999999999999999998654589999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.43  E-value=0.068  Score=44.33  Aligned_cols=121  Identities=16%  Similarity=0.086  Sum_probs=69.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +|.|+|++|.+|.++|..++..+.-..++++|+++ ...+..++.... .......+.-.+  +       ..+.+..-|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~g~a~DL~~~~-~~~~i~~~~~~~--~-------~~~~~~daD   69 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AAGVAADLSHIP-TAASVKGFSGEE--G-------LENALKGAD   69 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-CcEEEchhhcCC-cCceEEEecCCC--c-------hHHHcCCCC
Confidence            37899999999999999999888633599999887 222233322211 111111111011  1       112234789


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      ++|..+|...        .+-+  +   -.+.+..|+.    +.+.+.+.+.+....     +.++++|.....
T Consensus        70 ivvitaG~~~--------~~g~--~---R~dll~~N~~----I~~~i~~~i~~~~p~-----~iiivvsNPvDv  121 (312)
T TIGR01772        70 VVVIPAGVPR--------KPGM--T---RDDLFNVNAG----IVKDLVAAVAESCPK-----AMILVITNPVNS  121 (312)
T ss_pred             EEEEeCCCCC--------CCCc--c---HHHHHHHhHH----HHHHHHHHHHHhCCC-----eEEEEecCchhh
Confidence            9999999753        1111  1   1222444444    666666666655433     478888877653

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK14968 putative methyltransferase; Provisional

Probab=96.43  E-value=0.019  Score=43.36  Aligned_cols=77  Identities=21%  Similarity=0.213  Sum_probs=49.4

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCc---eeEEEecCCCHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPER---LDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|-.|++.|.   ++..+++.+.+  |+.++++++..+.+.+.....+.+   +.++.+|+.+.         +.
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~--v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~   87 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKK--VVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FR   87 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcce--EEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------cc
Confidence            357788888876555   34444555665  999999887665554444333322   77888887442         11


Q ss_pred             HHcCCccEEEECcccc
Q 028056          103 EKYGSLNLLINASGIL  118 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~  118 (214)
                      +  ..+|.++.|..+.
T Consensus        88 ~--~~~d~vi~n~p~~  101 (188)
T PRK14968         88 G--DKFDVILFNPPYL  101 (188)
T ss_pred             c--cCceEEEECCCcC
Confidence            1  2689999998765

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.42  E-value=0.017  Score=44.76  Aligned_cols=38  Identities=18%  Similarity=0.146  Sum_probs=33.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      -.|+.++|+|.|+ ||+|..+|..|++.|.. ++++.|.+
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg-~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIG-KLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCC-EEEEECCC
Confidence            5578899999998 68999999999999996 69998887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.40  E-value=0.0079  Score=49.81  Aligned_cols=74  Identities=23%  Similarity=0.201  Sum_probs=50.7

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +.+++++|.|+ |.+|..+++.+...|.. .|++++|++++.+.+.+.   .+.  ..+     +.+++.+.+       
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~-~V~v~~r~~~ra~~la~~---~g~--~~~-----~~~~~~~~l-------  236 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVA-EITIANRTYERAEELAKE---LGG--NAV-----PLDELLELL-------  236 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHH---cCC--eEE-----eHHHHHHHH-------
Confidence            67899999987 99999999999988876 588999987664443332   222  111     122232222       


Q ss_pred             CCccEEEECcccc
Q 028056          106 GSLNLLINASGIL  118 (214)
Q Consensus       106 ~~vd~lv~nag~~  118 (214)
                      ...|++|.+.+..
T Consensus       237 ~~aDvVi~at~~~  249 (311)
T cd05213         237 NEADVVISATGAP  249 (311)
T ss_pred             hcCCEEEECCCCC
Confidence            3579999999854

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.40  E-value=0.012  Score=42.93  Aligned_cols=76  Identities=16%  Similarity=0.198  Sum_probs=50.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc-cchhh--cCC-CceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKN--RFP-ERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~-~~~~~--~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .+.|+|++|.+|.++|..+...+.-..+++.+++++.++.. .++..  ... .++....   .+.+++           
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~-----------   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEAL-----------   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccccc-----------
Confidence            57899999999999999999998755699999987654432 22111  111 1222222   333333           


Q ss_pred             CCccEEEECccccC
Q 028056          106 GSLNLLINASGILS  119 (214)
Q Consensus       106 ~~vd~lv~nag~~~  119 (214)
                      ..-|++|..+|...
T Consensus        68 ~~aDivvitag~~~   81 (141)
T PF00056_consen   68 KDADIVVITAGVPR   81 (141)
T ss_dssp             TTESEEEETTSTSS
T ss_pred             ccccEEEEeccccc
Confidence            36899999999753

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.36  E-value=0.0083  Score=51.86  Aligned_cols=43  Identities=30%  Similarity=0.300  Sum_probs=36.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      ++++++++|.|+ |.+|..+++.|...|+. .|++++|+.++.+.
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~-~V~v~~r~~~ra~~  221 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVR-KITVANRTLERAEE  221 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCC-eEEEEeCCHHHHHH
Confidence            478899999987 99999999999999985 58999998765443

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.36  E-value=0.014  Score=47.12  Aligned_cols=80  Identities=14%  Similarity=0.091  Sum_probs=49.2

Q ss_pred             EEEecCCCchhHHHHHHHHhcC--CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           31 SLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g--~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      +.|.|++|.+|..++..|+..|  ....|++.|.++++++.....++......  ....++...+..+.+       ...
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~~~-------~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYEAF-------KDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHHHh-------CCC
Confidence            4689998899999999999988  32259999999877665433332221111  011111111111112       368


Q ss_pred             cEEEECccccC
Q 028056          109 NLLINASGILS  119 (214)
Q Consensus       109 d~lv~nag~~~  119 (214)
                      |++|..+|...
T Consensus        72 DiVv~t~~~~~   82 (263)
T cd00650          72 DVVIITAGVGR   82 (263)
T ss_pred             CEEEECCCCCC
Confidence            99999998764

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.34  E-value=0.038  Score=48.81  Aligned_cols=85  Identities=22%  Similarity=0.166  Sum_probs=54.1

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCH-------------H
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-------------S   92 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-------------~   92 (214)
                      ..+.+|+|+|++ .+|...+......|++  |+++++++++++..++    .+.+  ++..|..+.             +
T Consensus       163 ~pg~kVlViGaG-~iGL~Ai~~Ak~lGA~--V~a~D~~~~rle~aes----lGA~--~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        163 VPPAKVLVIGAG-VAGLAAIGAAGSLGAI--VRAFDTRPEVAEQVES----MGAE--FLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             cCCCEEEEECCc-HHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH----cCCe--EEEeccccccccccchhhhcchh
Confidence            457899999875 7999999888899996  9999998876554433    2333  222232221             1


Q ss_pred             HHHHHHHHHHHHcCCccEEEECccccC
Q 028056           93 TIEASAKSIKEKYGSLNLLINASGILS  119 (214)
Q Consensus        93 ~v~~~~~~~~~~~~~vd~lv~nag~~~  119 (214)
                      ..++..+.+.+.....|++|.+++...
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCc
Confidence            111112222333357999999999753

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.32  E-value=0.013  Score=48.91  Aligned_cols=77  Identities=18%  Similarity=0.294  Sum_probs=47.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-C
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-G  106 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~  106 (214)
                      |.++||+||+||+|...+......|+.  +++...+.++.+    .+.+.+....   .|..+.+    +.+++++.. +
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~--~v~~~~s~~k~~----~~~~lGAd~v---i~y~~~~----~~~~v~~~t~g  209 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGAT--VVAVVSSSEKLE----LLKELGADHV---INYREED----FVEQVRELTGG  209 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCc--EEEEecCHHHHH----HHHhcCCCEE---EcCCccc----HHHHHHHHcCC
Confidence            899999999999999999777777875  555544443322    3333333222   1233222    334443332 2


Q ss_pred             -CccEEEECccc
Q 028056          107 -SLNLLINASGI  117 (214)
Q Consensus       107 -~vd~lv~nag~  117 (214)
                       .+|+++...|.
T Consensus       210 ~gvDvv~D~vG~  221 (326)
T COG0604         210 KGVDVVLDTVGG  221 (326)
T ss_pred             CCceEEEECCCH
Confidence             58999998884

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.30  E-value=0.0079  Score=49.76  Aligned_cols=79  Identities=14%  Similarity=0.198  Sum_probs=48.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+++|+|++|++|..++......|++  |+.+++++++.+.+.    +.+... ++  |..+.+...+.+.+...  +
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~--Vi~~~~s~~~~~~~~----~lGa~~-vi--~~~~~~~~~~~~~~~~~--~  206 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCK--VVGAAGSDEKVAYLK----KLGFDV-AF--NYKTVKSLEETLKKASP--D  206 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHH----HcCCCE-EE--eccccccHHHHHHHhCC--C
Confidence            4789999999999999998777777886  888887765544332    223211 12  22222223333333321  3


Q ss_pred             CccEEEECcc
Q 028056          107 SLNLLINASG  116 (214)
Q Consensus       107 ~vd~lv~nag  116 (214)
                      .+|+++.+.|
T Consensus       207 gvdvv~d~~G  216 (325)
T TIGR02825       207 GYDCYFDNVG  216 (325)
T ss_pred             CeEEEEECCC
Confidence            5788888776

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PLN00203 glutamyl-tRNA reductase

Probab=96.30  E-value=0.0079  Score=53.21  Aligned_cols=46  Identities=22%  Similarity=0.272  Sum_probs=38.8

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccc
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD   72 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~   72 (214)
                      ++.+++++|.|+ |.+|..+++.|...|.. .|++++|+.++.+.+.+
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~-~V~V~nRs~era~~La~  308 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCT-KMVVVNRSEERVAALRE  308 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHH
Confidence            377899999999 99999999999999985 59999999877555433

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.26  E-value=0.014  Score=45.22  Aligned_cols=38  Identities=11%  Similarity=0.148  Sum_probs=32.7

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      ..+++||.++|.|| |.+|...++.|.+.|++  |.+++++
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~--V~VIs~~   42 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAH--IVVISPE   42 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCe--EEEEcCC
Confidence            36789999999999 78999999999999987  7776654

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.26  E-value=0.021  Score=41.15  Aligned_cols=35  Identities=26%  Similarity=0.282  Sum_probs=28.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      +++++|.|++ ++|..+++.|++.|.. .+.++|.+.
T Consensus         2 ~~~v~iiG~G-~vGs~va~~L~~~Gv~-~i~lvD~d~   36 (135)
T PF00899_consen    2 NKRVLIIGAG-GVGSEVAKNLARSGVG-KITLVDDDI   36 (135)
T ss_dssp             T-EEEEESTS-HHHHHHHHHHHHHTTS-EEEEEESSB
T ss_pred             CCEEEEECcC-HHHHHHHHHHHHhCCC-ceeecCCcc
Confidence            5678888765 8999999999999997 788888754

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.23  E-value=0.014  Score=48.82  Aligned_cols=77  Identities=13%  Similarity=0.202  Sum_probs=49.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+++++|+|+ |++|...+.-+...|++ .|+++++++++++.+.+    .+... .  .|..+. ++.+    +.+..+
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~-~Vi~~~~~~~~~~~a~~----lGa~~-v--i~~~~~-~~~~----~~~~~g  234 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAA-EIVCADVSPRSLSLARE----MGADK-L--VNPQND-DLDH----YKAEKG  234 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCc-EEEEEeCCHHHHHHHHH----cCCcE-E--ecCCcc-cHHH----HhccCC
Confidence            5889999986 89999999777778885 58888888776553332    23221 1  233332 2222    222224


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|.+.|.
T Consensus       235 ~~D~vid~~G~  245 (343)
T PRK09880        235 YFDVSFEVSGH  245 (343)
T ss_pred             CCCEEEECCCC
Confidence            68999988874

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.23  E-value=0.01  Score=49.42  Aligned_cols=79  Identities=10%  Similarity=0.095  Sum_probs=47.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      .+++|+|++|++|..++......|+. .|+.+++++++.+.+.+.   .+... ++  |..+ +++.+.+.++..  ..+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~-~Vi~~~~s~~~~~~~~~~---lGa~~-vi--~~~~-~~~~~~i~~~~~--~gv  225 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCS-RVVGICGSDEKCQLLKSE---LGFDA-AI--NYKT-DNVAERLRELCP--EGV  225 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHHHHHh---cCCcE-EE--ECCC-CCHHHHHHHHCC--CCc
Confidence            79999999999999998776777883 388888776554433221   23221 22  2222 122222333321  358


Q ss_pred             cEEEECccc
Q 028056          109 NLLINASGI  117 (214)
Q Consensus       109 d~lv~nag~  117 (214)
                      |+++.+.|.
T Consensus       226 d~vid~~g~  234 (345)
T cd08293         226 DVYFDNVGG  234 (345)
T ss_pred             eEEEECCCc
Confidence            888887763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.20  E-value=0.13  Score=42.66  Aligned_cols=120  Identities=16%  Similarity=0.126  Sum_probs=66.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ++.|+|++|.+|.++|..++..+.-..+++++.+  .++. ..++.... .......+. .+ +++       .+.+...
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~-~~~~i~~~~-~~-~~~-------y~~~~da   69 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN-TPAKVTGYL-GP-EEL-------KKALKGA   69 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC-CcceEEEec-CC-Cch-------HHhcCCC
Confidence            5789999999999999999988864369999988  3222 22222211 111111110 10 011       1122478


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      |++|..||...        .+-  .+   -...++.|.    .+.+.+.+.+.+....     +.++++|.....
T Consensus        70 DivvitaG~~~--------k~g--~t---R~dll~~N~----~i~~~i~~~i~~~~p~-----a~vivvtNPvDv  122 (310)
T cd01337          70 DVVVIPAGVPR--------KPG--MT---RDDLFNINA----GIVRDLATAVAKACPK-----ALILIISNPVNS  122 (310)
T ss_pred             CEEEEeCCCCC--------CCC--CC---HHHHHHHHH----HHHHHHHHHHHHhCCC-----eEEEEccCchhh
Confidence            99999999753        111  11   122234443    4455555555554332     488888876633

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.18  E-value=0.012  Score=55.85  Aligned_cols=79  Identities=18%  Similarity=0.154  Sum_probs=57.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCC------------cEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDK------------GCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTI   94 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~------------~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   94 (214)
                      +.|.|+|.|+ |.+|...++.|++....            ..|.+.+++.+.++.+.+.   . .++..++.|++|.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~---~-~~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG---I-ENAEAVQLDVSDSESL  642 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh---c-CCCceEEeecCCHHHH
Confidence            4689999997 89999999999876431            1367777776554433322   1 2567899999999887


Q ss_pred             HHHHHHHHHHcCCccEEEECccc
Q 028056           95 EASAKSIKEKYGSLNLLINASGI  117 (214)
Q Consensus        95 ~~~~~~~~~~~~~vd~lv~nag~  117 (214)
                      .++++       .+|+||++...
T Consensus       643 ~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        643 LKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHhhc-------CCCEEEECCCc
Confidence            66655       58999999865

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.16  E-value=0.01  Score=49.81  Aligned_cols=40  Identities=18%  Similarity=0.189  Sum_probs=32.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      .|.+++|+|++|++|..++......|++  |+.+++++++.+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~--Vi~~~~~~~k~~  197 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCY--VVGSAGSSQKVD  197 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCE--EEEEcCCHHHHH
Confidence            4789999999999999998777778886  888777665543

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.05  E-value=0.022  Score=43.12  Aligned_cols=32  Identities=19%  Similarity=0.115  Sum_probs=27.7

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      |+|.|+ ||+|..+++.|++.|.. ++.+.|.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg-~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVG-NLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence            677775 79999999999999997 788888765

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.03  E-value=0.04  Score=44.73  Aligned_cols=88  Identities=16%  Similarity=0.175  Sum_probs=57.3

Q ss_pred             cEEEEecCCCchhHHH--HHHHHhcCCCcEE-EEeecCCCCccc----------ccchhhcCCCceeEEEecCCCHHHHH
Q 028056           29 GVSLVQGASRGIGLEF--AKQLLEKNDKGCV-IATCRNPNGATG----------LLDLKNRFPERLDVLQLDLTVESTIE   95 (214)
Q Consensus        29 k~vlItG~s~giG~~~--a~~l~~~g~~~~v-i~~~r~~~~~~~----------~~~~~~~~~~~~~~~~~Dl~~~~~v~   95 (214)
                      |.|||.|+|+|.|.+.  +..|- .|++ ++ +..-|.....+.          ..+.....|--..-+..|.-+.+.-+
T Consensus        42 KkVLviGaSsGyGLa~RIsaaFG-~gAd-TiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~  119 (398)
T COG3007          42 KKVLVIGASSGYGLAARISAAFG-PGAD-TIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             ceEEEEecCCcccHHHHHHHHhC-CCCc-eeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence            8999999999988764  44444 4555 34 333332221110          12222223334556778998888888


Q ss_pred             HHHHHHHHHcCCccEEEECcccc
Q 028056           96 ASAKSIKEKYGSLNLLINASGIL  118 (214)
Q Consensus        96 ~~~~~~~~~~~~vd~lv~nag~~  118 (214)
                      ..++.+++.++.+|.+|+.-+..
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAsp  142 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHhhccccEEEEeccCc
Confidence            99999999999999998876543

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.01  E-value=0.016  Score=49.55  Aligned_cols=76  Identities=22%  Similarity=0.216  Sum_probs=54.0

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +++++++||.|++ -+|..+|++|+++|.. .|++++|+.++++++.+.+   +.       +...       ++++.+.
T Consensus       175 ~L~~~~vlvIGAG-em~~lva~~L~~~g~~-~i~IaNRT~erA~~La~~~---~~-------~~~~-------l~el~~~  235 (414)
T COG0373         175 SLKDKKVLVIGAG-EMGELVAKHLAEKGVK-KITIANRTLERAEELAKKL---GA-------EAVA-------LEELLEA  235 (414)
T ss_pred             ccccCeEEEEccc-HHHHHHHHHHHhCCCC-EEEEEcCCHHHHHHHHHHh---CC-------eeec-------HHHHHHh
Confidence            3899999999986 6999999999999987 7999999988766544433   21       1111       2233333


Q ss_pred             cCCccEEEECccccC
Q 028056          105 YGSLNLLINASGILS  119 (214)
Q Consensus       105 ~~~vd~lv~nag~~~  119 (214)
                      +...|++|.+.+...
T Consensus       236 l~~~DvVissTsa~~  250 (414)
T COG0373         236 LAEADVVISSTSAPH  250 (414)
T ss_pred             hhhCCEEEEecCCCc
Confidence            357799988887643

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.01  E-value=0.051  Score=41.99  Aligned_cols=39  Identities=23%  Similarity=0.268  Sum_probs=32.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..+++.+|+|.|+++ +|.++++.|+..|.. .+.++|.+.
T Consensus        15 ~~L~~s~VlviG~gg-lGsevak~L~~~GVg-~i~lvD~d~   53 (198)
T cd01485          15 NKLRSAKVLIIGAGA-LGAEIAKNLVLAGID-SITIVDHRL   53 (198)
T ss_pred             HHHhhCcEEEECCCH-HHHHHHHHHHHcCCC-EEEEEECCc
Confidence            456788999997775 999999999999998 788887654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.98  E-value=0.016  Score=47.29  Aligned_cols=37  Identities=27%  Similarity=0.318  Sum_probs=33.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR   62 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r   62 (214)
                      .+++||.++|.|.++-.|+.++..|.++|+.  |.++.|
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gat--Vtv~~~  191 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANAT--VTICHS  191 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCE--EEEEeC
Confidence            5689999999999999999999999999996  777765

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.95  E-value=0.018  Score=47.41  Aligned_cols=40  Identities=23%  Similarity=0.309  Sum_probs=34.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      ..+.+++++|.|. |++|+.++..|...|++  |.+.+|++++
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~--V~v~~r~~~~  187 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGAN--VTVGARKSAH  187 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEECCHHH
Confidence            4567999999997 67999999999999986  9999998654

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.93  E-value=0.027  Score=47.01  Aligned_cols=43  Identities=23%  Similarity=0.179  Sum_probs=34.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD   72 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~   72 (214)
                      .|++++|+|.+ |+|...+.-....|++  |+++++++++++.+.+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~--Via~~~~~~K~e~a~~  208 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAE--VIAITRSEEKLELAKK  208 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCe--EEEEeCChHHHHHHHH
Confidence            38999999999 9998888655558976  9999999987665443

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.93  E-value=0.021  Score=49.32  Aligned_cols=43  Identities=30%  Similarity=0.331  Sum_probs=36.1

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      ++.+++++|.|+ |.+|..+++.|...|.. .|++++|+.++.+.
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~-~V~v~~rs~~ra~~  219 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVG-KILIANRTYERAED  219 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHH
Confidence            477899999997 99999999999999954 59999998765443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK05442 malate dehydrogenase; Provisional

Probab=95.92  E-value=0.043  Score=45.77  Aligned_cols=117  Identities=10%  Similarity=0.041  Sum_probs=66.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCc-----EEEEeecCCCC--ccc-ccchhhcC---CCceeEEEecCCCHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNPNG--ATG-LLDLKNRF---PERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~-----~vi~~~r~~~~--~~~-~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      +.+.|+|++|.+|..++..++..|.-.     .+++.|.++..  ++. ..++....   ..++. +..  .+       
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-i~~--~~-------   74 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-ITD--DP-------   74 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-Eec--Ch-------
Confidence            478999999999999999999877643     48999986532  222 22221111   01111 110  11       


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEE
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVAN  176 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~  176 (214)
                          .+.+..-|++|..||...        .+-  .+..+   .+    .....+.+.+.+.+.+.. ..     +.+++
T Consensus        75 ----y~~~~daDiVVitaG~~~--------k~g--~tR~d---ll----~~Na~i~~~i~~~i~~~~~~~-----~iiiv  128 (326)
T PRK05442         75 ----NVAFKDADVALLVGARPR--------GPG--MERKD---LL----EANGAIFTAQGKALNEVAARD-----VKVLV  128 (326)
T ss_pred             ----HHHhCCCCEEEEeCCCCC--------CCC--CcHHH---HH----HHHHHHHHHHHHHHHHhCCCC-----eEEEE
Confidence                122347899999999753        111  12221   22    344556777777777632 22     37777


Q ss_pred             eecCc
Q 028056          177 LSARV  181 (214)
Q Consensus       177 iss~~  181 (214)
                      +|...
T Consensus       129 vsNPv  133 (326)
T PRK05442        129 VGNPA  133 (326)
T ss_pred             eCCch
Confidence            77543

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.91  E-value=0.02  Score=45.45  Aligned_cols=78  Identities=26%  Similarity=0.245  Sum_probs=49.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++.+++|+|+++ +|..++..+...|.+  |+++++++++.+.+.    +.+.. ..  .|..+.+....+.   ....+
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~--v~~~~~~~~~~~~~~----~~g~~-~~--~~~~~~~~~~~~~---~~~~~  200 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGAR--VIVTDRSDEKLELAK----ELGAD-HV--IDYKEEDLEEELR---LTGGG  200 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCe--EEEEcCCHHHHHHHH----HhCCc-ee--ccCCcCCHHHHHH---HhcCC
Confidence            578999999998 999999888888876  888888765433322    22211 11  2333333333322   22235


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|+++++++.
T Consensus       201 ~~d~vi~~~~~  211 (271)
T cd05188         201 GADVVIDAVGG  211 (271)
T ss_pred             CCCEEEECCCC
Confidence            79999999873

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.86  E-value=0.042  Score=39.93  Aligned_cols=33  Identities=21%  Similarity=0.191  Sum_probs=28.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      +++|.|+ ||+|.++++.|++.|.. .+.+.+.+.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~-~i~ivD~d~   33 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVG-KITLIDFDT   33 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCC-EEEEEcCCC
Confidence            3678886 89999999999999996 788887764

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.81  E-value=0.18  Score=42.09  Aligned_cols=35  Identities=20%  Similarity=0.156  Sum_probs=30.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCc-----EEEEeecCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKG-----CVIATCRNP   64 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~-----~vi~~~r~~   64 (214)
                      .+.|+|++|.+|.+++..++..|.-.     .+++.+.++
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   44 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP   44 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence            68899999999999999999888643     489999865

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK04148 hypothetical protein; Provisional

Probab=95.80  E-value=0.0095  Score=42.96  Aligned_cols=56  Identities=21%  Similarity=0.113  Sum_probs=43.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVES   92 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   92 (214)
                      +++.+++.|.+  .|.++|..|.+.|.+  |+.++.++...+.+.+      ..+.++.+|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~--ViaIDi~~~aV~~a~~------~~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFD--VIVIDINEKAVEKAKK------LGLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCE--EEEEECCHHHHHHHHH------hCCeEEECcCCCCC
Confidence            45789999988  888899999999997  9999999875443322      23667888888754

>PRK08223 hypothetical protein; Validated

Probab=95.79  E-value=0.029  Score=45.79  Aligned_cols=40  Identities=10%  Similarity=-0.011  Sum_probs=34.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      -.+++.+|+|.|++ |+|..++..|+..|.. ++.++|.+.-
T Consensus        23 ~kL~~s~VlIvG~G-GLGs~va~~LA~aGVG-~i~lvD~D~V   62 (287)
T PRK08223         23 QRLRNSRVAIAGLG-GVGGIHLLTLARLGIG-KFTIADFDVF   62 (287)
T ss_pred             HHHhcCCEEEECCC-HHHHHHHHHHHHhCCC-eEEEEeCCCc
Confidence            56788999999875 8999999999999997 7888887653

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.78  E-value=0.14  Score=44.55  Aligned_cols=116  Identities=9%  Similarity=0.033  Sum_probs=70.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-------CCCcEEEEeecCCCCccc-ccchhhcC---CCceeEEEecCCCHHHHHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEK-------NDKGCVIATCRNPNGATG-LLDLKNRF---PERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~-------g~~~~vi~~~r~~~~~~~-~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      .|.|+|++|.+|.+++..++..       +....+++.+++++.++. ..++....   ..++ .+..  .+.++     
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v-~i~~--~~ye~-----  173 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREV-SIGI--DPYEV-----  173 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCce-EEec--CCHHH-----
Confidence            6789999999999999999988       553358999999988664 22222211   1111 1111  12222     


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhc-CCCCCCCCceEEEEe
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANL  177 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~~~~~~~iv~i  177 (214)
                            +..-|++|..+|...        .+-  .+..   +.+    ....-+.+.+.+.+.+ .+..     +.+|++
T Consensus       174 ------~kdaDiVVitAG~pr--------kpG--~tR~---dLl----~~N~~I~k~i~~~I~~~a~p~-----~ivIVV  225 (444)
T PLN00112        174 ------FQDAEWALLIGAKPR--------GPG--MERA---DLL----DINGQIFAEQGKALNEVASRN-----VKVIVV  225 (444)
T ss_pred             ------hCcCCEEEECCCCCC--------CCC--CCHH---HHH----HHHHHHHHHHHHHHHHhcCCC-----eEEEEc
Confidence                  237899999999753        211  1111   123    3345566777777776 3333     377777


Q ss_pred             ecCc
Q 028056          178 SARV  181 (214)
Q Consensus       178 ss~~  181 (214)
                      +..+
T Consensus       226 sNPv  229 (444)
T PLN00112        226 GNPC  229 (444)
T ss_pred             CCcH
Confidence            7644

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.76  E-value=0.052  Score=35.89  Aligned_cols=37  Identities=32%  Similarity=0.379  Sum_probs=31.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR   62 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r   62 (214)
                      .++++++++|.|. |..|..++..+.+.+.. .|.+++|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~-~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGK-KVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcC
Confidence            5578999999999 99999999999998654 4777766

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.75  E-value=0.022  Score=49.49  Aligned_cols=58  Identities=16%  Similarity=0.190  Sum_probs=40.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIE   95 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~   95 (214)
                      .++|.|+ |.+|..+++.|.+.|..  |++++++++..+.+.+     ...+.++.+|.++...++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~--v~vid~~~~~~~~~~~-----~~~~~~~~gd~~~~~~l~   59 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENND--VTVIDTDEERLRRLQD-----RLDVRTVVGNGSSPDVLR   59 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCc--EEEEECCHHHHHHHHh-----hcCEEEEEeCCCCHHHHH
Confidence            5788887 89999999999999998  8888988765443322     112445555655544433

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.74  E-value=0.019  Score=41.04  Aligned_cols=88  Identities=17%  Similarity=0.242  Sum_probs=51.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc--------CCCceeEEEecCCCHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--------FPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~--------~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      -++-|.|+ |..|.++++.|.+.|+. .+-+.+|+.++.+++...+..        .-.....+-.-+.|. .+..+.++
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~-v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~   87 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHE-VVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQ   87 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSE-EEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHH
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCe-EEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHH
Confidence            36788888 78999999999999987 345567776554443332211        011233333444444 68888888


Q ss_pred             HHHH--cCCccEEEECccccC
Q 028056          101 IKEK--YGSLNLLINASGILS  119 (214)
Q Consensus       101 ~~~~--~~~vd~lv~nag~~~  119 (214)
                      +...  +.+=.+++|+.|...
T Consensus        88 La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS--
T ss_pred             HHHhccCCCCcEEEECCCCCh
Confidence            8765  444579999999764

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.74  E-value=0.033  Score=43.34  Aligned_cols=39  Identities=21%  Similarity=0.291  Sum_probs=32.2

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..+++||.++|.||+ .+|..-++.|++.|++  |.+++.+.
T Consensus         4 ~l~l~gk~vlVvGgG-~va~rk~~~Ll~~ga~--VtVvsp~~   42 (205)
T TIGR01470         4 FANLEGRAVLVVGGG-DVALRKARLLLKAGAQ--LRVIAEEL   42 (205)
T ss_pred             EEEcCCCeEEEECcC-HHHHHHHHHHHHCCCE--EEEEcCCC
Confidence            356899999999976 6889999999999997  77776543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.73  E-value=0.019  Score=42.85  Aligned_cols=86  Identities=22%  Similarity=0.217  Sum_probs=56.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh-------hcCCCceeEEEecCCCHHHHHHHHHH-
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-------NRFPERLDVLQLDLTVESTIEASAKS-  100 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~Dl~~~~~v~~~~~~-  100 (214)
                      +++-+.|- |-+|..+|+.|++.|++  |.+.+|++++.+++.+.-       .+.-.+...+-.-+.+.+++++++.. 
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~--v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~   78 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYE--VTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGE   78 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTE--EEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCT
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCe--EEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhh
Confidence            46677776 68999999999999997  999999987655432211       11111345666678888889988887 


Q ss_pred             -HHHHcCCccEEEECccc
Q 028056          101 -IKEKYGSLNLLINASGI  117 (214)
Q Consensus       101 -~~~~~~~vd~lv~nag~  117 (214)
                       +.....+=+++|++...
T Consensus        79 ~i~~~l~~g~iiid~sT~   96 (163)
T PF03446_consen   79 NILAGLRPGKIIIDMSTI   96 (163)
T ss_dssp             THGGGS-TTEEEEE-SS-
T ss_pred             HHhhccccceEEEecCCc
Confidence             66655555666666643

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PLN02602 lactate dehydrogenase

Probab=95.72  E-value=0.25  Score=41.71  Aligned_cols=117  Identities=18%  Similarity=0.218  Sum_probs=69.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhc--CCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNR--FPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +.+.|+|+ |.+|.++|..++..+....+++.+.+++.++. ..++...  ..... -+..+ .+.++       +    
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy~~-------~----  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDYAV-------T----  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCHHH-------h----
Confidence            68999996 99999999999988875469999998876543 2222221  11122 22211 12121       1    


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      ..-|++|..||...        .+-  .+..+   .    +....-+.+.+.+.+.+....     +.+++++...
T Consensus       104 ~daDiVVitAG~~~--------k~g--~tR~d---l----l~~N~~I~~~i~~~I~~~~p~-----~ivivvtNPv  157 (350)
T PLN02602        104 AGSDLCIVTAGARQ--------IPG--ESRLN---L----LQRNVALFRKIIPELAKYSPD-----TILLIVSNPV  157 (350)
T ss_pred             CCCCEEEECCCCCC--------CcC--CCHHH---H----HHHHHHHHHHHHHHHHHHCCC-----eEEEEecCch
Confidence            37899999999753        111  11111   1    234455666677776665433     4777777643

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=95.69  E-value=0.028  Score=45.84  Aligned_cols=80  Identities=14%  Similarity=0.232  Sum_probs=49.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++++++|+|+++++|..++..+...|++  |++++++++..+.+    .+.+.+.   ..+..+.+....+.+ ... ..
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~--v~~~~~~~~~~~~~----~~~g~~~---~~~~~~~~~~~~~~~-~~~-~~  207 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGAR--VFTTAGSDEKCAAC----EALGADI---AINYREEDFVEVVKA-ETG-GK  207 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCE--EEEEeCCHHHHHHH----HHcCCcE---EEecCchhHHHHHHH-HcC-CC
Confidence            4789999999999999999988999987  88888776543322    2222211   123233332222222 211 12


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+++|.
T Consensus       208 ~~d~~i~~~~~  218 (325)
T TIGR02824       208 GVDVILDIVGG  218 (325)
T ss_pred             CeEEEEECCch
Confidence            58999998763

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.67  E-value=0.14  Score=42.47  Aligned_cols=118  Identities=15%  Similarity=0.122  Sum_probs=69.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcC--CCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      ..+.|+|+ |.+|..+|..++..|....+++.+.+++.++. ..++....  ........+  +|.++           +
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-----------~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-----------T   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------h
Confidence            47889996 99999999999998875469999998875543 22222111  111111211  12222           1


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ...|++|..||...        .+  ..+..+   .    +....-+.+.+.+.+.+....     +.+++++....
T Consensus        70 ~~adivvitaG~~~--------k~--g~~R~d---l----l~~N~~i~~~~~~~i~~~~p~-----~~vivvsNP~d  124 (312)
T cd05293          70 ANSKVVIVTAGARQ--------NE--GESRLD---L----VQRNVDIFKGIIPKLVKYSPN-----AILLVVSNPVD  124 (312)
T ss_pred             CCCCEEEECCCCCC--------CC--CCCHHH---H----HHHHHHHHHHHHHHHHHhCCC-----cEEEEccChHH
Confidence            37899999999753        11  112211   1    234455666666666665433     47888876543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.66  E-value=0.048  Score=44.56  Aligned_cols=78  Identities=18%  Similarity=0.221  Sum_probs=49.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~-~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .|.|++|++|+|..|..+. ++++ .|++  ||-..-.+++..-+.+.+   +-. ..  .|--.+    ++.+.+.+..
T Consensus       150 ~GetvvVSaAaGaVGsvvg-QiAKlkG~r--VVGiaGg~eK~~~l~~~l---GfD-~~--idyk~~----d~~~~L~~a~  216 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVG-QIAKLKGCR--VVGIAGGAEKCDFLTEEL---GFD-AG--IDYKAE----DFAQALKEAC  216 (340)
T ss_pred             CCCEEEEEecccccchHHH-HHHHhhCCe--EEEecCCHHHHHHHHHhc---CCc-ee--eecCcc----cHHHHHHHHC
Confidence            4899999999999998766 5555 5665  888877776644333322   111 01  133322    3445555554


Q ss_pred             C-CccEEEECccc
Q 028056          106 G-SLNLLINASGI  117 (214)
Q Consensus       106 ~-~vd~lv~nag~  117 (214)
                      | .+|+.+-|.|.
T Consensus       217 P~GIDvyfeNVGg  229 (340)
T COG2130         217 PKGIDVYFENVGG  229 (340)
T ss_pred             CCCeEEEEEcCCc
Confidence            4 59999999985

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.65  E-value=0.031  Score=46.03  Aligned_cols=41  Identities=22%  Similarity=0.225  Sum_probs=33.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      .|.+++|+||+|++|..++......|++  |+.+++++++.+.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~--vi~~~~s~~~~~~  183 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCK--VIGCAGSDDKVAW  183 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHH
Confidence            4789999999999999988777778886  8888877765443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.63  E-value=0.14  Score=44.51  Aligned_cols=79  Identities=16%  Similarity=0.227  Sum_probs=50.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++|+++|+|.+ ++|.++|+.|+++|+.  |.+.+.++... ...+ +.+....+.+...... ..    .+     
T Consensus         1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~--v~~~d~~~~~~-~~~~-l~~~~~gi~~~~g~~~-~~----~~-----   65 (445)
T PRK04308          1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAE--VAAYDAELKPE-RVAQ-IGKMFDGLVFYTGRLK-DA----LD-----   65 (445)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEeCCCCch-hHHH-HhhccCCcEEEeCCCC-HH----HH-----
Confidence            34678999999986 8999999999999997  87777665431 1111 2211123444332221 11    11     


Q ss_pred             HcCCccEEEECccccC
Q 028056          104 KYGSLNLLINASGILS  119 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~  119 (214)
                        ...|.||..+|+..
T Consensus        66 --~~~d~vv~spgi~~   79 (445)
T PRK04308         66 --NGFDILALSPGISE   79 (445)
T ss_pred             --hCCCEEEECCCCCC
Confidence              25799999999863

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.62  E-value=0.066  Score=41.33  Aligned_cols=39  Identities=21%  Similarity=0.279  Sum_probs=32.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..+++++|+|.|+ ||+|.++++.|+..|.. ++.++|.+.
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg-~i~lvD~d~   55 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIG-SLTILDDRT   55 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCC-EEEEEECCc
Confidence            4577889999975 55999999999999998 788887654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.61  E-value=0.045  Score=45.55  Aligned_cols=41  Identities=24%  Similarity=0.053  Sum_probs=33.8

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      .+.+.+.|+|+ |.+|..++..++..|.. .|++++++++.++
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~-~l~L~Di~~~~~~   43 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLG-DVVLYDVIKGVPQ   43 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCC-eEEEEECCCccch
Confidence            35678999997 88999999999998843 4999999887644

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.60  E-value=0.053  Score=44.28  Aligned_cols=38  Identities=29%  Similarity=0.374  Sum_probs=33.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      .+++||.++|.|.+.-+|+.++..|.++|+.  |.++.+.
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gat--Vtv~~s~  191 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNAS--VTILHSR  191 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCe--EEEEeCC
Confidence            4689999999999999999999999999997  7666653

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.58  E-value=0.055  Score=45.98  Aligned_cols=38  Identities=18%  Similarity=0.213  Sum_probs=32.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      ..+++++|+|.|++ |+|..++..|+..|.. .+.+++.+
T Consensus        37 ~~l~~~~VliiG~G-glG~~v~~~La~~Gvg-~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIGAG-GLGCPAMQSLASAGVG-TITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEECCC-HHHHHHHHHHHHcCCC-EEEEEeCC
Confidence            45678899999875 8999999999999987 68888775

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.50  E-value=0.018  Score=40.06  Aligned_cols=71  Identities=24%  Similarity=0.300  Sum_probs=48.4

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNL  110 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~  110 (214)
                      ++|.|.+ .+|..+++.|.+.+.+  |++++++++..+.+.    +  ..+.++.+|.++++.++++-      ..+.+.
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~--vvvid~d~~~~~~~~----~--~~~~~i~gd~~~~~~l~~a~------i~~a~~   65 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGID--VVVIDRDPERVEELR----E--EGVEVIYGDATDPEVLERAG------IEKADA   65 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSE--EEEEESSHHHHHHHH----H--TTSEEEES-TTSHHHHHHTT------GGCESE
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCE--EEEEECCcHHHHHHH----h--cccccccccchhhhHHhhcC------ccccCE
Confidence            5677775 7999999999997655  999998876533322    1  12678899999998876541      125677


Q ss_pred             EEECcc
Q 028056          111 LINASG  116 (214)
Q Consensus       111 lv~nag  116 (214)
                      +|....
T Consensus        66 vv~~~~   71 (116)
T PF02254_consen   66 VVILTD   71 (116)
T ss_dssp             EEEESS
T ss_pred             EEEccC
Confidence            666553

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.48  E-value=0.041  Score=45.55  Aligned_cols=33  Identities=30%  Similarity=0.258  Sum_probs=27.9

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      |+|.|+ ||+|.++++.|+..|.. .+.++|.+.-
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg-~ItIvD~D~V   34 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFG-EIHIIDLDTI   34 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCC-eEEEEcCCCc
Confidence            678876 89999999999999997 7888886553

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14851 hypothetical protein; Provisional

Probab=95.45  E-value=0.045  Score=50.07  Aligned_cols=39  Identities=8%  Similarity=0.010  Sum_probs=33.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      -.+++++|+|.| .||+|..++..|+..|.. .+.++|.+.
T Consensus        39 ~kL~~~~VlIvG-~GGlGs~va~~Lar~GVG-~l~LvD~D~   77 (679)
T PRK14851         39 ERLAEAKVAIPG-MGGVGGVHLITMVRTGIG-RFHIADFDQ   77 (679)
T ss_pred             HHHhcCeEEEEC-cCHHHHHHHHHHHHhCCC-eEEEEcCCE
Confidence            457889999998 569999999999999996 788887654

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.44  E-value=0.034  Score=45.38  Aligned_cols=40  Identities=28%  Similarity=0.326  Sum_probs=34.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      ++++++|+|+++++|..++..+...|++  +++.+++.++.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~--v~~~~~~~~~~~  183 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGAT--VIATTRTSEKRD  183 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCE--EEEEcCCHHHHH
Confidence            4789999999999999999999999987  888887765433

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.31  E-value=0.38  Score=39.81  Aligned_cols=117  Identities=13%  Similarity=0.068  Sum_probs=70.3

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcC--C--CceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRF--P--ERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~--~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +.|.|+ |.+|..+|..++..+.-..+++.+.+++.++. ..++....  .  .++....   .+.+++           
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~~-----------   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDDC-----------   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHHh-----------
Confidence            678888 99999999999988874469999998876543 33332211  1  1233332   222222           


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ..-|++|..||...        .+-  .+.+ -.+.    +.....+.+.+.+.+.+.+..     +.++++|-...
T Consensus        67 ~~aDivvitaG~~~--------kpg--~tr~-R~dl----l~~N~~I~~~i~~~i~~~~p~-----~i~ivvsNPvD  123 (307)
T cd05290          67 ADADIIVITAGPSI--------DPG--NTDD-RLDL----AQTNAKIIREIMGNITKVTKE-----AVIILITNPLD  123 (307)
T ss_pred             CCCCEEEECCCCCC--------CCC--CCch-HHHH----HHHHHHHHHHHHHHHHHhCCC-----eEEEEecCcHH
Confidence            37899999999753        111  1100 0111    234556778888887776544     47777776543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.31  E-value=0.051  Score=44.76  Aligned_cols=40  Identities=13%  Similarity=0.167  Sum_probs=33.5

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      .+.+++|.|+++++|..++..+...|++  |+.+++++++.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~--vi~~~~~~~~~~  184 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGAR--VVGIAGSDEKCR  184 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCE--EEEEeCCHHHHH
Confidence            4789999999999999999888888986  888887765433

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.27  E-value=0.037  Score=43.70  Aligned_cols=39  Identities=21%  Similarity=0.279  Sum_probs=33.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCC-cEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDK-GCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~-~~vi~~~r~   63 (214)
                      .++++++++|.|+ |+.|..+++.|++.|.. ..|.+++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            4688999999999 79999999999999873 138899998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.27  E-value=0.43  Score=39.79  Aligned_cols=40  Identities=25%  Similarity=0.013  Sum_probs=33.2

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~   67 (214)
                      ++.+++.|.| +|.+|..++..++..|.. .|++++.+++.+
T Consensus         4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~-~i~LvDi~~~~~   43 (321)
T PTZ00082          4 IKRRKISLIG-SGNIGGVMAYLIVLKNLG-DVVLFDIVKNIP   43 (321)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCC-eEEEEeCCCchh
Confidence            3557899999 478999999999999963 399999998864

>PRK08328 hypothetical protein; Provisional

Probab=95.25  E-value=0.097  Score=41.46  Aligned_cols=41  Identities=20%  Similarity=0.144  Sum_probs=34.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      -.+++++|+|.|++ |+|.++++.|++.|.. ++.++|.+.-.
T Consensus        23 ~~L~~~~VlIiG~G-GlGs~ia~~La~~Gvg-~i~lvD~D~ve   63 (231)
T PRK08328         23 EKLKKAKVAVVGVG-GLGSPVAYYLAAAGVG-RILLIDEQTPE   63 (231)
T ss_pred             HHHhCCcEEEECCC-HHHHHHHHHHHHcCCC-EEEEEcCCccC
Confidence            45778899999875 8999999999999997 78888876543

>PLN03139 formate dehydrogenase; Provisional

Probab=95.21  E-value=0.11  Score=44.45  Aligned_cols=38  Identities=18%  Similarity=0.117  Sum_probs=33.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      .+++||++.|.| .|.||+.+|+.|...|.+  |+..+++.
T Consensus       195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~--V~~~d~~~  232 (386)
T PLN03139        195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCN--LLYHDRLK  232 (386)
T ss_pred             cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCE--EEEECCCC
Confidence            579999999999 578999999999999997  88888764

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.20  E-value=0.19  Score=35.45  Aligned_cols=41  Identities=22%  Similarity=0.220  Sum_probs=27.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~   70 (214)
                      +|.|.|+||-+|..+++.|.++-.--.+.+.++.....+.+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~   41 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPL   41 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCee
Confidence            47899999999999999998853321234445544233333

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.20  E-value=0.058  Score=46.32  Aligned_cols=45  Identities=16%  Similarity=0.173  Sum_probs=32.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcC--CCcEEEEeecCCCCcccccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGLLD   72 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g--~~~~vi~~~r~~~~~~~~~~   72 (214)
                      .|.+++|.|++|++|..++..+...|  +. .|+++++++++++.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~-~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPS-LLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCc-eEEEEcCCHHHHHHHHH
Confidence            36799999999999999886555544  33 48888888776554433

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PLN02740 Alcohol dehydrogenase-like

Probab=95.19  E-value=0.07  Score=45.32  Aligned_cols=80  Identities=13%  Similarity=0.188  Sum_probs=50.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCH-HHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~  105 (214)
                      .|.+++|.|+ |++|..++......|+. .|+++++++++++.+.+    .+... ++  |..+. +.+.+.+.++..  
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~-~Vi~~~~~~~r~~~a~~----~Ga~~-~i--~~~~~~~~~~~~v~~~~~--  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGAS-KIIGVDINPEKFEKGKE----MGITD-FI--NPKDSDKPVHERIREMTG--  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCC-cEEEEcCChHHHHHHHH----cCCcE-EE--ecccccchHHHHHHHHhC--
Confidence            4789999985 89999999877788884 48888888776554422    23221 22  33322 123333333322  


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      +.+|++|.+.|.
T Consensus       267 ~g~dvvid~~G~  278 (381)
T PLN02740        267 GGVDYSFECAGN  278 (381)
T ss_pred             CCCCEEEECCCC
Confidence            258999999884

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.16  E-value=0.07  Score=38.24  Aligned_cols=53  Identities=19%  Similarity=0.236  Sum_probs=36.1

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEE
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL   84 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~   84 (214)
                      +.|.|+||.||.....-+.+...+..|+.++-+. +.+.+.+++.++..++..+
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~-n~~~L~~q~~~f~p~~v~i   53 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGS-NIEKLAEQAREFKPKYVVI   53 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESS-THHHHHHHHHHHT-SEEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCC-CHHHHHHHHHHhCCCEEEE
Confidence            5799999999999998887777444466665533 3455666666665555443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.07  E-value=0.048  Score=43.03  Aligned_cols=74  Identities=22%  Similarity=0.274  Sum_probs=52.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHH-HHHHHHHcCCc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEAS-AKSIKEKYGSL  108 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~-~~~~~~~~~~v  108 (214)
                      .++|.|+ |-+|..+|+.|.+.|.+  |++.+++++..++....    ...++.+.+|-++++.++++ ++       ..
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~--Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~agi~-------~a   67 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHN--VVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLEEAGID-------DA   67 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCc--eEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHHhcCCC-------cC
Confidence            4556655 57999999999999998  99999988765542110    12467888888888877655 33       45


Q ss_pred             cEEEECccc
Q 028056          109 NLLINASGI  117 (214)
Q Consensus       109 d~lv~nag~  117 (214)
                      |++|-..+.
T Consensus        68 D~vva~t~~   76 (225)
T COG0569          68 DAVVAATGN   76 (225)
T ss_pred             CEEEEeeCC
Confidence            666665554

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.03  E-value=0.08  Score=44.75  Aligned_cols=80  Identities=19%  Similarity=0.207  Sum_probs=49.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCC-HHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~  105 (214)
                      .|.+++|+|+ |++|..++......|+. .|+.+++++++++.+.+    .+... .  .|..+ .+.+.+.+.++..  
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~-~Vi~~~~~~~~~~~a~~----~Ga~~-~--i~~~~~~~~~~~~v~~~~~--  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKAS-RIIAIDINPAKFELAKK----LGATD-C--VNPNDYDKPIQEVIVEITD--  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH----hCCCe-E--EcccccchhHHHHHHHHhC--
Confidence            3789999975 89999998877778884 48888887766544322    22211 1  23332 2233333333322  


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      +.+|++|.++|.
T Consensus       254 ~g~d~vid~~G~  265 (368)
T TIGR02818       254 GGVDYSFECIGN  265 (368)
T ss_pred             CCCCEEEECCCC
Confidence            368999999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.02  E-value=0.082  Score=44.64  Aligned_cols=80  Identities=16%  Similarity=0.221  Sum_probs=51.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCH-HHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~  105 (214)
                      .+.+++|.|+ |++|..++..+...|+. .|+.+++++++.+.+.+    .+.. .+  .|..+. +++.+.+.++..  
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~-~vi~~~~~~~~~~~~~~----lGa~-~~--i~~~~~~~~~~~~v~~~~~--  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGAS-RIIGIDINPDKFELAKK----FGAT-DC--VNPKDHDKPIQQVLVEMTD--  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHH----cCCC-EE--EcccccchHHHHHHHHHhC--
Confidence            4789999975 89999999888888984 48888888776553322    2322 12  233332 234444444432  


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      +.+|+++.+.|.
T Consensus       255 ~g~d~vid~~g~  266 (368)
T cd08300         255 GGVDYTFECIGN  266 (368)
T ss_pred             CCCcEEEECCCC
Confidence            368999998874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.01  E-value=0.071  Score=44.28  Aligned_cols=79  Identities=16%  Similarity=0.125  Sum_probs=48.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+++|+|+ |++|..++..+...|++ .|+++++++++.+.+.    +.+.. .+  .|..+.+ .+++. ++.. ..
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~-~vi~~~~~~~~~~~~~----~~ga~-~~--i~~~~~~-~~~~~-~~~~-~~  230 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAE-DVIGVDPSPERLELAK----ALGAD-FV--INSGQDD-VQEIR-ELTS-GA  230 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHH----HhCCC-EE--EcCCcch-HHHHH-HHhC-CC
Confidence            4789999976 89999999888888886 5888887776544332    22321 11  2333333 22222 2211 12


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|.+.|.
T Consensus       231 ~~d~vid~~g~  241 (339)
T cd08239         231 GADVAIECSGN  241 (339)
T ss_pred             CCCEEEECCCC
Confidence            58999888774

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.00  E-value=0.052  Score=39.55  Aligned_cols=40  Identities=23%  Similarity=0.219  Sum_probs=35.0

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..+++||.++|.|.+.-.|..++..|.++|+.  |.++.++.
T Consensus        23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gat--V~~~~~~t   62 (140)
T cd05212          23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGAT--VYSCDWKT   62 (140)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEeCCCC
Confidence            35789999999999999999999999999997  77776544

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=94.94  E-value=0.58  Score=38.74  Aligned_cols=78  Identities=19%  Similarity=0.131  Sum_probs=49.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcC--CCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +.|.|+|+ |.+|.+++..|+.++...-+++.+.+++.++. ..++....  ...-..+..| .+.+++           
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~~-----------   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYEDL-----------   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhhh-----------
Confidence            36889999 99999999999888765469999999665543 22222111  0011222222 222222           


Q ss_pred             CCccEEEECccccC
Q 028056          106 GSLNLLINASGILS  119 (214)
Q Consensus       106 ~~vd~lv~nag~~~  119 (214)
                      ..-|++|-.||...
T Consensus        68 ~~aDiVvitAG~pr   81 (313)
T COG0039          68 KGADIVVITAGVPR   81 (313)
T ss_pred             cCCCEEEEeCCCCC
Confidence            37899999999764

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.88  E-value=0.11  Score=43.47  Aligned_cols=39  Identities=15%  Similarity=0.112  Sum_probs=34.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      ..+.||++.|.|- |.||+.+|+.+...|.+  |+.++|+..
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~--V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMR--ILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCE--EEEECCCCC
Confidence            5789999999998 78999999999999987  888888754

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.88  E-value=0.12  Score=44.60  Aligned_cols=41  Identities=32%  Similarity=0.335  Sum_probs=35.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~   67 (214)
                      ..+.|++++|.|. |.||+.++..+...|++  |+++++++.+.
T Consensus       208 ~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~--ViV~d~dp~ra  248 (425)
T PRK05476        208 VLIAGKVVVVAGY-GDVGKGCAQRLRGLGAR--VIVTEVDPICA  248 (425)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEcCCchhh
Confidence            4578999999997 68999999999999997  99999887653

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=94.84  E-value=0.41  Score=40.89  Aligned_cols=116  Identities=10%  Similarity=0.055  Sum_probs=66.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCc-----EEEEe--ecCCCCccc-ccchhhcC---CCceeEEEecCCCHHHHHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKG-----CVIAT--CRNPNGATG-LLDLKNRF---PERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~-----~vi~~--~r~~~~~~~-~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      .|.|+|++|.+|.++|..++..|.-.     .++|+  +++++.++. ..++....   ..++. +..  .+.++     
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i~~--~~y~~-----  117 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-IGI--DPYEV-----  117 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-Eec--CCHHH-----
Confidence            78999999999999999999888643     34444  777776553 22222211   11111 111  12222     


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhc-CCCCCCCCceEEEEe
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANL  177 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~~~~~~~iv~i  177 (214)
                            +...|++|..||...        .+-  .+..   +.+    .....+.+.+.+.+.+ .+..     +.+|++
T Consensus       118 ------~kdaDIVVitAG~pr--------kpg--~tR~---dll----~~N~~I~k~i~~~I~~~a~~~-----~iviVV  169 (387)
T TIGR01757       118 ------FEDADWALLIGAKPR--------GPG--MERA---DLL----DINGQIFADQGKALNAVASKN-----CKVLVV  169 (387)
T ss_pred             ------hCCCCEEEECCCCCC--------CCC--CCHH---HHH----HHHHHHHHHHHHHHHHhCCCC-----eEEEEc
Confidence                  247899999999753        111  1111   123    3345566777777666 3222     377777


Q ss_pred             ecCc
Q 028056          178 SARV  181 (214)
Q Consensus       178 ss~~  181 (214)
                      |..+
T Consensus       170 sNPv  173 (387)
T TIGR01757       170 GNPC  173 (387)
T ss_pred             CCcH
Confidence            7644

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=94.80  E-value=0.2  Score=38.26  Aligned_cols=115  Identities=13%  Similarity=0.101  Sum_probs=76.4

Q ss_pred             ccccccCcEEEEecCCCch-hHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGI-GLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~gi-G~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ...+++||+|+=.|++.|+ |...    +-.|+. .|+.++.+++..+.+.+.+.+..+++.++.+|+++..        
T Consensus        40 ~~g~l~g~~V~DlG~GTG~La~ga----~~lGa~-~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~--------  106 (198)
T COG2263          40 LRGDLEGKTVLDLGAGTGILAIGA----ALLGAS-RVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR--------  106 (198)
T ss_pred             HcCCcCCCEEEEcCCCcCHHHHHH----HhcCCc-EEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC--------
Confidence            4467899999999977654 3322    335776 6999999998888777777777788999999997654        


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHH
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHM  156 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  156 (214)
                           +++|.+|.|.....-  ..+.+-++.+...+--+-.+.+.-.++..+.+..
T Consensus       107 -----~~~dtvimNPPFG~~--~rhaDr~Fl~~Ale~s~vVYsiH~a~~~~f~~~~  155 (198)
T COG2263         107 -----GKFDTVIMNPPFGSQ--RRHADRPFLLKALEISDVVYSIHKAGSRDFVEKF  155 (198)
T ss_pred             -----CccceEEECCCCccc--cccCCHHHHHHHHHhhheEEEeeccccHHHHHHH
Confidence                 478899999855420  0112333444444444556666666655554443

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=94.77  E-value=0.07  Score=43.71  Aligned_cols=80  Identities=16%  Similarity=0.211  Sum_probs=49.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+.+++|+|+++++|..++..+...|++  |+.+++++++.+.+.    +.+.. .+  .|..+.+..+.+.+ ... ..
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~--v~~~~~~~~~~~~~~----~~g~~-~~--~~~~~~~~~~~~~~-~~~-~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGAT--VVGAAGGPAKTALVR----ALGAD-VA--VDYTRPDWPDQVRE-ALG-GG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----HcCCC-EE--EecCCccHHHHHHH-HcC-CC
Confidence            3689999999999999999888888987  888887776544332    22221 11  23333332222221 111 12


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|.++++.|.
T Consensus       211 ~~d~vl~~~g~  221 (324)
T cd08244         211 GVTVVLDGVGG  221 (324)
T ss_pred             CceEEEECCCh
Confidence            58999988763

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=94.76  E-value=0.18  Score=41.86  Aligned_cols=92  Identities=16%  Similarity=0.108  Sum_probs=55.0

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccc------hhhcCCCceeEEEecCCCHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD------LKNRFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~------~~~~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      ...++||++.|.|- |.||.++|+.|...|.+  |++.++.....+...+      ...+.-.+..++..-+.+++. ..
T Consensus        11 ~~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~--ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t-~~   86 (335)
T PRK13403         11 VELLQGKTVAVIGY-GSQGHAQAQNLRDSGVE--VVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQ-AH   86 (335)
T ss_pred             hhhhCcCEEEEEeE-cHHHHHHHHHHHHCcCE--EEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHH-HH
Confidence            35689999999987 67999999999999998  7776664332221110      111111122333333444444 45


Q ss_pred             HH-HHHHHHcCCccEEEECcccc
Q 028056           97 SA-KSIKEKYGSLNLLINASGIL  118 (214)
Q Consensus        97 ~~-~~~~~~~~~vd~lv~nag~~  118 (214)
                      ++ +++.....+=.+|+...|++
T Consensus        87 V~~~eil~~MK~GaiL~f~hgfn  109 (335)
T PRK13403         87 VYKAEVEENLREGQMLLFSHGFN  109 (335)
T ss_pred             HHHHHHHhcCCCCCEEEECCCcc
Confidence            55 45555555556777777765

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.75  E-value=0.22  Score=39.64  Aligned_cols=41  Identities=15%  Similarity=0.103  Sum_probs=34.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      ..+++++|+|.|++ |+|..++..|++.|.. ++.++|.+.-.
T Consensus        20 ~~L~~~~VlvvG~G-glGs~va~~La~~Gvg-~i~lvD~D~ve   60 (240)
T TIGR02355        20 EALKASRVLIVGLG-GLGCAASQYLAAAGVG-NLTLLDFDTVS   60 (240)
T ss_pred             HHHhCCcEEEECcC-HHHHHHHHHHHHcCCC-EEEEEeCCccc
Confidence            45788889998765 8999999999999997 78888876543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.75  E-value=0.076  Score=46.09  Aligned_cols=62  Identities=24%  Similarity=0.160  Sum_probs=43.3

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTI   94 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   94 (214)
                      ...+.++|.|+ |.+|..+++.|.+.|.+  |++.+++++..+.+.+.    +..+..+.+|.++++.+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~--v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L  290 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYS--VKLIERDPERAEELAEE----LPNTLVLHGDGTDQELL  290 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHH
Confidence            34688999999 89999999999999997  88888887654332221    12344555566555444

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.73  E-value=0.031  Score=43.80  Aligned_cols=38  Identities=24%  Similarity=0.274  Sum_probs=32.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      ++.|+||+|.+|.++++.|++.|.+  |++.+|++++.+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~--V~v~~r~~~~~~~   39 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNK--IIIGSRDLEKAEE   39 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCE--EEEEEcCHHHHHH
Confidence            4889999999999999999999986  8888998876543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.73  E-value=0.051  Score=44.65  Aligned_cols=41  Identities=22%  Similarity=0.227  Sum_probs=36.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      .+++||.+.|.|.++-+|+.++..|.++|+.  |.++.+....
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gat--Vtv~~~~t~~  195 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCS--VTVVHSRSTD  195 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCE--EEEECCCCCC
Confidence            5789999999999999999999999999997  8888766543

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.72  E-value=0.26  Score=40.63  Aligned_cols=116  Identities=14%  Similarity=0.073  Sum_probs=66.0

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC---CceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +.|.|+ |.+|..++..++..|.-..+++.+++++.++.....+....   .......+  ++.++           +..
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~~-----------l~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYAD-----------AAD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHHH-----------hCC
Confidence            357786 67999999999998853359999998876554222221111   11122211  22222           137


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      -|++|.++|...        .+-  .+..+   .    +....-+.+.+.+.+++...+     +.+++++....
T Consensus        67 aDiVIitag~p~--------~~~--~~R~~---l----~~~n~~i~~~~~~~i~~~~p~-----~~viv~sNP~d  119 (300)
T cd00300          67 ADIVVITAGAPR--------KPG--ETRLD---L----INRNAPILRSVITNLKKYGPD-----AIILVVSNPVD  119 (300)
T ss_pred             CCEEEEcCCCCC--------CCC--CCHHH---H----HHHHHHHHHHHHHHHHHhCCC-----eEEEEccChHH
Confidence            899999999753        111  11111   1    233455667777776665433     47888876543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.70  E-value=0.099  Score=43.94  Aligned_cols=42  Identities=17%  Similarity=0.094  Sum_probs=32.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~   70 (214)
                      .+.+++|.|+ |++|..++......|++ +|+.+++++++.+.+
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~-~Vi~~~~~~~~~~~~  217 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGAS-KIIAVDIDDRKLEWA  217 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHH
Confidence            4789999975 89999998877778885 588888877664433

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=94.68  E-value=0.13  Score=40.76  Aligned_cols=38  Identities=18%  Similarity=0.098  Sum_probs=31.9

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      .+++++|+|.|.+ |+|..+++.|++.|.. ++.++|.+.
T Consensus         8 ~L~~~~VlVvG~G-GvGs~va~~Lar~GVg-~i~LvD~D~   45 (231)
T cd00755           8 KLRNAHVAVVGLG-GVGSWAAEALARSGVG-KLTLIDFDV   45 (231)
T ss_pred             HHhCCCEEEECCC-HHHHHHHHHHHHcCCC-EEEEECCCE
Confidence            4678889999765 8999999999999997 788887653

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=94.65  E-value=0.14  Score=41.44  Aligned_cols=38  Identities=16%  Similarity=0.101  Sum_probs=31.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      -.|++..|+|.|++ |+|..+|+.|++.|.. .+.+++.+
T Consensus        26 ~kL~~s~VlVvG~G-GVGs~vae~Lar~GVg-~itLiD~D   63 (268)
T PRK15116         26 QLFADAHICVVGIG-GVGSWAAEALARTGIG-AITLIDMD   63 (268)
T ss_pred             HHhcCCCEEEECcC-HHHHHHHHHHHHcCCC-EEEEEeCC
Confidence            45788889999765 8999999999999976 68777765

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.61  E-value=0.098  Score=42.37  Aligned_cols=40  Identities=30%  Similarity=0.319  Sum_probs=31.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      .+++++|.|+ |++|..++..+...|++ .|+++++++++.+
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~-~Vi~~~~~~~r~~  159 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAA-RVVAADPSPDRRE  159 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHH
Confidence            5789999986 89999998877778886 5777777665543

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.58  E-value=0.18  Score=42.18  Aligned_cols=40  Identities=23%  Similarity=0.113  Sum_probs=34.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      ..++|+++.|.|. |.||..+|+.|...|.+  |+..++++..
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~--V~~~d~~~~~  181 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGAT--ITAYDAYPNK  181 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEeCChhH
Confidence            4689999999976 57999999999999997  9999987653

>PRK07574 formate dehydrogenase; Provisional

Probab=94.58  E-value=0.24  Score=42.30  Aligned_cols=38  Identities=26%  Similarity=0.232  Sum_probs=33.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..++||++.|.|- |.||+.+|+.+...|.+  |+..+|+.
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~--V~~~dr~~  225 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVK--LHYTDRHR  225 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEECCCC
Confidence            5789999999998 56999999999999997  88888875

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.57  E-value=0.31  Score=36.14  Aligned_cols=36  Identities=17%  Similarity=0.170  Sum_probs=30.6

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC   61 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~   61 (214)
                      ..+++||.++|.||+ .+|...++.|.+.|++  |.+++
T Consensus         8 ~l~l~~~~vlVvGGG-~va~rka~~Ll~~ga~--V~VIs   43 (157)
T PRK06719          8 MFNLHNKVVVIIGGG-KIAYRKASGLKDTGAF--VTVVS   43 (157)
T ss_pred             EEEcCCCEEEEECCC-HHHHHHHHHHHhCCCE--EEEEc
Confidence            477899999999986 6999999999999998  55554

>PRK07877 hypothetical protein; Provisional

Probab=94.56  E-value=0.085  Score=48.58  Aligned_cols=38  Identities=13%  Similarity=-0.039  Sum_probs=31.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCC-CcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~-~~~vi~~~r~~   64 (214)
                      -.+++++|+|.|. | +|..++..|+..|. . ++.+++.+.
T Consensus       103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG-~l~lvD~D~  141 (722)
T PRK07877        103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCG-ELRLADFDT  141 (722)
T ss_pred             HHHhcCCEEEEEe-c-HHHHHHHHHHHccCCC-eEEEEcCCE
Confidence            3467899999999 4 99999999999994 4 588887754

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.55  E-value=0.066  Score=39.89  Aligned_cols=41  Identities=24%  Similarity=0.306  Sum_probs=31.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      .+++||.++|.|.|.-+|+.++..|.++|+.  |.++......
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~at--Vt~~h~~T~~   72 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGAT--VTICHSKTKN   72 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-E--EEEE-TTSSS
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCe--EEeccCCCCc
Confidence            5689999999999999999999999999996  7766655433

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.52  E-value=0.21  Score=41.87  Aligned_cols=38  Identities=21%  Similarity=0.132  Sum_probs=29.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCC-cEEEEeecCCCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDK-GCVIATCRNPNG   66 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~-~~vi~~~r~~~~   66 (214)
                      .+|+|.||||..|.++++.|.+++.. ..+..+.++...
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~   40 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSA   40 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccC
Confidence            47999999999999999999997764 124556655443

>PLN02827 Alcohol dehydrogenase-like

Probab=94.47  E-value=0.14  Score=43.48  Aligned_cols=80  Identities=20%  Similarity=0.254  Sum_probs=48.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCH-HHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~  105 (214)
                      .|.+++|.|+ |++|..++......|+. .|+++++++++.+.+.    +.+.. .+  .|..+. +++.+.+.++..  
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~-~vi~~~~~~~~~~~a~----~lGa~-~~--i~~~~~~~~~~~~v~~~~~--  261 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGAS-QIIGVDINPEKAEKAK----TFGVT-DF--INPNDLSEPIQQVIKRMTG--  261 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCHHHHHHHH----HcCCc-EE--EcccccchHHHHHHHHHhC--
Confidence            4889999985 89999998877778885 4677777665544332    22321 12  233221 233333333322  


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      +.+|++|.+.|.
T Consensus       262 ~g~d~vid~~G~  273 (378)
T PLN02827        262 GGADYSFECVGD  273 (378)
T ss_pred             CCCCEEEECCCC
Confidence            268999999884

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=94.47  E-value=0.17  Score=41.84  Aligned_cols=37  Identities=19%  Similarity=0.204  Sum_probs=31.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      .+++++|.|+++++|..++......|++  +++++++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~--v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIK--TINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCe--EEEEEcCCC
Confidence            4789999999999999999888888887  777766553

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.42  E-value=0.042  Score=44.68  Aligned_cols=42  Identities=19%  Similarity=0.166  Sum_probs=35.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccccc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL   71 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~   71 (214)
                      +++++|.|+ ||-+++++..|++.|+. .|.+++|+.++.+.+.
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~-~i~i~nR~~~~a~~la  163 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFT-DGTIVARNEKTGKALA  163 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHH
Confidence            468999996 89999999999999997 7999999987655443

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.41  E-value=0.12  Score=42.38  Aligned_cols=41  Identities=20%  Similarity=0.192  Sum_probs=33.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      .|.+++|.|+++++|..++......|++  ++++.++.++.+.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~--v~~~~~~~~~~~~  179 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGIN--VINLVRRDAGVAE  179 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCe--EEEEecCHHHHHH
Confidence            4789999999999999999988888997  7777776655433

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.38  E-value=0.32  Score=41.47  Aligned_cols=73  Identities=15%  Similarity=0.140  Sum_probs=50.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +.|+++|+|++ ..|..+++.+.+.|++  +++++.++......   .   ..  ..+..|..|.+.+.+++++.     
T Consensus        11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~--v~~~~~~~~~~~~~---~---ad--~~~~~~~~d~~~l~~~~~~~-----   74 (395)
T PRK09288         11 SATRVMLLGSG-ELGKEVAIEAQRLGVE--VIAVDRYANAPAMQ---V---AH--RSHVIDMLDGDALRAVIERE-----   74 (395)
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEeCCCCCchHH---h---hh--heEECCCCCHHHHHHHHHHh-----
Confidence            56799999875 6899999999999997  88888776431110   0   01  24566788887776666532     


Q ss_pred             CccEEEECc
Q 028056          107 SLNLLINAS  115 (214)
Q Consensus       107 ~vd~lv~na  115 (214)
                      .+|.++...
T Consensus        75 ~id~vi~~~   83 (395)
T PRK09288         75 KPDYIVPEI   83 (395)
T ss_pred             CCCEEEEee
Confidence            688887543

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.38  E-value=0.13  Score=43.45  Aligned_cols=79  Identities=15%  Similarity=0.205  Sum_probs=47.5

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+.+|+|.|+ |++|..++......|++ .|+++++++++++.+.    +.+.. .+  .|..+++..++ +.++..  +
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~-~Vi~~~~~~~r~~~a~----~~Ga~-~~--i~~~~~~~~~~-i~~~~~--~  258 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGAS-QVVAVDLNEDKLALAR----ELGAT-AT--VNAGDPNAVEQ-VRELTG--G  258 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-cEEEEcCCHHHHHHHH----HcCCc-eE--eCCCchhHHHH-HHHHhC--C
Confidence            4789999985 89999988777778884 4888888776644332    22221 11  23333222222 222211  2


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|.+.|.
T Consensus       259 g~d~vid~~G~  269 (371)
T cd08281         259 GVDYAFEMAGS  269 (371)
T ss_pred             CCCEEEECCCC
Confidence            58999988874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.35  E-value=0.42  Score=39.64  Aligned_cols=87  Identities=16%  Similarity=0.074  Sum_probs=53.0

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc---------ccchhhcCCCceeEEEecCCCHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG---------LLDLKNRFPERLDVLQLDLTVEST   93 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~---------~~~~~~~~~~~~~~~~~Dl~~~~~   93 (214)
                      ...++||++.|.|- |.||+.+|+.+...|.+  |+..++.......         +.+.+.  ...+..+.+-++  ++
T Consensus       131 ~~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~--V~~~~~~~~~~~~~~~~~~~~~l~e~l~--~aDvvv~~lPlt--~~  203 (312)
T PRK15469        131 EYHREDFTIGILGA-GVLGSKVAQSLQTWGFP--LRCWSRSRKSWPGVQSFAGREELSAFLS--QTRVLINLLPNT--PE  203 (312)
T ss_pred             CCCcCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCCCCCCCceeecccccHHHHHh--cCCEEEECCCCC--HH
Confidence            35688999999975 47999999999999997  8888876543211         111111  234444444444  44


Q ss_pred             HHHHHH-HHHHHcCCccEEEECcc
Q 028056           94 IEASAK-SIKEKYGSLNLLINASG  116 (214)
Q Consensus        94 v~~~~~-~~~~~~~~vd~lv~nag  116 (214)
                      .+.++. +..+...+=-++||.+-
T Consensus       204 T~~li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        204 TVGIINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             HHHHhHHHHHhcCCCCcEEEECCC
Confidence            555553 34444444345555553

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.35  E-value=0.17  Score=42.72  Aligned_cols=80  Identities=15%  Similarity=0.266  Sum_probs=49.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCH-HHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~  105 (214)
                      .|.+++|.|+ |++|..++......|+. +|+++++++++.+.+    .+.+.. .++  |..+. +++.+.+.++..  
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~-~vi~~~~~~~~~~~~----~~~Ga~-~~i--~~~~~~~~~~~~v~~~~~--  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGAS-RIIGVDLNPSKFEQA----KKFGVT-EFV--NPKDHDKPVQEVIAEMTG--  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHH----HHcCCc-eEE--cccccchhHHHHHHHHhC--
Confidence            4789999985 89999998877778883 488888887654433    222321 122  22221 234343444332  


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      +.+|+++.+.|.
T Consensus       256 ~~~d~vid~~G~  267 (369)
T cd08301         256 GGVDYSFECTGN  267 (369)
T ss_pred             CCCCEEEECCCC
Confidence            268999988764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.31  E-value=0.15  Score=42.05  Aligned_cols=40  Identities=28%  Similarity=0.297  Sum_probs=33.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      ++.+++|.|+++++|..++......|.+  |+.+++++++.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~--v~~~~~~~~~~~  178 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCH--VIGTCSSDEKAE  178 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCe--EEEEeCcHHHHH
Confidence            4789999999999999998888888887  888887765543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK14852 hypothetical protein; Provisional

Probab=94.26  E-value=0.14  Score=48.39  Aligned_cols=39  Identities=10%  Similarity=-0.033  Sum_probs=33.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      -.|++.+|+|.| .||+|..++..|+..|.. .+.++|.+.
T Consensus       328 ~kL~~srVlVvG-lGGlGs~ia~~LAraGVG-~I~L~D~D~  366 (989)
T PRK14852        328 RRLLRSRVAIAG-LGGVGGIHLMTLARTGIG-NFNLADFDA  366 (989)
T ss_pred             HHHhcCcEEEEC-CcHHHHHHHHHHHHcCCC-eEEEEcCCE
Confidence            457889999998 569999999999999996 788877654

>PRK06487 glycerate dehydrogenase; Provisional

Probab=94.23  E-value=0.19  Score=41.74  Aligned_cols=37  Identities=16%  Similarity=0.079  Sum_probs=32.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      ..+.||++.|.|- |.||+.+|+.+..-|.+  |+..++.
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~--V~~~~~~  180 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMR--VLIGQLP  180 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCE--EEEECCC
Confidence            4689999999998 68999999999988887  8888775

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.20  E-value=0.16  Score=41.74  Aligned_cols=79  Identities=22%  Similarity=0.184  Sum_probs=52.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++||.++|.|-++-+|..+|..|.++|+.  |.++. |+. .   +.+...    +...+.+-+.+++.++..+    
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~t--Vtv~~~rT~-~---l~e~~~----~ADIVIsavg~~~~v~~~~----  219 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANAT--VTIAHSRTR-D---LPAVCR----RADILVAAVGRPEMVKGDW----  219 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCE--EEEECCCCC-C---HHHHHh----cCCEEEEecCChhhcchhe----
Confidence            4689999999999999999999999999997  87774 554 2   222221    2334555566666554433    


Q ss_pred             HHcCCccEEEECccccC
Q 028056          103 EKYGSLNLLINASGILS  119 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~  119 (214)
                         -+...+|-..|+..
T Consensus       220 ---lk~GavVIDvGin~  233 (296)
T PRK14188        220 ---IKPGATVIDVGINR  233 (296)
T ss_pred             ---ecCCCEEEEcCCcc
Confidence               13455666667653

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.20  E-value=0.18  Score=42.16  Aligned_cols=40  Identities=25%  Similarity=0.317  Sum_probs=33.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      .+.+++|.|+ |++|..++......|++  |+++++++++++.
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~--vi~~~~~~~~~~~  205 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAA--VVAIDIDPEKLEM  205 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCe--EEEEcCCHHHHHH
Confidence            4789999999 99999998877788886  8888887766443

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=94.17  E-value=0.22  Score=41.77  Aligned_cols=77  Identities=22%  Similarity=0.278  Sum_probs=45.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+++++|+|+ |++|...+.-+...|++  |++++++....++ .+...+.+..  .+  |..+. ++.+    . +..+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~--vi~~~~~~~~~~~-~~~~~~~Ga~--~v--~~~~~-~~~~----~-~~~~  237 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFE--VYVLNRRDPPDPK-ADIVEELGAT--YV--NSSKT-PVAE----V-KLVG  237 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCe--EEEEecCCCCHHH-HHHHHHcCCE--Ee--cCCcc-chhh----h-hhcC
Confidence            5789999985 99999999777778886  8888884321111 1122233332  22  33222 2221    1 1124


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|.+.|.
T Consensus       238 ~~d~vid~~g~  248 (355)
T cd08230         238 EFDLIIEATGV  248 (355)
T ss_pred             CCCEEEECcCC
Confidence            68999998874

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK07411 hypothetical protein; Validated

Probab=94.12  E-value=0.21  Score=42.81  Aligned_cols=39  Identities=15%  Similarity=0.089  Sum_probs=33.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..++..+|+|.|++ |+|..+++.|+..|.. ++.++|.+.
T Consensus        34 ~~L~~~~VlivG~G-GlG~~va~~La~~Gvg-~l~lvD~D~   72 (390)
T PRK07411         34 KRLKAASVLCIGTG-GLGSPLLLYLAAAGIG-RIGIVDFDV   72 (390)
T ss_pred             HHHhcCcEEEECCC-HHHHHHHHHHHHcCCC-EEEEECCCE
Confidence            46788899999775 8999999999999997 788887753

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.12  E-value=0.092  Score=47.08  Aligned_cols=62  Identities=11%  Similarity=0.129  Sum_probs=44.5

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      ++++ .++|.|. |.+|+.++++|.++|.+  +++.+.|+++.++..+      ..+..+.+|.+|++..++
T Consensus       415 ~~~~-hiiI~G~-G~~G~~la~~L~~~g~~--vvvId~d~~~~~~~~~------~g~~~i~GD~~~~~~L~~  476 (558)
T PRK10669        415 DICN-HALLVGY-GRVGSLLGEKLLAAGIP--LVVIETSRTRVDELRE------RGIRAVLGNAANEEIMQL  476 (558)
T ss_pred             ccCC-CEEEECC-ChHHHHHHHHHHHCCCC--EEEEECCHHHHHHHHH------CCCeEEEcCCCCHHHHHh
Confidence            3444 4555554 57999999999999998  8999988876444322      246688889988877654

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.10  E-value=0.19  Score=41.11  Aligned_cols=40  Identities=15%  Similarity=0.119  Sum_probs=33.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      .+.+++|.|+++++|..++..+...|++  +++++++.++.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~--v~~~~~~~~~~~  177 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFK--TINVVRRDEQVE  177 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCe--EEEEecChHHHH
Confidence            4689999999999999999988889987  888887776543

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=94.10  E-value=0.17  Score=41.63  Aligned_cols=41  Identities=29%  Similarity=0.350  Sum_probs=34.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~   70 (214)
                      +.+++|.|+++++|..++......|++  |+.+++++++.+.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~--v~~~~~~~~~~~~~  187 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYE--VVASTGKADAADYL  187 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCe--EEEEecCHHHHHHH
Confidence            679999999999999999888888987  88888887664433

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=94.08  E-value=0.24  Score=42.23  Aligned_cols=87  Identities=14%  Similarity=0.092  Sum_probs=53.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc------cccchhhcCCCceeEEEecCCCHHH--HH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT------GLLDLKNRFPERLDVLQLDLTVEST--IE   95 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~--v~   95 (214)
                      ..++||++.|.|- |.||+.+|+.+...|.+  |+.+++......      .+.+.+.  ...++.+.+-++....  ..
T Consensus       112 ~~L~gktvGIIG~-G~IG~~vA~~l~a~G~~--V~~~dp~~~~~~~~~~~~~L~ell~--~sDiI~lh~PLt~~g~~~T~  186 (378)
T PRK15438        112 FSLHDRTVGIVGV-GNVGRRLQARLEALGIK--TLLCDPPRADRGDEGDFRSLDELVQ--EADILTFHTPLFKDGPYKTL  186 (378)
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHCCCE--EEEECCcccccccccccCCHHHHHh--hCCEEEEeCCCCCCcccccc
Confidence            5789999999998 78999999999999997  888875432111      1222222  2467777777776421  12


Q ss_pred             HHH-HHHHHHcCCccEEEECc
Q 028056           96 ASA-KSIKEKYGSLNLLINAS  115 (214)
Q Consensus        96 ~~~-~~~~~~~~~vd~lv~na  115 (214)
                      .++ ++..+...+=-++||.+
T Consensus       187 ~li~~~~l~~mk~gailIN~a  207 (378)
T PRK15438        187 HLADEKLIRSLKPGAILINAC  207 (378)
T ss_pred             cccCHHHHhcCCCCcEEEECC
Confidence            222 33333443334555555

>PLN02494 adenosylhomocysteinase

Probab=94.05  E-value=0.18  Score=44.00  Aligned_cols=40  Identities=25%  Similarity=0.316  Sum_probs=35.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      ..+.||+++|.|.+ .||+.+|+.+...|++  |+++++++.+
T Consensus       250 i~LaGKtVvViGyG-~IGr~vA~~aka~Ga~--VIV~e~dp~r  289 (477)
T PLN02494        250 VMIAGKVAVICGYG-DVGKGCAAAMKAAGAR--VIVTEIDPIC  289 (477)
T ss_pred             CccCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEeCCchh
Confidence            44789999999987 8999999999999997  8889888754

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=94.04  E-value=0.13  Score=38.94  Aligned_cols=44  Identities=23%  Similarity=0.238  Sum_probs=35.9

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      ......+.|+++.|.|. |.||+++|+.+..-|++  |+..+|....
T Consensus        28 ~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~--V~~~d~~~~~   71 (178)
T PF02826_consen   28 RFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMR--VIGYDRSPKP   71 (178)
T ss_dssp             TTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-E--EEEEESSCHH
T ss_pred             CCCccccCCCEEEEEEE-cCCcCeEeeeeecCCce--eEEecccCCh
Confidence            34456789999999976 78999999999999997  9999988754

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.04  E-value=0.23  Score=43.16  Aligned_cols=36  Identities=36%  Similarity=0.471  Sum_probs=31.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~   67 (214)
                      ++.|.||+|.||.++++.|.+.|.+  |++.+|+++..
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~--V~v~~r~~~~~   37 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFE--VIVTGRDPKKG   37 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCE--EEEEECChHHH
Confidence            5899999999999999999999986  88899987653

>PRK14967 putative methyltransferase; Provisional

Probab=93.97  E-value=0.52  Score=36.94  Aligned_cols=77  Identities=12%  Similarity=0.037  Sum_probs=48.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+.++|-.|++.|.   ++..+++.|.. .|+.++.++...+.+.+.....+.++.++..|+.+.      +.     .+
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~-~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~~-----~~  100 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAG-SVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------VE-----FR  100 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCC-eEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------cc-----CC
Confidence            35788888876544   23344455663 599999988766554444443344566777776431      11     14


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|.+|.|..+.
T Consensus       101 ~fD~Vi~npPy~  112 (223)
T PRK14967        101 PFDVVVSNPPYV  112 (223)
T ss_pred             CeeEEEECCCCC
Confidence            789999998764

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=93.93  E-value=0.034  Score=42.28  Aligned_cols=37  Identities=22%  Similarity=0.186  Sum_probs=30.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      +|.|.|+ |.+|..+|..|+..|.+  |++.+++++.++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~--V~l~d~~~~~l~~   37 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYE--VTLYDRSPEALER   37 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSE--EEEE-SSHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCc--EEEEECChHHHHh
Confidence            4678888 89999999999999998  9999999876554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=93.91  E-value=0.12  Score=41.92  Aligned_cols=40  Identities=28%  Similarity=0.375  Sum_probs=33.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      ++.+++|+|+++++|..++..+...|..  |+.++++.++.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~--v~~~~~~~~~~~  178 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGAR--VIAAASSEEKLA  178 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCE--EEEEeCCHHHHH
Confidence            4789999999999999999988889987  888887765543

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=93.90  E-value=0.066  Score=43.06  Aligned_cols=43  Identities=16%  Similarity=0.150  Sum_probs=36.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      .+++..++.|.|++|.||..+|+.|+.++..  +.++.|+.+..+
T Consensus       163 idlsqatvaivGa~G~Ia~~Iar~la~~~~~--~~ll~r~aea~~  205 (351)
T COG5322         163 IDLSQATVAIVGATGDIASAIARWLAPKVGV--KELLLRDAEARN  205 (351)
T ss_pred             cCHHHCeEEEecCCchHHHHHHHHhccccCE--EEEecccHHhhh
Confidence            5678899999999999999999999999986  777776655433

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=93.88  E-value=1.2  Score=36.76  Aligned_cols=114  Identities=13%  Similarity=0.111  Sum_probs=64.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcC--CCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+.|.|+ |.+|..++..|+..|....|++++++++..+. ..++....  ....... .  .+.++           +.
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~--~d~~~-----------l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-A--GDYAD-----------CK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-e--CCHHH-----------hC
Confidence            4788898 89999999999999942259999998876542 22222111  1111111 1  12211           24


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      ..|++|.+++...        .+.  .+.   ...    +.....+.+.+.+.+.+....     +.+++++..
T Consensus        67 ~aDiViita~~~~--------~~~--~~r---~dl----~~~n~~i~~~~~~~l~~~~~~-----giiiv~tNP  118 (308)
T cd05292          67 GADVVVITAGANQ--------KPG--ETR---LDL----LKRNVAIFKEIIPQILKYAPD-----AILLVVTNP  118 (308)
T ss_pred             CCCEEEEccCCCC--------CCC--CCH---HHH----HHHHHHHHHHHHHHHHHHCCC-----eEEEEecCc
Confidence            7899999999753        111  111   111    233445556666666554332     477777653

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=93.86  E-value=0.18  Score=41.08  Aligned_cols=40  Identities=30%  Similarity=0.429  Sum_probs=33.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      ++.+++|.|+++++|..++......|++  |+.+++++++.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~--v~~~~~~~~~~~  181 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGAT--VTATTRSPERAA  181 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCE--EEEEeCCHHHHH
Confidence            4789999999999999999888889987  888887765433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=93.79  E-value=0.99  Score=36.31  Aligned_cols=81  Identities=22%  Similarity=0.226  Sum_probs=53.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccc-----------ccchhhcCCCceeEEEecCCCHHHHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATG-----------LLDLKNRFPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~-----------~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      .+.|+|++|.+|+.+++.+.+. +.. .+.+++++++....           +.+.+.    .+. +..|++.++...+.
T Consensus         3 kV~IiG~~G~mG~~i~~~l~~~~~~e-lvav~d~~~~~~~~~~~~~i~~~~dl~~ll~----~~D-vVid~t~p~~~~~~   76 (257)
T PRK00048          3 KVAVAGASGRMGRELIEAVEAAEDLE-LVAAVDRPGSPLVGQGALGVAITDDLEAVLA----DAD-VLIDFTTPEATLEN   76 (257)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCE-EEEEEecCCccccccCCCCccccCCHHHhcc----CCC-EEEECCCHHHHHHH
Confidence            6889999999999999888764 455 34556666543321           111111    122 34688888888877


Q ss_pred             HHHHHHHcCCccEEEECcccc
Q 028056           98 AKSIKEKYGSLNLLINASGIL  118 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~  118 (214)
                      +..+.+.  ..++++-..|..
T Consensus        77 ~~~al~~--G~~vvigttG~s   95 (257)
T PRK00048         77 LEFALEH--GKPLVIGTTGFT   95 (257)
T ss_pred             HHHHHHc--CCCEEEECCCCC
Confidence            7777765  678887665543

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=93.77  E-value=0.25  Score=40.80  Aligned_cols=36  Identities=19%  Similarity=0.182  Sum_probs=31.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      +|.|+| .|-+|.++|..|+++|.+  |++++++++..+
T Consensus         4 ~V~VIG-~G~mG~~iA~~la~~G~~--V~v~d~~~~~~~   39 (308)
T PRK06129          4 SVAIIG-AGLIGRAWAIVFARAGHE--VRLWDADPAAAA   39 (308)
T ss_pred             EEEEEC-ccHHHHHHHHHHHHCCCe--eEEEeCCHHHHH
Confidence            688998 778999999999999997  999999876443

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=93.75  E-value=0.45  Score=39.47  Aligned_cols=35  Identities=29%  Similarity=0.388  Sum_probs=29.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      +|.+++|+|+++++|..++......|++  |+...++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~--v~~~~~~  196 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAH--VTTTCST  196 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEeCc
Confidence            3899999999999999999988888997  6666653

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=93.68  E-value=0.25  Score=40.60  Aligned_cols=40  Identities=20%  Similarity=0.269  Sum_probs=32.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      .+.+++|.|+++++|..++..+...|++  ++++.+++++.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~--v~~~~~~~~~~~  179 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAA--TIITTSSEEKVD  179 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE--EEEEeCCHHHHH
Confidence            4689999999999999999988889987  666777665433

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=93.68  E-value=0.16  Score=45.94  Aligned_cols=39  Identities=15%  Similarity=0.169  Sum_probs=32.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      -.+++.+|+|.|++ |+|..+|+.|+..|.. ++++++.+.
T Consensus       334 ekL~~~kVLIvGaG-GLGs~VA~~La~~GVg-~ItlVD~D~  372 (664)
T TIGR01381       334 ERYSQLKVLLLGAG-TLGCNVARCLIGWGVR-HITFVDNGK  372 (664)
T ss_pred             HHHhcCeEEEECCc-HHHHHHHHHHHHcCCC-eEEEEcCCE
Confidence            45678899999875 7999999999999998 888888654

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=93.64  E-value=0.33  Score=40.26  Aligned_cols=85  Identities=18%  Similarity=0.101  Sum_probs=52.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc------cccchhhcCCCceeEEEecCCCHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT------GLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      ..+.|||+.|.|- |.||+.+|+.+..-|.+  |+..++.....+      .+.+++.  ...++.+.+-++.+.  +.+
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~--V~~~d~~~~~~~~~~~~~~l~ell~--~sDvv~lh~Plt~~T--~~l  213 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAK--VVYYSTSGKNKNEEYERVSLEELLK--TSDIISIHAPLNEKT--KNL  213 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCE--EEEECCCccccccCceeecHHHHhh--cCCEEEEeCCCCchh--hcc
Confidence            4789999999997 68999999999888887  888887542211      1222222  245666666666432  333


Q ss_pred             H-HHHHHHcCCccEEEECc
Q 028056           98 A-KSIKEKYGSLNLLINAS  115 (214)
Q Consensus        98 ~-~~~~~~~~~vd~lv~na  115 (214)
                      + ++..+...+=-++||.+
T Consensus       214 i~~~~~~~Mk~~a~lIN~a  232 (311)
T PRK08410        214 IAYKELKLLKDGAILINVG  232 (311)
T ss_pred             cCHHHHHhCCCCeEEEECC
Confidence            3 33333443334455555

>PLN02928 oxidoreductase family protein

Probab=93.62  E-value=0.27  Score=41.43  Aligned_cols=38  Identities=32%  Similarity=0.333  Sum_probs=33.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..+.||++.|.|- |.||+.+|+.+...|.+  |+.++|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~--V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVK--LLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCE--EEEECCCC
Confidence            4689999999998 78999999999999997  88888863

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=93.59  E-value=0.18  Score=40.85  Aligned_cols=40  Identities=28%  Similarity=0.361  Sum_probs=33.5

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      ++.+++|.|+++++|..++......|++  |+..++++++.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~--v~~~~~~~~~~~  175 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGAT--VIGTVSSEEKAE  175 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE--EEEEcCCHHHHH
Confidence            5789999999999999999988888987  888777665533

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=93.53  E-value=0.19  Score=41.50  Aligned_cols=41  Identities=32%  Similarity=0.370  Sum_probs=34.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      .+.+++|.|+++.+|..++......|++  ++.+++++++.+.
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~--vi~~~~~~~~~~~  202 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAK--VIAVTSSESKAKI  202 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCE--EEEEeCCHHHHHH
Confidence            3789999999999999999988889987  8888887665443

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=93.52  E-value=0.14  Score=42.78  Aligned_cols=40  Identities=20%  Similarity=0.064  Sum_probs=35.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      .++++|++||.|+ |-+|..++++|.++|.. .|+++.|+..
T Consensus       170 ~~l~~k~vLvIGa-Gem~~l~a~~L~~~g~~-~i~v~nRt~~  209 (338)
T PRK00676        170 QKSKKASLLFIGY-SEINRKVAYYLQRQGYS-RITFCSRQQL  209 (338)
T ss_pred             CCccCCEEEEEcc-cHHHHHHHHHHHHcCCC-EEEEEcCCcc
Confidence            3588999999999 89999999999999986 6999999863

>PRK06932 glycerate dehydrogenase; Provisional

Probab=93.52  E-value=0.37  Score=40.02  Aligned_cols=85  Identities=16%  Similarity=0.125  Sum_probs=50.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc-----ccccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-----TGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      ..++||++.|.|- |.||+.+|+.+..-|.+  |+..++.....     ..+.+.+.  ...+..+.+-++..  .+.++
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~--V~~~~~~~~~~~~~~~~~l~ell~--~sDiv~l~~Plt~~--T~~li  215 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMK--VLYAEHKGASVCREGYTPFEEVLK--QADIVTLHCPLTET--TQNLI  215 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCE--EEEECCCcccccccccCCHHHHHH--hCCEEEEcCCCChH--Hhccc
Confidence            4789999999998 68999999999888887  88777653211     01222222  24566666666543  23333


Q ss_pred             -HHHHHHcCCccEEEECc
Q 028056           99 -KSIKEKYGSLNLLINAS  115 (214)
Q Consensus        99 -~~~~~~~~~vd~lv~na  115 (214)
                       ++..++..+=-++||.+
T Consensus       216 ~~~~l~~mk~ga~lIN~a  233 (314)
T PRK06932        216 NAETLALMKPTAFLINTG  233 (314)
T ss_pred             CHHHHHhCCCCeEEEECC
Confidence             33333333334445554

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=93.51  E-value=0.37  Score=40.99  Aligned_cols=55  Identities=16%  Similarity=0.178  Sum_probs=36.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEE
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL   84 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~   84 (214)
                      |++.|.|+||+||.....-+.+...+..|+.++.+. ..+.+.+++.+++.++..+
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~-n~~~l~~q~~~f~p~~v~i   56 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGK-NVELLAEQAREFRPKYVVV   56 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCC-CHHHHHHHHHHhCCCEEEE
Confidence            689999999999999887776653232366554322 2334566666666665554

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=93.51  E-value=0.53  Score=39.70  Aligned_cols=37  Identities=24%  Similarity=0.104  Sum_probs=28.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      .|++++|.|+ |++|..++......|++  |++++.+.++
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~--vi~~~~~~~~  219 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLK--VTVISSSSNK  219 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCcch
Confidence            5789999765 89999998877778886  7777666544

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.50  E-value=0.54  Score=38.36  Aligned_cols=38  Identities=13%  Similarity=-0.012  Sum_probs=32.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      ++|.|.|+ |-+|..+|..|++.|.+  |++.+++++..+.
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~--V~~~d~~~~~~~~   39 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQ--TTLVDIKQEQLES   39 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCc--EEEEeCCHHHHHH
Confidence            46888888 78999999999999998  9999999876554

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.49  E-value=0.19  Score=41.44  Aligned_cols=78  Identities=18%  Similarity=0.158  Sum_probs=44.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ++++++||+|++|..++......|++  |+.+++++++.+.+.+    .+.. .++  |..+.+..++ +.++... ..+
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~--vi~~~~~~~~~~~~~~----~g~~-~~i--~~~~~~~~~~-v~~~~~~-~~~  213 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIK--VINIVRRKEQVDLLKK----IGAE-YVL--NSSDPDFLED-LKELIAK-LNA  213 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHH----cCCc-EEE--ECCCccHHHH-HHHHhCC-CCC
Confidence            44455599999999998766677886  8888887765443322    2322 122  2222222222 2222111 258


Q ss_pred             cEEEECccc
Q 028056          109 NLLINASGI  117 (214)
Q Consensus       109 d~lv~nag~  117 (214)
                      |+++.+.|.
T Consensus       214 d~vid~~g~  222 (324)
T cd08291         214 TIFFDAVGG  222 (324)
T ss_pred             cEEEECCCc
Confidence            999998763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional

Probab=93.47  E-value=1.4  Score=37.94  Aligned_cols=81  Identities=5%  Similarity=-0.018  Sum_probs=51.8

Q ss_pred             cCcEEEEec-CCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC---CceeEEEecCCCHHHHHHHHHHHH
Q 028056           27 KGGVSLVQG-ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        27 ~~k~vlItG-~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ++++||=.| ++|+++.+.+    ..|+. .|+.++.++..++.+.+.....+   .++.++.+|+.+      ...+..
T Consensus       220 ~g~rVLDlfsgtG~~~l~aa----~~ga~-~V~~VD~s~~al~~a~~N~~~Ngl~~~~v~~i~~D~~~------~l~~~~  288 (396)
T PRK15128        220 ENKRVLNCFSYTGGFAVSAL----MGGCS-QVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFK------LLRTYR  288 (396)
T ss_pred             CCCeEEEeccCCCHHHHHHH----hCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCcEEEEEccHHH------HHHHHH
Confidence            567777444 5667665433    35664 69999999987776665555433   367888888742      222332


Q ss_pred             HHcCCccEEEECcccc
Q 028056          103 EKYGSLNLLINASGIL  118 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~  118 (214)
                      +..+++|++|.|+...
T Consensus       289 ~~~~~fDlVilDPP~f  304 (396)
T PRK15128        289 DRGEKFDVIVMDPPKF  304 (396)
T ss_pred             hcCCCCCEEEECCCCC
Confidence            2234799999988654

>TIGR02130 dapB_plant dihydrodipicolinate reductase

Probab=93.44  E-value=1.2  Score=36.15  Aligned_cols=84  Identities=14%  Similarity=0.220  Sum_probs=54.6

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEe--ecCCCCcccccchh----------------hc-CCCceeEEEecCCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIAT--CRNPNGATGLLDLK----------------NR-FPERLDVLQLDLTV   90 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~--~r~~~~~~~~~~~~----------------~~-~~~~~~~~~~Dl~~   90 (214)
                      .|+|.|++|.+|+++++...+.+..  ++..  +.... .+...+..                .. .......+..|+|.
T Consensus         2 ~V~V~Ga~GkMG~~v~~av~~~~~~--Lv~~~~~~~~~-~~~~~~~~g~~v~v~~~~~~~~~l~~~~~~~~d~VvIDFT~   78 (275)
T TIGR02130         2 QIMVNGCPGKMGKAVAEAADAAGLE--IVPTSFGGEEE-AENEAEVAGKEILLHGPSEREARIGEVFAKYPELICIDYTH   78 (275)
T ss_pred             eEEEeCCCChHHHHHHHHHhcCCCE--EEeeEcccccc-ccchhhhcccceeeeccccccccHHHHHhhcCCEEEEECCC
Confidence            5899999999999999998887765  5543  22211 11111110                00 00112336689999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECcccc
Q 028056           91 ESTIEASAKSIKEKYGSLNLLINASGIL  118 (214)
Q Consensus        91 ~~~v~~~~~~~~~~~~~vd~lv~nag~~  118 (214)
                      ++.+.+.++.+.+.  .+..|+-..|..
T Consensus        79 P~~~~~n~~~~~~~--gv~~ViGTTG~~  104 (275)
T TIGR02130        79 PSAVNDNAAFYGKH--GIPFVMGTTGGD  104 (275)
T ss_pred             hHHHHHHHHHHHHC--CCCEEEcCCCCC
Confidence            99999998888765  678888888765

This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	214
1sny_A	267	Carbonyl Reductase Sniffer Of D. Melanogaster Lengt		3e-10
1yo6_A	250	Crystal Structure Of The Putative Carbonyl Reductas		4e-09
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		9e-09
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-07
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		7e-07
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-07
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-06
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-06
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-06
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-06
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-06
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-06
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		1e-05
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		1e-05
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		2e-05
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		5e-05
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		5e-05
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		5e-05
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		8e-05
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		9e-05
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-04
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-04
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		3e-04
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		4e-04
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		4e-04
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		4e-04
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		5e-04
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		6e-04
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		6e-04
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		7e-04
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		7e-04
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		8e-04
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		8e-04
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		8e-04
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		9e-04
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		9e-04

>pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster Length = 267

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 22/193 (11%)
Query: 32  LVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDL-KNRFPERLDVLQLDL- 88
           L+ G +RG+GL   K LL        +  TCRN   A  L DL KN     + +L++DL 
Sbjct: 25  LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNH--SNIHILEIDLR 82
Query: 89  --TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT-LNKVEKSSLMLAYEVN 145
                  + A  + + +  G LN+L N +GI        P++  +  V    L+   + N
Sbjct: 83  NFDAYDKLVADIEGVTKDQG-LNVLFNNAGI-------APKSARITAVRSQELLDTLQTN 134
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDV-----AVVANLSARVGSIGDNRLGGWHSYRASKA 200
            V PI + K   PLLK      E        A + N S+ +GSI  N  GG ++YR SK+
Sbjct: 135 TVVPIXLAKACLPLLKKAAKANESQPXGVGRAAIINXSSILGSIQGNTDGGXYAYRTSKS 194
Query: 201 ALNQC-KILAMDF 212
           ALN   K L++D 
Sbjct: 195 ALNAATKSLSVDL 207

>pdb|1YO6|A Chain A, Crystal Structure Of The Putative Carbonyl Reductase Sniffer Of Caenorhabditis Elegans Length = 250

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 23/198 (11%)
Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
           G  +V GA+RGIGL   +QL++  +   +IAT R+   AT L  +K+    R+ VL L +
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKD---SRVHVLPLTV 60
Query: 89  TVESTIEASAKSIKEKYGS--LNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           T + +++     + E  GS  L+LLIN +G+ LS     +P        ++ +    +VN
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEP-------NRAVIAEQLDVN 113
Query: 146 AVGPILVIKHMSPLL-----KVGGTGIERDVAVVANLSARVGSIGDNRLGGWH----SYR 196
               +L+ + + PLL     K  G  +    A V  +S+ +GSI DN  G       +YR
Sbjct: 114 TTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYR 173
Query: 197 ASKAALNQC-KILAMDFE 213
            SKAA+N   + LA+D +
Sbjct: 174 MSKAAINMFGRTLAVDLK 191

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V LV GAS G G   A+  +   D   VI T R       L DL   +P+R + + LD+T
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGD--TVIGTARRTEA---LDDLVAAYPDRAEAISLDVT 61
Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
               I+  A  +  +YG +++L+N +G   +           +  +  L   +E++  GP
Sbjct: 62  DGERIDVVAADVLARYGRVDVLVNNAGRTQV-------GAFEETTERELRDLFELHVFGP 114
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
             + + + P  +      ER    V N+S+  G +      G+ +Y A+KAAL Q
Sbjct: 115 ARLTRALLPQXR------ERGSGSVVNISSFGGQLS---FAGFSAYSATKAALEQ 160

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +    + L
Sbjct: 11  EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGMAL 65
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N +GI
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNAGI 96

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +    + L
Sbjct: 11  EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGMAL 65
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N +GI
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNAGI 96

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +    + L
Sbjct: 11  EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGMAL 65
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N +GI
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNAGI 96

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 27/182 (14%)
Query: 24  VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV 83
           + ++G ++LV GASRGIG   A+ L  +  K  VI T  + NGA  + D           
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQAISDY---LGANGKG 55
Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLA 141
           L L++T  ++IE+  + I+ ++G +++L+N +GI +  N+L    +   N + +++L   
Sbjct: 56  LMLNVTDPASIESVLEKIRAEFGEVDILVNNAGI-TRDNLLMRMKDEEWNDIIETNLSSV 114
Query: 142 YEVN-AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
           + ++ AV   ++ K    ++ +G                 VG++G+   GG  +Y A+KA
Sbjct: 115 FRLSKAVMRAMMKKRHGRIITIGSV---------------VGTMGN---GGQANYAAAKA 156
Query: 201 AL 202
            L
Sbjct: 157 GL 158

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 24  VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV 83
           + ++G ++LV GASRGIG   A+ L  +  K  VI T  + NGA  + D           
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQAISDY---LGANGKG 55
Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           L L++T  ++IE+  + I+ ++G +++L+N +GI
Sbjct: 56  LMLNVTDPASIESVLEKIRAEFGEVDILVNNAGI 89

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +      L
Sbjct: 8   EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGXAL 62
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N +GI
Sbjct: 63  NVTNPESIEAVLKAITDEFGGVDILVNNAGI 93

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 24  VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV 83
           + ++G ++LV GASRGIG   A+ L  +  K  VI T  + NGA  + D           
Sbjct: 1   MNFEGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQAISDY---LGANGKG 55
Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           L L++T  ++IE+  + I+ ++G +++L+N +GI
Sbjct: 56  LMLNVTDPASIESVLEKIRAEFGEVDILVNNAGI 89

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +    + L
Sbjct: 11  EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGMAL 65
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N + I
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNAAI 96

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV GASRGIG   A+ L E+  K  VI T  + +GA  + D      +    + L
Sbjct: 11  EGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDY---LGDNGKGMAL 65
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++T   +IEA  K+I +++G +++L+N + I
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNADI 96

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERL 81
           S++ + G++++ GAS+GIG   A  L     +  +IA  + N       +   N+  +  
Sbjct: 2   SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEP 61
Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
            VL LD+T  +  +   K I +KYG++++L+NA+      ++ +P     K+        
Sbjct: 62  IVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVDNFRKIX------- 114
Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
            E+N +    ++K ++ + KV   G       + N+++R    G
Sbjct: 115 -EINVIAQYGILKTVTEIXKVQKNG------YIFNVASRAAKYG 151

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 31  SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLT 89
           ++V G ++GIG E  KQL   ++   V+ TCR+   G   +  LKN   E +   QLD+T
Sbjct: 15  AVVTGGNKGIGFEICKQL--SSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVT 72
Query: 90  VE-STIEASAKSIKEKYGSLNLLINASGI 117
              +T+ + A  IK  +G L++L+N +G+
Sbjct: 73  DPIATMSSLADFIKTHFGKLDILVNNAGV 101

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGAT-GLLDLKNRFPERLDVL 84
           +G V+LV G SRG+G   A+ L E    GC V+   RN   A+     L  ++       
Sbjct: 20  RGRVALVTGGSRGLGFGIAQGLAEA---GCSVVVASRNLEEASEAAQKLTEKYGVETMAF 76
Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           + D++    ++   +++KEK+G L+ ++NA+GI    N   P       E   ++   EV
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI----NRRHPAEEFPLDEFRQVI---EV 129
Query: 145 NAVGPILVIKHMSPLLK 161
           N  G   V +    LL+
Sbjct: 130 NLFGTYYVCREAFSLLR 146

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 23/177 (12%)
Query: 26  WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           ++G  ++V G + G GL   ++L+E   +  V+ T RN    + +  ++  F  R+  L+
Sbjct: 6   YQGKKAIVIGGTHGXGLATVRRLVEGGAE--VLLTGRNE---SNIARIREEFGPRVHALR 60
Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D+   + I     +  +  G+++LL   +G+    + L+P    ++V ++S    + VN
Sbjct: 61  SDIADLNEIAVLGAAAGQTLGAIDLLHINAGV----SELEP---FDQVSEASYDRQFAVN 113
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
             G    ++ ++PL++ GG+ +          ++ V   G +   G   Y ASKAAL
Sbjct: 114 TKGAFFTVQRLTPLIREGGSIV---------FTSSVADEGGHP--GXSVYSASKAAL 159

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 23/177 (12%)
Query: 26  WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           ++G  ++V G + G GL   ++L+E   +  V+ T RN    + +  ++  F  R+  L+
Sbjct: 5   YQGKKAIVIGGTHGXGLATVRRLVEGGAE--VLLTGRNE---SNIARIREEFGPRVHALR 59
Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D+   + I     +  +  G+++LL   +G+    + L+P    ++V ++S    + VN
Sbjct: 60  SDIADLNEIAVLGAAAGQTLGAIDLLHINAGV----SELEP---FDQVSEASYDRQFAVN 112
Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
             G    ++ ++PL++ GG+ +          ++ V   G +   G   Y ASKAAL
Sbjct: 113 TKGAFFTVQRLTPLIREGGSIV---------FTSSVADEGGHP--GXSVYSASKAAL 158

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V++V GAS G GL  A + L + D+   +         T      + + +++  ++ D+ 
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHW-HAYADKVLRVRADVA 62
Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            E  + A+  +  E++G++++L+N +GI          TT   VE+   ++A  VN  G 
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTT--PVEQFDKVMA--VNVRGI 118
Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-CKIL 208
            L  + + P + + G G+  ++A VA+L A           G  +Y  SK A+ Q  K +
Sbjct: 119 FLGCRAVLPHMLLQGAGVIVNIASVASLVA---------FPGRSAYTTSKGAVLQLTKSV 169
Query: 209 AMDF 212
           A+D+
Sbjct: 170 AVDY 173

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 19/177 (10%)
Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V LV G SRGIG      L   +    V    R+      L  LK ++ +R   +  D
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS---EAPLKKLKEKYGDRFFYVVGD 58
Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T +S ++    +  + +G ++ L+  +G      VL+P   +N+++ ++    Y++N  
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAG------VLEPVQNVNEIDVNAWKKLYDINFF 112
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
             + ++    P LK        +V  V++ +  +          W +Y +SKAALN 
Sbjct: 113 SIVSLVGIALPELK----KTNGNVVFVSSDACNM------YFSSWGAYGSSKAALNH 159

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 29/171 (16%)
Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           LV G +RGIGL  A+   +  DK  +      P             PE    ++ D+T  
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAITYRSGEP-------------PEGFLAVKCDITDT 71
Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
             +E + K I+E +G + +LI  +G+         +  L ++ +       E N  G   
Sbjct: 72  EQVEQAYKEIEETHGPVEVLIANAGVTK-------DQLLMRMSEEDFTSVVETNLTGTFR 124
Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           V+K  +  +     G       V  +S+ VG +G     G  +Y ASKA L
Sbjct: 125 VVKRANRAMLRAKKG------RVVLISSVVGLLGS---AGQANYAASKAGL 166

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           + LV GA+ G G    ++ +++  K  VIAT R       L +LK+   + L + QLD+ 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHK--VIATGRRQER---LQELKDELGDNLYIAQLDVR 56
Query: 90  VESTIEASAKSIKEKYGSLNLLINASGI---LSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
             + IE    S+  ++ ++++L+N +G+   +   +    E     ++ ++  L Y   A
Sbjct: 57  NRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRA 116
Query: 147 VGPILVIKHMSPLLKVGGT 165
           V P +V ++   ++ +G T
Sbjct: 117 VLPGMVERNHGHIINIGST 135

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 28/177 (15%)
Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLD 87
           G  L+ GASRGIG   A+ L  K  +  ++A  R+      L  +L+   P     L  D
Sbjct: 6   GAVLITGASRGIGEATARLLHAKGYRVGLMA--RDEKRLQALAAELEGALP-----LPGD 58
Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +  E     +  +++E +G L+ L+N +G+     V++P   L  +E+  L+L  + N  
Sbjct: 59  VREEGDWARAVAAMEEAFGELSALVNNAGV----GVMKPVHELT-LEEWRLVL--DTNLT 111
Query: 148 GPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAAL 202
           G  L I+H  P LL+ GG  I             VGS+ G N   G  +Y ASK  L
Sbjct: 112 GAFLGIRHAVPALLRRGGGTI-----------VNVGSLAGKNPFKGGAAYNASKFGL 157

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/181 (17%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 24  VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDV 83
           ++  G  +L+ G++RGIG  FA+  + +  +  +         AT               
Sbjct: 1   MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAA-----EIGPAACA 55
Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
           + LD+T +++I+     + +++GS+++L+N + +  +  +++       + + S    + 
Sbjct: 56  IALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVE-------ITRESYDRLFA 108
Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +N  G + +++ ++  +  GG G       + N++++ G  G+  +G + + +A+  +L 
Sbjct: 109 INVSGTLFMMQAVARAMIAGGRG-----GKIINMASQAGRRGEALVGVYCATKAAVISLT 163
Query: 204 Q 204
           Q
Sbjct: 164 Q 164

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 35/201 (17%)
Query: 18  SSASASVKWKGGVSLVQGASRGIGLEFAKQLLEK------NDKGCVIATCRNPNGATGLL 71
           +S + +V  K  V L+ GA  G+G E+AK   +       ND      T      A G  
Sbjct: 312 ASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGG-- 369
Query: 72  DLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLN 131
                +P++ DV +         EA  K++ +KYG++++L+N +GIL        + +  
Sbjct: 370 ---EAWPDQHDVAK-------DSEAIIKNVIDKYGTIDILVNNAGILR-------DRSFA 412
Query: 132 KVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG 191
           K+ K       +V+ +G   + +   P        +E+    + N+++  G  G+    G
Sbjct: 413 KMSKQEWDSVQQVHLIGTFNLSRLAWPYF------VEKQFGRIINITSTSGIYGNF---G 463
Query: 192 WHSYRASKAA-LNQCKILAMD 211
             +Y +SKA  L   K +A++
Sbjct: 464 QANYSSSKAGILGLSKTMAIE 484

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Query: 26  WKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNP--NGATGLLDLKNRFPERL 81
           + G  + V G + G+G+   +QLL   ++GC   IA  R    + A   L+ +   PE +
Sbjct: 6   FAGRTAFVTGGANGVGIGLVRQLL---NQGCKVAIADIRQDSIDKALATLEAEGSGPEVM 62
Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP 126
            V QLD+      + +A  ++ ++G +++L N +G+    N+ QP
Sbjct: 63  GV-QLDVASREGFKMAADEVEARFGPVSILCNNAGV----NLFQP 102

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 84
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGIL--SIPNVLQPETTLNKVEKSSLMLAYEVNA 146
                IEA   ++ E+YG +++L+N +G L       L  E  L+ V         E N 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVV---------ETNL 135
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
            G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 136 TGVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 170

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 80
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGIL--SIPNVLQPETTLNKVEKSSLMLAYEVNA 146
                IEA   ++ E+YG +++L+N +G L       L  E  L+ V         E N 
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVV---------ETNL 131
Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
            G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 132 TGVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 166

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 17/92 (18%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLD 87
           V +V GAS GIG   A++ +++  K               ++DL    P   + D ++ D
Sbjct: 17  VVIVTGASMGIGRAIAERFVDEGSK---------------VIDLSIHDPGEAKYDHIECD 61
Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILS 119
           +T    ++AS   I ++YGS+++L+N +GI S
Sbjct: 62  VTNPDQVKASIDHIFKEYGSISVLVNNAGIES 93

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 84
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML-AYEVNAV 147
                IEA   ++ E+YG +++L+N +G        +P           L L   E N  
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLT 136
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
           G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 137 GVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 170

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 17/92 (18%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLD 87
           V +V GAS GIG   A++ +++  K               ++DL    P   + D ++ D
Sbjct: 10  VVIVTGASMGIGRAIAERFVDEGSK---------------VIDLSIHDPGEAKYDHIECD 54
Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILS 119
           +T    ++AS   I ++YGS+++L+N +GI S
Sbjct: 55  VTNPDQVKASIDHIFKEYGSISVLVNNAGIES 86

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQL 86
           G V+LV GA++GIG  FA+ LL K  K   +       G      L  +F P++   +Q 
Sbjct: 7   GKVALVTGAAQGIGRAFAEALLLKGAK-VALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 65
Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           D+  +  +  + + + + +G L++L+N +G+
Sbjct: 66  DVADQQQLRDTFRKVVDHFGRLDILVNNAGV 96

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 84
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML-AYEVNAV 147
                IEA   ++ E+YG +++L+N +G        +P           L L   E N  
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLT 136
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
           G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 137 GVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 170

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 80
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML-AYEVNAV 147
                IEA   ++ E+YG +++L+N +G        +P           L L   E N  
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLT 132
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
           G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 133 GVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 166

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 84
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML-AYEVNAV 147
                IEA   ++ E+YG +++L+N +G        +P           L L   E N  
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLT 136
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
           G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 137 GVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 170

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 84
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML-AYEVNAV 147
                IEA   ++ E+YG +++L+N +G        +P           L L   E N  
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLT 136
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
           G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 137 GVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 170

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA+ GIGLE A++L ++  +  V    R   G  T L +L+    E  D    D+
Sbjct: 8   VALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVE-ADGRTCDV 64
Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML-AYEVNAV 147
                IEA   ++ E+YG +++L+N +G        +P           L L   E N  
Sbjct: 65  RSVPEIEALVAAVVERYGPVDVLVNNAG--------RPGGGATAELADELWLDVVETNLT 116
Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG 185
           G   V K    +LK GG  +ER    + N+++  G  G
Sbjct: 117 GVFRVTKQ---VLKAGGM-LERGTGRIVNIASTGGKQG 150

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	214
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-57
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-54
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	6e-24
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-21
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-19
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	3e-19
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	3e-19
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	8e-18
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	3e-16
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	3e-16
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	8e-16
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	6e-15
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	3e-14
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	8e-14
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	8e-14
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-13
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	3e-13
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	5e-13
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	6e-13
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-12
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-12
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	3e-12
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	3e-12
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	3e-12
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	5e-12
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	5e-12
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	5e-12
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	9e-12
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-11
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-11
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-11
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	2e-11
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-11
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	3e-11
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	4e-11
1xq1_A	266	Putative tropinone reducatse; structural genomics,	4e-11
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	4e-11
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	5e-11
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	5e-11
1xkq_A	280	Short-chain reductase family member (5D234); parra	5e-11
4dqx_A	277	Probable oxidoreductase protein; structural genomi	5e-11
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	7e-11
1spx_A	278	Short-chain reductase family member (5L265); paral	7e-11
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	7e-11
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	8e-11
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-10
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-10
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-10
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-10
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-10
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-10
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-10
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-10
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-10
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-10
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	3e-10
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	3e-10
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-10
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	3e-10
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-10
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-10
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	4e-10
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	4e-10
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	4e-10
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	5e-10
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	5e-10
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	5e-10
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	5e-10
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	5e-10
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	6e-10
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-10
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	6e-10
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	6e-10
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	7e-10
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	8e-10
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	8e-10
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-09
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-09
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-09
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-09
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-09
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-09
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-09
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-09
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-09
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-09
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-09
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-09
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-09
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-09
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-09
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	2e-09
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-09
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	3e-09
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	3e-09
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	4e-09
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-09
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	4e-09
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	4e-09
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	4e-09
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	4e-09
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	4e-09
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-09
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	5e-09
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	5e-09
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	5e-09
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	6e-09
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	6e-09
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	6e-09
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	6e-09
3rih_A	293	Short chain dehydrogenase or reductase; structural	7e-09
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	7e-09
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	7e-09
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-09
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	9e-09
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-08
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-08
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-08
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-08
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-08
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-08
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-08
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	3e-08
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-08
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	3e-08
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-08
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	4e-08
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	4e-08
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	4e-08
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	5e-08
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	6e-08
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	6e-08
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	7e-08
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	7e-08
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	8e-08
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	9e-08
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	9e-08
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	9e-08
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-07
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-07
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-07
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	1e-07
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-07
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-07
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-07
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-07
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-07
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-07
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	3e-07
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	3e-07
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-07
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	3e-07
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	4e-07
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	5e-07
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	6e-07
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	6e-07
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	7e-07
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	7e-07
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	8e-07
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-06
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-06
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-06
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-06
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	2e-06
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-06
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	3e-06
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	3e-06
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	6e-06
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-05
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-05
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-05
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-05
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-05
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	5e-05
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	7e-05
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-04
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-04
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	3e-04
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	4e-04
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	6e-04

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  182 bits (463), Expect = 1e-57
 Identities = 57/191 (29%), Positives = 84/191 (43%), Gaps = 16/191 (8%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
           L+ G +RG+GL   K LL        +  TCRN   A  L DL       + +L++DL  
Sbjct: 25  LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHS-NIHILEIDLRN 83

Query: 91  ESTIEASAKSIKEKYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
               +     I+       LN+L N +GI            +  V    L+   + N V 
Sbjct: 84  FDAYDKLVADIEGVTKDQGLNVLFNNAGIA------PKSARITAVRSQELLDTLQTNTVV 137

Query: 149 PILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           PI++ K   PLLK          +    A + N+S+ +GSI  N  GG ++YR SK+ALN
Sbjct: 138 PIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALN 197

Query: 204 QC-KILAMDFE 213
              K L++D  
Sbjct: 198 AATKSLSVDLY 208

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  173 bits (441), Expect = 1e-54
 Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 21/194 (10%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           +V GA+RGIGL   +QL++  +   +IAT R+   AT L  +K+    R+ VL L +T +
Sbjct: 7   VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKD---SRVHVLPLTVTCD 63

Query: 92  STIEASAKSIKEKYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            +++     + E  G   L+LLIN +G+      L    T  +  ++ +    +VN    
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGV------LLSYGTNTEPNRAVIAEQLDVNTTSV 117

Query: 150 ILVIKHMSPLLKVG-----GTGIERDVAVVANLSARVGSIGDNRLGGWH----SYRASKA 200
           +L+ + + PLLK       G  +    A V  +S+ +GSI DN  G       +YR SKA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177

Query: 201 ALNQC-KILAMDFE 213
           A+N   + LA+D +
Sbjct: 178 AINMFGRTLAVDLK 191

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 95.0 bits (237), Expect = 6e-24
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 21/171 (12%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           LV GAS G G   A+  +   D   VI T R       L DL   +P+R + + LD+T  
Sbjct: 9   LVTGASSGFGRAIAEAAVAAGDT--VIGTARRT---EALDDLVAAYPDRAEAISLDVTDG 63

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
             I+  A  +  +YG +++L+N +G   +      ETT  ++        +E++  GP  
Sbjct: 64  ERIDVVAADVLARYGRVDVLVNNAGRTQVGAF--EETTERELRDL-----FELHVFGPAR 116

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           + + + P ++  G+G       V N+S+  G +      G+ +Y A+KAAL
Sbjct: 117 LTRALLPQMRERGSG------SVVNISSFGGQLS---FAGFSAYSATKAAL 158

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 88.2 bits (219), Expect = 2e-21
 Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 22/194 (11%)

Query: 21  SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPE 79
           S+ +     V+LV G ++GIGL   + L      G V+ T R+   G   +  L+     
Sbjct: 1   SSGIH----VALVTGGNKGIGLAIVRDLCRLFS-GDVVLTARDVTRGQAAVQQLQAEGLS 55

Query: 80  RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
                QLD+    +I A    ++++YG L++L+N +GI        P     + E +   
Sbjct: 56  -PRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVA--DPTPFHIQAEVT--- 109

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
              + N  G   V   + PL+K  G    R V    N+S+ +              +   
Sbjct: 110 --MKTNFFGTRDVCTELLPLIKPQG----RVV----NVSSIMSVRALKSCSPELQQKFRS 159

Query: 200 AALNQCKILAMDFE 213
             + + +++ +  +
Sbjct: 160 ETITEEELVGLMNK 173

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 84.0 bits (208), Expect = 1e-19
 Identities = 34/178 (19%), Positives = 70/178 (39%), Gaps = 22/178 (12%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-----LLDLKNRFPERLDVL 84
           + L+ GAS G G   A+ L     +  V A+ R+  G        +          L  L
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHR--VYASMRDIVGRNASNVEAIAGFARDNDVDLRTL 64

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           +LD+  + +++ +   I  + G +++LI+ +G +          T  +  +      Y++
Sbjct: 65  ELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPA--EAFTPEQFAE-----LYDI 117

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N +    V +   P ++    G      ++  +S+   + G         Y A+KAA+
Sbjct: 118 NVLSTQRVNRAALPHMRRQKHG------LLIWISSSSSAGGTPPYLAP--YFAAKAAM 167

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 83.1 bits (205), Expect = 3e-19
 Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 33/220 (15%)

Query: 19  SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRF 77
               +   K   ++V G ++GIG E  KQL        V+ TCR+   G   +  LKN  
Sbjct: 3   ETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIM--VVLTCRDVTKGHEAVEKLKNSN 60

Query: 78  PERLDVLQLDLT-VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
            E +   QLD+T   +T+ + A  IK  +G L++L+N +G+            +      
Sbjct: 61  HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGE 120

Query: 137 SLMLA-----------------------YEVNAVGPILVIKHMSPLLKVGGTGIERDVAV 173
                                        ++N  G   V + + PLL++  +        
Sbjct: 121 DSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSP------R 174

Query: 174 VANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAMDFE 213
           + N+S+  GS+                AL + +I  +   
Sbjct: 175 IVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNM 214

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 81.9 bits (203), Expect = 3e-19
 Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 20/184 (10%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           G V LV G SRGIG      L   +    V    R+      L  LK ++ +R   +  D
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS---EAPLKKLKEKYGDRFFYVVGD 58

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +T +S ++    +  + +G ++ L+  +G+      L+P   +N+++ ++    Y++N  
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGV------LEPVQNVNEIDVNAWKKLYDINFF 112

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-CK 206
             + ++    P LK     +         +S+   ++  +    W +Y +SKAALN    
Sbjct: 113 SIVSLVGIALPELKKTNGNV-------VFVSSDACNMYFS---SWGAYGSSKAALNHFAM 162

Query: 207 ILAM 210
            LA 
Sbjct: 163 TLAN 166

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 79.4 bits (196), Expect = 8e-18
 Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 22/175 (12%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFPERLDVLQLD 87
           L+ G S GIGL  A +L     +   V AT R+      L +        P  L+ LQLD
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLD 65

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV 147
           +    ++ A+ + + E  G +++L+  +G+  +   L+     + V         +VN V
Sbjct: 66  VRDSKSVAAARERVTE--GRVDVLVCNAGL-GLLGPLE-ALGEDAVAS-----VLDVNVV 116

Query: 148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           G + +++   P +K  G+G       V    +  G +G         Y ASK AL
Sbjct: 117 GTVRMLQAFLPDMKRRGSG------RVLVTGSVGGLMG-LPFNDV--YCASKFAL 162

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 73.9 bits (182), Expect = 3e-16
 Identities = 36/187 (19%), Positives = 58/187 (31%), Gaps = 32/187 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
                LV G S  +G E  K    K+     I+     N            P       +
Sbjct: 21  MSKNILVLGGSGALGAEVVKFFKSKSWN--TISIDFREN------------PNADHSFTI 66

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
             + E  I++  + I  K   ++  + A+G  S  N    +  L   +    M+   +N 
Sbjct: 67  KDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASS-DEFL---KSVKGMID--MNL 120

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-C 205
                     + LL  GG        +     A           G  +Y A+KAA +   
Sbjct: 121 YSAFASAHIGAKLLNQGG--------LFVLTGASAALNRT---SGMIAYGATKAATHHII 169

Query: 206 KILAMDF 212
           K LA + 
Sbjct: 170 KDLASEN 176

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 73.9 bits (182), Expect = 3e-16
 Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 21/194 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPE-RLDV 83
              V ++ GASRG G   A QL      G  ++ + R+ +    L + L  + P+ ++ +
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 84  LQLDLTVESTIEASAKSIKEKYG----SLNLLINASGILS-IPNVLQPETTLNKVEKSSL 138
              DL  E+ ++    +++E          LLIN +  L  +         L +V     
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN--- 121

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
              + +N    + +        +    G+ + V  +++L A           GW  Y A 
Sbjct: 122 --YWALNLTSMLCLTSGTLNAFQDSP-GLSKTVVNISSLCALQP------YKGWGLYCAG 172

Query: 199 KAALNQ-CKILAMD 211
           KAA +   ++LA +
Sbjct: 173 KAARDMLYQVLAAE 186

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 72.2 bits (178), Expect = 8e-16
 Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 22/177 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
             G  +V GA  G+G      L+E+  +  V    R       L   +      +  +  
Sbjct: 2   SLGHIIVTGAGSGLGRALTIGLVERGHQ--VSMMGRR---YQRLQQQELLLGNAVIGIVA 56

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           DL     ++ +  +  E  G   L+++ +G      V     T  ++ +   ++  E N 
Sbjct: 57  DLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVG--VYTAEQIRR---VM--ESNL 109

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           V  ILV +    L+   G        V+AN+ +    +G         Y ASK  + 
Sbjct: 110 VSTILVAQQTVRLIGERG-------GVLANVLSSAAQVG---KANESLYCASKWGMR 156

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 70.2 bits (173), Expect = 6e-15
 Identities = 44/198 (22%), Positives = 72/198 (36%), Gaps = 35/198 (17%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFP 78
           KG V LV GA+RGIG      +A         G  V+   R       + D      +  
Sbjct: 13  KGRVILVTGAARGIGAAAARAYAAH-------GASVVLLGRTEASLAEVSDQIKSAGQPQ 65

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKS 136
             +  L L+          A  ++ ++G L+ L++ + I+     L   P+    +V   
Sbjct: 66  PLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQV--- 122

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
                  VN     ++ + + PLLK          ++    S+ VG  G      W +Y 
Sbjct: 123 -----MHVNVNATFMLTRALLPLLKRSEDA-----SIA-FTSSSVGRKGR---ANWGAYG 168

Query: 197 ASKAALNQ-CKILAMDFE 213
            SK A     + LA + E
Sbjct: 169 VSKFATEGLMQTLADELE 186

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 68.4 bits (168), Expect = 3e-14
 Identities = 34/178 (19%), Positives = 71/178 (39%), Gaps = 20/178 (11%)

Query: 26  WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVL 84
             G + L+ GA  GIG   A +  +       +     N +G             ++   
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKL---KSKLVLWDINKHGLEETAAKCKGLGAKVHTF 85

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            +D +    I +SAK +K + G +++L+N +G++   ++    T   ++EK+     +EV
Sbjct: 86  VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLF--ATQDPQIEKT-----FEV 138

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N +      K   P +       + +   +  +++  G +    L    +Y +SK A 
Sbjct: 139 NVLAHFWTTKAFLPAM------TKNNHGHIVTVASAAGHVSVPFLL---AYCSSKFAA 187

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 68.3 bits (167), Expect = 8e-14
 Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 26/195 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLD--- 82
            G    + GASRGIG   A +  +    G  ++   +       LL       E ++   
Sbjct: 44  AGCTVFITGASRGIGKAIALKAAKD---GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG 100

Query: 83  ----VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
                  +D+  E  I A+ +   +K+G +++L+N +  +S+ N L  +T   +++    
Sbjct: 101 GKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTL--DTPTKRLD---- 154

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
            L   VN  G  L  K   P LK            + N+S  +            +Y  +
Sbjct: 155 -LMMNVNTRGTYLASKACIPYLKKSKVA------HILNISPPLNLNP-VWFKQHCAYTIA 206

Query: 199 KAALNQC-KILAMDF 212
           K  ++     +A +F
Sbjct: 207 KYGMSMYVLGMAEEF 221

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 67.3 bits (165), Expect = 8e-14
 Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 31/183 (16%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDV 83
                  +   A  GIGL+ +++L+++N K             T L +LK   P+  +  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENPTALAELKAINPKVNITF 59

Query: 84  LQLDLTVE-STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
              D+TV  +  +   K I ++  ++++LIN +GIL   +  Q E T+            
Sbjct: 60  HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL---DDHQIERTIA----------- 105

Query: 143 EVNAVGPILVIKHMSPLL---KVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
            +N  G +     +       K G  G      ++AN+ +  G            Y ASK
Sbjct: 106 -INFTGLVNTTTAILDFWDKRKGGPGG------IIANICSVTGFNAI---HQVPVYSASK 155

Query: 200 AAL 202
           AA+
Sbjct: 156 AAV 158

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 66.4 bits (163), Expect = 1e-13
 Identities = 43/190 (22%), Positives = 67/190 (35%), Gaps = 38/190 (20%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
                LV G S+GIG    + LL+        VI      + +           E L  +
Sbjct: 3   AMANYLVTGGSKGIGKAVVELLLQ---NKNHTVINIDIQQSFSA----------ENLKFI 49

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYE 143
           + DLT +  I      I  K  S + +   +GIL   ++      ++ KV         +
Sbjct: 50  KADLTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKV--------LD 99

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           +N    I  IK +   LKVG + +           +    I         +Y  SK A+ 
Sbjct: 100 LNVWSSIYFIKGLENNLKVGASIV--------FNGSDQCFIAKP---NSFAYTLSKGAIA 148

Query: 204 QC-KILAMDF 212
           Q  K LA+D 
Sbjct: 149 QMTKSLALDL 158

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 65.6 bits (161), Expect = 3e-13
 Identities = 45/193 (23%), Positives = 71/193 (36%), Gaps = 25/193 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
              + LV GAS GIG E A           VI   RN      +   +      +     
Sbjct: 11  NDRIILVTGASDGIGREAAMTYARYGAT--VILLGRNEEKLRQVASHINEETGRQPQWFI 68

Query: 86  LDLTV--ESTIEASAKSIKEKYGSLNLLINASGIL--SIPNVLQPETTLNKVEKSSLMLA 141
           LDL        +  A+ I   Y  L+ +++ +G+L    P   Q       V        
Sbjct: 69  LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDV-------- 120

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            +VN     ++ + + PLL     G     ++V   S+ VG  G      W +Y ASK A
Sbjct: 121 MQVNVNATFMLTQALLPLLLKSDAG-----SLV-FTSSSVGRQG---RANWGAYAASKFA 171

Query: 202 LNQ-CKILAMDFE 213
                ++LA +++
Sbjct: 172 TEGMMQVLADEYQ 184

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 64.9 bits (159), Expect = 5e-13
 Identities = 39/177 (22%), Positives = 67/177 (37%), Gaps = 26/177 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
                L+ GAS+ +GL  A +LLE    G  VI + R       + +L+         L 
Sbjct: 26  SSAPILITGASQRVGLHCALRLLEH---GHRVIISYRT--EHASVTELR---QAGAVALY 77

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D + E+ I A    +K +  SL  +++ +         +      ++        + V+
Sbjct: 78  GDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRM--------FSVH 129

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            + P L+  H  PLL            +V ++S  V   G        +Y A+KA L
Sbjct: 130 MLAPYLINLHCEPLLTASEVA-----DIV-HISDDVTRKG---SSKHIAYCATKAGL 177

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 64.8 bits (159), Expect = 6e-13
 Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 21/175 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V+LV G +RG+G    + ++ +  K  V+           +        +    + L
Sbjct: 6   TGKVALVSGGARGMGASHVRAMVAEGAK--VVFGDILDEEGKAMAA---ELADAARYVHL 60

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T  +  +A+  +    +G L++L+N +GIL+I  +   +  L + ++  ++   +VN 
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIE--DYALTEWQR--IL---DVNL 113

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            G  L I+ +   +K  G G     +++ N+S+  G  G       H Y A+K A
Sbjct: 114 TGVFLGIRAVVKPMKEAGRG-----SII-NISSIEGLAGTV---ACHGYTATKFA 159

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 63.7 bits (156), Expect = 2e-12
 Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 24/191 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V++V G ++ IGL     L E    G  VI    +   AT  ++        +  + 
Sbjct: 12  DNRVAIVTGGAQNIGLACVTALAE---AGARVIIADLDEAMATKAVEDLRMEGHDVSSVV 68

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
           +D+T   +++ + +S+ E+ G +++L+  +GI  I  V   + T     K          
Sbjct: 69  MDVTNTESVQNAVRSVHEQEGRVDILVACAGI-CISEVKAEDMTDGQWLKQ--------V 119

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           ++N  G     + +  ++     G      V+  + +  G I  NR     +Y ASKA +
Sbjct: 120 DINLNGMFRSCQAVGRIMLEQKQG------VIVAIGSMSGLIV-NRPQQQAAYNASKAGV 172

Query: 203 NQ-CKILAMDF 212
           +Q  + LA ++
Sbjct: 173 HQYIRSLAAEW 183

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 38/184 (20%), Positives = 83/184 (45%), Gaps = 22/184 (11%)

Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL---LDLKNRFPE 79
           S++ + G++++ GAS+GIG   A  L     +  V+   R+      +   +   N+  +
Sbjct: 2   SLEKQKGLAIITGASQGIGAVIAAGLATDGYR--VVLIARSKQNLEKVHDEIMRSNKHVQ 59

Query: 80  RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
              VL LD+T  +  +   K I +KYG++++L+NA+ +    ++ +P     K+      
Sbjct: 60  EPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKI------ 113

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
              E+N +    ++K ++ ++        +    + N+++R    G         Y ++K
Sbjct: 114 --MEINVIAQYGILKTVTEIM------KVQKNGYIFNVASRAAKYG---FADGGIYGSTK 162

Query: 200 AALN 203
            AL 
Sbjct: 163 FALL 166

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 63.0 bits (154), Expect = 3e-12
 Identities = 42/207 (20%), Positives = 79/207 (38%), Gaps = 34/207 (16%)

Query: 9   RSIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT 68
           R         +     +W+  ++LV GAS GIG   A+ L+++  K  V+   R      
Sbjct: 13  RENLYFQGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLK--VVGCART---VG 67

Query: 69  GLLDLKNRFPE-----RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNV 123
            + +L            L   + DL+ E  I +   +I+ ++  +++ IN +G+      
Sbjct: 68  NIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA----- 122

Query: 124 LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVA---VVANLSAR 180
                TL     S     + VN +   +  +     +K      ER+V    ++      
Sbjct: 123 --RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMK------ERNVDDGHIIN----- 169

Query: 181 VGSIGDNR---LGGWHSYRASKAALNQ 204
           + S+  +R   L   H Y A+K A+  
Sbjct: 170 INSMSGHRVLPLSVTHFYSATKYAVTA 196

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 62.9 bits (154), Expect = 3e-12
 Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 25/190 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V+++ G + GIGL  A + +E+  K  V+ T R+ +            P+++   Q 
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAK--VMITGRHSDVGEKAAKSVGT-PDQIQFFQH 61

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
           D + E        + ++ +G ++ L+N +GI    +V   ETT     K+          
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVE--ETTTAEWRKL--------LA 111

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           VN  G     +     +K  G G     A + N+S+  G +GD       +Y ASK A+ 
Sbjct: 112 VNLDGVFFGTRLGIQRMKNKGLG-----ASIINMSSIEGFVGD---PSLGAYNASKGAVR 163

Query: 204 QC-KILAMDF 212
              K  A+D 
Sbjct: 164 IMSKSAALDC 173

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 62.9 bits (154), Expect = 3e-12
 Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 27/178 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G   ++ G +RG+G E A+Q +    +  V+                    +      L
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGAR--VVLADVLDEEGAATAR---ELGDAARYQHL 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
           D+T+E   +      +E++GS++ L+N +GI +   +     ++    KV         E
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLE--TESVERFRKV--------VE 108

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
           +N  G  + +K + P +K  G G     ++V N+S+  G +G        SY ASK  
Sbjct: 109 INLTGVFIGMKTVIPAMKDAGGG-----SIV-NISSAAGLMGLA---LTSSYGASKWG 157

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 62.6 bits (153), Expect = 5e-12
 Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 17/188 (9%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           KG V+ V G+S GIG   A+   +    G  V     +         L+  +       +
Sbjct: 33  KGKVASVTGSSGGIGWAVAEAYAQ---AGADVAIWYNSHPADEKAEHLQKTYGVHSKAYK 89

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            +++   ++E +    ++ +G++++ +  +G+             +   K  ++    V+
Sbjct: 90  CNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNK--II---SVD 144

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
             G      ++  + K  G G       +   S+  G I  N       Y  +KAA    
Sbjct: 145 LNGVYYCSHNIGKIFKKNGKG------SLIITSSISGKIV-NIPQLQAPYNTAKAACTHL 197

Query: 205 CKILAMDF 212
            K LA+++
Sbjct: 198 AKSLAIEW 205

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 62.2 bits (152), Expect = 5e-12
 Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 38/191 (19%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-GLLDLKNRFPERLDVLQ 85
           +  V +V GAS GIG   A++ ++               G+    L + +    + D ++
Sbjct: 7   RDKVVIVTGASMGIGRAIAERFVD--------------EGSKVIDLSIHDPGEAKYDHIE 52

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
            D+T    ++AS   I ++YGS+++L+N +GI S   +     ++    ++         
Sbjct: 53  CDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIE--SMSMGEWRRI--------I 102

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           +VN  G     K   P +           ++V N+S+   SI         +Y  SK A+
Sbjct: 103 DVNLFGYYYASKFAIPYMIRSRDP-----SIV-NISSVQASIIT---KNASAYVTSKHAV 153

Query: 203 NQC-KILAMDF 212
               K +A+D+
Sbjct: 154 IGLTKSIALDY 164

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 62.2 bits (152), Expect = 5e-12
 Identities = 37/195 (18%), Positives = 70/195 (35%), Gaps = 26/195 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLD--- 82
            G    + GASRGIGL  A +       G  V    ++      L    +     ++   
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARD---GANVAIAAKSAVANPKLPGTIHSAAAAVNAAG 61

Query: 83  ----VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
                L+ D+  E  + A+  +  + +G +++L+N +  + +   L  +T + + +   L
Sbjct: 62  GQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTL--DTPMKRFD---L 116

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
           M    VNA G  +  +   P L             +  L+           G    Y  +
Sbjct: 117 MQQ--VNARGSFVCAQACLPHLLQAPNP------HILTLAPPPSLNP-AWWGAHTGYTLA 167

Query: 199 KAALNQC-KILAMDF 212
           K  ++     LA +F
Sbjct: 168 KMGMSLVTLGLAAEF 182

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 61.8 bits (151), Expect = 9e-12
 Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 26/190 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +  V+++ GA  GIGLE ++ L     +  V+          G                +
Sbjct: 10  ENKVAIITGACGGIGLETSRVLARAGAR--VVLADLPETDLAGAAA---SVGRGAVHHVV 64

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
           DLT E ++ A      + +G L+++ N +      ++L  + T+   +          + 
Sbjct: 65  DLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDT--------FT 116

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           VNA G +L+ K+  P L   G G     A+V N+S+              +Y  +KAA+ 
Sbjct: 117 VNARGTMLMCKYAIPRLISAGGG-----AIV-NISSATAHAAY---DMSTAYACTKAAIE 167

Query: 204 QC-KILAMDF 212
              + +A  +
Sbjct: 168 TLTRYVATQY 177

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 61.4 bits (150), Expect = 1e-11
 Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 23/176 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G  ++V G + G+GL   ++L+E   +  V+ T RN    + +  ++  F  R+  L+ 
Sbjct: 7   QGKKAIVIGGTHGMGLATVRRLVEGGAE--VLLTGRN---ESNIARIREEFGPRVHALRS 61

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+   + I     +  +  G+++LL   +G+  +          ++V ++S    + VN 
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSEL-------EPFDQVSEASYDRQFAVNT 114

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            G    ++ ++PL++ GG       ++V   S+     G     G   Y ASKAAL
Sbjct: 115 KGAFFTVQRLTPLIREGG-------SIV-FTSSVADEGG---HPGMSVYSASKAAL 159

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 60.8 bits (148), Expect = 1e-11
 Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 20/191 (10%)

Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
           S+  +     V GA   IG E AK+   +     V A  RN      L+        R+ 
Sbjct: 2   SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFT--VFAGRRNGEKLAPLVAEIEAAGGRIV 59

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
              LD   E  + A   +  + +  L + I   G      +L  ETT     K      +
Sbjct: 60  ARSLDARNEDEVTAFLNAA-DAHAPLEVTIFNVGANVNFPIL--ETTDRVFRK-----VW 111

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           E+      +  +  + L+   G G       +    A     G     G+ ++ ++K  L
Sbjct: 112 EMACWAGFVSGRESARLMLAHGQG------KIFFTGATASLRG---GSGFAAFASAKFGL 162

Query: 203 NQ-CKILAMDF 212
               + +A + 
Sbjct: 163 RAVAQSMAREL 173

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 61.0 bits (149), Expect = 1e-11
 Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 26/188 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
              ++++ GA+ GIGL  AK+ + +  +  V  T R       L             +Q 
Sbjct: 28  NAKIAVITGATSGIGLAAAKRFVAEGAR--VFITGRR---KDVLDAAIAEIGGGAVGIQA 82

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
           D    + ++   + +K + G +++L   +G  S+  + +  E   +          ++ N
Sbjct: 83  DSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDT--------FDRN 134

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
             G +  ++   PLL  G        +VV    +  GS G      +  Y ASKAAL   
Sbjct: 135 VKGVLFTVQKALPLLARGS-------SVV-LTGSTAGSTG---TPAFSVYAASKAALRSF 183

Query: 205 CKILAMDF 212
            +   +D 
Sbjct: 184 ARNWILDL 191

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 61.0 bits (149), Expect = 2e-11
 Identities = 39/190 (20%), Positives = 77/190 (40%), Gaps = 35/190 (18%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
              V++V G S GIGL     L+    K  V++   +                  D  ++
Sbjct: 13  TDKVAIVTGGSSGIGLAVVDALVRYGAK--VVSVSLDEKSDV----------NVSDHFKI 60

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
           D+T E  ++ + +   +KYG +++L+N +GI     +    T      ++         +
Sbjct: 61  DVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLH--LTPTEIWRRI--------ID 110

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           VN  G  L+ K+  P++   G G     +++ N+++              +Y  SK AL 
Sbjct: 111 VNVNGSYLMAKYTIPVMLAIGHG-----SII-NIASVQSYAAT---KNAAAYVTSKHALL 161

Query: 204 QC-KILAMDF 212
              + +A+D+
Sbjct: 162 GLTRSVAIDY 171

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 60.7 bits (148), Expect = 2e-11
 Identities = 38/180 (21%), Positives = 67/180 (37%), Gaps = 22/180 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
           +G   +V GAS+GIG E A  L +    G  V+ T R+      ++             +
Sbjct: 27  QGKKVIVTGASKGIGREMAYHLAKM---GAHVVVTARSKETLQKVVSHCLELGAASAHYI 83

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
              +   +  E       +  G L++LI      +  N+      ++ V K   M   EV
Sbjct: 84  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLF--HDDIHHVRK--SM---EV 136

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N +  +++     P+LK            +  +S+  G +    +     Y ASK AL+ 
Sbjct: 137 NFLSYVVLTVAALPMLKQSN-------GSIVVVSSLAGKVAYPMVAA---YSASKFALDG 186

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 60.4 bits (147), Expect = 3e-11
 Identities = 32/195 (16%), Positives = 68/195 (34%), Gaps = 27/195 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLD--- 82
           +G    + G SRGIGL  AK++      G  V    ++      L        + ++   
Sbjct: 8   RGKTMFISGGSRGIGLAIAKRVAAD---GANVALVAKSAEPHPKLPGTIYTAAKEIEEAG 64

Query: 83  ----VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
                +  D+     + A+     E++G +++ +N +  +++ ++   E  L + +   L
Sbjct: 65  GQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIE--EVPLKRFD---L 119

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
           M    +   G   V +   P +K            +  LS  +             Y  +
Sbjct: 120 MNG--IQVRGTYAVSQSCIPHMKGRDNP------HILTLSPPIRLEPKWL--RPTPYMMA 169

Query: 199 KAALNQC-KILAMDF 212
           K  +  C   +A + 
Sbjct: 170 KYGMTLCALGIAEEL 184

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 59.8 bits (146), Expect = 4e-11
 Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 24/201 (11%)

Query: 17  TSSASASVKW--KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDL 73
             + +   +W  KG  +LV G S+GIG    ++L      G  + TC RN       L++
Sbjct: 8   MMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAG---LGARVYTCSRNEKELDECLEI 64

Query: 74  KNRFPERLDVLQLDLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNK 132
                  ++    DL   +  +   +++   + G LN+L+N +G+     + +      +
Sbjct: 65  WREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGV----VIHKEAKDFTE 120

Query: 133 VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW 192
            + + +M     N      + +   PLLK    G       V  LS+  G      L   
Sbjct: 121 KDYNIIM---GTNFEAAYHLSQIAYPLLKASQNG------NVIFLSSIAGFSA---LPSV 168

Query: 193 HSYRASKAALNQ-CKILAMDF 212
             Y ASK A+NQ  K LA ++
Sbjct: 169 SLYSASKGAINQMTKSLACEW 189

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 59.8 bits (146), Expect = 4e-11
 Identities = 44/191 (23%), Positives = 71/191 (37%), Gaps = 23/191 (12%)

Query: 18  SSASASVKW--KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLK 74
           + A  S +W  K    LV G ++GIG    ++       G VI TC RN       L   
Sbjct: 2   AGAEQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAG---FGAVIHTCARNEYELNECLSKW 58

Query: 75  NRFPERLDVLQLDLTVESTIEASAKSIKEKYG-SLNLLINASGILSIPNVLQPETTLNKV 133
            +   ++     D ++    E   +++   +G  L++LIN  G        +P       
Sbjct: 59  QKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGA----IRSKPTLDYTAE 114

Query: 134 EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH 193
           + S  +     N      + +   PLLK  G G       +  +S+  G +         
Sbjct: 115 DFSFHI---STNLESAYHLSQLAHPLLKASGCG------NIIFMSSIAGVVS---ASVGS 162

Query: 194 SYRASKAALNQ 204
            Y A+K ALNQ
Sbjct: 163 IYSATKGALNQ 173

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 59.8 bits (146), Expect = 4e-11
 Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 28/178 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G V+LV G + G+GLE  K LL +  K  V  +  N      L        ER   ++ 
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAK--VAFSDINEAAGQQLAA---ELGERSMFVRH 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAYE 143
           D++ E+       +++ + G+LN+L+N +GIL   ++      L   +++         +
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDME--TGRLEDFSRL--------LK 109

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
           +N     +  +     +K  G G     +++ N+++    +       +  Y ASKAA
Sbjct: 110 INTESVFIGCQQGIAAMKETG-G-----SII-NMASVSSWLPI---EQYAGYSASKAA 157

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 59.9 bits (146), Expect = 5e-11
 Identities = 35/192 (18%), Positives = 71/192 (36%), Gaps = 25/192 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL---LDLKNRFPERLDV 83
           +    LV G   GIG   A  L+       V+   RNP+   G    L+        +  
Sbjct: 10  QDRTYLVTGGGSGIGKGVAAGLVAAGAS--VMIVGRNPDKLAGAVQELEALGANGGAIRY 67

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLA 141
              D+T E     +  ++   +G L+ +++ +G       +         +         
Sbjct: 68  EPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRT-------- 119

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            ++N  G + V+KH +  +  GG G     + V  +S+   S        + +Y  +K+A
Sbjct: 120 VDLNVNGTMYVLKHAAREMVRGGGG-----SFV-GISSIAASNTH---RWFGAYGVTKSA 170

Query: 202 LNQ-CKILAMDF 212
           ++   ++ A + 
Sbjct: 171 VDHLMQLAADEL 182

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 59.5 bits (145), Expect = 5e-11
 Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 26/189 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G V++V GA  GIGL  A++L ++   GC V+    + + A        +        +
Sbjct: 28  AGKVAIVTGAGAGIGLAVARRLADE---GCHVLCADIDGDAADAAAT---KIGCGAAACR 81

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL-QPETTLNKVEKSSLMLAYEV 144
           +D++ E  I A   +    +G ++ L+  +G++ + +++       ++V          +
Sbjct: 82  VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRV--------IAI 133

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N  G  L  KH +P +   G G     A+V NLS+  G +     GG  +Y  SKA + Q
Sbjct: 134 NLRGAWLCTKHAAPRMIERGGG-----AIV-NLSSLAGQVAV---GGTGAYGMSKAGIIQ 184

Query: 205 -CKILAMDF 212
             +I A + 
Sbjct: 185 LSRITAAEL 193

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 59.5 bits (145), Expect = 5e-11
 Identities = 37/195 (18%), Positives = 72/195 (36%), Gaps = 28/195 (14%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFP 78
                ++ G+S GIG    + FA++       G  V  T R+         +        
Sbjct: 5   SNKTVIITGSSNGIGRTTAILFAQE-------GANVTITGRSSERLEETRQIILKSGVSE 57

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
           ++++ +  D+T E   +    S  +++G +++L+N +G           T          
Sbjct: 58  KQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKT 117

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
           +   ++N    I + K + P L      I        N+S+ V          +  Y  +
Sbjct: 118 L---KLNLQAVIEMTKKVKPHLVASKGEI-------VNVSSIVAGPQAQP--DFLYYAIA 165

Query: 199 KAALNQ-CKILAMDF 212
           KAAL+Q  +  A+D 
Sbjct: 166 KAALDQYTRSTAIDL 180

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 59.5 bits (145), Expect = 5e-11
 Identities = 39/188 (20%), Positives = 81/188 (43%), Gaps = 24/188 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
              V +V G   GIG   A+   +      V+    N + A  + +       +   +++
Sbjct: 26  NQRVCIVTGGGSGIGRATAELFAKNGAY--VVVADVNEDAAVRVAN---EIGSKAFGVRV 80

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
           D++     E+  +    K+G +++L+N +G  +  NV+  PE T +++          VN
Sbjct: 81  DVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRI--------MSVN 132

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
             G  L  K++ P+++  G G     +++ N ++   +          +Y ASK A++  
Sbjct: 133 VKGIFLCSKYVIPVMRRNGGG-----SII-NTTSYTATSAI---ADRTAYVASKGAISSL 183

Query: 205 CKILAMDF 212
            + +AMD 
Sbjct: 184 TRAMAMDH 191

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 59.1 bits (144), Expect = 7e-11
 Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 22/179 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLD-LKNRFP-ERLDV 83
              V++V G S GIGL   + LLE    G  +A C R+          L+ RFP  RL  
Sbjct: 7   SEAVAVVTGGSSGIGLATVELLLE---AGAAVAFCARDGERLRAAESALRQRFPGARLFA 63

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
              D+     + A A++ +   G  ++L+N +G           +T  +    +     +
Sbjct: 64  SVCDVLDALQVRAFAEACERTLGCASILVNNAGQ-------GRVSTFAETTDEAWSEELQ 116

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           +     I  ++   P L+          A+V  +++ + S  +       +  A++A +
Sbjct: 117 LKFFSVIHPVRAFLPQLESRADA-----AIV-CVNSLLASQPE---PHMVATSAARAGV 166

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 59.1 bits (144), Expect = 7e-11
 Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 20/191 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFPERLD 82
              V+++ G+S GIG   A     +   G  V  T R+                  + ++
Sbjct: 5   AEKVAIITGSSNGIGRATAVLFARE---GAKVTITGRHAERLEETRQQILAAGVSEQNVN 61

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
            +  D+T ++  +    +   K+G L++L+N +G     +      T       S     
Sbjct: 62  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQ---SKTGTAQSIESYDATL 118

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            +N    I + K   P L      I        N+S+    +       +  Y  +KAA+
Sbjct: 119 NLNLRSVIALTKKAVPHLSSTKGEI-------VNISSIASGLHATP--DFPYYSIAKAAI 169

Query: 203 NQ-CKILAMDF 212
           +Q  +  A+D 
Sbjct: 170 DQYTRNTAIDL 180

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 59.1 bits (144), Expect = 7e-11
 Identities = 38/184 (20%), Positives = 61/184 (33%), Gaps = 26/184 (14%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPER 80
           KG   L+ G+S+GIG      FA+        G    +   + P      +         
Sbjct: 6   KGKRVLITGSSQGIGLATARLFARA-------GAKVGLHGRKAPANIDETIASMRADGGD 58

Query: 81  LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ--PETTLNKVEKSSL 138
                 DL      +        K+G +++LIN +G L     L    +T  + V     
Sbjct: 59  AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAV----- 113

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
               + N    ++  K   P L        +  AV+ +  +  G  G     G   Y A+
Sbjct: 114 ---MDANIRSVVMTTKFALPHLAAAAKASGQTSAVI-STGSIAGHTGGG--PGAGLYGAA 167

Query: 199 KAAL 202
           KA L
Sbjct: 168 KAFL 171

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 58.7 bits (143), Expect = 8e-11
 Identities = 43/191 (22%), Positives = 70/191 (36%), Gaps = 33/191 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G   LV G +RGIG   A+    +   G  V      P G      +   F       Q
Sbjct: 5   AGKGVLVTGGARGIGRAIAQAFARE---GALVALCDLRPEGKEVAEAIGGAF------FQ 55

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
           +DL  E       +      G +++L+N + I +  + L     L    +V         
Sbjct: 56  VDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSAL--TVRLPEWRRV--------L 105

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           EVN   P+ +    +  ++  G G     A+V N+++  G   +       +Y ASK  L
Sbjct: 106 EVNLTAPMHLSALAAREMRKVGGG-----AIV-NVASVQGLFAE---QENAAYNASKGGL 156

Query: 203 NQ-CKILAMDF 212
               + LA+D 
Sbjct: 157 VNLTRSLALDL 167

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 58.0 bits (141), Expect = 1e-10
 Identities = 38/178 (21%), Positives = 68/178 (38%), Gaps = 25/178 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--KNRFPERLDVL 84
            G V+LV GA++GIG  FA+ LL K  K  V     N            +   P++   +
Sbjct: 6   NGKVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALHEQFEPQKTLFI 63

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           Q D+  +  +  + + + + +G L++L+N +G+         E    K          ++
Sbjct: 64  QCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV-------NNEKNWEKT--------LQI 108

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N V  I         +     G      ++ N+S+  G +          Y ASK  +
Sbjct: 109 NLVSVISGTYLGLDYMSKQNGG--EGGIII-NMSSLAGLMPV---AQQPVYCASKHGI 160

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 58.3 bits (142), Expect = 2e-10
 Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 28/193 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  +L+ GAS GIG + A    E    G  V    R+ +    + D       +   ++
Sbjct: 31  SGKRALITGASTGIGKKVALAYAE---AGAQVAVAARHSDALQVVADEIAGVGGKALPIR 87

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEV 144
            D+T    +      +  + G +++ +  +GI      +  P     ++         + 
Sbjct: 88  CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRI--------QDT 139

Query: 145 NAVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
           N  G  L      + M   +  G  G      ++   ++  G I  N       Y  SKA
Sbjct: 140 NVTGVFLTAQAAARAM---VDQGLGG-----TII-TTASMSGHII-NIPQQVSHYCTSKA 189

Query: 201 ALNQ-CKILAMDF 212
           A+    K +A++ 
Sbjct: 190 AVVHLTKAMAVEL 202

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 31/197 (15%)

Query: 21  SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPE 79
           +   ++ G V +V G  RGIG    +  +    +  V+   ++ +G   L   L      
Sbjct: 2   ATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGAR--VVICDKDESGGRALEQELPGAVFI 59

Query: 80  RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKS 136
             DV     T E  ++        ++G L+ ++N +G    P   + ET+     ++   
Sbjct: 60  LCDV-----TQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPE-ETSAQGFRQL--- 110

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
                 E+N +G   + K   P L+    G      V+ N+S+ VG+IG         Y 
Sbjct: 111 -----LELNLLGTYTLTKLALPYLRKSQ-G-----NVI-NISSLVGAIGQ---AQAVPYV 155

Query: 197 ASKAALNQC-KILAMDF 212
           A+K A+    K LA+D 
Sbjct: 156 ATKGAVTAMTKALALDE 172

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 39/197 (19%), Positives = 78/197 (39%), Gaps = 23/197 (11%)

Query: 20  ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE 79
              S+  +G V+L+ GA  G G   AK+  +   K  V+   R+  GA  +        +
Sbjct: 1   GPGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAK--VVIVDRDKAGAERVAG---EIGD 55

Query: 80  RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKS 136
               +  D++ E+ ++A+ ++   K+G +++L+N +GI                +++   
Sbjct: 56  AALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGI-GHKPQNAELVEPEEFDRI--- 111

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
                  VN  G  L+   + P  K  G   +  V +  N+++               Y 
Sbjct: 112 -----VGVNVRGVYLMTSKLIPHFKENGAKGQECVIL--NVASTGAGRPR---PNLAWYN 161

Query: 197 ASKAALNQ-CKILAMDF 212
           A+K  +    K LA++ 
Sbjct: 162 ATKGWVVSVTKALAIEL 178

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 42/207 (20%), Positives = 85/207 (41%), Gaps = 21/207 (10%)

Query: 19  SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKN 75
           + ++    +   +++ G +R IG   A +L +   +G   V+    +   A  L+  L  
Sbjct: 2   NETSHEASECPAAVITGGARRIGHSIAVRLHQ---QGFRVVVHYRHSEGAAQRLVAELNA 58

Query: 76  RFPERLDVLQLDLTVESTIEASAKSI----KEKYGSLNLLINASGILSIPNVLQPETTLN 131
                  + + DL++ S++    + I       +G  ++L+N +     P  L P    N
Sbjct: 59  ARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAY-YPTPLLPGDDTN 117

Query: 132 KVEKSSLMLA-----YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD 186
               +  + A     +  NAV P+ +I+  +     GG    R+++VV NL   +  +  
Sbjct: 118 GAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV-NLCDAMTDLP- 175

Query: 187 NRLGGWHSYRASKAALNQC-KILAMDF 212
             L G+  Y  +K AL    +  A++ 
Sbjct: 176 --LPGFCVYTMAKHALGGLTRAAALEL 200

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 42/188 (22%), Positives = 67/188 (35%), Gaps = 29/188 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V ++  A++GIG   A     +  K  VIAT  N +    L          LDV   
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAK--VIATDINESKLQELEKYPGIQTRVLDV--- 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVN 145
                 T +        +   L++L N +G +    VL   E   +            +N
Sbjct: 60  ------TKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFS--------MNLN 105

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQC 205
                L+IK   P +    +G      ++ N+S+   S+          Y  +KAA+   
Sbjct: 106 VRSMYLMIKAFLPKMLAQKSG-----NII-NMSSVASSVKGVV--NRCVYSTTKAAVIGL 157

Query: 206 -KILAMDF 212
            K +A DF
Sbjct: 158 TKSVAADF 165

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 43/188 (22%), Positives = 74/188 (39%), Gaps = 22/188 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQ 85
           +G  +LV G SRGIG    ++L      G  + TC RN       L        +++   
Sbjct: 8   EGCTALVTGGSRGIGYGIVEELAS---LGASVYTCSRNQKELNDCLTQWRSKGFKVEASV 64

Query: 86  LDLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            DL+  S  +    ++   + G LN+L+N +GI     + +        + S +M    +
Sbjct: 65  CDLSSRSERQELMNTVANHFHGKLNILVNNAGI----VIYKEAKDYTVEDYSLIM---SI 117

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N      +     P LK    G       V  +S+  G++          Y A+K A++Q
Sbjct: 118 NFEAAYHLSVLAHPFLKASERG------NVVFISSVSGALAVPYEA---VYGATKGAMDQ 168

Query: 205 -CKILAMD 211
             + LA +
Sbjct: 169 LTRCLAFE 176

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 42/196 (21%), Positives = 78/196 (39%), Gaps = 32/196 (16%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC-VIATCRNPNGATGLLDL---KNRFP 78
            G   ++ G+S GIG    + FAK+       G  V  T RN +                
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKE-------GAQVTITGRNEDRLEETKQQILKAGVPA 77

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
           E+++ +  D+T  S  +    +   K+G +++L+N +G          +  +   +K   
Sbjct: 78  EKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQK--T 135

Query: 139 MLAYEVNAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRA 197
               ++N    I + +     L+K  G        +V N+S+ V     +   G+  Y  
Sbjct: 136 F---KLNFQAVIEMTQKTKEHLIKTKG-------EIV-NVSSIVAGPQAHS--GYPYYAC 182

Query: 198 SKAALNQ-CKILAMDF 212
           +KAAL+Q  +  A+D 
Sbjct: 183 AKAALDQYTRCTAIDL 198

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 57.5 bits (140), Expect = 2e-10
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V+LV GASRGIG E A  L  K   G  V+ T  +   A    +       +   L 
Sbjct: 4   NEKVALVTGASRGIGFEVAHALASK---GATVVGTATSQASAEKFENSMKEKGFKARGLV 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           L+++   +I+     IK +  ++++L+N +GI
Sbjct: 61  LNISDIESIQNFFAEIKAENLAIDILVNNAGI 92

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 57.6 bits (140), Expect = 2e-10
 Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 32/181 (17%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           + LV GA+ G G    ++ +++  K  VIAT R       L +LK+   + L + QLD+ 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHK--VIATGRR---QERLQELKDELGDNLYIAQLDVR 56

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL-----MLAYEV 144
             + IE    S+  ++ ++++L+N +G L++         +    K+S+     M   + 
Sbjct: 57  NRAAIEEMLASLPAEWCNIDILVNNAG-LALG--------MEPAHKASVEDWETM--IDT 105

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALN 203
           N  G + + + + P +      +ER+   + N    +GS  G     G + Y A+KA + 
Sbjct: 106 NNKGLVYMTRAVLPGM------VERNHGHIIN----IGSTAGSWPYAGGNVYGATKAFVR 155

Query: 204 Q 204
           Q
Sbjct: 156 Q 156

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 57.6 bits (140), Expect = 3e-10
 Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 23/189 (12%)

Query: 17  TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--K 74
           T+++S + ++   V L+ G   G+G   A +L  +  K  +     +  G         +
Sbjct: 2   TATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAK--LSLVDVSSEGLEASKAAVLE 59

Query: 75  NRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNK 132
                 +     D++ E+ +EA   +  E++G ++   N +GI    N          +K
Sbjct: 60  TAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDK 119

Query: 133 VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW 192
           V          +N  G  L ++ +  +++  G+G      VV N ++  G  G   +G  
Sbjct: 120 V--------VSINLRGVFLGLEKVLKIMREQGSG-----MVV-NTASVGGIRG---IGNQ 162

Query: 193 HSYRASKAA 201
             Y A+K  
Sbjct: 163 SGYAAAKHG 171

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 57.2 bits (139), Expect = 3e-10
 Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 20/176 (11%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQLDL 88
           V+++ GASRGIG   A+ L        +    R+ +    +   L       +    LD+
Sbjct: 4   VAVITGASRGIGEAIARALARDGYA--LALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
           +   ++E  +K + E++G +++++  +G+       +    L   E+   M   EVN +G
Sbjct: 62  SKAESVEEFSKKVLERFGDVDVVVANAGL----GYFKRLEEL-SEEEFHEM--IEVNLLG 114

Query: 149 PILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
               +K     LK  G         +   S     +    +     Y ++K A   
Sbjct: 115 VWRTLKAFLDSLKRTGGLA------LVTTS----DVSARLIPYGGGYVSTKWAARA 160

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 57.2 bits (139), Expect = 3e-10
 Identities = 37/181 (20%), Positives = 70/181 (38%), Gaps = 36/181 (19%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K  +++V GA+ G+G+E  K L        V A  RNP     L ++     E ++ ++ 
Sbjct: 4   KKKIAVVTGATGGMGIEIVKDLSR---DHIVYALGRNPEHLAALAEI-----EGVEPIES 55

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL-----MLA 141
           D+  E   E     +K     ++ L++A+ +               +E  S+        
Sbjct: 56  DIVKEVLEEGGVDKLKN-LDHVDTLVHAAAV----------ARDTTIEAGSVAEWHAH-- 102

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            ++N + P  + + + P L+            V  +++  G+       G   Y ASK A
Sbjct: 103 LDLNVIVPAELSRQLLPALRAAS-------GCVIYINSGAGNGPH---PGNTIYAASKHA 152

Query: 202 L 202
           L
Sbjct: 153 L 153

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 57.2 bits (139), Expect = 3e-10
 Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 24/179 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
             G  L+ GASRGIG   A+ L  K  +  V    R+      L  L       L  L  
Sbjct: 4   MKGAVLITGASRGIGEATARLLHAKGYR--VGLMARD---EKRLQALAAELEGAL-PLPG 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+  E     +  +++E +G L+ L+N +G+     V++P   L  +E+  L+   + N 
Sbjct: 58  DVREEGDWARAVAAMEEAFGELSALVNNAGVG----VMKPVHEL-TLEEWRLV--LDTNL 110

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALNQ 204
            G  L I+H  P L      + R    + N    VGS+ G N   G  +Y ASK  L  
Sbjct: 111 TGAFLGIRHAVPAL------LRRGGGTIVN----VGSLAGKNPFKGGAAYNASKFGLLG 159

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 57.1 bits (139), Expect = 3e-10
 Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 24/190 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +  V+LV  ++ GIGL  A++L +    G  V+ + R        +         +    
Sbjct: 13  ENKVALVTASTDGIGLAIARRLAQ---DGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 69

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYE 143
             +      E         +G +++L++ + +      +    E   +K+          
Sbjct: 70  CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKI--------LH 121

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           VN    +L+ K + P ++  G G       V  +S+         LG    Y  SK AL 
Sbjct: 122 VNVKATVLMTKAVVPEMEKRGGG------SVLIVSSVGAYHPFPNLG---PYNVSKTALL 172

Query: 204 Q-CKILAMDF 212
              K LA++ 
Sbjct: 173 GLTKNLAVEL 182

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 57.2 bits (139), Expect = 3e-10
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +  V+LV GA RGIG E AK L +       VI   R       ++D    F        
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKS---VSHVICISRTQKSCDSVVDEIKSFGYESSGYA 99

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D++ +  I      I  ++ ++++L+N +GI
Sbjct: 100 GDVSKKEEISEVINKILTEHKNVDILVNNAGI 131

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 57.3 bits (139), Expect = 4e-10
 Identities = 38/187 (20%), Positives = 62/187 (33%), Gaps = 18/187 (9%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
           +   ++V GA++ IG   A +L +    G   VI    +   A  L D L         V
Sbjct: 22  EAPAAVVTGAAKRIGRAIAVKLHQ---TGYRVVIHYHNSAEAAVSLADELNKERSNTAVV 78

Query: 84  LQLDLTVESTIEASA----KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
            Q DLT  + + AS      S    +G  ++L+N +     P  L      +     ++ 
Sbjct: 79  CQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASA-FYPTPLVQGDHEDNSNGKTVE 137

Query: 140 LAYE----VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSY 195
                    NA+ P L+    +   K            + NL   +          +  Y
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP---CMAFSLY 194

Query: 196 RASKAAL 202
              K AL
Sbjct: 195 NMGKHAL 201

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 56.8 bits (138), Expect = 4e-10
 Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 5/91 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G  +LV GA+ GIG   A+    +     V       +      ++     + + V   
Sbjct: 26  TGRKALVTGATGGIGEAIARCFHAQGAI--VGLHGTREDKLK---EIAADLGKDVFVFSA 80

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +L+   +I+  A+  + +   +++L+N +GI
Sbjct: 81  NLSDRKSIKQLAEVAEREMEGIDILVNNAGI 111

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 56.7 bits (138), Expect = 4e-10
 Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 27/192 (14%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLKNRFPERLDVLQL 86
             V++V GAS G GL  A + L + D+  V A   +            + + +++  ++ 
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDR--VAALDLSAETLEETARTHWHAYADKVLRVRA 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP--ETTL---NKVEKSSLMLA 141
           D+  E  + A+  +  E++G++++L+N +GI +  +       T +   +KV        
Sbjct: 60  DVADEGDVNAAIAATMEQFGAIDVLVNNAGI-TGNSEAGVLHTTPVEQFDKV-------- 110

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
             VN  G  L  + + P + + G G      +V N+++    +      G  +Y  SK A
Sbjct: 111 MAVNVRGIFLGCRAVLPHMLLQGAG-----VIV-NIASVASLVAF---PGRSAYTTSKGA 161

Query: 202 LNQC-KILAMDF 212
           + Q  K +A+D+
Sbjct: 162 VLQLTKSVAVDY 173

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 56.8 bits (138), Expect = 5e-10
 Identities = 43/199 (21%), Positives = 75/199 (37%), Gaps = 23/199 (11%)

Query: 17  TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLK 74
           +  + AS    G V+L  GA RGIG   A +L     +G   V+    +   A  ++   
Sbjct: 10  SGPSDASKPLAGKVALTTGAGRGIGRGIAIELGR---RGASVVVNYGSSSKAAEEVVAEL 66

Query: 75  NRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE 134
            +   +   +Q D++  S + A        +G L+ +++ SG+    + L  E T    +
Sbjct: 67  KKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDEL--EVTQELFD 124

Query: 135 KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS 194
           K      + +N  G   V +      + GG  I          S+    +          
Sbjct: 125 K-----VFNLNTRGQFFVAQQGLKHCRRGGRII--------LTSSIAAVMTGI--PNHAL 169

Query: 195 YRASKAALNQ-CKILAMDF 212
           Y  SKAA+   C+  A+D 
Sbjct: 170 YAGSKAAVEGFCRAFAVDC 188

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 56.9 bits (138), Expect = 5e-10
 Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 38/185 (20%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
                ++ GA+ G+G   A++L  +     VI   R+                +++V +L
Sbjct: 15  AQRTVVITGANSGLGAVTARELARRGAT--VIMAVRDTRKGE---AAARTMAGQVEVREL 69

Query: 87  DLTVESTIEASAKSIK---EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
           DL           S++   +     ++LIN +GI+++P       T++  E     +   
Sbjct: 70  DL-------QDLSSVRRFADGVSGADVLINNAGIMAVP----YALTVDGFE---SQIG-- 113

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-------GDNRLGGWHSYR 196
            N +G   +   + P L       +R V  V++++   G I          R   W +Y 
Sbjct: 114 TNHLGHFALTNLLLPRLT------DR-VVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYS 166

Query: 197 ASKAA 201
            SK A
Sbjct: 167 QSKLA 171

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 56.8 bits (138), Expect = 5e-10
 Identities = 38/178 (21%), Positives = 68/178 (38%), Gaps = 20/178 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           +G   +V G ++GIG   A         G    +A     +    + DL      ++  +
Sbjct: 9   QGRSVVVTGGTKGIGRGIATVFARA---GANVAVAGRSTADIDACVADLDQLGSGKVIGV 65

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           Q D++  +  +A A    E++G ++++   +G+        P+  L  +    L   + V
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVF-------PDAPLATMTPEQLNGIFAV 118

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N  G    ++     L   G+G       V   S+  G I      GW  Y A+KAA 
Sbjct: 119 NVNGTFYAVQACLDALIASGSG------RVVLTSSITGPITGYP--GWSHYGATKAAQ 168

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 56.5 bits (137), Expect = 5e-10
 Identities = 22/188 (11%), Positives = 51/188 (27%), Gaps = 32/188 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
             G  +V G    +G    +   +      V+    + N             +   ++  
Sbjct: 2   SSGKVIVYGGKGALGSAILEFFKKNGYT--VLNIDLSANDQ----------ADSNILVDG 49

Query: 87  DLTVESTIEASAKSIKE--KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           +       ++  +      +   ++ +   +G           +  +K    +  L  + 
Sbjct: 50  NKNWTEQEQSILEQTASSLQGSQVDGVFCVAGG------WAGGSASSKDFVKNADLMIKQ 103

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           +     +  K  +  LK GG              A         + G   Y  +KAA++ 
Sbjct: 104 SVWSSAIAAKLATTHLKPGGLLQ--------LTGAAAAMGPTPSMIG---YGMAKAAVHH 152

Query: 205 -CKILAMD 211
               LA  
Sbjct: 153 LTSSLAAK 160

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 56.0 bits (136), Expect = 5e-10
 Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 35/173 (20%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
           L+ GA+ G+G  FA+ L     KG  ++ + R    A  L +L      R   L  DL  
Sbjct: 4   LITGATGGLGGAFARAL-----KGHDLLLSGRR---AGALAELAREVGAR--ALPADLAD 53

Query: 91  ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPI 150
           E   +A      E+ G L+LL++A G  +    ++ E   + VE+         + +   
Sbjct: 54  ELEAKALL----EEAGPLDLLVHAVGK-AGRASVR-EAGRDLVEE-----MLAAHLLTAA 102

Query: 151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
            V+KH             +  A      A    +    + G+ +Y A+K AL 
Sbjct: 103 FVLKHA----------RFQKGARAVFFGAYPRYVQ---VPGFAAYAAAKGALE 142

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 56.4 bits (137), Expect = 6e-10
 Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 24/189 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V++V GA+ GIG   A    +    G  V+ T     GA  +     +   +   L+
Sbjct: 11  NDAVAIVTGAAAGIGRAIAGTFAK---AGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLE 67

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
            ++T E   EA  K+  +++G + +L+N +G    P     P +             +++
Sbjct: 68  CNVTDEQHREAVIKAALDQFGKITVLVNNAGG-GGPKPFDMPMSDFEWA--------FKL 118

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N      + +  +P ++  G G       + N+S+  G   +       SY +SKAA+N 
Sbjct: 119 NLFSLFRLSQLAAPHMQKAGGG------AILNISSMAGENTN---VRMASYGSSKAAVNH 169

Query: 205 -CKILAMDF 212
             + +A D 
Sbjct: 170 LTRNIAFDV 178

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 56.4 bits (137), Expect = 6e-10
 Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 24/195 (12%)

Query: 18  SSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKN 75
           +    S+     V++V GASRGIG   A +L      G   VI        A  +     
Sbjct: 17  NLYFQSMMETNKVAIVTGASRGIGAAIAARLAS---DGFTVVINYAGKAAAAEEVAGKIE 73

Query: 76  RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEK 135
               +    Q D++  + +     + +E +G +++L+N +GI+ +  +   ET     ++
Sbjct: 74  AAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIA--ETGDAVFDR 131

Query: 136 SSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSY 195
              ++A  VN  G    ++  +  L+VGG  I        N+S     +       +  Y
Sbjct: 132 ---VIA--VNLKGTFNTLREAAQRLRVGGRII--------NMSTSQVGLL---HPSYGIY 175

Query: 196 RASKAALNQ-CKILA 209
            A+KA +     +L+
Sbjct: 176 AAAKAGVEAMTHVLS 190

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 56.4 bits (137), Expect = 6e-10
 Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 19/186 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G ++LV G SRGIG   A+ LLE    G  V    R+           + + +    + 
Sbjct: 28  AGRIALVTGGSRGIGQMIAQGLLE---AGARVFICARDAEACADTATRLSAYGDCQ-AIP 83

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEV 144
            DL+ E+     A+++ E    L++L+N +G          P +   KV         ++
Sbjct: 84  ADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKV--------MQL 135

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N       I+ + PLL+   +    + A V N+ +  G          ++Y  SKAAL+Q
Sbjct: 136 NVTSVFSCIQQLLPLLRRSAS--AENPARVINIGSVAGISAMG--EQAYAYGPSKAALHQ 191

Query: 205 C-KILA 209
             ++LA
Sbjct: 192 LSRMLA 197

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 56.4 bits (137), Expect = 6e-10
 Identities = 40/189 (21%), Positives = 69/189 (36%), Gaps = 34/189 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-GLLDLKNRFPERLDVLQ 85
           +G V+LV GA+ GIG      L                 GA   + D           L 
Sbjct: 27  EGKVALVTGAAGGIGGAVVTALRAA--------------GARVAVADRAVAGIAADLHLP 72

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
            DL   +  +    ++    G L++++N +G++S   + +  +   +            V
Sbjct: 73  GDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLS--------LGV 124

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N   P  + +   PL+   G G     A+V N+++  G        G   Y  +KAAL  
Sbjct: 125 NVEAPFRICRAAIPLMAAAGGG-----AIV-NVASCWGLRPG---PGHALYCLTKAALAS 175

Query: 205 -CKILAMDF 212
             + + MD 
Sbjct: 176 LTQCMGMDH 184

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 56.1 bits (136), Expect = 7e-10
 Identities = 32/180 (17%), Positives = 64/180 (35%), Gaps = 25/180 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V+L+ G + G+G     + + +  +  V    ++        +L+         +  
Sbjct: 4   TGEVALITGGASGLGRALVDRFVAEGAR--VAVLDKSAERLR---ELEVAHGGNAVGVVG 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE--- 143
           D+      + +A+     +G ++ LI  +GI          T L  + +  +  A++   
Sbjct: 59  DVRSLQDQKRAAERCLAAFGKIDTLIPNAGI------WDYSTALADLPEDKIDAAFDDIF 112

Query: 144 -VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            VN  G I  +K   P L      +           +  G   +   GG   Y A+K A+
Sbjct: 113 HVNVKGYIHAVKACLPALVSSRGSV-------VFTISNAGFYPN---GGGPLYTATKHAV 162

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 56.0 bits (136), Expect = 8e-10
 Identities = 45/189 (23%), Positives = 69/189 (36%), Gaps = 21/189 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G +++V GAS GIG   A     +  K  V+ T RN N    L D           L  
Sbjct: 7   EGKIAIVTGASSGIGRAAALLFAREGAK--VVVTARNGNALAELTDEIAGGGGEAAALAG 64

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYEV 144
           D+  E+  EA  +    ++G L+   N +G L     +         +          + 
Sbjct: 65  DVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRET--------LDT 116

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N     L  K+  P +   G G     ++    S+ VG        G   Y ASKA L  
Sbjct: 117 NLTSAFLAAKYQVPAIAALGGG-----SLT-FTSSFVGHTA--GFAGVAPYAASKAGLIG 168

Query: 205 C-KILAMDF 212
             + LA++ 
Sbjct: 169 LVQALAVEL 177

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 56.1 bits (136), Expect = 8e-10
 Identities = 39/201 (19%), Positives = 82/201 (40%), Gaps = 36/201 (17%)

Query: 16  FTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLK 74
            +    A+ +      L+ GAS GIG   A + LE ++    +I   R       L +LK
Sbjct: 21  MSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR---LEKLEELK 77

Query: 75  NRFPERLD-----VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
               +        V QLD+T    I+   +++ +++  +++L+N +G  ++         
Sbjct: 78  KTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG-KALG-------- 128

Query: 130 LNKVEKSSL-----MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI 184
            ++V + +      +  ++ N    I + + + P+ +       ++   + N    +GSI
Sbjct: 129 SDRVGQIATEDIQDV--FDTNVTALINITQAVLPIFQ------AKNSGDIVN----LGSI 176

Query: 185 -GDNRLGGWHSYRASKAALNQ 204
            G +       Y ASK A+  
Sbjct: 177 AGRDAYPTGSIYCASKFAVGA 197

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 40/189 (21%), Positives = 75/189 (39%), Gaps = 24/189 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  +++ GA  GIG E A         G  V+ +  N + A  ++D   +   +    +
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFAT---AGASVVVSDINADAANHVVDEIQQLGGQAFACR 66

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
            D+T E  + A A     K G +++L+N +G    P     P     +         YE+
Sbjct: 67  CDITSEQELSALADFAISKLGKVDILVNNAGG-GGPKPFDMPMADFRRA--------YEL 117

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N      + + ++P ++  G G      V+  +++      +       SY +SKAA + 
Sbjct: 118 NVFSFFHLSQLVAPEMEKNGGG------VILTITSMAAENKN---INMTSYASSKAAASH 168

Query: 205 -CKILAMDF 212
             + +A D 
Sbjct: 169 LVRNMAFDL 177

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V++V GASRGIG   A +L  +   G  VI T     GA G+     +         
Sbjct: 27  DKQVAIVTGASRGIGRAIALELARR---GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAV 83

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           L++   + ++A  +S  +++G+LN+L+N +GI
Sbjct: 84  LNVNDATAVDALVESTLKEFGALNVLVNNAGI 115

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC--RNPNGATGLLDLKNRFPERLDVL 84
                +V G +RGIGL F + +      G  +A       +       +   F  +    
Sbjct: 13  VNKTIIVTGGNRGIGLAFTRAVAA---AGANVAVIYRSAADAVEVTEKVGKEFGVKTKAY 69

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           Q D++    +  + + I    G ++ LI  +G+
Sbjct: 70  QCDVSNTDIVTKTIQQIDADLGPISGLIANAGV 102

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 33/178 (18%), Positives = 74/178 (41%), Gaps = 21/178 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
            G V+++ G+S GIGL  A+   +   +G  ++   R  +        LK +F  R+  +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAK---EGAHIVLVARQVDRLHEAARSLKEKFGVRVLEV 62

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            +D+     ++A  +S++  +G  ++L+N +G            T+ +         +E+
Sbjct: 63  AVDVATPEGVDAVVESVRSSFGGADILVNNAGT-------GSNETIMEAADEKWQFYWEL 115

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
             +  + + + + P ++  G G       + + ++         L     Y  +KAAL
Sbjct: 116 LVMAAVRLARGLVPGMRARGGG------AIIHNASICAVQP---LWYEPIYNVTKAAL 164

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 55.7 bits (135), Expect = 1e-09
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V+LV GA+ GIGLE A++L ++   G  V    R   G    L          D   
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKE---GLRVFVCARGEEGLRTTLKELREAGVEADGRT 77

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D+     IEA   ++ E+YG +++L+N +G 
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGR 109

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 41/184 (22%), Positives = 68/184 (36%), Gaps = 28/184 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
              V LV G SRGIG    +       +G    +    N   A  ++            +
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAAR---QGWRVGVNYAANREAADAVVAAITESGGEAVAI 81

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ--PETTLNKVEKSSLMLAY 142
             D+   + I A   ++  ++G L+ L+N +GI+  P  +       + ++         
Sbjct: 82  PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERM--------L 133

Query: 143 EVNAVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
            VN  G IL     ++ MS L    G  I        N+S+    +G      +  Y AS
Sbjct: 134 RVNVTGSILCAAEAVRRMSRLYSGQGGAI-------VNVSSMAAILG--SATQYVDYAAS 184

Query: 199 KAAL 202
           KAA+
Sbjct: 185 KAAI 188

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 37/180 (20%), Positives = 59/180 (32%), Gaps = 25/180 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G V LV GA   IGL  A +L E   +G  +     N                      
Sbjct: 6   NGKVCLVTGAGGNIGLATALRLAE---EGTAIALLDMNREALEKAEASVREKGVEARSYV 62

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLAY 142
            D+T E  +  +  S+   +G ++ L N +G          +       +V         
Sbjct: 63  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY-QGAFAPVQDYPSDDFARV--------L 113

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            +N  G   V+K +S  +     G      +V N ++  G  G        +Y  SK A+
Sbjct: 114 TINVTGAFHVLKAVSRQMITQNYG-----RIV-NTASMAGVKGP---PNMAAYGTSKGAI 164

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 54.8 bits (133), Expect = 2e-09
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
           +G VSLV G++RGIG   A++L      G  VI T  +   A  + + + N++  +   +
Sbjct: 6   QGKVSLVTGSTRGIGRAIAEKLASA---GSTVIITGTSGERAKAVAEEIANKYGVKAHGV 62

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +++L  E +I  + + I      +++L+N +GI
Sbjct: 63  EMNLLSEESINKAFEEIYNLVDGIDILVNNAGI 95

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 54.8 bits (133), Expect = 2e-09
 Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCR-NPNGATGLLDLKNRFPERLDVL 84
              ++ V G   GIG    ++L +    G  V+A C  N       L+ +          
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKD---GFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS 68

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           + ++    + + +   +K + G +++L+N +GI
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI 101

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 26/182 (14%), Positives = 60/182 (32%), Gaps = 43/182 (23%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           L+ GAS  +G    ++L +K +   VI   R+                    + +D+T  
Sbjct: 7   LLIGASGTLGSAVKERLEKKAE---VITAGRHS-----------------GDVTVDITNI 46

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
            +I+       E+ G ++ +++A+G  +        + L ++      +       G I 
Sbjct: 47  DSIKKMY----EQVGKVDAIVSATGSATF-------SPLTELTPEKNAVTISSKLGGQIN 95

Query: 152 VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-CKILAM 210
           ++      L   G+            +  +       +    S   +  A+    K  A+
Sbjct: 96  LVLLGIDSLNDKGSFT--------LTTGIMMEDP---IVQGASAAMANGAVTAFAKSAAI 144

Query: 211 DF 212
           + 
Sbjct: 145 EM 146

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 54.8 bits (133), Expect = 2e-09
 Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 7/92 (7%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +G V+LV GASRGIG   A+ L E+   G  VI T  + +GA     + +   +    + 
Sbjct: 8   EGKVALVTGASRGIGKAIAELLAER---GAKVIGTATSESGAQ---AISDYLGDNGKGMA 61

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           L++T   +IEA  K+I +++G +++L+N +GI
Sbjct: 62  LNVTNPESIEAVLKAITDEFGGVDILVNNAGI 93

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 13/104 (12%)

Query: 14  VAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL 73
           +  T++  A   +     LV G +RGIGL  A++L     K  V  T R      GL   
Sbjct: 1   MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHK--VAVTHRGSGAPKGLF-- 56

Query: 74  KNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
                     +++D+T    ++ +  +++E  G + +L++ +G+
Sbjct: 57  ---------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL 91

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 40/193 (20%), Positives = 69/193 (35%), Gaps = 25/193 (12%)

Query: 27  KGGVSLVQGAS--RGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLL-DLKNRFPERL 81
           KG V +V GAS  +G+G+E A+   E    G    I       GA   + +L+  +  + 
Sbjct: 19  KGKVVVVTGASGPKGMGIEAARGCAEM---GAAVAITYASRAQGAEENVKELEKTYGIKA 75

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLML 140
              +  +    + E   K +   +G ++  I  +G       +       N V       
Sbjct: 76  KAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHV------- 128

Query: 141 AYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
             +V+  G     K +    K  GTG       +   ++  G I  N      SY  +KA
Sbjct: 129 -VQVDLNGTFHCAKAVGHHFKERGTG------SLVITASMSGHIA-NFPQEQTSYNVAKA 180

Query: 201 ALNQ-CKILAMDF 212
                 + LA ++
Sbjct: 181 GCIHMARSLANEW 193

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 37/203 (18%), Positives = 67/203 (33%), Gaps = 25/203 (12%)

Query: 14  VAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT--CRNPNGATGLL 71
           V   S      +  G V+LV G+ RGIG   A  L      G  +      +   A  ++
Sbjct: 4   VENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRL---GAKVVVNYANSTKDAEKVV 60

Query: 72  DLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTL 130
                       ++ D+     I          +G L++ ++ SG++S  ++    E   
Sbjct: 61  SEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEF 120

Query: 131 NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLG 190
           ++V        + +N  G   V +     L  GG  +          S+           
Sbjct: 121 DRV--------FSLNTRGQFFVAREAYRHLTEGGRIV--------LTSSNTSKDFSV--P 162

Query: 191 GWHSYRASKAALNQ-CKILAMDF 212
               Y  SK A++   +I + D 
Sbjct: 163 KHSLYSGSKGAVDSFVRIFSKDC 185

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 54.5 bits (132), Expect = 2e-09
 Identities = 30/176 (17%), Positives = 62/176 (35%), Gaps = 27/176 (15%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           + ++ GAS G+G E AK    +        T R+    + L  + N     +     DL 
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKA--TYLTGRS---ESKLSTVTNCLSNNVGYRARDLA 57

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
               +E   + +       + +++++G      +   E    +++    ++  E N    
Sbjct: 58  SHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQ--EQDPEQIQT---LI--ENNLSSA 107

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALNQ 204
           I V++ +    K      ++ V VV      + S           +Y A K A+  
Sbjct: 108 INVLRELVKRYK------DQPVNVV-M----IMSTAAQQPKAQESTYCAVKWAVKG 152

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 36/197 (18%), Positives = 75/197 (38%), Gaps = 17/197 (8%)

Query: 17  TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR 76
           ++  S++ + +  V+++ G + GIG   AK  +    K  V+      +    + +    
Sbjct: 5   STPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAK--VVIADIADDHGQKVCNNIGS 62

Query: 77  FPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
                 V   D+T +  +     +   K+G L+++    G+LS       E      ++ 
Sbjct: 63  PDVISFV-HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKR- 120

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
            +M   ++N  G  LV KH + ++     G     ++V   ++          G  H Y 
Sbjct: 121 -VM---DINVYGAFLVAKHAARVMIPAKKG-----SIV-FTASISSFTA--GEGVSHVYT 168

Query: 197 ASKAALNQ-CKILAMDF 212
           A+K A+      L  + 
Sbjct: 169 ATKHAVLGLTTSLCTEL 185

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 54.5 bits (132), Expect = 2e-09
 Identities = 30/188 (15%), Positives = 69/188 (36%), Gaps = 21/188 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
              V ++ G    +G   A++  E   +G  ++   R       +         R   + 
Sbjct: 10  TDKVVVISGVGPALGTTLARRCAE---QGADLVLAARTVERLEDVAKQVTDTGRRALSVG 66

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D+T ++ +        + YG ++++IN +  +         TT   +       A E+ 
Sbjct: 67  TDITDDAQVAHLVDETMKAYGRVDVVINNAFRVP-SMKPFANTTFEHMRD-----AIELT 120

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
             G + +I+  +P L+     +        N+++ V          + +Y+ +K+AL   
Sbjct: 121 VFGALRLIQGFTPALEESKGAV-------VNVNSMVVRHSQ---AKYGAYKMAKSALLAM 170

Query: 205 CKILAMDF 212
            + LA + 
Sbjct: 171 SQTLATEL 178

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 54.4 bits (132), Expect = 3e-09
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           KG V+LV GASRGIG   A  L ++   G   V+    N   A  ++D   +       +
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQ---GANVVVNYAGNEQKANEVVDEIKKLGSDAIAV 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           + D+     +    K   + +G +++L+N +G+
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGV 92

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 54.1 bits (131), Expect = 3e-09
 Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 29/193 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
            G  +L+ GA++GIG + A+        G   V++             L  +F   +  +
Sbjct: 19  DGKRALITGATKGIGADIARAFAA---AGARLVLSGRDVSELDAARRALGEQFGTDVHTV 75

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSLMLA 141
            +DL         A+   E +G L++L+N +GI         +T     +          
Sbjct: 76  AIDLAEPDAPAELARRAAEAFGGLDVLVNNAGI--SHPQPVVDTDPQLFDAT-------- 125

Query: 142 YEVNAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
             VN   P L+   +   ++  G  G     A++  +++              +Y  SKA
Sbjct: 126 IAVNLRAPALLASAVGKAMVAAGEGG-----AII-TVASAAALAPLPDHY---AYCTSKA 176

Query: 201 ALNQC-KILAMDF 212
            L    K+LA + 
Sbjct: 177 GLVMATKVLAREL 189

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 54.1 bits (131), Expect = 4e-09
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATC-RNPNGATGLLDLKNRFPERLDVL 84
              V+ V G   G+G   +++L +    G  V  +     +  +  L  +          
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDA---GMAVAVSHSERNDHVSTWLMHERDAGRDFKAY 80

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            +D+    + E  A+ +   +G +++LIN +GI
Sbjct: 81  AVDVADFESCERCAEKVLADFGKVDVLINNAGI 113

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 54.2 bits (131), Expect = 4e-09
 Identities = 34/187 (18%), Positives = 67/187 (35%), Gaps = 19/187 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
              +++V GA  G+G   A  L        V    R       L +      +    +  
Sbjct: 27  GKKIAIVTGAGSGVGRAVAVALAGAGYG--VALAGRR---LDALQETAAEIGDDALCVPT 81

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T   ++ A   +  EK+G +++L N +G    P +   + T  + ++   ++    N 
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGT-GAPAIPMEDLTFAQWKQ---VVD--TNL 135

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-C 205
            GP L  +    ++K       R +    N  +   +           Y A+K A+    
Sbjct: 136 TGPFLCTQEAFRVMKAQEPRGGRII----NNGSISATSPR---PYSAPYTATKHAITGLT 188

Query: 206 KILAMDF 212
           K  ++D 
Sbjct: 189 KSTSLDG 195

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 54.2 bits (131), Expect = 4e-09
 Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +   + V G S GIGL  A+ L  +   G  V    R+    +  +D        +D   
Sbjct: 23  RPQTAFVTGVSSGIGLAVARTLAAR---GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSS 79

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D+T    + A+  +  E++G + +L+N++G 
Sbjct: 80  CDVTSTDEVHAAVAAAVERFGPIGILVNSAGR 111

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 54.1 bits (131), Expect = 4e-09
 Identities = 39/184 (21%), Positives = 69/184 (37%), Gaps = 33/184 (17%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPER 80
                +V GA R IG    + FA++       G   V+       GA   +    +    
Sbjct: 7   TNRTIVVAGAGRDIGRACAIRFAQE-------GANVVLTYNGAAEGAATAVAEIEKLGRS 59

Query: 81  LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ--PETTLNKVEKSSL 138
              ++ DLT  + +EA+  +  +K+G ++ L++ +G L     +    E   ++V     
Sbjct: 60  ALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQV----- 114

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
               +VN     L  K   P +  GG  +          S++ G  G     G  +Y  S
Sbjct: 115 ---LDVNLTSLFLTAKTALPKMAKGGAIV--------TFSSQAGRDGGG--PGALAYATS 161

Query: 199 KAAL 202
           K A+
Sbjct: 162 KGAV 165

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 54.2 bits (131), Expect = 4e-09
 Identities = 34/179 (18%), Positives = 72/179 (40%), Gaps = 22/179 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
               +++ G++ GIGL  A+ L +    G   V+     P+    + D +       +  
Sbjct: 24  MTKTAVITGSTSGIGLAIARTLAK---AGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH 80

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
              D+T  S I      + +++G  ++L+N +G+  +  +         VE+   ++A  
Sbjct: 81  HPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIED-----FPVEQWDRIIA-- 133

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           VN       I+   P +K  G G      ++ N+++  G +         +Y A+K  +
Sbjct: 134 VNLSSSFHTIRGAIPPMKKKGWG-----RII-NIASAHGLVAS---PFKSAYVAAKHGI 183

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 54.3 bits (131), Expect = 4e-09
 Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 16/178 (8%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVL- 84
            G  + V G + G+G+   +QLL    +GC +A      +     L          +V+ 
Sbjct: 7   AGRTAFVTGGANGVGIGLVRQLLN---QGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63

Query: 85  -QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
            QLD+      + +A  ++ ++G +++L N +G+     +   E++ +  +         
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIE--ESSYDDWDW-----LLG 116

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
           VN  G +  +    P +       E+    V N ++    +     G    Y  +K A
Sbjct: 117 VNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPG---IYNTTKFA 171

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 53.6 bits (130), Expect = 4e-09
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDVLQL 86
            +L+ GASRGIG   A +L E    G    I   +N   A  + +  + R    + VL  
Sbjct: 3   KALITGASRGIGRAIALRLAED---GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGA 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +L       A      E  G L+ L+N +GI
Sbjct: 60  NLLEAEAATALVHQAAEVLGGLDTLVNNAGI 90

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 53.6 bits (130), Expect = 4e-09
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
               +LV GASRGIG   A QL E+   G    +    +   A  +++           +
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEE---GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           Q ++     ++A  K +  ++GSL++L+N +GI
Sbjct: 60  QANVADADEVKAMIKEVVSQFGSLDVLVNNAGI 92

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 53.7 bits (130), Expect = 5e-09
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
              ++LV GASRGIG   A +L      G    +    +   A  ++            +
Sbjct: 27  TDRIALVTGASRGIGRAIALELAAA---GAKVAVNYASSAGAADEVVAAIAAAGGEAFAV 83

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           + D++ ES +EA   ++ E++G L++L+N +GI
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVNNAGI 116

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 53.7 bits (130), Expect = 5e-09
 Identities = 33/178 (18%), Positives = 65/178 (36%), Gaps = 21/178 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K  V +V GA  GIG   AK+    +    V+A     +    ++       + +  ++ 
Sbjct: 6   KNKVVIVTGAGSGIGRAIAKKFALNDSI--VVAVELLEDRLNQIVQELRGMGKEVLGVKA 63

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPETTLNKVEKSSLMLAYEV 144
           D++ +  +E   +   E Y  +++L N +GI+     +    +    +V          V
Sbjct: 64  DVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERV--------LAV 115

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N        + + P++   G G      +V N ++  G  G         Y  +K  L
Sbjct: 116 NLYSAFYSSRAVIPIMLKQGKG-----VIV-NTASIAGIRGG---FAGAPYTVAKHGL 164

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 53.8 bits (130), Expect = 5e-09
 Identities = 38/179 (21%), Positives = 66/179 (36%), Gaps = 15/179 (8%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G V +V GASRGIG   A QL +    G  V  T R+ +    +         +   + 
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCK---AGATVYITGRHLDTLRVVAQEAQSLGGQCVPVV 60

Query: 86  LDLTVESTIEASAKSI-KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            D + ES + +  + + +E+ G L++L+N +       +        +   S       V
Sbjct: 61  CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNV 120

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
              G      + + L+   G G      ++  +S    S G  +      Y   KAA +
Sbjct: 121 GLRGHYFCSVYGARLMVPAGQG------LIVVIS----SPGSLQYMFNVPYGVGKAACD 169

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 53.3 bits (129), Expect = 6e-09
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
           V +V GASRGIG   A  L +    GC  ++   R+   A  +      +  +      D
Sbjct: 3   VVVVTGASRGIGKAIALSLGKA---GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGD 59

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGI 117
           ++ E+ +EA  K+  + +G++++++N +GI
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGI 89

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 53.3 bits (129), Expect = 6e-09
 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 13/108 (12%)

Query: 10  SIRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG 69
           S       SS            LV G +RGIGL  A+   +  DK  V  T R+     G
Sbjct: 3   SSHHHHHHSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDK--VAITYRSGEPPEG 60

Query: 70  LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            L            ++ D+T    +E + K I+E +G + +LI  +G+
Sbjct: 61  FL-----------AVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGV 97

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 53.4 bits (129), Expect = 6e-09
 Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 19/177 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G V++V GASRGIG   A++L      G  V+ T R+      +           +   
Sbjct: 28  SGQVAVVTGASRGIGAAIARKLGS---LGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            DL+    I A A  +   +G  ++L+N +G+      L       K  +   ++   VN
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPL----HTMKPAEWDALI--AVN 138

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
              P L+++  +P +     G       + N+S+  G           +Y ASK  L
Sbjct: 139 LKAPYLLLRAFAPAMIAAKRG------HIINISSLAGKNPV---ADGAAYTASKWGL 186

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 53.4 bits (129), Expect = 6e-09
 Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 27/184 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQ 85
           K  V +V GAS G+G    + L ++   G  +      P       +        +    
Sbjct: 6   KSRVFIVTGASSGLGAAVTRMLAQE---GATVLGLDLKPPAGE---EPAAELGAAVRFRN 59

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML---AY 142
            D+T E+   A+    K+++G ++ L+N +G          E  L +    +L       
Sbjct: 60  ADVTNEADATAALAFAKQEFGHVHGLVNCAGT------APGEKILGRSGPHALDSFARTV 113

Query: 143 EVNAVGPILVIKHMSPL---LKVGGTGIERDVAV-VANLSARVGSIGDNRLGGWHSYRAS 198
            VN +G   +I+  + +    +    G ER V V  A+++A  G IG        +Y AS
Sbjct: 114 AVNLIGTFNMIRLAAEVMSQGEPDADG-ERGVIVNTASIAAFDGQIGQA------AYAAS 166

Query: 199 KAAL 202
           K  +
Sbjct: 167 KGGV 170

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 53.4 bits (129), Expect = 7e-09
 Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLL-DLKNRFPERLDVL 84
                LV G ++GIG   A         G  V    R+P   + +  +L       +  +
Sbjct: 40  SARSVLVTGGTKGIGRGIATVFARA---GANVAVAARSPRELSSVTAELGELGAGNVIGV 96

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +LD++   +   +A+++ + +G+L+++   +GI
Sbjct: 97  RLDVSDPGSCADAARTVVDAFGALDVVCANAGI 129

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 53.2 bits (129), Expect = 7e-09
 Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           KG  ++V G+SRG+G   A +L      G   V+             +        + V 
Sbjct: 4   KGKTAIVTGSSRGLGKAIAWKLGNM---GANIVLNGSPASTSLDATAEEFKAAGINVVVA 60

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           + D+     +E   K+  + +G +++L+N +GI
Sbjct: 61  KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGI 93

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 53.3 bits (129), Expect = 7e-09
 Identities = 34/178 (19%), Positives = 59/178 (33%), Gaps = 32/178 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G    V GA +GIG   A   +E    G  V    +                       
Sbjct: 6   SGKNVWVTGAGKGIGYATALAFVEA---GAKVTGFDQAFTQEQY----------PFATEV 52

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
           +D+   + +    + +  +   L+ L+NA+GIL +    Q  +    +         + V
Sbjct: 53  MDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQT--------FAV 104

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N  G   + +      +    G     A+V  +++           G  +Y ASKAAL
Sbjct: 105 NVGGAFNLFQQTMNQFRRQRGG-----AIV-TVASDAAHTPR---IGMSAYGASKAAL 153

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 53.0 bits (128), Expect = 8e-09
 Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 18/178 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           +G ++LV G   G+G   A+ L     +G   VI   R         ++  R    +  +
Sbjct: 32  EGRIALVTGGGTGVGRGIAQALSA---EGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAV 88

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             D+     + A   +++ ++  L+LL+N +G  ++P V   E T  +      ++A   
Sbjct: 89  VCDVGDPDQVAALFAAVRAEFARLDLLVNNAGS-NVPPVPLEEVTFEQWNG---IVA--A 142

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N  G  L  +H   ++K       R +    N  +               Y A+K A+
Sbjct: 143 NLTGAFLCTQHAFRMMKAQTPRGGRII----NNGSISAQTPR---PNSAPYTATKHAI 193

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 53.0 bits (128), Expect = 9e-09
 Identities = 40/196 (20%), Positives = 79/196 (40%), Gaps = 23/196 (11%)

Query: 20  ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRF 77
              S   +G V+LV GA RGIG E A +L  +   GC  ++    +   A  ++    + 
Sbjct: 21  GPQSASLEGKVALVTGAGRGIGREMAMELGRR---GCKVIVNYANSTESAEEVVAAIKKN 77

Query: 78  PERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSS 137
                 ++ ++ V   I    +   + +G L+++ + SG++S  +V   + T  + ++  
Sbjct: 78  GSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVK--DVTPEEFDR-- 133

Query: 138 LMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRA 197
               + +N  G   V +     L++GG  I         + +  G            Y  
Sbjct: 134 ---VFTINTRGQFFVAREAYKHLEIGGRLI--------LMGSITGQAKAV--PKHAVYSG 180

Query: 198 SKAALNQ-CKILAMDF 212
           SK A+    + +A+D 
Sbjct: 181 SKGAIETFARCMAIDM 196

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 52.9 bits (128), Expect = 1e-08
 Identities = 29/191 (15%), Positives = 70/191 (36%), Gaps = 26/191 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA----TCRNPNGATGLLDLKNRFPERLD 82
           K  V ++ G  + +G   AK       +   +       ++ + A  L D       ++ 
Sbjct: 10  KNKVIVIAGGIKNLGALTAKTFAL---ESVNLVLHYHQAKDSDTANKLKDELEDQGAKVA 66

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
           + Q DL+ E  +       ++++G +++ IN  G +    ++  ET+  + +    M   
Sbjct: 67  LYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIV--ETSEAEFDA---MDT- 120

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            +N       IK  +  +   G  I         ++  + +      G + +Y  +KA +
Sbjct: 121 -INNKVAYFFIKQAAKHMNPNGHII--------TIATSLLAAY---TGFYSTYAGNKAPV 168

Query: 203 NQ-CKILAMDF 212
               +  + + 
Sbjct: 169 EHYTRAASKEL 179

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 27/176 (15%), Positives = 63/176 (35%), Gaps = 19/176 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  ++V G + GIGL  A +      +G  ++ +  +       ++           + 
Sbjct: 30  DGRAAVVTGGASGIGLATATEFAR---RGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV 86

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D+     +   A       G ++++ + +GI+    +   +   +           +++
Sbjct: 87  CDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLA--QMNHDDWRW-----VIDID 139

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
             G I  ++   P L   GTG       +A  ++  G + +  LG   +Y  +K  
Sbjct: 140 LWGSIHAVEAFLPRLLEQGTG-----GHIAFTASFAGLVPNAGLG---TYGVAKYG 187

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 22/187 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           +  V+ + G   GIG   A+  +     GC  VIA+   P   T    L      R   L
Sbjct: 26  RDKVAFITGGGSGIGFRIAEIFMR---HGCHTVIASRSLPRVLTAARKLAGATGRRCLPL 82

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            +D+     + A+     +++G +++LIN +      N L P   L+     ++M   ++
Sbjct: 83  SMDVRAPPAVMAAVDQALKEFGRIDILINCAAG----NFLCPAGALSFNAFKTVM---DI 135

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           +  G   V + +         G      V+ N++A +G+ G           ++KAA++ 
Sbjct: 136 DTSGTFNVSRVLYEKFFRDHGG------VIVNITATLGNRG---QALQVHAGSAKAAVDA 186

Query: 205 -CKILAM 210
             + LA+
Sbjct: 187 MTRHLAV 193

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 35/204 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
              V+LV GA++ +G   A+ L     +G    +   R+   A  L   L  R P     
Sbjct: 45  TVPVALVTGAAKRLGRSIAEGLHA---EGYAVCLHYHRSAAEANALSATLNARRPNSAIT 101

Query: 84  LQLDLTVEST-----------------IEASAKSIKEKYGSLNLLINASGILSIPNVL-- 124
           +Q DL+  +T                       +    +G  ++L+N +     P  L  
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLR 160

Query: 125 ------QPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178
                 +P     +  +++    +  NA+ P  +IK  +  +             + N+ 
Sbjct: 161 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 220

Query: 179 ARVGSIGDNRLGGWHSYRASKAAL 202
             + +     L G+  Y  +K AL
Sbjct: 221 DAMTNQP---LLGYTIYTMAKGAL 241

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 37/177 (20%), Positives = 72/177 (40%), Gaps = 19/177 (10%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
             V++V G ++GIG   +++L        V    +    A   + L     ++   + LD
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVNA 146
           +T ++  +++     EK G  ++L+N +GI  I  +L+  E  L ++        Y VN 
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQI--------YSVNV 113

Query: 147 VGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
                 I+  S    ++G  G       + N ++     G   L    +Y  +K A+
Sbjct: 114 FSVFFGIQAASRKFDELGVKG------KIINAASIAAIQGFPILS---AYSTTKFAV 161

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 33/196 (16%)

Query: 17  TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR 76
           +S              + GA+ G G   A++  E      ++ T R       L  L   
Sbjct: 10  SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWS--LVLTGRR---EERLQALAGE 64

Query: 77  FPERLDV--LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE 134
              +  V  L LD+   + + A+  ++ E++ +L  LIN +G L++          +  +
Sbjct: 65  LSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAG-LALG--------TDPAQ 115

Query: 135 KSSL-----MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNR 188
              L     M   + N  G +   + + P L   G G     A + N    +GS+ G   
Sbjct: 116 SCDLDDWDTM--VDTNIKGLLYSTRLLLPRLIAHGAG-----ASIVN----LGSVAGKWP 164

Query: 189 LGGWHSYRASKAALNQ 204
             G H Y  +KA + Q
Sbjct: 165 YPGSHVYGGTKAFVEQ 180

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 51.8 bits (125), Expect = 3e-08
 Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 13/92 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +  V ++ GAS+GIG    +   ++      V+AT R+   +             +  + 
Sbjct: 27  QQKVVVITGASQGIGAGLVRAYRDR---NYRVVATSRSIKPSAD---------PDIHTVA 74

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D++   T +   +   E++G ++ L+N +G+
Sbjct: 75  GDISKPETADRIVREGIERFGRIDSLVNNAGV 106

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 51.4 bits (124), Expect = 3e-08
 Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 26/182 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDV 83
              V L+ GAS GIG   A++L     K  ++   R       +  +     +       
Sbjct: 3   MDKVILITGASGGIGEGIARELGVAGAK--ILLGARR---QARIEAIATEIRDAGGTALA 57

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
             LD+T   ++ A A++  + +G +++L+N +G++     L P   + KV++   M   +
Sbjct: 58  QVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMP----LSPLAAV-KVDEWERM--ID 110

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAAL 202
           VN  G +  I  + P++        +    + N    +GSI   + +     Y A+K A+
Sbjct: 111 VNIKGVLWGIGAVLPIM------EAQRSGQIIN----IGSIGALSVVPTAAVYCATKFAV 160

Query: 203 NQ 204
             
Sbjct: 161 RA 162

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 51.6 bits (124), Expect = 3e-08
 Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 35/204 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
              V+LV GA++ +G   A+ L     +G    +   R+   A  L   L  R P     
Sbjct: 8   TVPVALVTGAAKRLGRSIAEGLHA---EGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64

Query: 84  LQLDL-----------------TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL-- 124
           +Q DL                 T+ +       +    +G  ++L+N +     P  L  
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLR 123

Query: 125 ------QPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS 178
                 +P     +  +++    +  NA+ P  +IK  +  +             + N+ 
Sbjct: 124 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 183

Query: 179 ARVGSIGDNRLGGWHSYRASKAAL 202
             + +     L G+  Y  +K AL
Sbjct: 184 DAMTNQP---LLGYTIYTMAKGAL 204

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 51.4 bits (124), Expect = 3e-08
 Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 33/205 (16%)

Query: 16  FTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT--CRNPNGATGLLDL 73
           +  S   S+   G  + V G SRGIG   AK+L  +   G  +A         A  ++  
Sbjct: 19  YFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALE---GAAVALTYVNAAERAQAVVSE 75

Query: 74  KNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKV 133
             +   R   ++ D      IE + +   E  G L++L+N++GI               +
Sbjct: 76  IEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGI----------WHSAPL 125

Query: 134 EKSSL-----MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188
           E++++     ++A  VN   P + I+  S  L  GG  I         + + +  +    
Sbjct: 126 EETTVADFDEVMA--VNFRAPFVAIRSASRHLGDGGRII--------TIGSNLAELVPW- 174

Query: 189 LGGWHSYRASKAALNQ-CKILAMDF 212
             G   Y ASKAAL    K LA D 
Sbjct: 175 -PGISLYSASKAALAGLTKGLARDL 198

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 51.1 bits (123), Expect = 4e-08
 Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 22/179 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLD-LKNRFPERLDV 83
           KG V++V G++ GIGL  A  L     +G   V+    +      +   L  +   ++  
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAA---QGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLY 59

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
              DL+    +     +   + G +++L+N +GI     +          EK   +LA  
Sbjct: 60  DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIED-----FPTEKWDAILA-- 112

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           +N            P +K  G G       + N+++  G +         +Y A+K  +
Sbjct: 113 LNLSAVFHGTAAALPHMKKQGFG------RIINIASAHGLVAS---ANKSAYVAAKHGV 162

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 51.0 bits (123), Expect = 4e-08
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 9/91 (9%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G  SL+ GAS GIG   A+ L +   K  VI +  N         L N   +   +   
Sbjct: 13  TGKTSLITGASSGIGSAIARLLHKLGSK--VIISGSNEEKLK---SLGNALKDNYTIEVC 67

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +L  +         +  K  +L++L+  +GI
Sbjct: 68  NLANKEECSN----LISKTSNLDILVCNAGI 94

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 51.0 bits (123), Expect = 4e-08
 Identities = 35/178 (19%), Positives = 65/178 (36%), Gaps = 24/178 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  ++V G S+GIG   A+ L +    G  V     +   A     +          ++
Sbjct: 11  SGRKAIVTGGSKGIGAAIARALDK---AGATVAIADLDVMAAQ---AVVAGLENGGFAVE 64

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           +D+T  ++++A+ +   +  G  +LL   +G+               +        ++VN
Sbjct: 65  VDVTKRASVDAAMQKAIDALGGFDLLCANAGVS-------TMRPAVDITDEEWDFNFDVN 117

Query: 146 AVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           A G  L  +      L     G      V+ N ++    +G   L     Y ASK A+
Sbjct: 118 ARGVFLANQIACRHFLASNTKG------VIVNTASLAAKVGAPLLA---HYSASKFAV 166

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 51.1 bits (123), Expect = 5e-08
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 5/93 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC--RNPNGATGLLDLKNRFPERLDVL 84
              V++V G  RGIGL  A+ L      G  IA     +  G   ++   +    R+  L
Sbjct: 28  ARPVAIVTGGRRGIGLGIARALAA---SGFDIAITGIGDAEGVAPVIAELSGLGARVIFL 84

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           + DL   S+ +A+  ++  ++G ++ L+N +GI
Sbjct: 85  RADLADLSSHQATVDAVVAEFGRIDCLVNNAGI 117

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 50.6 bits (122), Expect = 6e-08
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  +LV G++RG+G  +A+ L      G  VI            +D   R       + 
Sbjct: 8   TGKTALVTGSARGLGFAYAEGLAAA---GARVILNDIRATLLAESVDTLTRKGYDAHGVA 64

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D+T E  IEA+   +  +   +++LIN +GI
Sbjct: 65  FDVTDELAIEAAFSKLDAEGIHVDILINNAGI 96

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 50.6 bits (122), Expect = 6e-08
 Identities = 36/182 (19%), Positives = 74/182 (40%), Gaps = 28/182 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           +G V ++ G+S G+G   A +      +    V+      + A  +L+   +       +
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFAT---EKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAV 62

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           + D+TVES +    +S  +++G L+++IN +G+       +   + +++  S      + 
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGL-------ENPVSSHEMSLSDWNKVIDT 115

Query: 145 NAVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKA 200
           N  G  L     IK+    ++    G       V N+S+    I       +  Y ASK 
Sbjct: 116 NLTGAFLGSREAIKYF---VENDIKG------TVINMSSVHEKIPW---PLFVHYAASKG 163

Query: 201 AL 202
            +
Sbjct: 164 GM 165

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 50.7 bits (122), Expect = 7e-08
 Identities = 34/191 (17%), Positives = 74/191 (38%), Gaps = 26/191 (13%)

Query: 15  AFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK 74
           + T            + ++ GAS GIG   A++  E+     ++   R       L  L 
Sbjct: 3   SMTGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHP--LLLLARR---VERLKALN 57

Query: 75  NRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE 134
                     Q+D+T + T + +    ++ YG  + ++N +G++    +L    T  +  
Sbjct: 58  L---PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMM----LLGQIDTQ-EAN 109

Query: 135 KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWH 193
           +   M  ++VN +G +  ++ +   +        R+   + N    + SI G        
Sbjct: 110 EWQRM--FDVNVLGLLNGMQAVLAPM------KARNCGTIIN----ISSIAGKKTFPDHA 157

Query: 194 SYRASKAALNQ 204
           +Y  +K A++ 
Sbjct: 158 AYCGTKFAVHA 168

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 50.3 bits (121), Expect = 7e-08
 Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 26/179 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           KG  +LV G++ GIGL  A+ L      G  ++            L    R   +     
Sbjct: 3   KGKTALVTGSTSGIGLGIAQVLAR---AGANIVLNGFGDPAPA--LAEIARHGVKAVHHP 57

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLN--KVEKSSLMLAYE 143
            DL+  + IEA     + ++G +++L+N +GI       Q    +    +E    ++A  
Sbjct: 58  ADLSDVAQIEALFALAEREFGGVDILVNNAGI-------QHVAPVEQFPLESWDKIIA-- 108

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           +N        +   P ++    G      ++ N+++  G +G     G  +Y A+K  +
Sbjct: 109 LNLSAVFHGTRLALPGMRARNWG-----RII-NIASVHGLVGS---TGKAAYVAAKHGV 158

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 50.3 bits (121), Expect = 8e-08
 Identities = 29/187 (15%), Positives = 63/187 (33%), Gaps = 21/187 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLD-LKNRFPERLDVL 84
           +G V+ + G   G+G      L      G       R  +      + + ++   ++  +
Sbjct: 25  QGKVAFITGGGTGLGKGMTTLLSS---LGAQCVIASRKMDVLKATAEQISSQTGNKVHAI 81

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           Q D+     ++ +   + +  G  N++IN +      N + P   L+     ++    ++
Sbjct: 82  QCDVRDPDMVQNTVSELIKVAGHPNIVINNAAG----NFISPTERLSPNAWKTIT---DI 134

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
              G   V   +   L     G     A   +++      G    G      ++KA +  
Sbjct: 135 VLNGTAFVTLEIGKQLIKAQKG-----AAFLSITTIYAETG---SGFVVPSASAKAGVEA 186

Query: 205 -CKILAM 210
             K LA 
Sbjct: 187 MSKSLAA 193

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 50.2 bits (121), Expect = 9e-08
 Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
               +L+   ++G+G +  ++LL    KG    +    +      + +      ERL  +
Sbjct: 6   FVRHALITAGTKGLGKQVTEKLLA---KGYSVTVTYHSDTTAMETMKETYKDVEERLQFV 62

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLIN 113
           Q D+T +  +    +     +G ++ LIN
Sbjct: 63  QADVTKKEDLHKIVEEAMSHFGKIDFLIN 91

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 50.2 bits (121), Expect = 9e-08
 Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 22/181 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNP-NGATGLLDLKNRFPERLDVL 84
           +G V+LV G SRG+G   A+ L E    GC V+   RN    +     L  ++       
Sbjct: 20  RGRVALVTGGSRGLGFGIAQGLAEA---GCSVVVASRNLEEASEAAQKLTEKYGVETMAF 76

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYE 143
           + D++    ++   +++KEK+G L+ ++NA+GI    P    P     +V         E
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQV--------IE 128

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           VN  G   V +    LL+            + N+ +              +Y ASK  + 
Sbjct: 129 VNLFGTYYVCREAFSLLRESDNP------SIINIGSLTVEEVTMP--NISAYAASKGGVA 180

Query: 204 Q 204
            
Sbjct: 181 S 181

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 49.8 bits (120), Expect = 9e-08
 Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 23/176 (13%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDL 88
           V+LV GA +GIG   A +L++    G  +A    N   A  +    N+       +++D+
Sbjct: 4   VALVTGAGQGIGKAIALRLVK---DGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDV 60

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEVNAV 147
           +    + A+ +  ++  G  ++++N +G+     +       ++KV        Y +N  
Sbjct: 61  SDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKV--------YNINVK 112

Query: 148 GPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           G I  I+       K G  G       + N  ++ G +G+  L     Y +SK A+
Sbjct: 113 GVIWGIQAAVEAFKKEGHGG------KIINACSQAGHVGNPELA---VYSSSKFAV 159

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 43/195 (22%), Positives = 72/195 (36%), Gaps = 32/195 (16%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERL 81
              V+L+ GA  GIG    L  A         G  V A  R       + D       + 
Sbjct: 27  PSPVALITGAGSGIGRATALALAAD-------GVTVGALGRTRTEVEEVADEIVGAGGQA 79

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL---NKVEKSSL 138
             L+ D++ E  +  + + +  K+G L++++  +GI         +      ++      
Sbjct: 80  IALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGING-VWAPIDDLKPFEWDET----- 133

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
                VN  G  L +    P LK  G G     A+V  +S+  G        G  +Y A+
Sbjct: 134 ---IAVNLRGTFLTLHLTVPYLKQRGGG-----AIV-VVSSING-TRTFTTPGATAYTAT 183

Query: 199 KAALNQ-CKILAMDF 212
           KAA     + LA++ 
Sbjct: 184 KAAQVAIVQQLALEL 198

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 49.6 bits (119), Expect = 1e-07
 Identities = 26/187 (13%), Positives = 52/187 (27%), Gaps = 28/187 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +    LV G    +G    +    +N    V +     N               + +   
Sbjct: 6   EARRVLVYGGRGALGSRCVQAFRARNWW--VASIDVVENEEASA-------SVIVKMTDS 56

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
                  + A    +      ++ ++  +G  +  N    ++     +   LM     + 
Sbjct: 57  FTEQADQVTAEVGKL-LGDQKVDAILCVAGGWAGGNAKS-KSLF---KNCDLMWK--QSI 109

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-C 205
               +     +  LK GG              A+    G     G   Y  +K A++Q C
Sbjct: 110 WTSTISSHLATKHLKEGGLLT--------LAGAKAALDGT---PGMIGYGMAKGAVHQLC 158

Query: 206 KILAMDF 212
           + LA   
Sbjct: 159 QSLAGKN 165

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 49.5 bits (119), Expect = 1e-07
 Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 39/188 (20%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-----NRFPERL 81
           +  V++V G + G+GL   K+LL+    G  +           +LD++         +R 
Sbjct: 8   RDAVAVVTGGASGLGLATTKRLLD---AGAQVV----------VLDIRGEDVVADLGDRA 54

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLML- 140
                D+T E+ + + A  + E  G+L +++N +G             L++    SL   
Sbjct: 55  RFAAADVTDEAAVAS-ALDLAETMGTLRIVVNCAGT------GNAIRVLSRDGVFSLAAF 107

Query: 141 --AYEVNAVGPILVIK----HMSPLLKVGGTGIERDVAV-VANLSARVGSIGDNRLGGWH 193
               ++N VG   V++     ++    VG    ER V +  A+++A  G IG        
Sbjct: 108 RKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQA------ 161

Query: 194 SYRASKAA 201
           +Y ASK  
Sbjct: 162 AYSASKGG 169

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 49.4 bits (119), Expect = 1e-07
 Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQ 85
           K  V ++ G S G+G   A +  +   +G  +    R             +FP ++  +Q
Sbjct: 5   KEKVVIITGGSSGMGKGMATRFAK---EGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ 61

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +D+     I+   + I EK+G +++LIN +  
Sbjct: 62  MDVRNTDDIQKMIEQIDEKFGRIDILINNAAG 93

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 49.4 bits (119), Expect = 2e-07
 Identities = 35/178 (19%), Positives = 74/178 (41%), Gaps = 21/178 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           +   +LV G+SRG+G   A +L E    G   VI   R+   A    +   +   ++ V+
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAE---NGYNIVINYARSKKAALETAEEIEKLGVKVLVV 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           + ++   + I+   + I E +G L++ +N +              + ++E++       +
Sbjct: 60  KANVGQPAKIKEMFQQIDETFGRLDVFVNNAAS-------GVLRPVMELEETHWDWTMNI 112

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           NA   +   +  + L++  G G       + ++S+         L  + +   SKAAL
Sbjct: 113 NAKALLFCAQEAAKLMEKNGGG------HIVSISSLGSIRY---LENYTTVGVSKAAL 161

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 25/190 (13%)

Query: 20  ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE 79
           A+A    KG V+++ G + G+GL  A++L+ +     V+    N  G         +   
Sbjct: 4   AAACRSVKGLVAVITGGASGLGLATAERLVGQGAS-AVLLDLPNSGGEA----QAKKLGN 58

Query: 80  RLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLM 139
                  D+T E  ++ +    K K+G +++ +N +GI           T N  +  +  
Sbjct: 59  NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGI------AVASKTYNLKKGQTHT 112

Query: 140 LAY-----EVNAVGPILVIKHMSPLL--KVGGTGIERDVAV-VANLSARVGSIGDNRLGG 191
           L       +VN +G   VI+ ++  +       G +R V +  A+++A  G +G      
Sbjct: 113 LEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA---- 168

Query: 192 WHSYRASKAA 201
             +Y ASK  
Sbjct: 169 --AYSASKGG 176

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 33/192 (17%), Positives = 72/192 (37%), Gaps = 21/192 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC--VIATCRNPNGATGLLDLKNRFPERLDVL 84
           +G  ++V G + G+G    ++L      G   VIA      G      L +    R + +
Sbjct: 29  EGASAIVSGGAGGLGEATVRRLHAD---GLGVVIADLAAEKGKA----LADELGNRAEFV 81

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             ++T E ++ A+ ++  +       ++   G      ++Q + +   +   +  +  ++
Sbjct: 82  STNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTI--DL 139

Query: 145 NAVGPILVIKHMSPLLK--VGGTGIERDVAV-VANLSARVGSIGDNRLGGWHSYRASKAA 201
              G   V + ++  +         ER   V  A+++   G IG        +Y A+KA 
Sbjct: 140 YLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ------TAYAAAKAG 193

Query: 202 LNQ-CKILAMDF 212
           +       A D 
Sbjct: 194 VIGLTIAAARDL 205

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 49.0 bits (118), Expect = 2e-07
 Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 7/96 (7%)

Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERL 81
           + +  G  +LV GA++GIG   A +L      G  VI +  N  GA           ++ 
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAA---DGATVIVSDINAEGAKAAAA---SIGKKA 54

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
             +  D++   +++A    I+   G +++L+N + I
Sbjct: 55  RAIAADISDPGSVKALFAEIQALTGGIDILVNNASI 90

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 48.6 bits (117), Expect = 2e-07
 Identities = 34/181 (18%), Positives = 68/181 (37%), Gaps = 30/181 (16%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K  ++++ G + GIG   A++      +G  IA   +   A            R+  ++ 
Sbjct: 6   KDKLAVITGGANGIGRAIAERFAV---EGADIAIA-DLVPAPEAEAAIRNLGRRVLTVKC 61

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL-----MLA 141
           D++    +EA  K +   +G  ++L+N +GI            L   ++ +         
Sbjct: 62  DVSQPGDVEAFGKQVISTFGRCDILVNNAGI----------YPLIPFDELTFEQWKKTFE 111

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
             +N     L+ K   P +K  G G       + NL++    +       +  Y ++KAA
Sbjct: 112 --INVDSGFLMAKAFVPGMKRNGWG------RIINLTSTTYWLK-IE--AYTHYISTKAA 160

Query: 202 L 202
            
Sbjct: 161 N 161

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 48.7 bits (117), Expect = 3e-07
 Identities = 24/183 (13%), Positives = 59/183 (32%), Gaps = 31/183 (16%)

Query: 30  VSLVQGASRGIGLEFAKQLLEK-----NDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           + L+ GA +GIG   A +         + +  ++ + R       +           D +
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL-----M 139
             D++  + +      I E+YG ++ L+N +G+               +   +       
Sbjct: 64  TADISDMADVRRLTTHIVERYGHIDCLVNNAGV----------GRFGALSDLTEEDFDYT 113

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
           +    N  G   + + +  L++   +G       +  +++   +           Y  SK
Sbjct: 114 M--NTNLKGTFFLTQALFALMERQHSG------HIFFITSVAATKAF---RHSSIYCMSK 162

Query: 200 AAL 202
              
Sbjct: 163 FGQ 165

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 48.7 bits (117), Expect = 3e-07
 Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 30/186 (16%)

Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERL 81
           S++++  V +V G+  GIG  +A+ L     +G  V+    N   A  +           
Sbjct: 4   SMRFENKVGIVTGSGGGIGQAYAEALAR---EGAAVVVADINAEAAEAVAKQIVADGGTA 60

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL--- 138
             + +D++   + +A A     ++G ++ L+N + I            L+ +        
Sbjct: 61  ISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAI-------FGGMKLDFLLTIDPEYY 113

Query: 139 --MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
              ++  VN  G +   + +   +   G G       + N S+    +  N       Y 
Sbjct: 114 KKFMS--VNLDGALWCTRAVYKKMTKRGGG------AIVNQSSTAAWLYSN------YYG 159

Query: 197 ASKAAL 202
            +K  +
Sbjct: 160 LAKVGI 165

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 48.7 bits (117), Expect = 3e-07
 Identities = 23/179 (12%), Positives = 60/179 (33%), Gaps = 23/179 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFP-ERLDV 83
           +G +++V   S G+G   A +L      G  ++   RN          + +     ++D+
Sbjct: 6   QGKLAVVTAGSSGLGFASALELAR---NGARLLLFSRNREKLEAAASRIASLVSGAQVDI 62

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
           +  D+     I+   +  ++  G  ++L+ ++G    P          ++       +Y 
Sbjct: 63  VAGDIREPGDIDRLFEKARD-LGGADILVYSTG---GP----RPGRFMELGVEDWDESYR 114

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           + A   + V +  +  +   G G       +  + +         L         +  +
Sbjct: 115 LLARSAVWVGRRAAEQMVEKGWG------RMVYIGSVTLLRPWQDLA---LSNIMRLPV 164

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 48.5 bits (116), Expect = 3e-07
 Identities = 35/205 (17%), Positives = 59/205 (28%), Gaps = 56/205 (27%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           + ++ G + GIG    K L     +  ++                       D+     T
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQ--IVGIDIRDAEVIA------------DL----ST 44

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            E   +A A  + +    ++ L+  +G+     VL                   VN  G 
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLG--------------NVVSVNYFGA 90

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVA---------------------NLSARVGSIGDNR 188
             ++    P LK G       ++ VA                        A V   G+  
Sbjct: 91  TELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ- 149

Query: 189 LGGWHSYRASKAALNQ-CKILAMDF 212
            GG  +Y  SK AL    +  A  +
Sbjct: 150 -GGNLAYAGSKNALTVAVRKRAAAW 173

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 48.3 bits (116), Expect = 4e-07
 Identities = 35/179 (19%), Positives = 80/179 (44%), Gaps = 26/179 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQ 85
           +G  +L+ G++RGIG  FA+  +    +G  +A    +   A                +Q
Sbjct: 7   EGKSALITGSARGIGRAFAEAYVR---EGATVAIADIDIERARQAAA---EIGPAAYAVQ 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVEKSSLMLAYEV 144
           +D+T + +I+A+  +  E  G L++L+N + +  +  +++    +  K+        + +
Sbjct: 61  MDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKL--------FAI 112

Query: 145 NAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N  G +  ++  +  ++  G  G       + N++++ G  G+        Y A+KAA+
Sbjct: 113 NVAGTLFTLQAAARQMIAQGRGG------KIINMASQAGRRGE---ALVAIYCATKAAV 162

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 47.9 bits (115), Expect = 5e-07
 Identities = 50/200 (25%), Positives = 75/200 (37%), Gaps = 30/200 (15%)

Query: 22  ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIAT-CRNPNGATGLLDLKNRFPE 79
           A+   KG V+LV GASRGIG   AK+L      G  V          A   +        
Sbjct: 1   ANSMLKGKVALVTGASRGIGRAIAKRLAND---GALVAIHYGNRKEEAEETVYEIQSNGG 57

Query: 80  RLDVLQLDLTVESTIEASAKSIKEK------YGSLNLLINASGILSIPNVLQPETTLNKV 133
               +  +L     +EA   S+  +          ++LIN +GI   P     ETT    
Sbjct: 58  SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG--PGAFIEETTEQFF 115

Query: 134 EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH 193
           ++   M++  VNA  P  +I+     L+     I        N+S+    I    L  + 
Sbjct: 116 DR---MVS--VNAKAPFFIIQQALSRLRDNSRII--------NISSAATRIS---LPDFI 159

Query: 194 SYRASKAALNQC-KILAMDF 212
           +Y  +K A+N     LA   
Sbjct: 160 AYSMTKGAINTMTFTLAKQL 179

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 47.5 bits (114), Expect = 6e-07
 Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 11/93 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
           K    L+ GA+ GIG    +   +   +G  ++A            + +          +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAK---EGARLVACDIEEGPLREAAEAVGAH------PV 54

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            +D+   +++E          G L+ +++ +GI
Sbjct: 55  VMDVADPASVERGFAEALAHLGRLDGVVHYAGI 87

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 47.5 bits (114), Expect = 6e-07
 Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 7/92 (7%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G   LV GA+ GIG            +G  ++A  R        +            + 
Sbjct: 5   SGKTILVTGAASGIGRAALDLFAR---EGASLVAVDREERLLAEAVA---ALEAEAIAVV 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D++    +EA      E++G L+ + + +G+
Sbjct: 59  ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGV 90

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 47.5 bits (114), Expect = 7e-07
 Identities = 26/178 (14%), Positives = 59/178 (33%), Gaps = 31/178 (17%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
           ++LV  A    G    + L +    G  V+    +   A        R     +      
Sbjct: 3   IALVTHARHFAGPAAVEALTQ---DGYTVVCHDASFADAA------ERQRFESENPGTIA 53

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGI----LSIPNVLQPETTLNKVEKSSLMLAYEV 144
             E   E    +  +   +++ +++   I      +P     E  + ++        +E 
Sbjct: 54  LAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQM--------FEA 105

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            ++ PIL+++     L+  G       +V+  +++ VG            Y  ++AA 
Sbjct: 106 LSIFPILLLQSAIAPLRAAGGA-----SVI-FITSSVGKKPL---AYNPLYGPARAAT 154

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 47.5 bits (114), Expect = 7e-07
 Identities = 44/194 (22%), Positives = 70/194 (36%), Gaps = 34/194 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDVL 84
            G  + V GA  GIGLE  +        G  +I   R           L          +
Sbjct: 10  DGACAAVTGAGSGIGLEICRAFAA---SGARLILIDREAAALDRAAQELGAA---VAARI 63

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYE 143
             D+T    + A+A    E    +++L+N++GI      +   + T  +V          
Sbjct: 64  VADVTDAEAMTAAAAEA-EAVAPVSILVNSAGIARLHDALETDDATWRQV--------MA 114

Query: 144 VNAVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
           VN  G         + M          + R    + NL +  G+I  NR     SY ASK
Sbjct: 115 VNVDGMFWASRAFGRAM----------VARGAGAIVNLGSMSGTIV-NRPQFASSYMASK 163

Query: 200 AALNQC-KILAMDF 212
            A++Q  + LA ++
Sbjct: 164 GAVHQLTRALAAEW 177

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 47.2 bits (113), Expect = 8e-07
 Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 10/89 (11%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
            ++V       G+  A +L E    G  V     +      L      +       QL  
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEA---GHTVACHDESFKQKDELEAFAETY------PQLKP 53

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGI 117
             E       +++   YG +++L++    
Sbjct: 54  MSEQEPAELIEAVTSAYGQVDVLVSNDIF 82

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 9/97 (9%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-----LKNRFPER 80
           +G V++V G + GIG    K+LLE    G  V+   R         D     L      R
Sbjct: 17  QGQVAIVTGGATGIGKAIVKELLE---LGSNVVIASRKLERLKSAADELQANLPPTKQAR 73

Query: 81  LDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           +  +Q ++  E  +    KS  + +G +N L+N  G 
Sbjct: 74  VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG 110

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 46.7 bits (112), Expect = 1e-06
 Identities = 41/189 (21%), Positives = 74/189 (39%), Gaps = 30/189 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  +LV GA +GIG +  K L      G  V+A  R  +    L           + + 
Sbjct: 6   SGLRALVTGAGKGIGRDTVKALHA---SGAKVVAVTRTNSDLVSLAKECPGI----EPVC 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           +DL      E +        G ++LL+N + +     ++QP   + K           VN
Sbjct: 59  VDLGDWDATEKAL----GGIGPVDLLVNNAAL----VIMQPFLEVTKEAFDRSF---SVN 107

Query: 146 AVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
                 V + ++  ++  G  G     ++V N+S+ V  +    L    +Y ++K A+  
Sbjct: 108 LRSVFQVSQMVARDMINRGVPG-----SIV-NVSSMVAHVTFPNLI---TYSSTKGAMTM 158

Query: 205 -CKILAMDF 212
             K +AM+ 
Sbjct: 159 LTKAMAMEL 167

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 46.8 bits (112), Expect = 1e-06
 Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 12/100 (12%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-------LKNRFP 78
           +  ++LV GA  GIG   + +L     +G  V A   +   A   +         +    
Sbjct: 6   RSALALVTGAGSGIGRAVSVRLAG---EGATVAACDLDRAAAQETVRLLGGPGSKEGPPR 62

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGS-LNLLINASGI 117
                 Q D++         + ++  +    +++++ +GI
Sbjct: 63  GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI 102

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 46.3 bits (111), Expect = 2e-06
 Identities = 42/192 (21%), Positives = 71/192 (36%), Gaps = 36/192 (18%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G   LV GA +GIG    + L      G  V+A  R       L+          + + 
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHA---TGARVVAVSRTQADLDSLVRECPGI----EPVC 58

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           +DL      E +        G ++LL+N + +     +LQP   + K          EVN
Sbjct: 59  VDLGDWEATERAL----GSVGPVDLLVNNAAV----ALLQPFLEVTKEAFDRSF---EVN 107

Query: 146 AVGPIL----VIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
               I     V + +   +  G  G     A+V N+S++              Y ++K A
Sbjct: 108 LRAVIQVSQIVARGL---IARGVPG-----AIV-NVSSQCSQRAVTNHS---VYCSTKGA 155

Query: 202 LNQ-CKILAMDF 212
           L+   K++A++ 
Sbjct: 156 LDMLTKVMALEL 167

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 33/179 (18%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
            +LV G + G+G   A  L     +G  +           +LDL  R  E L  ++ D+T
Sbjct: 4   SALVTGGASGLGRAAALALKA---RGYRVV----------VLDL-RREGEDLIYVEGDVT 49

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL---MLAYEVNA 146
            E  +  +    +E+   L  +++A+G+         E  L K     L       EVN 
Sbjct: 50  REEDVRRAVARAQEE-APLFAVVSAAGV------GLAEKILGKEGPHGLESFRRVLEVNL 102

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLS---ARVGSIGDNRLGGWHSYRASKAAL 202
           +G   V++  +  ++      E    V+ N +   A  G IG        +Y ASK  +
Sbjct: 103 LGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQA------AYAASKGGV 155

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 37/180 (20%), Positives = 67/180 (37%), Gaps = 23/180 (12%)

Query: 27  KGGVSLVQGAS-RGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPERLDV 83
           KG V LV  A+  GIG   A++ L +   G  V+ +  +        D L +    R++ 
Sbjct: 21  KGKVVLVTAAAGTGIGSTTARRALLE---GADVVISDYHERRLGETRDQLADLGLGRVEA 77

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
           +  D+T    ++A      EK G L++L+N +G+         +T +  +          
Sbjct: 78  VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL-------GGQTPVVDMTDEEWDRVLN 130

Query: 144 VNAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           V     +   +        V   G      V+ N ++ +G            Y A+KA +
Sbjct: 131 VTLTSVMRATRAALRYFRGVDHGG------VIVNNASVLGWRAQ---HSQSHYAAAKAGV 181

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 45.6 bits (109), Expect = 3e-06
 Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 37/187 (19%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDV 83
           +G V+L+ GAS GIG   A+ L  +     V    R       L  L +       ++ V
Sbjct: 6   QGKVALITGASSGIGEATARALAAEGAA--VAIAARR---VEKLRALGDELTAAGAKVHV 60

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL----- 138
           L+LD+     ++A+  S  E  G L++L+N +GI+           L  VE +       
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIML----------LGPVEDADTTDWTR 110

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRA 197
           M   + N +G + + +   P L        R    V      + SI G   +     Y+A
Sbjct: 111 M--IDTNLLGLMYMTRAALPHLL-------RSKGTVVQ----MSSIAGRVNVRNAAVYQA 157

Query: 198 SKAALNQ 204
           +K  +N 
Sbjct: 158 TKFGVNA 164

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 32/197 (16%), Positives = 57/197 (28%), Gaps = 40/197 (20%)

Query: 29  GVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNG-----------ATGLLDLKNR 76
            V  + G++ GIG    + L      G  VI   R                T +  + +R
Sbjct: 2   SVIAITGSASGIGAALKELLAR---AGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDR 58

Query: 77  FPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
               LD L     V  T              L + +N  G+ ++ + L    +  +    
Sbjct: 59  CGGVLDGLVCCAGVGVT---------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPA- 108

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYR 196
               A  V ++          P+++    G        A         G        +Y 
Sbjct: 109 ----AVIVGSIAATQPGAAELPMVEAMLAGD------EARAIELAEQQG----QTHLAYA 154

Query: 197 ASKAALNQ-CKILAMDF 212
            SK A+    +   +D+
Sbjct: 155 GSKYAVTCLARRNVVDW 171

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 44.9 bits (107), Expect = 6e-06
 Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 26/179 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD-LKNRFPE-RLDV 83
           KG  +LV G++ GIG   A  L+    +G  V+   R        +  ++ ++P+  L  
Sbjct: 9   KGKTALVTGSTAGIGKAIATSLVA---EGANVLINGRREENVNETIKEIRAQYPDAILQP 65

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
           +  DL  E   +     + EKY  +++LIN  GI               +        +E
Sbjct: 66  VVADLGTEQGCQD----VIEKYPKVDILINNLGI-------FEPVEYFDIPDEDWFKLFE 114

Query: 144 VNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           VN +  + + +     +     G  R    V  +++    +          Y A+K   
Sbjct: 115 VNIMSGVRLTRSYLKKMIERKEG--R----VIFIASEAAIMP---SQEMAHYSATKTMQ 164

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 28/182 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
            G  ++V GA  GIG   A         G  V+A  R         ++ +      + + 
Sbjct: 30  AGRTAVVTGAGSGIGRAIAHGYARA---GAHVLAWGRTDGVKEVADEIADG-GGSAEAVV 85

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI-LSIPNVLQPETTLNKVEKSSLMLAYEV 144
            DL         A+ +      +++L+N +GI    P          +V          V
Sbjct: 86  ADLADLEGAANVAEELAA-TRRVDVLVNNAGIIARAPAEEVSLGRWREV--------LTV 136

Query: 145 NAVGPILVIKHMSPLLKVGGTG--IERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
           N     ++ +     +   G+G  +      +A++ +  G           +Y ASK A+
Sbjct: 137 NLDAAWVLSRSFGTAMLAHGSGRIVT-----IASMLSFQGGRNV------AAYAASKHAV 185

Query: 203 NQ 204
             
Sbjct: 186 VG 187

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 39/195 (20%), Positives = 72/195 (36%), Gaps = 38/195 (19%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIAT--CRNPNGATGLLDLKNRFPERLD- 82
           +G V+ V GA+RG G   A +L +   +G  +IA   C+          +    PE L  
Sbjct: 10  EGKVAFVTGAARGQGRSHAVRLAQ---EGADIIAVDICKPIRAGVVDTAIPASTPEDLAE 66

Query: 83  -------------VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVL--QPE 127
                          ++D+     ++A+  S  E+ G L++++  +GI +  + L    E
Sbjct: 67  TADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSE 126

Query: 128 TTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187
               ++         ++N  G    +K   P +  GG G       +   S+  G     
Sbjct: 127 EDWTEM--------IDINLAGVWKTVKAGVPHMIAGGRG-----GSIILTSSVGGLKAY- 172

Query: 188 RLGGWHSYRASKAAL 202
                  Y A+K  +
Sbjct: 173 --PHTGHYVAAKHGV 185

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 10/106 (9%)

Query: 17  TSSASASVKW----KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72
            + ++    W     G V++V GA+RGIG   A+        G  +        A  L  
Sbjct: 198 AADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFAR---DGATVVAIDVDGAAEDLKR 254

Query: 73  LKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG-SLNLLINASGI 117
           + ++       L LD+T +  ++     + E +G  +++L+N +GI
Sbjct: 255 VADKVGGT--ALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI 298

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 42.5 bits (101), Expect = 3e-05
 Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 35/177 (19%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQ 85
           +    LV  ASRGIG   A  L +   +G  V    RN               E L    
Sbjct: 18  RDKGVLVLAASRGIGRAVADVLSQ---EGAEVTICARN--------------EELLKRSG 60

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
               V   +      + EK   +++L+  +G    P         +++       A +  
Sbjct: 61  HRYVVCD-LRKDLDLLFEKVKEVDILVLNAG---GP----KAGFFDELTNEDFKEAIDSL 112

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            +  I ++++  P +K  G G  R    +  +++         L    +  +++ AL
Sbjct: 113 FLNMIKIVRNYLPAMKEKGWG--R----IVAITSFSVISPIENLY---TSNSARMAL 160

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 42.5 bits (101), Expect = 3e-05
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 13/89 (14%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDL 88
            +LV G SRGIG   A+ L+    +G  V    RNP  A   L            L  DL
Sbjct: 4   KALVTGGSRGIGRAIAEALVA---RGYRVAIASRNPEEAAQSLGAV--------PLPTDL 52

Query: 89  TVESTIEASAKSIKEKYGSLNLLINASGI 117
             +   +   K   E  G L++L++A+ +
Sbjct: 53  EKDD-PKGLVKRALEALGGLHVLVHAAAV 80

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 31/188 (16%), Positives = 61/188 (32%), Gaps = 28/188 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQL-----------LEKNDKGCVIATCRNPNGATGLLDLKN 75
           +G V+ + GA+RG G   A ++           +      CV     +P+  +  + L  
Sbjct: 10  EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE 69

Query: 76  RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PETTLNKVE 134
               R+    +D      +           G L++++  +G+ +              V 
Sbjct: 70  AANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDV- 128

Query: 135 KSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS 194
                   ++N  G    +   +P +  GG G       +  +S+  G            
Sbjct: 129 -------MDINVTGTWNTVMAGAPRIIEGGRG-----GSIILISSAAGMKMQ---PFMIH 173

Query: 195 YRASKAAL 202
           Y ASK A+
Sbjct: 174 YTASKHAV 181

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 45/194 (23%), Positives = 65/194 (33%), Gaps = 42/194 (21%)

Query: 22  ASVKWKGGVSLVQGASRGIG----LEFAKQ--------LLEKNDKGCVIATCRNPNGATG 69
            S K KG   L+ G   GIG    + FAK+        L E+ D            G   
Sbjct: 41  GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK-EGVKC 99

Query: 70  LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETT 129
           +L            L  DL+ E   +   +    + GSLN+L+N            P+  
Sbjct: 100 VL------------LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQ------QYPQQG 141

Query: 130 LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL 189
           L  +    L   + +N      V K     LK G   I        N ++ V   G+  L
Sbjct: 142 LEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVII--------NTASIVAYEGNETL 193

Query: 190 GGWHSYRASKAALN 203
                Y A+K A+ 
Sbjct: 194 ---IDYSATKGAIV 204

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 34/194 (17%), Positives = 64/194 (32%), Gaps = 35/194 (18%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEK------NDKGCVIATCRNPNGATGLLDLKNRFPER 80
           +  V LV G +RG G   A +L E+       D    I T   P   +  L+      E+
Sbjct: 9   QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK 68

Query: 81  LDV----LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
                   ++D+   + +     +   ++G L++++  +GI      L     +      
Sbjct: 69  TGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICP----LGAHLPVQAFAD- 123

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG--------DNR 188
                  V+ VG I  +    P L  G        +++    +  G I           +
Sbjct: 124 --AFD--VDFVGVINTVHAALPYLTSGA-------SII-TTGSVAGLIAAAQPPGAGGPQ 171

Query: 189 LGGWHSYRASKAAL 202
             G   Y  +K  +
Sbjct: 172 GPGGAGYSYAKQLV 185

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 37/189 (19%), Positives = 66/189 (34%), Gaps = 30/189 (15%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEK------NDKGCVIATCRNPNGATGLLDLKNRFPER 80
           +G V+ + GA+RG G   A  L  +       D    +   + P      L    R  E 
Sbjct: 27  EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA 86

Query: 81  LDV----LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ--PETTLNKVE 134
           L       Q+D+     ++A+      + G L++++  + + S    L      T   + 
Sbjct: 87  LGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM- 145

Query: 135 KSSLMLAYEVNAVGPILVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH 193
                   +VN  G  +  +   P ++     G     ++V   S+  G  G        
Sbjct: 146 -------IDVNLNGAWITARVAIPHIMAGKRGG-----SIV-FTSSIGGLRGA---ENIG 189

Query: 194 SYRASKAAL 202
           +Y ASK  L
Sbjct: 190 NYIASKHGL 198

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 39/187 (20%), Positives = 67/187 (35%), Gaps = 27/187 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEK------NDKGCVIATCRNPNGATGLLDLKNRFPER 80
            G V+ + GA+RG G   A +L          D    IA+   P      L    +  E 
Sbjct: 12  TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED 71

Query: 81  LDV----LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKS 136
           +       Q D+    ++ A+ ++  ++ G L++++  +GI                +  
Sbjct: 72  IGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP------MSAGD---DGW 122

Query: 137 SLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLG-GWHSY 195
             ++   VN  G    IK   P L   GTG       +  +S+  G  G      G   Y
Sbjct: 123 HDVID--VNLTGVYHTIKVAIPTLVKQGTG-----GSIVLISSSAGLAGVGSADPGSVGY 175

Query: 196 RASKAAL 202
            A+K  +
Sbjct: 176 VAAKHGV 182

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 39/195 (20%), Positives = 68/195 (34%), Gaps = 42/195 (21%)

Query: 27  KGGVSLVQGASRGIG----LEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
           +G V+ + GA+RG G    +  A +       G  I  C      +  +      PE LD
Sbjct: 14  QGRVAFITGAARGQGRSHAVRLAAE-------GADIIACDICAPVSASVTYAPASPEDLD 66

Query: 83  --------------VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQ-PE 127
                            LD+  ++ +        E++G L++++  +G+LS   V +  +
Sbjct: 67  ETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTD 126

Query: 128 TTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN 187
              + V          VN  G    ++   P +   G G       +  +S+  G     
Sbjct: 127 EQWDTV--------IGVNLTGTWRTLRATVPAMIEAGNG-----GSIVVVSSSAGLKAT- 172

Query: 188 RLGGWHSYRASKAAL 202
              G   Y ASK  L
Sbjct: 173 --PGNGHYSASKHGL 185

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 39.1 bits (92), Expect = 6e-04
 Identities = 39/195 (20%), Positives = 62/195 (31%), Gaps = 43/195 (22%)

Query: 22  ASVKWKGGVSLVQGASRGIG----LEFAKQ---------LLEKNDKGCVIATCRNPNGAT 68
            S + K   +LV G   GIG    + +A++           E+ D   V A      G  
Sbjct: 43  GSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-CGRK 101

Query: 69  GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPET 128
            +L            L  DL+ ES   +     +E  G L++L   +G            
Sbjct: 102 AVL------------LPGDLSDESFARSLVHKAREALGGLDILALVAGK------QTAIP 143

Query: 129 TLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR 188
            +  +        + VN      + +   PLL  G + I          S+         
Sbjct: 144 EIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASII--------TTSSIQAYQPSPH 195

Query: 189 LGGWHSYRASKAALN 203
           L     Y A+KAA+ 
Sbjct: 196 L---LDYAATKAAIL 207

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	214
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.98
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.98
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.98
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.98
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.98
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.98
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.98
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.98
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.98
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.98
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.98
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.98
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.98
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.98
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.98
1spx_A	278	Short-chain reductase family member (5L265); paral	99.98
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.97
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.97
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.97
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.97
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.97
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.97
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.97
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.97
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.97
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.97
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.97
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.97
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.97
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.97
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.97
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.97
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.97
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.97
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.97
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.97
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.97
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.97
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.97
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.97
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.97
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.97
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.97
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.97
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.97
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.97
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.97
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.97
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.97
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.97
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.97
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.97
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.97
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.97
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.97
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.97
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.97
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.97
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.97
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.97
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.97
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.97
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.97
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.97
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.97
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.97
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.97
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.97
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.97
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.97
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.97
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.97
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.97
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.97
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.97
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.97
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.96
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.96
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.96
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.96
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.96
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.96
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.96
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.96
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.96
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.96
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.96
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.96
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.96
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.96
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.96
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.95
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.95
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.95
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.95
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.95
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.95
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.95
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.95
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.94
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.93
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.93
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.93
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.92
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.92
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.92
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.92
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.92
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.91
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.9
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.89
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.89
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.86
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.85
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.85
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.85
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.84
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.84
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.83
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.83
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.83
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.83
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.83
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.83
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.83
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.82
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.82
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.82
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.82
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.82
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.81
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.81
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.8
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.8
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.8
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.8
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.8
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.8
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.8
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.79
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.79
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.79
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.79
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.78
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.78
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.78
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.77
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.77
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.77
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.77
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.77
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.77
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.77
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.76
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.76
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.76
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.76
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.75
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.75
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.75
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.75
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.74
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.74
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.73
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.73
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.72
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.72
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.71
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.71
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.71
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.7
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.7
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.7
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.7
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.69
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.67
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.67
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.66
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.65
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.65
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.64
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.64
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.64
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.6
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.59
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.58
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.56
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.54
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.53
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.48
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.47
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.46
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.43
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.42
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.41
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.39
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.38
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.37
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.37
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.36
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.34
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.18
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.02
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.0
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.99
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.89
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.87
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.72
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.63
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.57
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.55
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.52
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.5
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.5
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.44
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.44
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.4
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.38
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.3
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.26
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.25
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.24
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.19
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.19
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.17
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.17
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.15
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.1
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.08
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.01
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.99
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.91
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.91
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.89
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.89
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.87
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.85
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.83
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.83
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.82
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.8
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.79
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.79
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.72
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.72
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.71
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.69
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.69
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.68
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.68
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.67
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.64
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.62
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.62
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.6
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.57
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.57
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.53
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.51
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.5
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.49
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.45
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.42
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.42
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.38
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.34
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.24
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.23
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.2
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.16
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.15
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.12
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.12
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.11
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.08
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.05
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.05
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.02
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.02
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.96
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.88
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.85
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.82
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.8
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.79
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.73
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.73
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.71
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.67
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.66
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.65
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.63
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.63
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.62
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.62
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.62
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.61
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.58
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.55
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.55
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.54
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.53
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.49
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.45
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.44
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.42
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.41
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.39
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.36
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.35
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.33
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.32
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.32
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.31
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.29
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.24
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.23
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.22
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.19
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.19
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.18
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.17
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.07
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.96
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.95
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.94
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.94
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	95.94
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.9
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	95.86
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.85
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	95.83
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.81
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	95.78
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.77
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	95.77
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.76
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.72
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	95.72
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.7
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	95.69
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.67
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.67
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.65
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.62
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.61
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.49
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.48
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.47
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.46
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	95.44
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.44
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.4
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.39
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.37
3tl2_A	315	Malate dehydrogenase; center for structural genomi	95.37
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	95.34
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.34
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.34
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.34
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.33
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.31
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.2
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.08
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.07
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.07
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	95.06
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.97
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	94.97
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	94.88
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	94.85
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	94.78
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	94.75
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	94.74
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	94.73
3l07_A	285	Bifunctional protein fold; structural genomics, ID	94.7
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	94.63
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	94.62
4hc4_A	376	Protein arginine N-methyltransferase 6; HRMT1L6, S	94.62
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	94.59
2duw_A	145	Putative COA-binding protein; ligand binding prote	94.57
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	94.56
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	94.55
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	94.52
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	94.48

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.2e-41  Score=271.13  Aligned_cols=172  Identities=20%  Similarity=0.253  Sum_probs=159.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++|+||++|||||++|||+++|++|+++|++  |++++|+++.++++.+.+.+.+.++.+++||++|+++++++++++.+
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~--Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSI--VVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999997  99999999888887777777788999999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      ++|++|+||||||+..      +..++.+.+.|+|++.+++|+.|+|+++|+++|+|++++.|      +|||+||..+.
T Consensus        81 ~~G~iDiLVNNAGi~~------~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~IVnisS~~g~  148 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMD------GVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKG------VIVNTASIAGI  148 (254)
T ss_dssp             HHSCCCEEEECCCCCC------TTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCcccC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEechhhc
Confidence            9999999999999864      35678999999999999999999999999999999988766      99999999999


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+|+.+|||+| .||
T Consensus       149 ~~---~~~~~~Y~asKaal~~ltr~lA~el  175 (254)
T 4fn4_A          149 RG---GFAGAPYTVAKHGLIGLTRSIAAHY  175 (254)
T ss_dssp             CS---SSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCChHHHHHHHHHHHHHHHHHHHh
Confidence            88   688899999999999999999 554

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=8.6e-41  Score=266.31  Aligned_cols=173  Identities=19%  Similarity=0.254  Sum_probs=158.7

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++|+||++|||||++|||+++|++|+++|++  |++.+|+++.+++..+.+.+.+.++.+++||++|+++++++++++.
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~--Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   81 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGAR--VILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLD   81 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999998  9999999988887777777778899999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|+||||||...       ..++.+.++++|++.+++|+.|+|+++|+++|+|++++.+     |+|||+||..+
T Consensus        82 ~~~G~iDiLVNNAG~~~-------~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~-----G~IVnisS~~~  149 (255)
T 4g81_D           82 AEGIHVDILINNAGIQY-------RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSG-----GKIINIGSLTS  149 (255)
T ss_dssp             HTTCCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECCGGG
T ss_pred             HHCCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCC-----CEEEEEeehhh
Confidence            99999999999999875       6789999999999999999999999999999999765332     49999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|++||+|+.+|||+| .||
T Consensus       150 ~~~---~~~~~~Y~asKaal~~ltr~lA~el  177 (255)
T 4g81_D          150 QAA---RPTVAPYTAAKGGIKMLTCSMAAEW  177 (255)
T ss_dssp             TSB---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCchhHHHHHHHHHHHHHHHHHHh
Confidence            888   688899999999999999999 554

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=3e-38  Score=253.83  Aligned_cols=166  Identities=23%  Similarity=0.312  Sum_probs=150.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .+|+||++|||||++|||+++|++|+++|++  |++++|+++.+++.   ..+.+.++..++||++|+++++++++++.+
T Consensus        25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~--V~i~~r~~~~l~~~---~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   99 (273)
T 4fgs_A           25 QRLNAKIAVITGATSGIGLAAAKRFVAEGAR--VFITGRRKDVLDAA---IAEIGGGAVGIQADSANLAELDRLYEKVKA   99 (273)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH---HHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             chhCCCEEEEeCcCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHH---HHHcCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence            4699999999999999999999999999998  99999988765543   334467899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      ++|++|+||||||...       ..++.+.+.++|++.+++|+.|+|+++|+++|+|++.        ++|||++|..+.
T Consensus       100 ~~G~iDiLVNNAG~~~-------~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--------G~IInisS~~~~  164 (273)
T 4fgs_A          100 EAGRIDVLFVNAGGGS-------MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--------SSVVLTGSTAGS  164 (273)
T ss_dssp             HHSCEEEEEECCCCCC-------CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--------EEEEEECCGGGG
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--------CeEEEEeehhhc
Confidence            9999999999999864       6788999999999999999999999999999999763        399999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+|+.+|||+| .||
T Consensus       165 ~~---~~~~~~Y~asKaav~~ltr~lA~El  191 (273)
T 4fgs_A          165 TG---TPAFSVYAASKAALRSFARNWILDL  191 (273)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cC---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            88   688899999999999999999 555

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1e-37  Score=249.34  Aligned_cols=169  Identities=20%  Similarity=0.243  Sum_probs=149.8

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +++|+||++|||||++|||+++|++|+++|++  |++.+|+.+..+..+ .+.+.+.++.+++||++|+++++++++++.
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~--Vv~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~   78 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAI--PVVFARHAPDGAFLD-ALAQRQPRATYLPVELQDDAQCRDAVAQTI   78 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCCHHHHH-HHHHHCTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCcccHHHHH-HHHhcCCCEEEEEeecCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999997  999999987754433 344457789999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +++|++|+||||||+..        ....+.+.++|++.+++|+.++|+++|+++|+|++++ |      +|||+||..+
T Consensus        79 ~~~G~iDiLVNnAGi~~--------~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G------~IVnisS~~~  143 (258)
T 4gkb_A           79 ATFGRLDGLVNNAGVND--------GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-G------AIVNISSKTA  143 (258)
T ss_dssp             HHHSCCCEEEECCCCCC--------CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCTHH
T ss_pred             HHhCCCCEEEECCCCCC--------CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C------eEEEEeehhh
Confidence            99999999999999864        2234778899999999999999999999999997654 4      9999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+|+.+|||+| .||
T Consensus       144 ~~~---~~~~~~Y~asKaav~~ltr~lA~el  171 (258)
T 4gkb_A          144 VTG---QGNTSGYCASKGAQLALTREWAVAL  171 (258)
T ss_dssp             HHC---CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            888   688899999999999999999 444

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=5.6e-38  Score=248.22  Aligned_cols=166  Identities=19%  Similarity=0.244  Sum_probs=147.4

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +++|+||++|||||++|||+++|+.|+++|++  |++.+|+..  ++..+.+.+.+.++.+++||++|+++++++++   
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~--Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~---   76 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAE--VVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT---   76 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST---
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCE--EEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH---
Confidence            47899999999999999999999999999998  999998764  34556666778899999999999998877664   


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                        ++++|+||||||+..       ..++.+.+.++|++.+++|+.|+|+++|+++|+|++++.+     |+|||+||..+
T Consensus        77 --~g~iDiLVNNAGi~~-------~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~-----G~IVnisS~~~  142 (247)
T 4hp8_A           77 --DAGFDILVNNAGIIR-------RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRS-----GKVVNIASLLS  142 (247)
T ss_dssp             --TTCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECCGGG
T ss_pred             --hCCCCEEEECCCCCC-------CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCC-----cEEEEEechhh
Confidence              479999999999875       6788999999999999999999999999999999876533     49999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|++||+|+.+|||+| .||
T Consensus       143 ~~g---~~~~~~Y~asKaav~~ltr~lA~El  170 (247)
T 4hp8_A          143 FQG---GIRVPSYTAAKHGVAGLTKLLANEW  170 (247)
T ss_dssp             TSC---CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC---CCCChHHHHHHHHHHHHHHHHHHHH
Confidence            988   688899999999999999999 555

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=4.9e-37  Score=243.53  Aligned_cols=162  Identities=17%  Similarity=0.159  Sum_probs=146.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|++|||||++|||+++|++|+++|++  |++.+|+++.++++.    +...++.+++||++|+++++++++++.+++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~--V~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDK--VCFIDIDEKRSADFA----KERPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH----TTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----HhcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            489999999999999999999999998  999999876544322    23467899999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|+||||||...       ..++.+.+.++|++.+++|+.|+|+++|.++|+|++++ |      +|||+||..+..+  
T Consensus        76 iDiLVNNAG~~~-------~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G------~IInisS~~~~~~--  139 (247)
T 3ged_A           76 IDVLVNNACRGS-------KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-G------RIINIASTRAFQS--  139 (247)
T ss_dssp             CCEEEECCCCCC-------CCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C------EEEEECCGGGTSC--
T ss_pred             CCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C------cEEEEeecccccC--
Confidence            999999999874       67899999999999999999999999999999998764 4      9999999999888  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          188 RLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                       .++...|++||+|+.+|||+| .||
T Consensus       140 -~~~~~~Y~asKaal~~ltk~lA~el  164 (247)
T 3ged_A          140 -EPDSEAYASAKGGIVALTHALAMSL  164 (247)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence             688899999999999999999 554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=5.3e-36  Score=239.94  Aligned_cols=164  Identities=17%  Similarity=0.263  Sum_probs=144.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++|+||++|||||++|||+++|++|+++|++  |++.+|+..+.          ..+..+++||++|+++++++++++.+
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQ--VLTTARARPEG----------LPEELFVEADLTTKEGCAIVAEATRQ   74 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCE--EEEEESSCCTT----------SCTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCE--EEEEECCchhC----------CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999998  99999976431          12345789999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +++++|+||||||+...     ...++.+.+.++|++.+++|+.++|+++|+++|+|++++.|      +|||+||..+.
T Consensus        75 ~~G~iDilVnnAG~~~~-----~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~Iv~isS~~~~  143 (261)
T 4h15_A           75 RLGGVDVIVHMLGGSSA-----AGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSG------VVVHVTSIQRV  143 (261)
T ss_dssp             HTSSCSEEEECCCCCCC-----CSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCcc-----CCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCc------eEEEEEehhhc
Confidence            99999999999997641     24578899999999999999999999999999999988776      99999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+.  ..+...|++||+|+.+|+|+| .||
T Consensus       144 ~~~--~~~~~~Y~asKaal~~lt~~lA~El  171 (261)
T 4h15_A          144 LPL--PESTTAYAAAKAALSTYSKAMSKEV  171 (261)
T ss_dssp             SCC--TTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCC--CCccHHHHHHHHHHHHHHHHHHHHh
Confidence            873  235789999999999999999 554

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.1e-35  Score=234.55  Aligned_cols=156  Identities=24%  Similarity=0.343  Sum_probs=138.2

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      ++||++|||||++|||+++|++|+++|++  |++.+|+.+.++..      .+.++..++||++|+++++++++    ++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~--Vv~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~~~~~----~~   76 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAE--VVALGLDADGVHAP------RHPRIRREELDITDSQRLQRLFE----AL   76 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSTTSTTSC------CCTTEEEEECCTTCHHHHHHHHH----HC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHhhh------hcCCeEEEEecCCCHHHHHHHHH----hc
Confidence            58999999999999999999999999998  99999998765432      24578899999999999887765    56


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|+||||||+..         +..+.+.++|++.+++|+.|+|+++|+++|+|++++       |+|||+||+.+..+
T Consensus        77 g~iDiLVNNAGi~~---------~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-------G~IVnisS~~~~~~  140 (242)
T 4b79_A           77 PRLDVLVNNAGISR---------DREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-------GSILNIASMYSTFG  140 (242)
T ss_dssp             SCCSEEEECCCCCC---------GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-------EEEEEECCGGGTSC
T ss_pred             CCCCEEEECCCCCC---------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CeEEEEeeccccCC
Confidence            99999999999753         456889999999999999999999999999998654       49999999999988


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                         .++...|++||+|+.+|||+| .||
T Consensus       141 ---~~~~~~Y~asKaav~~ltr~lA~El  165 (242)
T 4b79_A          141 ---SADRPAYSASKGAIVQLTRSLACEY  165 (242)
T ss_dssp             ---CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence               688899999999999999999 555

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.4e-35  Score=237.13  Aligned_cols=172  Identities=23%  Similarity=0.304  Sum_probs=155.1

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++++|++|||||++|||+++|++|+++|++  |++++|+.+.++.+.+.+...+.++.++++|++|+++++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   83 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGAS--VVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAA   83 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            347799999999999999999999999999997  999999987777766666666788999999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++++|+||||||...       ..++ +.+.++|++.+++|+.|++.++++++|+|++++.|      +|||+||..
T Consensus        84 ~~~~g~id~lv~nAg~~~-------~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~  149 (256)
T 3gaf_A           84 LDQFGKITVLVNNAGGGG-------PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGG------AILNISSMA  149 (256)
T ss_dssp             HHHHSCCCEEEECCCCCC-------CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCGG
T ss_pred             HHHcCCCCEEEECCCCCC-------CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcCHH
Confidence            999999999999999875       3455 78899999999999999999999999999887665      999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|+++|+++++|++++ .||
T Consensus       150 ~~~~---~~~~~~Y~asKaa~~~~~~~la~e~  178 (256)
T 3gaf_A          150 GENT---NVRMASYGSSKAAVNHLTRNIAFDV  178 (256)
T ss_dssp             GTCC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HcCC---CCCchHHHHHHHHHHHHHHHHHHHH
Confidence            9887   678899999999999999999 444

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=2.1e-35  Score=235.61  Aligned_cols=171  Identities=18%  Similarity=0.175  Sum_probs=154.4

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|++|||||++|||+++|++|+++|++  |++++|+.+.++++.+.+.+.+.++.+++||++|+++++++++++.
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFT--VFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAAD   79 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCE--EEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHH
Confidence            35788999999999999999999999999997  9999999988887777776667889999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +. +++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.|      +|||+||..+
T Consensus        80 ~~-g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~  145 (252)
T 3h7a_A           80 AH-APLEVTIFNVGANV-------NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQG------KIFFTGATAS  145 (252)
T ss_dssp             HH-SCEEEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEEEGGG
T ss_pred             hh-CCceEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECCHHH
Confidence            99 99999999999875       5678889999999999999999999999999999887655      9999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|++||+|+++|+++| .||
T Consensus       146 ~~~---~~~~~~Y~asKaa~~~l~~~la~e~  173 (252)
T 3h7a_A          146 LRG---GSGFAAFASAKFGLRAVAQSMAREL  173 (252)
T ss_dssp             TCC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCCccHHHHHHHHHHHHHHHHHHh
Confidence            888   688899999999999999999 444

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-35  Score=235.85  Aligned_cols=172  Identities=21%  Similarity=0.335  Sum_probs=153.8

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC-CceeEEEecCCCHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .+++++|++|||||++|||+++|++|+++|++  |++.+|+.+.++...+.+...+ .++.+++||++|+++++++++++
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGAN--VAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            36789999999999999999999999999997  9999999887776555555544 58999999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++++|+||||||...       ..++.+.+.++|++.+++|+.++++++++++|+|++++.|      +|||+||..
T Consensus        83 ~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~  149 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFP-------DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSG------RVVLTSSIT  149 (262)
T ss_dssp             HHHHSCCSEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSC------EEEEECCSB
T ss_pred             HHHhCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEechh
Confidence            999999999999999874       5678889999999999999999999999999999887765      999999998


Q ss_pred             cc-CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GS-IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~-~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +. .+   .++...|+++|+++++|++++ .||
T Consensus       150 ~~~~~---~~~~~~Y~asK~a~~~l~~~la~e~  179 (262)
T 3pk0_A          150 GPITG---YPGWSHYGATKAAQLGFMRTAAIEL  179 (262)
T ss_dssp             TTTBC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccCC---CCCChhhHHHHHHHHHHHHHHHHHH
Confidence            86 55   578899999999999999999 443

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=2.7e-35  Score=237.42  Aligned_cols=172  Identities=16%  Similarity=0.276  Sum_probs=156.2

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++++||++|||||++|||+++|++|+++|++  |++.+|+++.+++..+.+...+.++.++++|++|+++++++++++.
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGAR--ILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  9999999887777666666667789999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++++++|+|++++.|      +|||+||..+
T Consensus        99 ~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iV~isS~~~  165 (271)
T 4ibo_A           99 EQGIDVDILVNNAGIQF-------RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYG------KIVNIGSLTS  165 (271)
T ss_dssp             HHTCCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGG
T ss_pred             HHCCCCCEEEECCCCCC-------CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEccHHh
Confidence            99999999999999874       5678889999999999999999999999999999887665      9999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+++++|++++ .||
T Consensus       166 ~~~---~~~~~~Y~asKaa~~~l~~~la~e~  193 (271)
T 4ibo_A          166 ELA---RATVAPYTVAKGGIKMLTRAMAAEW  193 (271)
T ss_dssp             TSB---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC---CCCchhHHHHHHHHHHHHHHHHHHH
Confidence            887   678899999999999999999 444

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=6.5e-35  Score=236.65  Aligned_cols=176  Identities=22%  Similarity=0.267  Sum_probs=150.2

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC----------------CcccccchhhcCCCceeEE
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN----------------GATGLLDLKNRFPERLDVL   84 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~----------------~~~~~~~~~~~~~~~~~~~   84 (214)
                      ++..++++|++|||||++|||+++|++|+++|++  |++++|+..                .++++.+.+...+.++.++
T Consensus         4 ~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (286)
T 3uve_A            4 SMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGAD--IIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTA   81 (286)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEE
T ss_pred             CCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEE
Confidence            3446789999999999999999999999999997  999988732                2222333444556789999


Q ss_pred             EecCCCHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC
Q 028056           85 QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG  164 (214)
Q Consensus        85 ~~Dl~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~  164 (214)
                      +||++|+++++++++++.+.++++|+||||||...      ...++.+.+.++|++.+++|+.|+++++++++|+|++++
T Consensus        82 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~  155 (286)
T 3uve_A           82 EVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGN------GGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGG  155 (286)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC------CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             EcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccC------CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999865      233578899999999999999999999999999998765


Q ss_pred             CCCCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          165 TGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       165 ~~~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+     ++|||+||..+..+   .++...|+++|+++++|+++| .||
T Consensus       156 ~~-----g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~  196 (286)
T 3uve_A          156 RG-----GSIILTSSVGGLKA---YPHTGHYVAAKHGVVGLMRAFGVEL  196 (286)
T ss_dssp             SC-----EEEEEECCGGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC-----cEEEEECchhhccC---CCCccHHHHHHHHHHHHHHHHHHHh
Confidence            32     49999999999887   688899999999999999999 444

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=6.3e-35  Score=234.39  Aligned_cols=172  Identities=19%  Similarity=0.228  Sum_probs=153.7

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-CCC-ceeEEEecCCCHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPE-RLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .+++++|++|||||++|||+++|++|+++|++  |++++|+.+.++...+.+.. .+. ++.+++||++|++++++++++
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAA--VAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEA   80 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHH
Confidence            46789999999999999999999999999997  99999998776665554443 344 589999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++++++.++|+|++++.|      +|||+||.
T Consensus        81 ~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~  147 (265)
T 3lf2_A           81 CERTLGCASILVNNAGQGR-------VSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADA------AIVCVNSL  147 (265)
T ss_dssp             HHHHHCSCSEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTE------EEEEEEEG
T ss_pred             HHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe------EEEEECCc
Confidence            9999999999999999864       5678889999999999999999999999999999887665      99999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+..+   .++...|+++|+|+++|++++ .||
T Consensus       148 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  177 (265)
T 3lf2_A          148 LASQP---EPHMVATSAARAGVKNLVRSMAFEF  177 (265)
T ss_dssp             GGTSC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCC---CCCchhhHHHHHHHHHHHHHHHHHh
Confidence            99888   688899999999999999999 444

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=7.2e-35  Score=233.08  Aligned_cols=173  Identities=14%  Similarity=0.251  Sum_probs=151.5

Q ss_pred             ccccCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC-CceeEEEecCCCHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        24 ~~l~~k~vlItG~s~--giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ++|+||++|||||+|  |||+++|++|+++|++  |++.+|+++.++++.+.+.+.+ .++.+++||++|++++++++++
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~--Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAK--LVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHH
Confidence            689999999999875  9999999999999997  9999999888777777666554 4799999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.++++++|+||||||+....   ....++.+.+.++|...+++|+.+++.+++.+.+++++.        |+|||+||.
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~---~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--------G~IVnisS~  148 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANME---DLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEG--------GSIVATTYL  148 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGG---GGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTC--------EEEEEEECG
T ss_pred             HHHHhCCCCEEEecccccccc---ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC--------CEEEEEecc
Confidence            999999999999999986411   123456788899999999999999999999998877543        499999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+..+   .+++..|++||+|+.+|+|+| .||
T Consensus       149 ~~~~~---~~~~~~Y~asKaal~~ltr~lA~El  178 (256)
T 4fs3_A          149 GGEFA---VQNYNVMGVAKASLEANVKYLALDL  178 (256)
T ss_dssp             GGTSC---CTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccC---cccchhhHHHHHHHHHHHHHHHHHh
Confidence            99888   688999999999999999999 554

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=4.2e-35  Score=237.24  Aligned_cols=176  Identities=20%  Similarity=0.301  Sum_probs=152.9

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCC---ceeEEEecCCCHHHHHH
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQLDLTVESTIEA   96 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~v~~   96 (214)
                      ..+.+++++|++|||||++|||+++|++|+++|++  |++++|+++.++...+.+.+.+.   ++.++++|++|++++++
T Consensus         3 ~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~   80 (281)
T 3svt_A            3 GSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAS--VMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETAR   80 (281)
T ss_dssp             -----CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHH
T ss_pred             CCCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHH
Confidence            34567889999999999999999999999999997  99999998777665555554444   78999999999999999


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      +++++.+.++++|+||||||...      ...++.+.+.++|++.+++|+.|+++++++++|+|++++.|      +|||
T Consensus        81 ~~~~~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~iv~  148 (281)
T 3svt_A           81 AVDAVTAWHGRLHGVVHCAGGSE------NIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGG------SFVG  148 (281)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE------EEEE
T ss_pred             HHHHHHHHcCCCCEEEECCCcCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEE
Confidence            99999999999999999999743      35678899999999999999999999999999999887665      9999


Q ss_pred             eecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          177 LSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       177 iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +||..+..+   .++...|++||+++++|++++ .||
T Consensus       149 isS~~~~~~---~~~~~~Y~asK~a~~~l~~~la~e~  182 (281)
T 3svt_A          149 ISSIAASNT---HRWFGAYGVTKSAVDHLMQLAADEL  182 (281)
T ss_dssp             ECCHHHHSC---CTTCTHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCHHHcCC---CCCChhHHHHHHHHHHHHHHHHHHh
Confidence            999998887   577889999999999999999 444

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6.9e-35  Score=234.05  Aligned_cols=170  Identities=16%  Similarity=0.235  Sum_probs=153.9

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ...+++|++|||||++|||+++|++|+++|++  |++.+|+.+.++++.+.+.+.+.++.+++||++|+++++++++++.
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (264)
T 3ucx_A            6 GGLLTDKVVVISGVGPALGTTLARRCAEQGAD--LVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETM   83 (264)
T ss_dssp             -CTTTTCEEEEESCCTTHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCcCCcEEEEECCCcHHHHHHHHHHHHCcCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999997  9999999887777666666667889999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|+||||||...      ...++.+.+.++|++.+++|+.++++++++++|+|++++ |      +|||+||..+
T Consensus        84 ~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g------~iv~isS~~~  150 (264)
T 3ucx_A           84 KAYGRVDVVINNAFRVP------SMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-G------AVVNVNSMVV  150 (264)
T ss_dssp             HHTSCCSEEEECCCSCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-C------EEEEECCGGG
T ss_pred             HHcCCCcEEEECCCCCC------CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-C------EEEEECcchh
Confidence            99999999999999863      356788999999999999999999999999999998754 4      9999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .+++..|+++|+++++|+++++
T Consensus       151 ~~~---~~~~~~Y~asKaa~~~~~~~la  175 (264)
T 3ucx_A          151 RHS---QAKYGAYKMAKSALLAMSQTLA  175 (264)
T ss_dssp             GCC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             ccC---CCccHHHHHHHHHHHHHHHHHH
Confidence            887   6788999999999999999994

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=8.2e-35  Score=235.08  Aligned_cols=174  Identities=17%  Similarity=0.231  Sum_probs=150.1

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-------------CCcccccchhhcCCCceeEEEecC
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-------------NGATGLLDLKNRFPERLDVLQLDL   88 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~-------------~~~~~~~~~~~~~~~~~~~~~~Dl   88 (214)
                      +..++++|++|||||++|||+++|++|+++|++  |++++|+.             +.+++..+.+...+.++.++.+|+
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   82 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGAD--IIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDT   82 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCE--EEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC
Confidence            345789999999999999999999999999997  88888842             222333344455567899999999


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCC
Q 028056           89 TVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIE  168 (214)
Q Consensus        89 ~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~  168 (214)
                      +|+++++++++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++++++|+|++++.+  
T Consensus        83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~--  153 (277)
T 3tsc_A           83 RDFDRLRKVVDDGVAALGRLDIIVANAGVAA-------PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRG--  153 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC--
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC--
Confidence            9999999999999999999999999999875       4678899999999999999999999999999999876532  


Q ss_pred             CCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          169 RDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       169 ~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                         ++|||+||..+..+   .++...|++||+++++|+++| .||
T Consensus       154 ---g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~  192 (277)
T 3tsc_A          154 ---GSIILISSAAGMKM---QPFMIHYTASKHAVTGLARAFAAEL  192 (277)
T ss_dssp             ---EEEEEECCGGGTSC---CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CEEEEEccHhhCCC---CCCchhhHHHHHHHHHHHHHHHHHh
Confidence               49999999999887   688899999999999999999 444

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=9.8e-35  Score=237.18  Aligned_cols=178  Identities=21%  Similarity=0.261  Sum_probs=151.0

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC------------CcccccchhhcCCCceeEEEe
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------------GATGLLDLKNRFPERLDVLQL   86 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~------------~~~~~~~~~~~~~~~~~~~~~   86 (214)
                      |..+..++++|++|||||++|||+++|++|+++|++  |++++|+++            .+++..+.+...+.++.+++|
T Consensus        19 p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (299)
T 3t7c_A           19 PGSMAGKVEGKVAFITGAARGQGRSHAITLAREGAD--IIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQV   96 (299)
T ss_dssp             ---CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEEC
Confidence            444456789999999999999999999999999997  998888732            223333444555778999999


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCC
Q 028056           87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTG  166 (214)
Q Consensus        87 Dl~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  166 (214)
                      |++|+++++++++++.+.++++|+||||||...      +..++.+.+.++|++.+++|+.|+++++++++|+|.+++.+
T Consensus        97 Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~  170 (299)
T 3t7c_A           97 DVRDFDAMQAAVDDGVTQLGRLDIVLANAALAS------EGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRG  170 (299)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSC
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC------CCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999875      23347889999999999999999999999999998776532


Q ss_pred             CCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          167 IERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       167 ~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                           ++|||+||..+..+   .++...|++||+|+++|+++| .||
T Consensus       171 -----g~Iv~isS~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  209 (299)
T 3t7c_A          171 -----GSIVFTSSIGGLRG---AENIGNYIASKHGLHGLMRTMALEL  209 (299)
T ss_dssp             -----EEEEEECCGGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cEEEEECChhhccC---CCCcchHHHHHHHHHHHHHHHHHHh
Confidence                 49999999999887   688899999999999999999 444

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=9.7e-35  Score=235.70  Aligned_cols=174  Identities=16%  Similarity=0.227  Sum_probs=151.0

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-------ccchhhcCCCceeEEEecCCCHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-------LLDLKNRFPERLDVLQLDLTVESTI   94 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~~~~~v   94 (214)
                      ..|++++|++|||||++|||+++|++|+++|++  |++++|+.+..+.       ..+.+...+.++.+++||++|++++
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   80 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGAN--VALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAV   80 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCE--EEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            357899999999999999999999999999997  9999999875433       2333444467899999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEE
Q 028056           95 EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVV  174 (214)
Q Consensus        95 ~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~i  174 (214)
                      +++++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.+      +|
T Consensus        81 ~~~~~~~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~i  147 (285)
T 3sc4_A           81 AAAVAKTVEQFGGIDICVNNASAIN-------LGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNP------HI  147 (285)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCC-------CCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSC------EE
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EE
Confidence            9999999999999999999999875       5678889999999999999999999999999999887765      99


Q ss_pred             EEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          175 ANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       175 v~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ||+||..+..+.  .++...|++||+++++|+++| .||
T Consensus       148 v~isS~~~~~~~--~~~~~~Y~asKaal~~~~~~la~e~  184 (285)
T 3sc4_A          148 LTLSPPIRLEPK--WLRPTPYMMAKYGMTLCALGIAEEL  184 (285)
T ss_dssp             EECCCCCCCSGG--GSCSHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEECChhhccCC--CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            999999887762  266789999999999999999 444

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.1e-35  Score=237.97  Aligned_cols=176  Identities=23%  Similarity=0.295  Sum_probs=155.0

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      |..+..++++|++|||||++|||+++|++|+++|++  |++++|+++.++++.+.+...+.++.++.+|++|++++++++
T Consensus        19 p~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   96 (270)
T 3ftp_A           19 PGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAM--VIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALV   96 (270)
T ss_dssp             ----CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHH
T ss_pred             CcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHH
Confidence            334456689999999999999999999999999997  999999887777666666555678999999999999999999


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++++++|+|++++.|      +|||+|
T Consensus        97 ~~~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~is  163 (270)
T 3ftp_A           97 ESTLKEFGALNVLVNNAGITQ-------DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGG------RIVNIT  163 (270)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEC
T ss_pred             HHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEEC
Confidence            999999999999999999875       5667888999999999999999999999999999877655      999999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+..+   .++...|+++|+|+++|++++ .||
T Consensus       164 S~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  195 (270)
T 3ftp_A          164 SVVGSAG---NPGQVNYAAAKAGVAGMTRALAREI  195 (270)
T ss_dssp             CHHHHHC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCC---CCCchhHHHHHHHHHHHHHHHHHHH
Confidence            9999887   588899999999999999999 444

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=9.7e-35  Score=235.01  Aligned_cols=171  Identities=20%  Similarity=0.267  Sum_probs=150.1

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-------------CCCcccccchhhcCCCceeEEEecCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-------------PNGATGLLDLKNRFPERLDVLQLDLT   89 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~-------------~~~~~~~~~~~~~~~~~~~~~~~Dl~   89 (214)
                      ..++++|++|||||++|||+++|++|+++|++  |++++|+             .+.++++.+.+...+.++.++++|++
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   87 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGAD--IIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR   87 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence            45789999999999999999999999999997  8888884             22333344455556778999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCC
Q 028056           90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIER  169 (214)
Q Consensus        90 ~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~  169 (214)
                      |+++++++++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++++++.++|+|++++.+   
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~---  157 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVLS-------WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNG---  157 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC---
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC---
Confidence            999999999999999999999999999875       5678899999999999999999999999999999876522   


Q ss_pred             CceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          170 DVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       170 ~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        ++|||+||..+..+   .++...|+++|+++++|+++++
T Consensus       158 --g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~~~~~la  193 (280)
T 3pgx_A          158 --GSIVVVSSSAGLKA---TPGNGHYSASKHGLTALTNTLA  193 (280)
T ss_dssp             --EEEEEECCGGGTSC---CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             --CEEEEEcchhhccC---CCCchhHHHHHHHHHHHHHHHH
Confidence              49999999999887   6888999999999999999994

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=6e-35  Score=234.53  Aligned_cols=167  Identities=20%  Similarity=0.229  Sum_probs=153.2

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +++|++|||||++|||+++|++|+++|++  |++.+|+.+.++.+.+.+...+.++.++.||++|+++++++++++.+.+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAK--ILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999997  9999999887777666666667789999999999999999999999999


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|+||||||...       ..++.+.+.++|++.+++|+.|++++++.++|+|++++.|      +|||+||..+..+
T Consensus        80 g~iD~lVnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~IV~isS~~~~~~  146 (264)
T 3tfo_A           80 GRIDVLVNNAGVMP-------LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSG------QIINIGSIGALSV  146 (264)
T ss_dssp             SCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTCC
T ss_pred             CCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCe------EEEEEcCHHHccc
Confidence            99999999999874       5678899999999999999999999999999999887655      9999999999888


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                         .++...|++||+++++|+++++
T Consensus       147 ---~~~~~~Y~asKaal~~l~~~la  168 (264)
T 3tfo_A          147 ---VPTAAVYCATKFAVRAISDGLR  168 (264)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHH
Confidence               6888999999999999999994

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.2e-34  Score=235.96  Aligned_cols=173  Identities=23%  Similarity=0.371  Sum_probs=154.7

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC-CceeEEEecCCCHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ..+++++|++|||||++|||+++|++|+++|++  |++++|+.+.++...+.+.+.+ .++.+++||++|++++++++++
T Consensus        35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~  112 (293)
T 3rih_A           35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGAN--VAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAART  112 (293)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH
Confidence            346789999999999999999999999999997  9999999888777666665554 5899999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++++++|+|++++.|      +|||+||.
T Consensus       113 ~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iV~isS~  179 (293)
T 3rih_A          113 VVDAFGALDVVCANAGIFP-------EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRG------RVILTSSI  179 (293)
T ss_dssp             HHHHHSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSC------EEEEECCS
T ss_pred             HHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEEeCh
Confidence            9999999999999999874       5677889999999999999999999999999999887765      99999999


Q ss_pred             ccc-CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGS-IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~-~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+. .+   .++...|++||+++++|++++ .||
T Consensus       180 ~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  210 (293)
T 3rih_A          180 TGPVTG---YPGWSHYGASKAAQLGFMRTAAIEL  210 (293)
T ss_dssp             BTTTBB---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccCC---CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            885 55   578899999999999999998 444

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=4.4e-35  Score=235.91  Aligned_cols=172  Identities=24%  Similarity=0.350  Sum_probs=151.6

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ++.+++++|++|||||++|||+++|++|+++|++  |++.+| +.+..+.+.+.+...+.++.++++|++|+++++++++
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~   98 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAK--VAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFA   98 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            3457789999999999999999999999999997  888777 4444555555666667789999999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++++++|+|++++.|      +|||+||
T Consensus        99 ~~~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS  165 (269)
T 4dmm_A           99 AVIERWGRLDVLVNNAGITR-------DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSG------RIINIAS  165 (269)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECC
T ss_pred             HHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECc
Confidence            99999999999999999875       5677889999999999999999999999999999887665      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+..+   .++...|+++|+|+++|+++++
T Consensus       166 ~~~~~~---~~~~~~Y~asK~a~~~l~~~la  193 (269)
T 4dmm_A          166 VVGEMG---NPGQANYSAAKAGVIGLTKTVA  193 (269)
T ss_dssp             HHHHHC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcCC---CCCchhHHHHHHHHHHHHHHHH
Confidence            998887   5788999999999999999994

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.2e-34  Score=231.79  Aligned_cols=171  Identities=18%  Similarity=0.214  Sum_probs=153.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++++|+++.++++.+.+...+.++.+++||++|+++++++++++.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGAR--VVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDE   79 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999998877776666666677899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhc-CCCCCCCCceEEEEeecCcc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~~~~~~~iv~iss~~~  182 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.++++++++++|+|.+ ++.|      +|||+||..+
T Consensus        80 ~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g------~iv~isS~~~  146 (257)
T 3imf_A           80 KFGRIDILINNAAGNF-------ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKG------NIINMVATYA  146 (257)
T ss_dssp             HHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC------EEEEECCGGG
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCc------EEEEECchhh
Confidence            9999999999999764       567889999999999999999999999999999954 3344      9999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc-cc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM-DF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la-~~  212 (214)
                      ..+   .++...|++||+|+++|+++++ ||
T Consensus       147 ~~~---~~~~~~Y~asKaa~~~l~~~la~e~  174 (257)
T 3imf_A          147 WDA---GPGVIHSAAAKAGVLAMTKTLAVEW  174 (257)
T ss_dssp             GSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCcHHHHHHHHHHHHHHHHHHHHh
Confidence            887   6888999999999999999994 44

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-34  Score=235.32  Aligned_cols=174  Identities=22%  Similarity=0.246  Sum_probs=152.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|++|||||++|||+++|++|+++|++  |++++|+.+.++++.+.+...+.++.++++|++|+++++++++++.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVT--VGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            6788999999999999999999999999997  99999998777776666666677899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...      ...++.+.+.++|++.+++|+.|++.++++++|+|++++.|      +|||+||..+.
T Consensus       102 ~~g~iD~lVnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~Iv~isS~~~~  169 (283)
T 3v8b_A          102 KFGHLDIVVANAGING------VWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGG------AIVVVSSINGT  169 (283)
T ss_dssp             HHSCCCEEEECCCCCC------CBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCSBTT
T ss_pred             HhCCCCEEEECCCCCC------CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------eEEEEcChhhc
Confidence            9999999999999864      24678899999999999999999999999999999887655      99999999887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ... +.++...|+++|+|+++|++++ .||
T Consensus       170 ~~~-~~~~~~~Y~asKaa~~~l~~~la~e~  198 (283)
T 3v8b_A          170 RTF-TTPGATAYTATKAAQVAIVQQLALEL  198 (283)
T ss_dssp             TBC-CSTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCC-CCCCchHHHHHHHHHHHHHHHHHHHh
Confidence            621 1577899999999999999999 444

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.3e-34  Score=230.87  Aligned_cols=173  Identities=23%  Similarity=0.282  Sum_probs=153.1

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC-CCceeEEEecC--CCHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDL--TVESTIEASAK   99 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl--~~~~~v~~~~~   99 (214)
                      ...+++|++|||||++|||+++|++|+++|++  |++.+|+++.++...+.+... +.++.++.+|+  +|+++++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGAT--VILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQ   84 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHH
Confidence            35689999999999999999999999999997  999999987766654444333 34788999999  99999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||...      +..++.+.+.++|++.+++|+.|+++++|+++|+|++++.|      +|||+||
T Consensus        85 ~~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS  152 (252)
T 3f1l_A           85 RIAVNYPRLDGVLHNAGLLG------DVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAG------SLVFTSS  152 (252)
T ss_dssp             HHHHHCSCCSEEEECCCCCC------CCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECC
T ss_pred             HHHHhCCCCCEEEECCccCC------CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCC------EEEEECC
Confidence            99999999999999999864      24677889999999999999999999999999999987765      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+   .++...|+++|+++++|++++ .||
T Consensus       153 ~~~~~~---~~~~~~Y~asK~a~~~l~~~la~e~  183 (252)
T 3f1l_A          153 SVGRQG---RANWGAYAASKFATEGMMQVLADEY  183 (252)
T ss_dssp             GGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhhccC---CCCCchhHHHHHHHHHHHHHHHHHh
Confidence            999887   578899999999999999999 454

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1e-34  Score=234.90  Aligned_cols=171  Identities=20%  Similarity=0.265  Sum_probs=150.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC------------cccccchhhcCCCceeEEEecCCCH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG------------ATGLLDLKNRFPERLDVLQLDLTVE   91 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~Dl~~~   91 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++++|++..            ++...+.+...+.++.++++|++|+
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGAD--IAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCe--EEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            5689999999999999999999999999997  9999997432            2223334445577899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCc
Q 028056           92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV  171 (214)
Q Consensus        92 ~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~  171 (214)
                      ++++++++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.|     
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-----  151 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGIST-------IALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYG-----  151 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCC-------CCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-----
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-----
Confidence            9999999999999999999999999874       5677889999999999999999999999999999887655     


Q ss_pred             eEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       172 ~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                       +|||+||..+..+   .++...|+++|+++++|++++ .||
T Consensus       152 -~iv~isS~~~~~~---~~~~~~Y~asK~a~~~~~~~la~e~  189 (281)
T 3s55_A          152 -RIVTVSSMLGHSA---NFAQASYVSSKWGVIGLTKCAAHDL  189 (281)
T ss_dssp             -EEEEECCGGGGSC---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -EEEEECChhhcCC---CCCCchhHHHHHHHHHHHHHHHHHH
Confidence             9999999999887   578899999999999999999 444

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=2.8e-34  Score=231.38  Aligned_cols=173  Identities=21%  Similarity=0.278  Sum_probs=151.6

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .+.+++++|++|||||++|||+++|++|+++|++  |++.+|+++.+++..+.+   +.++.++++|++|++++++++++
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~   78 (271)
T 3tzq_B            4 SMTAELENKVAIITGACGGIGLETSRVLARAGAR--VVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDF   78 (271)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999997  999999988766544333   56789999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|+||||||....     ...++.+.+.++|++.+++|+.|+++++++++|+|++++.|      +|||+||.
T Consensus        79 ~~~~~g~id~lv~nAg~~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iv~isS~  147 (271)
T 3tzq_B           79 TIDTFGRLDIVDNNAAHSDP-----ADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGG------AIVNISSA  147 (271)
T ss_dssp             HHHHHSCCCEEEECCCCCCT-----TCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE------EEEEECCG
T ss_pred             HHHHcCCCCEEEECCCCCCC-----CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEECCH
Confidence            99999999999999998631     14567889999999999999999999999999999887765      99999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+..+   .++...|++||+++++|++++ .||
T Consensus       148 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  177 (271)
T 3tzq_B          148 TAHAA---YDMSTAYACTKAAIETLTRYVATQY  177 (271)
T ss_dssp             GGTSB---CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHcCC---CCCChHHHHHHHHHHHHHHHHHHHH
Confidence            99887   678899999999999999999 443

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=8.2e-35  Score=233.89  Aligned_cols=174  Identities=18%  Similarity=0.325  Sum_probs=154.4

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-CCCceeEEEecCCCHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ..+++++|++|||||++|||+++|++|+++|++  |++.+|+.+.++...+.+.+ .+.++.+++||++|++++++++++
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~   91 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGAR--LVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARR   91 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            346789999999999999999999999999997  99999988776665444433 467899999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|+||||||...       ..++.+.+.++|++.+++|+.++++++++++|+|++++.+     ++|||+||.
T Consensus        92 ~~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-----g~iv~isS~  159 (266)
T 4egf_A           92 AAEAFGGLDVLVNNAGISH-------PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEG-----GAIITVASA  159 (266)
T ss_dssp             HHHHHTSCSEEEEECCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCG
T ss_pred             HHHHcCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----eEEEEEcch
Confidence            9999999999999999875       5677889999999999999999999999999999876532     499999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+..+   .++...|+++|+|+++|++++ .||
T Consensus       160 ~~~~~---~~~~~~Y~asK~a~~~l~~~la~e~  189 (266)
T 4egf_A          160 AALAP---LPDHYAYCTSKAGLVMATKVLAREL  189 (266)
T ss_dssp             GGTSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccC---CCCChHHHHHHHHHHHHHHHHHHHH
Confidence            99887   688899999999999999999 444

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=3.9e-34  Score=231.18  Aligned_cols=176  Identities=18%  Similarity=0.235  Sum_probs=155.7

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++++|++|||||++|||+++|++|+++|++  |++.+|+++.++.+.+.+...+.++.+++||++|+++++++++++
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  103 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQ--VAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQM  103 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999997  999999988877776666666778999999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.+     ++||++||..
T Consensus       104 ~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~-----g~iv~isS~~  171 (276)
T 3r1i_A          104 TGELGGIDIAVCNAGIVS-------VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLG-----GTIITTASMS  171 (276)
T ss_dssp             HHHHSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCGG
T ss_pred             HHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-----cEEEEECchH
Confidence            999999999999999875       5677889999999999999999999999999999877642     4999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+.. .++...|++||+++++|++++ .||
T Consensus       172 ~~~~~~-~~~~~~Y~asKaa~~~l~~~la~e~  202 (276)
T 3r1i_A          172 GHIINI-PQQVSHYCTSKAAVVHLTKAMAVEL  202 (276)
T ss_dssp             GTSCCC-SSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcccCC-CCCcchHHHHHHHHHHHHHHHHHHH
Confidence            876531 246789999999999999999 443

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=6.7e-35  Score=232.14  Aligned_cols=169  Identities=28%  Similarity=0.396  Sum_probs=150.6

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|++|||||++|||+++|++|+++|++  |++.+|+++.++.+.+.+   +.+..++++|++|+++++++++++.
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   78 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDYL---GDNGKGMALNVTNPESIEAVLKAIT   78 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---cccceEEEEeCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999997  999999877655544433   3357889999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++++++|+|++++.|      +|||+||..+
T Consensus        79 ~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~~  145 (248)
T 3op4_A           79 DEFGGVDILVNNAGITR-------DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQG------RIINVGSVVG  145 (248)
T ss_dssp             HHHCCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHH
T ss_pred             HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEEcchhh
Confidence            99999999999999875       5678889999999999999999999999999999887655      9999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+|+++|++++ .||
T Consensus       146 ~~~---~~~~~~Y~asK~a~~~l~~~la~e~  173 (248)
T 3op4_A          146 TMG---NAGQANYAAAKAGVIGFTKSMAREV  173 (248)
T ss_dssp             HHC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCChHHHHHHHHHHHHHHHHHHHH
Confidence            887   588899999999999999999 444

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=2.3e-34  Score=230.30  Aligned_cols=169  Identities=19%  Similarity=0.282  Sum_probs=151.3

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .++|++|||||++|||+++|++|+++|++  |++. +|+.+.++++.+.+.+.+.++.++++|++|+++++++++++.+.
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~--vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYN--IVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999998  6665 88877766666666666778999999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.|++++++.++|+|++++.|      +|||+||..+..
T Consensus        80 ~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~~~~  146 (258)
T 3oid_A           80 FGRLDVFVNNAASGV-------LRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGG------HIVSISSLGSIR  146 (258)
T ss_dssp             HSCCCEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE------EEEEEEEGGGTS
T ss_pred             cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECchhhCC
Confidence            999999999999764       5678889999999999999999999999999999987765      999999999888


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|++||+++++|++++ .||
T Consensus       147 ~---~~~~~~Y~asKaa~~~l~~~la~e~  172 (258)
T 3oid_A          147 Y---LENYTTVGVSKAALEALTRYLAVEL  172 (258)
T ss_dssp             B---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             C---CCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            7   688899999999999999999 444

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.1e-34  Score=232.92  Aligned_cols=168  Identities=24%  Similarity=0.351  Sum_probs=148.6

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++++|++|||||++|||+++|++|+++|++  |++++|+.+.++...+.+   +.++.++++|++|+++++++++++
T Consensus        23 ~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~   97 (277)
T 3gvc_A           23 NHPDLAGKVAIVTGAGAGIGLAVARRLADEGCH--VLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDAC   97 (277)
T ss_dssp             ----CTTCEEEETTTTSTHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999997  999999876655443333   567899999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.|      +|||+||..
T Consensus        98 ~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~Iv~isS~~  164 (277)
T 3gvc_A           98 VAAFGGVDKLVANAGVVH-------LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGG------AIVNLSSLA  164 (277)
T ss_dssp             HHHHSSCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE------EEEEECCGG
T ss_pred             HHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcchh
Confidence            999999999999999874       5677889999999999999999999999999999887665      999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   .++...|+++|+++++|+++++
T Consensus       165 ~~~~---~~~~~~Y~asKaa~~~l~~~la  190 (277)
T 3gvc_A          165 GQVA---VGGTGAYGMSKAGIIQLSRITA  190 (277)
T ss_dssp             GTSC---CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             hccC---CCCchhHHHHHHHHHHHHHHHH
Confidence            9887   6888999999999999999984

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.9e-34  Score=233.45  Aligned_cols=172  Identities=26%  Similarity=0.303  Sum_probs=154.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++++|+.+.++++.+.+...+.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAK--VVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999997  99999998877776666666677899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...      +..++.+.+.++|++.+++|+.|++.+++.++|+|++++.|      +||++||..+.
T Consensus        82 ~~g~iD~lvnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~~  149 (280)
T 3tox_A           82 RFGGLDTAFNNAGALG------AMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGG------SLTFTSSFVGH  149 (280)
T ss_dssp             HHSCCCEEEECCCCCC------SCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCSBTT
T ss_pred             HcCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEEcChhhC
Confidence            9999999999999864      34678899999999999999999999999999999987765      99999999887


Q ss_pred             -CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 -IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 -~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                       .+   .++...|++||+|+++|++++ .||
T Consensus       150 ~~~---~~~~~~Y~asKaa~~~l~~~la~e~  177 (280)
T 3tox_A          150 TAG---FAGVAPYAASKAGLIGLVQALAVEL  177 (280)
T ss_dssp             TBC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCchhHHHHHHHHHHHHHHHHHHh
Confidence             44   578899999999999999999 444

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.2e-34  Score=231.80  Aligned_cols=172  Identities=20%  Similarity=0.297  Sum_probs=151.2

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ....+++++|++|||||++|||+++|++|+++|++  |++.+|+++.++++.+.   .+.++.++++|++|+++++++++
T Consensus        19 ~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~   93 (277)
T 4dqx_A           19 YFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAY--VVVADVNEDAAVRVANE---IGSKAFGVRVDVSSAKDAESMVE   93 (277)
T ss_dssp             ---CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHH---HCTTEEEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHH---hCCceEEEEecCCCHHHHHHHHH
Confidence            34457889999999999999999999999999997  99999987665443333   35678999999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++++++|+|++++.|      +|||+||
T Consensus        94 ~~~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~iv~isS  160 (277)
T 4dqx_A           94 KTTAKWGRVDVLVNNAGFGT-------TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGG------SIINTTS  160 (277)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-------CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCE------EEEEECC
T ss_pred             HHHHHcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEECc
Confidence            99999999999999999864       5677889999999999999999999999999999887655      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+   .++...|++||+|+++|++++ .||
T Consensus       161 ~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  191 (277)
T 4dqx_A          161 YTATSA---IADRTAYVASKGAISSLTRAMAMDH  191 (277)
T ss_dssp             GGGTSC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCcC---CCCChhHHHHHHHHHHHHHHHHHHh
Confidence            999887   688899999999999999999 444

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2.8e-34  Score=231.76  Aligned_cols=173  Identities=18%  Similarity=0.236  Sum_probs=150.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-------ccchhhcCCCceeEEEecCCCHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-------LLDLKNRFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      +++++|++|||||++|||+++|++|+++|++  |++++|+.+..+.       ..+.+...+.++.+++||++|++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGAN--VAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            6789999999999999999999999999997  9999999876433       222333446789999999999999999


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      +++++.++++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|+|++++.|      +|||
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iv~  146 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAIW-------LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNP------HILT  146 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-------CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSC------EEEE
T ss_pred             HHHHHHHHcCCCCEEEECCCccc-------CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCc------eEEE
Confidence            99999999999999999999874       5677889999999999999999999999999999987765      9999


Q ss_pred             eecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          177 LSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       177 iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +||..+..+. +.++...|++||+++++|++++ .||
T Consensus       147 isS~~~~~~~-~~~~~~~Y~asKaal~~l~~~la~e~  182 (274)
T 3e03_A          147 LAPPPSLNPA-WWGAHTGYTLAKMGMSLVTLGLAAEF  182 (274)
T ss_dssp             CCCCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ECChHhcCCC-CCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            9998876651 0256788999999999999999 444

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-34  Score=232.37  Aligned_cols=174  Identities=16%  Similarity=0.218  Sum_probs=150.0

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCcccccchhhcC-CCceeEEEecCCCHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRF-PERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~-~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      ...+++++|++|||||++|||+++|++|+++|++  |++.+|+. +.++.+.+.+... +.++.++++|++|++++++++
T Consensus        18 ~~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   95 (281)
T 3v2h_A           18 LYFQSMMTKTAVITGSTSGIGLAIARTLAKAGAN--IVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMM   95 (281)
T ss_dssp             ----CCTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHH
T ss_pred             hhhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHH
Confidence            3346788999999999999999999999999997  99999843 4444444444433 568999999999999999999


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.|      +|||+|
T Consensus        96 ~~~~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~is  162 (281)
T 3v2h_A           96 AMVADRFGGADILVNNAGVQF-------VEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWG------RIINIA  162 (281)
T ss_dssp             HHHHHHTSSCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEC
T ss_pred             HHHHHHCCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEEC
Confidence            999999999999999999874       5678889999999999999999999999999999887665      999999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+..+   .++...|+++|+++++|++++ .||
T Consensus       163 S~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  194 (281)
T 3v2h_A          163 SAHGLVA---SPFKSAYVAAKHGIMGLTKTVALEV  194 (281)
T ss_dssp             CGGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccccC---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            9999887   578899999999999999999 444

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=3.4e-34  Score=231.79  Aligned_cols=171  Identities=19%  Similarity=0.273  Sum_probs=150.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ..+++|++|||||++|||+++|++|+++|++  |++++|+.+.++...+.+...+.++.+++||++|+++++++++++.+
T Consensus        20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (279)
T 3sju_A           20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIA--VYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVE   97 (279)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999997  99999998777766666666677899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhh--HHhcCCCCCCCCceEEEEeecCc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSP--LLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|  .|++++.|      +|||+||..
T Consensus        98 ~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g------~iV~isS~~  164 (279)
T 3sju_A           98 RFGPIGILVNSAGRNG-------GGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWG------RIVNIASTG  164 (279)
T ss_dssp             HHCSCCEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCE------EEEEECCGG
T ss_pred             HcCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCc------EEEEECChh
Confidence            9999999999999874       56778899999999999999999999999999  57776655      999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|+++|+|+++|++++ .||
T Consensus       165 ~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  193 (279)
T 3sju_A          165 GKQG---VMYAAPYTASKHGVVGFTKSVGFEL  193 (279)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hccC---CCCChhHHHHHHHHHHHHHHHHHHH
Confidence            9887   678899999999999999999 443

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=4.8e-34  Score=227.03  Aligned_cols=167  Identities=24%  Similarity=0.348  Sum_probs=149.7

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|+++||||++|||+++|++|+++|++  |++++|+++.++.+.+.+...+.++.++++|++|+++++++++++.+.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAA--VAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  999999887666655555555668999999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++ |      +|||+||..+..
T Consensus        82 ~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g------~iv~isS~~~~~  147 (247)
T 2jah_A           82 LGGLDILVNNAGIML-------LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-G------TVVQMSSIAGRV  147 (247)
T ss_dssp             HSCCSEEEECCCCCC-------CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCGGGTC
T ss_pred             cCCCCEEEECCCCCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-C------EEEEEccHHhcC
Confidence            999999999999864       45677889999999999999999999999999998765 5      999999999887


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|+++|+++++|+++++
T Consensus       148 ~---~~~~~~Y~asK~a~~~~~~~la  170 (247)
T 2jah_A          148 N---VRNAAVYQATKFGVNAFSETLR  170 (247)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             C---CCCCcHHHHHHHHHHHHHHHHH
Confidence            7   5788999999999999999993

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=5.9e-34  Score=230.00  Aligned_cols=173  Identities=19%  Similarity=0.189  Sum_probs=155.4

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ...+++++|++|||||++|||+++|++|+++|++  |++.+|+++.++...+.+...+.++.++++|++|++++++++++
T Consensus        26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  103 (275)
T 4imr_A           26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAH--VILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIER  103 (275)
T ss_dssp             HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            3447789999999999999999999999999997  99999999888776666666678899999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+. +++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.|      +|||+||.
T Consensus       104 ~~~~-g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~Iv~isS~  169 (275)
T 4imr_A          104 AEAI-APVDILVINASAQI-------NATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWG------RVVSIGSI  169 (275)
T ss_dssp             HHHH-SCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCG
T ss_pred             HHHh-CCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECCH
Confidence            9888 99999999999874       5678889999999999999999999999999999887655      99999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+..+   .++...|++||+|+++|++++ .||
T Consensus       170 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  199 (275)
T 4imr_A          170 NQLRP---KSVVTAYAATKAAQHNLIQSQARDF  199 (275)
T ss_dssp             GGTSC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCC---CCCchhhHHHHHHHHHHHHHHHHHh
Confidence            98876   577788999999999999999 444

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=5.8e-34  Score=234.41  Aligned_cols=172  Identities=20%  Similarity=0.285  Sum_probs=149.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC------------CcccccchhhcCCCceeEEEecCCCH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------------GATGLLDLKNRFPERLDVLQLDLTVE   91 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~------------~~~~~~~~~~~~~~~~~~~~~Dl~~~   91 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++++|+..            .+++..+.+...+.++.++++|++|+
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~--Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGAD--IVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCe--EEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            4688999999999999999999999999997  888887632            12223334445577899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCc
Q 028056           92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV  171 (214)
Q Consensus        92 ~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~  171 (214)
                      ++++++++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++++++|+|++++.+     
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~-----  187 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISN-------QGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQG-----  187 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSC-----
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-----
Confidence            9999999999999999999999999875       5677889999999999999999999999999999876533     


Q ss_pred             eEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       172 ~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ++|||+||..+..+   .++...|++||+|+++|+++| .||
T Consensus       188 g~Iv~isS~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  226 (317)
T 3oec_A          188 GSVIFVSSTVGLRG---APGQSHYAASKHGVQGLMLSLANEV  226 (317)
T ss_dssp             EEEEEECCGGGSSC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECcHHhcCC---CCCCcchHHHHHHHHHHHHHHHHHH
Confidence            49999999999887   688899999999999999999 444

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.6e-34  Score=232.75  Aligned_cols=175  Identities=19%  Similarity=0.214  Sum_probs=147.5

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCC-ceeEEEecCCCHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++||++|||||++|||+++|++|+++|++  |++++|+++.++...+.+...+. .+.+++||++|+++++++++++
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  105 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYS--VVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAV  105 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999997  99999998776665544433333 4589999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|+||||||...      +..++.+.+.++|++.+++|+.|++.+++.++|+|++++.+    .++|||+||..
T Consensus       106 ~~~~g~iD~lvnnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~----~g~IV~isS~~  175 (281)
T 4dry_A          106 RAEFARLDLLVNNAGSNV------PPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPR----GGRIINNGSIS  175 (281)
T ss_dssp             HHHHSCCSEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSC----CEEEEEECCGG
T ss_pred             HHHcCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC----CcEEEEECCHH
Confidence            999999999999999864      24678899999999999999999999999999999876510    14999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|+++|+|+++|++++ .||
T Consensus       176 ~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  204 (281)
T 4dry_A          176 AQTP---RPNSAPYTATKHAITGLTKSTALDG  204 (281)
T ss_dssp             GTCC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCC---CCCChhHHHHHHHHHHHHHHHHHHh
Confidence            9887   688899999999999999999 444

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=2.2e-34  Score=229.02  Aligned_cols=169  Identities=20%  Similarity=0.293  Sum_probs=149.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++.+|+.+.+++..+.+   +.++.+++||++|+++++++++++.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGAT--VIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQA   76 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999997  999999876655433333   56899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++++++|+|++++.+     ++||++||..+.
T Consensus        77 ~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~-----g~iv~isS~~~~  144 (247)
T 3rwb_A           77 LTGGIDILVNNASIVP-------FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKA-----GRVISIASNTFF  144 (247)
T ss_dssp             HHSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECCTHHH
T ss_pred             HCCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-----cEEEEECchhhc
Confidence            9999999999999874       5678899999999999999999999999999999876522     499999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .+++..|+++|+|+++|++++ .||
T Consensus       145 ~~---~~~~~~Y~asKaa~~~~~~~la~e~  171 (247)
T 3rwb_A          145 AG---TPNMAAYVAAKGGVIGFTRALATEL  171 (247)
T ss_dssp             HT---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCchhhHHHHHHHHHHHHHHHHHh
Confidence            87   588899999999999999999 443

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=2.1e-34  Score=232.82  Aligned_cols=174  Identities=15%  Similarity=0.211  Sum_probs=152.8

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh-hcCCCceeEEEecCCCHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      .....+++|++|||||++|||+++|++|+++|++  |++.+|+.+..++..+.+ ...+.++.++++|++|+++++++++
T Consensus        20 ~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   97 (277)
T 4fc7_A           20 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCH--TVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVD   97 (277)
T ss_dssp             BCTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            3345689999999999999999999999999997  999999987665543333 3346789999999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.++++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++++++|+|++++.|      +|||+||
T Consensus        98 ~~~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS  164 (277)
T 4fc7_A           98 QALKEFGRIDILINCAAGNF-------LCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGG------VIVNITA  164 (277)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCE------EEEEECC
T ss_pred             HHHHHcCCCCEEEECCcCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEECc
Confidence            99999999999999999764       5677889999999999999999999999999998776554      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+   .++...|+++|+|+++|++++ .||
T Consensus       165 ~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  195 (277)
T 4fc7_A          165 TLGNRG---QALQVHAGSAKAAVDAMTRHLAVEW  195 (277)
T ss_dssp             SHHHHT---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCC---CCCcHHHHHHHHHHHHHHHHHHHHh
Confidence            999887   578899999999999999999 444

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=7.2e-34  Score=228.55  Aligned_cols=174  Identities=22%  Similarity=0.328  Sum_probs=149.4

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh-hcCCCceeEEEecCCCHHHHHHH
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      |+.+..++++|++|||||++|||+++|++|+++|++  |++++|+++.++...+.+ ...+.++.+++||++|+++++++
T Consensus        12 ~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   89 (267)
T 1vl8_A           12 HMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCS--VVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKL   89 (267)
T ss_dssp             -----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            345567889999999999999999999999999997  999999876655544333 33356788999999999999999


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      ++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.+      +|||+
T Consensus        90 ~~~~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~i  156 (267)
T 1vl8_A           90 LEAVKEKFGKLDTVVNAAGINR-------RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNP------SIINI  156 (267)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSC------EEEEE
T ss_pred             HHHHHHHcCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEE
Confidence            9999999999999999999864       4567888999999999999999999999999999887655      99999


Q ss_pred             ecCc-ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          178 SARV-GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       178 ss~~-~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ||.. +..+   .++...|+++|+++++|+++++
T Consensus       157 sS~~~~~~~---~~~~~~Y~asK~a~~~~~~~la  187 (267)
T 1vl8_A          157 GSLTVEEVT---MPNISAYAASKGGVASLTKALA  187 (267)
T ss_dssp             CCGGGTCCC---SSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcchhccC---CCCChhHHHHHHHHHHHHHHHH
Confidence            9988 7666   5778899999999999999983

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=8.8e-34  Score=226.99  Aligned_cols=172  Identities=22%  Similarity=0.297  Sum_probs=152.0

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|++|||||++|||+++|++|+++|++  |++++|+++.++.+.+.+...+.++.++++|++|+++++++++++.
T Consensus         4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (260)
T 2ae2_A            4 RWNLEGCTALVTGGSRGIGYGIVEELASLGAS--VYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVA   81 (260)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  9999998876665544454456688999999999999999999999


Q ss_pred             HHc-CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          103 EKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       103 ~~~-~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      +.+ +++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.+      +||++||..
T Consensus        82 ~~~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~  148 (260)
T 2ae2_A           82 NHFHGKLNILVNNAGIVI-------YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG------NVVFISSVS  148 (260)
T ss_dssp             HHTTTCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSE------EEEEECCGG
T ss_pred             HHcCCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcchh
Confidence            999 89999999999864       4567788999999999999999999999999999877654      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|+++|+++++|++++ .||
T Consensus       149 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~  177 (260)
T 2ae2_A          149 GALA---VPYEAVYGATKGAMDQLTRCLAFEW  177 (260)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hccC---CCCcchHHHHHHHHHHHHHHHHHHH
Confidence            8776   577899999999999999999 444

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-34  Score=228.84  Aligned_cols=172  Identities=18%  Similarity=0.271  Sum_probs=149.2

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      +.+++++|++|||||++|||+++|++|+++|++  |++++|++++++.+.+.+.+.  +.++.+++||++|+++++++++
T Consensus         7 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   84 (267)
T 1iy8_A            7 PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAK--LSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVT   84 (267)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHH
Confidence            346789999999999999999999999999997  999999887665544444332  5678999999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||...      ...++.+.+.++|++.+++|+.|++.+++.++|+|++++.+      +|||+||
T Consensus        85 ~~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS  152 (267)
T 1iy8_A           85 ATTERFGRIDGFFNNAGIEG------KQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSG------MVVNTAS  152 (267)
T ss_dssp             HHHHHHSCCSEEEECCCCCC------CCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECC
T ss_pred             HHHHHcCCCCEEEECCCcCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEEcc
Confidence            99999999999999999864      12567888999999999999999999999999999876655      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+..+   .++...|+++|+++++|+++++
T Consensus       153 ~~~~~~---~~~~~~Y~asK~a~~~~~~~la  180 (267)
T 1iy8_A          153 VGGIRG---IGNQSGYAAAKHGVVGLTRNSA  180 (267)
T ss_dssp             GGGTSB---CSSBHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccC---CCCCccHHHHHHHHHHHHHHHH
Confidence            998877   5778999999999999999983

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-33  Score=225.32  Aligned_cols=178  Identities=20%  Similarity=0.244  Sum_probs=142.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|++|||||++|||+++|++|+++|++  |++++|+++..++..+.+   +.++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGAT--VLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999997  999999988766544333   56789999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||......   ......+.+.++|++.+++|+.|++.++++++|+|+++........++|||+||..+.
T Consensus        78 ~~g~id~lv~nAg~~~~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tpc_A           78 EFGHVHGLVNCAGTAPGEK---ILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAF  154 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCC---SEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             HcCCCCEEEECCCCCCCCc---cccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhc
Confidence            9999999999999874110   0112336788999999999999999999999999987532211223599999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|++||+++++|++++ .||
T Consensus       155 ~~---~~~~~~Y~asKaa~~~~~~~la~e~  181 (257)
T 3tpc_A          155 DG---QIGQAAYAASKGGVAALTLPAAREL  181 (257)
T ss_dssp             HC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCCcchHHHHHHHHHHHHHHHHHH
Confidence            87   578899999999999999999 443

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=4e-34  Score=227.15  Aligned_cols=169  Identities=22%  Similarity=0.257  Sum_probs=154.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++|+++||||++|||+++|++|+++|++  |++++|+++..+.+.+.+.+.+.++.++++|++|+++++++++++.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGAT--VVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999997  99999998877776666666677899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|.+++.+      +||++||..+.
T Consensus        79 ~~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~~~  145 (247)
T 3lyl_A           79 ENLAIDILVNNAGITR-------DNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWG------RIISIGSVVGS  145 (247)
T ss_dssp             TTCCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHH
T ss_pred             HcCCCCEEEECCCCCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCe------EEEEEcchhhc
Confidence            9999999999999874       5677888999999999999999999999999999887665      99999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++|+++++
T Consensus       146 ~~---~~~~~~Y~~sK~a~~~~~~~la  169 (247)
T 3lyl_A          146 AG---NPGQTNYCAAKAGVIGFSKSLA  169 (247)
T ss_dssp             HC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCcHHHHHHHHHHHHHHHHHH
Confidence            87   5788999999999999999994

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.1e-34  Score=228.59  Aligned_cols=170  Identities=24%  Similarity=0.363  Sum_probs=142.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--C-CceeEEEecCCCHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--P-ERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      +++++|++|||||++|||+++|++|+++|++  |++++|+++.++.+.+.+.+.  + .++.+++||++|++++++++++
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYR--VVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCE--EEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            5688999999999999999999999999997  999999987776655444332  2 5788999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|+||||||...       ..++ +.+.++|++.+++|+.|++.++++++|+|++++.|      +|||+||.
T Consensus        81 ~~~~~g~iD~lvnnAg~~~-------~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~  146 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFM-------DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNG------YIFNVASR  146 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCC-------CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC-
T ss_pred             HHHhcCCCCEEEECCCcCC-------CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCe------EEEEEccH
Confidence            9999999999999999874       3445 67889999999999999999999999999877655      99999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+..+   .++...|+++|+++++|++++ .||
T Consensus       147 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  176 (250)
T 3nyw_A          147 AAKYG---FADGGIYGSTKFALLGLAESLYREL  176 (250)
T ss_dssp             ---------CCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCC---CCCCcchHHHHHHHHHHHHHHHHHh
Confidence            99886   345789999999999999999 444

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.1e-33  Score=226.80  Aligned_cols=170  Identities=24%  Similarity=0.286  Sum_probs=154.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++++|+.+.++.+.+.+.+.+.++.++.+|++|+++++++++++.+
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGAR--VVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999997  99999998877776666666677899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...      ...++.+.+.++|++.+++|+.|++.+++.++|+|++++.|      +||++||..+.
T Consensus       103 ~~g~id~lv~~Ag~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~~  170 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGW------FGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRG------HIINISSLAGK  170 (262)
T ss_dssp             HHSCCSEEEECCCCCC------CSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC------EEEEECSSCSS
T ss_pred             hcCCCCEEEECCCccC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc------eEEEEechhhc
Confidence            9999999999999843      25678889999999999999999999999999999887765      99999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++|+++++
T Consensus       171 ~~---~~~~~~Y~asKaa~~~l~~~la  194 (262)
T 3rkr_A          171 NP---VADGAAYTASKWGLNGLMTSAA  194 (262)
T ss_dssp             CC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCCchHHHHHHHHHHHHHHHH
Confidence            87   6788999999999999999994

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-34  Score=235.65  Aligned_cols=174  Identities=20%  Similarity=0.278  Sum_probs=152.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCC-cEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDK-GCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~-~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .++++|++|||||++|||+++|++|+++|+. ..|++.+|+.+.++++.+.+...  +.++.+++||++|++++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            5689999999999999999999999999981 13999999988777655554432  45789999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|+||||||...      +..++.+.+.++|++.+++|+.|++.++++++|+|++++.|      +|||+||.
T Consensus       109 ~~~~~g~iD~lVnnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~IV~isS~  176 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKAL------GSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSG------DIVNLGSI  176 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCC------CCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCG
T ss_pred             HHHhcCCCCEEEECCCcCC------CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEEECCh
Confidence            9999999999999999764      24567888999999999999999999999999999887665      99999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+..+   .++...|+++|+|+++|+++| .||
T Consensus       177 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  206 (287)
T 3rku_A          177 AGRDA---YPTGSIYCASKFAVGAFTDSLRKEL  206 (287)
T ss_dssp             GGTSC---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhcCC---CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            99887   688899999999999999999 454

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.2e-33  Score=226.20  Aligned_cols=169  Identities=21%  Similarity=0.347  Sum_probs=149.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++.+|+.+.+++..+.+   +.++.+++||++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGAT--VAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999997  999999876655443333   56789999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +++++|+||||||...       ..++.+.+.++|++.+++|+.|++++++.++|+|++++.+     ++|||+||..+.
T Consensus        79 ~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~-----g~iv~isS~~~~  146 (259)
T 4e6p_A           79 HAGGLDILVNNAALFD-------LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRG-----GKIINMASQAGR  146 (259)
T ss_dssp             HSSSCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCGGGT
T ss_pred             HcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----eEEEEECChhhc
Confidence            9999999999999874       5678889999999999999999999999999999876522     499999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+++++|++++ .||
T Consensus       147 ~~---~~~~~~Y~asK~a~~~~~~~la~e~  173 (259)
T 4e6p_A          147 RG---EALVAIYCATKAAVISLTQSAGLDL  173 (259)
T ss_dssp             SC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCChHHHHHHHHHHHHHHHHHHHh
Confidence            87   578899999999999999999 444

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.6e-33  Score=225.82  Aligned_cols=170  Identities=23%  Similarity=0.286  Sum_probs=141.5

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      +....|++++|++|||||++|||+++|++|+++|++  |++++|++++..+   .+.+.  ++.++.+|++|++++++++
T Consensus        18 ~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~---~~~~~--~~~~~~~Dv~~~~~v~~~~   90 (260)
T 3gem_A           18 YFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHR--VIISYRTEHASVT---ELRQA--GAVALYGDFSCETGIMAFI   90 (260)
T ss_dssp             ---------CCCEEESSTTSHHHHHHHHHHHHTTCC--EEEEESSCCHHHH---HHHHH--TCEEEECCTTSHHHHHHHH
T ss_pred             ccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCChHHHHH---HHHhc--CCeEEECCCCCHHHHHHHH
Confidence            344558899999999999999999999999999998  9999998865322   22221  3788999999999999999


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +++.+.++++|+||||||...       ... .+.+.++|++.+++|+.|+++++++++|+|++++.|      +|||+|
T Consensus        91 ~~~~~~~g~iD~lv~nAg~~~-------~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g------~iv~is  156 (260)
T 3gem_A           91 DLLKTQTSSLRAVVHNASEWL-------AET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVA------DIVHIS  156 (260)
T ss_dssp             HHHHHHCSCCSEEEECCCCCC-------CCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEEC
T ss_pred             HHHHHhcCCCCEEEECCCccC-------CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------EEEEEC
Confidence            999999999999999999864       222 466789999999999999999999999999987765      999999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+..+   .++...|+++|+++++|++++ .||
T Consensus       157 S~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  188 (260)
T 3gem_A          157 DDVTRKG---SSKHIAYCATKAGLESLTLSFAARF  188 (260)
T ss_dssp             CGGGGTC---CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhhcCC---CCCcHhHHHHHHHHHHHHHHHHHHH
Confidence            9999887   678899999999999999999 454

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=4.8e-34  Score=229.50  Aligned_cols=168  Identities=19%  Similarity=0.258  Sum_probs=141.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|++|||||++|||+++|++|+++|++  |++.+|+.++++++.   .+.+.++.++++|++|+++++++++++.+
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~--V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAI--VGLHGTREDKLKEIA---ADLGKDVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH---HHHCSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH---HHhCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999997  999999876654433   33366899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|+|++++.|      +|||+||..+.
T Consensus        98 ~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~Iv~isS~~~~  164 (266)
T 3grp_A           98 EMEGIDILVNNAGITR-------DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYG------RIINITSIVGV  164 (266)
T ss_dssp             HHTSCCEEEECCCCC------------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCC---
T ss_pred             HcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc------EEEEECCHHHc
Confidence            9999999999999874       4667788999999999999999999999999999887655      99999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+|+++|++++ .||
T Consensus       165 ~~---~~~~~~Y~asKaa~~~~~~~la~e~  191 (266)
T 3grp_A          165 VG---NPGQTNYCAAKAGLIGFSKALAQEI  191 (266)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCchhHHHHHHHHHHHHHHHHHHh
Confidence            87   578899999999999999999 444

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=5.1e-34  Score=226.70  Aligned_cols=167  Identities=26%  Similarity=0.325  Sum_probs=148.3

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-CCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +.+|++|||||++|||+++|++|+++|++  |++.+++ .+..+.+.+.+...+.++.++++|++|+++++++++++.+.
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYN--VAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999997  7777664 44555555566666778999999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.|++++++.++|+|++++.|      +|||+||..+..
T Consensus        80 ~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~  146 (246)
T 3osu_A           80 FGSLDVLVNNAGITR-------DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSG------AIINLSSVVGAV  146 (246)
T ss_dssp             HSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHHH
T ss_pred             cCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEEcchhhcC
Confidence            999999999999874       4667889999999999999999999999999999887665      999999999888


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|++||+++++|+++++
T Consensus       147 ~---~~~~~~Y~~sK~a~~~~~~~la  169 (246)
T 3osu_A          147 G---NPGQANYVATKAGVIGLTKSAA  169 (246)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             C---CCCChHHHHHHHHHHHHHHHHH
Confidence            7   5788999999999999999994

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1.3e-33  Score=227.34  Aligned_cols=173  Identities=20%  Similarity=0.279  Sum_probs=149.2

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCcccccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      .....++++|++|||||++|||+++|++|+++|++  |++.+++. +..+.+.+.+...+.++.+++||++|++++++++
T Consensus        10 ~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   87 (270)
T 3is3_A           10 TYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAK--VVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLF   87 (270)
T ss_dssp             -CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             ccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            34456789999999999999999999999999997  77766544 4445555666666788999999999999999999


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +++.++++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++++++|+|++.        ++||++|
T Consensus        88 ~~~~~~~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--------g~iv~is  152 (270)
T 3is3_A           88 DQAVAHFGHLDIAVSNSGVVS-------FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG--------GRIVLTS  152 (270)
T ss_dssp             HHHHHHHSCCCEEECCCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT--------CEEEEEC
T ss_pred             HHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--------CeEEEEe
Confidence            999999999999999999874       5678899999999999999999999999999999763        3999999


Q ss_pred             cCcc-cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          179 ARVG-SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       179 s~~~-~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+ ..+   .++...|++||+++++|++++ .||
T Consensus       153 S~~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~  185 (270)
T 3is3_A          153 SNTSKDFS---VPKHSLYSGSKGAVDSFVRIFSKDC  185 (270)
T ss_dssp             CTTTTTCC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchhccCC---CCCCchhHHHHHHHHHHHHHHHHHh
Confidence            9874 444   578899999999999999999 444

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=9e-34  Score=223.97  Aligned_cols=164  Identities=20%  Similarity=0.194  Sum_probs=142.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+|++|||||++|||+++|++|+++|++  |++++|+.+.+++..+.+   +.++.++++|++|+++++++++++.+.++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQ--VSMMGRRYQRLQQQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---GGGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHh---cCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999997  999999987666544444   23689999999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|+|++++       ++|||+||..+..+ 
T Consensus        77 ~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~~iv~isS~~~~~~-  141 (235)
T 3l6e_A           77 LPELVLHCAGTGE-------FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-------GVLANVLSSAAQVG-  141 (235)
T ss_dssp             SCSEEEEECCCC-------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-------EEEEEECCEECCSS-
T ss_pred             CCcEEEECCCCCC-------CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CEEEEEeCHHhcCC-
Confidence            9999999999864       56778889999999999999999999999999998764       39999999999888 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          187 NRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                        .++...|++||+|+++|+++| .||
T Consensus       142 --~~~~~~Y~asKaa~~~~~~~la~e~  166 (235)
T 3l6e_A          142 --KANESLYCASKWGMRGFLESLRAEL  166 (235)
T ss_dssp             --CSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHHHHh
Confidence              688899999999999999999 454

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.4e-33  Score=230.48  Aligned_cols=171  Identities=15%  Similarity=0.219  Sum_probs=154.5

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|++|||||++|||+++|++|+++|++  |++++|+.+.++.+.+.+...+.++.+++||++|.++++++++++.+.
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGAR--LVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            378999999999999999999999999997  999999988777766666666778999999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.+     ++||++||..+..
T Consensus       106 ~g~id~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-----g~iv~isS~~~~~  173 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVV-------AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTG-----GHIAFTASFAGLV  173 (301)
T ss_dssp             HSSCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC-----EEEEEECCGGGTS
T ss_pred             CCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC-----cEEEEeCchhhcC
Confidence            999999999999875       5678889999999999999999999999999999876622     4999999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|++||+++++|+++| .|+
T Consensus       174 ~---~~~~~~Y~asKaa~~~~~~~la~e~  199 (301)
T 3tjr_A          174 P---NAGLGTYGVAKYGVVGLAETLAREV  199 (301)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            8   688899999999999999999 444

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.3e-33  Score=231.67  Aligned_cols=175  Identities=19%  Similarity=0.253  Sum_probs=153.2

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-------ccchhhcCCCceeEEEecCCCHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-------LLDLKNRFPERLDVLQLDLTVESTI   94 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~~~~~v   94 (214)
                      ...+++||++|||||++|||+++|++|+++|++  |++++|+.+..++       ..+.+...+.++.+++||++|++++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~--Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v  116 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGAN--IVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQI  116 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCE--EEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHH
Confidence            346789999999999999999999999999997  9999999876433       3344455577899999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEE
Q 028056           95 EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVV  174 (214)
Q Consensus        95 ~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~i  174 (214)
                      +++++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++++++|+|++++.+      +|
T Consensus       117 ~~~~~~~~~~~g~iDilVnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g------~I  183 (346)
T 3kvo_A          117 SAAVEKAIKKFGGIDILVNNASAIS-------LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVA------HI  183 (346)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSC------EE
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCC------EE
Confidence            9999999999999999999999875       4677889999999999999999999999999999987765      99


Q ss_pred             EEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          175 ANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       175 v~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ||+||..+..+. +.+++..|+++|+++++|+++| .||
T Consensus       184 V~iSS~~~~~~~-~~~~~~~Y~aSKaal~~l~~~la~e~  221 (346)
T 3kvo_A          184 LNISPPLNLNPV-WFKQHCAYTIAKYGMSMYVLGMAEEF  221 (346)
T ss_dssp             EEECCCCCCCGG-GTSSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEECCHHHcCCC-CCCCchHHHHHHHHHHHHHHHHHHHh
Confidence            999999887652 2467889999999999999999 444

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.5e-33  Score=227.27  Aligned_cols=171  Identities=18%  Similarity=0.189  Sum_probs=147.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++.+|+.+.+++..+.+   +.++.+++||++|+++++++++++.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   98 (272)
T 4dyv_A           24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYG--VALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVE   98 (272)
T ss_dssp             ----CCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  999999876655443333   46789999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...      +..++.+.+.++|++.+++|+.|++.++++++|+|++++.+    .++|||+||..+.
T Consensus        99 ~~g~iD~lVnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~----~g~IV~isS~~~~  168 (272)
T 4dyv_A           99 KFGRVDVLFNNAGTGA------PAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPR----GGRIINNGSISAT  168 (272)
T ss_dssp             HHSCCCEEEECCCCCC------CSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSC----CEEEEEECCSSTT
T ss_pred             HcCCCCEEEECCCCCC------CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCC----CcEEEEECchhhc
Confidence            9999999999999864      34678899999999999999999999999999999876520    1499999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+|+++|++++ .||
T Consensus       169 ~~---~~~~~~Y~asKaa~~~l~~~la~e~  195 (272)
T 4dyv_A          169 SP---RPYSAPYTATKHAITGLTKSTSLDG  195 (272)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            87   678899999999999999999 444

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-33  Score=226.79  Aligned_cols=172  Identities=23%  Similarity=0.305  Sum_probs=152.3

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|++|||||++|||+++|++|+++|++  |++++|+++.++++.+.+...+.++.++++|++|+++++++++++.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   93 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGAR--VYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVA   93 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  9999999876665555555556689999999999999999999999


Q ss_pred             HHc-CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          103 EKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       103 ~~~-~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      +.+ +++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|      +|||+||..
T Consensus        94 ~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~  160 (273)
T 1ae1_A           94 HVFDGKLNILVNNAGVVI-------HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG------NVIFLSSIA  160 (273)
T ss_dssp             HHTTSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSE------EEEEECCGG
T ss_pred             HHcCCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcCHh
Confidence            999 89999999999864       4567788999999999999999999999999999876654      999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|+++|+++++|++++ .||
T Consensus       161 ~~~~---~~~~~~Y~asK~a~~~~~~~la~e~  189 (273)
T 1ae1_A          161 GFSA---LPSVSLYSASKGAINQMTKSLACEW  189 (273)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCC---CCCcchhHHHHHHHHHHHHHHHHHH
Confidence            8877   577899999999999999998 444

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-33  Score=224.28  Aligned_cols=173  Identities=18%  Similarity=0.260  Sum_probs=148.0

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      ..+...+++|++|||||++|||+++|++|+++|++  |++.+ ++.+..+...+.+...+.++.++++|++|++++++++
T Consensus         5 ~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   82 (256)
T 3ezl_A            5 HHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFR--VVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAF   82 (256)
T ss_dssp             --------CEEEEETTTTSHHHHHHHHHHHHTTEE--EEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHH
Confidence            34456688999999999999999999999999997  77766 6666655555555566778999999999999999999


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|+|++++.+      +||++|
T Consensus        83 ~~~~~~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~is  149 (256)
T 3ezl_A           83 DKVKAEVGEIDVLVNNAGITR-------DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWG------RIINIS  149 (256)
T ss_dssp             HHHHHHTCCEEEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEC
T ss_pred             HHHHHhcCCCCEEEECCCCCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEc
Confidence            999999999999999999875       4567888999999999999999999999999999887655      999999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      |..+..+   .++...|+++|+++++|+++++
T Consensus       150 S~~~~~~---~~~~~~Y~asK~a~~~~~~~la  178 (256)
T 3ezl_A          150 SVNGQKG---QFGQTNYSTAKAGIHGFTMSLA  178 (256)
T ss_dssp             CCCGGGS---CSCCHHHHHHHHHHHHHHHHHH
T ss_pred             chhhccC---CCCCcccHHHHHHHHHHHHHHH
Confidence            9999888   6888999999999999999994

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=1.9e-33  Score=225.95  Aligned_cols=166  Identities=18%  Similarity=0.269  Sum_probs=145.3

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ..++.+|++|||||++|||+++|++|+++|++  |++++|+.+.++...      ..++.++++|++|+++++++++++.
T Consensus        11 ~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (266)
T 3p19_A           11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHP--LLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAE   82 (266)
T ss_dssp             ----CCCEEEEESTTSHHHHHHHHHHHHTTCC--EEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999998  999999876543321      2368899999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|+|++++.|      +|||+||..+
T Consensus        83 ~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~IV~isS~~~  149 (266)
T 3p19_A           83 KIYGPADAIVNNAGMML-------LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCG------TIINISSIAG  149 (266)
T ss_dssp             HHHCSEEEEEECCCCCC-------CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCGGG
T ss_pred             HHCCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcChhh
Confidence            99999999999999874       5677888999999999999999999999999999887765      9999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+++++|++++ .||
T Consensus       150 ~~~---~~~~~~Y~asK~a~~~~~~~la~e~  177 (266)
T 3p19_A          150 KKT---FPDHAAYCGTKFAVHAISENVREEV  177 (266)
T ss_dssp             TSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC---CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            887   678899999999999999999 443

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-33  Score=225.59  Aligned_cols=173  Identities=18%  Similarity=0.218  Sum_probs=147.8

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      +...+++++|++|||||++|||+++|++|+++|++  |++++|++ ..++..+.+...+.++.++++|++|+++++++.+
T Consensus        23 m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   99 (273)
T 3uf0_A           23 MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAH--VLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAE   99 (273)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            33457899999999999999999999999999997  88888653 3444444455556789999999999999999955


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      . .+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.|      +|||+||
T Consensus       100 ~-~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~IV~isS  165 (273)
T 3uf0_A          100 E-LAATRRVDVLVNNAGIIA-------RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSG------RIVTIAS  165 (273)
T ss_dssp             H-HHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC
T ss_pred             H-HHhcCCCcEEEECCCCCC-------CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEcc
Confidence            4 455689999999999875       5678899999999999999999999999999999887665      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+   .++...|+++|+|+++|++++ .||
T Consensus       166 ~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  196 (273)
T 3uf0_A          166 MLSFQG---GRNVAAYAASKHAVVGLTRALASEW  196 (273)
T ss_dssp             GGGTSC---CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHhcCC---CCCChhHHHHHHHHHHHHHHHHHHH
Confidence            999887   578899999999999999999 443

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-33  Score=229.02  Aligned_cols=176  Identities=19%  Similarity=0.265  Sum_probs=143.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++++|++|||||++|||+++|++|+++|++  |+++++ +.+.++.+.+.+...+.++.+++||++|+++++++++++.
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  102 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFD--IAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVV  102 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCe--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  888885 5555555555555667789999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||....     ...++.+.+.++|++.+++|+.|+++++++++|+|++++..   ..++|||+||..+
T Consensus       103 ~~~g~iD~lvnnAg~~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~---~~g~Iv~isS~~~  174 (280)
T 4da9_A          103 AEFGRIDCLVNNAGIASI-----VRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDAR---ASRSIINITSVSA  174 (280)
T ss_dssp             HHHSCCCEEEEECC-----------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCC---CCEEEEEECCC--
T ss_pred             HHcCCCCEEEECCCcccc-----CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCC---CCCEEEEEcchhh
Confidence            999999999999998421     24678899999999999999999999999999999875410   1149999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+|+++|++++ .||
T Consensus       175 ~~~---~~~~~~Y~asKaa~~~l~~~la~e~  202 (280)
T 4da9_A          175 VMT---SPERLDYCMSKAGLAAFSQGLALRL  202 (280)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCccHHHHHHHHHHHHHHHHHHHH
Confidence            887   578899999999999999999 444

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1e-33  Score=226.69  Aligned_cols=170  Identities=21%  Similarity=0.303  Sum_probs=148.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +++++|++|||||++|||+++|++|+++|++  |++. .++.+..+...+.+.+.+.++.+++||++|+++++++++++.
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGAN--VVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAA   81 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999997  7776 555555555555556667789999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|+||||||...      +..++.+.+.++|++.+++|+.|+++++++++|+|++.        ++||++||..+
T Consensus        82 ~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--------g~iv~isS~~~  147 (259)
T 3edm_A           82 DKFGEIHGLVHVAGGLI------ARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG--------GAIVTFSSQAG  147 (259)
T ss_dssp             HHHCSEEEEEECCCCCC------CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEECCHHH
T ss_pred             HHhCCCCEEEECCCccC------CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CEEEEEcCHHh
Confidence            99999999999999763      25677889999999999999999999999999999762        39999999988


Q ss_pred             c-CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 S-IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~-~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      . .+   .++...|++||+|+++|++++ .||
T Consensus       148 ~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  176 (259)
T 3edm_A          148 RDGG---GPGALAYATSKGAVMTFTRGLAKEV  176 (259)
T ss_dssp             HHCC---STTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCC---CCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            7 45   577889999999999999999 444

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.2e-33  Score=224.47  Aligned_cols=168  Identities=24%  Similarity=0.358  Sum_probs=148.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++++|+++||||++|||+++|++|+++|++  |++.+| ++++++.+.+.+...+.++.++++|++|+++++++++++.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGAN--VVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVD   78 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999997  888888 66555555555555566889999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +|||+||..+.
T Consensus        79 ~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  145 (246)
T 2uvd_A           79 VFGQVDILVNNAGVTK-------DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHG------RIVNIASVVGV  145 (246)
T ss_dssp             HHSCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHH
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECCHHhc
Confidence            9999999999999864       4667889999999999999999999999999999876654      99999999887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++|+++++
T Consensus       146 ~~---~~~~~~Y~asK~a~~~~~~~la  169 (246)
T 2uvd_A          146 TG---NPGQANYVAAKAGVIGLTKTSA  169 (246)
T ss_dssp             HC---CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCCchHHHHHHHHHHHHHHHH
Confidence            77   5778999999999999999984

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.3e-33  Score=228.06  Aligned_cols=176  Identities=22%  Similarity=0.255  Sum_probs=143.6

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC------------CcccccchhhcCCCceeEEEe
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------------GATGLLDLKNRFPERLDVLQL   86 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~------------~~~~~~~~~~~~~~~~~~~~~   86 (214)
                      |..+..++++|++|||||++|||+++|++|+++|++  |++++|+.+            .++...+.+...+.++.+++|
T Consensus         4 ~~~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (278)
T 3sx2_A            4 PRSSEGPLTGKVAFITGAARGQGRAHAVRLAADGAD--IIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQA   81 (278)
T ss_dssp             -----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CCCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeC
Confidence            344457799999999999999999999999999997  999998732            222233334445678999999


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCC
Q 028056           87 DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTG  166 (214)
Q Consensus        87 Dl~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  166 (214)
                      |++|+++++++++++.+.++++|+||||||...       ...    +.++|++.+++|+.|+++++++++|+|++++.+
T Consensus        82 D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-------~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  150 (278)
T 3sx2_A           82 DVRDRESLSAALQAGLDELGRLDIVVANAGIAP-------MSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTG  150 (278)
T ss_dssp             CTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCC-------CSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-------CCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999999999864       111    478999999999999999999999999876532


Q ss_pred             CCCCceEEEEeecCcccCCC-CCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          167 IERDVAVVANLSARVGSIGD-NRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       167 ~~~~~~~iv~iss~~~~~~~-~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                           ++|||+||..+..+. .+.++...|++||+++++|++++ .||
T Consensus       151 -----g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~  193 (278)
T 3sx2_A          151 -----GSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLL  193 (278)
T ss_dssp             -----EEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cEEEEEccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence                 499999999988763 12267789999999999999999 444

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=2e-33  Score=225.25  Aligned_cols=169  Identities=18%  Similarity=0.280  Sum_probs=149.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC-CCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +++++|++|||||++|||+++|++|+++|++  |++++|++++++.+.+.+... +.++.++++|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAH--IVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVR   80 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            5688999999999999999999999999997  999999876655544444332 5678999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||..+
T Consensus        81 ~~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~  147 (263)
T 3ai3_A           81 SSFGGADILVNNAGTGS-------NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGG------AIIHNASICA  147 (263)
T ss_dssp             HHHSSCSEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGG
T ss_pred             HHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECchhh
Confidence            99999999999999864       4567788999999999999999999999999999876654      9999999998


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|+++++++++++
T Consensus       148 ~~~---~~~~~~Y~~sK~a~~~~~~~la  172 (263)
T 3ai3_A          148 VQP---LWYEPIYNVTKAALMMFSKTLA  172 (263)
T ss_dssp             TSC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCcchHHHHHHHHHHHHHHHH
Confidence            877   5778899999999999999984

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=4.1e-33  Score=221.84  Aligned_cols=168  Identities=20%  Similarity=0.313  Sum_probs=147.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++.+|++ +.+++   .+.+.+.++.++++|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGAD--IAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVI   77 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  99999987 44332   333446678999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|+|++++.+      +|||+||..+
T Consensus        78 ~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~  144 (249)
T 2ew8_A           78 STFGRCDILVNNAGIYP-------LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWG------RIINLTSTTY  144 (249)
T ss_dssp             HHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGG
T ss_pred             HHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCe------EEEEEcchhh
Confidence            99999999999999864       4567888999999999999999999999999999876654      9999999998


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+++++|++++ .||
T Consensus       145 ~~~---~~~~~~Y~asK~a~~~~~~~la~e~  172 (249)
T 2ew8_A          145 WLK---IEAYTHYISTKAANIGFTRALASDL  172 (249)
T ss_dssp             GSC---CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCchhHHHHHHHHHHHHHHHHHHH
Confidence            877   577899999999999999999 443

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1.3e-33  Score=225.70  Aligned_cols=166  Identities=23%  Similarity=0.378  Sum_probs=148.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++.+|+++.++++.+.+   +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAE--VLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999997  999999876655443333   56789999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++++++|+|++.        ++|||+||..+.
T Consensus        79 ~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--------g~iv~isS~~~~  143 (255)
T 4eso_A           79 TLGAIDLLHINAGVSE-------LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG--------GSIVFTSSVADE  143 (255)
T ss_dssp             HHSSEEEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEECCGGGS
T ss_pred             HhCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC--------CEEEEECChhhc
Confidence            9999999999999874       5678899999999999999999999999999998763        399999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+++++|++++ .||
T Consensus       144 ~~---~~~~~~Y~asKaa~~~~~~~la~e~  170 (255)
T 4eso_A          144 GG---HPGMSVYSASKAALVSFASVLAAEL  170 (255)
T ss_dssp             SB---CTTBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CC---CCCchHHHHHHHHHHHHHHHHHHHH
Confidence            87   688899999999999999999 444

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2.4e-33  Score=228.13  Aligned_cols=170  Identities=21%  Similarity=0.252  Sum_probs=149.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc-ccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++.+|+.+.. +...+.+.+.+.++.++++|++|+++++++++++.
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  120 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGAN--IAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETV  120 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999997  99999987643 33555556667789999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|+||||||...      +..++.+.+.++|++.+++|+.|+++++++++|+|++.        ++|||+||..+
T Consensus       121 ~~~g~iD~lvnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--------g~iv~isS~~~  186 (291)
T 3ijr_A          121 RQLGSLNILVNNVAQQY------PQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG--------DVIINTASIVA  186 (291)
T ss_dssp             HHHSSCCEEEECCCCCC------CCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT--------CEEEEECCTHH
T ss_pred             HHcCCCCEEEECCCCcC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--------CEEEEEechHh
Confidence            99999999999999864      34567888999999999999999999999999998653        29999999998


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+++++|++++ .||
T Consensus       187 ~~~---~~~~~~Y~asKaa~~~l~~~la~e~  214 (291)
T 3ijr_A          187 YEG---NETLIDYSATKGAIVAFTRSLSQSL  214 (291)
T ss_dssp             HHC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCChhHHHHHHHHHHHHHHHHHHH
Confidence            887   578899999999999999999 444

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=4.3e-33  Score=221.09  Aligned_cols=173  Identities=24%  Similarity=0.360  Sum_probs=152.8

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC-CceeEEEecC--CCHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDL--TVESTIEASAK   99 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl--~~~~~v~~~~~   99 (214)
                      ..++++|+++||||++|||.++|++|+++|++  |++++|+++.++++.+.+...+ .+..++.+|+  ++.++++++++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~   86 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGAS--VVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAA   86 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHH
Confidence            35689999999999999999999999999997  9999999887776655555444 4677787777  99999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||...      +..++.+.+.++|++.+++|+.|++.+++.++|+|++++.+      +||++||
T Consensus        87 ~~~~~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------~iv~isS  154 (247)
T 3i1j_A           87 RVEHEFGRLDGLLHNASIIG------PRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDA------SIAFTSS  154 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCC------CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSE------EEEEECC
T ss_pred             HHHHhCCCCCEEEECCccCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------eEEEEcc
Confidence            99999999999999999864      35678889999999999999999999999999999887655      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+   .++...|+++|+++++|++++ .||
T Consensus       155 ~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~  185 (247)
T 3i1j_A          155 SVGRKG---RANWGAYGVSKFATEGLMQTLADEL  185 (247)
T ss_dssp             GGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcCC---CCCcchhHHHHHHHHHHHHHHHHHh
Confidence            999887   678899999999999999999 454

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-33  Score=227.19  Aligned_cols=170  Identities=21%  Similarity=0.294  Sum_probs=146.1

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .|.+++|++|||||++|||+++|++|+++|++  |++. .++.+..+.+.+.+...+.++.+++||++|+++++++++++
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~--Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   99 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFT--VVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATA   99 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCE--EEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            35678999999999999999999999999997  7666 45555555566666666778999999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|+|++.        ++|||+||..
T Consensus       100 ~~~~g~iD~lvnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--------g~iv~isS~~  164 (267)
T 3u5t_A          100 EEAFGGVDVLVNNAGIMP-------LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG--------GRIINMSTSQ  164 (267)
T ss_dssp             HHHHSCEEEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCTH
T ss_pred             HHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--------CeEEEEeChh
Confidence            999999999999999874       5678889999999999999999999999999999653        3999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|++||+|+++|+++| .||
T Consensus       165 ~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  193 (267)
T 3u5t_A          165 VGLL---HPSYGIYAAAKAGVEAMTHVLSKEL  193 (267)
T ss_dssp             HHHC---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hccC---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            8777   578899999999999999999 454

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=6.4e-33  Score=223.27  Aligned_cols=165  Identities=23%  Similarity=0.353  Sum_probs=144.5

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ..+..++++|++|||||++|||+++|++|+++|++  |++++|+.+...          ..+..+++|++|+++++++++
T Consensus         6 ~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~   73 (269)
T 3vtz_A            6 HHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAK--VVSVSLDEKSDV----------NVSDHFKIDVTNEEEVKEAVE   73 (269)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCC--CT----------TSSEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCchhcc----------CceeEEEecCCCHHHHHHHHH
Confidence            34457889999999999999999999999999997  999999876531          246678999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.|      +|||+||
T Consensus        74 ~~~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g------~iv~isS  140 (269)
T 3vtz_A           74 KTTKKYGRIDILVNNAGIEQ-------YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHG------SIINIAS  140 (269)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-------CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC
T ss_pred             HHHHHcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEECc
Confidence            99999999999999999864       5677889999999999999999999999999999887665      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+   .++...|++||+++++|++++ .||
T Consensus       141 ~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  171 (269)
T 3vtz_A          141 VQSYAA---TKNAAAYVTSKHALLGLTRSVAIDY  171 (269)
T ss_dssp             GGGTSB---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccC---CCCChhHHHHHHHHHHHHHHHHHHh
Confidence            999887   678899999999999999999 454

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-33  Score=225.11  Aligned_cols=173  Identities=25%  Similarity=0.325  Sum_probs=149.7

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCcccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      +..+++++|++|||||++|||+++|++|+++|++  |++.+++. +..+.+.+.+...+.++.++++|++|+++++++++
T Consensus        24 m~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~  101 (271)
T 3v2g_A           24 MTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAA--VALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIR  101 (271)
T ss_dssp             HTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            4456789999999999999999999999999997  77776654 44455555666667789999999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|+|++.        ++||++||
T Consensus       102 ~~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~--------g~iv~isS  166 (271)
T 3v2g_A          102 ETVEALGGLDILVNSAGIWH-------SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG--------GRIITIGS  166 (271)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT--------CEEEEECC
T ss_pred             HHHHHcCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--------CEEEEEeC
Confidence            99999999999999999874       5678899999999999999999999999999998653        39999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+.  .++...|+++|+++++|++++ .||
T Consensus       167 ~~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~  198 (271)
T 3v2g_A          167 NLAELVP--WPGISLYSASKAALAGLTKGLARDL  198 (271)
T ss_dssp             GGGTCCC--STTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccCC--CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            8776552  577899999999999999999 444

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=4.2e-33  Score=223.00  Aligned_cols=172  Identities=16%  Similarity=0.169  Sum_probs=151.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++++|+++++++..+.+...+.++.++.||++|+++++++++++.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAH--VVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999997  99999988766555444545566789999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||..+.
T Consensus        88 ~~g~iD~lv~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  155 (260)
T 2zat_A           88 LHGGVDILVSNAAVNP------FFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGG------SVLIVSSVGAY  155 (260)
T ss_dssp             HHSCCCEEEECCCCCC------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEEechhhc
Confidence            9999999999999753      23567788999999999999999999999999999877654      99999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+++++|++++ .||
T Consensus       156 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~  182 (260)
T 2zat_A          156 HP---FPNLGPYNVSKTALLGLTKNLAVEL  182 (260)
T ss_dssp             SC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCchhHHHHHHHHHHHHHHHHHHh
Confidence            77   577899999999999999998 444

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-33  Score=224.84  Aligned_cols=170  Identities=21%  Similarity=0.260  Sum_probs=150.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|++|||||++|||++++++|+++|++  |++++|+++.++.+.+.+...+.++.+++||++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTA--IALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR   80 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999988766655555555566899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...      ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +|||+||..+.
T Consensus        81 ~~g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  148 (262)
T 1zem_A           81 DFGKIDFLFNNAGYQG------AFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYG------RIVNTASMAGV  148 (262)
T ss_dssp             HHSCCCEEEECCCCCC------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHH
T ss_pred             HhCCCCEEEECCCCCC------CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcchhhc
Confidence            9999999999999762      14567888999999999999999999999999999876654      99999999888


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++|+++++
T Consensus       149 ~~---~~~~~~Y~asK~a~~~~~~~la  172 (262)
T 1zem_A          149 KG---PPNMAAYGTSKGAIIALTETAA  172 (262)
T ss_dssp             SC---CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCCchHHHHHHHHHHHHHHHH
Confidence            77   5778899999999999999984

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=2.5e-33  Score=228.38  Aligned_cols=171  Identities=20%  Similarity=0.208  Sum_probs=149.6

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC--CcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .+++++|++|||||++|||+++|++|+++|++  |++.+|+.+  ..+.+.+.+.+.+.++.+++||++|++++++++++
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  121 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGAD--VAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHK  121 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH
Confidence            35678999999999999999999999999997  888888633  33445555566677899999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|+||||||...      ...++.+.+.++|++.+++|+.|+++++++++|+|++.  |      +|||+||.
T Consensus       122 ~~~~~g~iD~lv~nAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--g------~Iv~isS~  187 (294)
T 3r3s_A          122 AREALGGLDILALVAGKQT------AIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG--A------SIITTSSI  187 (294)
T ss_dssp             HHHHHTCCCEEEECCCCCC------CCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT--C------EEEEECCG
T ss_pred             HHHHcCCCCEEEECCCCcC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--C------EEEEECCh
Confidence            9999999999999999864      24567889999999999999999999999999998653  3      99999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+..+   .++...|+++|+++++|++++ .||
T Consensus       188 ~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  217 (294)
T 3r3s_A          188 QAYQP---SPHLLDYAATKAAILNYSRGLAKQV  217 (294)
T ss_dssp             GGTSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccC---CCCchHHHHHHHHHHHHHHHHHHHH
Confidence            99887   688899999999999999999 444

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.6e-33  Score=226.34  Aligned_cols=177  Identities=24%  Similarity=0.353  Sum_probs=150.3

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .+.+++++|++|||||++|||+++|++|+++|++  |++++|+++.+++..+.+...+ ++.++.+|++|++++++++++
T Consensus        22 ~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~   98 (276)
T 2b4q_A           22 HPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGAR--VFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQA   98 (276)
T ss_dssp             CTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHH
Confidence            3446789999999999999999999999999997  9999998876655444444333 788899999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++..  ...++|||+||.
T Consensus        99 ~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~--~~~g~iV~isS~  169 (276)
T 2b4q_A           99 LGELSARLDILVNNAGTSW-------GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASA--ENPARVINIGSV  169 (276)
T ss_dssp             HHHHCSCCSEEEECCCCCC-------CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCS--SSCEEEEEECCG
T ss_pred             HHHhcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC--CCCCEEEEECCH
Confidence            9999999999999999864       4567788899999999999999999999999999875530  112499999999


Q ss_pred             cccCCCCCCCCcc-hhhhhHHHHHHHHHHhc-cc
Q 028056          181 VGSIGDNRLGGWH-SYRASKAALNQCKILAM-DF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~-~Y~asKaa~~~~~~~la-~~  212 (214)
                      .+..+   .++.. .|+++|+++++|+++++ ||
T Consensus       170 ~~~~~---~~~~~~~Y~asK~a~~~~~~~la~e~  200 (276)
T 2b4q_A          170 AGISA---MGEQAYAYGPSKAALHQLSRMLAKEL  200 (276)
T ss_dssp             GGTCC---CCCSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHcCC---CCCCccccHHHHHHHHHHHHHHHHHh
Confidence            88876   46667 99999999999999994 44

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=3.2e-33  Score=223.73  Aligned_cols=169  Identities=17%  Similarity=0.226  Sum_probs=148.3

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcC-CCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++|++|||||++|||++++++|+++|++  |++++|+++. ++.+.+.+... +.++.++.+|++|+++++++++++.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   79 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGAD--IVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCE--EEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            67899999999999999999999999997  9999998766 55544444332 56788999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +|||+||..+.
T Consensus        80 ~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  146 (260)
T 1x1t_A           80 QMGRIDILVNNAGIQH-------TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG------RIINIASAHGL  146 (260)
T ss_dssp             HHSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             hcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------EEEEECcHHhC
Confidence            9999999999999764       4567888999999999999999999999999999876654      99999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+++++|++++ .||
T Consensus       147 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~  173 (260)
T 1x1t_A          147 VA---SANKSAYVAAKHGVVGFTKVTALET  173 (260)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            77   577899999999999999998 444

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1.8e-33  Score=231.91  Aligned_cols=177  Identities=18%  Similarity=0.226  Sum_probs=151.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC----------CCCcccccchhhcCCCceeEEEecCCCHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN----------PNGATGLLDLKNRFPERLDVLQLDLTVEST   93 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~   93 (214)
                      ..+++|++|||||++|||+++|++|+++|++  |++++|+          .+..+.+.+.+...+.++.+++||++|+++
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  100 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGAR--VVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQ  100 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence            4589999999999999999999999999997  9999887          444444555555567789999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceE
Q 028056           94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV  173 (214)
Q Consensus        94 v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~  173 (214)
                      ++++++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.+.++|++.+.......++
T Consensus       101 v~~~~~~~~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~  173 (322)
T 3qlj_A          101 AAGLIQTAVETFGGLDVLVNNAGIVR-------DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGR  173 (322)
T ss_dssp             HHHHHHHHHHHHSCCCEEECCCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcE
Confidence            99999999999999999999999875       46788999999999999999999999999999987543211112259


Q ss_pred             EEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          174 VANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       174 iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |||+||..+..+   .++...|++||+|+++|++++ .||
T Consensus       174 IV~isS~~~~~~---~~~~~~Y~asKaal~~l~~~la~e~  210 (322)
T 3qlj_A          174 IINTSSGAGLQG---SVGQGNYSAAKAGIATLTLVGAAEM  210 (322)
T ss_dssp             EEEECCHHHHHC---BTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCHHHccC---CCCCccHHHHHHHHHHHHHHHHHHh
Confidence            999999998887   578899999999999999999 444

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1e-32  Score=221.31  Aligned_cols=171  Identities=20%  Similarity=0.218  Sum_probs=151.3

Q ss_pred             cccccCcEEEEecCC-CchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC-CCceeEEEecCCCHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGAS-RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        23 ~~~l~~k~vlItG~s-~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .+++++|++|||||+ +|||+++|++|+++|++  |++++|+.+.+++..+.+.+. +.++.+++||++|++++++++++
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   94 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGAD--VVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ   94 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCE--EEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH
Confidence            356899999999998 59999999999999997  999999987766655555433 35899999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+     ++||++||.
T Consensus        95 ~~~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-----~~iv~~sS~  162 (266)
T 3o38_A           95 TVEKAGRLDVLVNNAGLGG-------QTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHG-----GVIVNNASV  162 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCC-----EEEEEECCG
T ss_pred             HHHHhCCCcEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----eEEEEeCCH
Confidence            9999999999999999864       5677889999999999999999999999999999876333     499999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+..+   .++...|+++|+++++|+++++
T Consensus       163 ~~~~~---~~~~~~Y~~sKaa~~~~~~~la  189 (266)
T 3o38_A          163 LGWRA---QHSQSHYAAAKAGVMALTRCSA  189 (266)
T ss_dssp             GGTCC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHcCC---CCCCchHHHHHHHHHHHHHHHH
Confidence            99887   5788999999999999999994

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=4.4e-33  Score=222.81  Aligned_cols=174  Identities=22%  Similarity=0.321  Sum_probs=150.0

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .|++++|++|||||++|||+++|++|+++|++  |++++|+++.++++.+.   .+.++.++++|++|+++++++++++.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAK--VVIVDRDKAGAERVAGE---IGDAALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH---HCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999997  99999988765554333   35679999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...      +..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+  ...++||++||..+
T Consensus        79 ~~~g~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~--~~~~~iv~isS~~~  150 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGH------KPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAK--GQECVILNVASTGA  150 (261)
T ss_dssp             HHHSCCCEEEECCCCCC------CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT--TCCEEEEEECCTTT
T ss_pred             HhcCCCCEEEECCccCC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC--CCCeEEEEeCchhh
Confidence            99999999999999864      24567788999999999999999999999999999875311  11248999999998


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+++++|+++| .||
T Consensus       151 ~~~---~~~~~~Y~asKaa~~~~~~~la~e~  178 (261)
T 3n74_A          151 GRP---RPNLAWYNATKGWVVSVTKALAIEL  178 (261)
T ss_dssp             TSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCccHHHHHHHHHHHHHHHHHHHh
Confidence            877   678889999999999999999 444

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=6.6e-33  Score=221.66  Aligned_cols=167  Identities=21%  Similarity=0.296  Sum_probs=147.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC--cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +|++|||||++|||+++|++|+++|++  |++.+|+.+.  ++...+.+...+.++.++++|++|+++++++++++.+.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFD--IAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCE--EEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            689999999999999999999999997  9999998766  555444454456689999999999999999999999999


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCC-CCCCCceEEEEeecCcccC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGT-GIERDVAVVANLSARVGSI  184 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~~~~~~iv~iss~~~~~  184 (214)
                      +++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++. +      +|||+||..+..
T Consensus        80 g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~  146 (258)
T 3a28_C           80 GGFDVLVNNAGIAQ-------IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKG------KIINAASIAAIQ  146 (258)
T ss_dssp             TCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCC------EEEEECCGGGTS
T ss_pred             CCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCc------EEEEECcchhcc
Confidence            99999999999864       456788899999999999999999999999999987654 5      999999999887


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|+++|+++++|++++ .||
T Consensus       147 ~---~~~~~~Y~~sK~a~~~~~~~la~e~  172 (258)
T 3a28_C          147 G---FPILSAYSTTKFAVRGLTQAAAQEL  172 (258)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C---CCCchhHHHHHHHHHHHHHHHHHHH
Confidence            7   577899999999999999998 444

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.2e-32  Score=219.72  Aligned_cols=168  Identities=20%  Similarity=0.256  Sum_probs=147.4

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|++|||||++|||++++++|+++|++  |++++|+++  +...+.+...+.++.++.+|++|+++++++++++.+.
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGAN--IVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAERE   76 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999997  999999876  3333344444567889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||..+..
T Consensus        77 ~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~  143 (255)
T 2q2v_A           77 FGGVDILVNNAGIQH-------VAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWG------RIINIASVHGLV  143 (255)
T ss_dssp             HSSCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCGGGTS
T ss_pred             cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEcCchhcc
Confidence            999999999999864       4567788999999999999999999999999999887654      999999999887


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|+++|+++++|++++ .||
T Consensus       144 ~---~~~~~~Y~~sK~a~~~~~~~la~e~  169 (255)
T 2q2v_A          144 G---STGKAAYVAAKHGVVGLTKVVGLET  169 (255)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             C---CCCchhHHHHHHHHHHHHHHHHHHh
Confidence            7   577899999999999999999 444

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.3e-33  Score=222.61  Aligned_cols=172  Identities=17%  Similarity=0.230  Sum_probs=142.9

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|++|||||++|||.++|++|+++|++  |++++|+.+.++.+.+.+...+.++.+++||++|+++++++++++.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAA--VVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            57889999999999999999999999999997  9999999887777666666667789999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||.....    +..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||..+
T Consensus        82 ~~~g~id~li~~Ag~~~~~----~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~  151 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIFGGM----KLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGG------AIVNQSSTAA  151 (253)
T ss_dssp             HHHSCCCEEEECCCCCCGG----GGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE------EEEEECC---
T ss_pred             HHcCCCCEEEECCCcCCCC----CCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC------EEEEECCccc
Confidence            9999999999999984210    24556788999999999999999999999999999887655      9999999887


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..      +...|+++|+++++|++++ .||
T Consensus       152 ~~------~~~~Y~asK~a~~~~~~~la~e~  176 (253)
T 3qiv_A          152 WL------YSNYYGLAKVGINGLTQQLSREL  176 (253)
T ss_dssp             --------------CCHHHHHHHHHHHHHHT
T ss_pred             cC------CCchhHHHHHHHHHHHHHHHHHH
Confidence            53      3467999999999999999 554

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=7.4e-33  Score=223.71  Aligned_cols=170  Identities=25%  Similarity=0.321  Sum_probs=150.7

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|++|||||++|||+++|++|+++|++  |++++|+++.++.+.+.+.+.+.++.++.||++|+++++++++++.+.
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            688999999999999999999999999997  999999887666555555555668899999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhH--HhcCCCCCCCCceEEEEeecCcc
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL--LKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|.  |++++.+      +||++||..+
T Consensus        97 ~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g------~iv~isS~~~  163 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPG-------GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTG------RIVNIASTGG  163 (277)
T ss_dssp             TCSCSEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEE------EEEEECCGGG
T ss_pred             hCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCe------EEEEECcccc
Confidence            999999999999864       456788899999999999999999999999999  8776544      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+++++|++++ .||
T Consensus       164 ~~~---~~~~~~Y~asK~a~~~~~~~la~e~  191 (277)
T 2rhc_B          164 KQG---VVHAAPYSASKHGVVGFTKALGLEL  191 (277)
T ss_dssp             TSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCCccHHHHHHHHHHHHHHHHHHH
Confidence            877   577889999999999999998 444

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=3.4e-33  Score=224.96  Aligned_cols=172  Identities=23%  Similarity=0.309  Sum_probs=152.1

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ...+++++|++|||||++|||+++|++|+++|++  |++.+|+.+. .+.+.+.+.+.+.++.++++|++|+++++++++
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   99 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLK--VWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQ   99 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence            3457889999999999999999999999999997  9899985543 344555666667789999999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||
T Consensus       100 ~~~~~~g~id~li~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS  166 (271)
T 4iin_A          100 TIVQSDGGLSYLVNNAGVVR-------DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFG------SVVNVAS  166 (271)
T ss_dssp             HHHHHHSSCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC
T ss_pred             HHHHhcCCCCEEEECCCcCC-------CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCC------EEEEEec
Confidence            99999999999999999875       4667788999999999999999999999999999887655      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+..+   .++...|+++|+++++|+++++
T Consensus       167 ~~~~~~---~~~~~~Y~asK~a~~~~~~~la  194 (271)
T 4iin_A          167 IIGERG---NMGQTNYSASKGGMIAMSKSFA  194 (271)
T ss_dssp             HHHHHC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcCC---CCCchHhHHHHHHHHHHHHHHH
Confidence            998887   5788999999999999999994

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=6.9e-33  Score=228.18  Aligned_cols=171  Identities=17%  Similarity=0.235  Sum_probs=151.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCC--ceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE--RLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +++++|++|||||++|||.++|++|+++|++  |++++|+.++++.+.+.+...+.  ++.++.+|++|+++++++++++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~--Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCK--VAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV   81 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            4688999999999999999999999999997  99999998877765555544343  7899999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcC------CCCCCCCceEEE
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG------GTGIERDVAVVA  175 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~~~~~~~iv  175 (214)
                      .+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|.|.++      +.      ++||
T Consensus        82 ~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~------g~iV  148 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNL-------FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKG------GHVV  148 (319)
T ss_dssp             HHHTCCEEEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCC------CEEE
T ss_pred             HHhCCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCC------cEEE
Confidence            999999999999999864       5678889999999999999999999999999999764      23      4999


Q ss_pred             EeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          176 NLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       176 ~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ++||..+..+   .++...|++||+|+++|+++| .||
T Consensus       149 ~isS~a~~~~---~~~~~~Y~aSKaal~~~~~~la~e~  183 (319)
T 3ioy_A          149 NTASMAAFLA---AGSPGIYNTTKFAVRGLSESLHYSL  183 (319)
T ss_dssp             EECCGGGTCC---CSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecccccccC---CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999888   678899999999999999998 444

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.8e-33  Score=229.60  Aligned_cols=170  Identities=19%  Similarity=0.270  Sum_probs=145.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-----cccccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-----ATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      |++++|++|||||++|||+++|++|+++|++  |++.+|+...     ++.+.+.+...+.++.++++|++|++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~--V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~   78 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHR--VYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAI   78 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHH
Confidence            4577899999999999999999999999997  8888876422     22333444445678999999999999999999


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +++.++++++|+||||||+..       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.|      +||++|
T Consensus        79 ~~~~~~~g~iD~lVnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g------~iV~is  145 (324)
T 3u9l_A           79 DQIIGEDGRIDVLIHNAGHMV-------FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHG------LLIWIS  145 (324)
T ss_dssp             HHHHHHHSCCSEEEECCCCCB-------CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEC
T ss_pred             HHHHHHcCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEEe
Confidence            999999999999999999874       5678899999999999999999999999999999887765      999999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      |..+..+.  .++...|++||+++++|+++++
T Consensus       146 S~~~~~~~--~~~~~~Y~asKaa~~~~~~~la  175 (324)
T 3u9l_A          146 SSSSAGGT--PPYLAPYFAAKAAMDAIAVQYA  175 (324)
T ss_dssp             CGGGTSCC--CSSCHHHHHHHHHHHHHHHHHH
T ss_pred             cchhccCC--CCcchhHHHHHHHHHHHHHHHH
Confidence            99887552  4667899999999999999993

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.6e-33  Score=225.23  Aligned_cols=170  Identities=19%  Similarity=0.244  Sum_probs=147.9

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCC---ceeEEEecCCCHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      .+++++|++|||||++|||+++|++|+++|++  |++++|++++++.+.+.+...+.   ++.++.+|++|+++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   98 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQ--VTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIIN   98 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHH
Confidence            35689999999999999999999999999997  99999988766655444444444   78999999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcc--hhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETT--LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      ++.+.++++|+||||||...       ..+  +.+.+.++|++.+++|+.|++.+++.++|.|++++ |      +|||+
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~-------~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g------~IV~i  164 (297)
T 1xhl_A           99 TTLAKFGKIDILVNNAGANL-------ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-G------EIVNV  164 (297)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-------CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C------EEEEE
T ss_pred             HHHHhcCCCCEEEECCCcCc-------CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-C------EEEEE
Confidence            99999999999999999864       334  77889999999999999999999999999998765 5      99999


Q ss_pred             ecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          178 SARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       178 ss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ||..+..+.  .++...|+++|+++++|+++++
T Consensus       165 sS~~~~~~~--~~~~~~Y~asKaa~~~l~~~la  195 (297)
T 1xhl_A          165 SSIVAGPQA--HSGYPYYACAKAALDQYTRCTA  195 (297)
T ss_dssp             CCGGGSSSC--CTTSHHHHHHHHHHHHHHHHHH
T ss_pred             cCchhccCC--CCCcchHHHHHHHHHHHHHHHH
Confidence            999887762  1678899999999999999984

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=7.4e-33  Score=221.04  Aligned_cols=167  Identities=25%  Similarity=0.359  Sum_probs=146.6

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|++|||||++|||+++|++|+++|++  |++++|++++++.+.+.+   +.++.++++|++|+++++++++++.+.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGAR--VVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999997  999999876544433322   456889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +|||+||..+..
T Consensus        77 ~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~  143 (254)
T 1hdc_A           77 FGSVDGLVNNAGIST-------GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGG------SIVNISSAAGLM  143 (254)
T ss_dssp             HSCCCEEEECCCCCC-------CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTS
T ss_pred             cCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC------EEEEECchhhcc
Confidence            999999999999764       4567788999999999999999999999999999876654      999999999887


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|+++|+++++|++++ .||
T Consensus       144 ~---~~~~~~Y~asK~a~~~~~~~la~e~  169 (254)
T 1hdc_A          144 G---LALTSSYGASKWGVRGLSKLAAVEL  169 (254)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C---CCCchhHHHHHHHHHHHHHHHHHHh
Confidence            7   577899999999999999998 443

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=8.8e-34  Score=227.44  Aligned_cols=171  Identities=15%  Similarity=0.212  Sum_probs=143.7

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC---cccccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      ..+++++|++|||||++|||+++|++|+++|++  |++.+|+...   ++++.+.+...+.++.+++||++|++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   82 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVN--LVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLF   82 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCE--EEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            346789999999999999999999999999997  8888775433   33444455555778999999999999999999


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++++++.++|+|++.        ++||++|
T Consensus        83 ~~~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--------g~iv~is  147 (262)
T 3ksu_A           83 DFAEKEFGKVDIAINTVGKVL-------KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN--------GHIITIA  147 (262)
T ss_dssp             HHHHHHHCSEEEEEECCCCCC-------SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEE--------EEEEEEC
T ss_pred             HHHHHHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC--------CEEEEEe
Confidence            999999999999999999875       5678889999999999999999999999999999432        4999999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+..+   .++...|++||+|+++|+++| .||
T Consensus       148 S~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  179 (262)
T 3ksu_A          148 TSLLAAY---TGFYSTYAGNKAPVEHYTRAASKEL  179 (262)
T ss_dssp             CCHHHHH---HCCCCC-----CHHHHHHHHHHHHT
T ss_pred             chhhccC---CCCCchhHHHHHHHHHHHHHHHHHH
Confidence            9988777   577889999999999999999 454

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.2e-33  Score=220.76  Aligned_cols=164  Identities=24%  Similarity=0.370  Sum_probs=144.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|++|||||++|||+++|++|+++|+...|++.+|+++.++++.+..   +.++.++++|++|+++++++++++.+.+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGK   78 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999975435888999876655443333   567999999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|+||||||...      +..++.+.+.++|++.+++|+.|++.+++.++|+|++++ |      +|||+||..+..+  
T Consensus        79 id~lvnnAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g------~iv~isS~~~~~~--  143 (254)
T 3kzv_A           79 IDSLVANAGVLE------PVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-G------NVVFVSSDACNMY--  143 (254)
T ss_dssp             CCEEEEECCCCC------CCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCSCCCCS--
T ss_pred             ccEEEECCcccC------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-C------eEEEEcCchhccC--
Confidence            999999999864      346778899999999999999999999999999998765 4      9999999998887  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .++...|++||+++++|+++++
T Consensus       144 -~~~~~~Y~asK~a~~~~~~~la  165 (254)
T 3kzv_A          144 -FSSWGAYGSSKAALNHFAMTLA  165 (254)
T ss_dssp             -SCCSHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCcchHHHHHHHHHHHHHHHH
Confidence             6888999999999999999994

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-32  Score=219.80  Aligned_cols=165  Identities=22%  Similarity=0.312  Sum_probs=147.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|++|||||++|||++++++|+++|++  |++.+|+++.++.+.+.+...+.++.++++|++|+++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFA--VAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999997  999999887666555555545667899999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeecCcccCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      +|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++ .+      +|||+||..+..+ 
T Consensus        80 id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~~-  145 (256)
T 1geg_A           80 FDVIVNNAGVAP-------STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGG------KIINACSQAGHVG-  145 (256)
T ss_dssp             CCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE------EEEEECCGGGTSC-
T ss_pred             CCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC------EEEEECchhhcCC-
Confidence            999999999764       46678889999999999999999999999999998765 34      9999999998887 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .++...|+++|+++++|+++++
T Consensus       146 --~~~~~~Y~asK~a~~~~~~~la  167 (256)
T 1geg_A          146 --NPELAVYSSSKFAVRGLTQTAA  167 (256)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             --CCCchhHHHHHHHHHHHHHHHH
Confidence              5778899999999999999984

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=9.5e-33  Score=221.00  Aligned_cols=170  Identities=12%  Similarity=0.140  Sum_probs=148.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +++++|++|||||++|||++++++|+++|++  |++++|+++.++.+.+.+...  +.++.++++|++|+++++++++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGAR--LLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKA   80 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHH
Confidence            5688999999999999999999999999997  999999876655544433321  237889999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++ +|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||..
T Consensus        81 ~~~~g-id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~  146 (260)
T 2z1n_A           81 RDLGG-ADILVYSTGGPR-------PGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWG------RMVYIGSVT  146 (260)
T ss_dssp             HHTTC-CSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCE------EEEEECCGG
T ss_pred             HHhcC-CCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECchh
Confidence            99998 999999999764       4567888999999999999999999999999999876654      999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|+++|++++++++++ .||
T Consensus       147 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~  175 (260)
T 2z1n_A          147 LLRP---WQDLALSNIMRLPVIGVVRTLALEL  175 (260)
T ss_dssp             GTSC---CTTBHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hcCC---CCCCchhHHHHHHHHHHHHHHHHHH
Confidence            8877   577899999999999999998 444

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.4e-32  Score=224.17  Aligned_cols=175  Identities=13%  Similarity=0.174  Sum_probs=148.5

Q ss_pred             cccccccCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~--giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      .+.+++++|++|||||+|  |||+++|++|+++|++  |++++|+++..+.+.+..... +.+.+++||++|++++++++
T Consensus        23 ~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~   99 (296)
T 3k31_A           23 RTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAE--VALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMF   99 (296)
T ss_dssp             CCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHH
T ss_pred             cchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHH
Confidence            345678999999999997  9999999999999997  999999875544444444433 34789999999999999999


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +++.++++++|+||||||.....   ....++.+.+.++|++.+++|+.+++.+++.++|+|++  .      ++|||+|
T Consensus       100 ~~~~~~~g~iD~lVnnAG~~~~~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~------g~IV~is  168 (296)
T 3k31_A          100 KVLAEEWGSLDFVVHAVAFSDKN---ELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--G------GSILTLS  168 (296)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCHH---HHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--C------EEEEEEE
T ss_pred             HHHHHHcCCCCEEEECCCcCCcc---cccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--C------CEEEEEE
Confidence            99999999999999999986400   00156788999999999999999999999999999876  2      4999999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+..+   .+++..|++||+|+++|+++| .||
T Consensus       169 S~~~~~~---~~~~~~Y~asKaal~~l~~~la~e~  200 (296)
T 3k31_A          169 YYGAEKV---VPHYNVMGVCKAALEASVKYLAVDL  200 (296)
T ss_dssp             CGGGTSC---CTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ehhhccC---CCCchhhHHHHHHHHHHHHHHHHHH
Confidence            9998887   678899999999999999999 444

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=5.3e-33  Score=223.56  Aligned_cols=171  Identities=18%  Similarity=0.240  Sum_probs=147.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ..+++|++|||||++|||+++|++|+++|++  |++.++ +.+..+...+.....+.++.++.||++|+++++++++++.
T Consensus        21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   98 (269)
T 3gk3_A           21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMA--VAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVL   98 (269)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHTTTCE--EEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            4478999999999999999999999999997  888774 4333333444444556789999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +||++||..+
T Consensus        99 ~~~g~id~li~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g------~iv~isS~~~  165 (269)
T 3gk3_A           99 ADFGKVDVLINNAGITR-------DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFG------RIVNIGSVNG  165 (269)
T ss_dssp             HHHSCCSEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHH
T ss_pred             HHcCCCCEEEECCCcCC-------CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEeCChhh
Confidence            99999999999999875       4667888999999999999999999999999999887655      9999999998


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+|+++|++++ .+|
T Consensus       166 ~~~---~~~~~~Y~asKaa~~~~~~~la~e~  193 (269)
T 3gk3_A          166 SRG---AFGQANYASAKAGIHGFTKTLALET  193 (269)
T ss_dssp             HHC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCcchHHHHHHHHHHHHHHHHHHh
Confidence            887   578899999999999999999 444

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=7.9e-33  Score=222.37  Aligned_cols=169  Identities=18%  Similarity=0.228  Sum_probs=146.2

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      +.+++++|++|||||++|||+++|++|+++|++  |++.+|+.+.+++..+.+...  +..+.++.+|++++++++++++
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGAN--VLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH
Confidence            346789999999999999999999999999997  999999987766654444332  3467889999999999877654


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                          +++++|+||||||...       ..++.+.+.++|++.+++|+.|++++++.++|+|++++.|      +|||+||
T Consensus        82 ----~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g------~iv~isS  144 (267)
T 3t4x_A           82 ----KYPKVDILINNLGIFE-------PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEG------RVIFIAS  144 (267)
T ss_dssp             ----HCCCCSEEEECCCCCC-------CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEE------EEEEECC
T ss_pred             ----hcCCCCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC------EEEEEcc
Confidence                5689999999999875       4667889999999999999999999999999999887655      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHhc-cc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILAM-DF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la-~~  212 (214)
                      ..+..+   .++...|+++|+|+++|+++++ ||
T Consensus       145 ~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  175 (267)
T 3t4x_A          145 EAAIMP---SQEMAHYSATKTMQLSLSRSLAELT  175 (267)
T ss_dssp             GGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhhccC---CCcchHHHHHHHHHHHHHHHHHHHh
Confidence            999887   6888999999999999999994 44

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-32  Score=217.25  Aligned_cols=163  Identities=21%  Similarity=0.244  Sum_probs=144.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|++|||||++|||++++++|+++|++  |++++|+++. ++..+.+.    + .++++|++|+++++++++++.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~   73 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGAL--VALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAY   73 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  9999998866 44333332    3 7889999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|+|++++.+      +|||+||..+.
T Consensus        74 ~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~~~  140 (256)
T 2d1y_A           74 ALGRVDVLVNNAAIAA-------PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGG------AIVNVASVQGL  140 (256)
T ss_dssp             HHSCCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEcccccc
Confidence            9999999999999864       4567788999999999999999999999999999887654      99999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++|+++++
T Consensus       141 ~~---~~~~~~Y~~sK~a~~~~~~~la  164 (256)
T 2d1y_A          141 FA---EQENAAYNASKGGLVNLTRSLA  164 (256)
T ss_dssp             SB---CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCChhHHHHHHHHHHHHHHHH
Confidence            77   5778999999999999999994

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-32  Score=219.43  Aligned_cols=164  Identities=24%  Similarity=0.338  Sum_probs=146.0

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|++|||||++|||++++++|+++|++  |++.+|+++.++++.+.+   +.++.++++|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAK--VAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  999999876554433333   567889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ +      +||++||..+..
T Consensus        78 ~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g------~iv~isS~~~~~  143 (253)
T 1hxh_A           78 LGTLNVLVNNAGILL-------PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-G------SIINMASVSSWL  143 (253)
T ss_dssp             HCSCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-E------EEEEECCGGGTS
T ss_pred             cCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-C------EEEEEcchhhcC
Confidence            999999999999864       45677889999999999999999999999999998765 5      999999999887


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|+++|+++++|+++++
T Consensus       144 ~---~~~~~~Y~~sK~a~~~~~~~la  166 (253)
T 1hxh_A          144 P---IEQYAGYSASKAAVSALTRAAA  166 (253)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             C---CCCCccHHHHHHHHHHHHHHHH
Confidence            7   5788899999999999999984

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2e-32  Score=217.41  Aligned_cols=163  Identities=20%  Similarity=0.240  Sum_probs=142.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++|+++||||++|||++++++|+++|++  |++++|++++++...+.   .+  +.++.+|++|+++++++++++.+
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~--~~~~~~D~~~~~~~~~~~~~~~~   73 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGAR--LVACDIEEGPLREAAEA---VG--AHPVVMDVADPASVERGFAEALA   73 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHT---TT--CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHH---cC--CEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999987654433222   22  78899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +|||+||.. .
T Consensus        74 ~~g~id~lvn~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~-~  139 (245)
T 1uls_A           74 HLGRLDGVVHYAGITR-------DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG------SIVLTASRV-Y  139 (245)
T ss_dssp             HHSSCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE------EEEEECCGG-G
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEEccch-h
Confidence            9999999999999864       4567888999999999999999999999999999877654      999999988 6


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++|+++++
T Consensus       140 ~~---~~~~~~Y~asK~a~~~~~~~la  163 (245)
T 1uls_A          140 LG---NLGQANYAASMAGVVGLTRTLA  163 (245)
T ss_dssp             GC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCchhHHHHHHHHHHHHHHHH
Confidence            66   5778899999999999999984

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.1e-32  Score=224.28  Aligned_cols=177  Identities=20%  Similarity=0.234  Sum_probs=146.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCcccccchhh-cCCCceeEEEecCCCHH---------
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKN-RFPERLDVLQLDLTVES---------   92 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~---------   92 (214)
                      +++++|++|||||++|||+++|++|+++|++  |++.+ |+.+.++.+.+.+. ..+.++.++++|++|++         
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~--V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYA--VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccc
Confidence            4578999999999999999999999999997  88888 88776665544443 44678999999999999         


Q ss_pred             --------HHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhcc--------------HhhhhhheeeechhHH
Q 028056           93 --------TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE--------------KSSLMLAYEVNAVGPI  150 (214)
Q Consensus        93 --------~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~  150 (214)
                              +++++++++.+.++++|+||||||...       ..++.+.+              .++|++.+++|+.+++
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~  155 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-------PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPY  155 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------CCCCCC-------------HHHHHHHHHHHHHHTHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCC-------CCChhhcCccccccccccccccHHHHHHHHHHHhHHHH
Confidence                    999999999999999999999999864       34455666              8999999999999999


Q ss_pred             HHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          151 LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       151 ~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+++.++|+|++++.......++|||+||..+..+   .++...|+++|+++++|+++| .||
T Consensus       156 ~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  215 (291)
T 1e7w_A          156 FLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP---LLGYTIYTMAKGALEGLTRSAALEL  215 (291)
T ss_dssp             HHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCC---CCCCchhHHHHHHHHHHHHHHHHHH
Confidence            99999999998765210011249999999998877   578899999999999999999 444

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=1.7e-32  Score=220.15  Aligned_cols=176  Identities=19%  Similarity=0.252  Sum_probs=152.0

Q ss_pred             cccccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCc-cc-ccchhhcCCCceeEEEecCCCHHHHHH
Q 028056           21 SASVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TG-LLDLKNRFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~-~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      ...+++++|++|||||+  +|||.++|++|+++|++  |++++|+.... ++ +.++....+.++.+++||++|++++++
T Consensus        13 ~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~   90 (267)
T 3gdg_A           13 LDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAA--VAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEK   90 (267)
T ss_dssp             HHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCE--EEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHH
T ss_pred             ccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCe--EEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHH
Confidence            34578999999999999  99999999999999997  88888887664 33 333333446789999999999999999


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      +++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||+
T Consensus        91 ~~~~~~~~~g~id~li~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~  157 (267)
T 3gdg_A           91 LVKDVVADFGQIDAFIANAGATA-------DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTG------SLVI  157 (267)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCC-------CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEE
T ss_pred             HHHHHHHHcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCc------eEEE
Confidence            99999999999999999999875       4567788999999999999999999999999999887665      9999


Q ss_pred             eecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          177 LSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       177 iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +||..+..+.. .++...|+++|+++++|++++ .||
T Consensus       158 isS~~~~~~~~-~~~~~~Y~~sK~a~~~~~~~la~e~  193 (267)
T 3gdg_A          158 TASMSGHIANF-PQEQTSYNVAKAGCIHMARSLANEW  193 (267)
T ss_dssp             ECCGGGTSCCS-SSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EccccccccCC-CCCCCcchHHHHHHHHHHHHHHHHh
Confidence            99998877631 246789999999999999999 454

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2e-32  Score=221.64  Aligned_cols=172  Identities=19%  Similarity=0.220  Sum_probs=144.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++|++|||||++|||+++|++|+++|++  |++++|+.+.++++.   ...+.++.++++|++|+++++++++++.+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGAR--VAVLDKSAERLRELE---VAHGGNAVGVVGDVRSLQDQKRAAERCLA   75 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH---HHTBTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCE--EEEEeCCHHHHHHHH---HHcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999997  999999876654433   33456899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||.......  ......+.+.++|++.+++|+.++++++++++|+|++++ |      +||++||..+.
T Consensus        76 ~~g~iD~lvnnAg~~~~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g------~iv~isS~~~~  146 (281)
T 3zv4_A           76 AFGKIDTLIPNAGIWDYSTA--LADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-G------SVVFTISNAGF  146 (281)
T ss_dssp             HHSCCCEEECCCCCCCTTCC--GGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCGGGT
T ss_pred             hcCCCCEEEECCCcCccccc--cccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-C------eEEEEecchhc
Confidence            99999999999998641100  011223455678999999999999999999999998754 3      99999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|++||+++++|+++| .||
T Consensus       147 ~~---~~~~~~Y~asKaa~~~l~~~la~e~  173 (281)
T 3zv4_A          147 YP---NGGGPLYTATKHAVVGLVRQMAFEL  173 (281)
T ss_dssp             SS---SSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCCchhHHHHHHHHHHHHHHHHHh
Confidence            87   578899999999999999999 444

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=3.1e-32  Score=216.54  Aligned_cols=166  Identities=22%  Similarity=0.365  Sum_probs=136.9

Q ss_pred             ccccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHH
Q 028056           18 SSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        18 ~~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      .+.+..+++++|++|||||++|||++++++|+++|++  |++.+|++++.+.+.           .+++|++|+++++++
T Consensus         5 ~~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~-----------~~~~D~~~~~~~~~~   71 (247)
T 1uzm_A            5 ATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHK--VAVTHRGSGAPKGLF-----------GVEVDVTDSDAVDRA   71 (247)
T ss_dssp             ----CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSSCCCTTSE-----------EEECCTTCHHHHHHH
T ss_pred             ccCcccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChHHHHHhc-----------CeeccCCCHHHHHHH
Confidence            3444556789999999999999999999999999997  999999876544321           388999999999999


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      ++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++
T Consensus        72 ~~~~~~~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~i  138 (247)
T 1uzm_A           72 FTAVEEHQGPVEVLVSNAGLSA-------DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFG------RMIFI  138 (247)
T ss_dssp             HHHHHHHHSSCSEEEEECSCCC------------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEE
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC------EEEEE
Confidence            9999999999999999999864       4567788999999999999999999999999999877654      99999


Q ss_pred             ecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          178 SARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       178 ss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ||..+..+   .++...|+++|+++++|++++ .||
T Consensus       139 sS~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~  171 (247)
T 1uzm_A          139 GSVSGLWG---IGNQANYAASKAGVIGMARSIAREL  171 (247)
T ss_dssp             CCCCC--------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHhhccC---CCCChhHHHHHHHHHHHHHHHHHHh
Confidence            99988877   577889999999999999998 443

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-32  Score=221.48  Aligned_cols=168  Identities=19%  Similarity=0.242  Sum_probs=146.7

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCC---ceeEEEecCCCHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE---RLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ++++|++|||||++|||+++|++|+++|++  |++++|+++.++++.+.+...+.   ++.+++||++|+++++++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGAN--VTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   80 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999997  99999988766655444444344   7899999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcc----hhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETT----LNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      .+.++++|+||||||...       ..+    +.+.+.++|++.+++|+.+++.+++.++|+|++++ +      +|||+
T Consensus        81 ~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g------~iv~i  146 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGAAI-------PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-G------EIVNV  146 (280)
T ss_dssp             HHHHSCCCEEEECCCCCC-------CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEE
T ss_pred             HHhcCCCCEEEECCCCCC-------CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-C------cEEEe
Confidence            999999999999999864       233    67888999999999999999999999999998655 4      99999


Q ss_pred             ecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          178 SARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       178 ss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ||..+..+.  .++...|+++|+++++|+++++
T Consensus       147 sS~~~~~~~--~~~~~~Y~asK~a~~~~~~~la  177 (280)
T 1xkq_A          147 SSIVAGPQA--QPDFLYYAIAKAALDQYTRSTA  177 (280)
T ss_dssp             CCGGGSSSC--CCSSHHHHHHHHHHHHHHHHHH
T ss_pred             cCccccCCC--CCcccHHHHHHHHHHHHHHHHH
Confidence            999887762  2678899999999999999994

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=2.5e-32  Score=220.70  Aligned_cols=166  Identities=28%  Similarity=0.467  Sum_probs=146.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++|++|||||++|||.++|++|+++|++  |++++|+.+.++.+   ..+.+.++.++++|++|.++++++++++.+
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~---~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDT--VIGTARRTEALDDL---VAAYPDRAEAISLDVTDGERIDVVAADVLA   75 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSGGGGHHH---HHHCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH---HHhccCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999997  99999987665443   333456899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|+|++++.+      +||++||..+.
T Consensus        76 ~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~------~iv~~sS~~~~  142 (281)
T 3m1a_A           76 RYGRVDVLVNNAGRTQ-------VGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSG------SVVNISSFGGQ  142 (281)
T ss_dssp             HHSCCSEEEECCCCEE-------ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             hCCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------EEEEEcCcccc
Confidence            9999999999999874       5667788999999999999999999999999999887655      99999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|++||+++++++++++
T Consensus       143 ~~---~~~~~~Y~~sK~a~~~~~~~la  166 (281)
T 3m1a_A          143 LS---FAGFSAYSATKAALEQLSEGLA  166 (281)
T ss_dssp             CC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCchHHHHHHHHHHHHHHHHH
Confidence            87   6788999999999999999983

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.98  E-value=2.5e-32  Score=218.70  Aligned_cols=166  Identities=23%  Similarity=0.347  Sum_probs=145.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++.+|++++.+.+.+.+   ..++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   77 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAK--VVFGDILDEEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVT   77 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---hcCceEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  999999876554433333   23578899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|+|++++.+      +||++||..+.
T Consensus        78 ~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  144 (260)
T 1nff_A           78 AFGGLHVLVNNAGILN-------IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRG------SIINISSIEGL  144 (260)
T ss_dssp             HHSCCCEEEECCCCCC-------CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEEeehhhc
Confidence            9999999999999864       4567788999999999999999999999999999876654      99999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++++++++
T Consensus       145 ~~---~~~~~~Y~~sK~a~~~~~~~la  168 (260)
T 1nff_A          145 AG---TVACHGYTATKFAVRGLTKSTA  168 (260)
T ss_dssp             SC---CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCchhHHHHHHHHHHHHHHHH
Confidence            77   5778899999999999999984

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.98  E-value=1.1e-31  Score=215.47  Aligned_cols=160  Identities=26%  Similarity=0.344  Sum_probs=144.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++++|+++.           +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~   70 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSK--VIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFK   70 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  9999998754           34688899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|.|++++.+      +||++||..+.
T Consensus        71 ~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~~  137 (264)
T 2dtx_A           71 EYGSISVLVNNAGIES-------YGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDP------SIVNISSVQAS  137 (264)
T ss_dssp             HHSCCCEEEECCCCCC-------CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEECCchhc
Confidence            9999999999999864       4567788999999999999999999999999999887655      99999999888


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+++++|++++ .||
T Consensus       138 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~  164 (264)
T 2dtx_A          138 II---TKNASAYVTSKHAVIGLTKSIALDY  164 (264)
T ss_dssp             SC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCchhHHHHHHHHHHHHHHHHHHh
Confidence            77   577899999999999999999 454

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.98  E-value=1.9e-32  Score=222.37  Aligned_cols=180  Identities=21%  Similarity=0.234  Sum_probs=142.7

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCcccccchhh-cCCCceeEEEecCCC----HHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKN-RFPERLDVLQLDLTV----ESTI   94 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~-~~~~~~~~~~~-~~~~~~~~~~~Dl~~----~~~v   94 (214)
                      ...+++++|++|||||++|||+++|++|+++|++  |++++|+. +.++.+.+.+. ..+.++.++++|++|    ++++
T Consensus        16 ~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~--V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v   93 (288)
T 2x9g_A           16 PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYR--VVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASC   93 (288)
T ss_dssp             ------CCCEEEETTCSSHHHHHHHHHHHHHTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHH
T ss_pred             CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCe--EEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHH
Confidence            3446689999999999999999999999999997  99999988 66555544443 446689999999999    9999


Q ss_pred             HHHHHHHHHHcCCccEEEECccccCCCCCCCCCcch-----hh-----ccHhhhhhheeeechhHHHHHHHHhhHHhcCC
Q 028056           95 EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTL-----NK-----VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG  164 (214)
Q Consensus        95 ~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~  164 (214)
                      +++++++.+.++++|+||||||...       ..++     .+     .+.++|++.+++|+.+++.+++.++|+|++++
T Consensus        94 ~~~~~~~~~~~g~iD~lvnnAG~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~  166 (288)
T 2x9g_A           94 EEIINSCFRAFGRCDVLVNNASAFY-------PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTN  166 (288)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCC-------CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC----
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCC-------CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC
Confidence            9999999999999999999999864       2333     45     78899999999999999999999999998765


Q ss_pred             CCCCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          165 TGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       165 ~~~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .......++||++||..+..+   .++...|+++|+++++|++++ .||
T Consensus       167 ~~~~~~~g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  212 (288)
T 2x9g_A          167 PNCTSSNLSIVNLCDAMVDQP---CMAFSLYNMGKHALVGLTQSAALEL  212 (288)
T ss_dssp             ----CCCEEEEEECCTTTTSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCeEEEEEecccccCC---CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            111111259999999988877   578899999999999999999 444

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.98  E-value=4.8e-32  Score=217.19  Aligned_cols=167  Identities=19%  Similarity=0.249  Sum_probs=146.1

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|++|||||++|||+++|++|+++|++  |++++|+++..+...+.+   ..++.++++|++|+++++++++++.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~d~~~v~~~~~~~~   81 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGAT--VAIADLDVMAAQAVVAGL---ENGGFAVEVDVTKRASVDAAMQKAI   81 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHTC---TTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHH---hcCCeEEEEeCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999997  999999876544433222   2367889999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeecCc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARV  181 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss~~  181 (214)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .+      +||++||..
T Consensus        82 ~~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g------~iv~isS~~  148 (263)
T 3ak4_A           82 DALGGFDLLCANAGVST-------MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKG------VIVNTASLA  148 (263)
T ss_dssp             HHHTCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC------EEEEECCGG
T ss_pred             HHcCCCCEEEECCCcCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCe------EEEEecccc
Confidence            99999999999999864       45677889999999999999999999999999998765 44      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   .++...|+++|+++++|+++++
T Consensus       149 ~~~~---~~~~~~Y~~sK~a~~~~~~~la  174 (263)
T 3ak4_A          149 AKVG---APLLAHYSASKFAVFGWTQALA  174 (263)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cccC---CCCchhHHHHHHHHHHHHHHHH
Confidence            8777   5778899999999999999983

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.98  E-value=1.8e-32  Score=221.05  Aligned_cols=173  Identities=21%  Similarity=0.296  Sum_probs=145.7

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ...+++ |++|||||++|||+++|++|+++|++  |++++|++++++.+.+.+... .++.++++|++|+++++++++++
T Consensus        16 ~~~~~~-k~vlVTGas~gIG~aia~~La~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~   91 (272)
T 2nwq_A           16 RGSHMS-STLFITGATSGFGEACARRFAEAGWS--LVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNL   91 (272)
T ss_dssp             -----C-CEEEESSTTTSSHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTC
T ss_pred             cCCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHH
Confidence            345667 99999999999999999999999997  999999877665544444322 57889999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|+||||||...      ...++.+.+.++|++.+++|+.|++.+++.++|.|++++.|     .+|||+||..
T Consensus        92 ~~~~g~iD~lvnnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g-----~~IV~isS~~  160 (272)
T 2nwq_A           92 PEEFATLRGLINNAGLAL------GTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAG-----ASIVNLGSVA  160 (272)
T ss_dssp             CGGGSSCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTT-----CEEEEECCGG
T ss_pred             HHHhCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----cEEEEeCCch
Confidence            999999999999999763      13567889999999999999999999999999999876432     2999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|+++|+++++|++++ .||
T Consensus       161 ~~~~---~~~~~~Y~asKaa~~~l~~~la~el  189 (272)
T 2nwq_A          161 GKWP---YPGSHVYGGTKAFVEQFSLNLRCDL  189 (272)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hccC---CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            8877   577889999999999999999 444

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.98  E-value=4.3e-32  Score=218.09  Aligned_cols=161  Identities=24%  Similarity=0.341  Sum_probs=142.3

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+..           ..+++|++|.++++++++++.
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~--V~~~~r~~~~~~~~-----------~~~~~Dv~~~~~~~~~~~~~~   89 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGAR--VAVADRAVAGIAAD-----------LHLPGDLREAAYADGLPGAVA   89 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEECSSCCTTSCCS-----------EECCCCTTSHHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHhh-----------hccCcCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999997  99999987654322           234789999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.|      +|||+||..+
T Consensus        90 ~~~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~~  156 (266)
T 3uxy_A           90 AGLGRLDIVVNNAGVIS-------RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGG------AIVNVASCWG  156 (266)
T ss_dssp             HHHSCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCSBT
T ss_pred             HhcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEECCHHh
Confidence            99999999999999875       5678889999999999999999999999999999887655      9999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|++||+|+++|++++ .||
T Consensus       157 ~~~---~~~~~~Y~asKaa~~~l~~~la~e~  184 (266)
T 3uxy_A          157 LRP---GPGHALYCLTKAALASLTQCMGMDH  184 (266)
T ss_dssp             TBC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC---CCCChHHHHHHHHHHHHHHHHHHHh
Confidence            887   678899999999999999999 444

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.98  E-value=1e-31  Score=215.22  Aligned_cols=164  Identities=18%  Similarity=0.271  Sum_probs=144.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|++|||||++|||+++|++|+++|++  |++.+|+.+..+.         .++.++++|++|+++++++++++.+
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~~~~~~   92 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYR--VVATSRSIKPSAD---------PDIHTVAGDISKPETADRIVREGIE   92 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSCCCCSS---------TTEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChhhccc---------CceEEEEccCCCHHHHHHHHHHHHH
Confidence            6688999999999999999999999999997  9999998765332         2688999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++++.+      +||++||..+.
T Consensus        93 ~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~~~  159 (260)
T 3un1_A           93 RFGRIDSLVNNAGVFL-------AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSG------HIVSITTSLVD  159 (260)
T ss_dssp             HHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCTTTT
T ss_pred             HCCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc------EEEEEechhhc
Confidence            9999999999999875       5677889999999999999999999999999999987765      99999998775


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+. +..+...|++||+++++|++++ .||
T Consensus       160 ~~~-~~~~~~~Y~~sKaa~~~l~~~la~e~  188 (260)
T 3un1_A          160 QPM-VGMPSALASLTKGGLNAVTRSLAMEF  188 (260)
T ss_dssp             SCB-TTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCC-CCCccHHHHHHHHHHHHHHHHHHHHh
Confidence            432 1345689999999999999999 454

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.98  E-value=2.2e-32  Score=218.68  Aligned_cols=173  Identities=19%  Similarity=0.201  Sum_probs=147.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHh---cCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLE---KNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~---~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      .++++|++|||||++|||+++|++|++   +|++  |++.+|+++.++.+.+.+...  +.++.++++|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~   79 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSV--MLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLL   79 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCE--EEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCe--EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHH
Confidence            468899999999999999999999999   8997  999999887666554444332  457899999999999999999


Q ss_pred             HHHHH--HcCCcc--EEEECccccCCCCCCCCCcchhh-ccHhhhhhheeeechhHHHHHHHHhhHHhcC--CCCCCCCc
Q 028056           99 KSIKE--KYGSLN--LLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVG--GTGIERDV  171 (214)
Q Consensus        99 ~~~~~--~~~~vd--~lv~nag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~~~~~  171 (214)
                      +++.+  .++++|  +||||||....     ...++.+ .+.++|++.+++|+.|++.+++.++|+|+++  +.      
T Consensus        80 ~~~~~~~~~g~~d~~~lvnnAg~~~~-----~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~------  148 (259)
T 1oaa_A           80 SAVRELPRPEGLQRLLLINNAATLGD-----VSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLS------  148 (259)
T ss_dssp             HHHHHSCCCTTCCEEEEEECCCCCCC-----CSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCE------
T ss_pred             HHHHhccccccCCccEEEECCcccCC-----CCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC------
Confidence            99988  678899  99999997631     1245667 6889999999999999999999999999876  33      


Q ss_pred             eEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       172 ~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ++|||+||..+..+   .++...|++||+++++|++++ .|+
T Consensus       149 g~iv~isS~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~  187 (259)
T 1oaa_A          149 KTVVNISSLCALQP---YKGWGLYCAGKAARDMLYQVLAAEE  187 (259)
T ss_dssp             EEEEEECCGGGTSC---CTTCHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ceEEEEcCchhcCC---CCCccHHHHHHHHHHHHHHHHHhhC
Confidence            49999999998877   578899999999999999999 454

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.98  E-value=6.8e-32  Score=216.54  Aligned_cols=174  Identities=19%  Similarity=0.276  Sum_probs=149.2

Q ss_pred             cccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCC-ceeEEEecCCCHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        23 ~~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      .+++++|++|||||+  +|||+++|++|+++|++  |++.+|+....+.+.++..+.+. ++.+++||++|+++++++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   79 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGAR--LIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFA   79 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHH
Confidence            367899999999999  66999999999999997  99999986544445555555544 79999999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||.....   ....++.+.+.++|++.+++|+.+++.+++.++|+|++.        ++||++||
T Consensus        80 ~~~~~~g~id~li~~Ag~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------g~iv~isS  148 (266)
T 3oig_A           80 SIKEQVGVIHGIAHCIAFANKE---ELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG--------GSIVTLTY  148 (266)
T ss_dssp             HHHHHHSCCCEEEECCCCCCGG---GGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC--------EEEEEEEC
T ss_pred             HHHHHhCCeeEEEEcccccccc---ccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--------ceEEEEec
Confidence            9999999999999999986410   013567789999999999999999999999999998752        39999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+   .++...|++||+|+++|++++ .||
T Consensus       149 ~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~  179 (266)
T 3oig_A          149 LGGELV---MPNYNVMGVAKASLDASVKYLAADL  179 (266)
T ss_dssp             GGGTSC---CTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccc---CCCcchhHHHHHHHHHHHHHHHHHH
Confidence            999887   688899999999999999999 444

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.98  E-value=8.3e-32  Score=218.10  Aligned_cols=171  Identities=22%  Similarity=0.289  Sum_probs=146.9

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ...+++++|++|||||++|||+++|++|+++|++  |++.+|+.+. .+.+.+.+.+.+.++.++.+|++|+++++++++
T Consensus        22 ~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   99 (283)
T 1g0o_A           22 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCK--VIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE   99 (283)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHH
Confidence            4457789999999999999999999999999997  9999988654 333444445556789999999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++++.|+|.  +.|      +||++||
T Consensus       100 ~~~~~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g------~iv~isS  164 (283)
T 1g0o_A          100 EAVKIFGKLDIVCSNSGVVS-------FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGG------RLILMGS  164 (283)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTC------EEEEECC
T ss_pred             HHHHHcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCC------eEEEEec
Confidence            99999999999999999864       45678889999999999999999999999999983  233      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+..+.  .++...|+++|+++++|+++++
T Consensus       165 ~~~~~~~--~~~~~~Y~asK~a~~~~~~~la  193 (283)
T 1g0o_A          165 ITGQAKA--VPKHAVYSGSKGAIETFARCMA  193 (283)
T ss_dssp             GGGTCSS--CSSCHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccCC--CCCCcchHHHHHHHHHHHHHHH
Confidence            9887763  2347899999999999999984

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.98  E-value=4.3e-32  Score=220.97  Aligned_cols=172  Identities=16%  Similarity=0.201  Sum_probs=145.1

Q ss_pred             ccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .++++|++|||||+  +|||+++|++|+++|++  |++.+|++...+.+.++..+. .++.+++||++|+++++++++++
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~  103 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAE--LAFTYQGDALKKRVEPLAEEL-GAFVAGHCDVADAASIDAVFETL  103 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCE--EEEEECSHHHHHHHHHHHHHH-TCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHH
Confidence            46899999999999  45999999999999997  999999854333344433332 46889999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|+||||||.....   ....++.+.+.++|++.+++|+.+++.++++++|+|++.        ++|||+||..
T Consensus       104 ~~~~g~iD~lVnnAG~~~~~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--------g~Iv~isS~~  172 (293)
T 3grk_A          104 EKKWGKLDFLVHAIGFSDKD---ELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG--------GSILTLTYYG  172 (293)
T ss_dssp             HHHTSCCSEEEECCCCCCHH---HHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC--------EEEEEEECGG
T ss_pred             HHhcCCCCEEEECCccCCcc---cccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC--------CEEEEEeehh
Confidence            99999999999999986300   003567789999999999999999999999999999762        4999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .+++..|++||+|+++|++++ .||
T Consensus       173 ~~~~---~~~~~~Y~asKaa~~~l~~~la~e~  201 (293)
T 3grk_A          173 AEKV---MPNYNVMGVAKAALEASVKYLAVDL  201 (293)
T ss_dssp             GTSB---CTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccC---CCchHHHHHHHHHHHHHHHHHHHHH
Confidence            8887   678899999999999999999 444

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.98  E-value=4.3e-32  Score=216.58  Aligned_cols=165  Identities=27%  Similarity=0.366  Sum_probs=138.3

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      .+...+++++|+++||||++|||+++|++|+++|++  |++.+|+++.++           .+.++++|++|++++++++
T Consensus        12 ~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~   78 (253)
T 2nm0_A           12 SGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDK--VAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAY   78 (253)
T ss_dssp             --------CCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHH
T ss_pred             CCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChHhhc-----------cceEEEecCCCHHHHHHHH
Confidence            344457789999999999999999999999999997  999999876533           2678999999999999999


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|.|++++.+      +||++|
T Consensus        79 ~~~~~~~g~iD~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~is  145 (253)
T 2nm0_A           79 KEIEETHGPVEVLIANAGVTK-------DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKG------RVVLIS  145 (253)
T ss_dssp             HHHHHHTCSCSEEEEECSCCT-------TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCE------EEEEEC
T ss_pred             HHHHHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------EEEEEC
Confidence            999999999999999999864       4567788899999999999999999999999999876654      999999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+..+   .++...|+++|+++++|++++ .|+
T Consensus       146 S~~~~~~---~~~~~~Y~asK~a~~~~~~~la~e~  177 (253)
T 2nm0_A          146 SVVGLLG---SAGQANYAASKAGLVGFARSLAREL  177 (253)
T ss_dssp             CCCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCC---CCCcHHHHHHHHHHHHHHHHHHHHh
Confidence            9988776   467889999999999999998 444

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.98  E-value=2.7e-32  Score=218.04  Aligned_cols=171  Identities=19%  Similarity=0.276  Sum_probs=134.8

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .|++++|++|||||++|||+++|++|+++|++  |++++|+.+.      ...+.+.++.++++|++|+++++++++++.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~------~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQ--VVVLDIRGED------VVADLGDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCE--EEEEESSCHH------HHHHTCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCchHH------HHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            47889999999999999999999999999997  8888884422      222335689999999999999999999987


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcch----hhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCC--CCCceEEEE
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTL----NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI--ERDVAVVAN  176 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~--~~~~~~iv~  176 (214)
                      + ++++|+||||||...       ..+.    .+.+.++|++.+++|+.+++.++++++|+|++.....  ....++|||
T Consensus        76 ~-~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~  147 (257)
T 3tl3_A           76 T-MGTLRIVVNCAGTGN-------AIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIIN  147 (257)
T ss_dssp             H-HSCEEEEEECGGGSH-------HHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEE
T ss_pred             H-hCCCCEEEECCCCCC-------CcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEE
Confidence            7 899999999999764       2222    2478999999999999999999999999998731000  011259999


Q ss_pred             eecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          177 LSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       177 iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +||..+..+   .+++..|++||+|+++|+++| .||
T Consensus       148 isS~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~  181 (257)
T 3tl3_A          148 TASVAAFDG---QIGQAAYSASKGGVVGMTLPIARDL  181 (257)
T ss_dssp             ECCCC--CC---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EcchhhcCC---CCCCccHHHHHHHHHHHHHHHHHHh
Confidence            999998887   578899999999999999999 444

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.98  E-value=2.2e-31  Score=211.99  Aligned_cols=159  Identities=20%  Similarity=0.298  Sum_probs=142.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++|++|||||++|||++++++|+++|++  |++.+|+++.        .+.  .+.++.+|++|+++++++++++.+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~--V~~~~r~~~~--------~~~--~~~~~~~D~~d~~~~~~~~~~~~~   70 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAK--VTGFDQAFTQ--------EQY--PFATEVMDVADAAQVAQVCQRLLA   70 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCCCS--------SCC--SSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCchhh--------hcC--CceEEEcCCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999997  9999998752        111  277889999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|+|++++.+      +|||+||..+.
T Consensus        71 ~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g------~iv~isS~~~~  137 (250)
T 2fwm_X           71 ETERLDALVNAAGILR-------MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGG------AIVTVASDAAH  137 (250)
T ss_dssp             HCSCCCEEEECCCCCC-------CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCGGGT
T ss_pred             HcCCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCC------EEEEECchhhC
Confidence            9999999999999864       4567788999999999999999999999999999876655      99999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++|+++++
T Consensus       138 ~~---~~~~~~Y~~sK~a~~~~~~~la  161 (250)
T 2fwm_X          138 TP---RIGMSAYGASKAALKSLALSVG  161 (250)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCCchHHHHHHHHHHHHHHHH
Confidence            77   5788999999999999999984

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.98  E-value=3.6e-32  Score=219.47  Aligned_cols=167  Identities=20%  Similarity=0.262  Sum_probs=139.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh---hcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK---NRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ++++|++|||||++|||++++++|+++|++  |++++|++++++.+.+.+   ...+.++.++.+|++|+++++++++++
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAK--VTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT   80 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHH
Confidence            478999999999999999999999999997  999999877665544433   222457889999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhc----cHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKV----EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      .+.++++|+||||||...       ..++.+.    +.++|++.+++|+.|++.+++.++|+|++++ +      +|||+
T Consensus        81 ~~~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g------~iv~i  146 (278)
T 1spx_A           81 LGKFGKLDILVNNAGAAI-------PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-G------EIVNI  146 (278)
T ss_dssp             HHHHSCCCEEEECCC--------------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEE
T ss_pred             HHHcCCCCEEEECCCCCC-------CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C------eEEEE
Confidence            999999999999999864       3455566    8899999999999999999999999998754 4      99999


Q ss_pred             ecCcc-cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          178 SARVG-SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       178 ss~~~-~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ||..+ ..+   .++...|+++|+++++|+++++
T Consensus       147 sS~~~~~~~---~~~~~~Y~~sK~a~~~~~~~la  177 (278)
T 1spx_A          147 SSIASGLHA---TPDFPYYSIAKAAIDQYTRNTA  177 (278)
T ss_dssp             CCTTSSSSC---CTTSHHHHHHHHHHHHHHHHHH
T ss_pred             ecccccccC---CCCccHHHHHHHHHHHHHHHHH
Confidence            99988 666   5778899999999999999984

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.97  E-value=2.4e-32  Score=215.38  Aligned_cols=164  Identities=20%  Similarity=0.220  Sum_probs=144.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh-cCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      ++|++|||||++|||+++|++|+++|++  |++.+|+.++++...+.+. ..+.++.+++||++|+++++++++++.+.+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYA--LALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF   78 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999997  9999999877666544443 446789999999999999999999999999


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|+||||||...       ..++.+.+.++|++.+++|+.|++.++++++|+|++.+ +      .+|+++|..+..+
T Consensus        79 g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~------~ii~~sS~~~~~~  144 (235)
T 3l77_A           79 GDVDVVVANAGLGY-------FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG-G------LALVTTSDVSARL  144 (235)
T ss_dssp             SSCSEEEECCCCCC-------CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCGGGSSC
T ss_pred             CCCCEEEECCcccc-------ccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-C------cEEEEecchhccc
Confidence            99999999999874       56778899999999999999999999999999995433 3      8899999888777


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHh
Q 028056          186 DNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                         .++...|+++|+++++|++++
T Consensus       145 ---~~~~~~Y~~sKaa~~~~~~~l  165 (235)
T 3l77_A          145 ---IPYGGGYVSTKWAARALVRTF  165 (235)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHH
T ss_pred             ---CCCcchHHHHHHHHHHHHHHH
Confidence               577889999999999999998

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.97  E-value=3.9e-32  Score=224.54  Aligned_cols=175  Identities=21%  Similarity=0.237  Sum_probs=145.8

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCcccccchhh-cCCCceeEEEecCCCHH-----------
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKN-RFPERLDVLQLDLTVES-----------   92 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~-----------   92 (214)
                      +++|++|||||++|||+++|++|+++|++  |++++ |+++.++.+.+.+. ..+.++.++++|++|++           
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~--Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYA--VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------C
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccc
Confidence            88999999999999999999999999997  88888 88766665544443 44668999999999999           


Q ss_pred             ------HHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhcc--------------HhhhhhheeeechhHHHH
Q 028056           93 ------TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVE--------------KSSLMLAYEVNAVGPILV  152 (214)
Q Consensus        93 ------~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l  152 (214)
                            +++++++++.+.++++|+||||||...       ..++.+.+              .++|++.+++|+.+++.+
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-------~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l  194 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-------PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFL  194 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------CCCSCC-------------CHHHHHHHHHHHHHTHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-------CCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence                  999999999999999999999999864       34455566              889999999999999999


Q ss_pred             HHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          153 IKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       153 ~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ++.++|+|++++.......++|||+||..+..+   .++...|+++|+++++|+++| .||
T Consensus       195 ~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~---~~~~~~Y~asKaal~~l~~~la~el  252 (328)
T 2qhx_A          195 IKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP---LLGYTIYTMAKGALEGLTRSAALEL  252 (328)
T ss_dssp             HHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCcCCCCCcEEEEECchhhccC---CCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998765100111249999999998877   578899999999999999999 444

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.97  E-value=6.1e-32  Score=216.51  Aligned_cols=171  Identities=18%  Similarity=0.246  Sum_probs=143.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +++.+|+++||||++|||+++|++|+++|++  |++++|+... .+.+.+.....+.++.+++||++|+++++++++++.
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   80 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYS--VTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAM   80 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCE--EEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            4567899999999999999999999999997  8888776544 333455555556789999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC-c
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR-V  181 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~-~  181 (214)
                      +.++++|+||||||....     ...++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||. .
T Consensus        81 ~~~g~id~lv~~Ag~~~~-----~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~iss~~~  149 (264)
T 3i4f_A           81 SHFGKIDFLINNAGPYVF-----ERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFG------RIINYGFQGA  149 (264)
T ss_dssp             HHHSCCCEEECCCCCCCC-----SCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTTG
T ss_pred             HHhCCCCEEEECCccccc-----CCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCC------eEEEEeechh
Confidence            999999999999994321     24677889999999999999999999999999999887665      99999998 3


Q ss_pred             c-cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 G-SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~-~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      + ..+   .++...|+++|+++++|+++++
T Consensus       150 ~~~~~---~~~~~~Y~asKaa~~~~~~~la  176 (264)
T 3i4f_A          150 DSAPG---WIYRSAFAAAKVGLVSLTKTVA  176 (264)
T ss_dssp             GGCCC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cccCC---CCCCchhHHHHHHHHHHHHHHH
Confidence            3 333   5677899999999999999994

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.97  E-value=3.3e-32  Score=216.62  Aligned_cols=164  Identities=24%  Similarity=0.344  Sum_probs=143.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |+++||||++|||+++|++|+++|++  |++.+|+++.++.+.+.+   +.++.++++|++|+++++++++++.+.++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHK--VIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999997  999999876555443333   3578899999999999999999999999999


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |+||||||...      ...++.+.+.++|++.+++|+.|++.+++.++|+|++++.|      +|||+||..+..+   
T Consensus        76 D~lvnnAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~~~~~---  140 (248)
T 3asu_A           76 DILVNNAGLAL------GMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHG------HIINIGSTAGSWP---  140 (248)
T ss_dssp             CEEEECCCCCC------CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCGGGTSC---
T ss_pred             CEEEECCCcCC------CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------eEEEEccchhccC---
Confidence            99999999752      13567788999999999999999999999999999876655      9999999998877   


Q ss_pred             CCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          189 LGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .++...|+++|+++++|++++ .||
T Consensus       141 ~~~~~~Y~asKaa~~~~~~~la~e~  165 (248)
T 3asu_A          141 YAGGNVYGATKAFVRQFSLNLRTDL  165 (248)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            577899999999999999998 454

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.97  E-value=5.2e-32  Score=217.51  Aligned_cols=172  Identities=19%  Similarity=0.180  Sum_probs=147.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++.+|++|||||++|||+++|++|+++|++ .+++..|+.+..++..+.+...+.++.++.+|++|+++++++++++.+
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~-v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFN-IGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4568899999999999999999999999998 334456666555555555556677899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHh-cCCCCCCCCceEEEEeecCcc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLK-VGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~~~~~~~iv~iss~~~  182 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.+++.|. +++.      ++||++||..+
T Consensus       101 ~~g~id~li~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------g~iv~isS~~~  167 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIAR-------DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQG------GRIITLSSVSG  167 (267)
T ss_dssp             HHCCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC------EEEEEECCHHH
T ss_pred             HhCCccEEEECCCCCC-------CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------cEEEEEcchHh
Confidence            9999999999999875       56778899999999999999999999999999886 4443      49999999998


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+|+++|++++ .||
T Consensus       168 ~~~---~~~~~~Y~asKaa~~~~~~~la~e~  195 (267)
T 4iiu_A          168 VMG---NRGQVNYSAAKAGIIGATKALAIEL  195 (267)
T ss_dssp             HHC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCCchhHHHHHHHHHHHHHHHHHH
Confidence            887   578899999999999999999 444

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.97  E-value=3.1e-32  Score=219.68  Aligned_cols=176  Identities=20%  Similarity=0.263  Sum_probs=139.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCcccccchhhcC-CCceeEEEecCCCH----HHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRF-PERLDVLQLDLTVE----STIEAS   97 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~----~~v~~~   97 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++++| +++.++.+.+.+... +.++.++++|++|+    ++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   84 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFR--VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDI   84 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHH
Confidence            3468999999999999999999999999997  999999 766555544444333 56789999999999    999999


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccH-----------hhhhhheeeechhHHHHHHHHhhHHhcCCCC
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEK-----------SSLMLAYEVNAVGPILVIKHMSPLLKVGGTG  166 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  166 (214)
                      ++++.+.++++|+||||||...       ..++.+.+.           ++|++.+++|+.+++.+++.++|+|+ ++..
T Consensus        85 ~~~~~~~~g~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~  156 (276)
T 1mxh_A           85 IDCSFRAFGRCDVLVNNASAYY-------PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGA  156 (276)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-------CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC------
T ss_pred             HHHHHHhcCCCCEEEECCCCCC-------CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCC
Confidence            9999999999999999999864       344556666           89999999999999999999999987 4431


Q ss_pred             CCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          167 IERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       167 ~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .....++|||+||..+..+   .++...|+++|+++++|++++ .||
T Consensus       157 ~~~~~g~iv~isS~~~~~~---~~~~~~Y~asK~a~~~l~~~la~e~  200 (276)
T 1mxh_A          157 WRSRNLSVVNLCDAMTDLP---LPGFCVYTMAKHALGGLTRAAALEL  200 (276)
T ss_dssp             --CCCEEEEEECCGGGGSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECchhhcCC---CCCCeehHHHHHHHHHHHHHHHHHH
Confidence            1111249999999998877   578899999999999999998 444

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.97  E-value=2e-32  Score=221.75  Aligned_cols=170  Identities=18%  Similarity=0.237  Sum_probs=141.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC------------CcccccchhhcCCCceeEEEecCCCH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------------GATGLLDLKNRFPERLDVLQLDLTVE   91 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~------------~~~~~~~~~~~~~~~~~~~~~Dl~~~   91 (214)
                      .++++|++|||||++|||+++|++|+++|++  |++++|+..            .++...+.+...+.++.+++||++|+
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGAD--IILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCe--EEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            5689999999999999999999999999997  999988732            12223333444567899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCc
Q 028056           92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV  171 (214)
Q Consensus        92 ~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~  171 (214)
                      ++++++++++.+.++++|+||||||...       ..  .+.+.++|++.+++|+.|++.++++++|+|.+.        
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~-------~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------  146 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICP-------LG--AHLPVQAFADAFDVDFVGVINTVHAALPYLTSG--------  146 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCC-------CC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTT--------
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCc-------cc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcC--------
Confidence            9999999999999999999999999864       22  237789999999999999999999999998432        


Q ss_pred             eEEEEeecCcccCCC--------CCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          172 AVVANLSARVGSIGD--------NRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       172 ~~iv~iss~~~~~~~--------~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ++||++||..+..+.        .+.++...|+++|+++++|++++ .||
T Consensus       147 g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~  196 (287)
T 3pxx_A          147 ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQL  196 (287)
T ss_dssp             CEEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHH
Confidence            399999998876642        01156789999999999999999 444

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.97  E-value=8e-32  Score=215.62  Aligned_cols=174  Identities=20%  Similarity=0.136  Sum_probs=143.7

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|++|||||++|||+++|++|+++|++  |++.+|+++.++.+.+.+...+.++.++++|++|+++++++++++.+.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGAT--VYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            367999999999999999999999999997  999999877665554444444667899999999999999999999886


Q ss_pred             -cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          105 -YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       105 -~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                       ++++|+||||||............++.+.+.++|++.+++|+.+++.+++.++|+|++++.|      +|||+||..+.
T Consensus        80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~  153 (260)
T 2qq5_A           80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQG------LIVVISSPGSL  153 (260)
T ss_dssp             HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCC------EEEEECCGGGT
T ss_pred             cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCc------EEEEEcChhhc
Confidence             89999999999531100000013456678889999999999999999999999999877655      99999999887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+    .+...|+++|+++++|+++++
T Consensus       154 ~~----~~~~~Y~asK~a~~~~~~~la  176 (260)
T 2qq5_A          154 QY----MFNVPYGVGKAACDKLAADCA  176 (260)
T ss_dssp             SC----CSSHHHHHHHHHHHHHHHHHH
T ss_pred             CC----CCCCchHHHHHHHHHHHHHHH
Confidence            65    345799999999999999994

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=8.5e-32  Score=216.85  Aligned_cols=172  Identities=19%  Similarity=0.283  Sum_probs=150.7

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|++|||||++|||++++++|+++|++  |++++|+++..+.+.+.+.+.+.++.++.+|++|+++++++++++.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSK--LVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHH
Confidence            36689999999999999999999999999997  9999998876665555555556789999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...       ..++.+.+.+++++.+++|+.+++.+++.+++.|++++.+      +||++||..+
T Consensus       104 ~~~g~iD~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------~iv~isS~~~  170 (272)
T 1yb1_A          104 AEIGDVSILVNNAGVVY-------TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHG------HIVTVASAAG  170 (272)
T ss_dssp             HHTCCCSEEEECCCCCC-------CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCCC-
T ss_pred             HHCCCCcEEEECCCcCC-------CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC------EEEEEechhh
Confidence            99999999999999864       4566778889999999999999999999999999877654      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|++++++++++ .||
T Consensus       171 ~~~---~~~~~~Y~~sK~a~~~l~~~la~e~  198 (272)
T 1yb1_A          171 HVS---VPFLLAYCSSKFAAVGFHKTLTDEL  198 (272)
T ss_dssp             CCC---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCchhHHHHHHHHHHHHHHHHHHH
Confidence            776   567889999999999999998 443

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.97  E-value=1.1e-31  Score=215.61  Aligned_cols=174  Identities=18%  Similarity=0.171  Sum_probs=145.4

Q ss_pred             ccccccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHH
Q 028056           20 ASASVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      .....++++|++|||||+  +|||+++|++|+++|++  |++++|+....+.+.++..+. +++.+++||++|+++++++
T Consensus         6 ~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~   82 (271)
T 3ek2_A            6 HHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAE--LAFTYVGDRFKDRITEFAAEF-GSELVFPCDVADDAQIDAL   82 (271)
T ss_dssp             ---CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHHT-TCCCEEECCTTCHHHHHHH
T ss_pred             CCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCC--EEEEecchhhHHHHHHHHHHc-CCcEEEECCCCCHHHHHHH
Confidence            344577899999999999  99999999999999997  999999854444344444443 4588999999999999999


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhh-ccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      ++++.+.++++|+||||||......   ...++.+ .+.++|++.+++|+.+++.+++.++|+|++.        ++||+
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------g~iv~  151 (271)
T 3ek2_A           83 FASLKTHWDSLDGLVHSIGFAPREA---IAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDD--------ASLLT  151 (271)
T ss_dssp             HHHHHHHCSCEEEEEECCCCCCGGG---GSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEE--------EEEEE
T ss_pred             HHHHHHHcCCCCEEEECCccCcccc---ccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccC--------ceEEE
Confidence            9999999999999999999864100   0134445 8999999999999999999999999998752        39999


Q ss_pred             eecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          177 LSARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       177 iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +||..+..+   .++...|+++|+|+++|+++++
T Consensus       152 isS~~~~~~---~~~~~~Y~asKaa~~~~~~~la  182 (271)
T 3ek2_A          152 LSYLGAERA---IPNYNTMGLAKAALEASVRYLA  182 (271)
T ss_dssp             EECGGGTSB---CTTTTHHHHHHHHHHHHHHHHH
T ss_pred             EeccccccC---CCCccchhHHHHHHHHHHHHHH
Confidence            999998887   6888999999999999999994

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.97  E-value=8.2e-32  Score=218.31  Aligned_cols=171  Identities=22%  Similarity=0.253  Sum_probs=150.3

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++++|+++||||++|||++++++|+++|++  |++.+|+++..+.+.+.+...+.++.++.+|++|+++++++++++
T Consensus        38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~  115 (285)
T 2c07_A           38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSH--VICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKI  115 (285)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSE--EEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHH
Confidence            346788999999999999999999999999997  888888876665555555555668899999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.+++.|++++.+      +||++||..
T Consensus       116 ~~~~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~------~iv~isS~~  182 (285)
T 2c07_A          116 LTEHKNVDILVNNAGITR-------DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYG------RIINISSIV  182 (285)
T ss_dssp             HHHCSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCE------EEEEECCTH
T ss_pred             HHhcCCCCEEEECCCCCC-------CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------EEEEECChh
Confidence            999999999999999864       4567788899999999999999999999999999876554      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   .++...|+++|++++.++++++
T Consensus       183 ~~~~---~~~~~~Y~asK~a~~~~~~~la  208 (285)
T 2c07_A          183 GLTG---NVGQANYSSSKAGVIGFTKSLA  208 (285)
T ss_dssp             HHHC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             hccC---CCCCchHHHHHHHHHHHHHHHH
Confidence            8777   5778899999999999999984

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.97  E-value=5.8e-32  Score=220.80  Aligned_cols=180  Identities=25%  Similarity=0.305  Sum_probs=144.2

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC-CCceeEEEecCCCH-HHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVE-STIEASAKS  100 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~-~~v~~~~~~  100 (214)
                      ...+++|++|||||++|||.++|++|+++|++  |++++|+.++.++..+.+.+. +.++.++.+|++|+ +++++++++
T Consensus         7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~   84 (311)
T 3o26_A            7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIM--VVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADF   84 (311)
T ss_dssp             -----CCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHH
T ss_pred             CccCCCcEEEEecCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHH
Confidence            34578999999999999999999999999997  999999988766654444433 45799999999998 999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCC-----------------------CCCCcchhhccHhhhhhheeeechhHHHHHHHHh
Q 028056          101 IKEKYGSLNLLINASGILSIPNV-----------------------LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMS  157 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  157 (214)
                      +.+.++++|+||||||+......                       .....++.+.+.+++++.+++|+.|++.+++.++
T Consensus        85 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  164 (311)
T 3o26_A           85 IKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLI  164 (311)
T ss_dssp             HHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhh
Confidence            99999999999999998631000                       0001234566889999999999999999999999


Q ss_pred             hHHhcCCCCCCCCceEEEEeecCcccCCCC----------------------------------------CCCCcchhhh
Q 028056          158 PLLKVGGTGIERDVAVVANLSARVGSIGDN----------------------------------------RLGGWHSYRA  197 (214)
Q Consensus       158 ~~l~~~~~~~~~~~~~iv~iss~~~~~~~~----------------------------------------~~~~~~~Y~a  197 (214)
                      |+|++++.+      +||++||..+..+..                                        ..++...|++
T Consensus       165 ~~l~~~~~~------~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  238 (311)
T 3o26_A          165 PLLQLSDSP------RIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTT  238 (311)
T ss_dssp             HHHTTSSSC------EEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHH
T ss_pred             HhhccCCCC------eEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHH
Confidence            999887665      999999998865420                                        0145678999


Q ss_pred             hHHHHHHHHHHhc
Q 028056          198 SKAALNQCKILAM  210 (214)
Q Consensus       198 sKaa~~~~~~~la  210 (214)
                      ||+++++|+++|+
T Consensus       239 SK~a~~~~~~~la  251 (311)
T 3o26_A          239 SKACLNAYTRVLA  251 (311)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999994

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.97  E-value=8.1e-32  Score=213.51  Aligned_cols=169  Identities=22%  Similarity=0.300  Sum_probs=129.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      |++++|+++||||++|||++++++|+++|++  |+++ .|+++..+...+.+...+.++.++++|++|+++++++++++.
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~--V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGAN--IVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAM   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  7777 667665555555555556789999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.+.+.|++++.+      +||++||..+
T Consensus        79 ~~~~~~d~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~  145 (247)
T 2hq1_A           79 DAFGRIDILVNNAGITR-------DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSG------KIINITSIAG  145 (247)
T ss_dssp             HHHSCCCEEEECC----------------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCE------EEEEECC---
T ss_pred             HhcCCCCEEEECCCCCC-------CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcChhh
Confidence            99999999999999764       4556678889999999999999999999999999876654      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|++++.++++++
T Consensus       146 ~~~---~~~~~~Y~~sK~a~~~~~~~la  170 (247)
T 2hq1_A          146 IIG---NAGQANYAASKAGLIGFTKSIA  170 (247)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCCcHhHHHHHHHHHHHHHHH
Confidence            777   5778899999999999999983

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.97  E-value=2.2e-31  Score=212.57  Aligned_cols=171  Identities=19%  Similarity=0.276  Sum_probs=148.5

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|++|||||++|||++++++|+++|++  |++++|+++..+...+.+...+.++.++++|++|+++++++++++.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGAR--VIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  9999998766555555555556689999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...      +..++.+.+.++|++.+++|+.+++.+++.+.++|++++.+      +||++||..+
T Consensus        86 ~~~~~id~vi~~Ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~  153 (260)
T 3awd_A           86 EQEGRVDILVACAGICI------SEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQG------VIVAIGSMSG  153 (260)
T ss_dssp             HHHSCCCEEEECCCCCC------CSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGG
T ss_pred             HHcCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCC------EEEEEecchh
Confidence            99999999999999763      24566788899999999999999999999999999876554      9999999988


Q ss_pred             cCCCCCCCCc--chhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGW--HSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~--~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++.  ..|+++|++++.++++++
T Consensus       154 ~~~---~~~~~~~~Y~~sK~a~~~~~~~l~  180 (260)
T 3awd_A          154 LIV---NRPQQQAAYNASKAGVHQYIRSLA  180 (260)
T ss_dssp             TSC---CSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccc---CCCCCccccHHHHHHHHHHHHHHH
Confidence            776   3444  899999999999999984

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.97  E-value=3e-31  Score=214.07  Aligned_cols=177  Identities=16%  Similarity=0.206  Sum_probs=149.5

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ...+++++|++|||||++|||.+++++|+++|++  |++++|+.+..+.+.+.+...+.++.++++|++|++++++++++
T Consensus        27 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~  104 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGAD--VAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQ  104 (279)
T ss_dssp             GGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCE--EEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHH
Confidence            4456789999999999999999999999999997  99999998776655555544466789999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchh-hccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLN-KVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      +.+.++++|+||||||...      ...++. +.+.++|++.+++|+.+++.+++.+++.|++++.+      +||++||
T Consensus       105 ~~~~~g~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~------~iv~isS  172 (279)
T 3ctm_A          105 QEKDFGTIDVFVANAGVTW------TQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKG------SLIITSS  172 (279)
T ss_dssp             HHHHHSCCSEEEECGGGST------TC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECC
T ss_pred             HHHHhCCCCEEEECCcccc------cCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------eEEEECc
Confidence            9999999999999999764      114445 77889999999999999999999999999876655      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+. ..++...|+++|++++.+++++ .+|
T Consensus       173 ~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~  205 (279)
T 3ctm_A          173 ISGKIVN-IPQLQAPYNTAKAACTHLAKSLAIEW  205 (279)
T ss_dssp             CTTSCC----CCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHhccCC-CCCCcccHHHHHHHHHHHHHHHHHHh
Confidence            9876651 1366789999999999999999 444

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.97  E-value=1.8e-31  Score=211.25  Aligned_cols=166  Identities=15%  Similarity=0.200  Sum_probs=146.5

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCC-------CcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKND-------KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~-------~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ++|++|||||++|||++++++|+++|+       +  |++.+|+++..+.+.+.+...+.++.++++|++|+++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   78 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPV--LVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTT   78 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEE--EEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceE--EEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHH
Confidence            368999999999999999999999999       6  9999998766655555555456689999999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||
T Consensus        79 ~~~~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~isS  145 (244)
T 2bd0_A           79 HIVERYGHIDCLVNNAGVGR-------FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSG------HIFFITS  145 (244)
T ss_dssp             HHHHHTSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC
T ss_pred             HHHHhCCCCCEEEEcCCcCC-------cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------EEEEEec
Confidence            99999999999999999864       4567788999999999999999999999999999876554      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+..+   .++...|+++|+++++|+++++
T Consensus       146 ~~~~~~---~~~~~~Y~~sK~a~~~~~~~la  173 (244)
T 2bd0_A          146 VAATKA---FRHSSIYCMSKFGQRGLVETMR  173 (244)
T ss_dssp             GGGTSC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             chhcCC---CCCCchhHHHHHHHHHHHHHHH
Confidence            988877   5778899999999999999984

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.1e-31  Score=216.07  Aligned_cols=165  Identities=22%  Similarity=0.365  Sum_probs=143.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|++|||||++|||++++++|+++|++  |++++|+++..+.+.+.+    .++.+++||++|+++++++++++.+
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~   78 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGAR--VVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIR   78 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh----cCCeEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  999999876544433322    2478899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...      +..++.+.+.++|++.+++|+.+++.++++++|+|++++ +      +||++||..+.
T Consensus        79 ~~g~iD~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g------~iv~isS~~~~  145 (270)
T 1yde_A           79 RFGRLDCVVNNAGHHP------PPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-G------NVINISSLVGA  145 (270)
T ss_dssp             HHSCCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCHHHH
T ss_pred             HcCCCCEEEECCCCCC------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-C------EEEEEcCcccc
Confidence            9999999999999764      235678889999999999999999999999999997642 3      99999999887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|+++++|+++++
T Consensus       146 ~~---~~~~~~Y~asKaa~~~~~~~la  169 (270)
T 1yde_A          146 IG---QAQAVPYVATKGAVTAMTKALA  169 (270)
T ss_dssp             HC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCCcccHHHHHHHHHHHHHHH
Confidence            77   5778899999999999999984

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.97  E-value=3.1e-31  Score=211.90  Aligned_cols=169  Identities=21%  Similarity=0.299  Sum_probs=147.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++++|++|||||++|||++++++|+++|++  |++.+| +++..+.+.+.+...+.++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAK--VVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999997  999999 6555544444454456678999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeecCc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARV  181 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss~~  181 (214)
                      +.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.+++.|++++ .+      +||++||..
T Consensus        81 ~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~------~iv~isS~~  147 (261)
T 1gee_A           81 KEFGKLDVMINNAGLEN-------PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKG------TVINMSSVH  147 (261)
T ss_dssp             HHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC------EEEEECCGG
T ss_pred             HHcCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCC------EEEEeCCHH
Confidence            99999999999999864       45667888999999999999999999999999998765 44      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   .++...|+++|++++.++++++
T Consensus       148 ~~~~---~~~~~~Y~~sK~a~~~~~~~la  173 (261)
T 1gee_A          148 EKIP---WPLFVHYAASKGGMKLMTETLA  173 (261)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             hcCC---CCCccHHHHHHHHHHHHHHHHH
Confidence            8776   5778999999999999999983

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.97  E-value=1.4e-31  Score=214.60  Aligned_cols=171  Identities=20%  Similarity=0.232  Sum_probs=139.0

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++++|++|||||++|||++++++|+++|++  |++++|++++++...+.+...+.++.++.+|++|+++++++++++
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAV--IHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTV   85 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999997  999999877665554445445667899999999999999999999


Q ss_pred             HHHc-CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          102 KEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       102 ~~~~-~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      .+.+ +++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++++.|+|++++.+      +||++||.
T Consensus        86 ~~~~~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~isS~  152 (266)
T 1xq1_A           86 SSMFGGKLDILINNLGAIR-------SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG------NIIFMSSI  152 (266)
T ss_dssp             HHHHTTCCSEEEEECCC-------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC------EEEEEC--
T ss_pred             HHHhCCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEccc
Confidence            9998 89999999999764       4566778899999999999999999999999999876655      99999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+..+   .++...|+++|++++.++++++
T Consensus       153 ~~~~~---~~~~~~Y~~sK~a~~~~~~~la  179 (266)
T 1xq1_A          153 AGVVS---ASVGSIYSATKGALNQLARNLA  179 (266)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHH
T ss_pred             hhccC---CCCCchHHHHHHHHHHHHHHHH
Confidence            88776   5677899999999999999984

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.97  E-value=3.2e-31  Score=210.88  Aligned_cols=169  Identities=21%  Similarity=0.289  Sum_probs=147.9

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|++|||||++|||++++++|+++|++  |++++|+++..+.+.+.+...+.++.++.+|++|+++++++++++.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   83 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGAS--VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            56789999999999999999999999999997  9999998766555555555556688999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...       ..++ +.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||..+
T Consensus        84 ~~~~~~d~vi~~Ag~~~-------~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~  149 (255)
T 1fmc_A           84 SKLGKVDILVNNAGGGG-------PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG------VILTITSMAA  149 (255)
T ss_dssp             HHHSSCCEEEECCCCCC-------CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGG
T ss_pred             HhcCCCCEEEECCCCCC-------CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc------EEEEEcchhh
Confidence            99999999999999864       2334 67889999999999999999999999999876554      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|++++.++++++
T Consensus       150 ~~~---~~~~~~Y~~sK~a~~~~~~~~~  174 (255)
T 1fmc_A          150 ENK---NINMTSYASSKAAASHLVRNMA  174 (255)
T ss_dssp             TCC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCCcccHHHHHHHHHHHHHHH
Confidence            776   5778899999999999999984

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.97  E-value=2.5e-31  Score=214.09  Aligned_cols=173  Identities=21%  Similarity=0.276  Sum_probs=147.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      ++|++|||||++|||+++|++|+++|++  |++. .|+.+..+.+.+.+.+.+.++.++.+|++|+++++++++++.+.+
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWR--VGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            5799999999999999999999999998  6554 777766666666666667789999999999999999999999999


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|+||||||...      ...++.+.+.++|++.+++|+.|++.+++.++|.|++...+   ..++||++||..+..+
T Consensus       103 g~id~li~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~  173 (272)
T 4e3z_A          103 GRLDGLVNNAGIVD------YPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSG---QGGAIVNVSSMAAILG  173 (272)
T ss_dssp             SCCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCTHHHHC
T ss_pred             CCCCEEEECCCCCC------CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccC---CCCEEEEEcchHhccC
Confidence            99999999999875      23677889999999999999999999999999999763111   1159999999998877


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .  .+++..|+++|+++++|++++ .||
T Consensus       174 ~--~~~~~~Y~asKaa~~~~~~~la~e~  199 (272)
T 4e3z_A          174 S--ATQYVDYAASKAAIDTFTIGLAREV  199 (272)
T ss_dssp             C--TTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C--CCCcchhHHHHHHHHHHHHHHHHHH
Confidence            3  336788999999999999999 444

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=8.1e-32  Score=216.15  Aligned_cols=164  Identities=18%  Similarity=0.216  Sum_probs=140.0

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|+++||||++|||++++++|+++|++  |++++|+++.+++..+.+   ..++.++++|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGAS--LVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEE   77 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999997  999999876554433322   357889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.+.|+| ++ .+      +|||+||..+. 
T Consensus        78 ~g~iD~lvnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g------~iv~isS~~~~-  141 (263)
T 2a4k_A           78 FGRLHGVAHFAGVAH-------SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GG------SLVLTGSVAGL-  141 (263)
T ss_dssp             HSCCCEEEEGGGGTT-------TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TC------EEEEECCCTTC-
T ss_pred             cCCCcEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CC------EEEEEecchhc-
Confidence            999999999999864       4567788999999999999999999999999999 44 33      99999999887 


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|+++|+++++|++++ .||
T Consensus       142 ~---~~~~~~Y~asK~a~~~~~~~la~e~  167 (263)
T 2a4k_A          142 G---AFGLAHYAAGKLGVVGLARTLALEL  167 (263)
T ss_dssp             C---HHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred             C---CCCcHHHHHHHHHHHHHHHHHHHHh
Confidence            5   577889999999999999998 444

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.97  E-value=1.1e-30  Score=211.16  Aligned_cols=170  Identities=14%  Similarity=0.144  Sum_probs=143.3

Q ss_pred             ccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .++++|++|||||+  +|||.++|++|+++|++  |++.+|+. ..+.+.++..+ ..++.+++||++|+++++++++++
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~--V~~~~r~~-~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~   97 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAE--LAFTYVGQ-FKDRVEKLCAE-FNPAAVLPCDVISDQEIKDLFVEL   97 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCE--EEEEECTT-CHHHHHHHHGG-GCCSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCE--EEEeeCch-HHHHHHHHHHh-cCCceEEEeecCCHHHHHHHHHHH
Confidence            45789999999988  77999999999999997  99999987 22223333233 346889999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhh-ccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      .+.++++|+||||||......   ...++.+ .+.++|++.+++|+.+++.+++.++|+|+++ .      ++||++||.
T Consensus        98 ~~~~g~id~li~nAg~~~~~~---~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~------g~iv~isS~  167 (280)
T 3nrc_A           98 GKVWDGLDAIVHSIAFAPRDQ---LEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-N------ASMVALTYI  167 (280)
T ss_dssp             HHHCSSCCEEEECCCCCCGGG---SSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-T------CEEEEEECG
T ss_pred             HHHcCCCCEEEECCccCCCcc---cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-C------CeEEEEecc
Confidence            999999999999999864100   0144555 8999999999999999999999999999865 3      399999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+..+   .++...|+++|+|+++|+++++
T Consensus       168 ~~~~~---~~~~~~Y~asKaal~~~~~~la  194 (280)
T 3nrc_A          168 GAEKA---MPSYNTMGVAKASLEATVRYTA  194 (280)
T ss_dssp             GGTSC---CTTTHHHHHHHHHHHHHHHHHH
T ss_pred             ccccC---CCCchhhHHHHHHHHHHHHHHH
Confidence            99887   6888999999999999999984

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.97  E-value=7e-31  Score=210.17  Aligned_cols=173  Identities=18%  Similarity=0.240  Sum_probs=145.4

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++++|+++||||++|||.+++++|+++|++  |++++|+.+..+...+.+   +.++.++++|++|+++++++++++.
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~   81 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGAS--AVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAK   81 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999997  999999987765543333   5678999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchh------hccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLN------KVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      +.++++|+||||||...       ..+..      +.+.++|++.+++|+.+++.+++.+.|+|+++........++||+
T Consensus        82 ~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~  154 (265)
T 2o23_A           82 GKFGRVDVAVNCAGIAV-------ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIIN  154 (265)
T ss_dssp             HHHSCCCEEEECCCCCC-------CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEE
T ss_pred             HHCCCCCEEEECCccCC-------CCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEE
Confidence            99999999999999864       12222      468889999999999999999999999998762111112259999


Q ss_pred             eecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          177 LSARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       177 iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +||..+..+   .++...|+++|+++++++++++
T Consensus       155 isS~~~~~~---~~~~~~Y~~sK~a~~~~~~~la  185 (265)
T 2o23_A          155 TASVAAFEG---QVGQAAYSASKGGIVGMTLPIA  185 (265)
T ss_dssp             ECCTHHHHC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             eCChhhcCC---CCCCchhHHHHHHHHHHHHHHH
Confidence            999988777   5778899999999999999984

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.97  E-value=2e-31  Score=211.25  Aligned_cols=169  Identities=24%  Similarity=0.322  Sum_probs=147.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-CCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +++++|+++||||++|||++++++|+++|++  |++++|++++.+.+.+.+.+ .+.++.++.+|++|+++++++++++.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGST--VIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIY   80 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            5688999999999999999999999999997  99999987665554443332 35678999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...       ..++.+.+.+++++.+++|+.+++.+++.+++.|++++.+      +||++||..+
T Consensus        81 ~~~~~~d~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~  147 (248)
T 2pnf_A           81 NLVDGIDILVNNAGITR-------DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWG------RIVNISSVVG  147 (248)
T ss_dssp             HHSSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCE------EEEEECCHHH
T ss_pred             HhcCCCCEEEECCCCCC-------CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc------EEEEEccHHh
Confidence            99999999999999764       4566788899999999999999999999999999876654      9999999887


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|+++++++++++
T Consensus       148 ~~~---~~~~~~Y~~sK~a~~~~~~~la  172 (248)
T 2pnf_A          148 FTG---NVGQVNYSTTKAGLIGFTKSLA  172 (248)
T ss_dssp             HHC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCCchHHHHHHHHHHHHHHHH
Confidence            776   4677899999999999999984

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.97  E-value=5.8e-31  Score=209.05  Aligned_cols=169  Identities=23%  Similarity=0.330  Sum_probs=146.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++||||++|||++++++|+++|++  |++++|+++..+...+.+.. ..++.++.+|++|+++++++++++.+
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAK--VMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhhc-cCceEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999997  99999987655544333322 25788999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.+++.|++++.+     ++||++||..+.
T Consensus        79 ~~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~-----~~iv~isS~~~~  146 (251)
T 1zk4_A           79 AFGPVSTLVNNAGIAV-------NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLG-----ASIINMSSIEGF  146 (251)
T ss_dssp             HHSSCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC-----EEEEEECCGGGT
T ss_pred             HhCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC-----CEEEEeCCchhc
Confidence            9999999999999864       4566788899999999999999999999999999887651     399999999888


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|++++.++++++
T Consensus       147 ~~---~~~~~~Y~~sK~a~~~~~~~~a  170 (251)
T 1zk4_A          147 VG---DPSLGAYNASKGAVRIMSKSAA  170 (251)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCCccchHHHHHHHHHHHHHH
Confidence            77   5778999999999999999984

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.97  E-value=6.8e-31  Score=212.38  Aligned_cols=180  Identities=16%  Similarity=0.216  Sum_probs=146.0

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++++|++|||||++|||+++|++|+++|++  |++++|+.+.++++.+.+   +.++.+++||++|+++++++++++
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~--Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLG--VVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999997  999999877655544333   568999999999999999999999


Q ss_pred             HHHcCCccEEEECc-cccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          102 KEKYGSLNLLINAS-GILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       102 ~~~~~~vd~lv~na-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                       +.++++|++|||+ |.......  ......+.+.++|++.+++|+.+++.+++.+.+.|.+.........++||++||.
T Consensus        99 -~~~~~id~lv~~aag~~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  175 (281)
T 3ppi_A           99 -NQLGRLRYAVVAHGGFGVAQRI--VQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASI  175 (281)
T ss_dssp             -TTSSEEEEEEECCCCCCCCCCS--BCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCG
T ss_pred             -HHhCCCCeEEEccCcccccccc--cccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecc
Confidence             8889999999994 44321000  0111246788999999999999999999999999987322212223599999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+..+   .++...|+++|+|+++|+++| .||
T Consensus       176 ~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~  205 (281)
T 3ppi_A          176 AGYEG---QIGQTAYAAAKAGVIGLTIAAARDL  205 (281)
T ss_dssp             GGTSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCC---CCCCcccHHHHHHHHHHHHHHHHHH
Confidence            99888   678899999999999999999 444

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.97  E-value=8.3e-31  Score=209.60  Aligned_cols=176  Identities=18%  Similarity=0.243  Sum_probs=147.2

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc-cchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      .+.+++++|++|||||++|||++++++|+++|++  |++++|+.+..+.. .++....+.++.++++|++|+++++++++
T Consensus         7 ~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~   84 (265)
T 1h5q_A            7 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGAN--VAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ   84 (265)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEE--EEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCcccCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHH
Confidence            4457789999999999999999999999999997  99999987665432 22223335678999999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.+.+.|.+++.+     ++||++||
T Consensus        85 ~~~~~~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-----~~iv~~sS  152 (265)
T 1h5q_A           85 QIDADLGPISGLIANAGVSV-------VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQK-----GSIVVTSS  152 (265)
T ss_dssp             HHHHHSCSEEEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECC
T ss_pred             HHHHhcCCCCEEEECCCcCC-------CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCC-----ceEEEeCC
Confidence            99999999999999999864       4567788999999999999999999999999999865431     49999999


Q ss_pred             CcccCCCC----CCCCcchhhhhHHHHHHHHHHhc
Q 028056          180 RVGSIGDN----RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       180 ~~~~~~~~----~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+..+..    +..+...|+++|++++.++++++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la  187 (265)
T 1h5q_A          153 MSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLA  187 (265)
T ss_dssp             GGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHH
T ss_pred             chhhccccccccccccccccHHHHHHHHHHHHHHH
Confidence            88766521    11226899999999999999984

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.97  E-value=3.6e-31  Score=211.76  Aligned_cols=169  Identities=22%  Similarity=0.284  Sum_probs=145.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC-------CceeEEEecCCCHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-------ERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~v~~   96 (214)
                      .++++|+++||||++|||++++++|+++|++  |++.+|+++..+.+.+.+...+       .++.++++|++|++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGAT--VAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC   80 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence            4578999999999999999999999999997  9999998766555444333333       578899999999999999


Q ss_pred             HHHHHHHHcCCc-cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEE
Q 028056           97 SAKSIKEKYGSL-NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVV  174 (214)
Q Consensus        97 ~~~~~~~~~~~v-d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~i  174 (214)
                      +++++.+.++++ |+||||||...       ..++.+.+.++|++.+++|+.|++.+++++.++|.+++ .+      +|
T Consensus        81 ~~~~~~~~~g~i~d~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g------~i  147 (264)
T 2pd6_A           81 LLEQVQACFSRPPSVVVSCAGITQ-------DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRG------SI  147 (264)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE------EE
T ss_pred             HHHHHHHHhCCCCeEEEECCCcCC-------CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCc------eE
Confidence            999999999999 99999999864       45677889999999999999999999999999998755 33      99


Q ss_pred             EEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          175 ANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       175 v~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      |++||..+..+   .++...|+++|++++.++++++
T Consensus       148 v~isS~~~~~~---~~~~~~Y~~sK~a~~~~~~~la  180 (264)
T 2pd6_A          148 INISSIVGKVG---NVGQTNYAASKAGVIGLTQTAA  180 (264)
T ss_dssp             EEECCTHHHHC---CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             EEECChhhccC---CCCChhhHHHHHHHHHHHHHHH
Confidence            99999988777   5778999999999999999984

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.97  E-value=5.5e-31  Score=209.06  Aligned_cols=168  Identities=23%  Similarity=0.362  Sum_probs=144.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh-hcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-NRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +|+++||||++|||++++++|+++|++  |++++|+++..+.+.+.+ ...+.++.++++|++|+++++++++++.+.++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDR--VAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            689999999999999999999999997  999999876655544333 33356789999999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|+||||||.....    +...+.+.+.+++++.+++|+.+++.+++.++|.|++++.+      +||++||..+..+ 
T Consensus        80 ~id~li~~Ag~~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~~-  148 (250)
T 2cfc_A           80 AIDVLVNNAGITGNS----EAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAG------VIVNIASVASLVA-  148 (250)
T ss_dssp             CCCEEEECCCCCCCT----TCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTSC-
T ss_pred             CCCEEEECCCCCCCC----CcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC------EEEEECChhhccC-
Confidence            999999999976410    11227788899999999999999999999999999876654      9999999988877 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .++...|+++|++++.++++++
T Consensus       149 --~~~~~~Y~~sK~a~~~~~~~l~  170 (250)
T 2cfc_A          149 --FPGRSAYTTSKGAVLQLTKSVA  170 (250)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             --CCCchhHHHHHHHHHHHHHHHH
Confidence              5778899999999999999984

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.97  E-value=1.4e-30  Score=211.04  Aligned_cols=169  Identities=17%  Similarity=0.278  Sum_probs=141.9

Q ss_pred             cccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        25 ~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ++++|++|||||+  +|||+++|++|+++|++  |++++|+++ .+. +.++....+ ++.++++|++|+++++++++++
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~--V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~   93 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQ--LAFTYATPK-LEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFL   93 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCE--EEEEESSGG-GHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCE--EEEEeCCHH-HHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHH
Confidence            3889999999999  99999999999999997  999999874 322 233222223 4788999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|+||||||......   ...++.+.+.++|++.+++|+.|++.+++.++|+|++++ |      +|||+||..
T Consensus        94 ~~~~g~iD~lv~~Ag~~~~~~---~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g------~iv~isS~~  163 (285)
T 2p91_A           94 EENWGSLDIIVHSIAYAPKEE---FKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRN-G------AIVTLSYYG  163 (285)
T ss_dssp             HHHTSCCCEEEECCCCCCGGG---GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSC-C------EEEEEECGG
T ss_pred             HHHcCCCCEEEECCCCCCccc---CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C------EEEEEccch
Confidence            999999999999999764100   014577889999999999999999999999999997542 3      999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   .+++..|+++|+++++|+++++
T Consensus       164 ~~~~---~~~~~~Y~~sK~a~~~~~~~la  189 (285)
T 2p91_A          164 AEKV---VPHYNVMGIAKAALESTVRYLA  189 (285)
T ss_dssp             GTSB---CTTTTHHHHHHHHHHHHHHHHH
T ss_pred             hccC---CCCccHHHHHHHHHHHHHHHHH
Confidence            8777   5778899999999999999984

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.97  E-value=8.2e-31  Score=211.41  Aligned_cols=170  Identities=22%  Similarity=0.283  Sum_probs=142.9

Q ss_pred             cccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        25 ~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ++++|++|||||+  +|||+++|++|+++|++  |++++|+++ .+. ..++....+ ++.++++|++|+++++++++++
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~--V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~   78 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGAT--LAFTYLNES-LEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSV   78 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCE--EEEEESSTT-THHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCE--EEEEeCCHH-HHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHH
Confidence            4789999999999  99999999999999997  999999886 333 333322223 4789999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|+||||||......   ...++.+.+.++|++.+++|+.+++.+++.++|+|++.        ++|||+||..
T Consensus        79 ~~~~g~id~lv~nAg~~~~~~---~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~isS~~  147 (275)
T 2pd4_A           79 KKDLGSLDFIVHSVAFAPKEA---LEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNG--------ASVLTLSYLG  147 (275)
T ss_dssp             HHHTSCEEEEEECCCCCCGGG---GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEECGG
T ss_pred             HHHcCCCCEEEECCccCcccc---CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC--------CEEEEEecch
Confidence            999999999999999864100   01467788999999999999999999999999999742        3999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .+++..|+++|+++++|++++ .++
T Consensus       148 ~~~~---~~~~~~Y~asK~a~~~~~~~la~e~  176 (275)
T 2pd4_A          148 STKY---MAHYNVMGLAKAALESAVRYLAVDL  176 (275)
T ss_dssp             GTSB---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCC---CCCchhhHHHHHHHHHHHHHHHHHh
Confidence            8877   577889999999999999998 443

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.97  E-value=4.9e-31  Score=211.22  Aligned_cols=172  Identities=22%  Similarity=0.309  Sum_probs=142.9

Q ss_pred             cccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        23 ~~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      .+++++|++|||||+  +|||+++|++|+++|++  |++++|+++ .+. ..++....+ .+.++++|++|+++++++++
T Consensus         3 ~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~--V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~   78 (261)
T 2wyu_A            3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAE--VALSYQAER-LRPEAEKLAEALG-GALLFRADVTQDEELDALFA   78 (261)
T ss_dssp             EECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCE--EEEEESCGG-GHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCE--EEEEcCCHH-HHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHH
Confidence            356889999999999  99999999999999997  999999874 222 333322223 47889999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.+.++++|+||||||......   ...++.+.+.++|++.+++|+.+++.+++++.|+|++.        ++|||+||
T Consensus        79 ~~~~~~g~iD~lv~~Ag~~~~~~---~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~isS  147 (261)
T 2wyu_A           79 GVKEAFGGLDYLVHAIAFAPREA---MEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--------GGIVTLTY  147 (261)
T ss_dssp             HHHHHHSSEEEEEECCCCCCHHH---HSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--------EEEEEEEC
T ss_pred             HHHHHcCCCCEEEECCCCCCccc---CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccC--------CEEEEEec
Confidence            99999999999999999763000   01456788999999999999999999999999998642        39999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+   .++...|+++|+++++|++++ .||
T Consensus       148 ~~~~~~---~~~~~~Y~asK~a~~~~~~~la~e~  178 (261)
T 2wyu_A          148 YASEKV---VPKYNVMAIAKAALEASVRYLAYEL  178 (261)
T ss_dssp             GGGTSB---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCC---CCCchHHHHHHHHHHHHHHHHHHHH
Confidence            988777   577889999999999999998 444

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.97  E-value=2.6e-31  Score=211.67  Aligned_cols=168  Identities=24%  Similarity=0.286  Sum_probs=145.6

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEE-eecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .+++|++|||||++|||+++|++|+++|++  |++ ..|+.+..++..+.+...+.++.++.+|++|.++++++++++.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGAL--VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDN   81 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCe--EEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999997  655 56666666665556666677899999999999999999999987


Q ss_pred             HcC------CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056          104 KYG------SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus       104 ~~~------~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      .++      ++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++.        ++||++
T Consensus        82 ~~~~~~~~~~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------~~iv~i  146 (255)
T 3icc_A           82 ELQNRTGSTKFDILINNAGIGP-------GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--------SRIINI  146 (255)
T ss_dssp             HHHHHHSSSCEEEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--------EEEEEE
T ss_pred             HhcccccCCcccEEEECCCCCC-------CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCC--------CEEEEe
Confidence            654      4999999999864       5677889999999999999999999999999998543        399999


Q ss_pred             ecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          178 SARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       178 ss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ||..+..+   .++...|+++|+++++|++++ .||
T Consensus       147 sS~~~~~~---~~~~~~Y~asKaa~~~~~~~la~e~  179 (255)
T 3icc_A          147 SSAATRIS---LPDFIAYSMTKGAINTMTFTLAKQL  179 (255)
T ss_dssp             CCGGGTSC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CChhhccC---CCCcchhHHhHHHHHHHHHHHHHHH
Confidence            99998887   688899999999999999999 444

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.97  E-value=6.6e-31  Score=214.25  Aligned_cols=175  Identities=12%  Similarity=0.151  Sum_probs=150.4

Q ss_pred             ccccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC-CCceeEEEecCCCHHHHHH
Q 028056           18 SSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        18 ~~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~   96 (214)
                      .+..+..++++|+++||||++|||+++|++|+++|++  |++++|+.+..+...+.+.+. +.++.++++|++|.+++++
T Consensus        16 ~~~~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~   93 (302)
T 1w6u_A           16 KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQ--CVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQN   93 (302)
T ss_dssp             SCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHH
T ss_pred             CCCCCcccCCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHH
Confidence            3444567789999999999999999999999999997  999999886655544433332 5679999999999999999


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhc-CCCCCCCCceEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV-GGTGIERDVAVVA  175 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~~~~~~~iv  175 (214)
                      +++++.+.++++|+||||||...       ..++.+.+.+++++.+++|+.+++.+++.+.++|.+ .+.      ++||
T Consensus        94 ~~~~~~~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~~iv  160 (302)
T 1w6u_A           94 TVSELIKVAGHPNIVINNAAGNF-------ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKG------AAFL  160 (302)
T ss_dssp             HHHHHHHHTCSCSEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC------EEEE
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-------CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC------CEEE
Confidence            99999999999999999999764       456778889999999999999999999999999973 333      4999


Q ss_pred             EeecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          176 NLSARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       176 ~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ++||..+..+   .++...|+++|+++++++++++
T Consensus       161 ~isS~~~~~~---~~~~~~Y~~sK~a~~~~~~~la  192 (302)
T 1w6u_A          161 SITTIYAETG---SGFVVPSASAKAGVEAMSKSLA  192 (302)
T ss_dssp             EECCTHHHHC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             EEcccccccC---CCCcchhHHHHHHHHHHHHHHH
Confidence            9999988777   5778899999999999999984

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.97  E-value=1.1e-30  Score=210.33  Aligned_cols=175  Identities=18%  Similarity=0.256  Sum_probs=146.2

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      |..+.+++++|++|||||++|||++++++|+++|++  |++++|+.+..+.+.+.+.. ..++.++.+|++|++++++++
T Consensus         7 ~~~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~   83 (278)
T 2bgk_A            7 PDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAK--VVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLV   83 (278)
T ss_dssp             ----CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCcccccCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHH
Confidence            445557789999999999999999999999999997  88899886554433333322 237899999999999999999


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +++.+.++++|+||||||....     ...++.+.+.++|++.+++|+.+++.+++.+.++|++++.+      +||++|
T Consensus        84 ~~~~~~~~~id~li~~Ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~is  152 (278)
T 2bgk_A           84 DTTIAKHGKLDIMFGNVGVLST-----TPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG------SIVFTA  152 (278)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCS-----SCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCE------EEEEEC
T ss_pred             HHHHHHcCCCCEEEECCcccCC-----CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC------eEEEEe
Confidence            9999999999999999997641     12456788899999999999999999999999999876654      999999


Q ss_pred             cCcccCCCCCCC-CcchhhhhHHHHHHHHHHhc
Q 028056          179 ARVGSIGDNRLG-GWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       179 s~~~~~~~~~~~-~~~~Y~asKaa~~~~~~~la  210 (214)
                      |..+..+   .+ +...|+++|+++++++++++
T Consensus       153 S~~~~~~---~~~~~~~Y~~sK~a~~~~~~~la  182 (278)
T 2bgk_A          153 SISSFTA---GEGVSHVYTATKHAVLGLTTSLC  182 (278)
T ss_dssp             CGGGTCC---CTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             eccccCC---CCCCCcchHHHHHHHHHHHHHHH
Confidence            9988776   34 67899999999999999984

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.97  E-value=1.7e-31  Score=236.35  Aligned_cols=169  Identities=21%  Similarity=0.279  Sum_probs=143.2

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC---------CCcccccchhhcCCCceeEEEecCCCHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP---------NGATGLLDLKNRFPERLDVLQLDLTVEST   93 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~   93 (214)
                      .+++++|+++||||++|||+++|++|+++|++  |++.+++.         +.++.+.+.+...+.++   .+|++|.++
T Consensus         3 ~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~--Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~   77 (604)
T 2et6_A            3 PVDFKDKVVIITGAGGGLGKYYSLEFAKLGAK--VVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLD   77 (604)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTC
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCE--EEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHH
Confidence            35689999999999999999999999999997  88888765         33444444444444433   368888888


Q ss_pred             HHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceE
Q 028056           94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV  173 (214)
Q Consensus        94 v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~  173 (214)
                      ++++++++.+.+|++|+||||||+..       ..++.+.+.++|++.+++|+.|+|+++|+++|+|++++.|      +
T Consensus        78 ~~~~v~~~~~~~G~iDiLVnNAGi~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G------~  144 (604)
T 2et6_A           78 GDKIVETAVKNFGTVHVIINNAGILR-------DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYG------R  144 (604)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------E
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------E
Confidence            99999999999999999999999864       5677889999999999999999999999999999887655      9


Q ss_pred             EEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          174 VANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       174 iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |||+||..+..+   .++...|++||+|+.+|+++| .|+
T Consensus       145 IVnisS~ag~~~---~~~~~~Y~asKaal~~lt~~la~El  181 (604)
T 2et6_A          145 IVNTSSPAGLYG---NFGQANYASAKSALLGFAETLAKEG  181 (604)
T ss_dssp             EEEECCHHHHHC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCHHHcCC---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            999999999887   578899999999999999999 444

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.97  E-value=8.7e-31  Score=208.39  Aligned_cols=167  Identities=21%  Similarity=0.280  Sum_probs=143.8

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCce-eEEEecCCCHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERL-DVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ..+++++|+++||||++|||++++++|+++|++  |++++|++++++.+.+.+   +.++ .++.+|++|++++++++++
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGAR--LILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHH
Confidence            446789999999999999999999999999997  999999876554433332   3456 8899999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+ ++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||.
T Consensus        80 ~~~-~~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~isS~  145 (254)
T 2wsb_A           80 AEA-VAPVSILVNSAGIAR-------LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAG------AIVNLGSM  145 (254)
T ss_dssp             HHH-HSCCCEEEECCCCCC-------CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCG
T ss_pred             HHh-hCCCcEEEECCccCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc------EEEEEecc
Confidence            988 899999999999864       4566778889999999999999999999999999876654      99999999


Q ss_pred             cccCCCCCCCCc--chhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGDNRLGGW--HSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~~~~~~~--~~Y~asKaa~~~~~~~la  210 (214)
                      .+..+   .++.  ..|+++|++++.++++++
T Consensus       146 ~~~~~---~~~~~~~~Y~~sK~a~~~~~~~~~  174 (254)
T 2wsb_A          146 SGTIV---NRPQFASSYMASKGAVHQLTRALA  174 (254)
T ss_dssp             GGTSC---CSSSCBHHHHHHHHHHHHHHHHHH
T ss_pred             hhccC---CCCCcchHHHHHHHHHHHHHHHHH
Confidence            88776   3445  899999999999999984

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.2e-30  Score=210.82  Aligned_cols=173  Identities=22%  Similarity=0.245  Sum_probs=146.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC--CceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .++++|++|||||++|||++++++|+++|++  |++++|++++++.+.+.+...+  .++.++.+|++|+++++++++++
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  105 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLK--VVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI  105 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            3588999999999999999999999999997  9999998776655544444333  46888999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.+++.|++++..    .++||++||..
T Consensus       106 ~~~~g~iD~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~----~g~iv~isS~~  174 (279)
T 1xg5_A          106 RSQHSGVDICINNAGLAR-------PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVD----DGHIININSMS  174 (279)
T ss_dssp             HHHHCCCSEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC----SCEEEEECCGG
T ss_pred             HHhCCCCCEEEECCCCCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC----CceEEEEcChh
Confidence            999999999999999864       4566778899999999999999999999999999876530    13999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +... .+.++...|+++|++++.|+++++
T Consensus       175 ~~~~-~~~~~~~~Y~~sK~a~~~~~~~la  202 (279)
T 1xg5_A          175 GHRV-LPLSVTHFYSATKYAVTALTEGLR  202 (279)
T ss_dssp             GTSC-CSCGGGHHHHHHHHHHHHHHHHHH
T ss_pred             hccc-CCCCCCchhHHHHHHHHHHHHHHH
Confidence            8632 125677899999999999999983

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.97  E-value=1.2e-30  Score=205.45  Aligned_cols=163  Identities=28%  Similarity=0.328  Sum_probs=142.2

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      ..+|+++||||++|||++++++|+++|++  |++++|+++.++.+.+.+    .++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYR--VGLMARDEKRLQALAAEL----EGALPLPGDVREEGDWARAVAAMEEAF   76 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHh----hhceEEEecCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999997  999999876544333222    268889999999999999999999999


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.+++.|++++.+      +||++||..+..+
T Consensus        77 ~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~------~iv~isS~~~~~~  143 (234)
T 2ehd_A           77 GELSALVNNAGVGV-------MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGG------TIVNVGSLAGKNP  143 (234)
T ss_dssp             SCCCEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE------EEEEECCTTTTSC
T ss_pred             CCCCEEEECCCcCC-------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc------EEEEECCchhcCC
Confidence            99999999999764       4567788999999999999999999999999999887654      9999999988776


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                         .++...|+++|+++++++++++
T Consensus       144 ---~~~~~~Y~~sK~a~~~~~~~la  165 (234)
T 2ehd_A          144 ---FKGGAAYNASKFGLLGLAGAAM  165 (234)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             ---CCCCchhhHHHHHHHHHHHHHH
Confidence               5778899999999999999984

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.97  E-value=4.8e-31  Score=233.44  Aligned_cols=167  Identities=26%  Similarity=0.324  Sum_probs=143.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||++|||+++|++|+++|++  |++.++.  ..+.+.+.+.+.+.++..+.+|++  ++.+++++++.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~--Vv~~~~~--~~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~  391 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAK--VVVNDFK--DATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVID  391 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEECSS--CCHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCE--EEEEeCc--cHHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHH
Confidence            4789999999999999999999999999997  8888763  234444444445667788888884  456778899999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +++++|+||||||+..       ..++.+.+.++|++.+++|+.|+|+++|+++|+|++++.|      +|||+||..+.
T Consensus       392 ~~G~iDiLVnNAGi~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~IVnisS~ag~  458 (604)
T 2et6_A          392 KYGTIDILVNNAGILR-------DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFG------RIINITSTSGI  458 (604)
T ss_dssp             HHSCCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCHHHH
T ss_pred             hcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------EEEEECChhhc
Confidence            9999999999999874       5678899999999999999999999999999999877655      99999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .+++..|++||+|+.+|+++| .|+
T Consensus       459 ~~---~~~~~~Y~asKaal~~lt~~la~El  485 (604)
T 2et6_A          459 YG---NFGQANYSSSKAGILGLSKTMAIEG  485 (604)
T ss_dssp             SC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCChhHHHHHHHHHHHHHHHHHHh
Confidence            87   578899999999999999999 454

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.97  E-value=3e-31  Score=210.74  Aligned_cols=167  Identities=22%  Similarity=0.257  Sum_probs=131.3

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      ++.+..++++|++|||||++|||+++|++|+++|++  |++.+|+.+.++.+.+.+   ..++.++.+|+++.+++.+++
T Consensus         5 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~   79 (249)
T 3f9i_A            5 HHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSK--VIISGSNEEKLKSLGNAL---KDNYTIEVCNLANKEECSNLI   79 (249)
T ss_dssp             ----CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHH
T ss_pred             CccccccCCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHh---ccCccEEEcCCCCHHHHHHHH
Confidence            445567889999999999999999999999999997  999999877655443333   457889999999999988877


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +++    +++|++|||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++|
T Consensus        80 ~~~----~~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g------~iv~is  142 (249)
T 3f9i_A           80 SKT----SNLDILVCNAGITS-------DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYG------RIINIS  142 (249)
T ss_dssp             HTC----SCCSEEEECCC--------------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEC
T ss_pred             Hhc----CCCCEEEECCCCCC-------CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc------EEEEEc
Confidence            654    78999999999875       4556778889999999999999999999999999877655      999999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      |..+..+   .++...|+++|+++++|+++++
T Consensus       143 S~~~~~~---~~~~~~Y~~sK~a~~~~~~~la  171 (249)
T 3f9i_A          143 SIVGIAG---NPGQANYCASKAGLIGMTKSLS  171 (249)
T ss_dssp             CCCC--C---CSCSHHHHHHHHHHHHHHHHHH
T ss_pred             cHHhccC---CCCCchhHHHHHHHHHHHHHHH
Confidence            9998887   5788999999999999999993

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.97  E-value=1e-30  Score=209.76  Aligned_cols=169  Identities=15%  Similarity=0.206  Sum_probs=141.2

Q ss_pred             ccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        26 l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +++|++|||||+  +|||+++|++|+++|++  |++++|++ ..+. ..++....+ ...++++|++|+++++++++++.
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~--V~~~~r~~-~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAE--LAFTYQND-KLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCE--EEEEESST-TTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCE--EEEEcCcH-HHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHH
Confidence            789999999999  99999999999999997  99999987 3333 333322223 35789999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhh-ccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNK-VEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      +.++++|+||||||......   ...++.+ .+.++|++.+++|+.+++.++++++|+|++.        ++||++||..
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~---~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~isS~~  151 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQ---LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--------SALLTLSYLG  151 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGG---GSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEECGG
T ss_pred             HHcCCCCEEEECCCCCCccc---cCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC--------CEEEEEcchh
Confidence            99999999999999763000   0145677 8899999999999999999999999998642        3999999998


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .+++..|+++|+++++|++++ .||
T Consensus       152 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~e~  180 (265)
T 1qsg_A          152 AERA---IPNYNVMGLAKASLEANVRYMANAM  180 (265)
T ss_dssp             GTSB---CTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccC---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            8877   577889999999999999998 444

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.5e-30  Score=206.66  Aligned_cols=159  Identities=23%  Similarity=0.278  Sum_probs=136.6

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|++|||||++|||++++++|+++|++  |++.+|++++++.+. .+    .++.++++|++|+++++    ++.+.
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~----~~~~~   71 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAK--VIATDINESKLQELE-KY----PGIQTRVLDVTKKKQID----QFANE   71 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHH----HHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHH----HHHHH
Confidence            478999999999999999999999999997  999999876554433 11    26889999999999987    44456


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.+++.++++++|+|++++.+      +||++||..+..
T Consensus        72 ~~~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~  138 (246)
T 2ag5_A           72 VERLDVLFNVAGFVH-------HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG------NIINMSSVASSV  138 (246)
T ss_dssp             CSCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCSBTTT
T ss_pred             hCCCCEEEECCccCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------eEEEEechHhCc
Confidence            689999999999864       4567788999999999999999999999999999876654      999999998877


Q ss_pred             CCCCCC-CcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLG-GWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~-~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .+ +...|+++|+++++++++++
T Consensus       139 ~---~~~~~~~Y~~sK~a~~~~~~~la  162 (246)
T 2ag5_A          139 K---GVVNRCVYSTTKAAVIGLTKSVA  162 (246)
T ss_dssp             B---CCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             C---CCCCCccHHHHHHHHHHHHHHHH
Confidence            6   34 78899999999999999984

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.97  E-value=1e-30  Score=208.15  Aligned_cols=172  Identities=22%  Similarity=0.289  Sum_probs=147.1

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC-CCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++++|+++||||++|||++++++|+++|++  |++++|+ ++.++.+.+.+...+.++.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAK--VGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999997  9999998 6666655555555566899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC--CCCCCCceEEEEeecCc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG--TGIERDVAVVANLSARV  181 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~~~~~~~iv~iss~~  181 (214)
                      .++++|+||||||...      +..++.+.+.+++++.+++|+.+++.+++.++|.|.+++  .+   ..++||++||..
T Consensus        82 ~~g~id~vi~~Ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~---~~~~iv~~sS~~  152 (258)
T 3afn_B           82 KFGGIDVLINNAGGLV------GRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASG---QTSAVISTGSIA  152 (258)
T ss_dssp             HHSSCSEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHT---SCEEEEEECCTH
T ss_pred             HcCCCCEEEECCCCcC------CcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCC---CCcEEEEecchh
Confidence            9999999999999732      245677888999999999999999999999999987543  20   114999999998


Q ss_pred             ccC-CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSI-GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~-~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +.. +   .++...|+++|++++.++++++
T Consensus       153 ~~~~~---~~~~~~Y~~sK~a~~~~~~~~~  179 (258)
T 3afn_B          153 GHTGG---GPGAGLYGAAKAFLHNVHKNWV  179 (258)
T ss_dssp             HHHCC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             hccCC---CCCchHHHHHHHHHHHHHHHHH
Confidence            876 5   5678899999999999999984

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.97  E-value=5.9e-31  Score=208.16  Aligned_cols=165  Identities=26%  Similarity=0.352  Sum_probs=144.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEE-eecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIA-TCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ||+++||||++|||++++++|+++|++  |++ .+|+++..+.+.+.+...+.++.++++|++|+++++++++++.+.++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~--v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCK--VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999997  766 57877665554444444466789999999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.+.++|++++.+      +||++||..+..+ 
T Consensus        79 ~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~-  144 (244)
T 1edo_A           79 TIDVVVNNAGITR-------DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG------RIINIASVVGLIG-  144 (244)
T ss_dssp             CCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHHHC-
T ss_pred             CCCEEEECCCCCC-------CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC------EEEEECChhhcCC-
Confidence            9999999999864       4567788899999999999999999999999999876554      9999999988777 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        .++...|+++|+++++++++++
T Consensus       145 --~~~~~~Y~~sK~a~~~~~~~la  166 (244)
T 1edo_A          145 --NIGQANYAAAKAGVIGFSKTAA  166 (244)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             --CCCCccchhhHHHHHHHHHHHH
Confidence              5778899999999999999984

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.97  E-value=3.6e-30  Score=206.35  Aligned_cols=185  Identities=30%  Similarity=0.414  Sum_probs=145.4

Q ss_pred             ccccccccccccCcEEEEecCCCchhHHHHHHHHhcC---CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHH
Q 028056           16 FTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKN---DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVES   92 (214)
Q Consensus        16 ~~~~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g---~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   92 (214)
                      ..+|.....++++|++|||||++|||++++++|+++|   ++  |++++|+.+..+.+.++.. .+.++.++.+|++|++
T Consensus         9 ~~~~~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~--V~~~~r~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~   85 (267)
T 1sny_A            9 HHSSGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQH--LFTTCRNREQAKELEDLAK-NHSNIHILEIDLRNFD   85 (267)
T ss_dssp             -----------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSE--EEEEESCTTSCHHHHHHHH-HCTTEEEEECCTTCGG
T ss_pred             hhcccccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcE--EEEEecChhhhHHHHHhhc-cCCceEEEEecCCChH
Confidence            3455566678899999999999999999999999999   65  9999999887665443332 2567999999999999


Q ss_pred             HHHHHHHHHHHHcC--CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcC------C
Q 028056           93 TIEASAKSIKEKYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG------G  164 (214)
Q Consensus        93 ~v~~~~~~~~~~~~--~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~  164 (214)
                      +++++++++.+.++  ++|+||||||...      +..++.+.+.+++++.+++|+.+++.+++.+++.|+++      +
T Consensus        86 ~v~~~~~~~~~~~g~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  159 (267)
T 1sny_A           86 AYDKLVADIEGVTKDQGLNVLFNNAGIAP------KSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQ  159 (267)
T ss_dssp             GHHHHHHHHHHHHGGGCCSEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred             HHHHHHHHHHHhcCCCCccEEEECCCcCC------CccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccc
Confidence            99999999999888  8999999999864      24567788899999999999999999999999999865      2


Q ss_pred             CCCCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          165 TGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       165 ~~~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      . .....++||++||..+..+..+.++...|+++|+++++|+++++
T Consensus       160 ~-~~~~~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la  204 (267)
T 1sny_A          160 P-MGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLS  204 (267)
T ss_dssp             C-SSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             c-ccCCCceEEEEecccccccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            0 00001499999999887764323467889999999999999984

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.97  E-value=1.8e-30  Score=210.46  Aligned_cols=170  Identities=21%  Similarity=0.225  Sum_probs=144.7

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC-CceeEEEecCCCHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ...+++|+++||||++|||++++++|+++|++  |++++|+++.++.+.+.+.+.+ .++.++.+|++|.++++++++++
T Consensus        23 ~~~~~~k~vlITGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  100 (286)
T 1xu9_A           23 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAH--VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQA  100 (286)
T ss_dssp             GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHH
Confidence            45688999999999999999999999999997  9999998877665544444333 37889999999999999999999


Q ss_pred             HHHcCCccEEEEC-ccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          102 KEKYGSLNLLINA-SGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       102 ~~~~~~vd~lv~n-ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      .+.++++|+|||| +|...        .+..+.+.+++++.+++|+.|++.+++.++|.|++++ |      +||++||.
T Consensus       101 ~~~~g~iD~li~naag~~~--------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g------~iv~isS~  165 (286)
T 1xu9_A          101 GKLMGGLDMLILNHITNTS--------LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-G------SIVVVSSL  165 (286)
T ss_dssp             HHHHTSCSEEEECCCCCCC--------CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEEEEG
T ss_pred             HHHcCCCCEEEECCccCCC--------CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCC-C------EEEEECCc
Confidence            9999999999999 56542        2334567899999999999999999999999987643 3      99999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+..+   .++...|++||++++++++++ .|+
T Consensus       166 ~~~~~---~~~~~~Y~asK~a~~~~~~~l~~e~  195 (286)
T 1xu9_A          166 AGKVA---YPMVAAYSASKFALDGFFSSIRKEY  195 (286)
T ss_dssp             GGTSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccC---CCCccHHHHHHHHHHHHHHHHHHHH
Confidence            98877   577899999999999999998 444

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.97  E-value=8.4e-31  Score=215.73  Aligned_cols=169  Identities=19%  Similarity=0.280  Sum_probs=141.9

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec---------CCCCcccccchhhcCCCceeEEEecCCCHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR---------NPNGATGLLDLKNRFPERLDVLQLDLTVEST   93 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~   93 (214)
                      .+++++|++|||||++|||+++|++|+++|++  |++.++         +.++.+...+.+...+..   ..+|++|.++
T Consensus         4 ~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~--Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~   78 (319)
T 1gz6_A            4 PLRFDGRVVLVTGAGGGLGRAYALAFAERGAL--VVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEA   78 (319)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGG
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEcCCcccccccCCHHHHHHHHHHHHhhCCe---EEEeCCCHHH
Confidence            36789999999999999999999999999997  887654         443344333344333332   3589999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceE
Q 028056           94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV  173 (214)
Q Consensus        94 v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~  173 (214)
                      ++++++++.+.++++|+||||||+..       ..++.+.+.++|+..+++|+.|++.++++++|+|++++.+      +
T Consensus        79 ~~~~~~~~~~~~g~iD~lVnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g------r  145 (319)
T 1gz6_A           79 GEKLVKTALDTFGRIDVVVNNAGILR-------DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG------R  145 (319)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE------E
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC------E
Confidence            99999999999999999999999874       4567788999999999999999999999999999877654      9


Q ss_pred             EEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          174 VANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       174 iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ||++||..+..+   .+++..|++||+++++|+++| .++
T Consensus       146 IV~vsS~~~~~~---~~~~~~Y~aSK~a~~~~~~~la~el  182 (319)
T 1gz6_A          146 IIMTASASGIYG---NFGQANYSAAKLGLLGLANTLVIEG  182 (319)
T ss_dssp             EEEECCHHHHHC---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEECChhhccC---CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            999999988777   467889999999999999999 444

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=2.5e-30  Score=210.97  Aligned_cols=172  Identities=19%  Similarity=0.217  Sum_probs=146.0

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-----CCCceeEEEecCCCHHHH
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-----FPERLDVLQLDLTVESTI   94 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~v   94 (214)
                      .....++++|+++||||++|||+++|++|+++|++  |++++|+.+.++...+.+..     .+.++.++++|++|++++
T Consensus        10 ~~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v   87 (303)
T 1yxm_A           10 YLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSN--VVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEV   87 (303)
T ss_dssp             SBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHH
T ss_pred             ccCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHH
Confidence            34445789999999999999999999999999997  99999987665554443332     356799999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEE
Q 028056           95 EASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVV  174 (214)
Q Consensus        95 ~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~i  174 (214)
                      +++++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++++.+.+.+.+.      ++|
T Consensus        88 ~~~~~~~~~~~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~------~~i  154 (303)
T 1yxm_A           88 NNLVKSTLDTFGKINFLVNNGGGQF-------LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHG------GSI  154 (303)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHC------EEE
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC------CeE
Confidence            9999999999999999999999753       456778889999999999999999999999996544333      399


Q ss_pred             EEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          175 ANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       175 v~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      |++||.. ..+   .++...|+++|+++++++++++
T Consensus       155 v~isS~~-~~~---~~~~~~Y~~sK~a~~~~~~~la  186 (303)
T 1yxm_A          155 VNIIVPT-KAG---FPLAVHSGAARAGVYNLTKSLA  186 (303)
T ss_dssp             EEECCCC-TTC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeec-ccC---CCcchhhHHHHHHHHHHHHHHH
Confidence            9999987 554   5778899999999999999994

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.97  E-value=1.8e-30  Score=208.66  Aligned_cols=172  Identities=21%  Similarity=0.256  Sum_probs=146.0

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCcccccchhhcCCCceeEEEecCCCHHHHHHH
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      |..+.+++++|++|||||++|||++++++|+++|++  |++.+| +++..+.+.+.+...+.++.++++|++|+++++++
T Consensus        12 ~~~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~--v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   89 (274)
T 1ja9_A           12 PSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGAS--VVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVAL   89 (274)
T ss_dssp             ----CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            444557889999999999999999999999999997  888888 55544444444544567889999999999999999


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      ++++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.+++.|++ + +      +||++
T Consensus        90 ~~~~~~~~~~~d~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~------~iv~~  154 (274)
T 1ja9_A           90 FDKAVSHFGGLDFVMSNSGMEV-------WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-G------RIILT  154 (274)
T ss_dssp             HHHHHHHHSCEEEEECCCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-E------EEEEE
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-------CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-C------EEEEE
Confidence            9999999999999999999864       456778899999999999999999999999999873 2 3      99999


Q ss_pred             ecCccc-CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          178 SARVGS-IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       178 ss~~~~-~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ||..+. .+   .++...|+++|++++.++++++
T Consensus       155 sS~~~~~~~---~~~~~~Y~~sK~a~~~~~~~~~  185 (274)
T 1ja9_A          155 SSIAAVMTG---IPNHALYAGSKAAVEGFCRAFA  185 (274)
T ss_dssp             CCGGGTCCS---CCSCHHHHHHHHHHHHHHHHHH
T ss_pred             cChHhccCC---CCCCchHHHHHHHHHHHHHHHH
Confidence            999887 44   5778899999999999999984

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.97  E-value=1.6e-30  Score=214.75  Aligned_cols=164  Identities=24%  Similarity=0.299  Sum_probs=140.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc------CCCceeEEEecCCCHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR------FPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ++|++|||||++|||+++|++|+++|++  |++++|+....+...+.+..      .+.++.++.+|++|++++++++++
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~--v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   78 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQ--SFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARER   78 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTC--CEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCc--eEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHH
Confidence            4789999999999999999999999998  77777776665544333322      235789999999999999999998


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.  ++++|+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|+|++++.+      +|||+||.
T Consensus        79 ~~--~g~iD~lVnnAG~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g------~IV~isS~  143 (327)
T 1jtv_A           79 VT--EGRVDVLVCNAGLGL-------LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG------RVLVTGSV  143 (327)
T ss_dssp             CT--TSCCSEEEECCCCCC-------CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEEEG
T ss_pred             Hh--cCCCCEEEECCCcCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC------EEEEECCc
Confidence            83  479999999999764       4567788999999999999999999999999999876654      99999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+..+   .++...|++||+++++|+++++
T Consensus       144 ~~~~~---~~~~~~Y~aSK~a~~~~~~~la  170 (327)
T 1jtv_A          144 GGLMG---LPFNDVYCASKFALEGLCESLA  170 (327)
T ss_dssp             GGTSC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccC---CCCChHHHHHHHHHHHHHHHHH
Confidence            98887   5778899999999999999994

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.97  E-value=2.2e-30  Score=204.87  Aligned_cols=165  Identities=25%  Similarity=0.281  Sum_probs=143.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCcccccchhhcCCCceeE-EEecCCCHHHHHHHHHHHHHHc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDV-LQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +|+++||||++|||++++++|+++|++  |++. +|+++..+.+.+.+...+.++.. +.+|++|.++++++++++.+.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~--v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFA--LAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCE--EEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            479999999999999999999999997  7776 88876655554444444566777 8999999999999999999999


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|+||||||...       ..++.+.+.+++++.+++|+.+++.+++.+++.|++++.+      +||++||..+..+
T Consensus        79 ~~~d~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~  145 (245)
T 2ph3_A           79 GGLDTLVNNAGITR-------DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFG------RIVNITSVVGILG  145 (245)
T ss_dssp             TCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHHHC
T ss_pred             CCCCEEEECCCCCC-------CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCC------EEEEEeChhhccC
Confidence            99999999999864       4567788999999999999999999999999999876654      9999999988777


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                         .++...|+++|+++++++++++
T Consensus       146 ---~~~~~~Y~~sK~a~~~~~~~la  167 (245)
T 2ph3_A          146 ---NPGQANYVASKAGLIGFTRAVA  167 (245)
T ss_dssp             ---CSSBHHHHHHHHHHHHHHHHHH
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHH
Confidence               4778899999999999999984

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=9.1e-30  Score=201.52  Aligned_cols=175  Identities=32%  Similarity=0.454  Sum_probs=144.4

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcC--CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKN--DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g--~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++|+++||||++|||++++++|+++|  ++  |++++|+.+..+.+.+.   .+.++.++.+|++|+++++++++++.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~--V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRH--IIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCE--EEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcE--EEEEecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999  75  99999988766544332   256789999999999999999999999


Q ss_pred             HcC--CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcC------CCCCCCCceEEE
Q 028056          104 KYG--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG------GTGIERDVAVVA  175 (214)
Q Consensus       104 ~~~--~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~~~~~~~iv  175 (214)
                      .++  ++|+||||||...      +..++.+.+.+++++.+++|+.+++.+++++++.|+++      +. .....++||
T Consensus        76 ~~g~~~id~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~iv  148 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLL------SYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQ-LSVSRAAVI  148 (250)
T ss_dssp             HHGGGCCCEEEECCCCCC------CBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSC-CCTTTCEEE
T ss_pred             hcCCCCCcEEEECCcccC------CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCc-ccCCCcEEE
Confidence            988  9999999999764      24566778889999999999999999999999999765      30 000024999


Q ss_pred             EeecCcccCCCCCC----CCcchhhhhHHHHHHHHHHh-ccc
Q 028056          176 NLSARVGSIGDNRL----GGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       176 ~iss~~~~~~~~~~----~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ++||..+..+....    ++...|+++|++++++++++ .++
T Consensus       149 ~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~  190 (250)
T 1yo6_A          149 TISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDL  190 (250)
T ss_dssp             EECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHh
Confidence            99999887763211    56789999999999999998 444

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.97  E-value=6.9e-30  Score=203.45  Aligned_cols=164  Identities=18%  Similarity=0.101  Sum_probs=136.7

Q ss_pred             ccccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHH
Q 028056           18 SSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        18 ~~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      ++..+..+..+|++|||||++|||+++|++|+++|++  |++++|+++..+.            ..+.+|++|.++++++
T Consensus        12 ~~~~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~--V~~~~r~~~~~~~------------~~~~~d~~d~~~v~~~   77 (251)
T 3orf_A           12 SGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWN--TISIDFRENPNAD------------HSFTIKDSGEEEIKSV   77 (251)
T ss_dssp             ----------CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCTTSS------------EEEECSCSSHHHHHHH
T ss_pred             ccccccccccCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCcccccc------------cceEEEeCCHHHHHHH
Confidence            3344445556899999999999999999999999997  9999998865331            2578899999999999


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      ++++.+.++++|+||||||...      +...+.+.+.++|++.+++|+.|++.++++++++|++.        ++||++
T Consensus        78 ~~~~~~~~g~iD~li~~Ag~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~i  143 (251)
T 3orf_A           78 IEKINSKSIKVDTFVCAAGGWS------GGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG--------GLFVLT  143 (251)
T ss_dssp             HHHHHTTTCCEEEEEECCCCCC------CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEE
T ss_pred             HHHHHHHcCCCCEEEECCccCC------CCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC--------CEEEEE
Confidence            9999999999999999999875      22336678889999999999999999999999998763        399999


Q ss_pred             ecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          178 SARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       178 ss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ||..+..+   .++...|+++|+++++|++++ .||
T Consensus       144 sS~~~~~~---~~~~~~Y~~sKaa~~~~~~~la~e~  176 (251)
T 3orf_A          144 GASAALNR---TSGMIAYGATKAATHHIIKDLASEN  176 (251)
T ss_dssp             CCGGGGSC---CTTBHHHHHHHHHHHHHHHHHTSTT
T ss_pred             echhhccC---CCCCchhHHHHHHHHHHHHHHHHHh
Confidence            99999887   688899999999999999999 554

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.97  E-value=4.3e-30  Score=203.12  Aligned_cols=160  Identities=20%  Similarity=0.209  Sum_probs=138.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|+++||||++|||++++++|+++|++  |++++|++++   ..+.+   +  +.++++|++| ++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~--V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYR--VAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            689999999999999999999999997  9999998754   22222   2  7789999999 9999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.+      +||++||..+..+..
T Consensus        71 id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~~~~  137 (239)
T 2ekp_A           71 LHVLVHAAAVNV-------RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWG------RVLFIGSVTTFTAGG  137 (239)
T ss_dssp             CCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTSCCT
T ss_pred             CCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECchhhccCCC
Confidence            999999999864       4567788999999999999999999999999999876654      999999998877621


Q ss_pred             CCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          188 RLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                       .++...|+++|+++++|++++ .|+
T Consensus       138 -~~~~~~Y~~sK~a~~~~~~~la~e~  162 (239)
T 2ekp_A          138 -PVPIPAYTTAKTALLGLTRALAKEW  162 (239)
T ss_dssp             -TSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHh
Confidence             267889999999999999998 444

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.97  E-value=4.6e-30  Score=206.41  Aligned_cols=169  Identities=15%  Similarity=0.250  Sum_probs=141.0

Q ss_pred             cccCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        25 ~l~~k~vlItG~--s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ++++|++|||||  ++|||+++|++|+++|++  |++.+|+.++ .+.+.   .+.+.++.++++|++|+++++++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~   78 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQ--LVLTGFDRLRLIQRIT---DRLPAKAPLLELDVQNEEHLASLAGRV   78 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCE--EEEEECSCHHHHHHHH---TTSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCE--EEEEecChHHHHHHHH---HhcCCCceEEEccCCCHHHHHHHHHHH
Confidence            478999999999  999999999999999997  9999998754 22222   233557889999999999999999999


Q ss_pred             HHHcC---CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056          102 KEKYG---SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus       102 ~~~~~---~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      .+.++   ++|+||||||......  ....++.+.+.++|++.+++|+.+++.+++.++|+|++.        ++||++|
T Consensus        79 ~~~~g~~~~iD~lv~nAg~~~~~~--~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~is  148 (269)
T 2h7i_A           79 TEAIGAGNKLDGVVHSIGFMPQTG--MGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--------GSIVGMD  148 (269)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGG--STTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEE
T ss_pred             HHHhCCCCCceEEEECCccCcccc--ccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--------CeEEEEc
Confidence            99999   9999999999763100  002567788999999999999999999999999999753        3999999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+ .+   .+++..|+++|+++++|++++ .||
T Consensus       149 s~~~-~~---~~~~~~Y~asKaa~~~l~~~la~e~  179 (269)
T 2h7i_A          149 FDPS-RA---MPAYNWMTVAKSALESVNRFVAREA  179 (269)
T ss_dssp             CCCS-SC---CTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             Cccc-cc---cCchHHHHHHHHHHHHHHHHHHHHh
Confidence            9765 33   577889999999999999999 444

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.97  E-value=5.2e-30  Score=202.91  Aligned_cols=158  Identities=13%  Similarity=0.083  Sum_probs=137.5

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ..++|++|||||++|||++++++|+++|++  |++.+|+++..+          ....++++|++|+++++++++++.+.
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~   71 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWW--VASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKL   71 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCE--EEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999997  999999876533          13567789999999999999999999


Q ss_pred             c--CCccEEEECccccCCCCCCCCCcch-hhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          105 Y--GSLNLLINASGILSIPNVLQPETTL-NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       105 ~--~~vd~lv~nag~~~~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      +  +++|+||||||...       ..++ .+.+.++|++.+++|+.+++.+++.++|+|++.        ++||++||..
T Consensus        72 ~~~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--------g~iv~isS~~  136 (241)
T 1dhr_A           72 LGDQKVDAILCVAGGWA-------GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--------GLLTLAGAKA  136 (241)
T ss_dssp             HTTCCEEEEEECCCCCC-------CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCGG
T ss_pred             hCCCCCCEEEEcccccC-------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--------CEEEEECCHH
Confidence            8  79999999999864       3455 677889999999999999999999999998652        3999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|+++|+++++|++++ .||
T Consensus       137 ~~~~---~~~~~~Y~asK~a~~~~~~~la~e~  165 (241)
T 1dhr_A          137 ALDG---TPGMIGYGMAKGAVHQLCQSLAGKN  165 (241)
T ss_dssp             GGSC---CTTBHHHHHHHHHHHHHHHHHTSTT
T ss_pred             HccC---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            8877   578899999999999999999 454

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=5.2e-30  Score=202.22  Aligned_cols=157  Identities=11%  Similarity=0.057  Sum_probs=137.2

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      |++|++|||||++|||++++++|+++|++  |++++|+++..+          ....++++|++|+++++++++++.+.+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYT--VLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEE--EEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999997  999999876533          125677899999999999999999998


Q ss_pred             --CCccEEEECccccCCCCCCCCCcch-hhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          106 --GSLNLLINASGILSIPNVLQPETTL-NKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       106 --~~vd~lv~nag~~~~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                        +++|+||||||...       ..++ .+.+.++|++.+++|+.+++.+++.++|+|++.        ++||++||..+
T Consensus        69 ~~g~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~isS~~~  133 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWA-------GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--------GLLQLTGAAAA  133 (236)
T ss_dssp             TTCCEEEEEECCCCCC-------CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCGGG
T ss_pred             CCCCCCEEEECCcccC-------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC--------CEEEEECchhh
Confidence              79999999999864       3445 677889999999999999999999999998652        39999999998


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+++++|++++ .||
T Consensus       134 ~~~---~~~~~~Y~~sK~a~~~~~~~la~e~  161 (236)
T 1ooe_A          134 MGP---TPSMIGYGMAKAAVHHLTSSLAAKD  161 (236)
T ss_dssp             GSC---CTTBHHHHHHHHHHHHHHHHHHSTT
T ss_pred             ccC---CCCcHHHHHHHHHHHHHHHHHHHHh
Confidence            877   578899999999999999999 555

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.97  E-value=3.3e-30  Score=202.59  Aligned_cols=159  Identities=16%  Similarity=0.155  Sum_probs=138.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |++|||||++|||+++|++|+++|++  |++.+|+++.++.+.+.   .+.++.++.+|++|.++++++++++.+.   +
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~---~   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKA--TYLTGRSESKLSTVTNC---LSNNVGYRARDLASHQEVEQLFEQLDSI---P   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCC--EEEEESCHHHHHHHHHT---CSSCCCEEECCTTCHHHHHHHHHSCSSC---C
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHH---HhhccCeEeecCCCHHHHHHHHHHHhhc---C
Confidence            68999999999999999999999998  99999988765543333   3567899999999999999998877543   4


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |+||||||...       ..++.+.+.++|++.+++|+.|++.+++.++|+|++++       ++||++||..+..+   
T Consensus        74 d~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~~iv~isS~~~~~~---  136 (230)
T 3guy_A           74 STVVHSAGSGY-------FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-------VNVVMIMSTAAQQP---  136 (230)
T ss_dssp             SEEEECCCCCC-------CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-------CEEEEECCGGGTSC---
T ss_pred             CEEEEeCCcCC-------CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CeEEEEeecccCCC---
Confidence            99999999864       56778899999999999999999999999999998764       29999999998887   


Q ss_pred             CCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          189 LGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .++...|+++|+++++|++++ .|+
T Consensus       137 ~~~~~~Y~asKaa~~~~~~~la~e~  161 (230)
T 3guy_A          137 KAQESTYCAVKWAVKGLIESVRLEL  161 (230)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHH
Confidence            678899999999999999999 444

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.96  E-value=8.3e-30  Score=202.09  Aligned_cols=153  Identities=27%  Similarity=0.277  Sum_probs=133.0

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~-~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .++|++|||||++|||+++|++|++ .|+.  |++.+|+++..          ..++.++++|++|+++++++++.+.  
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~--v~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~--   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHT--VINIDIQQSFS----------AENLKFIKADLTKQQDITNVLDIIK--   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEE--EEEEESSCCCC----------CTTEEEEECCTTCHHHHHHHHHHTT--
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcE--EEEeccccccc----------cccceEEecCcCCHHHHHHHHHHHH--
Confidence            4679999999999999999999999 6665  88888876521          1246789999999999999996554  


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.|++++++.++|+|+++        ++||++||..+..
T Consensus        68 ~~~id~lv~nAg~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--------g~iv~~sS~~~~~  132 (244)
T 4e4y_A           68 NVSFDGIFLNAGILI-------KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--------ASIVFNGSDQCFI  132 (244)
T ss_dssp             TCCEEEEEECCCCCC-------CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--------EEEEEECCGGGTC
T ss_pred             hCCCCEEEECCccCC-------CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--------cEEEEECCHHHcc
Confidence            679999999999875       4677889999999999999999999999999998764        3999999999888


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|++||+++++|+++|+
T Consensus       133 ~---~~~~~~Y~asKaa~~~~~~~la  155 (244)
T 4e4y_A          133 A---KPNSFAYTLSKGAIAQMTKSLA  155 (244)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             C---CCCCchhHHHHHHHHHHHHHHH
Confidence            7   6888999999999999999994

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.96  E-value=1.9e-29  Score=201.04  Aligned_cols=165  Identities=22%  Similarity=0.271  Sum_probs=136.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC-CCceeEEEecCCCH-HHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVE-STIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~-~~v~~~~~~~  101 (214)
                      |++++|+++||||++|||+++|++|+++|++ .|++.+|++.. +...++.... +.++.++.+|++|+ ++++++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~-~v~~~~r~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLK-NFVILDRVENP-TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCS-EEEEEESSCCH-HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCc-EEEEEecCchH-HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence            4678999999999999999999999999996 48888988742 2222222222 34788999999998 9999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .+.++++|+||||||..               +.+++++.+++|+.+++.+++.++|+|.+++.+   ..++||++||..
T Consensus        79 ~~~~g~id~lv~~Ag~~---------------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~---~~g~iv~isS~~  140 (254)
T 1sby_A           79 FDQLKTVDILINGAGIL---------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGG---PGGIIANICSVT  140 (254)
T ss_dssp             HHHHSCCCEEEECCCCC---------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCGG
T ss_pred             HHhcCCCCEEEECCccC---------------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCC---CCCEEEEECchh
Confidence            99999999999999963               236788899999999999999999999765310   014999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      +..+   .++...|+++|+++++|+++++.
T Consensus       141 ~~~~---~~~~~~Y~~sK~a~~~~~~~la~  167 (254)
T 1sby_A          141 GFNA---IHQVPVYSASKAAVVSFTNSLAK  167 (254)
T ss_dssp             GTSC---CTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             hccC---CCCchHHHHHHHHHHHHHHHHHH
Confidence            8877   57788999999999999999854

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.96  E-value=1.9e-30  Score=230.27  Aligned_cols=171  Identities=22%  Similarity=0.301  Sum_probs=133.4

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec---------CCCCcccccchhhcCCCceeEEEecCC
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR---------NPNGATGLLDLKNRFPERLDVLQLDLT   89 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~   89 (214)
                      ++.+.++++||++|||||++|||+++|++|+++|++  |++.+|         +.+.++.+.+.+...+..   ..+|++
T Consensus        10 ~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~--Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~D~~   84 (613)
T 3oml_A           10 SSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAK--VVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE---AVADYN   84 (613)
T ss_dssp             -----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEC--------------CHHHHHHHHHHTTCC---EEECCC
T ss_pred             CcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcccccccCCHHHHHHHHHHHHHhCCe---EEEEeC
Confidence            345568899999999999999999999999999997  888887         555555555555444443   348999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCC
Q 028056           90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIER  169 (214)
Q Consensus        90 ~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~  169 (214)
                      |.++++++++++.+.++++|+||||||+..       ..++.+.+.++|++.+++|+.|+++++++++|+|++++.|   
T Consensus        85 d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~-------~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g---  154 (613)
T 3oml_A           85 SVIDGAKVIETAIKAFGRVDILVNNAGILR-------DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYG---  154 (613)
T ss_dssp             CGGGHHHHHC----------CEECCCCCCC-------CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCE---
T ss_pred             CHHHHHHHHHHHHHHCCCCcEEEECCCCCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---
Confidence            999999999999999999999999999875       5677889999999999999999999999999999988765   


Q ss_pred             CceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          170 DVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       170 ~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                         +|||+||..+..+   .++...|++||+|+.+|+++|+
T Consensus       155 ---~IV~isS~a~~~~---~~~~~~Y~asKaal~~lt~~la  189 (613)
T 3oml_A          155 ---RIIMTSSNSGIYG---NFGQVNYTAAKMGLIGLANTVA  189 (613)
T ss_dssp             ---EEEEECCHHHHHC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             ---EEEEECCHHHcCC---CCCChHHHHHHHHHHHHHHHHH
Confidence               9999999999888   5788999999999999999994

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.96  E-value=1.8e-29  Score=210.64  Aligned_cols=176  Identities=15%  Similarity=0.062  Sum_probs=140.8

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCCCccc------------ccchhhcCCCceeEEEecCCCH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATG------------LLDLKNRFPERLDVLQLDLTVE   91 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~-~g~~~~vi~~~r~~~~~~~------------~~~~~~~~~~~~~~~~~Dl~~~   91 (214)
                      .-.+|++|||||++|||+++|+.|++ +|++  |++++++.+..+.            ..+.+.+.+.++..+.+|++|+
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~--Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~  121 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGAD--TLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSD  121 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCE--EEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSH
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCE--EEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCH
Confidence            34689999999999999999999999 9997  8888888765432            2334455677899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccccCCCCCC------CCCcc---------------------hhhccHhhhhhheee
Q 028056           92 STIEASAKSIKEKYGSLNLLINASGILSIPNVL------QPETT---------------------LNKVEKSSLMLAYEV  144 (214)
Q Consensus        92 ~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~------~~~~~---------------------~~~~~~~~~~~~~~~  144 (214)
                      ++++++++++.+.+|++|+||||||....++..      ....+                     +.+.+.++|++.+++
T Consensus       122 ~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~V  201 (405)
T 3zu3_A          122 EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAV  201 (405)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHh
Confidence            999999999999999999999999974110000      00122                     367899999999999


Q ss_pred             echhHH-HHHHHHhh-HHhcCCCCCCCCceEEEEeecCcccCCCCCCCCc--chhhhhHHHHHHHHHHh-ccc
Q 028056          145 NAVGPI-LVIKHMSP-LLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW--HSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       145 n~~~~~-~l~~~~~~-~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~--~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+.| ++++++.+ .|.+. .      ++|||+||+.+..+   .+.+  ..|+++|+++++++|+| .||
T Consensus       202 n~~~~~~~~~~~~~~~~m~~~-g------G~IVniSSi~~~~~---~p~~~~~aY~AaKaal~~ltrsLA~El  264 (405)
T 3zu3_A          202 MGGEDWQMWIDALLDAGVLAE-G------AQTTAFTYLGEKIT---HDIYWNGSIGAAKKDLDQKVLAIRESL  264 (405)
T ss_dssp             HSSHHHHHHHHHHHHHTCEEE-E------EEEEEEECCCCGGG---TTTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hchhHHHHHHHHHHHHhhhhC-C------cEEEEEeCchhhCc---CCCccchHHHHHHHHHHHHHHHHHHHh
Confidence            999998 78887765 45442 2      49999999998877   4666  89999999999999999 444

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.96  E-value=5.4e-30  Score=204.34  Aligned_cols=161  Identities=12%  Similarity=0.118  Sum_probs=137.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |++|||||++|||+++|++|+++|++  |++++|++++.+.+.+ +...+.++..+     |+++++++++++.+.++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHT--VACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCE--EEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999997  9999999877665544 33334454443     6778888999999999999


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |+||||||...      ...++.+.+.++|++.+++|+.+++.++++++|+|++++.|      +|||+||..+..+   
T Consensus        74 D~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS~~~~~~---  138 (254)
T 1zmt_A           74 DVLVSNDIFAP------EFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSG------HIIFITSATPFGP---  138 (254)
T ss_dssp             CEEEEECCCCC------CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCSTTTSC---
T ss_pred             CEEEECCCcCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECCcccccC---
Confidence            99999999862      14567888999999999999999999999999999876655      9999999998877   


Q ss_pred             CCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          189 LGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .++...|+++|+++++|++++ .||
T Consensus       139 ~~~~~~Y~~sK~a~~~~~~~la~e~  163 (254)
T 1zmt_A          139 WKELSTYTSARAGACTLANALSKEL  163 (254)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            577899999999999999999 444

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.96  E-value=1.4e-29  Score=200.34  Aligned_cols=161  Identities=22%  Similarity=0.292  Sum_probs=137.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|+++||||++|||++++++|+++|++  |++++|++++++.+.+.+    .++.++++|++|+++++++++    
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGAR--VVAVSRTQADLDSLVREC----PGIEPVCVDLGDWEATERALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHc----CCCCEEEEeCCCHHHHHHHHH----
Confidence            5689999999999999999999999999997  999999876544332222    245677999999999988776    


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeecCcc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVG  182 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~  182 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.+.+.|++++ .+      +||++||..+
T Consensus        73 ~~~~id~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~------~iv~~sS~~~  139 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVAL-------LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG------AIVNVSSQCS  139 (244)
T ss_dssp             TCCCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE------EEEEECCGGG
T ss_pred             HcCCCCEEEECCccCC-------CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCc------EEEEeCchhh
Confidence            5678999999999764       45677888999999999999999999999999998765 33      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|+++++++++++
T Consensus       140 ~~~---~~~~~~Y~~sK~a~~~~~~~la  164 (244)
T 3d3w_A          140 QRA---VTNHSVYCSTKGALDMLTKVMA  164 (244)
T ss_dssp             TSC---CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCCchHHHHHHHHHHHHHHHH
Confidence            776   5778899999999999999984

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.96  E-value=5.1e-30  Score=208.35  Aligned_cols=163  Identities=20%  Similarity=0.277  Sum_probs=138.1

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++++|++|||||++|||+++|++|+++|++  |++.+|+.++.+...+.   .+.++.++++|++|+++++++++++
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~--V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGAT--VIMAVRDTRKGEAAART---MAGQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHTT---SSSEEEEEECCTTCHHHHHHHHHTC
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHH---hcCCeeEEEcCCCCHHHHHHHHHhc
Confidence            346789999999999999999999999999997  99999988765543332   3568999999999999999888876


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                          +++|+||||||...         +..+.+.++|++.+++|+.|++.++++++|+|.+          +||++||..
T Consensus        85 ----~~iD~lv~nAg~~~---------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----------riv~isS~~  141 (291)
T 3rd5_A           85 ----SGADVLINNAGIMA---------VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----------RVVTVSSMA  141 (291)
T ss_dssp             ----CCEEEEEECCCCCS---------CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----------EEEEECCGG
T ss_pred             ----CCCCEEEECCcCCC---------CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------heeEeechh
Confidence                78999999999864         1245678899999999999999999999999875          899999998


Q ss_pred             ccCCC----------CCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGD----------NRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~----------~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+.          .+.++...|++||+++++|++++ .+|
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~  183 (291)
T 3rd5_A          142 HWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRL  183 (291)
T ss_dssp             GTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence            87652          12456789999999999999999 444

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.96  E-value=8.3e-30  Score=199.50  Aligned_cols=146  Identities=25%  Similarity=0.319  Sum_probs=128.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|++|||||++|||+++|++|+++|++  |++.+|+.+                    +|++|+++++++++++  
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~--------------------~D~~~~~~v~~~~~~~--   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTI--VHVASRQTG--------------------LDISDEKSVYHYFETI--   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEE--EEEESGGGT--------------------CCTTCHHHHHHHHHHH--
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEecCCcc--------------------cCCCCHHHHHHHHHHh--
Confidence            4678999999999999999999999999997  999888753                    8999999999988765  


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                        +++|+||||||...      +..++.+.+.++|++.+++|+.+++.++++++|+|++.        ++||++||..+.
T Consensus        58 --g~id~lv~nAg~~~------~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--------g~iv~~sS~~~~  121 (223)
T 3uce_A           58 --GAFDHLIVTAGSYA------PAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG--------GSITLTSGMLSR  121 (223)
T ss_dssp             --CSEEEEEECCCCCC------CCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE--------EEEEEECCGGGT
T ss_pred             --CCCCEEEECCCCCC------CCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC--------eEEEEecchhhc
Confidence              89999999999874      35678889999999999999999999999999999763        399999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+++++|++++ .||
T Consensus       122 ~~---~~~~~~Y~asK~a~~~~~~~la~e~  148 (223)
T 3uce_A          122 KV---VANTYVKAAINAAIEATTKVLAKEL  148 (223)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCchHHHHHHHHHHHHHHHHHHhh
Confidence            87   688899999999999999999 454

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.96  E-value=1.5e-29  Score=217.17  Aligned_cols=170  Identities=23%  Similarity=0.334  Sum_probs=146.2

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ..+...+++|++|||||++|||.++|++|+++|++  |++++|+... +.+.+...+.  ++.+++||++|+++++++++
T Consensus       205 ~~~~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~--Vvl~~r~~~~-~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~  279 (454)
T 3u0b_A          205 ADWDKPLDGKVAVVTGAARGIGATIAEVFARDGAT--VVAIDVDGAA-EDLKRVADKV--GGTALTLDVTADDAVDKITA  279 (454)
T ss_dssp             SCTTSTTTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEECGGGH-HHHHHHHHHH--TCEEEECCTTSTTHHHHHHH
T ss_pred             CccccCCCCCEEEEeCCchHHHHHHHHHHHHCCCE--EEEEeCCccH-HHHHHHHHHc--CCeEEEEecCCHHHHHHHHH
Confidence            34445678999999999999999999999999997  8888886432 2233333322  35689999999999999999


Q ss_pred             HHHHHcCC-ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056          100 SIKEKYGS-LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus       100 ~~~~~~~~-vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      ++.+.+++ +|+||||||+..       ..++.+.+.++|++.+++|+.|++++++.+.+.|.+++.+      +||++|
T Consensus       280 ~~~~~~g~~id~lV~nAGv~~-------~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g------~iV~iS  346 (454)
T 3u0b_A          280 HVTEHHGGKVDILVNNAGITR-------DKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGG------RVIGLS  346 (454)
T ss_dssp             HHHHHSTTCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTC------EEEEEC
T ss_pred             HHHHHcCCCceEEEECCcccC-------CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC------EEEEEe
Confidence            99999876 999999999875       5678899999999999999999999999999998876665      999999


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      |..+..+   .+++..|+++|+++++|+++++
T Consensus       347 S~a~~~g---~~g~~~YaasKaal~~l~~~la  375 (454)
T 3u0b_A          347 SMAGIAG---NRGQTNYATTKAGMIGLAEALA  375 (454)
T ss_dssp             CHHHHHC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             ChHhCCC---CCCCHHHHHHHHHHHHHHHHHH
Confidence            9999888   5888999999999999999994

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.96  E-value=8.1e-30  Score=210.68  Aligned_cols=168  Identities=21%  Similarity=0.262  Sum_probs=138.2

Q ss_pred             cCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecC---------CCCcccccchhhc---CCCceeEEEecCCCH-
Q 028056           27 KGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRN---------PNGATGLLDLKNR---FPERLDVLQLDLTVE-   91 (214)
Q Consensus        27 ~~k~vlItG~s~--giG~~~a~~l~~~g~~~~vi~~~r~---------~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~-   91 (214)
                      ++|++|||||++  |||+++|++|+++|++  |++.+++         .++.+...+....   ....+.+++||+++. 
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~--Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   78 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK--IIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDT   78 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCE--EEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSS
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCE--EEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccc
Confidence            479999999985  9999999999999997  8855544         3433333222222   123477888999888 


Q ss_pred             -H------------------HHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHH
Q 028056           92 -S------------------TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILV  152 (214)
Q Consensus        92 -~------------------~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  152 (214)
                       +                  +++++++++.+.++++|+||||||+...     +..++.+.+.++|++.+++|+.|++++
T Consensus        79 ~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l  153 (329)
T 3lt0_A           79 ANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKE-----VQKDLLNTSRKGYLDALSKSSYSLISL  153 (329)
T ss_dssp             GGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             hhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCccccc-----CCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence             7                  9999999999999999999999997421     256788999999999999999999999


Q ss_pred             HHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCcc-hhhhhHHHHHHHHHHh-ccc
Q 028056          153 IKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWH-SYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       153 ~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~-~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ++.++|+|+++  |      +|||+||..+..+   .+++. .|++||+|+.+|+++| .||
T Consensus       154 ~~~~~p~m~~~--g------~Iv~isS~~~~~~---~~~~~~~Y~asKaal~~~~~~la~el  204 (329)
T 3lt0_A          154 CKYFVNIMKPQ--S------SIISLTYHASQKV---VPGYGGGMSSAKAALESDTRVLAYHL  204 (329)
T ss_dssp             HHHHGGGEEEE--E------EEEEEECGGGTSC---CTTCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhC--C------eEEEEeCccccCC---CCcchHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999875  3      9999999999887   57775 9999999999999999 444

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=1.8e-29  Score=202.56  Aligned_cols=162  Identities=23%  Similarity=0.302  Sum_probs=136.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++|+++||||++|||++++++|+++|++  |++++|+++..+...+.+.+.  +.++.++++|++|+++++++++++.
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV   81 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            368899999999999999999999999997  999999876654433333221  3468899999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|+||||||...               .++|++.+++|+.+++.+++.++++|++++.+   ..++||++||..+
T Consensus        82 ~~~g~id~lv~~Ag~~~---------------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~  143 (267)
T 2gdz_A           82 DHFGRLDILVNNAGVNN---------------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG---EGGIIINMSSLAG  143 (267)
T ss_dssp             HHHSCCCEEEECCCCCC---------------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCGGG
T ss_pred             HHcCCCCEEEECCCCCC---------------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCC---CCCEEEEeCCccc
Confidence            99999999999999642               25678899999999999999999999765310   1149999999998


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      ..+   .++...|+++|++++++++++
T Consensus       144 ~~~---~~~~~~Y~~sK~a~~~~~~~~  167 (267)
T 2gdz_A          144 LMP---VAQQPVYCASKHGIVGFTRSA  167 (267)
T ss_dssp             TSC---CTTCHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCCchHHHHHHHHHHHHHHH
Confidence            877   577889999999999999985

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.96  E-value=2.4e-29  Score=211.63  Aligned_cols=174  Identities=14%  Similarity=0.062  Sum_probs=139.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCCCccc------------ccchhhcCCCceeEEEecCCCHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATG------------LLDLKNRFPERLDVLQLDLTVEST   93 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~-~g~~~~vi~~~r~~~~~~~------------~~~~~~~~~~~~~~~~~Dl~~~~~   93 (214)
                      .+|++|||||++|||+++|+.|++ .|++  |++++|+.+..+.            +.+.+.+.+.++..+++|++|+++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~--Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGAD--TLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCE--EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCE--EEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHH
Confidence            489999999999999999999999 9997  9999998776543            224455567789999999999999


Q ss_pred             HHHHHHHHHHHc-CCccEEEECccccCCC---------CCCCCCc------------------chhhccHhhhhhheeee
Q 028056           94 IEASAKSIKEKY-GSLNLLINASGILSIP---------NVLQPET------------------TLNKVEKSSLMLAYEVN  145 (214)
Q Consensus        94 v~~~~~~~~~~~-~~vd~lv~nag~~~~~---------~~~~~~~------------------~~~~~~~~~~~~~~~~n  145 (214)
                      ++++++++.+.+ |++|+||||||....+         ....+..                  .+.+.+.++|++.+++|
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn  217 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM  217 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence            999999999999 9999999999973100         0000110                  12467899999999999


Q ss_pred             chhHH-HHHHHHhhH-HhcCCCCCCCCceEEEEeecCcccCCCCCCCCc--chhhhhHHHHHHHHHHh-ccc
Q 028056          146 AVGPI-LVIKHMSPL-LKVGGTGIERDVAVVANLSARVGSIGDNRLGGW--HSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       146 ~~~~~-~l~~~~~~~-l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~--~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+.| ++++.+++. |++. .      ++|||+||+.+..+   .+.+  ..|++||+|+.+|+++| .||
T Consensus       218 ~~~~~~~~~~a~~~~~m~~~-g------G~IVniSSi~g~~~---~p~~~~~aY~ASKaAl~~lTrsLA~El  279 (422)
T 3s8m_A          218 GGQDWELWIDALEGAGVLAD-G------ARSVAFSYIGTEIT---WPIYWHGALGKAKVDLDRTAQRLNARL  279 (422)
T ss_dssp             SSHHHHHHHHHHHHTTCEEE-E------EEEEEEEECCCGGG---HHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHhhC-C------CEEEEEeCchhhcc---CCCccchHHHHHHHHHHHHHHHHHHHh
Confidence            99987 788887654 4432 2      49999999998876   4555  89999999999999999 454

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.96  E-value=5.1e-29  Score=197.02  Aligned_cols=161  Identities=22%  Similarity=0.302  Sum_probs=136.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++|++|||||++|||++++++|+++|++  |++++|+++..+...+..    .++.++.+|++|+++++++++    
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAK--VVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----
Confidence            5688999999999999999999999999997  999999876544332221    246677999999999988776    


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeecCcc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVG  182 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~  182 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.+.+.|++++ .+      +||++||..+
T Consensus        73 ~~~~id~vi~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~------~iv~~sS~~~  139 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVI-------MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG------SIVNVSSMVA  139 (244)
T ss_dssp             TCCCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE------EEEEECCGGG
T ss_pred             HcCCCCEEEECCcccC-------CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCe------EEEEEcchhh
Confidence            5678999999999764       45677888999999999999999999999999998765 33      9999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .++...|+++|++++.++++++
T Consensus       140 ~~~---~~~~~~Y~~sK~a~~~~~~~~a  164 (244)
T 1cyd_A          140 HVT---FPNLITYSSTKGAMTMLTKAMA  164 (244)
T ss_dssp             TSC---CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCcchhHHHHHHHHHHHHHHH
Confidence            776   5778899999999999999984

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.96  E-value=1.2e-29  Score=201.27  Aligned_cols=158  Identities=15%  Similarity=0.118  Sum_probs=133.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-e--cCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-C--RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +|++|||||++|||++++++|+++|++  |++. +  |++++++.+.+.+  .+       +|+.|+++++++++++.+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYT--VVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCE--EEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE--EEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHH
Confidence            589999999999999999999999997  8888 6  8876554433322  11       2344778888899999999


Q ss_pred             cCCccEEEECccccCCCCCCCCC---cchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          105 YGSLNLLINASGILSIPNVLQPE---TTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      ++++|+||||||...       .   .++.+.+.++|++.+++|+.+++.++++++|+|++++.|      +|||+||..
T Consensus        70 ~g~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g------~iv~isS~~  136 (244)
T 1zmo_A           70 GEAIDTIVSNDYIPR-------PMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGA------SVIFITSSV  136 (244)
T ss_dssp             SSCEEEEEECCCCCT-------TGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCGG
T ss_pred             cCCCCEEEECCCcCC-------CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEECChh
Confidence            999999999999864       3   567788999999999999999999999999999887654      999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|+++|+++++|++++ .||
T Consensus       137 ~~~~---~~~~~~Y~asK~a~~~~~~~la~e~  165 (244)
T 1zmo_A          137 GKKP---LAYNPLYGPARAATVALVESAAKTL  165 (244)
T ss_dssp             GTSC---CTTCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCC---CCCchHHHHHHHHHHHHHHHHHHHH
Confidence            8877   577889999999999999998 444

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.96  E-value=4.6e-30  Score=203.60  Aligned_cols=161  Identities=23%  Similarity=0.328  Sum_probs=117.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++++|++|||||++|||+++|++|++ |++  |++++|+++.++.+.+     ..++.++.+|+++..+ .+.+.+..+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~--v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~   71 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHI--VYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLK   71 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSE--EEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGT
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCe--EEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHH
Confidence            467899999999999999999999988 776  9999998765444332     2358899999998876 455555566


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ |      +||++||..+.
T Consensus        72 ~~~~id~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g------~iv~isS~~~~  137 (245)
T 3e9n_A           72 NLDHVDTLVHAAAVAR-------DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-G------CVIYINSGAGN  137 (245)
T ss_dssp             TCSCCSEEEECC-----------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEEC-----
T ss_pred             hcCCCCEEEECCCcCC-------CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C------eEEEEcCcccc
Confidence            7789999999999874       46677889999999999999999999999999998754 4      99999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|++||+++++|+++++
T Consensus       138 ~~---~~~~~~Y~asK~a~~~~~~~la  161 (245)
T 3e9n_A          138 GP---HPGNTIYAASKHALRGLADAFR  161 (245)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCchHHHHHHHHHHHHHHHHH
Confidence            87   6788999999999999999994

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.95  E-value=9.5e-29  Score=215.56  Aligned_cols=167  Identities=17%  Similarity=0.194  Sum_probs=143.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCC-------------CCcccccchhhcCCCceeEEEecCCCHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNP-------------NGATGLLDLKNRFPERLDVLQLDLTVES   92 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~-~r~~-------------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   92 (214)
                      ++|++|||||++|||.++|++|+++|++ +|+++ +|+.             +..+++.+.+...+.++.++.||++|++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~-~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAG-HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCC-EEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCC-EEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            5899999999999999999999999998 68888 8984             3334444445555778999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCc
Q 028056           93 TIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDV  171 (214)
Q Consensus        93 ~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~  171 (214)
                      ++.++++++. .++++|+||||||+..       ..++.+.+.+++++.+++|+.|++++++.+.+.+++++ .+     
T Consensus       329 ~v~~~~~~i~-~~g~id~vVh~AGv~~-------~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~-----  395 (525)
T 3qp9_A          329 AAARLLAGVS-DAHPLSAVLHLPPTVD-------SEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPP-----  395 (525)
T ss_dssp             HHHHHHHTSC-TTSCEEEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCC-----
T ss_pred             HHHHHHHHHH-hcCCCcEEEECCcCCC-------CCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCC-----
Confidence            9999999998 7899999999999875       57788999999999999999999999999999987765 44     


Q ss_pred             eEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          172 AVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       172 ~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                       .||++||+.+..+   .+++..|+++|+++++|++.++.
T Consensus       396 -~iV~~SS~a~~~g---~~g~~~YaaaKa~l~~lA~~~~~  431 (525)
T 3qp9_A          396 -VLVLFSSVAAIWG---GAGQGAYAAGTAFLDALAGQHRA  431 (525)
T ss_dssp             -EEEEEEEGGGTTC---CTTCHHHHHHHHHHHHHHTSCCS
T ss_pred             -EEEEECCHHHcCC---CCCCHHHHHHHHHHHHHHHHHHh
Confidence             9999999999998   68899999999999999877654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.95  E-value=1.1e-28  Score=196.24  Aligned_cols=158  Identities=17%  Similarity=0.181  Sum_probs=130.5

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ......+++|++|||||++|||+++|++|+++|++  |++++|+++.   ..+    . .++.++ +|+  .++++++++
T Consensus        11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~---~~~----~-~~~~~~-~D~--~~~~~~~~~   77 (249)
T 1o5i_A           11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAE--VTICARNEEL---LKR----S-GHRYVV-CDL--RKDLDLLFE   77 (249)
T ss_dssp             -----CCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHH---HHH----T-CSEEEE-CCT--TTCHHHHHH
T ss_pred             hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEcCCHHH---HHh----h-CCeEEE-eeH--HHHHHHHHH
Confidence            34457789999999999999999999999999997  9999998622   111    1 256677 999  556676666


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++    .++|+||||||...       ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+      +||++||
T Consensus        78 ~~----~~iD~lv~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g------~iv~isS  140 (249)
T 1o5i_A           78 KV----KEVDILVLNAGGPK-------AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWG------RIVAITS  140 (249)
T ss_dssp             HS----CCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECC
T ss_pred             Hh----cCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc------EEEEEcc
Confidence            55    38999999999764       4667888999999999999999999999999999887654      9999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+..+   .++...|+++|+++++|+++++
T Consensus       141 ~~~~~~---~~~~~~Y~~sK~a~~~~~~~la  168 (249)
T 1o5i_A          141 FSVISP---IENLYTSNSARMALTGFLKTLS  168 (249)
T ss_dssp             GGGTSC---CTTBHHHHHHHHHHHHHHHHHH
T ss_pred             hHhcCC---CCCCchHHHHHHHHHHHHHHHH
Confidence            998877   5778999999999999999984

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.95  E-value=1.1e-28  Score=201.07  Aligned_cols=169  Identities=17%  Similarity=0.261  Sum_probs=132.0

Q ss_pred             cccccCcEEEEecCC--CchhHHHHHHHHhcCCCcEEEEeecC-----------CCCcccccchhhcCC--CceeEEEec
Q 028056           23 SVKWKGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRN-----------PNGATGLLDLKNRFP--ERLDVLQLD   87 (214)
Q Consensus        23 ~~~l~~k~vlItG~s--~giG~~~a~~l~~~g~~~~vi~~~r~-----------~~~~~~~~~~~~~~~--~~~~~~~~D   87 (214)
                      .+++++|++|||||+  +|||+++|++|+++|++  |++.+|+           .++++.+.++ ....  .....+.+|
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   79 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAE--ILVGTWVPALNIFETSLRRGKFDQSRVL-PDGSLMEIKKVYPLD   79 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCE--EEEEEEHHHHHHHHHHHHTTTTTGGGBC-TTSSBCCEEEEEEEC
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCe--EEEeeccccchhhhhhhhhhHhhhhhhh-ccccccccccccccc
Confidence            467899999999999  99999999999999997  8888754           3333333221 1100  012233332


Q ss_pred             ------------CCC--------HHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeech
Q 028056           88 ------------LTV--------ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV  147 (214)
Q Consensus        88 ------------l~~--------~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~  147 (214)
                                  ++|        +++++++++++.+.++++|+||||||....     ...++.+.+.++|++.+++|+.
T Consensus        80 ~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~-----~~~~~~~~~~~~~~~~~~vN~~  154 (297)
T 1d7o_A           80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPE-----VSKPLLETSRKGYLAAISASSY  154 (297)
T ss_dssp             TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHTH
T ss_pred             eeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCcc-----CCCCcccCCHHHHHHHHHHhhh
Confidence                        332        668999999999999999999999996420     1356778899999999999999


Q ss_pred             hHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCc-chhhhhHHHHHHHHHHhc
Q 028056          148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW-HSYRASKAALNQCKILAM  210 (214)
Q Consensus       148 ~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~-~~Y~asKaa~~~~~~~la  210 (214)
                      |+++++++++|+|++.        ++|||+||..+..+   .+++ ..|+++|+|+++|+++++
T Consensus       155 g~~~l~~~~~~~m~~~--------g~iv~isS~~~~~~---~~~~~~~Y~asKaa~~~~~~~la  207 (297)
T 1d7o_A          155 SFVSLLSHFLPIMNPG--------GASISLTYIASERI---IPGYGGGMSSAKAALESDTRVLA  207 (297)
T ss_dssp             HHHHHHHHHGGGEEEE--------EEEEEEECGGGTSC---CTTCTTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccC--------ceEEEEeccccccC---CCCcchHHHHHHHHHHHHHHHHH
Confidence            9999999999999752        39999999988877   4665 689999999999999994

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=1.9e-27  Score=187.57  Aligned_cols=158  Identities=20%  Similarity=0.206  Sum_probs=132.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|++|||||++|||++++++|+++|++  |++++|+++ .+           ++.++++|++|+++++++++++ +.+++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~--V~~~~r~~~-~~-----------~~~~~~~D~~~~~~~~~~~~~~-~~~~~   66 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYR--VVVLDLRRE-GE-----------DLIYVEGDVTREEDVRRAVARA-QEEAP   66 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCE--EEEEESSCC-SS-----------SSEEEECCTTCHHHHHHHHHHH-HHHSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCE--EEEEccCcc-cc-----------ceEEEeCCCCCHHHHHHHHHHH-HhhCC
Confidence            689999999999999999999999997  999999875 21           2478999999999999999999 88899


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhc----cHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKV----EKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +|++|||||...       ..++.+.    +.+++++.+++|+.+++.+++.+.+.|++++.......++||++||..+.
T Consensus        67 ~d~li~~ag~~~-------~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  139 (242)
T 1uay_A           67 LFAVVSAAGVGL-------AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF  139 (242)
T ss_dssp             EEEEEECCCCCC-------CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH
T ss_pred             ceEEEEcccccC-------cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc
Confidence            999999999864       2233333    34589999999999999999999999987541111123599999999887


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .++...|+++|++++.++++++
T Consensus       140 ~~---~~~~~~Y~~sK~a~~~~~~~l~  163 (242)
T 1uay_A          140 EG---QIGQAAYAASKGGVVALTLPAA  163 (242)
T ss_dssp             HC---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCCchhhHHHHHHHHHHHHHH
Confidence            77   5778899999999999999984

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.95  E-value=3.1e-28  Score=195.24  Aligned_cols=168  Identities=21%  Similarity=0.224  Sum_probs=136.7

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHh-cCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~-~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .++|++|||||++|||++++++|++ +|++  |++++|+.+..+...+.+...+.++.++.+|++|.++++++++++.+.
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGD--VVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSE--EEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCe--EEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999999 8997  999999876665554555444668899999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       .........+++++.+++|+.+++.+++.+.+.|++.        ++||++||..+..
T Consensus        80 ~g~id~li~~Ag~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------g~iv~~sS~~~~~  144 (276)
T 1wma_A           80 YGGLDVLVNNAGIAF-------KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--------GRVVNVSSIMSVR  144 (276)
T ss_dssp             HSSEEEEEECCCCCC-------CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEECCHHHHH
T ss_pred             cCCCCEEEECCcccc-------cCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC--------CEEEEECChhhhc
Confidence            999999999999764       1111122257899999999999999999999998652        3999999987653


Q ss_pred             CCC--------------------------------------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDN--------------------------------------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~--------------------------------------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..                                      +..+...|+++|++++.|++.++
T Consensus       145 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la  208 (276)
T 1wma_A          145 ALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHA  208 (276)
T ss_dssp             HHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHH
T ss_pred             ccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHH
Confidence            200                                      00123799999999999999984

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.95  E-value=7.1e-28  Score=197.82  Aligned_cols=170  Identities=20%  Similarity=0.266  Sum_probs=133.2

Q ss_pred             cccccCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecCC-----------CCcccccchhhcCCC---ceeEEEe
Q 028056           23 SVKWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNP-----------NGATGLLDLKNRFPE---RLDVLQL   86 (214)
Q Consensus        23 ~~~l~~k~vlItG~--s~giG~~~a~~l~~~g~~~~vi~~~r~~-----------~~~~~~~~~~~~~~~---~~~~~~~   86 (214)
                      .+++++|++|||||  ++|||+++|++|+++|++  |++.+|++           +.++...++ .. +.   .+.++.+
T Consensus         4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~   79 (315)
T 2o2s_A            4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGAR--VALGTWPPVLGLFQKSLQSGRLDEDRKL-PD-GSLIEFAGVYPL   79 (315)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCE--EEEEECHHHHHHHHHHHHHTTTHHHHBC-TT-SCBCCCSCEEEC
T ss_pred             cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCE--EEEEecccccchhhhhhhhhhhhhhhhh-hc-cccccccccccc
Confidence            46689999999999  899999999999999997  88887653           222222111 11 11   1234433


Q ss_pred             ------------cCCC--------HHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeec
Q 028056           87 ------------DLTV--------ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA  146 (214)
Q Consensus        87 ------------Dl~~--------~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~  146 (214)
                                  |++|        +++++++++++.+.++++|+||||||....     ...++.+.+.++|++.+++|+
T Consensus        80 d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~-----~~~~~~~~~~~~~~~~~~~N~  154 (315)
T 2o2s_A           80 DAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPE-----VTKPLLETSRKGYLAASSNSA  154 (315)
T ss_dssp             CTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHT
T ss_pred             cccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCc-----CCCCcccCCHHHHHHHHhhhh
Confidence                        4443        668999999999999999999999997520     135677889999999999999


Q ss_pred             hhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCc-chhhhhHHHHHHHHHHh-ccc
Q 028056          147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW-HSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       147 ~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~-~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .|++.+++.++|+|++.        ++|||+||..+..+   .+++ ..|+++|+|+++|+++| .||
T Consensus       155 ~g~~~l~~~~~~~m~~~--------g~Iv~isS~~~~~~---~~~~~~~Y~asKaal~~l~~~la~el  211 (315)
T 2o2s_A          155 YSFVSLLQHFGPIMNEG--------GSAVTLSYLAAERV---VPGYGGGMSSAKAALESDTRTLAWEA  211 (315)
T ss_dssp             HHHHHHHHHHSTTEEEE--------EEEEEEEEGGGTSC---CTTCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcC--------CEEEEEeccccccc---CCCccHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999753        39999999998877   4565 58999999999999999 443

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.95  E-value=1.6e-27  Score=201.65  Aligned_cols=176  Identities=12%  Similarity=0.050  Sum_probs=139.6

Q ss_pred             ccCcEEEEecCCCchhHH--HHHHHHhcCCCcEEEEeecCCCCcc------------cccchhhcCCCceeEEEecCCCH
Q 028056           26 WKGGVSLVQGASRGIGLE--FAKQLLEKNDKGCVIATCRNPNGAT------------GLLDLKNRFPERLDVLQLDLTVE   91 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~--~a~~l~~~g~~~~vi~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~Dl~~~   91 (214)
                      ..+|++|||||++|||++  +++.|+++|++  |++++|+....+            .+.+...+.+.++..++||++|+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~--Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAH--TIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCE--EEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCE--EEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCH
Confidence            678999999999999999  99999999997  999998776532            23444555677899999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccccCCCC---------CCCCCc------------------chhhccHhhhhhheee
Q 028056           92 STIEASAKSIKEKYGSLNLLINASGILSIPN---------VLQPET------------------TLNKVEKSSLMLAYEV  144 (214)
Q Consensus        92 ~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~---------~~~~~~------------------~~~~~~~~~~~~~~~~  144 (214)
                      ++++++++++.+.++++|+||||||....++         ...|..                  .+.+.+.++|++.+++
T Consensus       136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v  215 (418)
T 4eue_A          136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV  215 (418)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence            9999999999999999999999999741000         000110                  1246789999999999


Q ss_pred             echhHH-HHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCc--chhhhhHHHHHHHHHHh-ccc
Q 028056          145 NAVGPI-LVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW--HSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       145 n~~~~~-~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~--~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      |..+.+ .+++.+.+.+...+.      ++||++||+.+..+   .+.+  ..|+++|+|+++|+++| .||
T Consensus       216 n~~~~~~~~~~~l~~~~~~~~g------g~IV~iSSi~~~~~---~p~~~~~aY~ASKaAL~~ltrsLA~EL  278 (418)
T 4eue_A          216 MGGEDWQEWCEELLYEDCFSDK------ATTIAYSYIGSPRT---YKIYREGTIGIAKKDLEDKAKLINEKL  278 (418)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEEE------EEEEEEECCCCGGG---TTTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhhcCC------cEEEEEeCchhcCC---CCccccHHHHHHHHHHHHHHHHHHHHh
Confidence            999988 777777665433333      49999999988877   4666  99999999999999999 443

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.95  E-value=4.5e-28  Score=199.33  Aligned_cols=170  Identities=19%  Similarity=0.257  Sum_probs=115.2

Q ss_pred             cccccCcEEEEecC--CCchhHHHHHHHHhcCCCcEEEEeecCC-----------CCccc-----------ccchhhcCC
Q 028056           23 SVKWKGGVSLVQGA--SRGIGLEFAKQLLEKNDKGCVIATCRNP-----------NGATG-----------LLDLKNRFP   78 (214)
Q Consensus        23 ~~~l~~k~vlItG~--s~giG~~~a~~l~~~g~~~~vi~~~r~~-----------~~~~~-----------~~~~~~~~~   78 (214)
                      .+++++|++|||||  ++|||+++|++|+++|++  |++++|++           +.++.           +.+.+.+.+
T Consensus         4 ~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (319)
T 2ptg_A            4 PVDLRGKTAFVAGVADSNGYGWAICKLLRAAGAR--VLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKP   81 (319)
T ss_dssp             CCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCE--EEEEECHHHHHHHHC-----------------------------
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCE--EEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcc
Confidence            46689999999999  899999999999999997  88887642           22211           111111111


Q ss_pred             C---ceeEEEe------------cCCC--------HHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccH
Q 028056           79 E---RLDVLQL------------DLTV--------ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEK  135 (214)
Q Consensus        79 ~---~~~~~~~------------Dl~~--------~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~  135 (214)
                      .   ...++.+            |++|        +++++++++++.+.++++|+||||||....     ...++.+.+.
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~-----~~~~~~~~~~  156 (319)
T 2ptg_A           82 VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPE-----VTKPLLQTSR  156 (319)
T ss_dssp             ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSS-----SSSCGGGCCH
T ss_pred             ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCC-----CCCccccCCH
Confidence            1   1233333            3343        458999999999999999999999997520     1356788999


Q ss_pred             hhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCc-chhhhhHHHHHHHHHHhc
Q 028056          136 SSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGW-HSYRASKAALNQCKILAM  210 (214)
Q Consensus       136 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~-~~Y~asKaa~~~~~~~la  210 (214)
                      ++|++.+++|+.|+++++++++|+|++.        ++|||+||..+..+   .+++ ..|+++|+|+++|+++|+
T Consensus       157 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~--------g~Iv~isS~~~~~~---~~~~~~~Y~asKaal~~l~~~la  221 (319)
T 2ptg_A          157 KGYLAAVSSSSYSFVSLLQHFLPLMKEG--------GSALALSYIASEKV---IPGYGGGMSSAKAALESDCRTLA  221 (319)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEEECC---------------------THHHHHHHH
T ss_pred             HHHHHHHhHhhHHHHHHHHHHHHHHhcC--------ceEEEEeccccccc---cCccchhhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999753        39999999988776   4665 689999999999999994

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.94  E-value=2.9e-27  Score=204.48  Aligned_cols=164  Identities=18%  Similarity=0.229  Sum_probs=141.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC---cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +|++|||||++|||.++|++|+++|++ +|++++|+...   .+++.+.+...+.++.++.||++|++++.++++++.+.
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAA-HLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCc-EEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            589999999999999999999999996 69999997433   33444555666789999999999999999999998777


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                       +++|+||||||+..      ...++.+.+.++|++.+++|+.|++++.+.+.+..    .+      +||++||+.+..
T Consensus       318 -g~ld~vVh~AGv~~------~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~----~~------~iV~~SS~a~~~  380 (496)
T 3mje_A          318 -APLTAVFHSAGVAH------DDAPVADLTLGQLDALMRAKLTAARHLHELTADLD----LD------AFVLFSSGAAVW  380 (496)
T ss_dssp             -SCEEEEEECCCCCC------SCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC----CS------EEEEEEEHHHHT
T ss_pred             -CCCeEEEECCcccC------CCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC----CC------EEEEEeChHhcC
Confidence             78999999999873      25678899999999999999999999999876552    23      999999999998


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAMDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la~~  212 (214)
                      +   .+++..|+++|+++++|++.++..
T Consensus       381 g---~~g~~~YaAaKa~ldala~~~~~~  405 (496)
T 3mje_A          381 G---SGGQPGYAAANAYLDALAEHRRSL  405 (496)
T ss_dssp             T---CTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred             C---CCCcHHHHHHHHHHHHHHHHHHhc
Confidence            8   588999999999999999987654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=2.2e-26  Score=209.13  Aligned_cols=162  Identities=20%  Similarity=0.319  Sum_probs=142.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHH-hcCCCcEEEEeecCCC---CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLL-EKNDKGCVIATCRNPN---GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~-~~g~~~~vi~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+|+++||||++|||+++|++|+ ++|++ +|++++|+..   ..+++.+.+...+.++.+++||++|+++++++++++.
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~-~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVR-NLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCC-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCc-EEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            58999999999999999999999 79997 7999999843   3444445555667899999999999999999999998


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.+ ++|+||||||+..       ..++.+.+.++|++.+++|+.|++++++++.+.|            +|||+||+.+
T Consensus       608 ~~~-~id~lVnnAGv~~-------~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------------~iV~~SS~ag  667 (795)
T 3slk_A          608 DEH-PLTAVVHAAGVLD-------DGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------------ALVLFSSVSG  667 (795)
T ss_dssp             TTS-CEEEEEECCCCCC-------CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------------EEEEEEETHH
T ss_pred             HhC-CCEEEEECCCcCC-------CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------------EEEEEccHHh
Confidence            776 9999999999985       6788999999999999999999999999986654            7999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAMDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~~  212 (214)
                      ..+   .+++..|+++|+.+++|.+.++..
T Consensus       668 ~~g---~~g~~~YaAaka~~~alA~~~~~~  694 (795)
T 3slk_A          668 VLG---SGGQGNYAAANSFLDALAQQRQSR  694 (795)
T ss_dssp             HHT---CSSCHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCC---CCCCHHHHHHHHHHHHHHHHHHHc
Confidence            998   689999999999999998887654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.93  E-value=1.7e-26  Score=214.97  Aligned_cols=171  Identities=22%  Similarity=0.277  Sum_probs=142.1

Q ss_pred             cccccccCcEEEEecCCCc-hhHHHHHHHHhcCCCcEEEEe-ecCCCCcccccchh-hc---CCCceeEEEecCCCHHHH
Q 028056           21 SASVKWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLK-NR---FPERLDVLQLDLTVESTI   94 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~g-iG~~~a~~l~~~g~~~~vi~~-~r~~~~~~~~~~~~-~~---~~~~~~~~~~Dl~~~~~v   94 (214)
                      ...+++++|++|||||++| ||+++|++|+++|++  |+++ +|+.+.++...+.+ .+   .+.++.+++||++|.+++
T Consensus       469 ~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~--VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esV  546 (1688)
T 2pff_A          469 XXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAK--VVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDV  546 (1688)
T ss_dssp             SSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCE--EEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHH
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHHCcCE--EEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHH
Confidence            3446789999999999998 999999999999997  7766 67776665543333 22   255789999999999999


Q ss_pred             HHHHHHHHHH-----cC-CccEEEECccccCCCCCCCCCc-chhhcc--HhhhhhheeeechhHHHHHHHH--hhHHhcC
Q 028056           95 EASAKSIKEK-----YG-SLNLLINASGILSIPNVLQPET-TLNKVE--KSSLMLAYEVNAVGPILVIKHM--SPLLKVG  163 (214)
Q Consensus        95 ~~~~~~~~~~-----~~-~vd~lv~nag~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~  163 (214)
                      +++++++.+.     ++ ++|+||||||+..       .. ++.+.+  .++|++.+++|+.+++.+++.+  .+.|+++
T Consensus       547 eaLVe~I~e~~~~~GfG~~IDILVNNAGI~~-------~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr  619 (1688)
T 2pff_A          547 EALIEFIYDTEKNGGLGWDLDAIIPFAAIPE-------QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR  619 (1688)
T ss_dssp             HHHHHHHHSCTTSSSCCCCCCEEECCCCCCC-------CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS
T ss_pred             HHHHHHHHHhccccccCCCCeEEEECCCcCC-------CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC
Confidence            9999999988     77 9999999999864       34 566777  8999999999999999999998  7888776


Q ss_pred             CCCCCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHH-HHHhcc
Q 028056          164 GTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQC-KILAMD  211 (214)
Q Consensus       164 ~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~-~~~la~  211 (214)
                      +.|      +|||+||..+..+     +...|++||+|+++| ++.+++
T Consensus       620 ggG------rIVnISSiAG~~G-----g~saYaASKAAL~aLttrsLAe  657 (1688)
T 2pff_A          620 PAQ------VILPMSPNHGTFG-----GDGMYSESKLSLETLFNRWHSE  657 (1688)
T ss_dssp             CEE------ECCCCCSCTTTSS-----CBTTHHHHHHHHTHHHHHTTTS
T ss_pred             CCC------EEEEEEChHhccC-----CchHHHHHHHHHHHHHHHHHHH
Confidence            544      9999999988765     457899999999999 777754

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.93  E-value=1.2e-25  Score=172.83  Aligned_cols=139  Identities=17%  Similarity=0.148  Sum_probs=123.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++||||+|+||++++++|+ +|++  |++.+|+++                 .+.+|++|+++++++++++    +++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~--V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~~d   60 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAE--VITAGRHSG-----------------DVTVDITNIDSIKKMYEQV----GKVD   60 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSE--EEEEESSSS-----------------SEECCTTCHHHHHHHHHHH----CCEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCe--EEEEecCcc-----------------ceeeecCCHHHHHHHHHHh----CCCC
Confidence            79999999999999999999 9987  999998763                 4789999999999988765    7899


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCC
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL  189 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~  189 (214)
                      +||||||...       ..++.+.+.++|++.+++|+.+++.+++.+.+.|++.        ++||++||..+..+   .
T Consensus        61 ~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------~~iv~~sS~~~~~~---~  122 (202)
T 3d7l_A           61 AIVSATGSAT-------FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--------GSFTLTTGIMMEDP---I  122 (202)
T ss_dssp             EEEECCCCCC-------CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--------EEEEEECCGGGTSC---C
T ss_pred             EEEECCCCCC-------CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--------CEEEEEcchhhcCC---C
Confidence            9999999764       4567788899999999999999999999999998652        39999999888776   5


Q ss_pred             CCcchhhhhHHHHHHHHHHhc
Q 028056          190 GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       190 ~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ++...|+++|++++.++++++
T Consensus       123 ~~~~~Y~~sK~~~~~~~~~~~  143 (202)
T 3d7l_A          123 VQGASAAMANGAVTAFAKSAA  143 (202)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHT
T ss_pred             CccHHHHHHHHHHHHHHHHHH
Confidence            778899999999999999995

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.93  E-value=6.3e-26  Score=216.51  Aligned_cols=170  Identities=22%  Similarity=0.272  Sum_probs=141.5

Q ss_pred             ccccccCcEEEEecCCCc-hhHHHHHHHHhcCCCcEEEEe-ecCCCCcccccchh----hcCCCceeEEEecCCCHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLK----NRFPERLDVLQLDLTVESTIE   95 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~g-iG~~~a~~l~~~g~~~~vi~~-~r~~~~~~~~~~~~----~~~~~~~~~~~~Dl~~~~~v~   95 (214)
                      ..++++||++|||||++| ||+++|++|+++|++  |+++ .|+.+.++...+.+    ...+.++.++.||++|.++++
T Consensus       669 ~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~--Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~  746 (1887)
T 2uv8_A          669 NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAK--VVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVE  746 (1887)
T ss_dssp             TCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCE--EEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHH
T ss_pred             ccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCE--EEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHH
Confidence            345789999999999998 999999999999997  7777 57665554432222    223567899999999999999


Q ss_pred             HHHHHHHHH-----cC-CccEEEECccccCCCCCCCCCc-chhhcc--HhhhhhheeeechhHHHHHHHH--hhHHhcCC
Q 028056           96 ASAKSIKEK-----YG-SLNLLINASGILSIPNVLQPET-TLNKVE--KSSLMLAYEVNAVGPILVIKHM--SPLLKVGG  164 (214)
Q Consensus        96 ~~~~~~~~~-----~~-~vd~lv~nag~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~  164 (214)
                      ++++++.+.     +| ++|+||||||+..       .. ++.+.+  .++|++.+++|+.+++.+++.+  .|.|++++
T Consensus       747 alv~~i~~~~~~~G~G~~LDiLVNNAGi~~-------~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~  819 (1887)
T 2uv8_A          747 ALIEFIYDTEKNGGLGWDLDAIIPFAAIPE-------QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP  819 (1887)
T ss_dssp             HHHHHHHSCTTTTSCCCCCSEEEECCCCCC-------CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC
T ss_pred             HHHHHHHHhccccccCCCCeEEEECCCcCC-------CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC
Confidence            999999988     66 9999999999864       34 677777  8999999999999999999988  78887665


Q ss_pred             CCCCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHH-HHHhcc
Q 028056          165 TGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQC-KILAMD  211 (214)
Q Consensus       165 ~~~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~-~~~la~  211 (214)
                      .|      +|||+||..+..+     +...|++||+|+++| ++++++
T Consensus       820 ~G------~IVnISS~ag~~g-----g~~aYaASKAAL~~Lttr~lA~  856 (1887)
T 2uv8_A          820 AQ------VILPMSPNHGTFG-----GDGMYSESKLSLETLFNRWHSE  856 (1887)
T ss_dssp             EE------EEEEECSCTTCSS-----CBTTHHHHHHHGGGHHHHHHHS
T ss_pred             CC------EEEEEcChHhccC-----CCchHHHHHHHHHHHHHHHHHH
Confidence            44      9999999988765     457899999999999 888854

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.92  E-value=7.1e-26  Score=180.32  Aligned_cols=144  Identities=19%  Similarity=0.195  Sum_probs=119.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |++|||||++|||+++|++|+++|++  |++++|++++.+.            . +++|++|+++++++++++   .+++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~--V~~~~r~~~~~~~------------~-~~~Dl~~~~~v~~~~~~~---~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQ--IVGIDIRDAEVIA------------D-LSTAEGRKQAIADVLAKC---SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSSSSEEC------------C-TTSHHHHHHHHHHHHTTC---TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCchhhcc------------c-cccCCCCHHHHHHHHHHh---CCCC
Confidence            68999999999999999999999997  9999998765331            1 568999999998887743   3799


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC--
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~--  186 (214)
                      |+||||||...      +.        +.|++.+++|+.+++.++++++|+|++++.+      +||++||..+....  
T Consensus        64 d~lv~~Ag~~~------~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g------~iv~isS~~~~~~~~~  123 (257)
T 1fjh_A           64 DGLVLCAGLGP------QT--------KVLGNVVSVNYFGATELMDAFLPALKKGHQP------AAVVISSVASAHLAFD  123 (257)
T ss_dssp             SEEEECCCCCT------TC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECCGGGGSSCGG
T ss_pred             CEEEECCCCCC------Cc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCc------EEEEECChhhhccccc
Confidence            99999999753      01        2378899999999999999999999887655      99999999887310  


Q ss_pred             -----------------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 -----------------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 -----------------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                                             .+.++...|++||++++.++++++
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la  170 (257)
T 1fjh_A          124 KNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRA  170 (257)
T ss_dssp             GCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTH
T ss_pred             cchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHH
Confidence                                   124567899999999999999984

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.92  E-value=3.9e-25  Score=191.26  Aligned_cols=163  Identities=17%  Similarity=0.196  Sum_probs=139.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc---ccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA---TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|||||+||||.+++++|+++|++ +|++++|+....   +++.+.+...+.++.++.||++|.+++.++++++ +
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCC-EEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence            5799999999999999999999999996 699999987532   2333444555778999999999999999999998 5


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+||||||...       ...+.+.+.+++++.+++|+.|++++.+.+.+    .+.+      +||++||..+.
T Consensus       303 ~~g~ld~VIh~AG~~~-------~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~------~~V~~SS~a~~  365 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLD-------DGTVDTLTGERIERASRAKVLGARNLHELTRE----LDLT------AFVLFSSFASA  365 (486)
T ss_dssp             TTSCEEEEEECCCCCC-------CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCS------EEEEEEEHHHH
T ss_pred             hcCCCcEEEECCccCC-------CCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCC------EEEEEcChHhc
Confidence            5689999999999875       56778899999999999999999999998754    2333      99999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      .+   .++...|+++|+++++|.+.++.
T Consensus       366 ~g---~~g~~~Yaaaka~l~~la~~~~~  390 (486)
T 2fr1_A          366 FG---APGLGGYAPGNAYLDGLAQQRRS  390 (486)
T ss_dssp             TC---CTTCTTTHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCCHHHHHHHHHHHHHHHHHHh
Confidence            88   57889999999999999987754

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.92  E-value=2e-25  Score=212.74  Aligned_cols=168  Identities=22%  Similarity=0.248  Sum_probs=138.8

Q ss_pred             ccccccCcEEEEecCCCc-hhHHHHHHHHhcCCCcEEEEee-cCCCCccccc-ch---hhcCCCceeEEEecCCCHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIATC-RNPNGATGLL-DL---KNRFPERLDVLQLDLTVESTIE   95 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~g-iG~~~a~~l~~~g~~~~vi~~~-r~~~~~~~~~-~~---~~~~~~~~~~~~~Dl~~~~~v~   95 (214)
                      ..++++||++|||||++| ||.++|++|+++|++  |++++ |+.+.++... ++   +...+.++.++.||++|.++++
T Consensus       646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~--VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~  723 (1878)
T 2uv9_A          646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAK--VIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVE  723 (1878)
T ss_dssp             HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCE--EEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHH
T ss_pred             cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCE--EEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHH
Confidence            346789999999999999 999999999999997  77774 6555443322 22   2223567899999999999999


Q ss_pred             HHHHHHHHH---cC-CccEEEECccccCCCCCCCCCc-chhhcc--HhhhhhheeeechhHHHHHHH--HhhHHhcCCCC
Q 028056           96 ASAKSIKEK---YG-SLNLLINASGILSIPNVLQPET-TLNKVE--KSSLMLAYEVNAVGPILVIKH--MSPLLKVGGTG  166 (214)
Q Consensus        96 ~~~~~~~~~---~~-~vd~lv~nag~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~l~~~~~~  166 (214)
                      ++++++.+.   ++ ++|+||||||+..       .. ++.+.+  .++|++.+++|+.+++.+++.  .++.|.+++.|
T Consensus       724 alv~~i~~~~~~~G~~IDiLVnNAGi~~-------~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G  796 (1878)
T 2uv9_A          724 ALVNYIYDTKNGLGWDLDYVVPFAAIPE-------NGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQ  796 (1878)
T ss_dssp             HHHHHHHCSSSSCCCCCSEEEECCCCCC-------TTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEE
T ss_pred             HHHHHHHHhhcccCCCCcEEEeCccccc-------CCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCC
Confidence            999999988   88 9999999999864       34 677777  899999999999999999987  67777766544


Q ss_pred             CCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh
Q 028056          167 IERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       167 ~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                            +|||+||..+..+     +...|+++|+++++|++.+
T Consensus       797 ------~IVnISS~ag~~g-----g~~aYaASKAAL~aLt~~l  828 (1878)
T 2uv9_A          797 ------VILPLSPNHGTFG-----NDGLYSESKLALETLFNRW  828 (1878)
T ss_dssp             ------ECCEECSCSSSSS-----CCSSHHHHHHHHTTHHHHH
T ss_pred             ------EEEEEcchhhccC-----CchHHHHHHHHHHHHHHHH
Confidence                  9999999988776     3568999999999998765

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.92  E-value=6.8e-26  Score=174.68  Aligned_cols=149  Identities=22%  Similarity=0.281  Sum_probs=122.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |+++||||+||||++++++|+++  +  |++++|+++..+.+.+.+.   .  .++.+|++|++++++++++    ++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~--V~~~~r~~~~~~~~~~~~~---~--~~~~~D~~~~~~~~~~~~~----~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--D--LLLSGRRAGALAELAREVG---A--RALPADLADELEAKALLEE----AGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--E--EEEECSCHHHHHHHHHHHT---C--EECCCCTTSHHHHHHHHHH----HCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--C--EEEEECCHHHHHHHHHhcc---C--cEEEeeCCCHHHHHHHHHh----cCCC
Confidence            58999999999999999999998  5  9999998765544333332   2  7889999999999998887    6899


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |+||||||...       ..++.+.+.+++++.+++|+.+++.+++.+    ++++.      ++||++||..+..+   
T Consensus        68 d~vi~~ag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~------~~iv~~sS~~~~~~---  127 (207)
T 2yut_A           68 DLLVHAVGKAG-------RASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKG------ARAVFFGAYPRYVQ---  127 (207)
T ss_dssp             EEEEECCCCCC-------CBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEE------EEEEEECCCHHHHS---
T ss_pred             CEEEECCCcCC-------CCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCC------cEEEEEcChhhccC---
Confidence            99999999764       456677888999999999999999999988    22232      49999999988776   


Q ss_pred             CCCcchhhhhHHHHHHHHHHhc
Q 028056          189 LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .++...|+++|++++.++++++
T Consensus       128 ~~~~~~Y~~sK~a~~~~~~~~~  149 (207)
T 2yut_A          128 VPGFAAYAAAKGALEAYLEAAR  149 (207)
T ss_dssp             STTBHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHH
Confidence            5778899999999999999983

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.92  E-value=3e-24  Score=186.53  Aligned_cols=161  Identities=19%  Similarity=0.249  Sum_probs=135.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC---cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .+|++|||||+||||.+++++|+++|++ +|++++|+...   .+++.+.+...+.++.++.||++|.+++.+++++   
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAE-RLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCc-EEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc---
Confidence            4799999999999999999999999996 69999998643   2333344455567899999999999999988876   


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                        +++|+||||||...       ...+.+.+.+++++.+++|+.|++++.+.+.+. .  +.      ++||++||..+.
T Consensus       334 --~~ld~VVh~AGv~~-------~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~--~~------~~~V~~SS~a~~  395 (511)
T 2z5l_A          334 --YPPNAVFHTAGILD-------DAVIDTLSPESFETVRGAKVCGAELLHQLTADI-K--GL------DAFVLFSSVTGT  395 (511)
T ss_dssp             --SCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-T--TC------CCEEEEEEGGGT
T ss_pred             --CCCcEEEECCcccC-------CcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-c--CC------CEEEEEeCHHhc
Confidence              68999999999875       567788999999999999999999999876532 1  22      399999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAMDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la~~  212 (214)
                      .+   .+++..|+++|++++.|++.++..
T Consensus       396 ~g---~~g~~~YaaaKa~ld~la~~~~~~  421 (511)
T 2z5l_A          396 WG---NAGQGAYAAANAALDALAERRRAA  421 (511)
T ss_dssp             TC---CTTBHHHHHHHHHHHHHHHHHHTT
T ss_pred             CC---CCCCHHHHHHHHHHHHHHHHHHHc
Confidence            88   578899999999999999987543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.91  E-value=1.4e-24  Score=215.13  Aligned_cols=163  Identities=12%  Similarity=0.058  Sum_probs=128.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc---ccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG---LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .+|++|||||++|||+++|++|+++|++ +|++.+|+..+.+.   ..+.+...+.++.++.||++|.++++++++++.+
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~-~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQ-KLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCC-EEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCC-EEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence            6899999999999999999999999997 68899998776542   2233334567899999999999999999999874


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                       ++++|+||||||+..       ..++.+.+.++|++.+++|+.|++++++.+.+.|.+.  |      +|||+||+.+.
T Consensus      1962 -~g~id~lVnnAgv~~-------~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g------~iV~iSS~ag~ 2025 (2512)
T 2vz8_A         1962 -LGPVGGVFNLAMVLR-------DAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--D------YFVIFSSVSCG 2025 (2512)
T ss_dssp             -HSCEEEEEECCCC-----------------------CTTTTHHHHHHHHHHHHHHCTTC--C------EEEEECCHHHH
T ss_pred             -cCCCcEEEECCCcCC-------CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--C------EEEEecchhhc
Confidence             789999999999874       5678899999999999999999999999999887654  3      99999999999


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      .+   .+++..|+++|+++++|++.+
T Consensus      2026 ~g---~~g~~~Y~aaKaal~~l~~~r 2048 (2512)
T 2vz8_A         2026 RG---NAGQANYGFANSAMERICEKR 2048 (2512)
T ss_dssp             TT---CTTCHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCcHHHHHHHHHHHHHHHHH
Confidence            88   588899999999999999943

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.90  E-value=1.8e-23  Score=167.68  Aligned_cols=141  Identities=14%  Similarity=0.059  Sum_probs=116.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++|++|||||+|+||++++++|+++|++  |++.+|++.+.+         +.++.++.+|++|++++.++++       
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~--V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEI--LRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA-------   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEE--EEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCE--EEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc-------
Confidence            4689999999999999999999999987  999999876533         4578899999999999988877       


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|+||||||...               .+.|++.+++|+.|++.+++++.+    .+.+      +||++||..++...
T Consensus        64 ~~D~vi~~Ag~~~---------------~~~~~~~~~~N~~g~~~l~~a~~~----~~~~------~iv~~SS~~~~g~~  118 (267)
T 3rft_A           64 GCDGIVHLGGISV---------------EKPFEQILQGNIIGLYNLYEAARA----HGQP------RIVFASSNHTIGYY  118 (267)
T ss_dssp             TCSEEEECCSCCS---------------CCCHHHHHHHHTHHHHHHHHHHHH----TTCC------EEEEEEEGGGGTTS
T ss_pred             CCCEEEECCCCcC---------------cCCHHHHHHHHHHHHHHHHHHHHH----cCCC------EEEEEcchHHhCCC
Confidence            6899999999642               245678899999999999999843    3333      99999998776321


Q ss_pred             ---------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 ---------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ---------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                               .+..+...|+.+|++++.+++.++
T Consensus       119 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a  151 (267)
T 3rft_A          119 PQTERLGPDVPARPDGLYGVSKCFGENLARMYF  151 (267)
T ss_dssp             BTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence                     234566899999999999999884

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.89  E-value=1.9e-23  Score=165.58  Aligned_cols=144  Identities=18%  Similarity=0.165  Sum_probs=118.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |++|||||+|+||++++++|+++|++  |++++|+++..+.             .+.+|++|.++++++++++   .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHT--VIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCE--EEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCc
Confidence            68999999999999999999999997  9999998765331             1568999999998888755   3689


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |+||||||...      +        .+.+++.+++|+.+++.+++++.+.|++.+.+      +||++||..+..+...
T Consensus        64 d~vi~~Ag~~~------~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~------~iv~~sS~~~~~~~~~  123 (255)
T 2dkn_A           64 DGLVCCAGVGV------T--------AANSGLVVAVNYFGVSALLDGLAEALSRGQQP------AAVIVGSIAATQPGAA  123 (255)
T ss_dssp             SEEEECCCCCT------T--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECCGGGGSTTGG
T ss_pred             cEEEECCCCCC------c--------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCc------eEEEEecccccccccc
Confidence            99999999653      0        13477889999999999999999999877654      9999999887765200


Q ss_pred             -----------------------CCCcchhhhhHHHHHHHHHHhc
Q 028056          189 -----------------------LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       189 -----------------------~~~~~~Y~asKaa~~~~~~~la  210 (214)
                                             .++...|+++|++++.+++.++
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~  168 (255)
T 2dkn_A          124 ELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNV  168 (255)
T ss_dssp             GCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTH
T ss_pred             ccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHH
Confidence                                   1466799999999999999984

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.89  E-value=2.1e-23  Score=207.16  Aligned_cols=177  Identities=20%  Similarity=0.181  Sum_probs=134.4

Q ss_pred             ccccCcEEEEecCCCc-hhHHHHHHHHhcCCCcEEEEeecCCCC-----cccccchhhcCCCceeEEEecCCCHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIATCRNPNG-----ATGLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        24 ~~l~~k~vlItG~s~g-iG~~~a~~l~~~g~~~~vi~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      ..++||++|||||++| ||+++|+.|+++|++  |++++|+.+.     ++++.+.+...+.++..++||++|+++++++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~--Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~l 2209 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGAT--VIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKL 2209 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCE--EEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCE--EEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHH
Confidence            3489999999999999 999999999999997  9999998776     4444444444566888999999999999999


Q ss_pred             HHHHHH----HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhh----eeeechhHHHHHHHHhhHHhcCCCCCCC
Q 028056           98 AKSIKE----KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA----YEVNAVGPILVIKHMSPLLKVGGTGIER  169 (214)
Q Consensus        98 ~~~~~~----~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~----~~~n~~~~~~l~~~~~~~l~~~~~~~~~  169 (214)
                      ++++.+    .+|++|+||||||.....  ........+.+.++|++.    +++|+.+++.+++.+.+.|..++.+.  
T Consensus      2210 v~~i~~~~~~~fG~IDILVNNAGi~d~~--~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~-- 2285 (3089)
T 3zen_D         2210 VEWVGTEQTESLGPQSIHLKDAQTPTLL--FPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIAS-- 2285 (3089)
T ss_dssp             HHHHTSCCEEEESSSEEEECCCCCCSEE--EECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC--
T ss_pred             HHHHHhhhhhhcCCCCEEEECCCccccc--CcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--
Confidence            999998    899999999999972100  000112233344556555    99999999999999999998765431  


Q ss_pred             CceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-cc
Q 028056          170 DVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MD  211 (214)
Q Consensus       170 ~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~  211 (214)
                      ....+++.++..+..     ++...|++||+|+.+|+++| .|
T Consensus      2286 ~~~ii~~~ss~~g~~-----g~~~aYsASKaAl~~LtrslA~E 2323 (3089)
T 3zen_D         2286 RLHVVLPGSPNRGMF-----GGDGAYGEAKSALDALENRWSAE 2323 (3089)
T ss_dssp             CEEEEEEECSSTTSC-----SSCSSHHHHGGGHHHHHHHHHHC
T ss_pred             eeEEEEECCcccccC-----CCchHHHHHHHHHHHHHHHHHhc
Confidence            123455555443322     34568999999999999999 45

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.86  E-value=6.3e-21  Score=157.02  Aligned_cols=158  Identities=16%  Similarity=0.165  Sum_probs=119.4

Q ss_pred             cccccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHH
Q 028056           17 TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        17 ~~~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      ..+..+..+++++++|||||+|+||.+++++|+++|++  |++++|+........+.+    .++.++.+|++|.+++.+
T Consensus         9 ~~~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~   82 (330)
T 2pzm_A            9 HHSSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHE--ILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLER   82 (330)
T ss_dssp             -----CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCE--EEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHH
T ss_pred             ccccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHH
Confidence            34456668899999999999999999999999999987  999999765433211111    468899999999999998


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      +++++     ++|+||||||...       ..     +.++++  +++|+.+++.+++++...    +.+      +||+
T Consensus        83 ~~~~~-----~~D~vih~A~~~~-------~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~~~------~iV~  133 (330)
T 2pzm_A           83 AFDSF-----KPTHVVHSAAAYK-------DP-----DDWAED--AATNVQGSINVAKAASKA----GVK------RLLN  133 (330)
T ss_dssp             HHHHH-----CCSEEEECCCCCS-------CT-----TCHHHH--HHHHTHHHHHHHHHHHHH----TCS------EEEE
T ss_pred             HHhhc-----CCCEEEECCccCC-------Cc-----cccChh--HHHHHHHHHHHHHHHHHc----CCC------EEEE
Confidence            88866     7999999999753       11     234444  899999999999998732    233      9999


Q ss_pred             eecCcccCCCCCC--C------CcchhhhhHHHHHHHHHHh
Q 028056          177 LSARVGSIGDNRL--G------GWHSYRASKAALNQCKILA  209 (214)
Q Consensus       177 iss~~~~~~~~~~--~------~~~~Y~asKaa~~~~~~~l  209 (214)
                      +||..........  +      +...|+.+|++++.+++.+
T Consensus       134 ~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~  174 (330)
T 2pzm_A          134 FQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS  174 (330)
T ss_dssp             EEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC
T ss_pred             ecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc
Confidence            9998665432111  2      5679999999999999876

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.85  E-value=7.2e-21  Score=156.84  Aligned_cols=156  Identities=17%  Similarity=0.125  Sum_probs=119.8

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |+++++|||||+|+||.+++++|+++|++  |++++|++...+.  +.+...  ..++.++.+|++|.+++.++++.+  
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYE--VYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV--   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH--
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCE--EEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc--
Confidence            35789999999999999999999999987  9999998765432  111111  246888999999999999988876  


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                         ++|+||||||...           .+.+.+++++.+++|+.++..+++++... ..  .+      ++|++||...+
T Consensus        75 ---~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~--~~------~iv~~SS~~vy  131 (345)
T 2z1m_A           75 ---QPDEVYNLAAQSF-----------VGVSFEQPILTAEVDAIGVLRILEALRTV-KP--DT------KFYQASTSEMF  131 (345)
T ss_dssp             ---CCSEEEECCCCCC-----------HHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CT--TC------EEEEEEEGGGG
T ss_pred             ---CCCEEEECCCCcc-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC--Cc------eEEEEechhhc
Confidence               7999999999642           12345667888999999999999998743 11  12      99999998543


Q ss_pred             CC--------CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IG--------DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~--------~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..        ..+..+...|+.+|++.+.+++.++
T Consensus       132 g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~  166 (345)
T 2z1m_A          132 GKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYR  166 (345)
T ss_dssp             CSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHH
Confidence            21        1234556799999999999999873

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.85  E-value=1.4e-21  Score=153.68  Aligned_cols=147  Identities=17%  Similarity=0.179  Sum_probs=108.6

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCce-eEEEecCCCHHHHHHH
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERL-DVLQLDLTVESTIEAS   97 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~v~~~   97 (214)
                      +.+...++++++++||||+|+||++++++|+++|++  |++++|++++.+.+.+      .++ .++.+|++        
T Consensus        12 ~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~--V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~--------   75 (236)
T 3e8x_A           12 SGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHE--PVAMVRNEEQGPELRE------RGASDIVVANLE--------   75 (236)
T ss_dssp             ---------CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHH------TTCSEEEECCTT--------
T ss_pred             ccccccCcCCCeEEEECCCChHHHHHHHHHHhCCCe--EEEEECChHHHHHHHh------CCCceEEEcccH--------
Confidence            344557789999999999999999999999999997  9999998876443221      257 89999998        


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                       +.+.+.++++|+||||||...               .+++++.+++|+.+++.+++++...    +.+      +||++
T Consensus        76 -~~~~~~~~~~D~vi~~ag~~~---------------~~~~~~~~~~n~~~~~~l~~a~~~~----~~~------~iv~~  129 (236)
T 3e8x_A           76 -EDFSHAFASIDAVVFAAGSGP---------------HTGADKTILIDLWGAIKTIQEAEKR----GIK------RFIMV  129 (236)
T ss_dssp             -SCCGGGGTTCSEEEECCCCCT---------------TSCHHHHHHTTTHHHHHHHHHHHHH----TCC------EEEEE
T ss_pred             -HHHHHHHcCCCEEEECCCCCC---------------CCCccccchhhHHHHHHHHHHHHHc----CCC------EEEEE
Confidence             334445568999999999653               1457778999999999999988432    333      99999


Q ss_pred             ecCcccCCCCCCCCcchhhhhHHHHHHHHH
Q 028056          178 SARVGSIGDNRLGGWHSYRASKAALNQCKI  207 (214)
Q Consensus       178 ss~~~~~~~~~~~~~~~Y~asKaa~~~~~~  207 (214)
                      ||..+..+....+....|+.+|++++.+.+
T Consensus       130 SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~  159 (236)
T 3e8x_A          130 SSVGTVDPDQGPMNMRHYLVAKRLADDELK  159 (236)
T ss_dssp             CCTTCSCGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred             ecCCCCCCCCChhhhhhHHHHHHHHHHHHH
Confidence            997665542111467899999999999877

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.85  E-value=3.2e-20  Score=154.11  Aligned_cols=158  Identities=15%  Similarity=0.222  Sum_probs=123.7

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .++++++|||||+|+||.+++++|+++|++  |++++|+....+...+.+. .+.++.++.+|++|.+++.++++.+   
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~---   79 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGAT--VKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF---   79 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH---
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCe--EEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc---
Confidence            367889999999999999999999999987  9999998876554333322 2457889999999999999888866   


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                        ++|+|||||+...           .+.+.+++.+.+++|+.++..+++++.+.   .+.      .++|++||...+.
T Consensus        80 --~~d~vih~A~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~------~~~v~~SS~~vyg  137 (357)
T 1rkx_A           80 --QPEIVFHMAAQPL-----------VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGV------KAVVNITSDKCYD  137 (357)
T ss_dssp             --CCSEEEECCSCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCC------CEEEEECCGGGBC
T ss_pred             --CCCEEEECCCCcc-----------cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCC------CeEEEecCHHHhC
Confidence              7999999998532           23345667788999999999999998753   112      2999999976432


Q ss_pred             C---------CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 G---------DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~---------~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .         ..+..+...|+.+|.+.+.+++.++
T Consensus       138 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  172 (357)
T 1rkx_A          138 NKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYR  172 (357)
T ss_dssp             CCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            1         1134456899999999999999873

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.84  E-value=2.4e-20  Score=153.94  Aligned_cols=160  Identities=15%  Similarity=0.100  Sum_probs=122.9

Q ss_pred             cccccccccCcEEEEecCCCchhHHHHHHHHhcC-------CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCH
Q 028056           19 SASASVKWKGGVSLVQGASRGIGLEFAKQLLEKN-------DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE   91 (214)
Q Consensus        19 ~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g-------~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   91 (214)
                      .......++++++|||||+|+||.+++++|+++|       ++  |++++|+......      ....++.++.+|++|.
T Consensus         5 ~~~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~--V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~   76 (342)
T 2hrz_A            5 SGRENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEK--FTLIDVFQPEAPA------GFSGAVDARAADLSAP   76 (342)
T ss_dssp             CSCCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEE--EEEEESSCCCCCT------TCCSEEEEEECCTTST
T ss_pred             cCCCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCce--EEEEEccCCcccc------ccCCceeEEEcCCCCH
Confidence            3344566889999999999999999999999999       55  8999998754321      1245688999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcC-CCCCCCC
Q 028056           92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG-GTGIERD  170 (214)
Q Consensus        92 ~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~~~~  170 (214)
                      ++++++++      +++|+|||||+...            ..+.+++.+.+++|+.++..+++++.+...+. +.     
T Consensus        77 ~~~~~~~~------~~~d~vih~A~~~~------------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~-----  133 (342)
T 2hrz_A           77 GEAEKLVE------ARPDVIFHLAAIVS------------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYK-----  133 (342)
T ss_dssp             THHHHHHH------TCCSEEEECCCCCH------------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred             HHHHHHHh------cCCCEEEECCccCc------------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCC-----
Confidence            99887775      47999999999642            13456788899999999999999987654221 12     


Q ss_pred             ceEEEEeecCcccCCCC--------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          171 VAVVANLSARVGSIGDN--------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       171 ~~~iv~iss~~~~~~~~--------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .+||++||...+.+..        +..+...|+.+|++.+.+++.++
T Consensus       134 -~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  180 (342)
T 2hrz_A          134 -PRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYS  180 (342)
T ss_dssp             -CEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             -cEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence             2999999986544311        11256799999999999999874

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.84  E-value=2.8e-20  Score=153.39  Aligned_cols=156  Identities=14%  Similarity=0.051  Sum_probs=118.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh-cCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +++++|||||+|+||++++++|+++|++  |++++|+....+...+.+. ..+.++.++.+|++|++++.+++++     
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYD--VVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCc--EEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----
Confidence            4679999999999999999999999997  9999998877654333322 2255788999999999999988875     


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|+|||||+...       ..    ...+...+.+++|+.++..+++++    ++.+.+      +||++||...+..
T Consensus        77 ~~~d~vih~A~~~~-------~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~------~iv~~SS~~~~g~  135 (341)
T 3enk_A           77 HPITAAIHFAALKA-------VG----ESVAKPIEYYRNNLDSLLSLLRVM----RERAVK------RIVFSSSATVYGV  135 (341)
T ss_dssp             SCCCEEEECCCCCC-------HH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCC------EEEEEEEGGGBCS
T ss_pred             cCCcEEEECccccc-------cC----ccccChHHHHHHHHHHHHHHHHHH----HhCCCC------EEEEEecceEecC
Confidence            38999999999753       11    223344567888999999888765    344433      9999999765422


Q ss_pred             C--------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 D--------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~--------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .        .+..+...|+.+|++.+.+++.++
T Consensus       136 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~  168 (341)
T 3enk_A          136 PERSPIDETFPLSATNPYGQTKLMAEQILRDVE  168 (341)
T ss_dssp             CSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHh
Confidence            1        123445799999999999999873

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.83  E-value=9e-21  Score=149.25  Aligned_cols=142  Identities=14%  Similarity=0.050  Sum_probs=112.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCC--CcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKND--KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~--~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +.+++|+++||||+|+||++++++|+++|+  +  |++++|+++..+...      ..++.++.+|++|++++.++++  
T Consensus        14 ~~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~--V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~--   83 (242)
T 2bka_A           14 FRMQNKSVFILGASGETGRVLLKEILEQGLFSK--VTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ--   83 (242)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSE--EEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS--
T ss_pred             hhhcCCeEEEECCCcHHHHHHHHHHHcCCCCCE--EEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc--
Confidence            346789999999999999999999999999  7  999999887654321      1257889999999988876654  


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                           ++|+||||||...       .       .+.+++.+++|+.++..+++++.    +.+.+      +||++||..
T Consensus        84 -----~~d~vi~~ag~~~-------~-------~~~~~~~~~~n~~~~~~~~~~~~----~~~~~------~iv~~SS~~  134 (242)
T 2bka_A           84 -----GHDVGFCCLGTTR-------G-------KAGAEGFVRVDRDYVLKSAELAK----AGGCK------HFNLLSSKG  134 (242)
T ss_dssp             -----SCSEEEECCCCCH-------H-------HHHHHHHHHHHTHHHHHHHHHHH----HTTCC------EEEEECCTT
T ss_pred             -----CCCEEEECCCccc-------c-------cCCcccceeeeHHHHHHHHHHHH----HCCCC------EEEEEccCc
Confidence                 7899999999642       1       12356778999999998888754    33333      999999987


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      +..+     ....|+++|++++.+++.+
T Consensus       135 ~~~~-----~~~~Y~~sK~~~e~~~~~~  157 (242)
T 2bka_A          135 ADKS-----SNFLYLQVKGEVEAKVEEL  157 (242)
T ss_dssp             CCTT-----CSSHHHHHHHHHHHHHHTT
T ss_pred             CCCC-----CcchHHHHHHHHHHHHHhc
Confidence            6543     3468999999999999876

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.83  E-value=1.5e-20  Score=155.91  Aligned_cols=151  Identities=17%  Similarity=0.186  Sum_probs=118.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ..+++|++|||||+|+||++++++|++. |+. .|++++|++.+.+.+.+.+.  ..++.++.+|++|.+++.++++   
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~-~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~---   90 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAK-KIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE---   90 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCS-EEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT---
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCC-EEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh---
Confidence            4478999999999999999999999999 983 39999998765443333332  3578899999999998887765   


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                          ++|+|||||+...        .+.   ......+.+++|+.|+..+++++.+.    +.+      ++|++||..+
T Consensus        91 ----~~D~Vih~Aa~~~--------~~~---~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~------~~V~~SS~~~  145 (344)
T 2gn4_A           91 ----GVDICIHAAALKH--------VPI---AEYNPLECIKTNIMGASNVINACLKN----AIS------QVIALSTDKA  145 (344)
T ss_dssp             ----TCSEEEECCCCCC--------HHH---HHHSHHHHHHHHHHHHHHHHHHHHHT----TCS------EEEEECCGGG
T ss_pred             ----cCCEEEECCCCCC--------CCc---hhcCHHHHHHHHHHHHHHHHHHHHhC----CCC------EEEEecCCcc
Confidence                6899999999653        111   22345678999999999999998764    222      9999999765


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      ..+      ...|+++|++++.++++++.
T Consensus       146 ~~p------~~~Y~~sK~~~E~~~~~~~~  168 (344)
T 2gn4_A          146 ANP------INLYGATKLCSDKLFVSANN  168 (344)
T ss_dssp             SSC------CSHHHHHHHHHHHHHHHGGG
T ss_pred             CCC------ccHHHHHHHHHHHHHHHHHH
Confidence            443      36899999999999998853

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.83  E-value=1.1e-20  Score=156.55  Aligned_cols=178  Identities=12%  Similarity=-0.008  Sum_probs=128.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHH-hcCCCcEEEEeecCCCCccc------------ccchhhcCCCceeEEEecCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLL-EKNDKGCVIATCRNPNGATG------------LLDLKNRFPERLDVLQLDLTV   90 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~-~~g~~~~vi~~~r~~~~~~~------------~~~~~~~~~~~~~~~~~Dl~~   90 (214)
                      .....|++||||||+|||++.+..|+ +.|++  ++.+++..+..++            ..+.+.+.+.+...+.||++|
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~--vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d  123 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAA--TIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFS  123 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCE--EEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTS
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCC--EEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCC
Confidence            44567999999999999999999998 68887  8877776654432            234556678899999999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECccccCCCCCC---------CCC-----c-------------chhhccHh---hhhh
Q 028056           91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVL---------QPE-----T-------------TLNKVEKS---SLML  140 (214)
Q Consensus        91 ~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~---------~~~-----~-------------~~~~~~~~---~~~~  140 (214)
                      .++++++++++++.+|++|+||||++.....+..         .|.     +             .+...+.+   .+..
T Consensus       124 ~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~  203 (401)
T 4ggo_A          124 DEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVK  203 (401)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHH
Confidence            9999999999999999999999999976311100         000     0             01112233   3444


Q ss_pred             heeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          141 AYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       141 ~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .|....++.+...+...+.|.+.        ++++.+|++...... |...+..++++|+++++.++.| .++
T Consensus       204 vMg~s~~s~w~~al~~a~lla~G--------~siva~SYiGse~t~-P~Y~~G~mG~AKaaLEa~~r~La~eL  267 (401)
T 4ggo_A          204 VMGGEDWERWIKQLSKEGLLEEG--------CITLAYSYIGPEATQ-ALYRKGTIGKAKEHLEATAHRLNKEN  267 (401)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEEE--------EEEEEEECCCCGGGH-HHHTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHhhhHHHHHHHHHHhhhcccCC--------ceEEEEeccCcceee-cCCCccHHHHHHHHHHHHHHHHHHhc
Confidence            55556666777777777777553        399999997765431 1223357899999999999999 443

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.83  E-value=8.5e-20  Score=152.91  Aligned_cols=159  Identities=15%  Similarity=0.070  Sum_probs=119.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc-----ccccchhhcCCC-ceeEEEecCCCHHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-----TGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~-----~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      |++|||||+|+||.+++++|+++|++  |++++|+....     +.+.+.....+. ++.++.+|++|.+++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYE--VHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCE--EEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc-
Confidence            78999999999999999999999987  99999987642     111111111123 6889999999999999888866 


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                          ++|+|||+|+...           .+.+.+++...+++|+.++..+++++.+...+++.+     +++|++||...
T Consensus       106 ----~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~-----~~~v~~SS~~v  165 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSH-----------VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT-----VKYYQAGSSEM  165 (381)
T ss_dssp             ----CCSEEEECCSCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCC-----CEEEEEEEGGG
T ss_pred             ----CCCEEEECCcccC-----------ccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCc-----cEEEEeCcHHH
Confidence                7899999999653           123456678889999999999999999876542211     39999999765


Q ss_pred             cCCC-------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGD-------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~-------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +...       .+..+...|+.+|++.+.+++.++
T Consensus       166 yg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~  200 (381)
T 1n7h_A          166 FGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYR  200 (381)
T ss_dssp             GTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Confidence            4321       123456799999999999999873

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.83  E-value=1.1e-19  Score=148.62  Aligned_cols=148  Identities=16%  Similarity=0.137  Sum_probs=115.9

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .+.+++|||||+|+||.+++++|+++|++  |++++|+... +.    +     ++.++.+|++|.+++.++++.     
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~-----   72 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVE--VFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD-----   72 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH-----
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCE--EEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh-----
Confidence            45689999999999999999999999987  9899998764 21    1     578899999999999888875     


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|+|||||+...           .+.+.+++++.+++|+.++..+++++ +.+.  +.      .++|++||...+..
T Consensus        73 ~~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~------~~iv~~SS~~v~g~  132 (321)
T 2pk3_A           73 IKPDYIFHLAAKSS-----------VKDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LD------CRILTIGSSEEYGM  132 (321)
T ss_dssp             HCCSEEEECCSCCC-----------HHHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CC------CEEEEEEEGGGTBS
T ss_pred             cCCCEEEEcCcccc-----------hhhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CC------CeEEEEccHHhcCC
Confidence            37999999999653           12334567888999999999999998 5542  22      29999999865432


Q ss_pred             C----------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 D----------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~----------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .          .+.++...|+.+|++.+.+++.++
T Consensus       133 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~  167 (321)
T 2pk3_A          133 ILPEESPVSEENQLRPMSPYGVSKASVGMLARQYV  167 (321)
T ss_dssp             CCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            1          123556899999999999999874

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.83  E-value=6.4e-20  Score=152.94  Aligned_cols=158  Identities=15%  Similarity=0.065  Sum_probs=114.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--ccccchhhc---CCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNR---FPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~--~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +|++|||||+|+||.+++++|+++|++  |++++|+....  +.+.+....   .+.++.++.+|++|.+++.++++.+ 
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYE--VHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCE--EEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc-
Confidence            378999999999999999999999986  99999976542  112221111   1356888999999999999888866 


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                          ++|+||||||...       .    +.+.+++.+.+++|+.++..+++++.+...+ +.      +++|++||...
T Consensus        78 ----~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~------~~iv~~SS~~v  135 (372)
T 1db3_A           78 ----QPDEVYNLGAMSH-------V----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KK------TRFYQASTSEL  135 (372)
T ss_dssp             ----CCSEEEECCCCCT-------T----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TT------CEEEEEEEGGG
T ss_pred             ----CCCEEEECCcccC-------c----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CC------cEEEEeCChhh
Confidence                7899999999653       1    1233556778899999999999998766432 11      29999999755


Q ss_pred             cCCC--------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGD--------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~--------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +...        .+..+...|+.+|++++.+++.++
T Consensus       136 ~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  171 (372)
T 1db3_A          136 YGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYR  171 (372)
T ss_dssp             GTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHH
Confidence            4321        123446799999999999999874

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.83  E-value=1.6e-19  Score=150.27  Aligned_cols=157  Identities=13%  Similarity=0.091  Sum_probs=117.7

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHh--cCCCcEEEEeecCCCC-------cccccchhhcCCCceeEEEecCCCHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLE--KNDKGCVIATCRNPNG-------ATGLLDLKNRFPERLDVLQLDLTVEST   93 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~--~g~~~~vi~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dl~~~~~   93 (214)
                      .+++++++||||||+|+||.+++++|++  .|++  |++++|+...       .+.+.......+.++.++.+|++|.++
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   82 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAK--VVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLD   82 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSE--EEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCe--EEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHH
Confidence            3678899999999999999999999999  8887  9999987651       111222222234578899999999998


Q ss_pred             HHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceE
Q 028056           94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV  173 (214)
Q Consensus        94 v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~  173 (214)
                      ++++      ...++|+||||||...             .+.++++..+++|+.++..+++++..    .+       ..
T Consensus        83 ~~~~------~~~~~D~vih~A~~~~-------------~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-------~~  132 (362)
T 3sxp_A           83 LRRL------EKLHFDYLFHQAAVSD-------------TTMLNQELVMKTNYQAFLNLLEIARS----KK-------AK  132 (362)
T ss_dssp             HHHH------TTSCCSEEEECCCCCG-------------GGCCCHHHHHHHHTHHHHHHHHHHHH----TT-------CE
T ss_pred             HHHh------hccCCCEEEECCccCC-------------ccccCHHHHHHHHHHHHHHHHHHHHH----cC-------Cc
Confidence            8776      2358999999999542             13456778899999999999998842    22       26


Q ss_pred             EEEeecCcccCCC-------CCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          174 VANLSARVGSIGD-------NRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       174 iv~iss~~~~~~~-------~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      +|++||...+...       .+..+...|+.+|.+.+.+++.+++
T Consensus       133 ~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~  177 (362)
T 3sxp_A          133 VIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSN  177 (362)
T ss_dssp             EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTT
T ss_pred             EEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhc
Confidence            9999995433221       1223456799999999999998853

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.82  E-value=1.8e-19  Score=150.69  Aligned_cols=157  Identities=15%  Similarity=0.071  Sum_probs=118.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--ccccchhhc----CCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNR----FPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~--~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      |++|||||+|+||.+++++|+++|++  |++++|+....  +.+.+....    .+.++.++.+|++|.+++.++++.+ 
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYE--VHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCE--EEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc-
Confidence            68999999999999999999999987  99999986542  112221110    2346889999999999999888866 


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                          ++|+||||||...           ...+.+++++.+++|+.++..+++++.+...+ +.+      +||++||...
T Consensus       102 ----~~d~vih~A~~~~-----------~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~------~iv~~SS~~~  159 (375)
T 1t2a_A          102 ----KPTEIYNLGAQSH-----------VKISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSV------KFYQASTSEL  159 (375)
T ss_dssp             ----CCSEEEECCSCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTC------EEEEEEEGGG
T ss_pred             ----CCCEEEECCCccc-----------ccccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccc------eEEEecchhh
Confidence                7899999999643           12234667788999999999999998765431 112      9999999766


Q ss_pred             cCCC--------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGD--------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~--------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +...        .+..+...|+.+|++++.+++.++
T Consensus       160 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  195 (375)
T 1t2a_A          160 YGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFR  195 (375)
T ss_dssp             TCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHH
Confidence            4321        123356799999999999999874

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.82  E-value=2.7e-19  Score=147.40  Aligned_cols=159  Identities=16%  Similarity=0.141  Sum_probs=112.0

Q ss_pred             cccccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHH
Q 028056           17 TSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        17 ~~~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      -+|..+...++++++|||||+|+||.+++++|+++|++  |++++|+.......   +... .++.++.+|++|.+++.+
T Consensus        10 ~~~~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~---l~~~-~~~~~~~~Dl~d~~~~~~   83 (333)
T 2q1w_A           10 HSSGLVPRGSHMKKVFITGICGQIGSHIAELLLERGDK--VVGIDNFATGRREH---LKDH-PNLTFVEGSIADHALVNQ   83 (333)
T ss_dssp             -----------CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCGGG---SCCC-TTEEEEECCTTCHHHHHH
T ss_pred             ccCceeeecCCCCEEEEeCCccHHHHHHHHHHHHCCCE--EEEEECCCccchhh---Hhhc-CCceEEEEeCCCHHHHHH
Confidence            34555567788999999999999999999999999987  98899976542211   1111 468899999999999988


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      +++..     ++|+||||||...       ..     +.++++  +++|+.++..+++++.+.    +.+      +||+
T Consensus        84 ~~~~~-----~~D~vih~A~~~~-------~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~~~------~iV~  134 (333)
T 2q1w_A           84 LIGDL-----QPDAVVHTAASYK-------DP-----DDWYND--TLTNCVGGSNVVQAAKKN----NVG------RFVY  134 (333)
T ss_dssp             HHHHH-----CCSEEEECCCCCS-------CT-----TCHHHH--HHHHTHHHHHHHHHHHHT----TCS------EEEE
T ss_pred             HHhcc-----CCcEEEECceecC-------CC-----ccCChH--HHHHHHHHHHHHHHHHHh----CCC------EEEE
Confidence            88752     7999999999753       11     223333  899999999999998652    333      9999


Q ss_pred             eecCcccC----CCC-CC----CCc-chhhhhHHHHHHHHHH-hc
Q 028056          177 LSARVGSI----GDN-RL----GGW-HSYRASKAALNQCKIL-AM  210 (214)
Q Consensus       177 iss~~~~~----~~~-~~----~~~-~~Y~asKaa~~~~~~~-la  210 (214)
                      +||.....    ... +.    .+. ..|+.+|++++.+++. ++
T Consensus       135 ~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~  179 (333)
T 2q1w_A          135 FQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL  179 (333)
T ss_dssp             EEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC
T ss_pred             ECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC
Confidence            99976543    110 00    233 7899999999999988 64

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.82  E-value=2.5e-19  Score=148.82  Aligned_cols=160  Identities=14%  Similarity=0.105  Sum_probs=118.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCC--CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++|||||+|+||.+++++|++. |++  |++++|+..  ..+.+.+..  .+.++.++.+|++|.+++.+++++.     
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDT--VVNIDKLTYAGNLESLSDIS--ESNRYNFEHADICDSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCE--EEEEECCCTTCCGGGGTTTT--TCTTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCe--EEEEecCCCCCchhhhhhhh--cCCCeEEEECCCCCHHHHHHHHhhc-----
Confidence            4999999999999999999998 676  888888752  223232221  1457889999999999999888763     


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|+||||||...           .+.+.+++++.+++|+.++..+++++.+.|...+.. ....++||++||...+...
T Consensus        73 ~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~-~~~~~~iv~~SS~~v~g~~  140 (361)
T 1kew_A           73 QPDAVMHLAAESH-----------VDRSITGPAAFIETNIVGTYALLEVARKYWSALGED-KKNNFRFHHISTDEVYGDL  140 (361)
T ss_dssp             CCSEEEECCSCCC-----------HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHH-HHHHCEEEEEEEGGGGCCC
T ss_pred             CCCEEEECCCCcC-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccc-cccCceEEEeCCHHHhCCC
Confidence            7999999999642           133456778889999999999999999887532100 0000299999996532211


Q ss_pred             ------------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 ------------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ------------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                                        .+..+...|+.+|++++.+++.++
T Consensus       141 ~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  182 (361)
T 1kew_A          141 PHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWR  182 (361)
T ss_dssp             CCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence                              123556899999999999999874

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.82  E-value=2.8e-19  Score=147.08  Aligned_cols=154  Identities=18%  Similarity=0.102  Sum_probs=115.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC--CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      ++++|||||+|+||.+++++|+++|....|++++|+..  ..+.+.+..  .+.++.++.+|++|.+++.+++.      
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~------   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLE--DDPRYTFVKGDVADYELVKELVR------   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTT--TCTTEEEEECCTTCHHHHHHHHH------
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhc--cCCceEEEEcCCCCHHHHHHHhh------
Confidence            45799999999999999999999973224888888753  222222211  13578899999999999888772      


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                       ++|+||||||...           .+.+.+++++.+++|+.++..+++++.+.  . ..+      +||++||...+..
T Consensus        75 -~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~-~~~------~iv~~SS~~vyg~  133 (336)
T 2hun_A           75 -KVDGVVHLAAESH-----------VDRSISSPEIFLHSNVIGTYTLLESIRRE--N-PEV------RFVHVSTDEVYGD  133 (336)
T ss_dssp             -TCSEEEECCCCCC-----------HHHHHHCTHHHHHHHHHHHHHHHHHHHHH--C-TTS------EEEEEEEGGGGCC
T ss_pred             -CCCEEEECCCCcC-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHHh--C-CCc------EEEEeccHHHHCC
Confidence             7899999999642           12345667788999999999999999876  1 112      9999999753321


Q ss_pred             C--------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 D--------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~--------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .        .+..+...|+.+|++.+.+++.++
T Consensus       134 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  166 (336)
T 2hun_A          134 ILKGSFTENDRLMPSSPYSATKAASDMLVLGWT  166 (336)
T ss_dssp             CSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            1        134556799999999999999874

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.81  E-value=3.6e-19  Score=146.86  Aligned_cols=154  Identities=14%  Similarity=0.099  Sum_probs=117.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +++|||||+|+||++++++|+++|++  |++++|+... .+...+.+.. ..++.++.+|++|.++++++++..     +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGID--LIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----M   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCE--EEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc-----C
Confidence            58999999999999999999999987  8888886422 2111122222 246889999999999999888763     7


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC-
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-  186 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-  186 (214)
                      +|+|||||+...           .+.+.+++++.+++|+.++..+++++.+...+         ++||++||...+... 
T Consensus        74 ~d~vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~---------~~iv~~SS~~v~g~~~  133 (347)
T 1orr_A           74 PDSCFHLAGQVA-----------MTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN---------CNIIYSSTNKVYGDLE  133 (347)
T ss_dssp             CSEEEECCCCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT---------CEEEEEEEGGGGTTCT
T ss_pred             CCEEEECCcccC-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC---------ceEEEeccHHHhCCCC
Confidence            999999999642           12344567788999999999999999876532         289999997643211 


Q ss_pred             -----------------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 -----------------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 -----------------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                                             .+..+...|+.+|++.+.+++.++
T Consensus       134 ~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~  180 (347)
T 1orr_A          134 QYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYA  180 (347)
T ss_dssp             TSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence                                   123456799999999999999874

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.81  E-value=3.6e-19  Score=147.13  Aligned_cols=149  Identities=15%  Similarity=0.104  Sum_probs=110.3

Q ss_pred             ccccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHH
Q 028056           18 SSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        18 ~~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      .|.+...+.++|+||||||+|+||.+++++|+++|++  |++++|++..            .++.++.+|++|.+++.++
T Consensus         9 ~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~   74 (347)
T 4id9_A            9 HHSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRT--VRGFDLRPSG------------TGGEEVVGSLEDGQALSDA   74 (347)
T ss_dssp             ------------CEEEETTTSHHHHHHHHHHHHTTCC--EEEEESSCCS------------SCCSEEESCTTCHHHHHHH
T ss_pred             CCCCcccccCCCEEEEECCCChHHHHHHHHHHhCCCE--EEEEeCCCCC------------CCccEEecCcCCHHHHHHH
Confidence            4556667888999999999999999999999999998  9999998754            4578899999999998877


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      ++       .+|+|||+|+...             ...+.+++.+++|+.++..+++++..    .+.+      ++|++
T Consensus        75 ~~-------~~d~vih~A~~~~-------------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~------~~V~~  124 (347)
T 4id9_A           75 IM-------GVSAVLHLGAFMS-------------WAPADRDRMFAVNVEGTRRLLDAASA----AGVR------RFVFA  124 (347)
T ss_dssp             HT-------TCSEEEECCCCCC-------------SSGGGHHHHHHHHTHHHHHHHHHHHH----TTCS------EEEEE
T ss_pred             Hh-------CCCEEEECCcccC-------------cchhhHHHHHHHHHHHHHHHHHHHHH----cCCC------eEEEE
Confidence            76       7899999999653             12234477899999999999998754    3333      99999


Q ss_pred             ecCcccCC----------CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          178 SARVGSIG----------DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       178 ss~~~~~~----------~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ||...+..          ..+..+...|+.+|.+.+.+++.++
T Consensus       125 SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~  167 (347)
T 4id9_A          125 SSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQ  167 (347)
T ss_dssp             EEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence            99654322          1234567899999999999998773

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.80  E-value=1.6e-19  Score=142.55  Aligned_cols=157  Identities=17%  Similarity=0.073  Sum_probs=110.9

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~--g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++++||||+|+||++++++|+++  |++  |++++|++++.+.+       +.++.++.+|++|.+++.++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~--V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFV--AKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCE--EEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcE--EEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc----
Confidence            45789999999999999999999999  675  99999976443221       3467899999999999888775    


Q ss_pred             HcCCccEEEECccccCCCCC--CCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          104 KYGSLNLLINASGILSIPNV--LQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                         .+|+||||||.......  ........+...+.+.+.+++|+.++..+++++...    +.+      +||++||..
T Consensus        69 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~------~iv~~SS~~  135 (253)
T 1xq6_A           69 ---GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVK------HIVVVGSMG  135 (253)
T ss_dssp             ---TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCS------EEEEEEETT
T ss_pred             ---CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CCC------EEEEEcCcc
Confidence               58999999997531000  000000122334455667899999999999887543    323      999999988


Q ss_pred             ccCCCCCCCCc--chhhhhHHHHHHHHHH
Q 028056          182 GSIGDNRLGGW--HSYRASKAALNQCKIL  208 (214)
Q Consensus       182 ~~~~~~~~~~~--~~Y~asKaa~~~~~~~  208 (214)
                      +..+..+...+  ..|+.+|.+++.+++.
T Consensus       136 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~  164 (253)
T 1xq6_A          136 GTNPDHPLNKLGNGNILVWKRKAEQYLAD  164 (253)
T ss_dssp             TTCTTCGGGGGGGCCHHHHHHHHHHHHHT
T ss_pred             CCCCCCccccccchhHHHHHHHHHHHHHh
Confidence            76543222211  3466799999998864

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.80  E-value=1.1e-18  Score=144.27  Aligned_cols=159  Identities=13%  Similarity=0.104  Sum_probs=113.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--ccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +.+++++||||||+|+||.+++++|+++|....|+..+|.....  +.+....  ...++.++.+|++|.+++.++++..
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~   97 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQ--DHPNYYFVKGEIQNGELLEHVIKER   97 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTT--TCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhc--cCCCeEEEEcCCCCHHHHHHHHhhc
Confidence            45678999999999999999999999999654577777765322  1122111  1357899999999999999988864


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                           ++|+|||+|+...       .    +...+++.+.+++|+.++..+++++...    +.+      ++|++||..
T Consensus        98 -----~~d~Vih~A~~~~-------~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~------~~v~~SS~~  151 (346)
T 4egb_A           98 -----DVQVIVNFAAESH-------V----DRSIENPIPFYDTNVIGTVTLLELVKKY----PHI------KLVQVSTDE  151 (346)
T ss_dssp             -----TCCEEEECCCCC--------------------CHHHHHHTHHHHHHHHHHHHS----TTS------EEEEEEEGG
T ss_pred             -----CCCEEEECCcccc-------h----hhhhhCHHHHHHHHHHHHHHHHHHHHhc----CCC------EEEEeCchH
Confidence                 6999999999753       1    1234566778999999999999987543    333      899999975


Q ss_pred             ccCCC---------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGD---------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~---------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+...         .+..+...|+.+|.+.+.+++.++
T Consensus       152 vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  189 (346)
T 4egb_A          152 VYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYY  189 (346)
T ss_dssp             GGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHH
Confidence            43321         123345789999999999999874

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.80  E-value=5.3e-19  Score=146.12  Aligned_cols=155  Identities=17%  Similarity=0.121  Sum_probs=115.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC------cccccchhhc-CCCceeEEEecCCCHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG------ATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~------~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      +|++|||||+|+||.+++++|+++|++  |++++|+...      .+...+.+.. .+.++.++.+|++|.+++.+++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYL--PVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCC--EEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh
Confidence            478999999999999999999999998  8888886543      2221111211 245788999999999998888775


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      .     ++|+|||||+...       .    ..+.+++++.+++|+.++..+++++.    +.+.+      ++|++||.
T Consensus        80 ~-----~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~------~iv~~SS~  133 (348)
T 1ek6_A           80 Y-----SFMAVIHFAGLKA-------V----GESVQKPLDYYRVNLTGTIQLLEIMK----AHGVK------NLVFSSSA  133 (348)
T ss_dssp             C-----CEEEEEECCSCCC-------H----HHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCC------EEEEEEEG
T ss_pred             c-----CCCEEEECCCCcC-------c----cchhhchHHHHHHHHHHHHHHHHHHH----HhCCC------EEEEECcH
Confidence            3     7999999999653       1    11345667889999999999998764    33333      99999997


Q ss_pred             cccCCC--------CCC-CCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGD--------NRL-GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~--------~~~-~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+...        .+. +....|+.+|++++.+++.++
T Consensus       134 ~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~  172 (348)
T 1ek6_A          134 TVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLC  172 (348)
T ss_dssp             GGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHH
Confidence            654321        111 236799999999999999874

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.80  E-value=3e-19  Score=150.41  Aligned_cols=162  Identities=15%  Similarity=0.085  Sum_probs=116.0

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc-----------------cccchhhcCCCceeEEEec
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-----------------GLLDLKNRFPERLDVLQLD   87 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~-----------------~~~~~~~~~~~~~~~~~~D   87 (214)
                      ..++.+||||||+|.||.+++++|+++|++  |++++|+.....                 .+.+.....+.++.++.+|
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~D   85 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYE--VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD   85 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCe--EEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECC
Confidence            356889999999999999999999999997  888887532110                 1111111124578899999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCC
Q 028056           88 LTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI  167 (214)
Q Consensus        88 l~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~  167 (214)
                      ++|.+++.++++..     ++|+||||||...        ......+++.+...+++|+.|+..+++++.+.    +.+ 
T Consensus        86 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~--------~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~-  147 (404)
T 1i24_A           86 ICDFEFLAESFKSF-----EPDSVVHFGEQRS--------APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEE-  147 (404)
T ss_dssp             TTSHHHHHHHHHHH-----CCSEEEECCSCCC--------HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTT-
T ss_pred             CCCHHHHHHHHhcc-----CCCEEEECCCCCC--------ccchhhCccchhhhHHHHHHHHHHHHHHHHHh----CCC-
Confidence            99999999888765     6999999999653        11122355667778999999999999988654    110 


Q ss_pred             CCCceEEEEeecCcccCCC---------------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          168 ERDVAVVANLSARVGSIGD---------------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       168 ~~~~~~iv~iss~~~~~~~---------------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                          .++|++||...+...                     .+..+...|+.+|++.+.+++.++
T Consensus       148 ----~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  207 (404)
T 1i24_A          148 ----CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTC  207 (404)
T ss_dssp             ----CEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             ----cEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHH
Confidence                189999997543211                     123446789999999999998873

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.80  E-value=8e-19  Score=144.30  Aligned_cols=155  Identities=13%  Similarity=0.012  Sum_probs=115.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +++||||||+|+||.+++++|+++|++  |++++|+...... ..+... ...++.++.+|++|.+++.++++.+     
T Consensus        14 ~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   85 (335)
T 1rpn_A           14 TRSALVTGITGQDGAYLAKLLLEKGYR--VHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA-----   85 (335)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCe--EEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc-----
Confidence            578999999999999999999999987  9999998765321 111110 1346889999999999999888866     


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|+|||+|+...           .+.+.+++.+.+++|+.++..+++++.+.    +..     .++|++||...+.+.
T Consensus        86 ~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~-----~~~v~~SS~~v~g~~  145 (335)
T 1rpn_A           86 QPQEVYNLAAQSF-----------VGASWNQPVTTGVVDGLGVTHLLEAIRQF----SPE-----TRFYQASTSEMFGLI  145 (335)
T ss_dssp             CCSEEEECCSCCC-----------HHHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTT-----SEEEEEEEGGGGCSC
T ss_pred             CCCEEEECccccc-----------hhhhhhChHHHHHHHHHHHHHHHHHHHHh----CCC-----CeEEEEeCHHHhCCC
Confidence            7899999999642           12223456778999999999999988654    210     299999997554321


Q ss_pred             --------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 --------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 --------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                              .+..+...|+.+|.+.+.+++.++
T Consensus       146 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~  177 (335)
T 1rpn_A          146 QAERQDENTPFYPRSPYGVAKLYGHWITVNYR  177 (335)
T ss_dssp             SSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcccCCCCCChhHHHHHHHHHHHHHHH
Confidence                    112335689999999999999874

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.80  E-value=8.5e-19  Score=147.43  Aligned_cols=155  Identities=15%  Similarity=0.099  Sum_probs=114.1

Q ss_pred             cEEEEecCCCchhHHHHHHHH-hcCCCcEEEEeecCCCCc---------ccccchhhcC-----CCc---eeEEEecCCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLL-EKNDKGCVIATCRNPNGA---------TGLLDLKNRF-----PER---LDVLQLDLTV   90 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~-~~g~~~~vi~~~r~~~~~---------~~~~~~~~~~-----~~~---~~~~~~Dl~~   90 (214)
                      +++|||||+|+||.+++++|+ ++|++  |++++|+....         +.+.+.+.+.     ..+   +.++.+|++|
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d   80 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHS--VVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCE--EEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCE--EEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence            489999999999999999999 99987  88888876542         2222111221     124   8899999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCC
Q 028056           91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERD  170 (214)
Q Consensus        91 ~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~  170 (214)
                      .+++.+++++    ++++|+|||||+...       .    ..+.+++++.+++|+.+++.+++++..    .+.+    
T Consensus        81 ~~~~~~~~~~----~~~~d~vih~A~~~~-------~----~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~----  137 (397)
T 1gy8_A           81 EDFLNGVFTR----HGPIDAVVHMCAFLA-------V----GESVRDPLKYYDNNVVGILRLLQAMLL----HKCD----  137 (397)
T ss_dssp             HHHHHHHHHH----SCCCCEEEECCCCCC-------H----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCC----
T ss_pred             HHHHHHHHHh----cCCCCEEEECCCccC-------c----CcchhhHHHHHHHHhHHHHHHHHHHHH----hCCC----
Confidence            9998877764    456999999999653       1    124456778899999999999998643    3333    


Q ss_pred             ceEEEEeecCcccCCCC---------------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          171 VAVVANLSARVGSIGDN---------------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       171 ~~~iv~iss~~~~~~~~---------------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                        +||++||........               +..+...|+.+|++.+.+++.++
T Consensus       138 --~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~  190 (397)
T 1gy8_A          138 --KIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCA  190 (397)
T ss_dssp             --EEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHH
T ss_pred             --EEEEECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHH
Confidence              999999965432210               11235799999999999999874

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.80  E-value=5.6e-20  Score=151.31  Aligned_cols=155  Identities=18%  Similarity=0.166  Sum_probs=116.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-CCCceeEE-EecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVL-QLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~Dl~~~~~v~~~~~~~  101 (214)
                      ..++++++|||||+|+||++++++|+++|++  |++++|+....+.+.+.+.. .+.++.++ .+|++|.++++++++  
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   82 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYK--VRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK--   82 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc--
Confidence            4468899999999999999999999999987  99999986554433332221 23568888 899999988776654  


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                           ++|+|||||+...       ..       +++.+.+++|+.++..+++++.+.   .+.      .++|++||..
T Consensus        83 -----~~d~vih~A~~~~-------~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~~------~~iv~~SS~~  134 (342)
T 1y1p_A           83 -----GAAGVAHIASVVS-------FS-------NKYDEVVTPAIGGTLNALRAAAAT---PSV------KRFVLTSSTV  134 (342)
T ss_dssp             -----TCSEEEECCCCCS-------CC-------SCHHHHHHHHHHHHHHHHHHHHTC---TTC------CEEEEECCGG
T ss_pred             -----CCCEEEEeCCCCC-------CC-------CCHHHHHHHHHHHHHHHHHHHHhC---CCC------cEEEEeccHH
Confidence                 6899999999653       11       245668899999999999988642   222      2999999986


Q ss_pred             ccCCCC----------------------------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDN----------------------------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~----------------------------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ......                            +..+...|+.+|++.+.+++.++
T Consensus       135 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  191 (342)
T 1y1p_A          135 SALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFM  191 (342)
T ss_dssp             GTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHH
Confidence            653210                            01234789999999999999884

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.79  E-value=3.7e-19  Score=147.34  Aligned_cols=158  Identities=14%  Similarity=0.090  Sum_probs=119.9

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC-C----CceeEEEecCCCHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-P----ERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~----~~~~~~~~Dl~~~~~v~~~   97 (214)
                      .+.+++++||||||+|+||.+++++|+++|++  |++++|+........+..... .    .++.++.+|++|.+++.++
T Consensus        20 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   97 (351)
T 3ruf_A           20 QLIFSPKTWLITGVAGFIGSNLLEKLLKLNQV--VIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQV   97 (351)
T ss_dssp             HHHHSCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHH
T ss_pred             hCCCCCCeEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH
Confidence            46678899999999999999999999999987  999999876543322222111 1    5789999999999988877


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                      ++       .+|+|||+|+...           .....+++.+.+++|+.++..+++++...    +.+      ++|++
T Consensus        98 ~~-------~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~------~~v~~  149 (351)
T 3ruf_A           98 MK-------GVDHVLHQAALGS-----------VPRSIVDPITTNATNITGFLNILHAAKNA----QVQ------SFTYA  149 (351)
T ss_dssp             TT-------TCSEEEECCCCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCS------EEEEE
T ss_pred             hc-------CCCEEEECCccCC-----------cchhhhCHHHHHHHHHHHHHHHHHHHHHc----CCC------EEEEE
Confidence            76       7899999999643           12344566778999999999999987543    322      99999


Q ss_pred             ecCcccCCCC--------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          178 SARVGSIGDN--------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       178 ss~~~~~~~~--------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ||...+....        +..+...|+.+|.+.+.+++.++
T Consensus       150 SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  190 (351)
T 3ruf_A          150 ASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYA  190 (351)
T ss_dssp             EEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             ecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHH
Confidence            9976543211        12345789999999999998873

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.79  E-value=1.3e-18  Score=143.30  Aligned_cols=153  Identities=18%  Similarity=0.122  Sum_probs=110.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc-CCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ++|||||+|+||++++++|+++|++  |++++|.........+.+.. .+.++.++.+|++|++++.+++++.     ++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHD--VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCE--EEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CC
Confidence            6899999999999999999999997  87777654332221111111 1346788999999999988887652     69


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC--
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~--  186 (214)
                      |+||||||...       ..    ...+.+.+.+++|+.+++.+++++..    .+.+      +||++||.......  
T Consensus        75 D~vih~A~~~~-------~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~------~iv~~SS~~~~g~~~~  133 (338)
T 1udb_A           75 DTVIHFAGLKA-------VG----ESVQKPLEYYDNNVNGTLRLISAMRA----ANVK------NFIFSSSATVYGDNPK  133 (338)
T ss_dssp             SEEEECCSCCC-------HH----HHHHCHHHHHHHHHHHHHHHHHHHHH----HTCC------EEEEEEEGGGGCSCCS
T ss_pred             CEEEECCccCc-------cc----cchhcHHHHHHHHHHHHHHHHHHHHh----cCCC------eEEEEccHHHhCCCCC
Confidence            99999999642       11    12344567789999999999887543    3333      99999997654211  


Q ss_pred             ------CCC-CCcchhhhhHHHHHHHHHHhc
Q 028056          187 ------NRL-GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ------~~~-~~~~~Y~asKaa~~~~~~~la  210 (214)
                            .+. ++...|+.+|++++.+++.++
T Consensus       134 ~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~  164 (338)
T 1udb_A          134 IPYVESFPTGTPQSPYGKSKLMVEQILTDLQ  164 (338)
T ss_dssp             SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCcCcccCCCCCCChHHHHHHHHHHHHHHHH
Confidence                  111 236799999999999999884

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.79  E-value=1.2e-18  Score=144.44  Aligned_cols=157  Identities=11%  Similarity=0.067  Sum_probs=118.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc-cccchhhcC----CCceeEEEecCCCHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT-GLLDLKNRF----PERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~-~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      ++++++++|||||+|+||.+++++|+++|++  |++++|+..... .+.+.....    +.++.++.+|++|.+++.+++
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~  100 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQK--VVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC  100 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh
Confidence            4567889999999999999999999999987  999998765321 122211111    246889999999999888776


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +       ++|+|||+|+...       .    ..+.+++++.+++|+.++..+++++.+.    +.+      ++|++|
T Consensus       101 ~-------~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~------~~v~~S  152 (352)
T 1sb8_A          101 A-------GVDYVLHQAALGS-------V----PRSINDPITSNATNIDGFLNMLIAARDA----KVQ------SFTYAA  152 (352)
T ss_dssp             T-------TCSEEEECCSCCC-------H----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCS------EEEEEE
T ss_pred             c-------CCCEEEECCcccC-------c----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCC------EEEEec
Confidence            6       7899999999643       1    1234567788999999999999988643    333      999999


Q ss_pred             cCcccCCCC--------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          179 ARVGSIGDN--------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       179 s~~~~~~~~--------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      |...+.+..        +..+...|+.+|++.+.+++.++
T Consensus       153 S~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  192 (352)
T 1sb8_A          153 SSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFS  192 (352)
T ss_dssp             EGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             cHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHH
Confidence            987654321        11346799999999999998874

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.79  E-value=1.6e-18  Score=145.35  Aligned_cols=152  Identities=13%  Similarity=-0.041  Sum_probs=116.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++.+++++|||||+|+||.+++++|+++|++  |++++|+........      ..++.++.+|++|.+++.++++    
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~------~~~v~~~~~Dl~d~~~~~~~~~----   92 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHY--VIASDWKKNEHMTED------MFCDEFHLVDLRVMENCLKVTE----   92 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCSSSCGG------GTCSEEEECCTTSHHHHHHHHT----
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCe--EEEEECCCccchhhc------cCCceEEECCCCCHHHHHHHhC----
Confidence            4456789999999999999999999999987  999999876533211      2367889999999998887764    


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                         .+|+|||+|+...       .   .....+++++.+++|+.++..+++++..    .+.+      ++|++||...+
T Consensus        93 ---~~d~Vih~A~~~~-------~---~~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~------~~V~~SS~~v~  149 (379)
T 2c5a_A           93 ---GVDHVFNLAADMG-------G---MGFIQSNHSVIMYNNTMISFNMIEAARI----NGIK------RFFYASSACIY  149 (379)
T ss_dssp             ---TCSEEEECCCCCC-------C---HHHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCS------EEEEEEEGGGS
T ss_pred             ---CCCEEEECceecC-------c---ccccccCHHHHHHHHHHHHHHHHHHHHH----cCCC------EEEEEeehhee
Confidence               6899999999653       1   1122356777899999999999998853    2332      99999997543


Q ss_pred             CCCC---------------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDN---------------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~---------------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ....               +..+...|+.+|.+.+.+++.++
T Consensus       150 ~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~  191 (379)
T 2c5a_A          150 PEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYN  191 (379)
T ss_dssp             CGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHH
Confidence            3210               23456789999999999998873

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.78  E-value=2.6e-18  Score=140.03  Aligned_cols=147  Identities=20%  Similarity=0.202  Sum_probs=111.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      ++|||||+|+||++++++|+++|++  |++++|.......   ..   ..++.++.+|++|++++.+++++.     .+|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~~~~---~~---~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   68 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLE--VAVLDNLATGKRE---NV---PKGVPFFRVDLRDKEGVERAFREF-----RPT   68 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCE--EEEECCCSSCCGG---GS---CTTCCEECCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCE--EEEEECCCcCchh---hc---ccCeEEEECCCCCHHHHHHHHHhc-----CCC
Confidence            6999999999999999999999997  8888885432111   11   135778999999999998888753     789


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC---
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD---  186 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~---  186 (214)
                      ++||+|+...           .+.+.+++.+.+++|+.+++.+++++..    .+.+      ++|++||..+..+.   
T Consensus        69 ~vi~~a~~~~-----------~~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~------~iv~~SS~~~~~g~~~~  127 (311)
T 2p5y_A           69 HVSHQAAQAS-----------VKVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVE------KLVFASTGGAIYGEVPE  127 (311)
T ss_dssp             EEEECCSCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCS------EEEEEEEHHHHHCCCCT
T ss_pred             EEEECccccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCC------EEEEeCCChhhcCCCCC
Confidence            9999998642           1234566778899999999999998753    2333      99999997222211   


Q ss_pred             -------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 -------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 -------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                             .+..+...|+.+|++++.+++.++
T Consensus       128 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  158 (311)
T 2p5y_A          128 GERAEETWPPRPKSPYAASKAAFEHYLSVYG  158 (311)
T ss_dssp             TCCBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence                   112346799999999999999874

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.78  E-value=6.4e-19  Score=145.19  Aligned_cols=156  Identities=17%  Similarity=0.107  Sum_probs=109.4

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh--cCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN--RFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++|++|||||+|+||++++++|+++|++  |+++.|+....+.......  ....++.++.+|++|.+++.++++   
T Consensus         2 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   76 (337)
T 2c29_D            2 GSQSETVCVTGASGFIGSWLVMRLLERGYT--VRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK---   76 (337)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT---
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCE--EEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc---
Confidence            357899999999999999999999999997  8888888764332221111  001257889999999988877765   


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                          .+|+|||+|+...          ....  +...+.+++|+.|+..+++++.+..   +.      .+||++||..+
T Consensus        77 ----~~d~Vih~A~~~~----------~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~------~riV~~SS~~~  131 (337)
T 2c29_D           77 ----GCTGVFHVATPMD----------FESK--DPENEVIKPTIEGMLGIMKSCAAAK---TV------RRLVFTSSAGT  131 (337)
T ss_dssp             ----TCSEEEECCCCCC----------SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS---CC------CEEEEECCGGG
T ss_pred             ----CCCEEEEeccccC----------CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC---Cc------cEEEEeeeHhh
Confidence                5799999998431          1111  1224578999999999999987642   12      29999999875


Q ss_pred             cCCCCCC-------------------CCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRL-------------------GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~-------------------~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +.+....                   +....|+.+|.+.+.+.+.++
T Consensus       132 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  178 (337)
T 2c29_D          132 VNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYA  178 (337)
T ss_dssp             TSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHH
Confidence            5432100                   123469999999999887763

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.78  E-value=4.6e-18  Score=139.93  Aligned_cols=149  Identities=19%  Similarity=0.164  Sum_probs=112.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhc---C---CCcEEEEeecCCCC--cccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEK---N---DKGCVIATCRNPNG--ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~---g---~~~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ++|||||+|+||.+++++|+++   |   ++  |++++|+...  .+.+.+..  .+.++.++.+|++|.+++.+++   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~--V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~---   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADE--VIVLDSLTYAGNRANLAPVD--ADPRLRFVHGDIRDAGLLAREL---   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSE--EEEEECCCTTCCGGGGGGGT--TCTTEEEEECCTTCHHHHHHHT---
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceE--EEEEECCCccCchhhhhhcc--cCCCeEEEEcCCCCHHHHHHHh---
Confidence            6999999999999999999996   6   65  8888887532  12222211  1357889999999998887766   


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                          .++|+|||+|+...           .+.+.+++++.+++|+.++..+++++.+.    +.+      +||++||..
T Consensus        75 ----~~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~------~~v~~SS~~  129 (337)
T 1r6d_A           75 ----RGVDAIVHFAAESH-----------VDRSIAGASVFTETNVQGTQTLLQCAVDA----GVG------RVVHVSTNQ  129 (337)
T ss_dssp             ----TTCCEEEECCSCCC-----------HHHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCC------EEEEEEEGG
T ss_pred             ----cCCCEEEECCCccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCC------EEEEecchH
Confidence                47999999999642           12344567788999999999999998765    222      999999975


Q ss_pred             ccCCC--------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGD--------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~--------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+...        .+..+...|+.+|.+.+.+++.++
T Consensus       130 vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  166 (337)
T 1r6d_A          130 VYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYH  166 (337)
T ss_dssp             GGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Confidence            43211        134556899999999999998874

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.77  E-value=2.5e-18  Score=133.71  Aligned_cols=127  Identities=13%  Similarity=0.016  Sum_probs=101.8

Q ss_pred             cEEEEecCCCchhHHHHHHHH-hcCCCcEEEEeecCCC-CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           29 GVSLVQGASRGIGLEFAKQLL-EKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~-~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      |+++||||+|+||++++++|+ +.|++  |++++|+++ +++.+.    ..+.++.++++|++|++++.++++       
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~--V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMH--ITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCE--EEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCce--EEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------
Confidence            789999999999999999999 89997  999999876 544322    134678999999999999888776       


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      .+|+||||+|..                          |+.     ++.+++.+++.+.+      +||++||..+..+ 
T Consensus        73 ~~d~vv~~ag~~--------------------------n~~-----~~~~~~~~~~~~~~------~iv~iSs~~~~~~-  114 (221)
T 3r6d_A           73 NAEVVFVGAMES--------------------------GSD-----MASIVKALSRXNIR------RVIGVSMAGLSGE-  114 (221)
T ss_dssp             TCSEEEESCCCC--------------------------HHH-----HHHHHHHHHHTTCC------EEEEEEETTTTSC-
T ss_pred             CCCEEEEcCCCC--------------------------Chh-----HHHHHHHHHhcCCC------eEEEEeeceecCC-
Confidence            689999999831                          111     77888888877655      9999999887665 


Q ss_pred             CCCCCcc----------hhhhhHHHHHHHHHH
Q 028056          187 NRLGGWH----------SYRASKAALNQCKIL  208 (214)
Q Consensus       187 ~~~~~~~----------~Y~asKaa~~~~~~~  208 (214)
                        .+...          .|+.+|.+++.+++.
T Consensus       115 --~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~  144 (221)
T 3r6d_A          115 --FPVALEKWTFDNLPISYVQGERQARNVLRE  144 (221)
T ss_dssp             --SCHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred             --CCcccccccccccccHHHHHHHHHHHHHHh
Confidence              23333          899999999998875

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.77  E-value=2.5e-18  Score=133.46  Aligned_cols=129  Identities=13%  Similarity=0.153  Sum_probs=105.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCC-HHHHHHHHHHHHHHcCCc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~v  108 (214)
                      +++||||+|+||++++++|+++|++  |++++|++++.+..        .++.++++|++| .+++.++++       .+
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~-------~~   64 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQ--IYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH-------GM   64 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCE--EEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT-------TC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc-------CC
Confidence            6999999999999999999999987  99999987654322        468899999999 888876665       68


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |+||||||...                   .+.+++|+.++..+++++.    +.+.+      ++|++||..+..+   
T Consensus        65 d~vi~~ag~~~-------------------~~~~~~n~~~~~~l~~a~~----~~~~~------~iv~~SS~~~~~~---  112 (219)
T 3dqp_A           65 DAIINVSGSGG-------------------KSLLKVDLYGAVKLMQAAE----KAEVK------RFILLSTIFSLQP---  112 (219)
T ss_dssp             SEEEECCCCTT-------------------SSCCCCCCHHHHHHHHHHH----HTTCC------EEEEECCTTTTCG---
T ss_pred             CEEEECCcCCC-------------------CCcEeEeHHHHHHHHHHHH----HhCCC------EEEEECcccccCC---
Confidence            99999999652                   1268999999999998874    33333      9999999877654   


Q ss_pred             CCC-------cchhhhhHHHHHHHHH
Q 028056          189 LGG-------WHSYRASKAALNQCKI  207 (214)
Q Consensus       189 ~~~-------~~~Y~asKaa~~~~~~  207 (214)
                      .+.       ...|+.+|.+++.+.+
T Consensus       113 ~~~~e~~~~~~~~Y~~sK~~~e~~~~  138 (219)
T 3dqp_A          113 EKWIGAGFDALKDYYIAKHFADLYLT  138 (219)
T ss_dssp             GGCCSHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CcccccccccccHHHHHHHHHHHHHH
Confidence            233       6799999999999885

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.77  E-value=1.9e-18  Score=144.67  Aligned_cols=153  Identities=12%  Similarity=0.061  Sum_probs=114.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ..++++++|||||+|+||.+++++|+++| ++  |++++|+.......   +. ...++.++.+|++|++++.++++   
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~--V~~~~r~~~~~~~~---l~-~~~~v~~~~~Dl~d~~~l~~~~~---   98 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQ--VHVVDNLLSAEKIN---VP-DHPAVRFSETSITDDALLASLQD---   98 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSE--EEEECCCTTCCGGG---SC-CCTTEEEECSCTTCHHHHHHCCS---
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCce--EEEEECCCCCchhh---cc-CCCceEEEECCCCCHHHHHHHhh---
Confidence            45788999999999999999999999999 76  88899886543211   11 13578899999999988776654   


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcC-CCCCCCCceEEEEeecCc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG-GTGIERDVAVVANLSARV  181 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~~~~~~~iv~iss~~  181 (214)
                          .+|+|||+|+...           .+.+.+++++.+++|+.++..+++++..    . +.+      ++|++||..
T Consensus        99 ----~~d~Vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~------~~V~~SS~~  153 (377)
T 2q1s_A           99 ----EYDYVFHLATYHG-----------NQSSIHDPLADHENNTLTTLKLYERLKH----FKRLK------KVVYSAAGC  153 (377)
T ss_dssp             ----CCSEEEECCCCSC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCC------EEEEEEEC-
T ss_pred             ----CCCEEEECCCccC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCC------eEEEeCCHH
Confidence                7899999999653           1233456778899999999999998742    2 222      999999975


Q ss_pred             ccC----------CCC---CC-CCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSI----------GDN---RL-GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~----------~~~---~~-~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+.          ...   +. .+...|+.+|.+.+.+++.++
T Consensus       154 vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  196 (377)
T 2q1s_A          154 SIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYH  196 (377)
T ss_dssp             -------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHH
Confidence            432          111   22 456789999999999999874

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.77  E-value=3.7e-18  Score=140.62  Aligned_cols=143  Identities=11%  Similarity=0.010  Sum_probs=106.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      ++|||||+|+||.+++++|+++|++  |++++|++...+.+.      ..++.++.+|++|.+++.++++       .+|
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~l~------~~~~~~~~~Dl~d~~~~~~~~~-------~~d   79 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHD--LVLIHRPSSQIQRLA------YLEPECRVAEMLDHAGLERALR-------GLD   79 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCE--EEEEECTTSCGGGGG------GGCCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCE--EEEEecChHhhhhhc------cCCeEEEEecCCCHHHHHHHHc-------CCC
Confidence            8999999999999999999999987  999999876644322      1257889999999998877765       689


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC--
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN--  187 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~--  187 (214)
                      +|||+|+...             ...+++++.+++|+.++..+++++.+.    +.+      ++|++||.....+..  
T Consensus        80 ~vih~a~~~~-------------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~------~~v~~SS~~~~~~~~~~  136 (342)
T 2x4g_A           80 GVIFSAGYYP-------------SRPRRWQEEVASALGQTNPFYAACLQA----RVP------RILYVGSAYAMPRHPQG  136 (342)
T ss_dssp             EEEEC-------------------------CHHHHHHHHHHHHHHHHHHH----TCS------CEEEECCGGGSCCCTTS
T ss_pred             EEEECCccCc-------------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCC------eEEEECCHHhhCcCCCC
Confidence            9999999542             123456778999999999999998764    222      899999987654321  


Q ss_pred             -------CCCC----cchhhhhHHHHHHHHHHhc
Q 028056          188 -------RLGG----WHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 -------~~~~----~~~Y~asKaa~~~~~~~la  210 (214)
                             +..+    ...|+.+|.+.+.+++.++
T Consensus       137 ~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~  170 (342)
T 2x4g_A          137 LPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQA  170 (342)
T ss_dssp             SCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCccccccChHHHHHHHHHHHHHHHh
Confidence                   1112    6799999999999999874

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.77  E-value=8.7e-18  Score=138.78  Aligned_cols=148  Identities=12%  Similarity=0.098  Sum_probs=112.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCc--ccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGA--TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~--g~~~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +++|||||+|+||.+++++|+++  |++  |++++|+....  +.+.+.   .+.++.++.+|++|.+++.++++     
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~-----   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVH--VTVLDKLTYAGNKANLEAI---LGDRVELVVGDIADAELVDKLAA-----   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCE--EEEEECCCTTCCGGGTGGG---CSSSEEEEECCTTCHHHHHHHHT-----
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCE--EEEEeCCCCCCChhHHhhh---ccCCeEEEECCCCCHHHHHHHhh-----
Confidence            68999999999999999999999  675  99999876321  112211   13578899999999998887776     


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                        .+|+|||+|+...           .+.+.+++++.+++|+.++..+++++.+.    +       .++|++||...+.
T Consensus        75 --~~d~vih~A~~~~-----------~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-------~~~v~~SS~~vyg  130 (348)
T 1oc2_A           75 --KADAIVHYAAESH-----------NDNSLNDPSPFIHTNFIGTYTLLEAARKY----D-------IRFHHVSTDEVYG  130 (348)
T ss_dssp             --TCSEEEECCSCCC-----------HHHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-------CEEEEEEEGGGGC
T ss_pred             --cCCEEEECCcccC-----------ccchhhCHHHHHHHHHHHHHHHHHHHHHh----C-------CeEEEecccceeC
Confidence              4699999999642           12344567788999999999999998765    1       2899999975332


Q ss_pred             CC--------------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GD--------------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~--------------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..                    .+..+...|+.+|++.+.+++.++
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  176 (348)
T 1oc2_A          131 DLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWV  176 (348)
T ss_dssp             CBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            11                    123456799999999999999873

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.77  E-value=8.2e-18  Score=137.97  Aligned_cols=148  Identities=14%  Similarity=0.087  Sum_probs=113.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      +++|||||+|+||.+++++|+++|++  |++++|+.....   +.+   ..++.++.+|++|.+++.+++++     .++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~---~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLS--VVVVDNLQTGHE---DAI---TEGAKFYNGDLRDKAFLRDVFTQ-----ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCG---GGS---CTTSEEEECCTTCHHHHHHHHHH-----SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCE--EEEEeCCCcCch---hhc---CCCcEEEECCCCCHHHHHHHHhh-----cCC
Confidence            58999999999999999999999987  888888765422   111   23688999999999998888765     379


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC--
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~--  186 (214)
                      |+|||+|+...       .    ..+.+++++.+++|+.++..+++++..    .+.+      ++|++||.......  
T Consensus        69 d~vih~a~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~------~~v~~Ss~~~~~~~~~  127 (330)
T 2c20_A           69 EAVMHFAADSL-------V----GVSMEKPLQYYNNNVYGALCLLEVMDE----FKVD------KFIFSSTAATYGEVDV  127 (330)
T ss_dssp             EEEEECCCCCC-------H----HHHHHSHHHHHHHHHHHHHHHHHHHHH----TTCC------EEEEECCGGGGCSCSS
T ss_pred             CEEEECCcccC-------c----cccccCHHHHHHHHhHHHHHHHHHHHH----cCCC------EEEEeCCceeeCCCCC
Confidence            99999999653       1    124456778899999999999998643    3333      89999997654321  


Q ss_pred             ------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 ------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                            .+..+...|+.+|.+.+.+++.++
T Consensus       128 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (330)
T 2c20_A          128 DLITEETMTNPTNTYGETKLAIEKMLHWYS  157 (330)
T ss_dssp             SSBCTTSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCCChHHHHHHHHHHHHHHHH
Confidence                  123346899999999999999874

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.77  E-value=3.8e-18  Score=139.22  Aligned_cols=139  Identities=14%  Similarity=0.135  Sum_probs=85.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      ++++|||||+|+||.+++++|+++|++  |++++|+...           + +  ++.+|++|.+++.++++..     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~-----~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWH--AVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF-----Q   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEC--------------------------------CHHHHHHH-----C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCe--EEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh-----C
Confidence            578999999999999999999999986  8888886543           1 2  6789999999998888765     7


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC-
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-  186 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-  186 (214)
                      +|+||||||...       .    +.+.+++++.+++|+.++..+++++.+.    +       .++|++||.....+. 
T Consensus        61 ~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-------~~~v~~SS~~v~~~~~  118 (315)
T 2ydy_A           61 PHVIVHCAAERR-------P----DVVENQPDAASQLNVDASGNLAKEAAAV----G-------AFLIYISSDYVFDGTN  118 (315)
T ss_dssp             CSEEEECC------------------------------CHHHHHHHHHHHHH----T-------CEEEEEEEGGGSCSSS
T ss_pred             CCEEEECCcccC-------h----hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEchHHHcCCCC
Confidence            899999999653       1    1245667889999999999999998753    1       289999998765431 


Q ss_pred             ------CCCCCcchhhhhHHHHHHHHHHh
Q 028056          187 ------NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       187 ------~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                            .+..+...|+.+|++++.+++.+
T Consensus       119 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  147 (315)
T 2ydy_A          119 PPYREEDIPAPLNLYGKTKLDGEKAVLEN  147 (315)
T ss_dssp             CSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence                  12345678999999999999887

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.76  E-value=1.4e-18  Score=138.92  Aligned_cols=138  Identities=17%  Similarity=0.075  Sum_probs=108.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |++|||||+|+||++++++|+++|++  |++++|++....         ..++.++.+|++|++++.++++       .+
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   64 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHE--VRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK-------DC   64 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEE--EEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT-------TC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCE--EEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc-------CC
Confidence            68999999999999999999999986  999999875421         1346888999999998887765       58


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC--
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~--  186 (214)
                      |+|||||+...               .+.+++.+++|+.++..+++++.+    .+.+      +||++||.......  
T Consensus        65 d~vi~~a~~~~---------------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~------~iv~~SS~~~~~~~~~  119 (267)
T 3ay3_A           65 DGIIHLGGVSV---------------ERPWNDILQANIIGAYNLYEAARN----LGKP------RIVFASSNHTIGYYPR  119 (267)
T ss_dssp             SEEEECCSCCS---------------CCCHHHHHHHTHHHHHHHHHHHHH----TTCC------EEEEEEEGGGSTTSBT
T ss_pred             CEEEECCcCCC---------------CCCHHHHHHHHHHHHHHHHHHHHH----hCCC------EEEEeCCHHHhCCCCC
Confidence            99999998541               134567789999999999998764    2333      99999998654331  


Q ss_pred             -------CCCCCcchhhhhHHHHHHHHHHh
Q 028056          187 -------NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       187 -------~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                             .+..+...|+.+|++++.+++.+
T Consensus       120 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  149 (267)
T 3ay3_A          120 TTRIDTEVPRRPDSLYGLSKCFGEDLASLY  149 (267)
T ss_dssp             TSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence                   11224579999999999999887

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.76  E-value=8.7e-18  Score=140.16  Aligned_cols=152  Identities=15%  Similarity=0.134  Sum_probs=114.1

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCC-CHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT-VESTIEASAKS  100 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~  100 (214)
                      ...+++++||||||+|+||.+++++|+++ |++  |++++|+....+...+     ..++.++.+|++ |.+.+.++++ 
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~-   90 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWE--VFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK-   90 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCE--EEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH-
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCE--EEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc-
Confidence            34567899999999999999999999998 886  9999998866543322     257899999999 9999888876 


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                            .+|+|||+|+...       .    ....++..+.+++|+.++..+++++...    + .      ++|++||.
T Consensus        91 ------~~d~Vih~A~~~~-------~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~------~~v~~SS~  142 (372)
T 3slg_A           91 ------KCDVILPLVAIAT-------P----ATYVKQPLRVFELDFEANLPIVRSAVKY----G-K------HLVFPSTS  142 (372)
T ss_dssp             ------HCSEEEECBCCCC-------H----HHHHHCHHHHHHHHTTTTHHHHHHHHHH----T-C------EEEEECCG
T ss_pred             ------cCCEEEEcCcccc-------H----HHHhhCHHHHHHHHHHHHHHHHHHHHHh----C-C------cEEEeCcH
Confidence                  5799999999753       1    1223455678899999999999987644    2 2      99999996


Q ss_pred             cccCCCC--CC-------------CCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGDN--RL-------------GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~~--~~-------------~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+....  +.             .+...|+.+|.+.+.+++.++
T Consensus       143 ~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~  187 (372)
T 3slg_A          143 EVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYG  187 (372)
T ss_dssp             GGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence            4332210  00             234589999999999999874

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.76  E-value=3.9e-18  Score=132.87  Aligned_cols=139  Identities=16%  Similarity=0.058  Sum_probs=108.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ++++||||+|+||++++++|+++|++  |++++|++++.+..       ..++.++.+|++|.+++.++++       .+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~-------~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFE--VTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVCK-------GA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCE--EEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCE--EEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHhc-------CC
Confidence            68999999999999999999999986  99999987654332       2568899999999999888776       58


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC--
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~--  186 (214)
                      |+||||||...       .      .    .+.+++|+.++..+++++..    .+.+      ++|++||.....+.  
T Consensus        69 d~vi~~a~~~~-------~------~----~~~~~~n~~~~~~l~~~~~~----~~~~------~~v~~Ss~~~~~~~~~  121 (227)
T 3dhn_A           69 DAVISAFNPGW-------N------N----PDIYDETIKVYLTIIDGVKK----AGVN------RFLMVGGAGSLFIAPG  121 (227)
T ss_dssp             SEEEECCCC-----------------------CCSHHHHHHHHHHHHHHH----TTCS------EEEEECCSTTSEEETT
T ss_pred             CEEEEeCcCCC-------C------C----hhHHHHHHHHHHHHHHHHHH----hCCC------EEEEeCChhhccCCCC
Confidence            99999998542       0      0    12688899999888887754    3333      99999998755432  


Q ss_pred             -----CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 -----NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 -----~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                           .+..+...|+.+|.+.+.+.+.++
T Consensus       122 ~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~  150 (227)
T 3dhn_A          122 LRLMDSGEVPENILPGVKALGEFYLNFLM  150 (227)
T ss_dssp             EEGGGTTCSCGGGHHHHHHHHHHHHHTGG
T ss_pred             CccccCCcchHHHHHHHHHHHHHHHHHHh
Confidence                 122346789999999999999886

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.76  E-value=1.3e-17  Score=127.66  Aligned_cols=138  Identities=12%  Similarity=0.097  Sum_probs=103.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +++++||||+|+||++++++|+++|++  |++++|++++.+..      ...++.++.+|++|++++.++++       .
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~--V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~   67 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYE--VTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------G   67 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCe--EEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc-------C
Confidence            478999999999999999999999986  99999987654321      13568899999999998887765       5


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|++|||+|...       .   .  +      ..++|+.++..+++++...    +.+      ++|++||........
T Consensus        68 ~d~vi~~a~~~~-------~---~--~------~~~~n~~~~~~~~~~~~~~----~~~------~~v~~Ss~~~~~~~~  119 (206)
T 1hdo_A           68 QDAVIVLLGTRN-------D---L--S------PTTVMSEGARNIVAAMKAH----GVD------KVVACTSAFLLWDPT  119 (206)
T ss_dssp             CSEEEECCCCTT-------C---C--S------CCCHHHHHHHHHHHHHHHH----TCC------EEEEECCGGGTSCTT
T ss_pred             CCEEEECccCCC-------C---C--C------ccchHHHHHHHHHHHHHHh----CCC------eEEEEeeeeeccCcc
Confidence            799999999653       1   0  1      1247788888887776532    333      999999986544321


Q ss_pred             CCC-CcchhhhhHHHHHHHHHH
Q 028056          188 RLG-GWHSYRASKAALNQCKIL  208 (214)
Q Consensus       188 ~~~-~~~~Y~asKaa~~~~~~~  208 (214)
                      ..+ +...|+.+|.+++.+.+.
T Consensus       120 ~~~~~~~~y~~~K~~~e~~~~~  141 (206)
T 1hdo_A          120 KVPPRLQAVTDDHIRMHKVLRE  141 (206)
T ss_dssp             CSCGGGHHHHHHHHHHHHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHh
Confidence            111 568899999999998864

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.75  E-value=3.1e-18  Score=139.66  Aligned_cols=144  Identities=16%  Similarity=0.104  Sum_probs=107.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |++|||||+|+||.+++++|+++| . .|++..++....+..       ...+.++.+|+++ +++.++++       .+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g-~-~v~~~~~~~~~~~~~-------~~~~~~~~~Dl~~-~~~~~~~~-------~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESN-E-IVVIDNLSSGNEEFV-------NEAARLVKADLAA-DDIKDYLK-------GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTS-C-EEEECCCSSCCGGGS-------CTTEEEECCCTTT-SCCHHHHT-------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCC-C-EEEEEcCCCCChhhc-------CCCcEEEECcCCh-HHHHHHhc-------CC
Confidence            579999999999999999999999 4 355555554432211       3468889999999 77776665       78


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC--
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~--  186 (214)
                      |++||+|+...           .+.+.+++++.+++|+.++..+++++..    .+.+      ++|++||...+...  
T Consensus        65 d~vih~a~~~~-----------~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~------~iv~~SS~~vyg~~~~  123 (313)
T 3ehe_A           65 EEVWHIAANPD-----------VRIGAENPDEIYRNNVLATYRLLEAMRK----AGVS------RIVFTSTSTVYGEAKV  123 (313)
T ss_dssp             SEEEECCCCCC-----------CC-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCC------EEEEECCGGGGCSCSS
T ss_pred             CEEEECCCCCC-----------hhhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCC------eEEEeCchHHhCcCCC
Confidence            99999998542           1334566778899999999999998643    3333      99999997654321  


Q ss_pred             ------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 ------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                            .+..+...|+.+|.+.+.+++.++
T Consensus       124 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  153 (313)
T 3ehe_A          124 IPTPEDYPTHPISLYGASKLACEALIESYC  153 (313)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence                  134556889999999999999884

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.75  E-value=2.8e-18  Score=139.76  Aligned_cols=144  Identities=17%  Similarity=0.126  Sum_probs=110.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      +++|||||+|+||.+++++|+++|++  |++++|+........      ..++.++.+|++|.+ +.+.++       . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~------~~~~~~~~~Dl~d~~-~~~~~~-------~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYE--VVVVDNLSSGRREFV------NPSAELHVRDLKDYS-WGAGIK-------G-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEECCCSSCCGGGS------CTTSEEECCCTTSTT-TTTTCC-------C-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCE--EEEEeCCCCCchhhc------CCCceEEECccccHH-HHhhcC-------C-
Confidence            47999999999999999999999997  999998876543221      356889999999987 654443       3 


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC--
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~--  186 (214)
                      |+|||+|+...           .+.+.+++...+++|+.++..+++++...    +.+      ++|++||...+...  
T Consensus        64 d~vih~A~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~------~iv~~SS~~vyg~~~~  122 (312)
T 3ko8_A           64 DVVFHFAANPE-----------VRLSTTEPIVHFNENVVATFNVLEWARQT----GVR------TVVFASSSTVYGDADV  122 (312)
T ss_dssp             SEEEECCSSCS-----------SSGGGSCHHHHHHHHHHHHHHHHHHHHHH----TCC------EEEEEEEGGGGCSCSS
T ss_pred             CEEEECCCCCC-----------chhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCC------EEEEeCcHHHhCCCCC
Confidence            99999999542           13345567778999999999999988533    332      99999997654321  


Q ss_pred             ------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 ------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                            .+..+...|+.+|.+.+.+++.++
T Consensus       123 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~  152 (312)
T 3ko8_A          123 IPTPEEEPYKPISVYGAAKAAGEVMCATYA  152 (312)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence                  124456899999999999999874

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.75  E-value=9.5e-18  Score=150.95  Aligned_cols=160  Identities=15%  Similarity=0.138  Sum_probs=114.1

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh-cCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .+.+++|+||||||+|+||.+++++|+++|++  |++++|+........+.+. ..+.++.++.+|++|.+++.+++++.
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~   83 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYD--CVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY   83 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCE--EEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC
Confidence            35678899999999999999999999999987  8888887654332211111 11356889999999999988887753


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                           ++|+|||||+...       ...    ..+...+.+++|+.++..+++++..    .+.+      ++|++||..
T Consensus        84 -----~~D~Vih~A~~~~-------~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~------~iV~~SS~~  137 (699)
T 1z45_A           84 -----KIDSVIHFAGLKA-------VGE----STQIPLRYYHNNILGTVVLLELMQQ----YNVS------KFVFSSSAT  137 (699)
T ss_dssp             -----CCCEEEECCSCCC-------HHH----HHHSHHHHHHHHHHHHHHHHHHHHH----HTCC------EEEEEEEGG
T ss_pred             -----CCCEEEECCcccC-------cCc----cccCHHHHHHHHHHHHHHHHHHHHH----cCCC------EEEEECcHH
Confidence                 7999999999653       111    1233456789999999999887643    2333      999999976


Q ss_pred             ccCCC------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGD------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .....            .+..+...|+.+|++++.+++.++
T Consensus       138 vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  178 (699)
T 1z45_A          138 VYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLY  178 (699)
T ss_dssp             GGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHH
Confidence            43210            122345789999999999999874

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.75  E-value=5.6e-18  Score=138.42  Aligned_cols=153  Identities=16%  Similarity=0.099  Sum_probs=104.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec-CCCCcccccch--hhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR-NPNGATGLLDL--KNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r-~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ||++|||||+|+||++++++|+++|++  |++++| +++..+.....  +.....++.++.+|++|+++++++++     
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYS--VNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE-----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT-----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCE--EEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc-----
Confidence            589999999999999999999999997  888888 65332221111  10001257788999999998887775     


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                        .+|+|||+|+...          ...  .+.+++.+++|+.|++.+++++.+..   +.      ++||++||..+..
T Consensus        74 --~~d~vih~A~~~~----------~~~--~~~~~~~~~~nv~gt~~l~~aa~~~~---~~------~~iV~~SS~~~~~  130 (322)
T 2p4h_X           74 --GCVGIFHTASPID----------FAV--SEPEEIVTKRTVDGALGILKACVNSK---TV------KRFIYTSSGSAVS  130 (322)
T ss_dssp             --TCSEEEECCCCC--------------------CHHHHHHHHHHHHHHHHHTTCS---SC------CEEEEEEEGGGTS
T ss_pred             --CCCEEEEcCCccc----------CCC--CChHHHHHHHHHHHHHHHHHHHHhcC---Cc------cEEEEeccHHHcc
Confidence              5799999996321          111  11134578999999999999987541   22      2999999987554


Q ss_pred             CCCCC-------------------CCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRL-------------------GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~-------------------~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +....                   +....|+.+|.+.+.+.+.++
T Consensus       131 ~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~  175 (322)
T 2p4h_X          131 FNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFG  175 (322)
T ss_dssp             CSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHH
Confidence            32100                   011169999999999887763

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.74  E-value=8.1e-18  Score=136.87  Aligned_cols=146  Identities=15%  Similarity=0.051  Sum_probs=112.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~--g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      ++++|||||+|+||.+++++|+++  |++  |++++|+....+    ..    .++.++.+|++|.+++.+++++.    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~----~~----~~~~~~~~D~~d~~~~~~~~~~~----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTEN--VIASDIRKLNTD----VV----NSGPFEVVNALDFNQIEHLVEVH----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGG--EEEEESCCCSCH----HH----HSSCEEECCTTCHHHHHHHHHHT----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCE--EEEEcCCCcccc----cc----CCCceEEecCCCHHHHHHHHhhc----
Confidence            468999999999999999999998  887  888999876521    11    24678999999999998887754    


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                       ++|+|||+|+...       .     ...+++++.+++|+.++..+++++.+    .+.+      ++|++||...+.+
T Consensus        68 -~~d~vih~a~~~~-------~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~------~~v~~SS~~~~~~  124 (312)
T 2yy7_A           68 -KITDIYLMAALLS-------A-----TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIK------KIFWPSSIAVFGP  124 (312)
T ss_dssp             -TCCEEEECCCCCH-------H-----HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCS------EEECCEEGGGCCT
T ss_pred             -CCCEEEECCccCC-------C-----chhhChHHHHHHHHHHHHHHHHHHHH----cCCC------EEEEeccHHHhCC
Confidence             7899999999642       1     12355677899999999999998754    2333      9999999765433


Q ss_pred             CC---------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 DN---------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~~---------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..         +..+...|+.+|.+.+.+++.++
T Consensus       125 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~  158 (312)
T 2yy7_A          125 TTPKENTPQYTIMEPSTVYGISKQAGERWCEYYH  158 (312)
T ss_dssp             TSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCccccCcCCCCchhHHHHHHHHHHHHHHH
Confidence            11         12346789999999999998873

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.74  E-value=2e-17  Score=134.88  Aligned_cols=141  Identities=22%  Similarity=0.220  Sum_probs=109.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~--g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      ++|||||+|+||.+++++|+++  |++  |++++|+....+           ++.++.+|++|.+++.+++++.     .
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~-----~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKN--VIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEKY-----S   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGG--EEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCE--EEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhhc-----C
Confidence            4899999999999999999998  777  888888764421           3568899999999998887753     7


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|+|||+|+...       .     ...+++++.+++|+.++..+++++..    .+.+      ++|++||.....+..
T Consensus        63 ~d~vih~a~~~~-------~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~------~~v~~SS~~~~~~~~  120 (317)
T 3ajr_A           63 IDAIFHLAGILS-------A-----KGEKDPALAYKVNMNGTYNILEAAKQ----HRVE------KVVIPSTIGVFGPET  120 (317)
T ss_dssp             CCEEEECCCCCH-------H-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCC------EEEEEEEGGGCCTTS
T ss_pred             CcEEEECCcccC-------C-----ccccChHHHhhhhhHHHHHHHHHHHH----cCCC------EEEEecCHHHhCCCC
Confidence            999999999642       1     12345677899999999999998754    2333      999999986654311


Q ss_pred             ---------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 ---------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 ---------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                               +..+...|+.+|.+.+.+++.++
T Consensus       121 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~  152 (317)
T 3ajr_A          121 PKNKVPSITITRPRTMFGVTKIAAELLGQYYY  152 (317)
T ss_dssp             CSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCccccccCCCCchHHHHHHHHHHHHHHHH
Confidence                     12246799999999999998773

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.73  E-value=3.2e-18  Score=145.61  Aligned_cols=149  Identities=17%  Similarity=0.095  Sum_probs=109.4

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC---cccccchhh---------cCCCceeEEEecCCCHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG---ATGLLDLKN---------RFPERLDVLQLDLTVEST   93 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~---~~~~~~~~~---------~~~~~~~~~~~Dl~~~~~   93 (214)
                      ..+++||||||+|+||.+++++|++.|++  |++++|++..   .+.+.+.+.         ..+.++.++.+|++|+++
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHR--IYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEE--EEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCE--EEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            45689999999999999999999999987  9999998873   222222221         123579999999999887


Q ss_pred             HHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceE
Q 028056           94 IEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAV  173 (214)
Q Consensus        94 v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~  173 (214)
                      +.        ...++|+|||||+...              ..+.+.+.+++|+.++..+++++.+     +..      +
T Consensus       145 l~--------~~~~~d~Vih~A~~~~--------------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~------~  191 (427)
T 4f6c_A          145 VV--------LPENMDTIIHAGARTD--------------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHA------R  191 (427)
T ss_dssp             CC--------CSSCCSEEEECCCCC---------------------CHHHHHHHHHHHHHHHHHH-----TTC------E
T ss_pred             CC--------CcCCCCEEEECCcccC--------------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCC------c
Confidence            76        4568999999999653              1245677899999999999999876     122      9


Q ss_pred             EEEeecCcccCCC--------------C---CCCCcchhhhhHHHHHHHHHHhcc
Q 028056          174 VANLSARVGSIGD--------------N---RLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       174 iv~iss~~~~~~~--------------~---~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      +|++||...  +.              .   +......|+.+|.+.+.+++.+++
T Consensus       192 ~v~~SS~~~--G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  244 (427)
T 4f6c_A          192 LIYVSTISV--GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN  244 (427)
T ss_dssp             EEEEEEGGG--GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECchHh--CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH
Confidence            999999876  11              0   123678999999999999998754

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.73  E-value=2.8e-17  Score=132.68  Aligned_cols=133  Identities=24%  Similarity=0.241  Sum_probs=107.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      -+++|||||+|+||++++++|+++|++  |++++|+                     .+|++|.+++.+++++.     +
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~---------------------~~Dl~d~~~~~~~~~~~-----~   63 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVE--VIPTDVQ---------------------DLDITNVLAVNKFFNEK-----K   63 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEE--EEEECTT---------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCe--EEeccCc---------------------cCCCCCHHHHHHHHHhc-----C
Confidence            479999999999999999999999986  8888885                     27999999998888765     7


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|+|||||+...           .+...+++.+.+++|+.++..+++++.+.    +       .++|++||...+.+..
T Consensus        64 ~d~vih~A~~~~-----------~~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-------~~iv~~SS~~v~~~~~  121 (292)
T 1vl0_A           64 PNVVINCAAHTA-----------VDKCEEQYDLAYKINAIGPKNLAAAAYSV----G-------AEIVQISTDYVFDGEA  121 (292)
T ss_dssp             CSEEEECCCCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH----T-------CEEEEEEEGGGSCSCC
T ss_pred             CCEEEECCccCC-----------HHHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEechHHeECCCC
Confidence            899999999642           12345677889999999999999998653    1       1899999976543321


Q ss_pred             --------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 --------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 --------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                              +..+...|+.+|.+.+.+++.++
T Consensus       122 ~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~  152 (292)
T 1vl0_A          122 KEPITEFDEVNPQSAYGKTKLEGENFVKALN  152 (292)
T ss_dssp             SSCBCTTSCCCCCSHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCCccHHHHHHHHHHHHHHhhC
Confidence                    12245789999999999999874

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.72  E-value=6e-17  Score=129.30  Aligned_cols=135  Identities=20%  Similarity=0.189  Sum_probs=106.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++||||+|+||++++++|++ |++  |++++|++.. +         . +   +.+|++|++++.++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~--V~~~~r~~~~-~---------~-~---~~~Dl~~~~~~~~~~~~~-----~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHE--VIKVYNSSEI-Q---------G-G---YKLDLTDFPRLEDFIIKK-----RPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSC--EEEEESSSCC-T---------T-C---EECCTTSHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCe--EEEecCCCcC-C---------C-C---ceeccCCHHHHHHHHHhc-----CCC
Confidence            589999999999999999995 876  9999998742 1         1 1   789999999999888865     799


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC--
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN--  187 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~--  187 (214)
                      +||||||...           .+.+.+++++.+++|+.++..+++++.+    .+       +++|++||.....+..  
T Consensus        60 ~vi~~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-------~~iv~~SS~~~~~~~~~~  117 (273)
T 2ggs_A           60 VIINAAAMTD-----------VDKCEIEKEKAYKINAEAVRHIVRAGKV----ID-------SYIVHISTDYVFDGEKGN  117 (273)
T ss_dssp             EEEECCCCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-------CEEEEEEEGGGSCSSSCS
T ss_pred             EEEECCcccC-----------hhhhhhCHHHHHHHhHHHHHHHHHHHHH----hC-------CeEEEEecceeEcCCCCC
Confidence            9999999653           1234567888999999999999998854    22       2899999987654421  


Q ss_pred             -----CCCCcchhhhhHHHHHHHHHH
Q 028056          188 -----RLGGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       188 -----~~~~~~~Y~asKaa~~~~~~~  208 (214)
                           +..+...|+.+|++++.+++.
T Consensus       118 ~~e~~~~~~~~~Y~~sK~~~e~~~~~  143 (273)
T 2ggs_A          118 YKEEDIPNPINYYGLSKLLGETFALQ  143 (273)
T ss_dssp             BCTTSCCCCSSHHHHHHHHHHHHHCC
T ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHhC
Confidence                 112357999999999998865

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.72  E-value=3e-18  Score=132.29  Aligned_cols=134  Identities=21%  Similarity=0.088  Sum_probs=105.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCC--CcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKND--KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~--~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++++||||+|+||.+++++|+++|.  +  |++++|++..          ...++.++.+|++|.+++.+++      
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~--V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAK--VIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCE--EECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCe--EEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh------
Confidence            467999999999999999999999998  6  9999998764          1246778889998887665443      


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                         +|++|||+|...             ...+.+++.+++|+.++..+++++.+.    +.+      ++|++||.....
T Consensus        66 ---~d~vi~~a~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~------~~v~~Ss~~~~~  119 (215)
T 2a35_A           66 ---IDTAFCCLGTTI-------------KEAGSEEAFRAVDFDLPLAVGKRALEM----GAR------HYLVVSALGADA  119 (215)
T ss_dssp             ---CSEEEECCCCCH-------------HHHSSHHHHHHHHTHHHHHHHHHHHHT----TCC------EEEEECCTTCCT
T ss_pred             ---hcEEEECeeecc-------------ccCCCHHHHHHhhHHHHHHHHHHHHHc----CCC------EEEEECCcccCC
Confidence               899999999642             123456778889999999999987542    332      899999976643


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      .     +...|+.+|++++.+++.+
T Consensus       120 ~-----~~~~y~~sK~~~e~~~~~~  139 (215)
T 2a35_A          120 K-----SSIFYNRVKGELEQALQEQ  139 (215)
T ss_dssp             T-----CSSHHHHHHHHHHHHHTTS
T ss_pred             C-----CccHHHHHHHHHHHHHHHc
Confidence            2     3458999999999998764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.71  E-value=3.1e-17  Score=141.66  Aligned_cols=156  Identities=17%  Similarity=0.135  Sum_probs=112.4

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhc---CCCcEEEEeecCCCCccc---ccchhhc------------CCCceeE
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEK---NDKGCVIATCRNPNGATG---LLDLKNR------------FPERLDV   83 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~---g~~~~vi~~~r~~~~~~~---~~~~~~~------------~~~~~~~   83 (214)
                      +....++++||||||+|+||.+++++|++.   |++  |++++|++...+.   +.+....            ...++.+
T Consensus        67 ~~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~--V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~  144 (478)
T 4dqv_A           67 PGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGR--LICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEV  144 (478)
T ss_dssp             CCCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCE--EEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEE
T ss_pred             CCCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCE--EEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEE
Confidence            335567899999999999999999999999   776  9999998764322   1111111            2357999


Q ss_pred             EEecCC------CHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHh
Q 028056           84 LQLDLT------VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMS  157 (214)
Q Consensus        84 ~~~Dl~------~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  157 (214)
                      +.+|++      |.+.+.++++       ++|+|||||+...       .        +.+.+.+++|+.++..+++++.
T Consensus       145 v~~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~-------~--------~~~~~~~~~Nv~gt~~ll~aa~  202 (478)
T 4dqv_A          145 VAGDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVN-------A--------FPYHELFGPNVAGTAELIRIAL  202 (478)
T ss_dssp             EECCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCS-------B--------SSCCEEHHHHHHHHHHHHHHHT
T ss_pred             EEeECCCcccCCCHHHHHHHHc-------CCCEEEECccccC-------C--------cCHHHHHHHHHHHHHHHHHHHH
Confidence            999999      5556666555       5799999999753       1        3455678899999999999875


Q ss_pred             hHHhcCCCCCCCCceEEEEeecCcccCCCCCC-------------------CCcchhhhhHHHHHHHHHHhcc
Q 028056          158 PLLKVGGTGIERDVAVVANLSARVGSIGDNRL-------------------GGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       158 ~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~-------------------~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      .    .+..      ++|++||........+.                   .....|+.+|.+.+.+++.+++
T Consensus       203 ~----~~~~------~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  265 (478)
T 4dqv_A          203 T----TKLK------PFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREAND  265 (478)
T ss_dssp             S----SSCC------CEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHH
T ss_pred             h----CCCC------eEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHH
Confidence            3    2322      89999996543221000                   1124499999999999998843

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.71  E-value=4.1e-18  Score=140.33  Aligned_cols=152  Identities=17%  Similarity=0.103  Sum_probs=104.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccc--hhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +|++|||||+|+||++++++|+++|++  |+++.|+.+..+....  .+. ...++.++.+|++|.+++.++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYA--VNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCE--EEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCE--EEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc------
Confidence            689999999999999999999999997  8888887765332211  111 12468889999999988877665      


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                       .+|+|||+|+...       .   ..  .+..++.+++|+.|+..+++++.+..   +.+      +||++||..++.+
T Consensus        80 -~~D~Vih~A~~~~-------~---~~--~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~------r~V~~SS~~~~~~  137 (338)
T 2rh8_A           80 -GCDFVFHVATPVH-------F---AS--EDPENDMIKPAIQGVVNVMKACTRAK---SVK------RVILTSSAAAVTI  137 (338)
T ss_dssp             -TCSEEEEESSCCC-------C--------------CHHHHHHHHHHHHHHHHCT---TCC------EEEEECCHHHHHH
T ss_pred             -CCCEEEEeCCccC-------C---CC--CCcHHHHHHHHHHHHHHHHHHHHHcC---CcC------EEEEEecHHHeec
Confidence             5799999998532       1   11  11123478999999999999886542   122      9999999763211


Q ss_pred             C-----------C---------CC-CCcchhhhhHHHHHHHHHHhc
Q 028056          186 D-----------N---------RL-GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~-----------~---------~~-~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .           .         +. +....|+.+|.+.+.+.+.++
T Consensus       138 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  183 (338)
T 2rh8_A          138 NQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFA  183 (338)
T ss_dssp             HHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHH
T ss_pred             CCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHH
Confidence            0           0         00 011269999999999888763

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.71  E-value=3.1e-17  Score=136.15  Aligned_cols=151  Identities=13%  Similarity=0.106  Sum_probs=108.4

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++++++|||||+|+||.+++++|+++| ++  |++++|+..... ... ..    ++. +.+|++|.+.++++++.  .
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~--V~~~~r~~~~~~-~~~-~~----~~~-~~~d~~~~~~~~~~~~~--~  111 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITD--ILVVDNLKDGTK-FVN-LV----DLN-IADYMDKEDFLIQIMAG--E  111 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCC--EEEEECCSSGGG-GGG-TT----TSC-CSEEEEHHHHHHHHHTT--C
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcE--EEEEecCCCcch-hhc-cc----Cce-EeeecCcHHHHHHHHhh--c
Confidence            4678999999999999999999999999 76  888888765421 111 11    222 67899999888777653  1


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .++++|+|||+|+...       .      +.+++++.+++|+.++..+++++.+.    +      . ++|++||...+
T Consensus       112 ~~~~~d~Vih~A~~~~-------~------~~~~~~~~~~~n~~~~~~ll~a~~~~----~------~-r~V~~SS~~v~  167 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSS-------T------TEWDGKYMMDNNYQYSKELLHYCLER----E------I-PFLYASSAATY  167 (357)
T ss_dssp             CCSSCCEEEECCSCCC-------T------TCCCHHHHHHHTHHHHHHHHHHHHHH----T------C-CEEEEEEGGGG
T ss_pred             ccCCCCEEEECCcccC-------C------ccCCHHHHHHHHHHHHHHHHHHHHHc----C------C-eEEEEcchHHh
Confidence            2457999999999653       1      23456778899999999999988752    1      1 79999998654


Q ss_pred             CCCC--------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDN--------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~--------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ....        +..+...|+.+|.+.+.+++.++
T Consensus       168 g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  202 (357)
T 2x6t_A          168 GGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQIL  202 (357)
T ss_dssp             CSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHG
T ss_pred             CCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHH
Confidence            3211        11235789999999999999884

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.70  E-value=1.4e-16  Score=131.18  Aligned_cols=146  Identities=14%  Similarity=0.086  Sum_probs=107.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCH-HHHHHHHHHHHHHcC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE-STIEASAKSIKEKYG  106 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~  106 (214)
                      +++|||||+|+||.+++++|+++ |++  |++++|+....+...     ...++.++.+|++|. +.++++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYE--VYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCE--EEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCE--EEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc-------
Confidence            47999999999999999999998 776  999999876543221     134688999999984 55666654       


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      .+|+|||+|+...       .    ....+++.+.+++|+.++..+++++...    + .      ++|++||...+...
T Consensus        67 ~~d~vih~A~~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~------~~v~~SS~~v~g~~  124 (345)
T 2bll_A           67 KCDVVLPLVAIAT-------P----IEYTRNPLRVFELDFEENLRIIRYCVKY----R-K------RIIFPSTSEVYGMC  124 (345)
T ss_dssp             HCSEEEECBCCCC-------H----HHHHHSHHHHHHHHTHHHHHHHHHHHHT----T-C------EEEEECCGGGGBTC
T ss_pred             CCCEEEEcccccC-------c----cchhcCHHHHHHHHHHHHHHHHHHHHHh----C-C------eEEEEecHHHcCCC
Confidence            4799999999653       1    1123456678899999999999887542    2 2      99999997543221


Q ss_pred             C--CC-------------CCcchhhhhHHHHHHHHHHhc
Q 028056          187 N--RL-------------GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~--~~-------------~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .  +.             .+...|+.+|.+.+.+++.++
T Consensus       125 ~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  163 (345)
T 2bll_A          125 SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYG  163 (345)
T ss_dssp             CCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHH
Confidence            0  00             123489999999999998874

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.70  E-value=1.5e-16  Score=129.70  Aligned_cols=139  Identities=9%  Similarity=0.021  Sum_probs=106.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      ++++|||||+|+||.+++++|+++|++  |++++|++...+ +        .++.++.+|++ .+++.++++       .
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~-~--------~~~~~~~~Dl~-~~~~~~~~~-------~   62 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNT--PIILTRSIGNKA-I--------NDYEYRVSDYT-LEDLINQLN-------D   62 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCCC--------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCE--EEEEeCCCCccc-C--------CceEEEEcccc-HHHHHHhhc-------C
Confidence            368999999999999999999999997  999999843322 1        16889999999 888777665       7


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC-
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-  186 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-  186 (214)
                      +|+|||+|+...       ..        ++.+.+++|+.++..+++++..    .+..      ++|++||...+... 
T Consensus        63 ~d~Vih~a~~~~-------~~--------~~~~~~~~n~~~~~~ll~a~~~----~~~~------r~v~~SS~~vyg~~~  117 (311)
T 3m2p_A           63 VDAVVHLAATRG-------SQ--------GKISEFHDNEILTQNLYDACYE----NNIS------NIVYASTISAYSDET  117 (311)
T ss_dssp             CSEEEECCCCCC-------SS--------SCGGGTHHHHHHHHHHHHHHHH----TTCC------EEEEEEEGGGCCCGG
T ss_pred             CCEEEEccccCC-------CC--------ChHHHHHHHHHHHHHHHHHHHH----cCCC------EEEEEccHHHhCCCC
Confidence            899999999764       11        3455788999999999888753    3332      89999996543321 


Q ss_pred             -------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 -------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 -------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                             .+..+...|+.+|.+.+.+++.++
T Consensus       118 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  148 (311)
T 3m2p_A          118 SLPWNEKELPLPDLMYGVSKLACEHIGNIYS  148 (311)
T ss_dssp             GCSBCTTSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Confidence                   123345799999999999999874

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.70  E-value=1.6e-16  Score=131.19  Aligned_cols=149  Identities=13%  Similarity=0.116  Sum_probs=106.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ..++++++|||||+|+||.+++++|+++|++  |++++|+...... +....  ...++.++.+|+.+..          
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~----------   88 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHE--VTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPL----------   88 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCC----------
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCE--EEEEeCCCccchhhhhhhc--cCCceEEEeCccCChh----------
Confidence            4467899999999999999999999999987  8889987654322 22211  1346889999998752          


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                        +..+|+|||+|+...       ..    ...+++++.+++|+.++..+++++...    +       .++|++||...
T Consensus        89 --~~~~d~vih~A~~~~-------~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-------~~~v~~SS~~v  144 (343)
T 2b69_A           89 --YIEVDQIYHLASPAS-------PP----NYMYNPIKTLKTNTIGTLNMLGLAKRV----G-------ARLLLASTSEV  144 (343)
T ss_dssp             --CCCCSEEEECCSCCS-------HH----HHTTCHHHHHHHHHHHHHHHHHHHHHH----T-------CEEEEEEEGGG
T ss_pred             --hcCCCEEEECccccC-------ch----hhhhCHHHHHHHHHHHHHHHHHHHHHh----C-------CcEEEECcHHH
Confidence              357999999999653       11    112345677899999999999988643    1       18999999754


Q ss_pred             cCCC-------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGD-------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~-------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +...             .+..+...|+.+|++.+.+++.++
T Consensus       145 ~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  185 (343)
T 2b69_A          145 YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYM  185 (343)
T ss_dssp             GBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHH
Confidence            3211             123445789999999999998874

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.70  E-value=6.9e-17  Score=130.06  Aligned_cols=131  Identities=21%  Similarity=0.224  Sum_probs=105.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      ++|||||+|+||.+++++|+++|++  |++++|.                     ++|++|.+++.+++++.     ++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~---------------------~~D~~d~~~~~~~~~~~-----~~d   58 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYD--IYPFDKK---------------------LLDITNISQVQQVVQEI-----RPH   58 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEE--EEEECTT---------------------TSCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCE--EEEeccc---------------------ccCCCCHHHHHHHHHhc-----CCC
Confidence            8999999999999999999999986  9988882                     27999999999888876     789


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC---
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD---  186 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~---  186 (214)
                      +|||+|+...           .+...+++.+.+++|+.++..+++++...    +       .++|++||...+.+.   
T Consensus        59 ~vi~~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-------~~~v~~SS~~vy~~~~~~  116 (287)
T 3sc6_A           59 IIIHCAAYTK-----------VDQAEKERDLAYVINAIGARNVAVASQLV----G-------AKLVYISTDYVFQGDRPE  116 (287)
T ss_dssp             EEEECCCCCC-----------HHHHTTCHHHHHHHHTHHHHHHHHHHHHH----T-------CEEEEEEEGGGSCCCCSS
T ss_pred             EEEECCcccC-----------hHHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEchhhhcCCCCCC
Confidence            9999999753           12233567788999999999999988543    2       279999997654331   


Q ss_pred             -----CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 -----NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 -----~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                           .+..+...|+.+|.+.+.+++.++
T Consensus       117 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  145 (287)
T 3sc6_A          117 GYDEFHNPAPINIYGASKYAGEQFVKELH  145 (287)
T ss_dssp             CBCTTSCCCCCSHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence                 123446799999999999999874

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.69  E-value=2.6e-16  Score=128.53  Aligned_cols=137  Identities=12%  Similarity=-0.024  Sum_probs=104.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .++++|||||+|+||.+++++|+++|++  |++++|+.                    .+|++|.+++.+++++.     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~--v~~~~r~~--------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDV--ELVLRTRD--------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTE--EEECCCTT--------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCe--EEEEecCc--------------------cCCccCHHHHHHHHHhc-----
Confidence            3578999999999999999999999987  77777652                    26999999998888765     


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      .+|+|||+|+...       .   .+...+++.+.+++|+.++..+++++...    +..      ++|++||...+...
T Consensus        55 ~~d~vih~a~~~~-------~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~------~~v~~SS~~vyg~~  114 (321)
T 1e6u_A           55 RIDQVYLAAAKVG-------G---IVANNTYPADFIYQNMMIESNIIHAAHQN----DVN------KLLFLGSSCIYPKL  114 (321)
T ss_dssp             CCSEEEECCCCCC-------C---HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCC------EEEEECCGGGSCTT
T ss_pred             CCCEEEEcCeecC-------C---cchhhhCHHHHHHHHHHHHHHHHHHHHHh----CCC------eEEEEccHHHcCCC
Confidence            7999999998642       1   12234456678899999999999987542    222      99999997654321


Q ss_pred             C------------CC-CCcchhhhhHHHHHHHHHHhc
Q 028056          187 N------------RL-GGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ~------------~~-~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .            +. +....|+.+|.+.+.+++.++
T Consensus       115 ~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~  151 (321)
T 1e6u_A          115 AKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYN  151 (321)
T ss_dssp             CCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            0            11 223589999999999998873

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.67  E-value=5.6e-16  Score=138.64  Aligned_cols=149  Identities=14%  Similarity=0.091  Sum_probs=110.4

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHH-HHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVEST-IEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~  103 (214)
                      +++++++||||+|+||.+++++|+++ |++  |++++|+....+...     ...++.++.+|++|.++ ++++++    
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~--V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~----  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYE--VYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK----  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEE--EEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH----
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCE--EEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc----
Confidence            46799999999999999999999998 776  999999876543321     13468899999999765 555554    


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                         .+|+|||+|+...       .    ....+++.+.+++|+.++..+++++...    + +      ++|++||...+
T Consensus       382 ---~~D~Vih~Aa~~~-------~----~~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-~------r~V~~SS~~vy  436 (660)
T 1z7e_A          382 ---KCDVVLPLVAIAT-------P----IEYTRNPLRVFELDFEENLRIIRYCVKY----R-K------RIIFPSTSEVY  436 (660)
T ss_dssp             ---HCSEEEECCCCCC-------T----HHHHHSHHHHHHHHTHHHHHHHHHHHHT----T-C------EEEEECCGGGG
T ss_pred             ---CCCEEEECceecC-------c----cccccCHHHHHHhhhHHHHHHHHHHHHh----C-C------EEEEEecHHHc
Confidence               5799999999653       1    1123456778999999999999887643    2 2      99999997654


Q ss_pred             CCCC--C-------------CCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDN--R-------------LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~--~-------------~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ....  +             ..+...|+.+|.+.+.+++.++
T Consensus       437 g~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~  478 (660)
T 1z7e_A          437 GMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYG  478 (660)
T ss_dssp             BTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHH
Confidence            2210  0             0223479999999999998874

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.67  E-value=6.6e-16  Score=121.25  Aligned_cols=110  Identities=12%  Similarity=0.025  Sum_probs=84.9

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +..|++|||||+|+||++++++|+++| ++  |++++|++++++...      ..++.++++|++|+++++++++     
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~--V~~~~R~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~-----   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIK--QTLFARQPAKIHKPY------PTNSQIIMGDVLNHAALKQAMQ-----   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEE--EEEEESSGGGSCSSC------CTTEEEEECCTTCHHHHHHHHT-----
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCce--EEEEEcChhhhcccc------cCCcEEEEecCCCHHHHHHHhc-----
Confidence            446899999999999999999999999 65  999999886644321      3468899999999999988776     


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                        .+|+||||++...                             ....++.+++.+++.+.+      +||++||.....
T Consensus        88 --~~D~vv~~a~~~~-----------------------------~~~~~~~~~~~~~~~~~~------~iV~iSS~~~~~  130 (236)
T 3qvo_A           88 --GQDIVYANLTGED-----------------------------LDIQANSVIAAMKACDVK------RLIFVLSLGIYD  130 (236)
T ss_dssp             --TCSEEEEECCSTT-----------------------------HHHHHHHHHHHHHHTTCC------EEEEECCCCC--
T ss_pred             --CCCEEEEcCCCCc-----------------------------hhHHHHHHHHHHHHcCCC------EEEEEecceecC
Confidence              6799999998421                             012356778888877665      999999987655


Q ss_pred             C
Q 028056          185 G  185 (214)
Q Consensus       185 ~  185 (214)
                      +
T Consensus       131 ~  131 (236)
T 3qvo_A          131 E  131 (236)
T ss_dssp             -
T ss_pred             C
Confidence            4

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.66  E-value=2e-16  Score=128.38  Aligned_cols=143  Identities=12%  Similarity=0.000  Sum_probs=103.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ..+++++||||||+|+||.+++++|+++|..        ....           ...+..+.+|++|.+++.++++..  
T Consensus         2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--------~~~~-----------~~~~~~~~~D~~d~~~~~~~~~~~--   60 (319)
T 4b8w_A            2 LYFQSMRILVTGGSGLVGKAIQKVVADGAGL--------PGED-----------WVFVSSKDADLTDTAQTRALFEKV--   60 (319)
T ss_dssp             CCCCCCEEEEETCSSHHHHHHHHHHHTTTCC--------TTCE-----------EEECCTTTCCTTSHHHHHHHHHHS--
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhcCCc--------cccc-----------ccccCceecccCCHHHHHHHHhhc--
Confidence            3467899999999999999999999999871        1100           112445578999999998888753  


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                         ++|+|||+|+...          ......++..+.+++|+.++..+++++...    +..      ++|++||...+
T Consensus        61 ---~~d~Vih~A~~~~----------~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~------~~v~~SS~~vy  117 (319)
T 4b8w_A           61 ---QPTHVIHLAAMVG----------GLFRNIKYNLDFWRKNVHMNDNVLHSAFEV----GAR------KVVSCLSTCIF  117 (319)
T ss_dssp             ---CCSEEEECCCCCC----------CHHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCS------EEEEECCGGGS
T ss_pred             ---CCCEEEECceecc----------cccccccCHHHHHHHHHHHHHHHHHHHHHc----CCC------eEEEEcchhhc
Confidence               6999999999642          112233455677899999999999987533    332      89999998544


Q ss_pred             CCC-------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGD-------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~-------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ...             .+.+....|+.+|.+.+.+++.++
T Consensus       118 g~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~  157 (319)
T 4b8w_A          118 PDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYF  157 (319)
T ss_dssp             CSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHH
Confidence            321             111222369999999999998763

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.65  E-value=5.2e-16  Score=125.49  Aligned_cols=134  Identities=18%  Similarity=0.158  Sum_probs=104.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++||||+|+||.+++++|+ +|++  |++++|++.                 .+.+|++|.+++.++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~--V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~-----~~d   56 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGN--LIALDVHSK-----------------EFCGDFSNPKGVAETVRKL-----RPD   56 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSE--EEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCe--EEEeccccc-----------------cccccCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999 8886  988888761                 3468999999998888764     689


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC---
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD---  186 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~---  186 (214)
                      +|||+|+...           .+...+++++.+++|+.++..+++++..    .+       .++|++||...+.+.   
T Consensus        57 ~vih~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-------~~~v~~SS~~vy~~~~~~  114 (299)
T 1n2s_A           57 VIVNAAAHTA-----------VDKAESEPELAQLLNATSVEAIAKAANE----TG-------AWVVHYSTDYVFPGTGDI  114 (299)
T ss_dssp             EEEECCCCCC-----------HHHHTTCHHHHHHHHTHHHHHHHHHHTT----TT-------CEEEEEEEGGGSCCCTTC
T ss_pred             EEEECcccCC-----------HhhhhcCHHHHHHHHHHHHHHHHHHHHH----cC-------CcEEEEecccEEeCCCCC
Confidence            9999999643           1123345677889999999999998743    22       289999997654321   


Q ss_pred             -----CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 -----NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 -----~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                           .+..+...|+.+|.+.+.+++.++
T Consensus       115 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  143 (299)
T 1n2s_A          115 PWQETDATSPLNVYGKTKLAGEKALQDNC  143 (299)
T ss_dssp             CBCTTSCCCCSSHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHhC
Confidence                 122335789999999999998764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.65  E-value=6.8e-16  Score=119.77  Aligned_cols=132  Identities=12%  Similarity=0.100  Sum_probs=94.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++||||||+||++++++|+++|++  |++++|++++.+.+      ...++.++.+|++|+++         +.+..+|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~------~~~~~~~~~~D~~d~~~---------~~~~~~d   64 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHE--VLAVVRDPQKAADR------LGATVATLVKEPLVLTE---------ADLDSVD   64 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH------TCTTSEEEECCGGGCCH---------HHHTTCS
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCE--EEEEEecccccccc------cCCCceEEecccccccH---------hhcccCC
Confidence            5999999999999999999999997  99999987553322      13478899999999887         2235789


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC-
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR-  188 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~-  188 (214)
                      +||||||...      ...            ...+|+.++..++    +.+++.+ +      ++|++||..+..+... 
T Consensus        65 ~vi~~ag~~~------~~~------------~~~~n~~~~~~l~----~a~~~~~-~------~~v~~SS~~~~~~~~~~  115 (224)
T 3h2s_A           65 AVVDALSVPW------GSG------------RGYLHLDFATHLV----SLLRNSD-T------LAVFILGSASLAMPGAD  115 (224)
T ss_dssp             EEEECCCCCT------TSS------------CTHHHHHHHHHHH----HTCTTCC-C------EEEEECCGGGSBCTTCS
T ss_pred             EEEECCccCC------Ccc------------hhhHHHHHHHHHH----HHHHHcC-C------cEEEEecceeeccCCCC
Confidence            9999999642      000            1234666654444    4455555 4      9999999876554211 


Q ss_pred             ----------CCCcchhhhhHHHHHHHHH
Q 028056          189 ----------LGGWHSYRASKAALNQCKI  207 (214)
Q Consensus       189 ----------~~~~~~Y~asKaa~~~~~~  207 (214)
                                ..+...|+.+|++.+.+..
T Consensus       116 ~~~~~~~~~~~~~~~~y~~sK~~~e~~~~  144 (224)
T 3h2s_A          116 HPMILDFPESAASQPWYDGALYQYYEYQF  144 (224)
T ss_dssp             SCGGGGCCGGGGGSTTHHHHHHHHHHHHH
T ss_pred             ccccccCCCCCccchhhHHHHHHHHHHHH
Confidence                      0116789999999996643

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.64  E-value=5.2e-16  Score=126.42  Aligned_cols=143  Identities=16%  Similarity=0.050  Sum_probs=101.4

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC----cccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG----ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ++++++||||||||+||.+++++|+++|++  |++++|+...    .+.+.+..  ...++.++.+|++           
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~-----------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEE--VTVLDDLRVPPMIPPEGTGKFL--EKPVLELEERDLS-----------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCC--EEEECCCSSCCSSCCTTSSEEE--CSCGGGCCHHHHT-----------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCE--EEEEecCCcccccchhhhhhhc--cCCCeeEEeCccc-----------
Confidence            356789999999999999999999999998  9999998762    22222211  1245677777776           


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                            .+|+|||+|+...       .    +...+.....++ |+.++..+++++...    +..      ++|++||.
T Consensus        69 ------~~d~vi~~a~~~~-------~----~~~~~~~~~~~~-n~~~~~~ll~a~~~~----~v~------~~v~~SS~  120 (321)
T 3vps_A           69 ------DVRLVYHLASHKS-------V----PRSFKQPLDYLD-NVDSGRHLLALCTSV----GVP------KVVVGSTC  120 (321)
T ss_dssp             ------TEEEEEECCCCCC-------H----HHHTTSTTTTHH-HHHHHHHHHHHHHHH----TCC------EEEEEEEG
T ss_pred             ------cCCEEEECCccCC-------h----HHHHhCHHHHHH-HHHHHHHHHHHHHHc----CCC------eEEEecCH
Confidence                  7899999999753       1    112233344566 999999999987544    222      99999997


Q ss_pred             cccCCC--------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGD--------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~--------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+...        .+..+...|+.+|.+.+.+++.++
T Consensus       121 ~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  158 (321)
T 3vps_A          121 EVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQ  158 (321)
T ss_dssp             GGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHH
Confidence            654321        123446789999999999999874

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.64  E-value=1.1e-15  Score=118.15  Aligned_cols=129  Identities=18%  Similarity=0.186  Sum_probs=90.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++||||+|+||++++++|+++|++  |++++|++++.+.+.       .++.++.+|++|+++         +.+..+|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~---------~~~~~~d   63 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHE--VTAIVRNAGKITQTH-------KDINILQKDIFDLTL---------SDLSDQN   63 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCSHHHHHHC-------SSSEEEECCGGGCCH---------HHHTTCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCE--EEEEEcCchhhhhcc-------CCCeEEeccccChhh---------hhhcCCC
Confidence            5999999999999999999999987  999999876533221       468899999999887         2235789


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC--
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN--  187 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~--  187 (214)
                      +||||||...       .             ....|+.++    +.+++.+++.+.+      ++|++||..++.+..  
T Consensus        64 ~vi~~ag~~~-------~-------------~~~~~~~~~----~~l~~a~~~~~~~------~~v~~SS~~~~~~~~~~  113 (221)
T 3ew7_A           64 VVVDAYGISP-------D-------------EAEKHVTSL----DHLISVLNGTVSP------RLLVVGGAASLQIDEDG  113 (221)
T ss_dssp             EEEECCCSST-------T-------------TTTSHHHHH----HHHHHHHCSCCSS------EEEEECCCC--------
T ss_pred             EEEECCcCCc-------c-------------ccchHHHHH----HHHHHHHHhcCCc------eEEEEecceEEEcCCCC
Confidence            9999999642       1             123344554    4555555665544      999999987765421  


Q ss_pred             -------CCCCcchhhhhHHHHHHHH
Q 028056          188 -------RLGGWHSYRASKAALNQCK  206 (214)
Q Consensus       188 -------~~~~~~~Y~asKaa~~~~~  206 (214)
                             +..+...|+.+|.+.+.+.
T Consensus       114 ~~~~~~~~~~~~~~y~~~k~~~e~~~  139 (221)
T 3ew7_A          114 NTLLESKGLREAPYYPTARAQAKQLE  139 (221)
T ss_dssp             -----------CCCSCCHHHHHHHHH
T ss_pred             ccccccCCCCCHHHHHHHHHHHHHHH
Confidence                   1123466999999999873

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.64  E-value=5.3e-16  Score=124.93  Aligned_cols=136  Identities=14%  Similarity=0.034  Sum_probs=102.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +++++|||| +|+||.+++++|+++|++  |++++|+.+..          ..++.++.+|++|.+++.++++      +
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~--V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~------~   62 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHE--VTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH------L   62 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCC--EEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG------G
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCE--EEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc------C
Confidence            457899999 599999999999999998  99999987652          2568899999999998877665      3


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ++|+|||+|+...                .+....+++|+.++..+++++.    +.+.+      ++|++||...+...
T Consensus        63 ~~d~vih~a~~~~----------------~~~~~~~~~n~~~~~~ll~a~~----~~~~~------~~v~~SS~~vyg~~  116 (286)
T 3gpi_A           63 RPEILVYCVAASE----------------YSDEHYRLSYVEGLRNTLSALE----GAPLQ------HVFFVSSTGVYGQE  116 (286)
T ss_dssp             CCSEEEECHHHHH----------------HC-----CCSHHHHHHHHHHTT----TSCCC------EEEEEEEGGGCCCC
T ss_pred             CCCEEEEeCCCCC----------------CCHHHHHHHHHHHHHHHHHHHh----hCCCC------EEEEEcccEEEcCC
Confidence            6999999998431                3446678999999999999875    33333      99999997543321


Q ss_pred             --------CCCCCcchhhhhHHHHHHHHHH
Q 028056          187 --------NRLGGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       187 --------~~~~~~~~Y~asKaa~~~~~~~  208 (214)
                              .+..+...|+.+|.+.+.+ +.
T Consensus       117 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~  145 (286)
T 3gpi_A          117 VEEWLDEDTPPIAKDFSGKRMLEAEAL-LA  145 (286)
T ss_dssp             CSSEECTTSCCCCCSHHHHHHHHHHHH-GG
T ss_pred             CCCCCCCCCCCCCCChhhHHHHHHHHH-Hh
Confidence                    1233467999999999988 54

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.60  E-value=3.6e-15  Score=120.97  Aligned_cols=146  Identities=12%  Similarity=0.080  Sum_probs=104.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ++|||||+|+||.+++++|+++| +.  |++++|+..... .. ...    ++. +.+|++|.+.++++++...  ++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~--V~~~~r~~~~~~-~~-~~~----~~~-~~~d~~~~~~~~~~~~~~~--~~~~   69 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITD--ILVVDNLKDGTK-FV-NLV----DLN-IADYMDKEDFLIQIMAGEE--FGDV   69 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCC--EEEEECCSSGGG-GH-HHH----TSC-CSEEEEHHHHHHHHHTTCC--CSSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcE--EEEEccCCCCch-hh-hcC----cce-eccccccHHHHHHHHhccc--cCCC
Confidence            48999999999999999999999 76  888888765421 11 111    122 6789998888776665210  2369


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC-
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-  187 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~-  187 (214)
                      |+|||+|+...       .      ..+++.+.+++|+.++..+++++...    +      . ++|++||...+.... 
T Consensus        70 d~vi~~a~~~~-------~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~------~-~~v~~SS~~v~g~~~~  125 (310)
T 1eq2_A           70 EAIFHEGACSS-------T------TEWDGKYMMDNNYQYSKELLHYCLER----E------I-PFLYASSAATYGGRTS  125 (310)
T ss_dssp             CEEEECCSCCC-------T------TCCCHHHHHHHTHHHHHHHHHHHHHH----T------C-CEEEEEEGGGGTTCCS
T ss_pred             cEEEECccccc-------C------cccCHHHHHHHHHHHHHHHHHHHHHc----C------C-eEEEEeeHHHhCCCCC
Confidence            99999999653       1      22345677899999999999988643    1      1 789999975433211 


Q ss_pred             -------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 -------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 -------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                             +..+...|+.+|.+.+.+++.++
T Consensus       126 ~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~  155 (310)
T 1eq2_A          126 DFIESREYEKPLNVYGYSKFLFDEYVRQIL  155 (310)
T ss_dssp             CBCSSGGGCCCSSHHHHHHHHHHHHHHHHG
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHH
Confidence                   12335789999999999999884

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.59  E-value=6.6e-15  Score=118.31  Aligned_cols=128  Identities=19%  Similarity=0.142  Sum_probs=98.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~--g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      |+++||||+|+||++++++|+++  |++  |++++|++.+.+.+.      ..++.++.+|++|.+++.++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~~l~------~~~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQ--IIAIVRNVEKASTLA------DQGVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGG--EEEEESCTTTTHHHH------HTTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCe--EEEEEcCHHHHhHHh------hcCCeEEEeccCCHHHHHHHHh-------
Confidence            46999999999999999999998  887  999999876543221      1357889999999998877765       


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      .+|++||+|+...       .        +      ++|+.++..+++++.    +.+.+      ++|++||...... 
T Consensus        66 ~~d~vi~~a~~~~-------~--------~------~~n~~~~~~l~~a~~----~~~~~------~~v~~Ss~~~~~~-  113 (287)
T 2jl1_A           66 GVSKLLFISGPHY-------D--------N------TLLIVQHANVVKAAR----DAGVK------HIAYTGYAFAEES-  113 (287)
T ss_dssp             TCSEEEECCCCCS-------C--------H------HHHHHHHHHHHHHHH----HTTCS------EEEEEEETTGGGC-
T ss_pred             cCCEEEEcCCCCc-------C--------c------hHHHHHHHHHHHHHH----HcCCC------EEEEECCCCCCCC-
Confidence            5899999998421       1        0      457788888887764    33333      9999999866321 


Q ss_pred             CCCCCcchhhhhHHHHHHHHHH
Q 028056          187 NRLGGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~  208 (214)
                           ...|+.+|.+.+.+.+.
T Consensus       114 -----~~~y~~~K~~~E~~~~~  130 (287)
T 2jl1_A          114 -----IIPLAHVHLATEYAIRT  130 (287)
T ss_dssp             -----CSTHHHHHHHHHHHHHH
T ss_pred             -----CCchHHHHHHHHHHHHH
Confidence                 24799999999998864

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.58  E-value=3e-14  Score=118.39  Aligned_cols=136  Identities=14%  Similarity=0.037  Sum_probs=97.3

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEec-CCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD-LTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~~  104 (214)
                      +++++++||||||+||.+++++|+++|++  |++++|+++... . +.+.. ..++.++.+| ++|++++.++++     
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~-~-~~l~~-~~~v~~v~~D~l~d~~~l~~~~~-----   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHH--VRAQVHSLKGLI-A-EELQA-IPNVTLFQGPLLNNVPLMDTLFE-----   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCC--EEEEESCSCSHH-H-HHHHT-STTEEEEESCCTTCHHHHHHHHT-----
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCE--EEEEECCCChhh-H-HHHhh-cCCcEEEECCccCCHHHHHHHHh-----
Confidence            44678999999999999999999999987  999999876531 1 11111 2358889999 999999887765     


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeecCc-c
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARV-G  182 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss~~-~  182 (214)
                        .+|++|||++...        .              +.|..+     +.+++.+++.+ .+      ++|++||.. +
T Consensus        73 --~~d~Vi~~a~~~~--------~--------------~~~~~~-----~~l~~aa~~~g~v~------~~V~~SS~~~~  117 (352)
T 1xgk_A           73 --GAHLAFINTTSQA--------G--------------DEIAIG-----KDLADAAKRAGTIQ------HYIYSSMPDHS  117 (352)
T ss_dssp             --TCSEEEECCCSTT--------S--------------CHHHHH-----HHHHHHHHHHSCCS------EEEEEECCCGG
T ss_pred             --cCCEEEEcCCCCC--------c--------------HHHHHH-----HHHHHHHHHcCCcc------EEEEeCCcccc
Confidence              5799999997431        0              113333     33444444444 33      999999986 3


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      ..+   ......|+.+|.+++.+++.+
T Consensus       118 ~~~---~~~~~~y~~sK~~~E~~~~~~  141 (352)
T 1xgk_A          118 LYG---PWPAVPMWAPKFTVENYVRQL  141 (352)
T ss_dssp             GTS---SCCCCTTTHHHHHHHHHHHTS
T ss_pred             ccC---CCCCccHHHHHHHHHHHHHHc
Confidence            333   234468999999999998764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.56  E-value=3.1e-15  Score=129.90  Aligned_cols=149  Identities=16%  Similarity=0.088  Sum_probs=107.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc---ccccchh---------hcCCCceeEEEecCCCHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA---TGLLDLK---------NRFPERLDVLQLDLTVESTIE   95 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~---~~~~~~~---------~~~~~~~~~~~~Dl~~~~~v~   95 (214)
                      .++||||||||+||.+++++|.+.|++  |++++|+....   +++.+.+         .....++.++.+|+++++.+.
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~--V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHR--IYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEE--EEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCE--EEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            489999999999999999999888887  99999988732   1222211         122468999999999987776


Q ss_pred             HHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEE
Q 028056           96 ASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVA  175 (214)
Q Consensus        96 ~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv  175 (214)
                              ....+|+|||||+...              ....+...+++|+.++..+++++..     +.      .++|
T Consensus       228 --------~~~~~D~Vih~Aa~~~--------------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~~------~~~v  274 (508)
T 4f6l_B          228 --------LPENMDTIIHAGARTD--------------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HH------ARLI  274 (508)
T ss_dssp             --------CSSCCSEEEECCCC----------------------CCHHHHHHHHHHHHHHHHT-----TT------CEEE
T ss_pred             --------CccCCCEEEECCceec--------------CCCCHHHHhhhHHHHHHHHHHHHHh-----CC------CcEE
Confidence                    3468999999999642              1134566788999999999998865     11      2899


Q ss_pred             EeecCcc--cCC----------CC---CCCCcchhhhhHHHHHHHHHHhcc
Q 028056          176 NLSARVG--SIG----------DN---RLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       176 ~iss~~~--~~~----------~~---~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      ++||...  ...          ..   +......|+.+|.+.+.+.+.+++
T Consensus       275 ~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  325 (508)
T 4f6l_B          275 YVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN  325 (508)
T ss_dssp             EEEESCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             EeCChhhccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH
Confidence            9999876  000          00   022568999999999999988754

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.54  E-value=5.7e-14  Score=112.67  Aligned_cols=125  Identities=18%  Similarity=0.170  Sum_probs=91.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~--g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +++||||+|+||.+++++|+++  |++  |++++|++.+.+.+.      ..++.++.+|++|++++.++++       .
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~--V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~-------~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQ--IVAIVRNPAKAQALA------AQGITVRQADYGDEAALTSALQ-------G   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGG--EEEEESCTTTCHHHH------HTTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCce--EEEEEcChHhhhhhh------cCCCeEEEcCCCCHHHHHHHHh-------C
Confidence            3899999999999999999998  887  999999876543221      1357889999999988877665       5


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|+|||+|+...       .                .|+.++..+++++.    +.+.+      ++|++||......  
T Consensus        66 ~d~vi~~a~~~~-------~----------------~~~~~~~~l~~a~~----~~~~~------~~v~~Ss~~~~~~--  110 (286)
T 2zcu_A           66 VEKLLLISSSEV-------G----------------QRAPQHRNVINAAK----AAGVK------FIAYTSLLHADTS--  110 (286)
T ss_dssp             CSEEEECC-------------------------------CHHHHHHHHHH----HHTCC------EEEEEEETTTTTC--
T ss_pred             CCEEEEeCCCCc-------h----------------HHHHHHHHHHHHHH----HcCCC------EEEEECCCCCCCC--
Confidence            799999998421       0                25667666666654    33333      9999999866421  


Q ss_pred             CCCCcchhhhhHHHHHHHHHH
Q 028056          188 RLGGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~  208 (214)
                          ...|+.+|.+++.+.+.
T Consensus       111 ----~~~y~~sK~~~e~~~~~  127 (286)
T 2zcu_A          111 ----PLGLADEHIETEKMLAD  127 (286)
T ss_dssp             ----CSTTHHHHHHHHHHHHH
T ss_pred             ----cchhHHHHHHHHHHHHH
Confidence                24799999999998864

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.53  E-value=6.5e-14  Score=113.33  Aligned_cols=138  Identities=16%  Similarity=0.029  Sum_probs=94.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +|+++||||||+||.+++++|+++| ++  |++++|++.+...  +.+.  ..++.++.+|++|++++.++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~--V~~~~R~~~~~~~--~~l~--~~~~~~~~~D~~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFK--VRVVTRNPRKKAA--KELR--LQGAEVVQGDQDDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSE--EEEEESCTTSHHH--HHHH--HTTCEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCce--EEEEEcCCCCHHH--HHHH--HCCCEEEEecCCCHHHHHHHHh-------
Confidence            4799999999999999999999998 76  9999998765321  1111  1357889999999999887765       


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      .+|+||||++...       .     ..       .+.|+.+    ++.+++.+++.+.+      +||++|+.. ..+.
T Consensus        72 ~~d~vi~~a~~~~-------~-----~~-------~~~~~~~----~~~~~~aa~~~gv~------~iv~~S~~~-~~~~  121 (299)
T 2wm3_A           72 GAYATFIVTNYWE-------S-----CS-------QEQEVKQ----GKLLADLARRLGLH------YVVYSGLEN-IKKL  121 (299)
T ss_dssp             TCSEEEECCCHHH-------H-----TC-------HHHHHHH----HHHHHHHHHHHTCS------EEEECCCCC-HHHH
T ss_pred             cCCEEEEeCCCCc-------c-----cc-------chHHHHH----HHHHHHHHHHcCCC------EEEEEcCcc-cccc
Confidence            5899999998532       0     00       1123334    34444455554444      899866543 3221


Q ss_pred             CCCCCcchhhhhHHHHHHHHHH
Q 028056          187 NRLGGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       187 ~~~~~~~~Y~asKaa~~~~~~~  208 (214)
                      ........|..+|.+++.+.+.
T Consensus       122 ~~~~~~~~y~~sK~~~e~~~~~  143 (299)
T 2wm3_A          122 TAGRLAAAHFDGKGEVEEYFRD  143 (299)
T ss_dssp             TTTSCCCHHHHHHHHHHHHHHH
T ss_pred             CCCcccCchhhHHHHHHHHHHH
Confidence            1112346899999999998875

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.48  E-value=2.9e-13  Score=111.77  Aligned_cols=138  Identities=15%  Similarity=0.095  Sum_probs=97.1

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +..++|+||||||+||++++++|++.|++  |++++|+...... ..........++.++.+|++|.+++.+++++.   
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~--V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~---   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRP--TYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH---   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCC--EEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCC--EEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC---
Confidence            34678999999999999999999999987  9999998743221 11111111357889999999999998888754   


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeecCccc
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGS  183 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~~  183 (214)
                        .+|+|||+++..                          |+.++..+++++...    + ..      ++|. |+ .+.
T Consensus        83 --~~d~Vi~~a~~~--------------------------n~~~~~~l~~aa~~~----g~v~------~~v~-S~-~g~  122 (346)
T 3i6i_A           83 --EIDIVVSTVGGE--------------------------SILDQIALVKAMKAV----GTIK------RFLP-SE-FGH  122 (346)
T ss_dssp             --TCCEEEECCCGG--------------------------GGGGHHHHHHHHHHH----CCCS------EEEC-SC-CSS
T ss_pred             --CCCEEEECCchh--------------------------hHHHHHHHHHHHHHc----CCce------EEee-cc-cCC
Confidence              789999999831                          667777777776533    2 22      6664 43 332


Q ss_pred             C-C-CCCCCCcchhhhhHHHHHHHHHH
Q 028056          184 I-G-DNRLGGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       184 ~-~-~~~~~~~~~Y~asKaa~~~~~~~  208 (214)
                      . . ..+.++...|+.+|.+++.+.+.
T Consensus       123 ~~~e~~~~~p~~~y~~sK~~~e~~l~~  149 (346)
T 3i6i_A          123 DVNRADPVEPGLNMYREKRRVRQLVEE  149 (346)
T ss_dssp             CTTTCCCCTTHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCcCCCcchHHHHHHHHHHHHHH
Confidence            2 1 12335668999999999998875

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.47  E-value=2.5e-14  Score=115.62  Aligned_cols=111  Identities=18%  Similarity=0.191  Sum_probs=85.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++||||+||+|+++++.|++.|++  |++++|+.++.+.+.+.+... .++.++.+|+++++++.++++    
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~--V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~----  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAE--VVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK----  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT----
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCE--EEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH----
Confidence            4578999999999999999999999999997  999999876655544433221 246788899999988876665    


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccH-hhhhhheeeechhHH
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEK-SSLMLAYEVNAVGPI  150 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  150 (214)
                         .+|+||||+|...      ...+..+.+. +.+...+++|+.+++
T Consensus       188 ---~~DvlVn~ag~g~------~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 ---GAHFVFTAGAIGL------ELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             ---TCSEEEECCCTTC------CSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             ---hCCEEEECCCccc------cCCChhHcCchHHHHHHHHhhhhhhH
Confidence               4799999998642      1233444554 778889999999987

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.46  E-value=3.1e-13  Score=111.97  Aligned_cols=103  Identities=18%  Similarity=0.129  Sum_probs=82.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcC-----CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKN-----DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g-----~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ++++|||||+|+||.+++++|+++|     ++  |++++|++....     .  ...++.++.+|++|.+++.++++.. 
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~--V~~~~r~~~~~~-----~--~~~~~~~~~~Dl~d~~~~~~~~~~~-   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWK--VYGVARRTRPAW-----H--EDNPINYVQCDISDPDDSQAKLSPL-   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEE--EEEEESSCCCSC-----C--CSSCCEEEECCTTSHHHHHHHHTTC-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceE--EEEEeCCCCccc-----c--ccCceEEEEeecCCHHHHHHHHhcC-
Confidence            4789999999999999999999999     75  999999876533     1  1346889999999999887776532 


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhH
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL  159 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  159 (214)
                         .++|+|||+|+...                ++..+.+++|+.++..+++++.+.
T Consensus        71 ---~~~d~vih~a~~~~----------------~~~~~~~~~n~~~~~~l~~a~~~~  108 (364)
T 2v6g_A           71 ---TDVTHVFYVTWANR----------------STEQENCEANSKMFRNVLDAVIPN  108 (364)
T ss_dssp             ---TTCCEEEECCCCCC----------------SSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ---CCCCEEEECCCCCc----------------chHHHHHHHhHHHHHHHHHHHHHh
Confidence               24999999998542                134567889999999999988654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.43  E-value=5.7e-13  Score=107.92  Aligned_cols=131  Identities=17%  Similarity=0.158  Sum_probs=88.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-------CcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-------GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      +++++||||||+||.+++++|+++|++  |++++|+..       +.+.+.+ +.  ..++.++.+|++|.+++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~~~~~~~~-l~--~~~v~~v~~D~~d~~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNP--TYALVRKTITAANPETKEELIDN-YQ--SLGVILLEGDINDHETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCC--EEEEECCSCCSSCHHHHHHHHHH-HH--HTTCEEEECCTTCHHHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCc--EEEEECCCcccCChHHHHHHHHH-HH--hCCCEEEEeCCCCHHHHHHHHh-
Confidence            468999999999999999999999987  888999861       1111111 11  2358899999999998877776 


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeec
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSA  179 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss  179 (214)
                            .+|+|||+++...                          +.+...+++++    ++.+ ..      ++| . |
T Consensus        76 ------~~d~vi~~a~~~~--------------------------~~~~~~l~~aa----~~~g~v~------~~v-~-S  111 (307)
T 2gas_A           76 ------QVDIVICAAGRLL--------------------------IEDQVKIIKAI----KEAGNVK------KFF-P-S  111 (307)
T ss_dssp             ------TCSEEEECSSSSC--------------------------GGGHHHHHHHH----HHHCCCS------EEE-C-S
T ss_pred             ------CCCEEEECCcccc--------------------------cccHHHHHHHH----HhcCCce------EEe-e-c
Confidence                  5899999998431                          23344455544    3333 32      666 2 4


Q ss_pred             CcccCCC---CCCCCcchhhhhHHHHHHHHHHh
Q 028056          180 RVGSIGD---NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       180 ~~~~~~~---~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      ..+....   ...+....| .+|.+++.+.+..
T Consensus       112 ~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~  143 (307)
T 2gas_A          112 EFGLDVDRHDAVEPVRQVF-EEKASIRRVIEAE  143 (307)
T ss_dssp             CCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHHH
T ss_pred             ccccCcccccCCCcchhHH-HHHHHHHHHHHHc
Confidence            4442211   112335689 9999999988753

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.42  E-value=8.4e-13  Score=109.95  Aligned_cols=116  Identities=15%  Similarity=0.080  Sum_probs=91.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCC-CcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~-~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      +||||||+|+||++++++|+++|. +  |+..+|+                         +|++++.++++       .+
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~--v~~~d~~-------------------------~d~~~l~~~~~-------~~   47 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHH--IFEVHRQ-------------------------TKEEELESALL-------KA   47 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCE--EEECCTT-------------------------CCHHHHHHHHH-------HC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCE--EEEECCC-------------------------CCHHHHHHHhc-------cC
Confidence            699999999999999999999998 5  6665553                         67788887776       47


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |+|||+|+...               .+.+.+.+++|+.++..+++++..    .+..     .++|++||.....    
T Consensus        48 d~Vih~a~~~~---------------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~-----~~~v~~Ss~~~~~----   99 (369)
T 3st7_A           48 DFIVHLAGVNR---------------PEHDKEFSLGNVSYLDHVLDILTR----NTKK-----PAILLSSSIQATQ----   99 (369)
T ss_dssp             SEEEECCCSBC---------------TTCSTTCSSSCCBHHHHHHHHHTT----CSSC-----CEEEEEEEGGGGS----
T ss_pred             CEEEECCcCCC---------------CCCHHHHHHHHHHHHHHHHHHHHH----hCCC-----CeEEEeCchhhcC----
Confidence            99999999653               124556789999999999988742    2211     2899999976544    


Q ss_pred             CCCcchhhhhHHHHHHHHHHhc
Q 028056          189 LGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~la  210 (214)
                         ...|+.+|.+.+.+.+.++
T Consensus       100 ---~~~Y~~sK~~~E~~~~~~~  118 (369)
T 3st7_A          100 ---DNPYGESKLQGEQLLREYA  118 (369)
T ss_dssp             ---CSHHHHHHHHHHHHHHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHH
Confidence               3689999999999998863

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.41  E-value=3.7e-12  Score=103.40  Aligned_cols=138  Identities=12%  Similarity=0.084  Sum_probs=93.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--ccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .++++||||||+||.+++++|+++|++  |++++|+....  +...........++.++.+|++|++++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~------   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHP--TYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK------   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC--EEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCc--EEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh------
Confidence            367999999999999999999999987  99999986542  11111100013468899999999998887765      


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeecCcccC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~~~  184 (214)
                       .+|+|||+++...       ..               .|+.++..+++++    ++.+ .+      ++|+  |..+..
T Consensus        76 -~~d~vi~~a~~~~-------~~---------------~~~~~~~~l~~aa----~~~g~v~------~~v~--S~~g~~  120 (313)
T 1qyd_A           76 -QVDVVISALAGGV-------LS---------------HHILEQLKLVEAI----KEAGNIK------RFLP--SEFGMD  120 (313)
T ss_dssp             -TCSEEEECCCCSS-------SS---------------TTTTTHHHHHHHH----HHSCCCS------EEEC--SCCSSC
T ss_pred             -CCCEEEECCcccc-------ch---------------hhHHHHHHHHHHH----HhcCCCc------eEEe--cCCcCC
Confidence             5899999998653       10               1566666666655    3443 33      7764  433322


Q ss_pred             CC---CC-CCCcchhhhhHHHHHHHHHHh
Q 028056          185 GD---NR-LGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       185 ~~---~~-~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      ..   .+ .+....| .+|.+++.+.+..
T Consensus       121 ~~~~~~~~~p~~~~y-~sK~~~e~~~~~~  148 (313)
T 1qyd_A          121 PDIMEHALQPGSITF-IDKRKVRRAIEAA  148 (313)
T ss_dssp             TTSCCCCCSSTTHHH-HHHHHHHHHHHHT
T ss_pred             ccccccCCCCCcchH-HHHHHHHHHHHhc
Confidence            11   01 1335678 9999999988753

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.39  E-value=2.5e-12  Score=111.91  Aligned_cols=138  Identities=12%  Similarity=0.020  Sum_probs=96.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +++||||||+|+||.+++++|++.|++  |++++|+....+              .+.+|+.+..         .+.+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~--V~~l~R~~~~~~--------------~v~~d~~~~~---------~~~l~~  201 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHE--VIQLVRKEPKPG--------------KRFWDPLNPA---------SDLLDG  201 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESSSCCTT--------------CEECCTTSCC---------TTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCCCCcc--------------ceeecccchh---------HHhcCC
Confidence            579999999999999999999999997  999999876522              2566776431         223357


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC-
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-  186 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-  186 (214)
                      +|+|||+|+...       .   .+.+.+.....+++|+.++..+++++.   +..+..      ++|++||...+... 
T Consensus       202 ~D~Vih~A~~~~-------~---~~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~------r~V~~SS~~vyg~~~  262 (516)
T 3oh8_A          202 ADVLVHLAGEPI-------F---GRFNDSHKEAIRESRVLPTKFLAELVA---ESTQCT------TMISASAVGFYGHDR  262 (516)
T ss_dssp             CSEEEECCCC---------------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCC------EEEEEEEGGGGCSEE
T ss_pred             CCEEEECCCCcc-------c---cccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCC------EEEEeCcceEecCCC
Confidence            999999999653       1   134456677789999999999999744   233333      89999996543300 


Q ss_pred             -------CCCCCcchhhhhHHHHHHHHHHh
Q 028056          187 -------NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       187 -------~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                             ....+...|+.+|...+.+.+.+
T Consensus       263 ~~~~~~E~~~~~~~~y~~~~~~~E~~~~~~  292 (516)
T 3oh8_A          263 GDEILTEESESGDDFLAEVCRDWEHATAPA  292 (516)
T ss_dssp             EEEEECTTSCCCSSHHHHHHHHHHHTTHHH
T ss_pred             CCCccCCCCCCCcChHHHHHHHHHHHHHHH
Confidence                   11124567888888877665544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.38  E-value=2.7e-12  Score=104.00  Aligned_cols=81  Identities=16%  Similarity=0.228  Sum_probs=62.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--ccccchhhc-CCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNR-FPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .++++||||||+||.+++++|+++|++  |++++|+....  ....+.+.. ...++.++.+|++|.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHP--TFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC--EEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCC--EEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-----
Confidence            467999999999999999999999987  88899986542  111111111 13468899999999999887776     


Q ss_pred             cCCccEEEECccc
Q 028056          105 YGSLNLLINASGI  117 (214)
Q Consensus       105 ~~~vd~lv~nag~  117 (214)
                        .+|+|||+++.
T Consensus        77 --~~d~vi~~a~~   87 (308)
T 1qyc_A           77 --NVDVVISTVGS   87 (308)
T ss_dssp             --TCSEEEECCCG
T ss_pred             --CCCEEEECCcc
Confidence              58999999984

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.37  E-value=8.7e-13  Score=107.64  Aligned_cols=134  Identities=12%  Similarity=0.085  Sum_probs=88.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCc--ccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGA--TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~-~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .++++||||+|+||.+++++|+++|++  |++++|+. ...  +...........++.++.+|++|.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~-----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHP--TFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK-----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCC--EEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCc--EEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc-----
Confidence            367999999999999999999999987  99999986 221  11111100012468899999999998887776     


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCC-CCCCCCceEEEEeecCccc
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGG-TGIERDVAVVANLSARVGS  183 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~~~~iv~iss~~~~  183 (214)
                        .+|+|||+++...                          +.++..+++++    ++.+ .+      ++|  .|..+.
T Consensus        77 --~~d~vi~~a~~~~--------------------------~~~~~~l~~aa----~~~g~v~------~~v--~S~~g~  116 (321)
T 3c1o_A           77 --QVDIVISALPFPM--------------------------ISSQIHIINAI----KAAGNIK------RFL--PSDFGC  116 (321)
T ss_dssp             --TCSEEEECCCGGG--------------------------SGGGHHHHHHH----HHHCCCC------EEE--CSCCSS
T ss_pred             --CCCEEEECCCccc--------------------------hhhHHHHHHHH----HHhCCcc------EEe--cccccc
Confidence              5899999998421                          23334444443    3333 33      666  344442


Q ss_pred             CCC--CC-CCCcchhhhhHHHHHHHHHHh
Q 028056          184 IGD--NR-LGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       184 ~~~--~~-~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      ...  .+ .+....| .+|.+++.+.+..
T Consensus       117 ~~~~~~~~~p~~~~y-~sK~~~e~~~~~~  144 (321)
T 3c1o_A          117 EEDRIKPLPPFESVL-EKKRIIRRAIEAA  144 (321)
T ss_dssp             CGGGCCCCHHHHHHH-HHHHHHHHHHHHH
T ss_pred             CccccccCCCcchHH-HHHHHHHHHHHHc
Confidence            111  01 1224679 9999999988753

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.37  E-value=1.7e-11  Score=98.57  Aligned_cols=107  Identities=14%  Similarity=0.159  Sum_probs=79.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ++|||||||+||++++++|++. |++  |++++|++++.+.+.      ..++.++.+|++|++++.++++       .+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~--V~~~~R~~~~~~~~~------~~~v~~~~~D~~d~~~l~~~~~-------~~   66 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDH--FHIGVRNVEKVPDDW------RGKVSVRQLDYFNQESMVEAFK-------GM   66 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTT--EEEEESSGGGSCGGG------BTTBEEEECCTTCHHHHHHHTT-------TC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCc--EEEEECCHHHHHHhh------hCCCEEEEcCCCCHHHHHHHHh-------CC
Confidence            5899999999999999999998 887  999999886644321      2468899999999998887765       68


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      |+||||++...       ..              ..|+.++    +.+++.+++.+.+      +||++||...
T Consensus        67 d~vi~~a~~~~-------~~--------------~~~~~~~----~~l~~aa~~~gv~------~iv~~Ss~~~  109 (289)
T 3e48_A           67 DTVVFIPSIIH-------PS--------------FKRIPEV----ENLVYAAKQSGVA------HIIFIGYYAD  109 (289)
T ss_dssp             SEEEECCCCCC-------SH--------------HHHHHHH----HHHHHHHHHTTCC------EEEEEEESCC
T ss_pred             CEEEEeCCCCc-------cc--------------hhhHHHH----HHHHHHHHHcCCC------EEEEEcccCC
Confidence            99999998642       10              0134444    4444455555544      9999999653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.36  E-value=5.2e-12  Score=101.33  Aligned_cols=126  Identities=15%  Similarity=0.067  Sum_probs=88.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ++++|||+ |.||.+++++|+++|++  |++++|++.+.+.+.      ..++.++.+|++|.+            +..+
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~------------~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWR--IIGTSRNPDQMEAIR------ASGAEPLLWPGEEPS------------LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCE--EEEEESCGGGHHHHH------HTTEEEEESSSSCCC------------CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCE--EEEEEcChhhhhhHh------hCCCeEEEecccccc------------cCCC
Confidence            68999998 99999999999999997  999999876533221      146889999999833            4579


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhc--CCCCCCCCceEEEEeecCcccCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKV--GGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      |+|||+|+...       ..     .+                .++.++..+++  .+..      ++|++||...+...
T Consensus        65 d~vi~~a~~~~-------~~-----~~----------------~~~~l~~a~~~~~~~~~------~~v~~Ss~~vyg~~  110 (286)
T 3ius_A           65 THLLISTAPDS-------GG-----DP----------------VLAALGDQIAARAAQFR------WVGYLSTTAVYGDH  110 (286)
T ss_dssp             CEEEECCCCBT-------TB-----CH----------------HHHHHHHHHHHTGGGCS------EEEEEEEGGGGCCC
T ss_pred             CEEEECCCccc-------cc-----cH----------------HHHHHHHHHHhhcCCce------EEEEeecceecCCC
Confidence            99999999653       11     00                01233333333  2222      89999997543221


Q ss_pred             --------CCCCCcchhhhhHHHHHHHHHHh
Q 028056          187 --------NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       187 --------~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                              .+..+...|+.+|.+.+.+.+.+
T Consensus       111 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~  141 (286)
T 3ius_A          111 DGAWVDETTPLTPTAARGRWRVMAEQQWQAV  141 (286)
T ss_dssp             TTCEECTTSCCCCCSHHHHHHHHHHHHHHHS
T ss_pred             CCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh
Confidence                    12344568999999999998875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.34  E-value=2.7e-12  Score=104.68  Aligned_cols=77  Identities=17%  Similarity=0.166  Sum_probs=61.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      ++++||||||+||.+++++|+++|++  |++++|+... .+.+.++ .  ..++.++.+|++|.+++.++++       .
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~--V~~l~R~~~~~~~~~~~l-~--~~~v~~v~~Dl~d~~~l~~a~~-------~   79 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHP--TYVFTRPNSSKTTLLDEF-Q--SLGAIIVKGELDEHEKLVELMK-------K   79 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCC--EEEEECTTCSCHHHHHHH-H--HTTCEEEECCTTCHHHHHHHHT-------T
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCc--EEEEECCCCchhhHHHHh-h--cCCCEEEEecCCCHHHHHHHHc-------C
Confidence            67999999999999999999999987  8999998752 2112111 1  2358899999999998887776       5


Q ss_pred             ccEEEECccc
Q 028056          108 LNLLINASGI  117 (214)
Q Consensus       108 vd~lv~nag~  117 (214)
                      +|+|||+++.
T Consensus        80 ~d~vi~~a~~   89 (318)
T 2r6j_A           80 VDVVISALAF   89 (318)
T ss_dssp             CSEEEECCCG
T ss_pred             CCEEEECCch
Confidence            8999999984

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.18  E-value=1.1e-10  Score=90.47  Aligned_cols=79  Identities=11%  Similarity=0.170  Sum_probs=61.3

Q ss_pred             cccCcEEEEecC----------------CCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecC
Q 028056           25 KWKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL   88 (214)
Q Consensus        25 ~l~~k~vlItG~----------------s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl   88 (214)
                      +|+||++|||||                ||+||.++|++|+++|++  |++++++. .++.        +..+  ..+|+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~--V~l~~~~~-~l~~--------~~g~--~~~dv   71 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN--VTLVSGPV-SLPT--------PPFV--KRVDV   71 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE--EEEEECSC-CCCC--------CTTE--EEEEC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCE--EEEEECCc-cccc--------CCCC--eEEcc
Confidence            589999999999                689999999999999998  88887765 2210        1112  35688


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEECccccC
Q 028056           89 TVESTIEASAKSIKEKYGSLNLLINASGILS  119 (214)
Q Consensus        89 ~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~  119 (214)
                      ++.++   +++.+.+.++++|++|||||+..
T Consensus        72 ~~~~~---~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           72 MTALE---MEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             CSHHH---HHHHHHHHGGGCSEEEECCBCCS
T ss_pred             CcHHH---HHHHHHHhcCCCCEEEECCcccC
Confidence            87544   56777778899999999999864

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.02  E-value=2.9e-09  Score=85.84  Aligned_cols=111  Identities=14%  Similarity=0.106  Sum_probs=74.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +||||||||.||++++++|.++|++  |++++|++...+               +..|     .+      ..+.+..+|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~--V~~l~R~~~~~~---------------~~~~-----~~------~~~~l~~~d   53 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHE--VTLVSRKPGPGR---------------ITWD-----EL------AASGLPSCD   53 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCTTE---------------EEHH-----HH------HHHCCCSCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCCCcCe---------------eecc-----hh------hHhhccCCC
Confidence            4899999999999999999999997  888899764311               1111     11      112346899


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      .+||.|+...       .......+.+...+.+++|+.++-.+.+.+...  ..+.      ..+|+.||...+
T Consensus        54 ~vihla~~~i-------~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~------~~~i~~Ss~~vy  112 (298)
T 4b4o_A           54 AAVNLAGENI-------LNPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPP------KAWVLVTGVAYY  112 (298)
T ss_dssp             EEEECCCCCS-------SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCC------SEEEEEEEGGGS
T ss_pred             EEEEeccCcc-------cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCc------eEEEEEeeeeee
Confidence            9999998542       222334455666677888988888777765432  1111      267777776543

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.00  E-value=1.7e-09  Score=84.06  Aligned_cols=79  Identities=14%  Similarity=0.118  Sum_probs=58.8

Q ss_pred             cCcEEEEecC----------------CCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCC
Q 028056           27 KGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV   90 (214)
Q Consensus        27 ~~k~vlItG~----------------s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   90 (214)
                      +||++|||||                ||++|.++|+.|+++|++  |++++|+... ...      .+..+.  ..|+. 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~--V~lv~~~~~~-~~~------~~~~~~--~~~v~-   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYE--VCLITTKRAL-KPE------PHPNLS--IREIT-   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCE--EEEEECTTSC-CCC------CCTTEE--EEECC-
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCE--EEEEeCCccc-ccc------CCCCeE--EEEHh-
Confidence            5899999999                888999999999999998  9999987632 110      012222  23444 


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECccccC
Q 028056           91 ESTIEASAKSIKEKYGSLNLLINASGILS  119 (214)
Q Consensus        91 ~~~v~~~~~~~~~~~~~vd~lv~nag~~~  119 (214)
                        +++++++.+.+.+++.|++|+||++..
T Consensus        70 --s~~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           70 --NTKDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             --SHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             --HHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence              556667777777889999999999764

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.99  E-value=8.3e-10  Score=81.24  Aligned_cols=77  Identities=10%  Similarity=0.029  Sum_probs=63.9

Q ss_pred             chhHHHHHHHHhcCCCcEEEEeecCCCCccc---ccchhhcCCCceeEEEecCCCH--HHHHHHHHHHHHHcCCccEEEE
Q 028056           39 GIGLEFAKQLLEKNDKGCVIATCRNPNGATG---LLDLKNRFPERLDVLQLDLTVE--STIEASAKSIKEKYGSLNLLIN  113 (214)
Q Consensus        39 giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~~~vd~lv~  113 (214)
                      -++.+.++.|++.|++  |++..|++...+.   ..+.+.+.+.++..+++|++++  ++++++++.+.+.+|+ |+|||
T Consensus        27 ~p~~a~a~~La~~Ga~--vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVD--VVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             CCCHHHHHHHHHTTCC--EEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             CCCHHHHHHHHHcCCC--EEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            4789999999999998  8888887654332   3445556677888999999999  9999999999998899 99999


Q ss_pred             Ccccc
Q 028056          114 ASGIL  118 (214)
Q Consensus       114 nag~~  118 (214)
                      |||+.
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99964

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.89  E-value=2.5e-09  Score=74.08  Aligned_cols=75  Identities=19%  Similarity=0.100  Sum_probs=59.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .+++++|+|+ |++|..+++.|.+.| ++  |++++|++++.+.+.      ...+.++.+|+++.+++.++++      
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~--v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~------   68 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYS--VTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKALG------   68 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEE--EEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHTT------
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCce--EEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHHc------
Confidence            3578999999 999999999999999 54  999999876544322      2356778899999887766653      


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                       .+|++|++++.
T Consensus        69 -~~d~vi~~~~~   79 (118)
T 3ic5_A           69 -GFDAVISAAPF   79 (118)
T ss_dssp             -TCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             78999999963

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.87  E-value=1.1e-09  Score=90.04  Aligned_cols=151  Identities=9%  Similarity=-0.036  Sum_probs=94.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCC-----cEEEEeecCCC--CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDK-----GCVIATCRNPN--GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~-----~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .+++||||+|.||.+++..|+++|..     ..|+++++++.  ..+.....+.  ...+.++ .|+.+..++.+.+   
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~--~~~~~~~-~di~~~~~~~~a~---   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELE--DCAFPLL-AGLEATDDPKVAF---   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH--TTTCTTE-EEEEEESCHHHHT---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhh--ccccccc-CCeEeccChHHHh---
Confidence            36999999999999999999998851     13888887641  1111111111  1112223 5666554444333   


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                          ...|++||.||...        .+  .   +...+.++.|+.++..+++++..+-  ...      .+++++|+..
T Consensus        79 ----~~~D~Vih~Ag~~~--------~~--~---~~~~~~~~~Nv~~t~~l~~a~~~~~--~~~------~~vvv~snp~  133 (327)
T 1y7t_A           79 ----KDADYALLVGAAPR--------KA--G---MERRDLLQVNGKIFTEQGRALAEVA--KKD------VKVLVVGNPA  133 (327)
T ss_dssp             ----TTCSEEEECCCCCC--------CT--T---CCHHHHHHHHHHHHHHHHHHHHHHS--CTT------CEEEECSSSH
T ss_pred             ----CCCCEEEECCCcCC--------CC--C---CCHHHHHHHHHHHHHHHHHHHHhhc--CCC------eEEEEeCCch
Confidence                26899999999753        11  1   1234568899999999998876541  112      2778888765


Q ss_pred             ccC-----CCC-CCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSI-----GDN-RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~-----~~~-~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ...     ... +.++...|+.+|...+.+.+.++
T Consensus       134 ~~~~~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a  168 (327)
T 1y7t_A          134 NTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLA  168 (327)
T ss_dssp             HHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHcCCCChhheeccchHHHHHHHHHHH
Confidence            211     001 14455679999998888877664

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.72  E-value=2.1e-08  Score=84.63  Aligned_cols=84  Identities=13%  Similarity=0.147  Sum_probs=67.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCC-cEEEEeecCCCCcccccchhhcC-CCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDK-GCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~-~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++++|+|+ |+||+.+++.|++.|.- ..|++.+|+.++++.+.+.+... +.++..+.+|++|.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            47899999 89999999999999841 14999999988776655444322 246888999999999999998876     


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      ++|+||||++..
T Consensus        76 ~~DvVin~ag~~   87 (405)
T 4ina_A           76 KPQIVLNIALPY   87 (405)
T ss_dssp             CCSEEEECSCGG
T ss_pred             CCCEEEECCCcc
Confidence            789999999854

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.63  E-value=4.5e-08  Score=83.67  Aligned_cols=78  Identities=19%  Similarity=0.192  Sum_probs=60.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++|+++|+| +|++|+++++.|++.|++  |++.+|+.++++.+.+..    ..+..+.+|++|.+++.++++       
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~--V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~-------   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIK--VTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCE--EEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCE--EEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc-------
Confidence            468999997 799999999999999976  999999876544332221    236788899999888776654       


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|+||||++..
T Consensus        68 ~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 KHDLVISLIPYT   79 (450)
T ss_dssp             TSSEEEECCC--
T ss_pred             CCcEEEECCccc
Confidence            689999999864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.57  E-value=2e-08  Score=87.49  Aligned_cols=105  Identities=24%  Similarity=0.192  Sum_probs=65.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++|+++|||| ||+|++++..|++.|++  |++.+|+.++++.+.+.+   +.++.    ++.+.       ++.  .
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~--V~i~~R~~~~a~~la~~~---~~~~~----~~~dl-------~~~--~  421 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAK--VVIANRTYERALELAEAI---GGKAL----SLTDL-------DNY--H  421 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC---CEEEESSHHHHHHHHHHT---TC-CE----ETTTT-------TTC---
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHc---CCcee----eHHHh-------hhc--c
Confidence            578899999999 59999999999999997  888999876655443332   22221    22221       000  1


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHH
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPI  150 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~  150 (214)
                      .+.+|++|||+|....|..  ...++.+...+.+...+++|+.+..
T Consensus       422 ~~~~DilVN~agvg~~~~~--~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          422 PEDGMVLANTTSMGMQPNV--EETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             -CCSEEEEECSSTTCTTCT--TCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             ccCceEEEECCCCCCCCCC--CCCCCChHHcCcCcEEEEEeeCCcc
Confidence            2358999999997532110  0134455666778889999998753

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.55  E-value=4.2e-08  Score=74.40  Aligned_cols=79  Identities=13%  Similarity=0.109  Sum_probs=55.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+||+||||..++..+...|++  |+++++++++.+.+.    +.+..   ..+|.++.+..+.+.+...  .+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~--V~~~~~~~~~~~~~~----~~g~~---~~~d~~~~~~~~~~~~~~~--~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGAR--IYTTAGSDAKREMLS----RLGVE---YVGDSRSVDFADEILELTD--GY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHH----TTCCS---EEEETTCSTHHHHHHHHTT--TC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHH----HcCCC---EEeeCCcHHHHHHHHHHhC--CC
Confidence            5799999999999999999999999996  888998765543322    22322   2357777654444333221  13


Q ss_pred             CccEEEECcc
Q 028056          107 SLNLLINASG  116 (214)
Q Consensus       107 ~vd~lv~nag  116 (214)
                      .+|++|+|+|
T Consensus       107 ~~D~vi~~~g  116 (198)
T 1pqw_A          107 GVDVVLNSLA  116 (198)
T ss_dssp             CEEEEEECCC
T ss_pred             CCeEEEECCc
Confidence            6999999997

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.52  E-value=9.1e-09  Score=82.94  Aligned_cols=82  Identities=18%  Similarity=0.146  Sum_probs=57.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++|||++ |+|+++++.|++.| +  |++++|+.++++.+.+.+.........+.+|+++.          .+
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~--V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~  189 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-N--IIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DV  189 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-E--EEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TC
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-C--EEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HH
Confidence            45789999999997 99999999999999 7  99999987665554433322110001123455442          34


Q ss_pred             HcCCccEEEECccccC
Q 028056          104 KYGSLNLLINASGILS  119 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~  119 (214)
                      .++++|++|||++...
T Consensus       190 ~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          190 DLDGVDIIINATPIGM  205 (287)
T ss_dssp             CCTTCCEEEECSCTTC
T ss_pred             hhCCCCEEEECCCCCC
Confidence            4578999999999764

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.50  E-value=6.5e-08  Score=79.30  Aligned_cols=80  Identities=15%  Similarity=0.167  Sum_probs=58.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|||++||||..++..+...|++  |+++++++++++.+    .+.+..   ..+|.++.+++.+.+.++..  +
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~--V~~~~~~~~~~~~~----~~~g~~---~~~d~~~~~~~~~~~~~~~~--~  213 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCK--VVGAAGSDEKIAYL----KQIGFD---AAFNYKTVNSLEEALKKASP--D  213 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCE--EEEEESSHHHHHHH----HHTTCS---EEEETTSCSCHHHHHHHHCT--T
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH----HhcCCc---EEEecCCHHHHHHHHHHHhC--C
Confidence            5799999999999999999999999997  99999877654433    222322   23588774455555555433  5


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1v3u_A          214 GYDCYFDNVGG  224 (333)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCeEEEECCCh
Confidence            79999999984

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.50  E-value=9e-08  Score=79.78  Aligned_cols=78  Identities=23%  Similarity=0.178  Sum_probs=59.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++++++|+|+ |+||..+++.+...|++  |+++++++++++.+.+.   .+..   +.+|.++.+++.+.+.     
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~--V~~~d~~~~~~~~~~~~---~g~~---~~~~~~~~~~l~~~~~-----  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQ--VTILDVNHKRLQYLDDV---FGGR---VITLTATEANIKKSVQ-----  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH---TTTS---EEEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHHh---cCce---EEEecCCHHHHHHHHh-----
Confidence            578899999999 99999999999999997  99999987654443322   2222   4568888777766554     


Q ss_pred             cCCccEEEECcccc
Q 028056          105 YGSLNLLINASGIL  118 (214)
Q Consensus       105 ~~~vd~lv~nag~~  118 (214)
                        ..|++|++++..
T Consensus       229 --~~DvVi~~~g~~  240 (369)
T 2eez_A          229 --HADLLIGAVLVP  240 (369)
T ss_dssp             --HCSEEEECCC--
T ss_pred             --CCCEEEECCCCC
Confidence              579999999854

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.44  E-value=2.4e-07  Score=79.42  Aligned_cols=82  Identities=17%  Similarity=0.209  Sum_probs=60.1

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      -..++++++++|+|+ |++|+++++.|++. |.+  |++.+|+.++++.+.+.     .++..+.+|++|.+++.++++ 
T Consensus        17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~--V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~-   87 (467)
T 2axq_A           17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAANDDIN--VTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA-   87 (467)
T ss_dssp             ------CEEEEEECC-STTHHHHHHHHHTSTTEE--EEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH-
T ss_pred             cccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCe--EEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc-
Confidence            346678899999997 99999999999998 554  99999987665443322     135667899999888776654 


Q ss_pred             HHHHcCCccEEEECcccc
Q 028056          101 IKEKYGSLNLLINASGIL  118 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~  118 (214)
                            .+|+|||+++..
T Consensus        88 ------~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ------DNDVVISLIPYT   99 (467)
T ss_dssp             ------TSSEEEECSCGG
T ss_pred             ------CCCEEEECCchh
Confidence                  689999999864

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.44  E-value=5.2e-10  Score=95.60  Aligned_cols=42  Identities=31%  Similarity=0.366  Sum_probs=36.8

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~   67 (214)
                      .+.+.||+++|||++ +||+.+|+.|+..|++  |+++++++...
T Consensus       260 g~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~--Viv~D~~~~~a  301 (488)
T 3ond_A          260 DVMIAGKVAVVAGYG-DVGKGCAAALKQAGAR--VIVTEIDPICA  301 (488)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCHHHH
T ss_pred             CCcccCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEcCCHHHH
Confidence            356899999999987 9999999999999997  99999886543

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.40  E-value=3.5e-07  Score=75.37  Aligned_cols=80  Identities=16%  Similarity=0.130  Sum_probs=59.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+|++|+||..++..+...|++  |+++++++++.+.+.    +.+..   ...|.++.+++.+.+.++.+.  
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~--V~~~~~~~~~~~~~~----~~g~~---~~~d~~~~~~~~~~~~~~~~~--  237 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYR--VLGIDGGEGKEELFR----SIGGE---VFIDFTKEKDIVGAVLKATDG--  237 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECSTTHHHHHH----HTTCC---EEEETTTCSCHHHHHHHHHTS--
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCc--EEEEcCCHHHHHHHH----HcCCc---eEEecCccHhHHHHHHHHhCC--
Confidence            4799999999999999999999999996  999999877654332    22322   234887655666666665443  


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+|+|.
T Consensus       238 ~~D~vi~~~g~  248 (347)
T 2hcy_A          238 GAHGVINVSVS  248 (347)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.38  E-value=7.9e-07  Score=72.40  Aligned_cols=85  Identities=15%  Similarity=0.097  Sum_probs=59.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC---CCcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP---NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .++++|+++|+|+ ||+|++++..|++.|+. .|.+++|+.   ++++.+.+.+.... .+.....++.+.+++.+.+. 
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~-~V~i~nR~~~~~~~a~~la~~~~~~~-~~~~~~~~~~~~~~l~~~l~-  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVK-EISIFNRKDDFYANAEKTVEKINSKT-DCKAQLFDIEDHEQLRKEIA-  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHHH-
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCC-EEEEEECCCchHHHHHHHHHHhhhhc-CCceEEeccchHHHHHhhhc-
Confidence            5688999999998 79999999999999995 599999994   34343333332211 13334457776655544333 


Q ss_pred             HHHHcCCccEEEECcccc
Q 028056          101 IKEKYGSLNLLINASGIL  118 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~  118 (214)
                            ..|+|||+....
T Consensus       226 ------~aDiIINaTp~G  237 (315)
T 3tnl_A          226 ------ESVIFTNATGVG  237 (315)
T ss_dssp             ------TCSEEEECSSTT
T ss_pred             ------CCCEEEECccCC
Confidence                  679999998654

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.30  E-value=5.8e-07  Score=64.05  Aligned_cols=76  Identities=18%  Similarity=0.170  Sum_probs=54.8

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +++++++|+|+ |.+|..+++.|.+.|.+  |++++++++..+.+.+    .  ....+.+|.++.+.+.++      ..
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~--v~~~d~~~~~~~~~~~----~--~~~~~~~d~~~~~~l~~~------~~   68 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHE--VLAVDINEEKVNAYAS----Y--ATHAVIANATEENELLSL------GI   68 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCC--CEEEESCHHHHHTTTT----T--CSEEEECCTTCHHHHHTT------TG
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH----h--CCEEEEeCCCCHHHHHhc------CC
Confidence            55678999998 99999999999999987  8888887654332221    1  235677899887655432      13


Q ss_pred             CCccEEEECcc
Q 028056          106 GSLNLLINASG  116 (214)
Q Consensus       106 ~~vd~lv~nag  116 (214)
                      ...|++|++++
T Consensus        69 ~~~d~vi~~~~   79 (144)
T 2hmt_A           69 RNFEYVIVAIG   79 (144)
T ss_dssp             GGCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            46899999987

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.26  E-value=6e-07  Score=73.54  Aligned_cols=80  Identities=14%  Similarity=0.160  Sum_probs=56.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+++++|+||+|+||..++..+...|++  |+++++++++++.+.+    .+..   ..+|.++.+..+++.+...  ..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~--Vi~~~~~~~~~~~~~~----~g~~---~~~d~~~~~~~~~i~~~~~--~~  213 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGAT--VIGTVSTEEKAETARK----LGCH---HTINYSTQDFAEVVREITG--GK  213 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCE--EEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHHT--TC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH----cCCC---EEEECCCHHHHHHHHHHhC--CC
Confidence            4799999999999999999999999996  9999998765544332    2222   2347776554444433321  13


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1wly_A          214 GVDVVYDSIGK  224 (333)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCeEEEECCcH
Confidence            69999999985

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.25  E-value=4.9e-07  Score=73.85  Aligned_cols=79  Identities=16%  Similarity=0.157  Sum_probs=56.5

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+||+|+||..++..+...|++  |+++++++++++.+.+    .+..   ..+|.++.+..+++.+...  ..
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~--V~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~--~~  208 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAK--LIGTVGTAQKAQSALK----AGAW---QVINYREEDLVERLKEITG--GK  208 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHH----cCCC---EEEECCCccHHHHHHHHhC--CC
Confidence            4799999999999999999999999997  9999988765444332    2222   2247776554444433321  13


Q ss_pred             CccEEEECcc
Q 028056          107 SLNLLINASG  116 (214)
Q Consensus       107 ~vd~lv~nag  116 (214)
                      .+|++|+|+|
T Consensus       209 ~~D~vi~~~g  218 (327)
T 1qor_A          209 KVRVVYDSVG  218 (327)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCc
Confidence            6999999998

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.24  E-value=7.6e-07  Score=71.04  Aligned_cols=78  Identities=23%  Similarity=0.191  Sum_probs=55.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++|+|+ ||+|++++..|++.|++  |++++|+.++++.+.+.+...+ .+  ..+|+   +++       .+
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~--V~v~~R~~~~~~~la~~~~~~~-~~--~~~~~---~~~-------~~  178 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCA--VTITNRTVSRAEELAKLFAHTG-SI--QALSM---DEL-------EG  178 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSHHHHHHHHHHTGGGS-SE--EECCS---GGG-------TT
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHHhhccC-Ce--eEecH---HHh-------cc
Confidence            3578999999998 79999999999999975  9999998876655444332211 21  12333   221       11


Q ss_pred             HcCCccEEEECccccC
Q 028056          104 KYGSLNLLINASGILS  119 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~  119 (214)
                        ++.|++|||++...
T Consensus       179 --~~~DivVn~t~~~~  192 (271)
T 1nyt_A          179 --HEFDLIINATSSGI  192 (271)
T ss_dssp             --CCCSEEEECCSCGG
T ss_pred             --CCCCEEEECCCCCC
Confidence              58999999998754

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.19  E-value=2e-06  Score=61.41  Aligned_cols=75  Identities=20%  Similarity=0.218  Sum_probs=57.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +++.++|+|+ |.+|..+++.|.+.|++  |++++++++..+.+.+      ..+.++.+|.++++.++++      ...
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~--V~~id~~~~~~~~~~~------~~~~~~~gd~~~~~~l~~~------~~~   69 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKK--VLAVDKSKEKIELLED------EGFDAVIADPTDESFYRSL------DLE   69 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCC--EEEEESCHHHHHHHHH------TTCEEEECCTTCHHHHHHS------CCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCe--EEEEECCHHHHHHHHH------CCCcEEECCCCCHHHHHhC------Ccc
Confidence            4568999998 77999999999999998  9999998765443322      2366788999998876543      224


Q ss_pred             CccEEEECcc
Q 028056          107 SLNLLINASG  116 (214)
Q Consensus       107 ~vd~lv~nag  116 (214)
                      +.|++|.+.+
T Consensus        70 ~~d~vi~~~~   79 (141)
T 3llv_A           70 GVSAVLITGS   79 (141)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEecC
Confidence            6899988776

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.19  E-value=7.2e-07  Score=73.35  Aligned_cols=81  Identities=16%  Similarity=0.152  Sum_probs=57.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+|++|++|..++..+...|++  |+++++++++++.+.+   +.+..   ..+|.++.+++.+.+.++..  +
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~--V~~~~~~~~~~~~~~~---~~g~~---~~~d~~~~~~~~~~~~~~~~--~  224 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCY--VVGSAGSKEKVDLLKT---KFGFD---DAFNYKEESDLTAALKRCFP--N  224 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHH---TSCCS---EEEETTSCSCSHHHHHHHCT--T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---HcCCc---eEEecCCHHHHHHHHHHHhC--C
Confidence            4799999999999999999999889986  9999988765443321   22332   22477665444444544432  4


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+|+|.
T Consensus       225 ~~d~vi~~~g~  235 (345)
T 2j3h_A          225 GIDIYFENVGG  235 (345)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCH
Confidence            79999999984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.17  E-value=1.5e-06  Score=71.86  Aligned_cols=80  Identities=19%  Similarity=0.209  Sum_probs=55.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+|++|+||..++..+...|++  |+++++++++++.+    .+.+..   ..+|..+.+..+++.+.. . ..
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~----~~~ga~---~~~d~~~~~~~~~~~~~~-~-~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLK--ILGTAGTEEGQKIV----LQNGAH---EVFNHREVNYIDKIKKYV-G-EK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHH----HHTTCS---EEEETTSTTHHHHHHHHH-C-TT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCE--EEEEeCChhHHHHH----HHcCCC---EEEeCCCchHHHHHHHHc-C-CC
Confidence            4799999999999999999999999996  99999887654432    222332   234776654433333222 1 13


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+|+|.
T Consensus       239 ~~D~vi~~~G~  249 (351)
T 1yb5_A          239 GIDIIIEMLAN  249 (351)
T ss_dssp             CEEEEEESCHH
T ss_pred             CcEEEEECCCh
Confidence            69999999984

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.17  E-value=1.2e-06  Score=72.53  Aligned_cols=80  Identities=16%  Similarity=0.148  Sum_probs=56.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+||+|+||..++..+...|++  |+++++++++++.+.+    .+..   ..+|.++.+..+++.+...  ..
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~--~~  230 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAI--PLVTAGSQKKLQMAEK----LGAA---AGFNYKKEDFSEATLKFTK--GA  230 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHTT--TS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHH----cCCc---EEEecCChHHHHHHHHHhc--CC
Confidence            4799999999999999999999999997  9999988766544322    2322   2356666544433332221  13


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+|+|.
T Consensus       231 ~~d~vi~~~G~  241 (354)
T 2j8z_A          231 GVNLILDCIGG  241 (354)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCc
Confidence            69999999984

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.15  E-value=1.3e-06  Score=72.29  Aligned_cols=81  Identities=12%  Similarity=0.105  Sum_probs=55.0

Q ss_pred             cC--cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           27 KG--GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        27 ~~--k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .|  ++++|+|++|+||..++..+...|+. .|+++++++++.+.+.+.   .+..   ..+|.++.+..+ .+.+... 
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~-~Vi~~~~~~~~~~~~~~~---~g~~---~~~d~~~~~~~~-~~~~~~~-  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCS-RVVGICGTHEKCILLTSE---LGFD---AAINYKKDNVAE-QLRESCP-  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHHHT---SCCS---EEEETTTSCHHH-HHHHHCT-
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCC-eEEEEeCCHHHHHHHHHH---cCCc---eEEecCchHHHH-HHHHhcC-
Confidence            46  89999999999999999999999993 399999887554433321   2322   235776643322 2222222 


Q ss_pred             cCCccEEEECccc
Q 028056          105 YGSLNLLINASGI  117 (214)
Q Consensus       105 ~~~vd~lv~nag~  117 (214)
                       +.+|++|+|+|.
T Consensus       229 -~~~d~vi~~~G~  240 (357)
T 2zb4_A          229 -AGVDVYFDNVGG  240 (357)
T ss_dssp             -TCEEEEEESCCH
T ss_pred             -CCCCEEEECCCH
Confidence             269999999983

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.10  E-value=2.6e-06  Score=68.33  Aligned_cols=83  Identities=20%  Similarity=0.141  Sum_probs=58.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++|+|+ ||+|++++..|++.|+. .|.+++|+.++.+.+.+.+......+.....+..+.   .+.+.    
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~-~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l~----  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQ-KLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVIA----  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHHH----
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHHh----
Confidence            3578999999998 79999999999999996 599999998877665554433222233334444333   22222    


Q ss_pred             HcCCccEEEECcccc
Q 028056          104 KYGSLNLLINASGIL  118 (214)
Q Consensus       104 ~~~~vd~lv~nag~~  118 (214)
                         ..|+|||+....
T Consensus       194 ---~~DiVInaTp~G  205 (283)
T 3jyo_A          194 ---AADGVVNATPMG  205 (283)
T ss_dssp             ---HSSEEEECSSTT
T ss_pred             ---cCCEEEECCCCC
Confidence               469999998654

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.08  E-value=2.5e-06  Score=69.91  Aligned_cols=80  Identities=13%  Similarity=0.137  Sum_probs=55.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+|++|+||..++..+...|++  |+++++++++.+.+.   .+.+..   ...|..+.+..+.+.+ ..  .+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~---~~~g~~---~~~~~~~~~~~~~~~~-~~--~~  217 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCR--VVGIAGGAEKCRFLV---EELGFD---GAIDYKNEDLAAGLKR-EC--PK  217 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHH---HTTCCS---EEEETTTSCHHHHHHH-HC--TT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH---HHcCCC---EEEECCCHHHHHHHHH-hc--CC
Confidence            4899999999999999999988899996  999998876654431   222332   2246665443333322 22  24


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+|+|.
T Consensus       218 ~~d~vi~~~g~  228 (336)
T 4b7c_A          218 GIDVFFDNVGG  228 (336)
T ss_dssp             CEEEEEESSCH
T ss_pred             CceEEEECCCc
Confidence            79999999983

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.01  E-value=4.2e-06  Score=68.92  Aligned_cols=81  Identities=12%  Similarity=0.153  Sum_probs=55.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .+++++|+|++++||..++..+... |++  |+++++++++++.+.+    .+..   ...|.++.+..++ +.++.+. 
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~--Vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~-~~~~~~~-  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGAT--IIGVDVREEAVEAAKR----AGAD---YVINASMQDPLAE-IRRITES-  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCE--EEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHH-HHHHTTT-
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCe--EEEEcCCHHHHHHHHH----hCCC---EEecCCCccHHHH-HHHHhcC-
Confidence            5799999999999999999998888 996  9999988766544322    2322   1246665443322 2222211 


Q ss_pred             CCccEEEECcccc
Q 028056          106 GSLNLLINASGIL  118 (214)
Q Consensus       106 ~~vd~lv~nag~~  118 (214)
                      +.+|++|+|+|..
T Consensus       239 ~~~d~vi~~~g~~  251 (347)
T 1jvb_A          239 KGVDAVIDLNNSE  251 (347)
T ss_dssp             SCEEEEEESCCCH
T ss_pred             CCceEEEECCCCH
Confidence            4799999999853

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.99  E-value=1.3e-05  Score=65.19  Aligned_cols=85  Identities=18%  Similarity=0.150  Sum_probs=56.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC---CcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN---GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .++++|+++|+|+ ||.|++++..|++.|++ .|.+.+|+.+   +++.+.+.+.... .......+..+.+...+.+. 
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~-~v~v~nRt~~~~~~a~~la~~~~~~~-~~~v~~~~~~~l~~~~~~l~-  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIK-EIKLFNRKDDFFEKAVAFAKRVNENT-DCVVTVTDLADQHAFTEALA-  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEECSSTHHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHHH-
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCC-EEEEEECCCchHHHHHHHHHHhhhcc-CcceEEechHhhhhhHhhcc-
Confidence            5678999999997 89999999999999996 5999999944   4444333332211 12233446655433222222 


Q ss_pred             HHHHcCCccEEEECcccc
Q 028056          101 IKEKYGSLNLLINASGIL  118 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~  118 (214)
                            ..|+|||+....
T Consensus       220 ------~~DiIINaTp~G  231 (312)
T 3t4e_A          220 ------SADILTNGTKVG  231 (312)
T ss_dssp             ------HCSEEEECSSTT
T ss_pred             ------CceEEEECCcCC
Confidence                  569999998654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.91  E-value=1.1e-05  Score=66.57  Aligned_cols=79  Identities=14%  Similarity=0.194  Sum_probs=55.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+||+|+||..++..+...|++  |+++++++++++.+.+    .+...   ..|..+.+..+.+.+ ..  .+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~----lGa~~---~~~~~~~~~~~~~~~-~~--~~  234 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAE--VYATAGSTGKCEACER----LGAKR---GINYRSEDFAAVIKA-ET--GQ  234 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHH----HTCSE---EEETTTSCHHHHHHH-HH--SS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHh----cCCCE---EEeCCchHHHHHHHH-Hh--CC
Confidence            4799999999999999999999999997  9999998876554433    23221   235555443333333 22  35


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+|+|.
T Consensus       235 g~Dvvid~~g~  245 (353)
T 4dup_A          235 GVDIILDMIGA  245 (353)
T ss_dssp             CEEEEEESCCG
T ss_pred             CceEEEECCCH
Confidence            79999999984

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.91  E-value=1.1e-05  Score=66.18  Aligned_cols=149  Identities=10%  Similarity=-0.018  Sum_probs=83.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCC-----cEEEEeecC----CCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDK-----GCVIATCRN----PNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~-----~~vi~~~r~----~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      .+|+||||+|.+|.+++..|+..|.-     ..|++++++    +++++. ..++... ....   ..|+....+..+.+
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~-~~~~---~~~i~~~~~~~~al   81 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC-AFPL---LAGMTAHADPMTAF   81 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT-TCTT---EEEEEEESSHHHHT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh-cccc---cCcEEEecCcHHHh
Confidence            57999999999999999999998851     148888887    332322 1122111 0111   12444333333333


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                             ...|++||.||...        .+-  .+.   .+.+..|+..+..+++.+..+-  .+.      ..+|++|
T Consensus        82 -------~~aD~Vi~~ag~~~--------~~g--~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~------a~ii~~S  133 (329)
T 1b8p_A           82 -------KDADVALLVGARPR--------GPG--MER---KDLLEANAQIFTVQGKAIDAVA--SRN------IKVLVVG  133 (329)
T ss_dssp             -------TTCSEEEECCCCCC--------CTT--CCH---HHHHHHHHHHHHHHHHHHHHHS--CTT------CEEEECS
T ss_pred             -------CCCCEEEEeCCCCC--------CCC--CCH---HHHHHHHHHHHHHHHHHHHHhc--CCC------eEEEEcc
Confidence                   36899999999753        111  111   2346677777766666665431  122      2899998


Q ss_pred             cCcccCC-----CC-CCCCcchhhhhHHHHHHHHHHh
Q 028056          179 ARVGSIG-----DN-RLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       179 s~~~~~~-----~~-~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      .......     .. .+|....|+.++.--..+.+.+
T Consensus       134 NPv~~~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~l  170 (329)
T 1b8p_A          134 NPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQI  170 (329)
T ss_dssp             SSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHcCCCCHHHEEEeecHHHHHHHHHH
Confidence            8653210     00 1344445777765444444444

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.89  E-value=1e-05  Score=66.51  Aligned_cols=79  Identities=14%  Similarity=0.143  Sum_probs=54.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+++++|+|++|++|..++..+...|++  |+++++++++++.+.+    .+...   .+|.++.+ +.+.+.++.+ ..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~--Vi~~~~~~~~~~~~~~----~ga~~---~~d~~~~~-~~~~~~~~~~-~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGAR--VIATAGSEDKLRRAKA----LGADE---TVNYTHPD-WPKEVRRLTG-GK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCE--EEEEESSHHHHHHHHH----HTCSE---EEETTSTT-HHHHHHHHTT-TT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHh----cCCCE---EEcCCccc-HHHHHHHHhC-CC
Confidence            4789999999999999999999989996  9999988766554332    23221   24776653 2222222211 13


Q ss_pred             CccEEEECcc
Q 028056          107 SLNLLINASG  116 (214)
Q Consensus       107 ~vd~lv~nag  116 (214)
                      .+|++|+|+|
T Consensus       235 ~~d~vi~~~g  244 (343)
T 2eih_A          235 GADKVVDHTG  244 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.89  E-value=1.5e-05  Score=65.29  Aligned_cols=80  Identities=24%  Similarity=0.216  Sum_probs=55.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+|+++++|..++..+...|++  |+++++++++++.+.+.    +...   ..|..+.+..+++.+.. . ..
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~l----ga~~---~~~~~~~~~~~~~~~~~-~-~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFR--LIAVTRNNKHTEELLRL----GAAY---VIDTSTAPLYETVMELT-N-GI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCE--EEEEESSSTTHHHHHHH----TCSE---EEETTTSCHHHHHHHHT-T-TS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHhC----CCcE---EEeCCcccHHHHHHHHh-C-CC
Confidence            4799999999999999999888889997  99999988876654432    3322   23555443322222211 1 13


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+|+|.
T Consensus       213 g~Dvvid~~g~  223 (340)
T 3gms_A          213 GADAAIDSIGG  223 (340)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            69999999984

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.87  E-value=4e-05  Score=62.07  Aligned_cols=92  Identities=16%  Similarity=0.112  Sum_probs=61.8

Q ss_pred             cccCcE-EEEecCCC-----------------c-hhHHHHHHHHhcCCCcEEEEeecCCCCccccc---------chhh-
Q 028056           25 KWKGGV-SLVQGASR-----------------G-IGLEFAKQLLEKNDKGCVIATCRNPNGATGLL---------DLKN-   75 (214)
Q Consensus        25 ~l~~k~-vlItG~s~-----------------g-iG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~---------~~~~-   75 (214)
                      +++||+ ||||+|..                 | +|.++|+.++++|+.  |+++.+... +....         +.+. 
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~--V~lv~g~~s-l~p~~r~~~~~~~~~~~~~  109 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYG--VLFLYRARS-AFPYAHRFPPQTWLSALRP  109 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCE--EEEEEETTS-CCTTGGGSCHHHHHHHCEE
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCE--EEEEecCCC-cCcchhccCccchhhhhcc
Confidence            467877 99998765                 5 999999999999998  888887543 22111         0000 


Q ss_pred             --cCCCceeEEEecCCCHHHHHHHHHHH------------------------------HHHcCCccEEEECccccC
Q 028056           76 --RFPERLDVLQLDLTVESTIEASAKSI------------------------------KEKYGSLNLLINASGILS  119 (214)
Q Consensus        76 --~~~~~~~~~~~Dl~~~~~v~~~~~~~------------------------------~~~~~~vd~lv~nag~~~  119 (214)
                        ..+..+..+..|+.+.+++.+.+.+.                              .+.++..|++|.+|++.-
T Consensus       110 ~~~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          110 SGPALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             CCC-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             ccccccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence              01223456677777766666665443                              234578999999999865

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.85  E-value=1.4e-05  Score=63.69  Aligned_cols=78  Identities=17%  Similarity=0.199  Sum_probs=54.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++|+|+ ||+|++++..|++.|.+  |.+++|+.++++.+.+.....+ .+.  .+|+   +++.       +
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~--v~v~~R~~~~a~~l~~~~~~~~-~~~--~~~~---~~~~-------~  178 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQN--IVLANRTFSKTKELAERFQPYG-NIQ--AVSM---DSIP-------L  178 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCE--EEEEESSHHHHHHHHHHHGGGS-CEE--EEEG---GGCC-------C
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHccccC-CeE--EeeH---HHhc-------c
Confidence            3578999999998 79999999999999965  9999999877665544433211 222  2333   1110       1


Q ss_pred             HcCCccEEEECccccC
Q 028056          104 KYGSLNLLINASGILS  119 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~  119 (214)
                        +..|++||+++...
T Consensus       179 --~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 --QTYDLVINATSAGL  192 (272)
T ss_dssp             --SCCSEEEECCCC--
T ss_pred             --CCCCEEEECCCCCC
Confidence              47899999998754

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.83  E-value=3.1e-05  Score=56.00  Aligned_cols=78  Identities=15%  Similarity=0.171  Sum_probs=55.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC-CCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .++.++|.|+ |.+|..+++.|.+.|.+  |+++++++ +..+.+.+.   ....+.++.+|.++++.+++.      ..
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~--V~vid~~~~~~~~~~~~~---~~~~~~~i~gd~~~~~~l~~a------~i   69 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQN--VTVISNLPEDDIKQLEQR---LGDNADVIPGDSNDSSVLKKA------GI   69 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCC--EEEEECCCHHHHHHHHHH---HCTTCEEEESCTTSHHHHHHH------TT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCC--EEEEECCChHHHHHHHHh---hcCCCeEEEcCCCCHHHHHHc------Ch
Confidence            3467888886 99999999999999998  88888874 322222222   123577889999998876543      12


Q ss_pred             CCccEEEECcc
Q 028056          106 GSLNLLINASG  116 (214)
Q Consensus       106 ~~vd~lv~nag  116 (214)
                      ...|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (153)
T 1id1_A           70 DRCRAILALSD   80 (153)
T ss_dssp             TTCSEEEECSS
T ss_pred             hhCCEEEEecC
Confidence            36788888875

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.83  E-value=5.3e-05  Score=54.93  Aligned_cols=78  Identities=13%  Similarity=0.050  Sum_probs=55.1

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +..+++++|.|+ |.+|..+++.|.+.|.+  |++++++++..+.+.+   .  .....+..|.++.+.+.+.      .
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~--V~vid~~~~~~~~~~~---~--~g~~~~~~d~~~~~~l~~~------~   81 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHS--VVVVDKNEYAFHRLNS---E--FSGFTVVGDAAEFETLKEC------G   81 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCGGGGGGSCT---T--CCSEEEESCTTSHHHHHTT------T
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHHHHHh---c--CCCcEEEecCCCHHHHHHc------C
Confidence            345678999986 99999999999999986  9999998876543321   1  1344667888876543321      1


Q ss_pred             cCCccEEEECcc
Q 028056          105 YGSLNLLINASG  116 (214)
Q Consensus       105 ~~~vd~lv~nag  116 (214)
                      ....|++|.+.+
T Consensus        82 ~~~ad~Vi~~~~   93 (155)
T 2g1u_A           82 MEKADMVFAFTN   93 (155)
T ss_dssp             GGGCSEEEECSS
T ss_pred             cccCCEEEEEeC
Confidence            236799998886

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.82  E-value=1.7e-05  Score=67.46  Aligned_cols=85  Identities=21%  Similarity=0.250  Sum_probs=57.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEe--cCC---------CHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL--DLT---------VESTIE   95 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~--Dl~---------~~~~v~   95 (214)
                      .|++|+|+|++|+||..++..+...|++  |+++++++++++.+.    +.+....+...  |+.         +.+++.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~--vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGI--PVAVVSSAQKEAAVR----ALGCDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHH----HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHH----hcCCCEEEecccccccccccccccccchhhh
Confidence            4799999999999999999888889997  888888776544332    23333222211  221         123445


Q ss_pred             HHHHHHHHHcC-CccEEEECccc
Q 028056           96 ASAKSIKEKYG-SLNLLINASGI  117 (214)
Q Consensus        96 ~~~~~~~~~~~-~vd~lv~nag~  117 (214)
                      ++.+++.+..+ .+|++|+++|.
T Consensus       294 ~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          294 KLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHSSCCSEEEECSCH
T ss_pred             HHHHHHHHHhCCCceEEEECCCc
Confidence            55666665444 69999999984

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.80  E-value=1.7e-05  Score=64.08  Aligned_cols=80  Identities=16%  Similarity=0.172  Sum_probs=54.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++++++|+|+ ||+|++++..|++.|+. .|.+++|+.++++.+.+.+.....  ..+  +   .++       +.+
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~-~V~v~nR~~~ka~~la~~~~~~~~--~~~--~---~~~-------~~~  200 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAE-RIDMANRTVEKAERLVREGDERRS--AYF--S---LAE-------AET  200 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCS-EEEEECSSHHHHHHHHHHSCSSSC--CEE--C---HHH-------HHH
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHhhhccC--cee--e---HHH-------HHh
Confidence            3578999999998 79999999999999984 499999988765554433321100  111  1   122       223


Q ss_pred             HcCCccEEEECccccC
Q 028056          104 KYGSLNLLINASGILS  119 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~  119 (214)
                      .....|+|||+.+...
T Consensus       201 ~~~~aDivIn~t~~~~  216 (297)
T 2egg_A          201 RLAEYDIIINTTSVGM  216 (297)
T ss_dssp             TGGGCSEEEECSCTTC
T ss_pred             hhccCCEEEECCCCCC
Confidence            3357899999998654

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.79  E-value=1.2e-05  Score=65.62  Aligned_cols=80  Identities=16%  Similarity=0.184  Sum_probs=54.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+||+|++|..++..+...|++  |+++++++++++.+.+    .+...   ..|..+.+..+++.+.. . ..
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~----~Ga~~---~~~~~~~~~~~~~~~~~-~-~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAK--LIGTVSSPEKAAHAKA----LGAWE---TIDYSHEDVAKRVLELT-D-GK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHHH----HTCSE---EEETTTSCHHHHHHHHT-T-TC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH----cCCCE---EEeCCCccHHHHHHHHh-C-CC
Confidence            4799999999999999999988889997  9999988766554332    23221   23555544333322222 1 13


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+|+|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            69999999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.79  E-value=1.3e-05  Score=65.47  Aligned_cols=80  Identities=18%  Similarity=0.208  Sum_probs=54.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+||+|++|..++..+...|++  |+++++++++++.+.    +.+...   ..|..+.+..+.+.+.. . ..
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~----~~ga~~---~~~~~~~~~~~~~~~~~-~-~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAH--TIAVASTDEKLKIAK----EYGAEY---LINASKEDILRQVLKFT-N-GK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHH----HTTCSE---EEETTTSCHHHHHHHHT-T-TS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHH----HcCCcE---EEeCCCchHHHHHHHHh-C-CC
Confidence            5799999999999999999988889997  999998776554332    233321   23555443333222211 1 13


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+|+|.
T Consensus       217 g~D~vid~~g~  227 (334)
T 3qwb_A          217 GVDASFDSVGK  227 (334)
T ss_dssp             CEEEEEECCGG
T ss_pred             CceEEEECCCh
Confidence            69999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.72  E-value=7.6e-05  Score=61.02  Aligned_cols=122  Identities=16%  Similarity=0.071  Sum_probs=69.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      .+++||||+|.+|..++..|+..|.-..|++++++++ .....++.. ...... +.. +++..+..+.+       ...
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~-~~~~~~-v~~-~~~t~d~~~al-------~ga   77 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISH-MDTGAV-VRG-FLGQQQLEAAL-------TGM   77 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHT-SCSSCE-EEE-EESHHHHHHHH-------TTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhc-ccccce-EEE-EeCCCCHHHHc-------CCC
Confidence            4799999999999999999999883113888888765 111222221 111111 111 22233443333       378


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      |++|+++|...        .+-.  +   -...+..|+.++..+++.+..+-   +.      ..++++|...+.
T Consensus        78 DvVi~~ag~~~--------~~g~--~---r~dl~~~N~~~~~~i~~~i~~~~---p~------~~viv~SNPv~~  130 (326)
T 1smk_A           78 DLIIVPAGVPR--------KPGM--T---RDDLFKINAGIVKTLCEGIAKCC---PR------AIVNLISNPVNS  130 (326)
T ss_dssp             SEEEECCCCCC--------CSSC--C---CSHHHHHHHHHHHHHHHHHHHHC---TT------SEEEECCSSHHH
T ss_pred             CEEEEcCCcCC--------CCCC--C---HHHHHHHHHHHHHHHHHHHHhhC---CC------eEEEEECCchHH
Confidence            99999999653        1111  1   11236677777777776665432   22      266666555443

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.72  E-value=3.8e-05  Score=63.66  Aligned_cols=74  Identities=22%  Similarity=0.152  Sum_probs=55.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +..+|+|.|+ |++|+.+++.|++. .+  |.+.+++.++++.+.       ..+..+.+|++|.+++.++++       
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~~~-~~--v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~~-------   76 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLKDE-FD--VYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVMK-------   76 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTTT-SE--EEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHHT-------
T ss_pred             CccEEEEECC-CHHHHHHHHHHhcC-CC--eEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHHh-------
Confidence            3346999998 99999999988764 54  888888876544432       235567899999988877665       


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      ..|+|||+++..
T Consensus        77 ~~DvVi~~~p~~   88 (365)
T 3abi_A           77 EFELVIGALPGF   88 (365)
T ss_dssp             TCSEEEECCCGG
T ss_pred             CCCEEEEecCCc
Confidence            679999998754

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.71  E-value=8.2e-05  Score=61.16  Aligned_cols=79  Identities=13%  Similarity=0.045  Sum_probs=53.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +++++|+||+|++|..++..+...|++  |+++++++++++.+.+    .+... .  .|..+.+-.+++.+....  ..
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~~----~Ga~~-~--~~~~~~~~~~~v~~~~~~--~g  233 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFR--PIVTVRRDEQIALLKD----IGAAH-V--LNEKAPDFEATLREVMKA--EQ  233 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCE--EEEEESCGGGHHHHHH----HTCSE-E--EETTSTTHHHHHHHHHHH--HC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH----cCCCE-E--EECCcHHHHHHHHHHhcC--CC
Confidence            489999999999999999888889996  9999988877554432    23221 2  355443333332222222  26


Q ss_pred             ccEEEECccc
Q 028056          108 LNLLINASGI  117 (214)
Q Consensus       108 vd~lv~nag~  117 (214)
                      +|++|+++|.
T Consensus       234 ~D~vid~~g~  243 (349)
T 3pi7_A          234 PRIFLDAVTG  243 (349)
T ss_dssp             CCEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999983

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.69  E-value=5e-05  Score=62.32  Aligned_cols=77  Identities=23%  Similarity=0.311  Sum_probs=52.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  105 (214)
                      .|+++||+|++|+||..++..+...|++  |+++++++++.+.+.+    .+... .+  |..  +++.   +++.+.. 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~----~ga~~-v~--~~~--~~~~---~~v~~~~~  224 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAK--VIAVVNRTAATEFVKS----VGADI-VL--PLE--EGWA---KAVREATG  224 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHH----HTCSE-EE--ESS--TTHH---HHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHh----cCCcE-Ee--cCc--hhHH---HHHHHHhC
Confidence            4899999999999999999988889996  9999998876554333    23322 22  333  2222   3333322 


Q ss_pred             -CCccEEEECccc
Q 028056          106 -GSLNLLINASGI  117 (214)
Q Consensus       106 -~~vd~lv~nag~  117 (214)
                       ..+|++|+|+|.
T Consensus       225 ~~g~Dvvid~~g~  237 (342)
T 4eye_A          225 GAGVDMVVDPIGG  237 (342)
T ss_dssp             TSCEEEEEESCC-
T ss_pred             CCCceEEEECCch
Confidence             269999999984

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.69  E-value=4.9e-05  Score=62.98  Aligned_cols=78  Identities=24%  Similarity=0.199  Sum_probs=54.8

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++++++|+|+ |++|+.++..+...|++  |++++|++++++.+.+...   ..+.   ++..+.+++.+.+      
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~--V~v~dr~~~r~~~~~~~~~---~~~~---~~~~~~~~~~~~~------  228 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQ--VQIFDINVERLSYLETLFG---SRVE---LLYSNSAEIETAV------  228 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHG---GGSE---EEECCHHHHHHHH------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHhhC---ceeE---eeeCCHHHHHHHH------
Confidence            367799999999 99999999999999996  9999998876655443322   1221   2223344443322      


Q ss_pred             cCCccEEEECcccc
Q 028056          105 YGSLNLLINASGIL  118 (214)
Q Consensus       105 ~~~vd~lv~nag~~  118 (214)
                       ...|++|++++..
T Consensus       229 -~~~DvVI~~~~~~  241 (361)
T 1pjc_A          229 -AEADLLIGAVLVP  241 (361)
T ss_dssp             -HTCSEEEECCCCT
T ss_pred             -cCCCEEEECCCcC
Confidence             2689999999864

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.68  E-value=5.1e-05  Score=53.49  Aligned_cols=75  Identities=20%  Similarity=0.243  Sum_probs=52.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +..++|+|+ |.+|..+++.|.+.|.+  |++++++++..+.+.   ...  .+.++..|.++.+.+.+.      ....
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~--v~~~d~~~~~~~~~~---~~~--~~~~~~~d~~~~~~l~~~------~~~~   69 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHD--IVLIDIDKDICKKAS---AEI--DALVINGDCTKIKTLEDA------GIED   69 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH---HHC--SSEEEESCTTSHHHHHHT------TTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHHHHH---Hhc--CcEEEEcCCCCHHHHHHc------Cccc
Confidence            357889987 99999999999999987  888898765433222   111  345677898887654321      1346


Q ss_pred             ccEEEECcc
Q 028056          108 LNLLINASG  116 (214)
Q Consensus       108 vd~lv~nag  116 (214)
                      .|++|.+.+
T Consensus        70 ~d~vi~~~~   78 (140)
T 1lss_A           70 ADMYIAVTG   78 (140)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEeeC
Confidence            899999875

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.68  E-value=6.7e-05  Score=60.04  Aligned_cols=77  Identities=23%  Similarity=0.323  Sum_probs=54.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++|+|+ ||+|++++..|++.|+. .|.+++|+.++.+.+.+.+...+ .+...  ++.+   +.        
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~-~v~v~~R~~~~a~~la~~~~~~~-~~~~~--~~~~---l~--------  185 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPA-SITVTNRTFAKAEQLAELVAAYG-EVKAQ--AFEQ---LK--------  185 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCS-EEEEEESSHHHHHHHHHHHGGGS-CEEEE--EGGG---CC--------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCC-eEEEEECCHHHHHHHHHHhhccC-CeeEe--eHHH---hc--------
Confidence            4678999999998 69999999999999974 59999999877666555443322 23333  2211   10        


Q ss_pred             HcCCccEEEECcccc
Q 028056          104 KYGSLNLLINASGIL  118 (214)
Q Consensus       104 ~~~~vd~lv~nag~~  118 (214)
                        ...|+|||+....
T Consensus       186 --~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 --QSYDVIINSTSAS  198 (281)
T ss_dssp             --SCEEEEEECSCCC
T ss_pred             --CCCCEEEEcCcCC
Confidence              3689999988654

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.67  E-value=4.2e-05  Score=60.93  Aligned_cols=77  Identities=17%  Similarity=0.173  Sum_probs=54.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|+++|+|+ ||+|++++..|++.|+. .|.+++|+.++.+.+.+.+..  ..+..+  ++.+..          +
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~-~v~i~~R~~~~a~~la~~~~~--~~~~~~--~~~~l~----------~  179 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPS-ELVIANRDMAKALALRNELDH--SRLRIS--RYEALE----------G  179 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCS-EEEEECSCHHHHHHHHHHHCC--TTEEEE--CSGGGT----------T
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcc--CCeeEe--eHHHhc----------c
Confidence            4678999999998 69999999999999975 599999998776665544432  223332  222211          1


Q ss_pred             HcCCccEEEECcccc
Q 028056          104 KYGSLNLLINASGIL  118 (214)
Q Consensus       104 ~~~~vd~lv~nag~~  118 (214)
                        ...|+|||+....
T Consensus       180 --~~~DivInaTp~g  192 (272)
T 3pwz_A          180 --QSFDIVVNATSAS  192 (272)
T ss_dssp             --CCCSEEEECSSGG
T ss_pred             --cCCCEEEECCCCC
Confidence              3789999998653

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.64  E-value=3.8e-05  Score=63.60  Aligned_cols=76  Identities=18%  Similarity=0.196  Sum_probs=51.9

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC---CCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP---NGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .++|++|+|+|+ |++|..++..+...|++  |+++++++   ++.+.+    .+.+.  ..+  | .+  ++.+.+.+ 
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~--Vi~~~~~~~~~~~~~~~----~~~ga--~~v--~-~~--~~~~~~~~-  242 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLE--VWMANRREPTEVEQTVI----EETKT--NYY--N-SS--NGYDKLKD-  242 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCE--EEEEESSCCCHHHHHHH----HHHTC--EEE--E-CT--TCSHHHHH-
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEeCCccchHHHHHH----HHhCC--cee--c-hH--HHHHHHHH-
Confidence            344999999999 99999999988889996  99999887   443322    22232  223  5 44  22222222 


Q ss_pred             HHHcCCccEEEECccc
Q 028056          102 KEKYGSLNLLINASGI  117 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~  117 (214)
                      . . +.+|++|+++|.
T Consensus       243 ~-~-~~~d~vid~~g~  256 (366)
T 2cdc_A          243 S-V-GKFDVIIDATGA  256 (366)
T ss_dssp             H-H-CCEEEEEECCCC
T ss_pred             h-C-CCCCEEEECCCC
Confidence            2 2 579999999985

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.62  E-value=6.1e-05  Score=60.16  Aligned_cols=46  Identities=15%  Similarity=0.110  Sum_probs=38.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccccc
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL   71 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~   71 (214)
                      .++++|+++|+|+ ||+|++++..|++.|+. .|.+++|+.++.+.+.
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~-~v~v~~R~~~~a~~la  158 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRP-TLTVANRTMSRFNNWS  158 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCS-CCEEECSCGGGGTTCC
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHH
Confidence            4578999999997 79999999999999994 3899999987765543

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.62  E-value=3.7e-05  Score=57.22  Aligned_cols=79  Identities=16%  Similarity=0.063  Sum_probs=56.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++.++.++|.| .|.+|..+++.|.+. |.+  |+++++++++.+.+.    +.  .+..+.+|.++++.+.++     
T Consensus        35 ~~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~--V~vid~~~~~~~~~~----~~--g~~~~~gd~~~~~~l~~~-----  100 (183)
T 3c85_A           35 INPGHAQVLILG-MGRIGTGAYDELRARYGKI--SLGIEIREEAAQQHR----SE--GRNVISGDATDPDFWERI-----  100 (183)
T ss_dssp             BCCTTCSEEEEC-CSHHHHHHHHHHHHHHCSC--EEEEESCHHHHHHHH----HT--TCCEEECCTTCHHHHHTB-----
T ss_pred             cCCCCCcEEEEC-CCHHHHHHHHHHHhccCCe--EEEEECCHHHHHHHH----HC--CCCEEEcCCCCHHHHHhc-----
Confidence            446677788888 599999999999999 998  999999876543322    22  355677899887654322     


Q ss_pred             HHcCCccEEEECcc
Q 028056          103 EKYGSLNLLINASG  116 (214)
Q Consensus       103 ~~~~~vd~lv~nag  116 (214)
                      ......|.+|.+.+
T Consensus       101 ~~~~~ad~vi~~~~  114 (183)
T 3c85_A          101 LDTGHVKLVLLAMP  114 (183)
T ss_dssp             CSCCCCCEEEECCS
T ss_pred             cCCCCCCEEEEeCC
Confidence            01246899988775

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.60  E-value=8.9e-05  Score=58.25  Aligned_cols=39  Identities=15%  Similarity=0.110  Sum_probs=34.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..+++++|+|.|+ ||+|..+++.|++.|.. .|.+++++.
T Consensus        27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~-~i~lvD~d~   65 (249)
T 1jw9_B           27 EALKDSRVLIVGL-GGLGCAASQYLASAGVG-NLTLLDFDT   65 (249)
T ss_dssp             HHHHHCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECCCB
T ss_pred             HHHhCCeEEEEee-CHHHHHHHHHHHHcCCC-eEEEEcCCC
Confidence            4577899999996 69999999999999986 688888876

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.57  E-value=7.8e-05  Score=63.62  Aligned_cols=85  Identities=18%  Similarity=0.176  Sum_probs=58.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEE--ec--------CCCHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ--LD--------LTVESTIEA   96 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~--~D--------l~~~~~v~~   96 (214)
                      .|.+|+|+|++|++|...+..+...|++  ++++++++++++.+.+    .+....+-.  .|        .++.+++++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~--vi~~~~~~~~~~~~~~----lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGAN--PICVVSSPQKAEICRA----MGAEAIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHH----HTCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCe--EEEEECCHHHHHHHHh----hCCcEEEecCcCcccccccccccchHHHHH
Confidence            4789999999999999999888888997  7888877765544322    232211111  11        245666777


Q ss_pred             HHHHHHHHc--CCccEEEECccc
Q 028056           97 SAKSIKEKY--GSLNLLINASGI  117 (214)
Q Consensus        97 ~~~~~~~~~--~~vd~lv~nag~  117 (214)
                      +.+++.+..  ..+|++|.++|.
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHhCCCCCcEEEEcCCc
Confidence            777777653  379999999984

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.57  E-value=7.7e-05  Score=62.19  Aligned_cols=78  Identities=18%  Similarity=0.068  Sum_probs=56.1

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++++++|+|+ |+||..+++.+...|++  |+++++++++++.+.+..   +..+   .+|..+.+++.+.+.     
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~--V~~~d~~~~~l~~~~~~~---g~~~---~~~~~~~~~l~~~l~-----  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGAT--VTVLDINIDKLRQLDAEF---CGRI---HTRYSSAYELEGAVK-----  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHT---TTSS---EEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHhc---CCee---EeccCCHHHHHHHHc-----
Confidence            578999999998 99999999999999996  999999876654433322   3322   234445555544432     


Q ss_pred             cCCccEEEECcccc
Q 028056          105 YGSLNLLINASGIL  118 (214)
Q Consensus       105 ~~~vd~lv~nag~~  118 (214)
                        ..|++|++++..
T Consensus       231 --~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 --RADLVIGAVLVP  242 (377)
T ss_dssp             --HCSEEEECCCCT
T ss_pred             --CCCEEEECCCcC
Confidence              579999998753

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.51  E-value=0.00012  Score=58.98  Aligned_cols=74  Identities=20%  Similarity=0.192  Sum_probs=51.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+|++|++|..++..+...|++  |+.+++++++.+.+.+    .+...   ..|..+.+++   .+++    +
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~~----~ga~~---~~~~~~~~~~---~~~~----~  188 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLR--VLAAASRPEKLALPLA----LGAEE---AATYAEVPER---AKAW----G  188 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCE--EEEEESSGGGSHHHHH----TTCSE---EEEGGGHHHH---HHHT----T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHh----cCCCE---EEECCcchhH---HHHh----c
Confidence            4799999999999999999988889986  9999998876554322    23221   1354441222   2222    5


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+ +|.
T Consensus       189 ~~d~vid-~g~  198 (302)
T 1iz0_A          189 GLDLVLE-VRG  198 (302)
T ss_dssp             SEEEEEE-CSC
T ss_pred             CceEEEE-CCH
Confidence            7899999 874

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.50  E-value=0.00012  Score=59.86  Aligned_cols=77  Identities=13%  Similarity=0.039  Sum_probs=53.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+|+ |++|..++..+...|++  |+++++++++++.+.    +.+..   ...|..+.+ +.+.+.++.   +
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~--Vi~~~~~~~~~~~~~----~lGa~---~~~d~~~~~-~~~~~~~~~---~  229 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLN--VVAVDIGDEKLELAK----ELGAD---LVVNPLKED-AAKFMKEKV---G  229 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCE--EEEECSCHHHHHHHH----HTTCS---EEECTTTSC-HHHHHHHHH---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHH----HCCCC---EEecCCCcc-HHHHHHHHh---C
Confidence            4789999999 78999999988889986  999998876655432    22332   124666543 222222222   5


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+++|.
T Consensus       230 ~~d~vid~~g~  240 (339)
T 1rjw_A          230 GVHAAVVTAVS  240 (339)
T ss_dssp             SEEEEEESSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.49  E-value=0.00015  Score=58.97  Aligned_cols=119  Identities=15%  Similarity=0.028  Sum_probs=69.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeec--CCCCccc-ccchh--hc-CCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR--NPNGATG-LLDLK--NR-FPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r--~~~~~~~-~~~~~--~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++||||+|.+|.+++..|+..|....++++++  ++++++. ..++.  .. .+.++.+...|  |  ++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chHH-------
Confidence            589999999999999999998886434888887  5433322 11111  11 11222222211  0  1111       


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      .+...|++||.||...        .+-  .+   ....+..|+.++..+++.+..+-     .     ..++++|....
T Consensus        71 al~gaD~Vi~~Ag~~~--------~~g--~~---r~dl~~~N~~i~~~i~~~i~~~~-----~-----~~vlv~SNPv~  126 (313)
T 1hye_A           71 IIDESDVVIITSGVPR--------KEG--MS---RMDLAKTNAKIVGKYAKKIAEIC-----D-----TKIFVITNPVD  126 (313)
T ss_dssp             GGTTCSEEEECCSCCC--------CTT--CC---HHHHHHHHHHHHHHHHHHHHHHC-----C-----CEEEECSSSHH
T ss_pred             HhCCCCEEEECCCCCC--------CCC--Cc---HHHHHHHHHHHHHHHHHHHHHhC-----C-----eEEEEecCcHH
Confidence            2237899999999653        111  11   12347788888877777776542     1     27777776544

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.45  E-value=9.3e-05  Score=61.20  Aligned_cols=79  Identities=18%  Similarity=0.178  Sum_probs=53.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+||+|++|..++..+...|++  |+++++++++++.+.+    .+... .  .|..+.+ +.+.+.+..  ..
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~--Vi~~~~~~~~~~~~~~----~Ga~~-~--~~~~~~~-~~~~~~~~~--~~  230 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCH--VIGTCSSDEKSAFLKS----LGCDR-P--INYKTEP-VGTVLKQEY--PE  230 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCE--EEEEESSHHHHHHHHH----TTCSE-E--EETTTSC-HHHHHHHHC--TT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHH----cCCcE-E--EecCChh-HHHHHHHhc--CC
Confidence            4789999999999999999988889996  9999988765443322    23322 2  3444432 222233221  13


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+|+|.
T Consensus       231 g~D~vid~~g~  241 (362)
T 2c0c_A          231 GVDVVYESVGG  241 (362)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCCEEEECCCH
Confidence            68999999974

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.42  E-value=0.0004  Score=55.78  Aligned_cols=91  Identities=11%  Similarity=0.066  Sum_probs=56.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC------------------cccccchhhcCCC--ceeE
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG------------------ATGLLDLKNRFPE--RLDV   83 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~------------------~~~~~~~~~~~~~--~~~~   83 (214)
                      -.+++++|+|.|+ ||+|..+++.|++.|.. ++.++|.+.-.                  .+.+.+.+.+...  ++..
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG-~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~  109 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIG-KLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV  109 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCC-EEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEE
Confidence            4578899999986 58999999999999987 78888876521                  1112222332222  4445


Q ss_pred             EEecCCCHHHHHHHHHHHHHH----cCCccEEEECcc
Q 028056           84 LQLDLTVESTIEASAKSIKEK----YGSLNLLINASG  116 (214)
Q Consensus        84 ~~~Dl~~~~~v~~~~~~~~~~----~~~vd~lv~nag  116 (214)
                      +..++++.+.++++++.+...    ....|+||.+..
T Consensus       110 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          110 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             ECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             ecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            555666655555555443221    125677766553

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.42  E-value=0.00018  Score=59.06  Aligned_cols=78  Identities=13%  Similarity=0.106  Sum_probs=52.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+||+|++|..++..+...|++  |+++++++++++.+.+    .+... .  .|..+  ++.+.+.++  ...
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~~----lGa~~-v--i~~~~--~~~~~~~~~--~~~  216 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLR--VITTASRNETIEWTKK----MGADI-V--LNHKE--SLLNQFKTQ--GIE  216 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEECCSHHHHHHHHH----HTCSE-E--ECTTS--CHHHHHHHH--TCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHh----cCCcE-E--EECCc--cHHHHHHHh--CCC
Confidence            5899999999999999999888889996  9999987766554333    23221 1  23332  222223332  224


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+++|.
T Consensus       217 g~Dvv~d~~g~  227 (346)
T 3fbg_A          217 LVDYVFCTFNT  227 (346)
T ss_dssp             CEEEEEESSCH
T ss_pred             CccEEEECCCc
Confidence            69999999874

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.38  E-value=0.0004  Score=49.37  Aligned_cols=77  Identities=13%  Similarity=0.134  Sum_probs=56.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++ .++|.|+ |.+|..+++.|.+.|.+  |++++++++..+.+.+      ..+..+.+|.++++.++++      
T Consensus         4 ~~~~~-~viIiG~-G~~G~~la~~L~~~g~~--v~vid~~~~~~~~~~~------~g~~~i~gd~~~~~~l~~a------   67 (140)
T 3fwz_A            4 VDICN-HALLVGY-GRVGSLLGEKLLASDIP--LVVIETSRTRVDELRE------RGVRAVLGNAANEEIMQLA------   67 (140)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCC--EEEEESCHHHHHHHHH------TTCEEEESCTTSHHHHHHT------
T ss_pred             ccCCC-CEEEECc-CHHHHHHHHHHHHCCCC--EEEEECCHHHHHHHHH------cCCCEEECCCCCHHHHHhc------
Confidence            34444 5777776 88999999999999998  9999998866443322      2466788999998866543      


Q ss_pred             HcCCccEEEECcc
Q 028056          104 KYGSLNLLINASG  116 (214)
Q Consensus       104 ~~~~vd~lv~nag  116 (214)
                      .....|.+|.+.+
T Consensus        68 ~i~~ad~vi~~~~   80 (140)
T 3fwz_A           68 HLECAKWLILTIP   80 (140)
T ss_dssp             TGGGCSEEEECCS
T ss_pred             CcccCCEEEEECC
Confidence            1236788888775

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.34  E-value=0.00016  Score=59.29  Aligned_cols=77  Identities=19%  Similarity=0.242  Sum_probs=50.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|+++||+||+|++|..++..+...|++  |+++ +++++++.+    .+.+...    .| .+.+ +.+.+.+... ..
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~--Vi~~-~~~~~~~~~----~~lGa~~----i~-~~~~-~~~~~~~~~~-~~  215 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGAR--VFAT-ARGSDLEYV----RDLGATP----ID-ASRE-PEDYAAEHTA-GQ  215 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEE-ECHHHHHHH----HHHTSEE----EE-TTSC-HHHHHHHHHT-TS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCE--EEEE-eCHHHHHHH----HHcCCCE----ec-cCCC-HHHHHHHHhc-CC
Confidence            4799999999999999999988889997  7777 665554332    2223322    34 3332 3333333222 13


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|+++|.
T Consensus       216 g~D~vid~~g~  226 (343)
T 3gaz_A          216 GFDLVYDTLGG  226 (343)
T ss_dssp             CEEEEEESSCT
T ss_pred             CceEEEECCCc
Confidence            69999999983

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.24  E-value=0.0012  Score=53.30  Aligned_cols=116  Identities=13%  Similarity=0.044  Sum_probs=66.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeec--CCCCccc-ccchhhc--CCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR--NPNGATG-LLDLKNR--FPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r--~~~~~~~-~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +++||||+|.+|..++..|+..|....++++++  ++++++. ..++...  ...++.+.. |  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            689999999999999999998876434888888  5543322 1111110  122233222 2  2222           


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      +...|++||.+|...        .+-  .+.   ...+..|+..+..+++.+.    +....     ..++++|...
T Consensus        68 ~~~aDvVi~~ag~~~--------~~g--~~r---~dl~~~N~~i~~~i~~~i~----~~~p~-----~~viv~SNPv  122 (303)
T 1o6z_A           68 TAGSDVVVITAGIPR--------QPG--QTR---IDLAGDNAPIMEDIQSSLD----EHNDD-----YISLTTSNPV  122 (303)
T ss_dssp             GTTCSEEEECCCCCC--------CTT--CCH---HHHHHHHHHHHHHHHHHHH----TTCSC-----CEEEECCSSH
T ss_pred             hCCCCEEEEcCCCCC--------CCC--CCH---HHHHHHHHHHHHHHHHHHH----HHCCC-----cEEEEeCChH
Confidence            247899999999653        111  111   1236667777666666554    33322     2666665544

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.23  E-value=0.00032  Score=56.11  Aligned_cols=46  Identities=22%  Similarity=0.343  Sum_probs=38.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccccc
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL   71 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~   71 (214)
                      .++++|+++|+|+ ||.|++++..|.+.|+. .|.+++|+.++.+.+.
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~-~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAK-DIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCS-EEEEEESCHHHHHHHC
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHH
Confidence            4578999999997 69999999999999995 5999999887655443

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.20  E-value=0.00061  Score=56.17  Aligned_cols=84  Identities=11%  Similarity=-0.013  Sum_probs=56.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+|||+|+ |++|...+......|++ .|+++++++++++.+.++    ...+.....|-.+.+++.+.+.++.. ..
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~~l----~~~~~~~~~~~~~~~~~~~~v~~~t~-g~  251 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGAC-PLVITDIDEGRLKFAKEI----CPEVVTHKVERLSAEESAKKIVESFG-GI  251 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHH----CTTCEEEECCSCCHHHHHHHHHHHTS-SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHh----chhcccccccccchHHHHHHHHHHhC-CC
Confidence            4789999998 99999999877778886 588888888765544433    22344444554555555433333321 13


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|.+.|.
T Consensus       252 g~Dvvid~~g~  262 (363)
T 3m6i_A          252 EPAVALECTGV  262 (363)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.16  E-value=6.5e-05  Score=53.73  Aligned_cols=71  Identities=17%  Similarity=0.137  Sum_probs=49.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +++++|.|+ |++|..+++.|.+.|.+  |.+++|++++.+.+.+..   +.  ...  +..+.   .+.++       .
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~--v~v~~r~~~~~~~~a~~~---~~--~~~--~~~~~---~~~~~-------~   80 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYK--VTVAGRNIDHVRAFAEKY---EY--EYV--LINDI---DSLIK-------N   80 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCE--EEEEESCHHHHHHHHHHH---TC--EEE--ECSCH---HHHHH-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEcCCHHHHHHHHHHh---CC--ceE--eecCH---HHHhc-------C
Confidence            889999996 99999999999999986  999999887655433332   21  111  23332   22222       5


Q ss_pred             ccEEEECcccc
Q 028056          108 LNLLINASGIL  118 (214)
Q Consensus       108 vd~lv~nag~~  118 (214)
                      .|++|++.+..
T Consensus        81 ~Divi~at~~~   91 (144)
T 3oj0_A           81 NDVIITATSSK   91 (144)
T ss_dssp             CSEEEECSCCS
T ss_pred             CCEEEEeCCCC
Confidence            79999998754

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.15  E-value=0.00074  Score=55.83  Aligned_cols=76  Identities=18%  Similarity=0.192  Sum_probs=52.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+|+ |++|..++..+...|++  |+++++++++.+.+.+   +.+...   ..|..+.+.+.       +..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~--Vi~~~~~~~~~~~~~~---~lGa~~---v~~~~~~~~~~-------~~~~  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSK--VTVISTSPSKKEEALK---NFGADS---FLVSRDQEQMQ-------AAAG  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCGGGHHHHHH---TSCCSE---EEETTCHHHHH-------HTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH---hcCCce---EEeccCHHHHH-------HhhC
Confidence            6899999996 99999999888888986  9999988766443321   223321   23666644332       2224


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|++|+++|..
T Consensus       251 ~~D~vid~~g~~  262 (366)
T 1yqd_A          251 TLDGIIDTVSAV  262 (366)
T ss_dssp             CEEEEEECCSSC
T ss_pred             CCCEEEECCCcH
Confidence            799999999853

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.12  E-value=0.00067  Score=56.23  Aligned_cols=77  Identities=19%  Similarity=0.298  Sum_probs=50.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+||+|++|..++..+...|++  |++++ ++++.+.    ..+.+... .  .|..+.+-.    +++.+ ..
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~--Vi~~~-~~~~~~~----~~~lGa~~-v--~~~~~~~~~----~~~~~-~~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAH--VTAVC-SQDASEL----VRKLGADD-V--IDYKSGSVE----EQLKS-LK  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEE-CGGGHHH----HHHTTCSE-E--EETTSSCHH----HHHHT-SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCE--EEEEe-ChHHHHH----HHHcCCCE-E--EECCchHHH----HHHhh-cC
Confidence            5789999999999999999888888986  77776 3433332    23334322 2  355443322    22322 25


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|++|+++|..
T Consensus       248 g~D~vid~~g~~  259 (375)
T 2vn8_A          248 PFDFILDNVGGS  259 (375)
T ss_dssp             CBSEEEESSCTT
T ss_pred             CCCEEEECCCCh
Confidence            799999999854

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.12  E-value=0.00036  Score=56.68  Aligned_cols=75  Identities=17%  Similarity=0.128  Sum_probs=48.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +++|+|++|++|..++..+...|++  |+.+++++++++.+.+    .+... .  .|..+.+  .+.++++.  .+.+|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~--vi~~~~~~~~~~~~~~----lGa~~-~--i~~~~~~--~~~~~~~~--~~~~d  218 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYT--VEASTGKAAEHDYLRV----LGAKE-V--LAREDVM--AERIRPLD--KQRWA  218 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCC--EEEEESCTTCHHHHHH----TTCSE-E--EECC-----------CC--SCCEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHH----cCCcE-E--EecCCcH--HHHHHHhc--CCccc
Confidence            7999999999999999888889997  9999998877554432    23322 2  3444332  12222221  23689


Q ss_pred             EEEECccc
Q 028056          110 LLINASGI  117 (214)
Q Consensus       110 ~lv~nag~  117 (214)
                      ++|+++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999984

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.11  E-value=0.00074  Score=55.25  Aligned_cols=77  Identities=18%  Similarity=0.200  Sum_probs=52.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCC-CcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~-~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .|.+++|+|+ |++|..++..+...|+ +  |+.+++++++.+.+.+. .    . .  ..|..+. ++.+.+.++.  .
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~--Vi~~~~~~~~~~~~~~l-a----~-~--v~~~~~~-~~~~~~~~~~--~  229 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGP--ILVSDPNPYRLAFARPY-A----D-R--LVNPLEE-DLLEVVRRVT--G  229 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCS--EEEECSCHHHHGGGTTT-C----S-E--EECTTTS-CHHHHHHHHH--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCE--EEEECCCHHHHHHHHHh-H----H-h--ccCcCcc-CHHHHHHHhc--C
Confidence            6889999999 9999999988888899 6  99999887665544332 1    1 1  1354442 2333333332  2


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      ..+|++|.++|.
T Consensus       230 ~g~D~vid~~g~  241 (343)
T 2dq4_A          230 SGVEVLLEFSGN  241 (343)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999984

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.08  E-value=0.001  Score=52.80  Aligned_cols=41  Identities=22%  Similarity=0.148  Sum_probs=36.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccccc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL   71 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~   71 (214)
                      +|+++|.|+ ||.|++++..|++.|.  .|.+.+|+.++.+.+.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~--~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGL--QVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHH
Confidence            899999997 8999999999999995  4999999998866544

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.05  E-value=0.00081  Score=55.41  Aligned_cols=86  Identities=14%  Similarity=0.107  Sum_probs=49.7

Q ss_pred             cC-cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCH--HHHHHHHHHHHH
Q 028056           27 KG-GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE--STIEASAKSIKE  103 (214)
Q Consensus        27 ~~-k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~~  103 (214)
                      .| .+|+|+|++|++|..++......|++  ++.++++.++.++..+.+.+.+... .+  |..+.  +++.+.+.++..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~--vi~~~~~~~~~~~~~~~~~~lGa~~-vi--~~~~~~~~~~~~~i~~~t~  240 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFN--SISVIRDRPNLDEVVASLKELGATQ-VI--TEDQNNSREFGPTIKEWIK  240 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCE--EEEEECCCTTHHHHHHHHHHHTCSE-EE--EHHHHHCGGGHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCE--EEEEecCccccHHHHHHHHhcCCeE-EE--ecCccchHHHHHHHHHHhh
Confidence            46 89999999999999998777778986  7777776655221112222333322 22  22110  122222222220


Q ss_pred             -HcCCccEEEECccc
Q 028056          104 -KYGSLNLLINASGI  117 (214)
Q Consensus       104 -~~~~vd~lv~nag~  117 (214)
                       ..+.+|++|.+.|.
T Consensus       241 ~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          241 QSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHTCCEEEEEESSCH
T ss_pred             ccCCCceEEEECCCc
Confidence             12469999999874

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.05  E-value=0.00048  Score=52.63  Aligned_cols=73  Identities=7%  Similarity=0.138  Sum_probs=50.6

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      .++|.|+ |.+|..+++.|.+.|.+  |++++++++..+.+.+.     ..+.++.+|.++++.++++      .....|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~--v~vid~~~~~~~~l~~~-----~~~~~i~gd~~~~~~l~~a------~i~~ad   67 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYG--VVIINKDRELCEEFAKK-----LKATIIHGDGSHKEILRDA------EVSKND   67 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCC--EEEEESCHHHHHHHHHH-----SSSEEEESCTTSHHHHHHH------TCCTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHHHHHHH-----cCCeEEEcCCCCHHHHHhc------CcccCC
Confidence            4889996 89999999999999998  99999887654432221     1355677788877655432      123556


Q ss_pred             EEEECcc
Q 028056          110 LLINASG  116 (214)
Q Consensus       110 ~lv~nag  116 (214)
                      ++|.+.+
T Consensus        68 ~vi~~~~   74 (218)
T 3l4b_C           68 VVVILTP   74 (218)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            6666554

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.02  E-value=0.00078  Score=56.58  Aligned_cols=75  Identities=17%  Similarity=0.230  Sum_probs=51.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++.|++++|.|+ |++|..+++.+...|+. .|++++|+.++.+.+.+..   +..  .  .+.   +++.+.+      
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~-~V~v~~r~~~ra~~la~~~---g~~--~--~~~---~~l~~~l------  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVR-AVLVANRTYERAVELARDL---GGE--A--VRF---DELVDHL------  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHHH---TCE--E--CCG---GGHHHHH------
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHc---CCc--e--ecH---HhHHHHh------
Confidence            478999999998 99999999999999984 4999999876543332222   221  1  122   2232222      


Q ss_pred             cCCccEEEECcccc
Q 028056          105 YGSLNLLINASGIL  118 (214)
Q Consensus       105 ~~~vd~lv~nag~~  118 (214)
                       ...|++|++.+..
T Consensus       226 -~~aDvVi~at~~~  238 (404)
T 1gpj_A          226 -ARSDVVVSATAAP  238 (404)
T ss_dssp             -HTCSEEEECCSSS
T ss_pred             -cCCCEEEEccCCC
Confidence             2689999998643

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.02  E-value=0.0014  Score=51.41  Aligned_cols=39  Identities=18%  Similarity=0.146  Sum_probs=33.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..+++++|+|.|+ ||+|.++++.|+..|.. .+.+++.+.
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg-~i~lvD~d~   62 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVG-TLVLADDDD   62 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCS-EEEEECCCB
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCC-eEEEEeCCC
Confidence            4578899999998 57999999999999997 788887653

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.96  E-value=0.00059  Score=55.95  Aligned_cols=79  Identities=16%  Similarity=0.148  Sum_probs=51.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCC-CcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKND-KGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~-~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .|++++|+|+ |++|..++..+...|+ +  |+++++++++.+.+.+    .+... .  .|..+.+ +.+.+.++.. .
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~--Vi~~~~~~~~~~~~~~----~Ga~~-~--~~~~~~~-~~~~v~~~~~-g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYP--VIVSEPSDFRRELAKK----VGADY-V--INPFEED-VVKEVMDITD-G  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCS--EEEECSCHHHHHHHHH----HTCSE-E--ECTTTSC-HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCE--EEEECCCHHHHHHHHH----hCCCE-E--ECCCCcC-HHHHHHHHcC-C
Confidence            7899999999 9999999988888999 6  9999988765443322    22211 1  3544432 2222222211 1


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      ..+|++|+++|.
T Consensus       235 ~g~D~vid~~g~  246 (348)
T 2d8a_A          235 NGVDVFLEFSGA  246 (348)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            258999999984

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.88  E-value=0.00084  Score=55.41  Aligned_cols=78  Identities=14%  Similarity=0.185  Sum_probs=51.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++|+|+| +|++|..++..+...|++  |+++++++++++.+.+    .+... .  .| .+.+++.+.+.++... .
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~~----lGa~~-v--i~-~~~~~~~~~v~~~~~g-~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAE--VIVTSSSREKLDRAFA----LGADH-G--IN-RLEEDWVERVYALTGD-R  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH----HTCSE-E--EE-TTTSCHHHHHHHHHTT-C
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCE--EEEEecCchhHHHHHH----cCCCE-E--Ec-CCcccHHHHHHHHhCC-C
Confidence            478999999 899999999888888996  9999988766554322    23322 2  24 3333333333333221 2


Q ss_pred             CccEEEECcc
Q 028056          107 SLNLLINASG  116 (214)
Q Consensus       107 ~vd~lv~nag  116 (214)
                      .+|++|.++|
T Consensus       257 g~D~vid~~g  266 (363)
T 3uog_A          257 GADHILEIAG  266 (363)
T ss_dssp             CEEEEEEETT
T ss_pred             CceEEEECCC
Confidence            6999999998

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.85  E-value=0.0018  Score=53.62  Aligned_cols=80  Identities=19%  Similarity=0.246  Sum_probs=52.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCC-HHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~  105 (214)
                      .|++|||+|+ |++|..++..+...|+. .|+++++++++++.+.    +.+.. ..  .|..+ .+++.+.+.++..  
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~-~Vi~~~~~~~~~~~~~----~lGa~-~v--i~~~~~~~~~~~~~~~~~~--  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAK-RIIAVDLNPDKFEKAK----VFGAT-DF--VNPNDHSEPISQVLSKMTN--  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHH----HTTCC-EE--ECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHHHH----HhCCc-eE--EeccccchhHHHHHHHHhC--
Confidence            4789999995 89999999877778984 4888888887655432    22332 11  34432 1233333443332  


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      +.+|++|+++|.
T Consensus       261 ~g~D~vid~~g~  272 (374)
T 1cdo_A          261 GGVDFSLECVGN  272 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999984

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.82  E-value=0.00098  Score=52.42  Aligned_cols=44  Identities=25%  Similarity=0.168  Sum_probs=36.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccccc
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL   71 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~   71 (214)
                      .+++ +++|.|+ ||.|++++..|++.|+. .|.+.+|+.++.+.+.
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~-~I~v~nR~~~ka~~la  149 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVK-DIWVVNRTIERAKALD  149 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCC-CEEEEESCHHHHHTCC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHH
Confidence            4577 8999987 89999999999999984 4999999887655443

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.80  E-value=0.0014  Score=53.73  Aligned_cols=81  Identities=22%  Similarity=0.149  Sum_probs=50.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCC-HHHHHHHHHHHHH-H
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKE-K  104 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~-~  104 (214)
                      .|++|+|+|+ |++|..++..+...|++  |+++++++++++.+.    +.+.. ..  .|..+ .+..+++.+...+ .
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~----~lGa~-~~--~~~~~~~~~~~~i~~~~~~~~  237 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAF--VVCTARSPRRLEVAK----NCGAD-VT--LVVDPAKEEESSIIERIRSAI  237 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHH----HTTCS-EE--EECCTTTSCHHHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCE--EEEEcCCHHHHHHHH----HhCCC-EE--EcCcccccHHHHHHHHhcccc
Confidence            4789999997 89999999877778987  888888876544332    23333 12  34443 2222222222210 0


Q ss_pred             cCCccEEEECccc
Q 028056          105 YGSLNLLINASGI  117 (214)
Q Consensus       105 ~~~vd~lv~nag~  117 (214)
                      ...+|++|+++|.
T Consensus       238 g~g~D~vid~~g~  250 (352)
T 1e3j_A          238 GDLPNVTIDCSGN  250 (352)
T ss_dssp             SSCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2369999999984

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.79  E-value=0.0041  Score=50.47  Aligned_cols=83  Identities=14%  Similarity=0.033  Sum_probs=56.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCcee-EEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD-VLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+++||+++|.|++.-+|+.+|+.|+..|++  |.+++|+........+.+.   ...+ ...+..++++++.+.+.   
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAt--Vtv~nR~~~~l~~ra~~la---~~~~~~t~~~~t~~~~L~e~l~---  244 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGAT--VYSVDVNNIQKFTRGESLK---LNKHHVEDLGEYSEDLLKKCSL---  244 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCE--EEEECSSEEEEEESCCCSS---CCCCEEEEEEECCHHHHHHHHH---
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCE--EEEEeCchHHHHhHHHHHh---hhcccccccccccHhHHHHHhc---
Confidence            3789999999999998999999999999986  8888887544322222221   1111 11112244456655555   


Q ss_pred             HHcCCccEEEECcccc
Q 028056          103 EKYGSLNLLINASGIL  118 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~  118 (214)
                          .-|+||...|..
T Consensus       245 ----~ADIVIsAtg~p  256 (320)
T 1edz_A          245 ----DSDVVITGVPSE  256 (320)
T ss_dssp             ----HCSEEEECCCCT
T ss_pred             ----cCCEEEECCCCC
Confidence                459999999864

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.73  E-value=0.0031  Score=51.62  Aligned_cols=39  Identities=15%  Similarity=0.101  Sum_probs=33.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      -.+++++|+|.|+ ||+|.++++.|+..|.. ++.+++++.
T Consensus        30 ~kL~~~~VlIvGa-GGlGs~va~~La~aGVg-~ItlvD~D~   68 (340)
T 3rui_A           30 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVR-KITFVDNGT   68 (340)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECCCB
T ss_pred             HHHhCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEecCCE
Confidence            3678999999987 58999999999999997 788888755

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.73  E-value=0.0025  Score=52.91  Aligned_cols=79  Identities=19%  Similarity=0.185  Sum_probs=51.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCC--CHHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT--VESTIEASAKSIKEK  104 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~~  104 (214)
                      .|.+|||+| +|++|..++..+...|+. .|+++++++++++.+.    +.+.. ..+  |..  +.+++.   +++.+.
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~~~----~lGa~-~vi--~~~~~~~~~~~---~~v~~~  262 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAE-NVIVIAGSPNRLKLAE----EIGAD-LTL--NRRETSVEERR---KAIMDI  262 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBS-EEEEEESCHHHHHHHH----HTTCS-EEE--ETTTSCHHHHH---HHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCc-eEEEEcCCHHHHHHHH----HcCCc-EEE--eccccCcchHH---HHHHHH
Confidence            478999999 899999999877778842 3999998876654332    23332 122  433  233333   333332


Q ss_pred             c-C-CccEEEECccc
Q 028056          105 Y-G-SLNLLINASGI  117 (214)
Q Consensus       105 ~-~-~vd~lv~nag~  117 (214)
                      . + .+|++|.++|.
T Consensus       263 ~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          263 THGRGADFILEATGD  277 (380)
T ss_dssp             TTTSCEEEEEECSSC
T ss_pred             hCCCCCcEEEECCCC
Confidence            2 2 59999999984

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.71  E-value=0.0035  Score=50.82  Aligned_cols=35  Identities=23%  Similarity=0.080  Sum_probs=30.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ++.|+||+|.+|..++..|+..|.-..|+++++++
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~   36 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH   36 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence            58999999999999999999888422599999987

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.67  E-value=0.0017  Score=53.50  Aligned_cols=75  Identities=11%  Similarity=0.076  Sum_probs=51.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+|||+|+ |++|..++..+...|++  |+++++++++++.+.+    .+... .  .|..+..+   +.+++.   +
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~--Vi~~~~~~~~~~~~~~----lGa~~-v--~~~~~~~~---~~~~~~---~  242 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAE--TYVISRSSRKREDAMK----MGADH-Y--IATLEEGD---WGEKYF---D  242 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCE--EEEEESSSTTHHHHHH----HTCSE-E--EEGGGTSC---HHHHSC---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHH----cCCCE-E--EcCcCchH---HHHHhh---c
Confidence            4789999999 99999999877778996  9999998887654433    23221 2  24333201   122222   4


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|.++|.
T Consensus       243 ~~D~vid~~g~  253 (360)
T 1piw_A          243 TFDLIVVCASS  253 (360)
T ss_dssp             CEEEEEECCSC
T ss_pred             CCCEEEECCCC
Confidence            79999999986

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.66  E-value=0.0026  Score=51.89  Aligned_cols=77  Identities=12%  Similarity=0.055  Sum_probs=51.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.++||+|+ |++|..++..+...|++  |+.+++++++.+.+.    +.+....   .|..+.+..+.+.+    ..+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~----~lGa~~~---i~~~~~~~~~~~~~----~~g  231 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLR--VAAVDIDDAKLNLAR----RLGAEVA---VNARDTDPAAWLQK----EIG  231 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCE--EEEEESCHHHHHHHH----HTTCSEE---EETTTSCHHHHHHH----HHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHH----HcCCCEE---EeCCCcCHHHHHHH----hCC
Confidence            5789999997 89999999877778996  999998876655332    2333221   34444333222222    235


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|.++|.
T Consensus       232 ~~d~vid~~g~  242 (340)
T 3s2e_A          232 GAHGVLVTAVS  242 (340)
T ss_dssp             SEEEEEESSCC
T ss_pred             CCCEEEEeCCC
Confidence            78999998873

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.65  E-value=0.0017  Score=53.90  Aligned_cols=80  Identities=13%  Similarity=0.171  Sum_probs=52.5

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCC-HHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~  105 (214)
                      .|.+|+|+|+ |++|...+......|+. .|+++++++++++.+.    +.+... .  .|..+ .+++.+.+.++..  
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~-~Vi~~~~~~~~~~~a~----~lGa~~-v--i~~~~~~~~~~~~i~~~~~--  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGAS-RIIGIDIDSKKYETAK----KFGVNE-F--VNPKDHDKPIQEVIVDLTD--  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCS-CEEEECSCTTHHHHHH----TTTCCE-E--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHH----HcCCcE-E--EccccCchhHHHHHHHhcC--
Confidence            4789999998 99999999888888984 4999998887755332    223322 2  23332 2233333333322  


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      +.+|++|.++|.
T Consensus       262 gg~D~vid~~g~  273 (378)
T 3uko_A          262 GGVDYSFECIGN  273 (378)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999885

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.63  E-value=0.0019  Score=53.67  Aligned_cols=80  Identities=16%  Similarity=0.193  Sum_probs=52.5

Q ss_pred             cCcEEEEec-CCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQG-ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG-~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .|.+++|.| |+|++|...+......|++  |+.+++++++.+.+.    +.+... .  .|..+.+-.+++.+....  
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~--Vi~~~~~~~~~~~~~----~lGa~~-~--~~~~~~~~~~~v~~~t~~--  238 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIK--LVNIVRKQEQADLLK----AQGAVH-V--CNAASPTFMQDLTEALVS--  238 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCC--EEEEESSHHHHHHHH----HTTCSC-E--EETTSTTHHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHH----hCCCcE-E--EeCCChHHHHHHHHHhcC--
Confidence            578899997 9999999999887888997  888888876654433    233322 2  244443322222222222  


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      ..+|++|.+.|.
T Consensus       239 ~g~d~v~d~~g~  250 (379)
T 3iup_A          239 TGATIAFDATGG  250 (379)
T ss_dssp             HCCCEEEESCEE
T ss_pred             CCceEEEECCCc
Confidence            269999999985

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.63  E-value=0.0031  Score=52.17  Aligned_cols=80  Identities=14%  Similarity=0.143  Sum_probs=51.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCC-HHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~  105 (214)
                      .|.+|+|+|+ |++|..++..+...|+. .|+++++++++++.+.    +.+... .  .|..+ .+++.+.+.++..  
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~----~lGa~~-v--i~~~~~~~~~~~~v~~~~~--  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGAS-RIIAIDINGEKFPKAK----ALGATD-C--LNPRELDKPVQDVITELTA--  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHH----HTTCSE-E--ECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHH----HhCCcE-E--EccccccchHHHHHHHHhC--
Confidence            4789999995 89999999877778984 4888888887655432    223321 1  24332 1223333333322  


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      +.+|++|.++|.
T Consensus       264 ~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 GGVDYSLDCAGT  275 (376)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCccEEEECCCC
Confidence            479999999984

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.62  E-value=0.0027  Score=52.48  Aligned_cols=80  Identities=16%  Similarity=0.206  Sum_probs=51.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCC-HHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~  105 (214)
                      .|.+|||+|+ |++|..++..+...|+. .|+++++++++.+.+.+    .+... .  .|..+ .+++.+.+.++..  
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~-~Vi~~~~~~~~~~~~~~----lGa~~-v--i~~~~~~~~~~~~v~~~~~--  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGAS-RIIGVDINKDKFARAKE----FGATE-C--INPQDFSKPIQEVLIEMTD--  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSCGGGHHHHHH----HTCSE-E--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH----cCCce-E--eccccccccHHHHHHHHhC--
Confidence            4789999996 89999999877778984 48888888876554332    23221 1  24332 1223333333322  


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      +.+|++|.++|.
T Consensus       259 ~g~D~vid~~g~  270 (373)
T 2fzw_A          259 GGVDYSFECIGN  270 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999974

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.62  E-value=0.003  Score=53.01  Aligned_cols=43  Identities=21%  Similarity=0.050  Sum_probs=36.7

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~   70 (214)
                      .+.+++|+|+|+ |.+|..+++.+...|++  |+++++++..++.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~--V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAI--VRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHH
Confidence            467899999996 89999999999999986  99999988765543

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.62  E-value=0.0049  Score=50.61  Aligned_cols=80  Identities=18%  Similarity=0.111  Sum_probs=50.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCC--CHHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT--VESTIEASAKSIKEK  104 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~~  104 (214)
                      .|.+|+|+|+ |++|..++......|+. .|+++++++++++.+.    +.+.. ..  .|..  +.++..+.+.+... 
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~----~lGa~-~v--i~~~~~~~~~~~~~i~~~~~-  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAA-QVVVTDLSATRLSKAK----EIGAD-LV--LQISKESPQEIARKVEGQLG-  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHH----HTTCS-EE--EECSSCCHHHHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHH----HhCCC-EE--EcCcccccchHHHHHHHHhC-
Confidence            4789999996 89999998777778984 4888888776544332    23332 22  2444  22333222222221 


Q ss_pred             cCCccEEEECccc
Q 028056          105 YGSLNLLINASGI  117 (214)
Q Consensus       105 ~~~vd~lv~nag~  117 (214)
                       ..+|++|.++|.
T Consensus       241 -~g~D~vid~~g~  252 (356)
T 1pl8_A          241 -CKPEVTIECTGA  252 (356)
T ss_dssp             -SCCSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             469999999984

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.61  E-value=0.0031  Score=51.84  Aligned_cols=74  Identities=16%  Similarity=0.240  Sum_probs=48.7

Q ss_pred             cEEEEecCCCchhHHH-HHHH-HhcCCCcEEEEeecCCC---CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEF-AKQL-LEKNDKGCVIATCRNPN---GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        29 k~vlItG~s~giG~~~-a~~l-~~~g~~~~vi~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .+|+|+|+ |++|..+ +... ...|++ .|++++++++   +.+.+.    +.+.  ..+  |..+.+ +.+ +.++  
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~-~Vi~~~~~~~~~~~~~~~~----~lGa--~~v--~~~~~~-~~~-i~~~--  239 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYE-NLYCLGRRDRPDPTIDIIE----ELDA--TYV--DSRQTP-VED-VPDV--  239 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCC-EEEEEECCCSSCHHHHHHH----HTTC--EEE--ETTTSC-GGG-HHHH--
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCc-EEEEEeCCcccHHHHHHHH----HcCC--ccc--CCCccC-HHH-HHHh--
Confidence            89999999 9999998 7555 467885 5899998886   544332    2232  222  544432 333 3333  


Q ss_pred             HcCCccEEEECccc
Q 028056          104 KYGSLNLLINASGI  117 (214)
Q Consensus       104 ~~~~vd~lv~nag~  117 (214)
                       .+.+|++|.+.|.
T Consensus       240 -~gg~Dvvid~~g~  252 (357)
T 2b5w_A          240 -YEQMDFIYEATGF  252 (357)
T ss_dssp             -SCCEEEEEECSCC
T ss_pred             -CCCCCEEEECCCC
Confidence             2379999999984

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.58  E-value=0.0025  Score=52.72  Aligned_cols=80  Identities=14%  Similarity=0.201  Sum_probs=51.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCC-HHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~  105 (214)
                      .|++|+|+|+ |++|..++..+...|+. .|+++++++++++.+.    +.+.. ..  .|..+ .+++.+.+.++..  
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~-~Vi~~~~~~~~~~~~~----~lGa~-~v--i~~~~~~~~~~~~~~~~~~--  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAA-RIIGVDINKDKFAKAK----EVGAT-EC--VNPQDYKKPIQEVLTEMSN--  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHH----HTTCS-EE--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHH----HhCCc-eE--ecccccchhHHHHHHHHhC--
Confidence            4789999995 89999999877778984 4888988887655432    22332 12  24432 1223333333322  


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      +.+|++|.++|.
T Consensus       260 ~g~D~vid~~g~  271 (374)
T 2jhf_A          260 GGVDFSFEVIGR  271 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            379999999974

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.55  E-value=0.0022  Score=52.44  Aligned_cols=70  Identities=20%  Similarity=0.165  Sum_probs=48.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+|+|+|+ |++|..++......|++  |+++++++++.+.+.+    .+....+     ++.+.+.+          
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~--Vi~~~~~~~~~~~~~~----lGa~~v~-----~~~~~~~~----------  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAE--VSVFARNEHKKQDALS----MGVKHFY-----TDPKQCKE----------  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCE--EEEECSSSTTHHHHHH----TTCSEEE-----SSGGGCCS----------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHh----cCCCeec-----CCHHHHhc----------
Confidence            4899999997 89999999877778986  9999998887664432    3333222     33332211          


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|++|.+.|..
T Consensus       234 ~~D~vid~~g~~  245 (348)
T 3two_A          234 ELDFIISTIPTH  245 (348)
T ss_dssp             CEEEEEECCCSC
T ss_pred             CCCEEEECCCcH
Confidence            688888888754

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.55  E-value=0.0027  Score=52.29  Aligned_cols=79  Identities=16%  Similarity=0.115  Sum_probs=51.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .|.+|+|+|+ |++|..++...... |++  |+++++++++++.+.    +.+... .  .|..+.  +.+.+.++.. .
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~--Vi~~~~~~~~~~~~~----~lGa~~-v--i~~~~~--~~~~v~~~~~-g  252 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPAT--VIALDVKEEKLKLAE----RLGADH-V--VDARRD--PVKQVMELTR-G  252 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCE--EEEEESSHHHHHHHH----HTTCSE-E--EETTSC--HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCe--EEEEeCCHHHHHHHH----HhCCCE-E--Eeccch--HHHHHHHHhC-C
Confidence            4789999999 89999998766667 886  999998876554332    233322 2  355443  3333333321 1


Q ss_pred             CCccEEEECcccc
Q 028056          106 GSLNLLINASGIL  118 (214)
Q Consensus       106 ~~vd~lv~nag~~  118 (214)
                      ..+|++|.++|..
T Consensus       253 ~g~Dvvid~~G~~  265 (359)
T 1h2b_A          253 RGVNVAMDFVGSQ  265 (359)
T ss_dssp             CCEEEEEESSCCH
T ss_pred             CCCcEEEECCCCc
Confidence            2699999999853

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.54  E-value=0.0035  Score=51.87  Aligned_cols=75  Identities=13%  Similarity=0.082  Sum_probs=51.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+|||+|+ |++|..++......|++  |+++++++++.+.+.+    .+...   ..|..+.+.+    +++.   +
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~--Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~~~~----~~~~---~  256 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAH--VVAFTTSEAKREAAKA----LGADE---VVNSRNADEM----AAHL---K  256 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHH----HTCSE---EEETTCHHHH----HTTT---T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH----cCCcE---EeccccHHHH----HHhh---c
Confidence            4789999997 89999999877778886  9999988876554432    23221   1355554322    2221   4


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|++|.++|..
T Consensus       257 g~Dvvid~~g~~  268 (369)
T 1uuf_A          257 SFDFILNTVAAP  268 (369)
T ss_dssp             CEEEEEECCSSC
T ss_pred             CCCEEEECCCCH
Confidence            799999999853

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.53  E-value=0.0018  Score=53.53  Aligned_cols=76  Identities=17%  Similarity=0.268  Sum_probs=47.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHh--cCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLE--KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~--~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .|.+|+|+||+|++|...+. +++  .|++  |+++++++++.+.+.    +.+... .  .|-.+  ++   .+++.+.
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~q-lak~~~g~~--Vi~~~~~~~~~~~~~----~lGad~-v--i~~~~--~~---~~~v~~~  235 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQ-IARQRTDLT--VIATASRPETQEWVK----SLGAHH-V--IDHSK--PL---AAEVAAL  235 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHH-HHHHHCCSE--EEEECSSHHHHHHHH----HTTCSE-E--ECTTS--CH---HHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHH-HHHHhcCCE--EEEEeCCHHHHHHHH----HcCCCE-E--EeCCC--CH---HHHHHHh
Confidence            57899999999999988775 555  3665  999998876544332    233321 1  23332  12   2333332


Q ss_pred             -cCCccEEEECccc
Q 028056          105 -YGSLNLLINASGI  117 (214)
Q Consensus       105 -~~~vd~lv~nag~  117 (214)
                       .+.+|+++.++|.
T Consensus       236 ~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          236 GLGAPAFVFSTTHT  249 (363)
T ss_dssp             CSCCEEEEEECSCH
T ss_pred             cCCCceEEEECCCc
Confidence             2468999888874

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.49  E-value=0.011  Score=47.01  Aligned_cols=86  Identities=13%  Similarity=-0.048  Sum_probs=56.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh--------------------------------hc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK--------------------------------NR   76 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~--------------------------------~~   76 (214)
                      +++.|.|+ |.+|..+|..|++.|.+  |++.+++++.++...+.+                                .+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~--V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~   81 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFA--VTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ   81 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCe--EEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence            57778875 78999999999999997  999999987655432210                                00


Q ss_pred             -CCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECccc
Q 028056           77 -FPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI  117 (214)
Q Consensus        77 -~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~lv~nag~  117 (214)
                       ...--..+.+--.+.+....+++++.+..++=.++++|...
T Consensus        82 ~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~  123 (283)
T 4e12_A           82 AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST  123 (283)
T ss_dssp             HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred             HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence             11111233344455567777788887766555567766654

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.45  E-value=0.005  Score=50.92  Aligned_cols=78  Identities=21%  Similarity=0.210  Sum_probs=50.0

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH-
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK-  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  104 (214)
                      -.|.+|+|+|++|++|...+......|++  |+.+. ++++++    ...+.+.. ..  .|..+.+ +.   +++.+. 
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~--Vi~~~-~~~~~~----~~~~lGa~-~v--i~~~~~~-~~---~~v~~~t  228 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYI--PIATC-SPHNFD----LAKSRGAE-EV--FDYRAPN-LA---QTIRTYT  228 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEE-CGGGHH----HHHHTTCS-EE--EETTSTT-HH---HHHHHHT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCE--EEEEe-CHHHHH----HHHHcCCc-EE--EECCCch-HH---HHHHHHc
Confidence            46789999999999999999888888986  66665 444433    22333432 12  2444433 22   223322 


Q ss_pred             cCCccEEEECccc
Q 028056          105 YGSLNLLINASGI  117 (214)
Q Consensus       105 ~~~vd~lv~nag~  117 (214)
                      .+++|++|.+.|.
T Consensus       229 ~g~~d~v~d~~g~  241 (371)
T 3gqv_A          229 KNNLRYALDCITN  241 (371)
T ss_dssp             TTCCCEEEESSCS
T ss_pred             cCCccEEEECCCc
Confidence            2459999999984

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.44  E-value=0.0019  Score=53.13  Aligned_cols=37  Identities=14%  Similarity=0.231  Sum_probs=29.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      .|.+|||+|++|++|..++......|++  ++.+.+..+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~--vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLR--TINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCE--EEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCE--EEEEecCcc
Confidence            4789999999999999988766678987  666655443

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.41  E-value=0.0039  Score=51.53  Aligned_cols=80  Identities=13%  Similarity=0.168  Sum_probs=50.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCC-HHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~  105 (214)
                      .|.+|+|+|+ |++|..++......|+. .|+++++++++++.+.    +.+... .  .|..+ .+++.+.+.++..  
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~----~lGa~~-v--i~~~~~~~~~~~~i~~~t~--  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGAS-RIIGVGTHKDKFPKAI----ELGATE-C--LNPKDYDKPIYEVICEKTN--  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSCGGGHHHHH----HTTCSE-E--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCHHHHHHHH----HcCCcE-E--EecccccchHHHHHHHHhC--
Confidence            4789999995 89999998777778984 4888888877655432    233321 2  23332 1223333333322  


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      +.+|++|.++|.
T Consensus       260 gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 GGVDYAVECAGR  271 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999974

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.39  E-value=0.005  Score=50.58  Aligned_cols=76  Identities=14%  Similarity=0.083  Sum_probs=51.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+|+|+|+ |++|..++..+...|++  |+++++++++.+.+.+   +.+... .  .|..+.+.+.       +..+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~--Vi~~~~~~~~~~~~~~---~lGa~~-v--i~~~~~~~~~-------~~~~  243 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHH--VTVISSSNKKREEALQ---DLGADD-Y--VIGSDQAKMS-------ELAD  243 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCE--EEEEESSTTHHHHHHT---TSCCSC-E--EETTCHHHHH-------HSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCe--EEEEeCChHHHHHHHH---HcCCce-e--eccccHHHHH-------HhcC
Confidence            6889999995 99999999877778986  9999988776544331   223321 2  2444433222       2224


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|++|.++|..
T Consensus       244 g~D~vid~~g~~  255 (357)
T 2cf5_A          244 SLDYVIDTVPVH  255 (357)
T ss_dssp             TEEEEEECCCSC
T ss_pred             CCCEEEECCCCh
Confidence            799999999853

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.36  E-value=0.0042  Score=51.95  Aligned_cols=78  Identities=19%  Similarity=0.192  Sum_probs=50.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  105 (214)
                      .|.+|||+|+ |++|..++......|+. .|+++++++++++.+.    +.+... .  .|..+.+-    .+++.+.. 
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~~~----~lGa~~-v--i~~~~~~~----~~~i~~~t~  279 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGAS-KVILSEPSEVRRNLAK----ELGADH-V--IDPTKENF----VEAVLDYTN  279 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCHHHHHHHH----HHTCSE-E--ECTTTSCH----HHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHH----HcCCCE-E--EcCCCCCH----HHHHHHHhC
Confidence            4789999998 89999998877778994 4888888876654332    223221 2  24443322    22333322 


Q ss_pred             -CCccEEEECccc
Q 028056          106 -GSLNLLINASGI  117 (214)
Q Consensus       106 -~~vd~lv~nag~  117 (214)
                       ..+|++|.++|.
T Consensus       280 g~g~D~vid~~g~  292 (404)
T 3ip1_A          280 GLGAKLFLEATGV  292 (404)
T ss_dssp             TCCCSEEEECSSC
T ss_pred             CCCCCEEEECCCC
Confidence             259999999984

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.35  E-value=0.0069  Score=53.16  Aligned_cols=38  Identities=16%  Similarity=0.141  Sum_probs=33.5

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      .+++++|+|.|++ |+|..+++.|+..|.. ++.++|.+.
T Consensus       323 kL~~arVLIVGaG-GLGs~vA~~La~aGVG-~ItLvD~D~  360 (615)
T 4gsl_A          323 IIKNTKVLLLGAG-TLGCYVSRALIAWGVR-KITFVDNGT  360 (615)
T ss_dssp             HHHTCEEEEECCS-HHHHHHHHHHHHTTCC-EEEEECCCB
T ss_pred             HHhCCeEEEECCC-HHHHHHHHHHHHcCCC-EEEEEcCCC
Confidence            5688999999885 8999999999999997 898888765

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.33  E-value=0.0023  Score=52.80  Aligned_cols=40  Identities=20%  Similarity=0.165  Sum_probs=34.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      -.+++++|+|.|+ ||+|.++++.|+..|.. ++.+++++.-
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg-~i~lvD~D~V  153 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIG-EIILIDNDQI  153 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEEECCBC
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCC-eEEEECCCcC
Confidence            4577899999987 78999999999999997 7888887653

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.32  E-value=0.02  Score=45.71  Aligned_cols=85  Identities=12%  Similarity=0.057  Sum_probs=59.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccch-------hhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL-------KNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +++.|.| .|.+|..+++.|++.|.+  |++++|++++.+.+.+.       ..+.-. ..++-.-+.+...++++++++
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~--V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l   91 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGG--VTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGEL   91 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTC--EEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHH
Confidence            4577776 678999999999999998  99999999876643221       111111 344555566777888888888


Q ss_pred             HHHcCCccEEEECccc
Q 028056          102 KEKYGSLNLLINASGI  117 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~  117 (214)
                      .....+-.++|++...
T Consensus        92 ~~~l~~g~ivv~~st~  107 (296)
T 3qha_A           92 AGHAKPGTVIAIHSTI  107 (296)
T ss_dssp             HTTCCTTCEEEECSCC
T ss_pred             HHhcCCCCEEEEeCCC
Confidence            7665555677777654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.32  E-value=0.031  Score=45.43  Aligned_cols=77  Identities=16%  Similarity=0.173  Sum_probs=49.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhc---CCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNR---FPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +.+++.|+|+ |.+|.+++..|+..|.-..|++.++++++++. ..++...   .+.++.....|   .+          
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~----------   69 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE----------   69 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH----------
Confidence            3467999996 99999999999999872259999998765543 1112111   11233333222   11          


Q ss_pred             HHcCCccEEEECcccc
Q 028056          103 EKYGSLNLLINASGIL  118 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~  118 (214)
                       .+..-|++|..+|..
T Consensus        70 -a~~~aDvVvi~ag~p   84 (326)
T 3pqe_A           70 -DCKDADIVCICAGAN   84 (326)
T ss_dssp             -GGTTCSEEEECCSCC
T ss_pred             -HhCCCCEEEEecccC
Confidence             224689999999964

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.31  E-value=0.0013  Score=53.73  Aligned_cols=36  Identities=19%  Similarity=0.124  Sum_probs=29.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcE-----EEEeecCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGC-----VIATCRNP   64 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~-----vi~~~r~~   64 (214)
                      .+|+||||+|.+|.+++..|+..|.-..     |+++++++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~   44 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP   44 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCC
Confidence            4799999999999999999998775323     78888764

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.29  E-value=0.0057  Score=50.93  Aligned_cols=43  Identities=19%  Similarity=0.053  Sum_probs=37.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~   70 (214)
                      .+.+++++|+|+ |.+|..+++.+...|++  |+++++++.+++.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~--V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAV--VMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH
Confidence            568999999996 89999999999999996  99999988765543

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.24  E-value=0.0017  Score=53.26  Aligned_cols=43  Identities=14%  Similarity=-0.030  Sum_probs=35.4

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      ++++.|.|+|++|.+|..+|..++..|....|+++|.++++++
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~   48 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLE   48 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHH
Confidence            4567899999999999999999999985224999998876544

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.23  E-value=0.003  Score=48.61  Aligned_cols=57  Identities=16%  Similarity=0.060  Sum_probs=38.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIE   95 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~   95 (214)
                      .+.++|.|+ |.+|..+++.|.+.|.   |++++++++..+.+.       ..+.++.+|.++++.++
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~---v~vid~~~~~~~~~~-------~~~~~i~gd~~~~~~l~   65 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV---FVLAEDENVRKKVLR-------SGANFVHGDPTRVSDLE   65 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE---EEEESCGGGHHHHHH-------TTCEEEESCTTCHHHHH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe---EEEEECCHHHHHHHh-------cCCeEEEcCCCCHHHHH
Confidence            357888887 8999999999988765   667777765433221       23556667777665543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.22  E-value=0.019  Score=47.63  Aligned_cols=84  Identities=15%  Similarity=0.164  Sum_probs=55.5

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecC-----------CCHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDL-----------TVESTI   94 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----------~~~~~v   94 (214)
                      +.+++|+|+|+ |.+|..+++.+...|++  |+++++++++++.+.+    .+.+  ++..|+           ...+..
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~--V~v~D~~~~~l~~~~~----lGa~--~~~l~~~~~~~~gya~~~~~~~~  252 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAK--TTGYDVRPEVAEQVRS----VGAQ--WLDLGIDAAGEGGYARELSEAER  252 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCE--EEEECSSGGGHHHHHH----TTCE--ECCCC-------------CHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHH----cCCe--EEeccccccccccchhhhhHHHH
Confidence            57889999999 79999999999999997  9999999876555433    2222  222111           001112


Q ss_pred             HHHHHHHHHHcCCccEEEECcccc
Q 028056           95 EASAKSIKEKYGSLNLLINASGIL  118 (214)
Q Consensus        95 ~~~~~~~~~~~~~vd~lv~nag~~  118 (214)
                      ..-.+.+.+.....|++|+++...
T Consensus       253 ~~~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          253 AQQQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHHHTTCSEEEECCCCT
T ss_pred             hhhHHHHHHHHhcCCEEEECCCCC
Confidence            222344455557899999987543

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.19  E-value=0.0056  Score=49.95  Aligned_cols=77  Identities=16%  Similarity=0.187  Sum_probs=49.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~--g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .|.+|+|+|+ |++|..++......  |++  |+++++++++.+.+.+    .+... .  .|..+.   .+..+++.+ 
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~--Vi~~~~~~~~~~~~~~----lGa~~-v--i~~~~~---~~~~~~~~~-  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNIT--IVGISRSKKHRDFALE----LGADY-V--SEMKDA---ESLINKLTD-  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCE--EEEECSCHHHHHHHHH----HTCSE-E--ECHHHH---HHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCE--EEEEeCCHHHHHHHHH----hCCCE-E--eccccc---hHHHHHhhc-
Confidence            7899999999 89999998777777  886  9999988766544332    23221 1  232220   122333332 


Q ss_pred             cCCccEEEECccc
Q 028056          105 YGSLNLLINASGI  117 (214)
Q Consensus       105 ~~~vd~lv~nag~  117 (214)
                      ...+|++|.++|.
T Consensus       236 g~g~D~vid~~g~  248 (344)
T 2h6e_A          236 GLGASIAIDLVGT  248 (344)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCccEEEECCCC
Confidence            2268999999874

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.19  E-value=0.0057  Score=50.95  Aligned_cols=81  Identities=19%  Similarity=0.207  Sum_probs=51.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+|+|.|+ |++|...+......|++ .|+++++++++++.+.    +.+.  ..  .|.++.+.+.+.+.++.. ..
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~-~Vi~~~~~~~~~~~a~----~lGa--~~--i~~~~~~~~~~~v~~~t~-g~  253 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAA-VVIVGDLNPARLAHAK----AQGF--EI--ADLSLDTPLHEQIAALLG-EP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHH----HTTC--EE--EETTSSSCHHHHHHHHHS-SS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCC-eEEEEcCCHHHHHHHH----HcCC--cE--EccCCcchHHHHHHHHhC-CC
Confidence            4789999995 99999988766678885 5888888876654332    2333  22  355443322222222211 12


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|++|.++|..
T Consensus       254 g~Dvvid~~G~~  265 (398)
T 1kol_A          254 EVDCAVDAVGFE  265 (398)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999853

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.18  E-value=0.015  Score=47.30  Aligned_cols=122  Identities=11%  Similarity=0.070  Sum_probs=64.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc-cchhhc--CCCceeEEEecCCCHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNR--FPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~-~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ++.+++.+.|+|+ |.+|.+++..|+..|.-..|++.++++++++.. .++...  ...++.... |  +.+        
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~~--------   72 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EYS--------   72 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG--------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cHH--------
Confidence            4456678999996 999999999999988733599999987655432 111111  111233222 1  111        


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                         .+...|++|..+|...        .+-     ++-...++.|+.-...+.+.+    .+...+     ..++++|..
T Consensus        73 ---a~~~aDiVvi~ag~~~--------kpG-----~tR~dL~~~N~~I~~~i~~~i----~~~~p~-----a~ilvvtNP  127 (326)
T 3vku_A           73 ---DAKDADLVVITAGAPQ--------KPG-----ETRLDLVNKNLKILKSIVDPI----VDSGFN-----GIFLVAANP  127 (326)
T ss_dssp             ---GGTTCSEEEECCCCC-----------------------------CHHHHHHHH----HTTTCC-----SEEEECSSS
T ss_pred             ---HhcCCCEEEECCCCCC--------CCC-----chHHHHHHHHHHHHHHHHHHH----HhcCCc-----eEEEEccCc
Confidence               2347899999999653        111     112234566665554444444    433222     377877765


Q ss_pred             cc
Q 028056          181 VG  182 (214)
Q Consensus       181 ~~  182 (214)
                      ..
T Consensus       128 vd  129 (326)
T 3vku_A          128 VD  129 (326)
T ss_dssp             HH
T ss_pred             hH
Confidence            43

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.17  E-value=0.0028  Score=52.46  Aligned_cols=78  Identities=17%  Similarity=0.218  Sum_probs=49.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH---
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE---  103 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~---  103 (214)
                      .|.+|||+|+ |++|...+......|+. .|+++++++++.+.+.+    .+...   ..|..+.+-    .+++.+   
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~~~----~~~i~~~~~  248 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGAT-TVILSTRQATKRRLAEE----VGATA---TVDPSAGDV----VEAIAGPVG  248 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCHHHHHHHHH----HTCSE---EECTTSSCH----HHHHHSTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCHHHHHHHHH----cCCCE---EECCCCcCH----HHHHHhhhh
Confidence            4789999998 89999999877778995 48888887765443222    23221   124444332    222222   


Q ss_pred             H-cCCccEEEECccc
Q 028056          104 K-YGSLNLLINASGI  117 (214)
Q Consensus       104 ~-~~~vd~lv~nag~  117 (214)
                      . .+.+|++|.++|.
T Consensus       249 ~~~gg~Dvvid~~G~  263 (370)
T 4ej6_A          249 LVPGGVDVVIECAGV  263 (370)
T ss_dssp             SSTTCEEEEEECSCC
T ss_pred             ccCCCCCEEEECCCC
Confidence            1 2368999988873

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.07  E-value=0.037  Score=41.87  Aligned_cols=77  Identities=9%  Similarity=0.141  Sum_probs=50.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ..++.+++.|.| .|.+|.+++..|++.|.+  |.+.+|+++.       .  ....+.++.+  . .+.++++++++..
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~--V~~~~~~~~~-------~--~~aD~vi~av--~-~~~~~~v~~~l~~   79 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHE--VTYYGSKDQA-------T--TLGEIVIMAV--P-YPALAALAKQYAT   79 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECTTCCC-------S--SCCSEEEECS--C-HHHHHHHHHHTHH
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCE--EEEEcCCHHH-------h--ccCCEEEEcC--C-cHHHHHHHHHHHH
Confidence            456677899999 789999999999999987  8889988751       1  1234444433  2 5667777877765


Q ss_pred             HcCCccEEEECcc
Q 028056          104 KYGSLNLLINASG  116 (214)
Q Consensus       104 ~~~~vd~lv~nag  116 (214)
                      ... =.++|++..
T Consensus        80 ~~~-~~~vi~~~~   91 (209)
T 2raf_A           80 QLK-GKIVVDITN   91 (209)
T ss_dssp             HHT-TSEEEECCC
T ss_pred             hcC-CCEEEEECC
Confidence            544 345666554

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.00  E-value=0.029  Score=44.84  Aligned_cols=80  Identities=11%  Similarity=0.052  Sum_probs=49.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      .+++.|.||.|.||.++++.|.+.|.+  |++++|+++.  ...+.+.  ...++++.+-.   ..+.++++++.....+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~--V~~~~~~~~~--~~~~~~~--~aDvVilavp~---~~~~~vl~~l~~~l~~   91 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYP--ISILDREDWA--VAESILA--NADVVIVSVPI---NLTLETIERLKPYLTE   91 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCC--EEEECTTCGG--GHHHHHT--TCSEEEECSCG---GGHHHHHHHHGGGCCT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCe--EEEEECCccc--CHHHHhc--CCCEEEEeCCH---HHHHHHHHHHHhhcCC
Confidence            357999999999999999999999997  8888887643  1111111  23455444322   2355666666443332


Q ss_pred             ccEEEECcc
Q 028056          108 LNLLINASG  116 (214)
Q Consensus       108 vd~lv~nag  116 (214)
                      =.++++.++
T Consensus        92 ~~iv~~~~s  100 (298)
T 2pv7_A           92 NMLLADLTS  100 (298)
T ss_dssp             TSEEEECCS
T ss_pred             CcEEEECCC
Confidence            234555544

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.96  E-value=0.0052  Score=49.78  Aligned_cols=39  Identities=31%  Similarity=0.340  Sum_probs=33.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~   70 (214)
                      +++|+|++|++|..++..+...|++  |+++++++++++.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~--vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYD--VVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCC--EEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHH
Confidence            8999999999999999888889997  99999887765543

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.95  E-value=0.042  Score=45.43  Aligned_cols=69  Identities=12%  Similarity=0.070  Sum_probs=49.5

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ....+.+.+|+++|.|++ .+|+.+++.+.+.|.+  +++++.++....  ....      -..+..|..|.+.+.++++
T Consensus         4 ~~~~~~~~~~~IlIlG~G-~lg~~la~aa~~lG~~--viv~d~~~~~p~--~~~a------d~~~~~~~~d~~~l~~~~~   72 (377)
T 3orq_A            4 MNFNKLKFGATIGIIGGG-QLGKMMAQSAQKMGYK--VVVLDPSEDCPC--RYVA------HEFIQAKYDDEKALNQLGQ   72 (377)
T ss_dssp             SSCCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESCTTCTT--GGGS------SEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEEECCCCChh--hhhC------CEEEECCCCCHHHHHHHHH
Confidence            344455678999999864 6999999999999997  777777654311  1111      1255688999888877765

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.94  E-value=0.012  Score=47.72  Aligned_cols=88  Identities=17%  Similarity=0.198  Sum_probs=56.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccch-------hhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL-------KNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      +.+++.|.|. |.+|..+++.|++.|.+  |++++|++++.+.+.+.       ..+.-....++-.-+.+...++.++.
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~--V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~  106 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYA--LQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLF  106 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCE--EEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHT
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCe--EEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHc
Confidence            4457888855 88999999999999997  99999988765443211       00100123344445566677777776


Q ss_pred             --HHHHHcCCccEEEECccc
Q 028056          100 --SIKEKYGSLNLLINASGI  117 (214)
Q Consensus       100 --~~~~~~~~vd~lv~nag~  117 (214)
                        ++.+...+-.++|++...
T Consensus       107 ~~~~~~~l~~~~~vi~~st~  126 (320)
T 4dll_A          107 AQGVAAAMKPGSLFLDMASI  126 (320)
T ss_dssp             TTCHHHHCCTTCEEEECSCC
T ss_pred             chhHHhhCCCCCEEEecCCC
Confidence              565555555677776653

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.94  E-value=0.028  Score=47.01  Aligned_cols=43  Identities=21%  Similarity=0.105  Sum_probs=37.0

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccccc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL   71 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~   71 (214)
                      +.+.+|+|+|+ |.+|..+++.+...|++  |+++++++.+++.+.
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~--V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAV--VSATDVRPAAKEQVA  230 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSTTHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHH
Confidence            56789999999 79999999999999997  999999987655443

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=95.94  E-value=0.008  Score=49.57  Aligned_cols=78  Identities=17%  Similarity=0.142  Sum_probs=49.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  105 (214)
                      .|++|||+|+ |++|..++......|++ .|+.+++++++++.+.+    .+... .  .|..+.+ +   .+++.+.. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~-~Vi~~~~~~~~~~~a~~----lGa~~-v--i~~~~~~-~---~~~~~~~~~  256 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGAS-IIIAVDIVESRLELAKQ----LGATH-V--INSKTQD-P---VAAIKEITD  256 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHH----HTCSE-E--EETTTSC-H---HHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCHHHHHHHHH----cCCCE-E--ecCCccC-H---HHHHHHhcC
Confidence            4789999995 89999998777778985 48888888765543322    23221 2  2433322 2   22222221 


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      +.+|++|.++|.
T Consensus       257 gg~D~vid~~g~  268 (371)
T 1f8f_A          257 GGVNFALESTGS  268 (371)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            368999999874

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.90  E-value=0.032  Score=44.73  Aligned_cols=38  Identities=24%  Similarity=0.329  Sum_probs=33.9

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      .+++||.++|.|.++-+|+.++..|.+.|+.  |.++.+.
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt--Vtv~~~~  198 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENAT--VTIVHSG  198 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCC
Confidence            5689999999999999999999999999997  7777663

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=95.86  E-value=0.0033  Score=47.55  Aligned_cols=38  Identities=16%  Similarity=0.259  Sum_probs=32.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      +++|+||+|.+|..+++.|++.|.+  |.+++|++++.+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~--V~~~~r~~~~~~~   39 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHE--IVVGSRREEKAEA   39 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCE--EEEEESSHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCE--EEEEeCCHHHHHH
Confidence            5789999999999999999999986  8889998765443

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.85  E-value=0.024  Score=45.00  Aligned_cols=85  Identities=12%  Similarity=0.087  Sum_probs=56.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCC---CcEEEEeecCCCCcccccchh---------hc-CCCceeEEEecCCCHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKND---KGCVIATCRNPNGATGLLDLK---------NR-FPERLDVLQLDLTVESTI   94 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~---~~~vi~~~r~~~~~~~~~~~~---------~~-~~~~~~~~~~Dl~~~~~v   94 (214)
                      .+++.|.|+ |.+|.++++.|++.|.   +  |++++|++++.+.+.+..         .. ....++++.+   .++.+
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~--V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~   76 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNR--ICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQI   76 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGG--EEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCe--EEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHH
Confidence            356778877 8999999999999997   6  999999987655432211         00 1224444433   35677


Q ss_pred             HHHHHHHHHH-cCCccEEEECcccc
Q 028056           95 EASAKSIKEK-YGSLNLLINASGIL  118 (214)
Q Consensus        95 ~~~~~~~~~~-~~~vd~lv~nag~~  118 (214)
                      .++++++... +.+=.++|++++..
T Consensus        77 ~~vl~~l~~~~l~~~~iiiS~~agi  101 (280)
T 3tri_A           77 KMVCEELKDILSETKILVISLAVGV  101 (280)
T ss_dssp             HHHHHHHHHHHHTTTCEEEECCTTC
T ss_pred             HHHHHHHHhhccCCCeEEEEecCCC
Confidence            8888888765 44334888877644

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=95.83  E-value=0.025  Score=46.30  Aligned_cols=86  Identities=16%  Similarity=0.110  Sum_probs=51.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc------ccchhhcCCCceeEEEecCCCHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG------LLDLKNRFPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~------~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      ..+.||++.|.|. |.||.++|+.+...|.+  |+..+|++.....      +.+.+.  ...+.++.+-++  ++.+.+
T Consensus       167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~--V~~~dr~~~~~~~~~~~~sl~ell~--~aDvVil~vP~t--~~t~~l  239 (340)
T 4dgs_A          167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMS--VRYWNRSTLSGVDWIAHQSPVDLAR--DSDVLAVCVAAS--AATQNI  239 (340)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCE--EEEECSSCCTTSCCEECSSHHHHHH--TCSEEEECC-----------
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEcCCcccccCceecCCHHHHHh--cCCEEEEeCCCC--HHHHHH
Confidence            5789999999987 78999999999999997  9999988764221      112221  234555544433  333444


Q ss_pred             H-HHHHHHcCCccEEEECcc
Q 028056           98 A-KSIKEKYGSLNLLINASG  116 (214)
Q Consensus        98 ~-~~~~~~~~~vd~lv~nag  116 (214)
                      + ++..+...+=.++||.+-
T Consensus       240 i~~~~l~~mk~gailIN~aR  259 (340)
T 4dgs_A          240 VDASLLQALGPEGIVVNVAR  259 (340)
T ss_dssp             -CHHHHHHTTTTCEEEECSC
T ss_pred             hhHHHHhcCCCCCEEEECCC
Confidence            4 344444444456666664

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.81  E-value=0.01  Score=45.61  Aligned_cols=39  Identities=21%  Similarity=0.263  Sum_probs=33.3

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..+++||.+||.||+ .+|...++.|++.|++  |++++.+.
T Consensus        26 fl~L~gk~VLVVGgG-~va~~ka~~Ll~~GA~--VtVvap~~   64 (223)
T 3dfz_A           26 MLDLKGRSVLVVGGG-TIATRRIKGFLQEGAA--ITVVAPTV   64 (223)
T ss_dssp             EECCTTCCEEEECCS-HHHHHHHHHHGGGCCC--EEEECSSC
T ss_pred             EEEcCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEEECCCC
Confidence            367899999999985 7999999999999998  77777543

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=95.78  E-value=0.0048  Score=50.53  Aligned_cols=78  Identities=14%  Similarity=0.149  Sum_probs=48.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  105 (214)
                      .|.+|+|+|+ |++|...+......|+. .|+++++++++++.+.+    .+.. ..  .|..+.+-    .+++.+.. 
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~-~Vi~~~~~~~~~~~~~~----lGa~-~v--i~~~~~~~----~~~v~~~t~  232 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAG-RIFAVGSRKHCCDIALE----YGAT-DI--INYKNGDI----VEQILKATD  232 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCS-SEEEECCCHHHHHHHHH----HTCC-EE--ECGGGSCH----HHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCc-EEEEECCCHHHHHHHHH----hCCc-eE--EcCCCcCH----HHHHHHHcC
Confidence            4789999985 89999999877778983 38888887765443322    2322 12  23333222    23333322 


Q ss_pred             -CCccEEEECccc
Q 028056          106 -GSLNLLINASGI  117 (214)
Q Consensus       106 -~~vd~lv~nag~  117 (214)
                       ..+|++|.+.|.
T Consensus       233 g~g~D~v~d~~g~  245 (352)
T 3fpc_A          233 GKGVDKVVIAGGD  245 (352)
T ss_dssp             TCCEEEEEECSSC
T ss_pred             CCCCCEEEECCCC
Confidence             258999998875

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.77  E-value=0.008  Score=50.59  Aligned_cols=37  Identities=16%  Similarity=0.216  Sum_probs=31.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      ..|+|.|. |.+|..+++.|.+.|..  |++++++++..+
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~--vvvId~d~~~v~   41 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVK--MVVLDHDPDHIE   41 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCC--EEEEECCHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCC--EEEEECCHHHHH
Confidence            45888886 78999999999999998  999998876543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=95.77  E-value=0.043  Score=44.59  Aligned_cols=41  Identities=15%  Similarity=-0.082  Sum_probs=34.2

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      ++.+.+.|+|+ |.+|.+++..|+..|.. .|+++++++++++
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~-~v~L~Di~~~~~~   45 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELG-DVVLFDIAEGTPQ   45 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHH
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeCCchhHH
Confidence            45568999998 99999999999999883 4999999987654

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.76  E-value=0.023  Score=45.66  Aligned_cols=88  Identities=14%  Similarity=0.015  Sum_probs=55.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh-------hcCCCceeEEEecCCCHHHHHHHH-
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-------NRFPERLDVLQLDLTVESTIEASA-   98 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~Dl~~~~~v~~~~-   98 (214)
                      +.+++.|.| .|.+|..+++.|++.|.+  |++++|++++.+.+.+.-       .+.-....++-.-+.+...+++++ 
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~--V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~   96 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNGFK--VTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVF   96 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHh
Confidence            335777886 579999999999999997  999999987755432210       000012233444455666677666 


Q ss_pred             --HHHHHHcCCccEEEECccc
Q 028056           99 --KSIKEKYGSLNLLINASGI  117 (214)
Q Consensus        99 --~~~~~~~~~vd~lv~nag~  117 (214)
                        +++.....+=.++|++...
T Consensus        97 ~~~~l~~~l~~g~~vv~~st~  117 (310)
T 3doj_A           97 DKGGVLEQICEGKGYIDMSTV  117 (310)
T ss_dssp             STTCGGGGCCTTCEEEECSCC
T ss_pred             CchhhhhccCCCCEEEECCCC
Confidence              5554444444666776643

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.72  E-value=0.03  Score=43.75  Aligned_cols=90  Identities=18%  Similarity=0.195  Sum_probs=55.2

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccch--------hhcCCCceeEEEecCCCHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--------KNRFPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      +.+.++.|.|+ |.+|..++..|++.|.+ .|.+++|++++.+.+.+.        ..+.-.++.++-.-+ ....+.++
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~-~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av-~~~~~~~v   84 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFR-IVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSL-KDSAFAEL   84 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECC-CHHHHHHH
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCe-EEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEec-CHHHHHHH
Confidence            33446888886 89999999999999986 577888887654433221        111111222222222 23456777


Q ss_pred             HHHHHHHcCCccEEEECcccc
Q 028056           98 AKSIKEKYGSLNLLINASGIL  118 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~  118 (214)
                      ++++....++=.++|++....
T Consensus        85 ~~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           85 LQGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHHhhcCCCcEEEECCCCC
Confidence            877765544445788887654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=95.72  E-value=0.0047  Score=49.92  Aligned_cols=74  Identities=16%  Similarity=0.233  Sum_probs=47.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+++|+||+|++|..++..+...|++  |+.+++++ +.+    ...+.+... .  .|..+.+.+.       +...
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~--vi~~~~~~-~~~----~~~~lGa~~-~--i~~~~~~~~~-------~~~~  214 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTT--VITTASKR-NHA----FLKALGAEQ-C--INYHEEDFLL-------AIST  214 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEECHH-HHH----HHHHHTCSE-E--EETTTSCHHH-------HCCS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCE--EEEEeccc-hHH----HHHHcCCCE-E--EeCCCcchhh-------hhcc
Confidence            5789999999999999999888888996  77776433 222    222233321 2  2444433221       1124


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|+++.+.|.
T Consensus       215 g~D~v~d~~g~  225 (321)
T 3tqh_A          215 PVDAVIDLVGG  225 (321)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCCEEEECCCc
Confidence            78999998874

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.70  E-value=0.017  Score=45.79  Aligned_cols=86  Identities=21%  Similarity=0.133  Sum_probs=56.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccch-h------hcCCCceeEEEecCCCHHHHHHHH---
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL-K------NRFPERLDVLQLDLTVESTIEASA---   98 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~-~------~~~~~~~~~~~~Dl~~~~~v~~~~---   98 (214)
                      +++.|.|. |.+|..+++.|++.|.+  |++++|++++.+.+.+. .      .+.-.+..++-.-+.+...+++++   
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~--V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~   78 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCS--VTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGK   78 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHST
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCe--EEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCc
Confidence            46778874 89999999999999987  99999998776543221 0      000012334444556667777777   


Q ss_pred             HHHHHHcCCccEEEECccc
Q 028056           99 KSIKEKYGSLNLLINASGI  117 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~  117 (214)
                      +++.....+=.++|++.+.
T Consensus        79 ~~l~~~l~~~~~vi~~st~   97 (287)
T 3pef_A           79 HGVLEGIGEGRGYVDMSTV   97 (287)
T ss_dssp             TCHHHHCCTTCEEEECSCC
T ss_pred             chHhhcCCCCCEEEeCCCC
Confidence            6666655555677777543

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=95.69  E-value=0.18  Score=35.44  Aligned_cols=86  Identities=22%  Similarity=0.169  Sum_probs=53.5

Q ss_pred             ccCcEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecCCCCccc--ccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           26 WKGGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        26 l~~k~vlItG~s---~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ++-+++.|.|+|   +.+|..+++.|.+.|++  |...+.+.+....  ......+....+..+..=+. .+.+.+++++
T Consensus        12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~--V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~~~   88 (138)
T 1y81_A           12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFE--VLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVAKE   88 (138)
T ss_dssp             --CCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTCSEETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHHHH
T ss_pred             cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCE--EEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHHHH
Confidence            345789999997   78999999999999996  7776665433211  22222333334444444444 5778888887


Q ss_pred             HHHHcCCccEEEECcc
Q 028056          101 IKEKYGSLNLLINASG  116 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag  116 (214)
                      +.+.  .+..++...+
T Consensus        89 ~~~~--g~~~i~~~~~  102 (138)
T 1y81_A           89 AVEA--GFKKLWFQPG  102 (138)
T ss_dssp             HHHT--TCCEEEECTT
T ss_pred             HHHc--CCCEEEEcCc
Confidence            7663  3455655554

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.67  E-value=0.021  Score=46.42  Aligned_cols=80  Identities=16%  Similarity=0.157  Sum_probs=49.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|++++|+|+ |++|...+..+...|+. .++++++++++++.+    ++.+... .+  |..+.+ ..+..+++.+ ..
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~-~vi~~~~~~~k~~~a----~~lGa~~-~i--~~~~~~-~~~~~~~~~~-~~  228 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAK-SVTAIDISSEKLALA----KSFGAMQ-TF--NSSEMS-APQMQSVLRE-LR  228 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHH----HHTTCSE-EE--ETTTSC-HHHHHHHHGG-GC
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCc-EEEEEechHHHHHHH----HHcCCeE-EE--eCCCCC-HHHHHHhhcc-cC
Confidence            5799999987 89999999888888987 567888877654432    2233322 22  333322 2222333322 24


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|+++.+.|.
T Consensus       229 g~d~v~d~~G~  239 (346)
T 4a2c_A          229 FNQLILETAGV  239 (346)
T ss_dssp             SSEEEEECSCS
T ss_pred             Ccccccccccc
Confidence            57888877763

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.67  E-value=0.017  Score=50.66  Aligned_cols=38  Identities=16%  Similarity=0.115  Sum_probs=32.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      ..+++++|+|.|++ |+|..+++.|+..|.. ++.++|.+
T Consensus       323 ~kL~~~kVLIVGaG-GLGs~va~~La~aGVG-~ItLvD~D  360 (598)
T 3vh1_A          323 DIIKNTKVLLLGAG-TLGCYVSRALIAWGVR-KITFVDNG  360 (598)
T ss_dssp             HHHHTCEEEEECCS-HHHHHHHHHHHTTTCC-EEEEECCS
T ss_pred             HHHhCCeEEEECCC-HHHHHHHHHHHHcCCC-EEEEECCC
Confidence            45778999999865 8999999999999997 78888664

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.65  E-value=0.018  Score=45.64  Aligned_cols=83  Identities=17%  Similarity=0.241  Sum_probs=51.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccch------hhc--CCCceeEEEecCCCHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL------KNR--FPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~------~~~--~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .++.|.|++|.+|..+++.|++.|.+  |++++|++++.+.+.+.      ..+  ....++++  -+ .++.+.+++++
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~--V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~--av-~~~~~~~v~~~   86 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHH--LAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVL--AL-PDNIIEKVAED   86 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSE--EEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEE--CS-CHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEE--cC-CchHHHHHHHH
Confidence            47999999999999999999999986  88999987654432210      000  01122222  22 23446777777


Q ss_pred             HHHHcCCccEEEECcc
Q 028056          101 IKEKYGSLNLLINASG  116 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag  116 (214)
                      +.....+=.++|++..
T Consensus        87 l~~~l~~~~ivv~~s~  102 (286)
T 3c24_A           87 IVPRVRPGTIVLILDA  102 (286)
T ss_dssp             HGGGSCTTCEEEESCS
T ss_pred             HHHhCCCCCEEEECCC
Confidence            7654433346666543

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.62  E-value=0.047  Score=44.17  Aligned_cols=75  Identities=13%  Similarity=0.144  Sum_probs=45.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhc--CCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNR--FPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      ..+.|+|+ |.+|..++..|+..|.-..|++.|.++++++. ..++...  ...++.+. .  .+.+           .+
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~~-----------a~   72 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDYS-----------DV   72 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCHH-----------Hh
Confidence            46888898 99999999999999863359999999877664 2222211  11122111 1  1211           23


Q ss_pred             CCccEEEECcccc
Q 028056          106 GSLNLLINASGIL  118 (214)
Q Consensus       106 ~~vd~lv~nag~~  118 (214)
                      ..-|++|..+|..
T Consensus        73 ~~aDvVii~~g~p   85 (318)
T 1y6j_A           73 KDCDVIVVTAGAN   85 (318)
T ss_dssp             TTCSEEEECCCC-
T ss_pred             CCCCEEEEcCCCC
Confidence            4789999999864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.61  E-value=0.0077  Score=50.20  Aligned_cols=81  Identities=20%  Similarity=0.193  Sum_probs=51.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+|+|.|+ |++|..++......|+. .|+++++++++++.+.    +.+.  ..  .|..+.+.+.+.+.++.. ..
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~-~Vi~~~~~~~~~~~a~----~lGa--~~--i~~~~~~~~~~~~~~~~~-g~  253 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAA-CVIVGDQNPERLKLLS----DAGF--ET--IDLRNSAPLRDQIDQILG-KP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHH----TTTC--EE--EETTSSSCHHHHHHHHHS-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHHHH----HcCC--cE--EcCCCcchHHHHHHHHhC-CC
Confidence            4789999996 99999998777778984 4999998876654332    2333  22  355443221222222211 12


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|++|.++|..
T Consensus       254 g~Dvvid~~g~~  265 (398)
T 2dph_A          254 EVDCGVDAVGFE  265 (398)
T ss_dssp             CEEEEEECSCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999853

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.49  E-value=0.054  Score=42.17  Aligned_cols=78  Identities=10%  Similarity=0.170  Sum_probs=54.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      +++|.|++|.+|+.+++.+.+. +.. .+.+.+++ ..++   +.+..   +.. +..|+++++.+.+.+..+.+.  .+
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~e-lva~~d~~-~dl~---~~~~~---~~D-vvIDfT~p~a~~~~~~~a~~~--g~   70 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLT-LSAELDAG-DPLS---LLTDG---NTE-VVIDFTHPDVVMGNLEFLIDN--GI   70 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCE-EEEEECTT-CCTH---HHHHT---TCC-EEEECSCTTTHHHHHHHHHHT--TC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCE-EEEEEccC-CCHH---HHhcc---CCc-EEEEccChHHHHHHHHHHHHc--CC
Confidence            5899999999999999998765 665 33344443 2222   22221   122 557999999988888877665  68


Q ss_pred             cEEEECcccc
Q 028056          109 NLLINASGIL  118 (214)
Q Consensus       109 d~lv~nag~~  118 (214)
                      ++|+-..|..
T Consensus        71 ~~VigTTG~~   80 (245)
T 1p9l_A           71 HAVVGTTGFT   80 (245)
T ss_dssp             EEEECCCCCC
T ss_pred             CEEEcCCCCC
Confidence            8888888743

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=95.48  E-value=0.088  Score=43.56  Aligned_cols=66  Identities=14%  Similarity=0.047  Sum_probs=46.2

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      .+.+.+|+++|.|++ .+|+.+++.+.+.|.+  |++++.++.....  ..      .-..+..|..|.+.+.++++
T Consensus         9 ~~~~~~k~IlIlG~G-~~g~~la~aa~~~G~~--vi~~d~~~~~~~~--~~------ad~~~~~~~~d~~~l~~~~~   74 (389)
T 3q2o_A            9 RIILPGKTIGIIGGG-QLGRMMALAAKEMGYK--IAVLDPTKNSPCA--QV------ADIEIVASYDDLKAIQHLAE   74 (389)
T ss_dssp             CCCCTTSEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSTTCTTT--TT------CSEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCC-HHHHHHHHHHHHcCCE--EEEEeCCCCCchH--Hh------CCceEecCcCCHHHHHHHHH
Confidence            345789999999876 4999999999999998  7777766542110  00      01234568888887776665

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.47  E-value=0.016  Score=46.03  Aligned_cols=39  Identities=23%  Similarity=0.301  Sum_probs=34.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      .+++||.++|.|.++-+|+.+|..|++.|+.  |.++.+..
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAt--Vtv~h~~t  194 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGAT--VSVCHIKT  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCe--EEEEeCCc
Confidence            5689999999999999999999999999997  77776543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.46  E-value=0.024  Score=46.18  Aligned_cols=79  Identities=13%  Similarity=0.093  Sum_probs=47.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+++|+|+ |++|...+......|.. .|+++++++++.+.+.    +.+... .+  |-.+ + ..+.+.++.. ..
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~-~Vi~~~~~~~~~~~~~----~lGa~~-~i--~~~~-~-~~~~v~~~t~-g~  238 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAA-RVIAVDLDDDRLALAR----EVGADA-AV--KSGA-G-AADAIRELTG-GQ  238 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCC-EEEEEESCHHHHHHHH----HTTCSE-EE--ECST-T-HHHHHHHHHG-GG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCHHHHHHHH----HcCCCE-EE--cCCC-c-HHHHHHHHhC-CC
Confidence            4789999998 99999888655556443 4999998886655332    233322 22  2222 2 2222222221 12


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|+++.+.|.
T Consensus       239 g~d~v~d~~G~  249 (345)
T 3jv7_A          239 GATAVFDFVGA  249 (345)
T ss_dssp             CEEEEEESSCC
T ss_pred             CCeEEEECCCC
Confidence            69999999984

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=95.44  E-value=0.07  Score=43.46  Aligned_cols=81  Identities=17%  Similarity=0.179  Sum_probs=50.7

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhh--cCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN--RFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ....+.+.|+|+ |.+|..++..++..|.-..|++.++++++++. ..++..  .+......+..  .|.++        
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~~--------   84 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYSV--------   84 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGGG--------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHHH--------
Confidence            345678999997 89999999999999873259999998765543 222211  11222222222  12221        


Q ss_pred             HHHcCCccEEEECccccC
Q 028056          102 KEKYGSLNLLINASGILS  119 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~  119 (214)
                         +..-|++|..+|...
T Consensus        85 ---~~~aDiVvi~aG~~~   99 (331)
T 4aj2_A           85 ---TANSKLVIITAGARQ   99 (331)
T ss_dssp             ---GTTEEEEEECCSCCC
T ss_pred             ---hCCCCEEEEccCCCC
Confidence               237899999999753

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.44  E-value=0.06  Score=43.08  Aligned_cols=117  Identities=13%  Similarity=0.085  Sum_probs=67.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhh---cCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN---RFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .+.|+|+ |.+|.+++..|+..|.-..|++++++++.++. ..++..   ..+........  +|.+.+           
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a~-----------   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL-----------   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGGG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHHh-----------
Confidence            4789999 99999999999999872249999998876542 111111   12222222211  122222           


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ..-|++|..+|...      .++    .+..+   .+..|    .-+.+.+.+.+.+...+     ..++++|....
T Consensus        68 ~~aDiVViaag~~~------kpG----~~R~d---l~~~N----~~i~~~i~~~i~~~~p~-----a~iivvsNPvd  122 (294)
T 1oju_A           68 KGSEIIVVTAGLAR------KPG----MTRLD---LAHKN----AGIIKDIAKKIVENAPE-----SKILVVTNPMD  122 (294)
T ss_dssp             TTCSEEEECCCCCC------CSS----CCHHH---HHHHH----HHHHHHHHHHHHTTSTT-----CEEEECSSSHH
T ss_pred             CCCCEEEECCCCCC------CCC----CcHHH---HHHHH----HHHHHHHHHHHHhhCCC-----eEEEEeCCcch
Confidence            36799999999753      111    11111   23333    44556666666655333     37888876543

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.40  E-value=0.049  Score=46.71  Aligned_cols=87  Identities=14%  Similarity=0.071  Sum_probs=54.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh-------------------------------hcC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-------------------------------NRF   77 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~-------------------------------~~~   77 (214)
                      ++|.|.|+ |-+|..+|..|++.|.+  |++.+++++.++...+.+                               ...
T Consensus         6 ~kVgVIGa-G~MG~~IA~~la~aG~~--V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~   82 (483)
T 3mog_A            6 QTVAVIGS-GTMGAGIAEVAASHGHQ--VLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHAL   82 (483)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCC--EEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGG
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCe--EEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHh
Confidence            45666665 89999999999999998  999999987655422110                               000


Q ss_pred             CCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECcccc
Q 028056           78 PERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGIL  118 (214)
Q Consensus        78 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd~lv~nag~~  118 (214)
                      ...-.++.+-..+.+..+.+++++.+..++=.+++.|....
T Consensus        83 ~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti  123 (483)
T 3mog_A           83 AAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSI  123 (483)
T ss_dssp             GGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred             cCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCC
Confidence            01111233444455555678888877665445665666543

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.39  E-value=0.016  Score=46.95  Aligned_cols=42  Identities=14%  Similarity=-0.001  Sum_probs=36.7

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~   67 (214)
                      ...+.||++.|.|. |.||.++|+.+...|.+  |+..+|++...
T Consensus       134 ~~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~--V~~~dr~~~~~  175 (315)
T 3pp8_A          134 EYTREEFSVGIMGA-GVLGAKVAESLQAWGFP--LRCWSRSRKSW  175 (315)
T ss_dssp             CCCSTTCCEEEECC-SHHHHHHHHHHHTTTCC--EEEEESSCCCC
T ss_pred             CCCcCCCEEEEEee-CHHHHHHHHHHHHCCCE--EEEEcCCchhh
Confidence            46789999999987 68999999999999998  99999987643

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.37  E-value=0.01  Score=47.91  Aligned_cols=40  Identities=28%  Similarity=0.270  Sum_probs=33.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~   70 (214)
                      ++ ++|+|++|++|..++......|++  |+.+++++++.+.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~--Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQ--VAAVSGRESTHGYL  187 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCC--EEEEESCGGGHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHH
Confidence            35 999999999999999888889997  99999888765543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=95.37  E-value=0.032  Score=45.12  Aligned_cols=39  Identities=23%  Similarity=0.011  Sum_probs=33.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      |.++.+.+.|+|+ |.+|..++..++..|. ..|++.++++
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~-~~v~l~D~~~   42 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKEL-ADVVLVDIPQ   42 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCGG
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeccc
Confidence            4556788999997 9999999999999998 2599999983

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=95.34  E-value=0.092  Score=42.56  Aligned_cols=40  Identities=20%  Similarity=0.013  Sum_probs=33.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      +.+.+.|+|+ |.+|.+++..|+..|.. .|++.++++++++
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~-~v~l~Di~~~~~~   43 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLG-DVVLFDIAQGMPN   43 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCc-eEEEEeCChHHHH
Confidence            3467888884 99999999999998873 4999999987654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.34  E-value=0.24  Score=39.96  Aligned_cols=77  Identities=18%  Similarity=0.275  Sum_probs=47.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEe-cCCCHHHHHHHHHHHHHHcC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQL-DLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~-Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +|.|+||+|.+|.+++..|+.. +.-..++++++++ ..+. ..++. ........... .-.+.+++           .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~-~~~~~~~v~~~~~~~~~~~~-----------~   68 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLS-HIPTAVKIKGFSGEDATPAL-----------E   68 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHH-TSCSSEEEEEECSSCCHHHH-----------T
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhh-CCCCCceEEEecCCCcHHHh-----------C
Confidence            5789999999999999999876 5432599999987 4332 22222 22222222111 11122222           3


Q ss_pred             CccEEEECccccC
Q 028056          107 SLNLLINASGILS  119 (214)
Q Consensus       107 ~vd~lv~nag~~~  119 (214)
                      ..|++|..+|...
T Consensus        69 ~aDivii~ag~~r   81 (312)
T 3hhp_A           69 GADVVLISAGVAR   81 (312)
T ss_dssp             TCSEEEECCSCSC
T ss_pred             CCCEEEEeCCCCC
Confidence            7899999999753

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.34  E-value=0.0075  Score=49.89  Aligned_cols=41  Identities=22%  Similarity=0.263  Sum_probs=35.6

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      +++||+++|.|. |.+|..+|+.|.+.|++  |++.+++.++++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~Gak--Vvv~D~~~~~l~  210 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAK--LVVTDVNKAAVS  210 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCE--EEEEcCCHHHHH
Confidence            689999999997 78999999999999997  888888765444

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.34  E-value=0.022  Score=51.94  Aligned_cols=76  Identities=13%  Similarity=0.134  Sum_probs=47.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  105 (214)
                      .|.+|||.||+|++|...+.-....|++  |+.+++++ +.+.+.     .+... .+  |-.+.+-    .+++.+.- 
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~--V~~t~~~~-k~~~l~-----lga~~-v~--~~~~~~~----~~~i~~~t~  409 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAE--VYATASED-KWQAVE-----LSREH-LA--SSRTCDF----EQQFLGATG  409 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCC--EEEECCGG-GGGGSC-----SCGGG-EE--CSSSSTH----HHHHHHHSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCE--EEEEeChH-Hhhhhh-----cChhh-ee--ecCChhH----HHHHHHHcC
Confidence            4799999999999999999777778997  88777654 322221     22221 22  3333322    22333321 


Q ss_pred             -CCccEEEECccc
Q 028056          106 -GSLNLLINASGI  117 (214)
Q Consensus       106 -~~vd~lv~nag~  117 (214)
                       ..+|+++++.|.
T Consensus       410 g~GvDvVld~~gg  422 (795)
T 3slk_A          410 GRGVDVVLNSLAG  422 (795)
T ss_dssp             SSCCSEEEECCCT
T ss_pred             CCCeEEEEECCCc
Confidence             369999998864

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.33  E-value=0.0071  Score=46.07  Aligned_cols=38  Identities=24%  Similarity=0.296  Sum_probs=31.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      .+++.|.| +|.+|..+++.|++.|.+  |++.+|++++.+
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~--V~~~~r~~~~~~   65 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFK--VVVGSRNPKRTA   65 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCC--EEEEESSHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCE--EEEEeCCHHHHH
Confidence            35688888 899999999999999987  888999876544

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.31  E-value=0.0068  Score=48.05  Aligned_cols=43  Identities=26%  Similarity=0.193  Sum_probs=36.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      .++++++++|.|+ |++|+++++.|.+.|++  |.+++|++++.+.
T Consensus       125 ~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~--V~v~~r~~~~~~~  167 (275)
T 2hk9_A          125 PEVKEKSILVLGA-GGASRAVIYALVKEGAK--VFLWNRTKEKAIK  167 (275)
T ss_dssp             TTGGGSEEEEECC-SHHHHHHHHHHHHHTCE--EEEECSSHHHHHH
T ss_pred             CCcCCCEEEEECc-hHHHHHHHHHHHHcCCE--EEEEECCHHHHHH
Confidence            3578899999996 79999999999999985  9999998765443

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.20  E-value=0.016  Score=51.25  Aligned_cols=39  Identities=31%  Similarity=0.301  Sum_probs=33.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      ..|++.+|+|.|+ ||+|..+++.|+..|.. ++.+++.+.
T Consensus        13 ~kL~~s~VlVVGa-GGLGsevak~La~aGVG-~ItlvD~D~   51 (640)
T 1y8q_B           13 EAVAGGRVLVVGA-GGIGCELLKNLVLTGFS-HIDLIDLDT   51 (640)
T ss_dssp             HHHHHCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEEECCB
T ss_pred             HHHhcCeEEEECc-CHHHHHHHHHHHHcCCC-eEEEecCCE
Confidence            3466789999987 79999999999999997 788888654

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.08  E-value=0.035  Score=44.02  Aligned_cols=39  Identities=18%  Similarity=0.233  Sum_probs=32.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhc--CCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEK--NDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~--g~~~~vi~~~r~~   64 (214)
                      .+++||.++|.|++.-+|+.+++.|.+.  |++  |.++.+..
T Consensus       154 i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~at--Vtv~h~~t  194 (281)
T 2c2x_A          154 ISIAGAHVVVIGRGVTVGRPLGLLLTRRSENAT--VTLCHTGT  194 (281)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCE--EEEECTTC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCE--EEEEECch
Confidence            4789999999999998999999999999  675  77665443

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.07  E-value=0.02  Score=46.57  Aligned_cols=40  Identities=23%  Similarity=0.159  Sum_probs=30.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      .|.+++|.|+ |++|...+..+...|.. .|+.+++++++++
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~-~Vi~~~~~~~r~~  202 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGA-KVIAVDINQDKLN  202 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCC-EEEEEESCHHHHH
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCC-EEEEEECcHHHhh
Confidence            4789999987 78888777777666544 5999998876543

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.07  E-value=0.039  Score=43.74  Aligned_cols=85  Identities=19%  Similarity=0.126  Sum_probs=52.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh-------hcCCCceeEEEecCCCHHHHHHHH---H
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-------NRFPERLDVLQLDLTVESTIEASA---K   99 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~Dl~~~~~v~~~~---~   99 (214)
                      ++.|.| .|.+|..+++.|++.|.+  |.+++|++++.+.+.+.-       .+.-.+..++-.-+.+...+++++   +
T Consensus         3 ~I~iiG-~G~mG~~~a~~l~~~G~~--V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~   79 (287)
T 3pdu_A            3 TYGFLG-LGIMGGPMAANLVRAGFD--VTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGAN   79 (287)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHHHTCC--EEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTT
T ss_pred             eEEEEc-cCHHHHHHHHHHHHCCCe--EEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCch
Confidence            466676 789999999999999998  999999988765432210       000012233444455566666666   5


Q ss_pred             HHHHHcCCccEEEECccc
Q 028056          100 SIKEKYGSLNLLINASGI  117 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~  117 (214)
                      ++.+...+-.++|++...
T Consensus        80 ~l~~~l~~g~~vv~~st~   97 (287)
T 3pdu_A           80 GVLEGIGGGRGYIDMSTV   97 (287)
T ss_dssp             CGGGTCCTTCEEEECSCC
T ss_pred             hhhhcccCCCEEEECCCC
Confidence            554444444566666543

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=95.06  E-value=0.13  Score=41.06  Aligned_cols=85  Identities=20%  Similarity=0.163  Sum_probs=49.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccch-------hhcCCCceeEEEecCCCHHHHHHHH-HHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL-------KNRFPERLDVLQLDLTVESTIEASA-KSI  101 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dl~~~~~v~~~~-~~~  101 (214)
                      +|-+.| -|-+|..+|+.|++.|++  |++++|++++.+.+.+.       ..+.-.+..++-+-+.+.+.+++.+ .++
T Consensus         7 kIgfIG-LG~MG~~mA~~L~~~G~~--V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~   83 (297)
T 4gbj_A            7 KIAFLG-LGNLGTPIAEILLEAGYE--LVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMEL   83 (297)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCE--EEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHH
T ss_pred             cEEEEe-cHHHHHHHHHHHHHCCCe--EEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHH
Confidence            455565 578999999999999997  99999999876653321       1111123344555566777766654 445


Q ss_pred             HHHcCCccEEEECccc
Q 028056          102 KEKYGSLNLLINASGI  117 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~  117 (214)
                      .....+-+++|.+...
T Consensus        84 ~~~~~~~~iiid~sT~   99 (297)
T 4gbj_A           84 VEKLGKDGVHVSMSTI   99 (297)
T ss_dssp             HHHHCTTCEEEECSCC
T ss_pred             HhhcCCCeEEEECCCC
Confidence            5555566677766643

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.97  E-value=0.051  Score=44.73  Aligned_cols=86  Identities=10%  Similarity=0.172  Sum_probs=54.0

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccc-----------hhhcC-CCceeEEEecCCCHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-----------LKNRF-PERLDVLQLDLTVEST   93 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~-----------~~~~~-~~~~~~~~~Dl~~~~~   93 (214)
                      ++++++.|.| .|.+|..+|+.|++.|.+  |++++|++++.+.+.+           ..... ...++++  -+.+. .
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~--V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~--~vp~~-~   93 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHE--CVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWL--MVPAA-V   93 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEE--CSCGG-G
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCE--EEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEE--eCCHH-H
Confidence            5567888887 689999999999999987  9999998765443211           11111 0123333  33333 6


Q ss_pred             HHHHHHHHHHHcCCccEEEECccc
Q 028056           94 IEASAKSIKEKYGSLNLLINASGI  117 (214)
Q Consensus        94 v~~~~~~~~~~~~~vd~lv~nag~  117 (214)
                      ++++++++.....+=+++|++...
T Consensus        94 v~~vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           94 VDSMLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             HHHHHHHHGGGCCTTCEEEECSSC
T ss_pred             HHHHHHHHHhhCCCCCEEEeCCCC
Confidence            677777776655555677776654

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=94.97  E-value=0.036  Score=44.36  Aligned_cols=86  Identities=15%  Similarity=0.149  Sum_probs=54.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccch--------hhcCCCceeEEEecCCCHHHHHHHH--
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--------KNRFPERLDVLQLDLTVESTIEASA--   98 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~~~~~v~~~~--   98 (214)
                      +++.|.| .|.+|..+++.|++.|.+  |++++|++++.+.+.+.        ..+.-....++-.-+.+.+.++.++  
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~--V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~   84 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLS--TWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFG   84 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC-
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCe--EEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhC
Confidence            4677775 689999999999999997  99999988655432211        1111123344444556666676665  


Q ss_pred             -HHHHHHcCCccEEEECccc
Q 028056           99 -KSIKEKYGSLNLLINASGI  117 (214)
Q Consensus        99 -~~~~~~~~~vd~lv~nag~  117 (214)
                       +++.....+=.++|++...
T Consensus        85 ~~~l~~~l~~g~ivv~~st~  104 (303)
T 3g0o_A           85 EDGVAHLMKPGSAVMVSSTI  104 (303)
T ss_dssp             -CCCGGGSCTTCEEEECSCC
T ss_pred             hhhHHhhCCCCCEEEecCCC
Confidence             5554444444667766643

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=94.88  E-value=0.02  Score=46.60  Aligned_cols=41  Identities=12%  Similarity=0.022  Sum_probs=36.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~   67 (214)
                      ..+.|+++.|.|. |.||..+|+.+...|.+  |+..+++.++.
T Consensus       151 ~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~--V~~~d~~~~~~  191 (330)
T 2gcg_A          151 YGLTQSTVGIIGL-GRIGQAIARRLKPFGVQ--RFLYTGRQPRP  191 (330)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCC--EEEEESSSCCH
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCE--EEEECCCCcch
Confidence            5688999999987 89999999999999998  99999887653

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=94.85  E-value=0.02  Score=48.50  Aligned_cols=37  Identities=24%  Similarity=0.202  Sum_probs=31.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      .+++++|+|.|+ ||+|.++++.|+..|.. ++.++|.+
T Consensus        37 ~L~~~~VlvvG~-GGlGs~va~~La~aGvg-~i~ivD~D   73 (434)
T 1tt5_B           37 LLDTCKVLVIGA-GGLGCELLKNLALSGFR-QIHVIDMD   73 (434)
T ss_dssp             HHHTCCEEEECS-STHHHHHHHHHHHTTCC-CEEEEECC
T ss_pred             HhcCCEEEEECc-CHHHHHHHHHHHHcCCC-EEEEEcCC
Confidence            357889999997 68999999999999986 68777654

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=94.78  E-value=0.18  Score=42.23  Aligned_cols=74  Identities=14%  Similarity=0.125  Sum_probs=51.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ..++++|+|+ |.+|..+++.+.+.|.+  +++++.++....  ....    .  ..+..|..|.+.+.+++++.     
T Consensus        18 ~~~~ili~g~-g~~g~~~~~a~~~~G~~--v~~v~~~~~~~~--~~~a----d--~~~~~~~~d~~~l~~~~~~~-----   81 (433)
T 2dwc_A           18 SAQKILLLGS-GELGKEIAIEAQRLGVE--VVAVDRYANAPA--MQVA----H--RSYVGNMMDKDFLWSVVERE-----   81 (433)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHHTTCE--EEEEESSTTCHH--HHHS----S--EEEESCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEECCCCChh--hhhc----c--eEEECCCCCHHHHHHHHHHc-----
Confidence            3468999987 57999999999999997  777776654311  1111    1  24556888887776665542     


Q ss_pred             CccEEEECcc
Q 028056          107 SLNLLINASG  116 (214)
Q Consensus       107 ~vd~lv~nag  116 (214)
                      .+|+++...+
T Consensus        82 ~~d~V~~~~e   91 (433)
T 2dwc_A           82 KPDAIIPEIE   91 (433)
T ss_dssp             CCSEEEECSS
T ss_pred             CCCEEEECcc
Confidence            7899887654

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=94.75  E-value=0.031  Score=45.80  Aligned_cols=38  Identities=24%  Similarity=0.342  Sum_probs=32.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      ..+++++|+|.|+ ||+|.++++.|+..|.. ++.++|.+
T Consensus        32 ~~L~~~~VlivG~-GGlG~~ia~~La~~Gvg-~itlvD~d   69 (346)
T 1y8q_A           32 KRLRASRVLLVGL-KGLGAEIAKNLILAGVK-GLTMLDHE   69 (346)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECCC
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCC-EEEEEECC
Confidence            4577899999986 69999999999999997 78887654

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=94.74  E-value=0.036  Score=43.82  Aligned_cols=36  Identities=17%  Similarity=0.208  Sum_probs=32.5

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      ++||.++|.|.++-+|+.+|+.|...|+.  |.++.+.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAt--Vtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYT--VSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCe--EEEEeCC
Confidence            89999999999999999999999999997  7776653

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=94.73  E-value=0.26  Score=40.55  Aligned_cols=74  Identities=11%  Similarity=0.137  Sum_probs=50.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ..++++|+|+ |.+|..+++.+.+.|.+  +++++.++....  ...    ..  ..+..|..|.+.+.+++++.     
T Consensus        10 ~~~~ili~g~-g~~~~~~~~a~~~~G~~--v~~~~~~~~~~~--~~~----~d--~~~~~~~~d~~~l~~~~~~~-----   73 (391)
T 1kjq_A           10 AATRVMLLGS-GELGKEVAIECQRLGVE--VIAVDRYADAPA--MHV----AH--RSHVINMLDGDALRRVVELE-----   73 (391)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCE--EEEEESSTTCGG--GGG----SS--EEEECCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCE--EEEEECCCCCch--hhh----cc--ceEECCCCCHHHHHHHHHHc-----
Confidence            4578999987 47899999999999997  777776654311  111    11  24556778877766665543     


Q ss_pred             CccEEEECcc
Q 028056          107 SLNLLINASG  116 (214)
Q Consensus       107 ~vd~lv~nag  116 (214)
                      .+|+++....
T Consensus        74 ~~d~v~~~~e   83 (391)
T 1kjq_A           74 KPHYIVPEIE   83 (391)
T ss_dssp             CCSEEEECSS
T ss_pred             CCCEEEECCC
Confidence            7899887544

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=94.70  E-value=0.039  Score=43.89  Aligned_cols=38  Identities=29%  Similarity=0.383  Sum_probs=33.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      .+++||.++|.|.++-+|+.++..|...|+.  |.++.+.
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt--Vtv~hs~  194 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKAT--VTTCHRF  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCe--EEEEeCC
Confidence            5689999999999999999999999999997  7666543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=94.63  E-value=0.14  Score=41.29  Aligned_cols=117  Identities=12%  Similarity=0.090  Sum_probs=64.6

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhc---CCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNR---FPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .+.|+|+ |.+|..++..++..|.-..|++.++++++++. ..++...   .+.+......|  +.+           .+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~-----------a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYG-----------PT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHH-----------Hh
Confidence            4788896 99999999999998862259999999876543 1122111   11122222122  112           23


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ..-|++|.++|...        .+-+  +.   ...++.|    .-+.+.+.+.+.+...+     ..+++++....
T Consensus        68 ~~aDvVii~ag~~~--------kpG~--~R---~dl~~~N----~~i~~~i~~~i~~~~p~-----a~vivvtNPvd  122 (314)
T 3nep_X           68 EDSDVCIITAGLPR--------SPGM--SR---DDLLAKN----TEIVGGVTEQFVEGSPD-----STIIVVANPLD  122 (314)
T ss_dssp             TTCSEEEECCCC-----------------C---HHHHHHH----HHHHHHHHHHHHTTCTT-----CEEEECCSSHH
T ss_pred             CCCCEEEECCCCCC--------CCCC--CH---HHHHHhh----HHHHHHHHHHHHHhCCC-----cEEEecCCchh
Confidence            47899999999753        1111  11   1123333    34455555565554332     37888887543

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=94.62  E-value=0.1  Score=41.19  Aligned_cols=86  Identities=13%  Similarity=0.120  Sum_probs=53.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCc--ccccc-------------hhhcCCCceeEEEecCCCHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGA--TGLLD-------------LKNRFPERLDVLQLDLTVES   92 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~--~~~~~-------------~~~~~~~~~~~~~~Dl~~~~   92 (214)
                      -+++|+|++|.+|+.+++.+.+. |.. .+.++++++...  +.+.+             .+.+.-..+. +..|++.++
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~e-lva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~D-vVIDft~p~   83 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQ-LGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPE   83 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEE-CCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHH
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCE-EEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCC-EEEEcCChH
Confidence            47999999999999999988754 554 233566655321  11100             0011001222 345899999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECcccc
Q 028056           93 TIEASAKSIKEKYGSLNLLINASGIL  118 (214)
Q Consensus        93 ~v~~~~~~~~~~~~~vd~lv~nag~~  118 (214)
                      ...+.+..+.+.  .+++++-..|..
T Consensus        84 ~~~~~~~~a~~~--G~~vVigTtG~~  107 (273)
T 1dih_A           84 GTLNHLAFCRQH--GKGMVIGTTGFD  107 (273)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCCC
T ss_pred             HHHHHHHHHHhC--CCCEEEECCCCC
Confidence            888888888775  577887777643

>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}

Probab=94.62  E-value=0.066  Score=44.41  Aligned_cols=76  Identities=14%  Similarity=0.055  Sum_probs=51.6

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++||+||-.|+++||=   +...++.|++ +|+.++.++ -++.+.+.....  ..++.+++.|+.+.+          
T Consensus        81 ~~~~k~VLDvG~GtGiL---s~~Aa~aGA~-~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~----------  145 (376)
T 4hc4_A           81 ALRGKTVLDVGAGTGIL---SIFCAQAGAR-RVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE----------  145 (376)
T ss_dssp             HHTTCEEEEETCTTSHH---HHHHHHTTCS-EEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC----------
T ss_pred             hcCCCEEEEeCCCccHH---HHHHHHhCCC-EEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec----------
Confidence            46899999999988864   3445678987 799998775 334344444433  457889999887642          


Q ss_pred             HHcCCccEEEECcc
Q 028056          103 EKYGSLNLLINASG  116 (214)
Q Consensus       103 ~~~~~vd~lv~nag  116 (214)
                       .-.++|++|...-
T Consensus       146 -lpe~~DvivsE~~  158 (376)
T 4hc4_A          146 -LPEQVDAIVSEWM  158 (376)
T ss_dssp             -CSSCEEEEECCCC
T ss_pred             -CCccccEEEeecc
Confidence             1136788887553

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=94.59  E-value=0.041  Score=43.75  Aligned_cols=38  Identities=32%  Similarity=0.243  Sum_probs=33.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      .+++||.++|.|.++-.|+.+|..|+..|+.  |.++.+.
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAt--Vtv~hs~  194 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCT--VTVTHRF  194 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCE--EEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCe--EEEEeCC
Confidence            5689999999999999999999999999997  7666543

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=94.57  E-value=0.25  Score=35.05  Aligned_cols=83  Identities=17%  Similarity=0.107  Sum_probs=50.6

Q ss_pred             CcEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecCC--CCccc--ccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           28 GGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNP--NGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        28 ~k~vlItG~s---~giG~~~a~~l~~~g~~~~vi~~~r~~--~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      -+++.|.|+|   +.+|..+++.|.+.|++  |...+.+.  +....  ....+.+....+..+..=+. .+.+.+++++
T Consensus        13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~--v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~~   89 (145)
T 2duw_A           13 TRTIALVGASDKPDRPSYRVMKYLLDQGYH--VIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQE   89 (145)
T ss_dssp             CCCEEEESCCSCTTSHHHHHHHHHHHHTCC--EEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHHH
T ss_pred             CCEEEEECcCCCCCChHHHHHHHHHHCCCE--EEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHHH
Confidence            4678999998   68999999999999997  77666654  22111  11222222333444433344 3677777777


Q ss_pred             HHHHcCCccEEEECc
Q 028056          101 IKEKYGSLNLLINAS  115 (214)
Q Consensus       101 ~~~~~~~vd~lv~na  115 (214)
                      +.+.  .+..++...
T Consensus        90 ~~~~--g~~~i~i~~  102 (145)
T 2duw_A           90 AIAI--GAKTLWLQL  102 (145)
T ss_dssp             HHHH--TCCEEECCT
T ss_pred             HHHc--CCCEEEEcC
Confidence            7664  344454444

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=94.56  E-value=0.46  Score=33.55  Aligned_cols=84  Identities=15%  Similarity=0.068  Sum_probs=50.3

Q ss_pred             CcEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecCCCCccc--ccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           28 GGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        28 ~k~vlItG~s---~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      -+++.|.|+|   +.+|..+++.|.+.|++  |+-.+...+....  ....+.+....+..+..=+ ..+.+.++++++.
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~v-p~~~~~~vv~~~~   98 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFV-KPKLTMEYVEQAI   98 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTCSEETTEECBSSGGGCSSCCSEEEECS-CHHHHHHHHHHHH
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCCCeECCeeccCCHHHcCCCCCEEEEEe-CHHHHHHHHHHHH
Confidence            5889999998   78999999999999996  6555433221110  1112222223333332222 3467778888877


Q ss_pred             HHcCCccEEEECcc
Q 028056          103 EKYGSLNLLINASG  116 (214)
Q Consensus       103 ~~~~~vd~lv~nag  116 (214)
                      +.  .+..++...|
T Consensus        99 ~~--gi~~i~~~~g  110 (144)
T 2d59_A           99 KK--GAKVVWFQYN  110 (144)
T ss_dssp             HH--TCSEEEECTT
T ss_pred             Hc--CCCEEEECCC
Confidence            65  3456666555

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=94.55  E-value=0.049  Score=46.19  Aligned_cols=39  Identities=21%  Similarity=0.162  Sum_probs=34.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      +++++|.++|.|. |+.|.++|+.|+++|++  |...++++.
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~--V~~~D~~~~   43 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAI--VTVNDGKPF   43 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCE--EEEEESSCG
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCE--EEEEeCCcc
Confidence            5678999999999 78999999999999997  988888664

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=94.52  E-value=0.14  Score=40.77  Aligned_cols=37  Identities=14%  Similarity=0.071  Sum_probs=32.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      ++|.|.|+ |.+|..+|..|++.|.+  |++.++++++++
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~--V~~~d~~~~~~~   52 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHT--VVLVDQTEDILA   52 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCe--EEEEECCHHHHH
Confidence            57889988 89999999999999987  999999876554

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=94.48  E-value=0.037  Score=45.16  Aligned_cols=40  Identities=20%  Similarity=0.183  Sum_probs=35.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      .++.|+++.|.|. |.||..+|+.+...|.+  |+..+|+++.
T Consensus       160 ~~l~g~~vgIIG~-G~iG~~vA~~l~~~G~~--V~~~dr~~~~  199 (333)
T 3ba1_A          160 TKFSGKRVGIIGL-GRIGLAVAERAEAFDCP--ISYFSRSKKP  199 (333)
T ss_dssp             CCCTTCCEEEECC-SHHHHHHHHHHHTTTCC--EEEECSSCCT
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEECCCchh
Confidence            5789999999975 89999999999999998  9999988765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	214
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-21
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	3e-20
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	5e-17
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	7e-17
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-16
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	6e-16
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	7e-16
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	8e-16
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-15
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-15
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-15
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	9e-15
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	1e-14
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-14
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	3e-14
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	3e-14
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-14
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-14
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	1e-13
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-13
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	2e-13
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-13
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-13
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-12
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-12
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-12
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	3e-12
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-11
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-11
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-11
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-11
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-11
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	7e-11
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	8e-11
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	8e-11
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	9e-11
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	9e-11
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-10
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-10
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-10
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-10
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-10
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-10
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	1e-09
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-09
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-09
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	4e-09
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	6e-09
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	7e-09
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	8e-09
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-08
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	4e-08
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	9e-08
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-06
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-06
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-06
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-06
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-06
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-05
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-05
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	3e-05
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	3e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	5e-04
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	6e-04
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	0.001
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	0.002

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 86.8 bits (214), Expect = 2e-21
 Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 21/193 (10%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           +V GA+RGIGL   +QL++  +   +IAT R+   AT   +LK+    R+ VL L +T +
Sbjct: 7   VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT---ELKSIKDSRVHVLPLTVTCD 63

Query: 92  STIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            +++     + E  GS  L+LLIN +G+      L    T  +  ++ +    +VN    
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGV------LLSYGTNTEPNRAVIAEQLDVNTTSV 117

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG---------WHSYRASKA 200
           +L+ + + PLLK   +    D   V+  +    S G   +             +YR SKA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177

Query: 201 ALNQ-CKILAMDF 212
           A+N   + LA+D 
Sbjct: 178 AINMFGRTLAVDL 190

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.4 bits (206), Expect = 3e-20
 Identities = 40/192 (20%), Positives = 75/192 (39%), Gaps = 17/192 (8%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLD 82
           +W+  ++LV GAS GIG   A+ L+++  K  V+   R       L        +P  L 
Sbjct: 7   RWRDRLALVTGASGGIGAAVARALVQQGLK--VVGCARTVGNIEELAAECKSAGYPGTLI 64

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
             + DL+ E  I +   +I+ ++  +++ IN +G+           TL     S     +
Sbjct: 65  PYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL-------ARPDTLLSGSTSGWKDMF 117

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            VN +   +  +     +K            + N+++  G      L   H Y A+K A+
Sbjct: 118 NVNVLALSICTREAYQSMKERNVDDGH----IININSMSGHRV-LPLSVTHFYSATKYAV 172

Query: 203 NQC-KILAMDFE 213
               + L  +  
Sbjct: 173 TALTEGLRQELR 184

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 75.0 bits (184), Expect = 5e-17
 Identities = 35/192 (18%), Positives = 74/192 (38%), Gaps = 18/192 (9%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL---LDLKNRFPERL 81
           ++   V+++ G+S GIG   A     +  K  V  T R+          +       + +
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAK--VTITGRHAERLEETRQQILAAGVSEQNV 59

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
           + +  D+T ++  +    +   K+G L++L+N +G     +  +  T  +     + +  
Sbjct: 60  NSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATL-- 117

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
             +N    I + K   P L      I    ++ + L A            +  Y  +KAA
Sbjct: 118 -NLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHAT---------PDFPYYSIAKAA 167

Query: 202 LNQ-CKILAMDF 212
           ++Q  +  A+D 
Sbjct: 168 IDQYTRNTAIDL 179

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (182), Expect = 7e-17
 Identities = 37/188 (19%), Positives = 68/188 (36%), Gaps = 21/188 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G + L+ GA  GIG   A +  +   K  ++    N +G             ++    +
Sbjct: 6   TGEIVLITGAGHGIGRLTAYEFAKLKSK--LVLWDINKHGLEETAAKCKGLGAKVHTFVV 63

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLIN-ASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           D +    I +SAK +K + G +++L+N A  + +       +  + K         +EVN
Sbjct: 64  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKT--------FEVN 115

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
            +      K   P +     G    +  VA+ +  V            +Y +SK A    
Sbjct: 116 VLAHFWTTKAFLPAMTKNNHGH---IVTVASAAGHVSV------PFLLAYCSSKFAAVGF 166

Query: 205 CKILAMDF 212
            K L  + 
Sbjct: 167 HKTLTDEL 174

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 72.6 bits (178), Expect = 3e-16
 Identities = 38/187 (20%), Positives = 64/187 (34%), Gaps = 25/187 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G   LV G +RGIG   A+    +     V      P G      +   F       Q+
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFAREGAL--VALCDLRPEGKEVAEAIGGAF------FQV 55

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           DL  E       +      G +++L+N + I +  + L     L +  +       EVN 
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSAL--TVRLPEWRR-----VLEVNL 108

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-C 205
             P+ +    +  ++  G      +  VA++                +Y ASK  L    
Sbjct: 109 TAPMHLSALAAREMRKVGG---GAIVNVASVQGLFAEQ------ENAAYNASKGGLVNLT 159

Query: 206 KILAMDF 212
           + LA+D 
Sbjct: 160 RSLALDL 166

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 72.4 bits (177), Expect = 6e-16
 Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 18/187 (9%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG   L+ G + G+G     + + +  K  V    ++   A  L +L+    + +  +  
Sbjct: 4   KGEAVLITGGASGLGRALVDRFVAEGAK--VAVLDKS---AERLAELETDHGDNVLGIVG 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+      + +A     ++G ++ LI  +GI      L      +       +    +N 
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVF--HINV 116

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-C 205
            G I  +K   P L      +        + +    +      GG   Y A+K A+    
Sbjct: 117 KGYIHAVKACLPALVASRGNV----IFTISNAGFYPN------GGGPLYTAAKHAIVGLV 166

Query: 206 KILAMDF 212
           + LA + 
Sbjct: 167 RELAFEL 173

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 72.0 bits (176), Expect = 7e-16
 Identities = 37/192 (19%), Positives = 74/192 (38%), Gaps = 20/192 (10%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL---KNRFPERL 81
           ++ G   ++ G+S GIG   A    ++  +  V  T RN +                E++
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQ--VTITGRNEDRLEETKQQILKAGVPAEKI 58

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
           + +  D+T  S  +    +   K+G +++L+N +G          +  +   +K      
Sbjct: 59  NAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQK-----T 113

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
           +++N    I + +     L      I    ++VA         G     G+  Y  +KAA
Sbjct: 114 FKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVA---------GPQAHSGYPYYACAKAA 164

Query: 202 LNQ-CKILAMDF 212
           L+Q  +  A+D 
Sbjct: 165 LDQYTRCTAIDL 176

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 71.6 bits (175), Expect = 8e-16
 Identities = 35/189 (18%), Positives = 68/189 (35%), Gaps = 26/189 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQ 85
                +   A  GIGL+ +++L+++N K             T L +LK   P+  +    
Sbjct: 4   TNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 86  LDLTV-ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
            D+TV  +  +   K I ++  ++++LIN +GI         +  + +           +
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGI-------LDDHQIERT--------IAI 106

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N  G +     +         G    +A + +++                Y ASKAA+  
Sbjct: 107 NFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI------HQVPVYSASKAAVVS 160

Query: 205 -CKILAMDF 212
               LA   
Sbjct: 161 FTNSLAKLA 169

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 1e-15
 Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 19/176 (10%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+LV G ++GIGL   + L      G V+ T R+       +             QLD+ 
Sbjct: 5   VALVTGGNKGIGLAIVRDLCRLFS-GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
              +I A    ++++YG L++L+N +GI         +            +  + N  G 
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGI-------AFKVADPTPFHIQAEVTMKTNFFGT 116

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQC 205
             V   + PL+K  G  +  +V+ + ++ A         L         K      
Sbjct: 117 RDVCTELLPLIKPQGRVV--NVSSIMSVRA---------LKSCSPELQQKFRSETI 161

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 70.5 bits (172), Expect = 2e-15
 Identities = 35/189 (18%), Positives = 72/189 (38%), Gaps = 17/189 (8%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           + +  V+++ G + GIG   AK  +    K  V+      +    + +     P+ +  +
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAK--VVIADIADDHGQKVCNNIGS-PDVISFV 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             D+T +  +     +   K+G L+++    G+LS       E      ++       ++
Sbjct: 60  HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKR-----VMDI 114

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N  G  LV KH + ++     G     A +++ +A  G          H Y A+K A+  
Sbjct: 115 NVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV--------SHVYTATKHAVLG 166

Query: 205 -CKILAMDF 212
               L  + 
Sbjct: 167 LTTSLCTEL 175

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 70.0 bits (171), Expect = 3e-15
 Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 19/192 (9%)

Query: 23  SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLD 82
           S +  G V+++ G + GIGL  A + +E+  K  V+ T R+ +            P+++ 
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAK--VMITGRHSDVGEKAAKSVGT-PDQIQ 57

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAY 142
             Q D + E        + ++ +G ++ L+N +GI           ++ +   +      
Sbjct: 58  FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI-------AVNKSVEETTTAEWRKLL 110

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
            VN  G     +     +K  G G    +  ++++   VG           +Y ASK A+
Sbjct: 111 AVNLDGVFFGTRLGIQRMKNKGLG--ASIINMSSIEGFVGDP------SLGAYNASKGAV 162

Query: 203 NQ-CKILAMDFE 213
               K  A+D  
Sbjct: 163 RIMSKSAALDCA 174

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 68.5 bits (167), Expect = 9e-15
 Identities = 41/187 (21%), Positives = 71/187 (37%), Gaps = 22/187 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G   ++ G +RG+G E A+Q +    +  V+                    +      L
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGAR--VVLADVLDE---EGAATARELGDAARYQHL 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+T+E   +      +E++GS++ L+N +GI            L            E+N 
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGI-------STGMFLETESVERFRKVVEINL 111

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-C 205
            G  + +K + P +K  G G     ++V   SA     G   L    SY ASK  +    
Sbjct: 112 TGVFIGMKTVIPAMKDAGGG-----SIVNISSA----AGLMGLALTSSYGASKWGVRGLS 162

Query: 206 KILAMDF 212
           K+ A++ 
Sbjct: 163 KLAAVEL 169

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 68.4 bits (167), Expect = 1e-14
 Identities = 34/186 (18%), Positives = 69/186 (37%), Gaps = 19/186 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K  ++++ G + GIG   A++   +     +      P  A            R+  ++ 
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGAD--IAIADLVP--APEAEAAIRNLGRRVLTVKC 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D++    +EA  K +   +G  ++L+N +GI        P    +++        +E+N 
Sbjct: 60  DVSQPGDVEAFGKQVISTFGRCDILVNNAGI-------YPLIPFDELTFEQWKKTFEINV 112

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCK 206
               L+ K   P +K  G G         NL++    +       + S +A+       +
Sbjct: 113 DSGFLMAKAFVPGMKRNGWGRI------INLTSTTYWLKIEAYTHYISTKAANIGF--TR 164

Query: 207 ILAMDF 212
            LA D 
Sbjct: 165 ALASDL 170

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 68.1 bits (166), Expect = 2e-14
 Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 25/195 (12%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN------GATGLLDLKNRFP 78
           ++ G V LV GA  G+G  +A    E+     V+      +      G++    +     
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGAL--VVVNDLGGDFKGVGKGSSAADKVVEEIR 61

Query: 79  ERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSL 138
            R      +       E   K+  + +G +++++N +GIL        + + +++     
Sbjct: 62  RRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGIL-------RDRSFSRISDEDW 114

Query: 139 MLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRAS 198
            +   V+  G   V +     +K    G       +   ++  G  G+    G  +Y A+
Sbjct: 115 DIIQRVHLRGSFQVTRAAWDHMKKQNYG------RIIMTASASGIYGNF---GQANYSAA 165

Query: 199 KAALNQC-KILAMDF 212
           K  L      L ++ 
Sbjct: 166 KLGLLGLANTLVIEG 180

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 67.3 bits (164), Expect = 3e-14
 Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 23/190 (12%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           + +G V+LV G + G+GLE  K LL +  K  V  +  N         L     ER   +
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAK--VAFSDINEAAGQ---QLAAELGERSMFV 57

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           + D++ E+       +++ + G+LN+L+N +GI            +            ++
Sbjct: 58  RHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGI-------LLPGDMETGRLEDFSRLLKI 110

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N     +  +     +K  G  I      +A++S+ +          +  Y ASKAA++ 
Sbjct: 111 NTESVFIGCQQGIAAMKETGGSI----INMASVSSWLPIE------QYAGYSASKAAVSA 160

Query: 205 -CKILAMDFE 213
             +  A+   
Sbjct: 161 LTRAAALSCR 170

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 67.7 bits (165), Expect = 3e-14
 Identities = 35/194 (18%), Positives = 75/194 (38%), Gaps = 22/194 (11%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL---KNRFPERL 81
           ++     ++ G+S GIG   A    ++     V  T R+         +        +++
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGAN--VTITGRSSERLEETRQIILKSGVSEKQV 59

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQP--ETTLNKVEKSSLM 139
           + +  D+T E   +    S  +++G +++L+N +G            +  ++   K+   
Sbjct: 60  NSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKT--- 116

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
              ++N    I + K + P L      I    ++VA   A+           +  Y  +K
Sbjct: 117 --LKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ---------PDFLYYAIAK 165

Query: 200 AALNQ-CKILAMDF 212
           AAL+Q  +  A+D 
Sbjct: 166 AALDQYTRSTAIDL 179

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 67.0 bits (163), Expect = 4e-14
 Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 14/189 (7%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
                +V G +RGIGL F + +        V    R+   A  + + +   F  +    Q
Sbjct: 8   VNKTIIVTGGNRGIGLAFTRAVAAAGAN--VAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D++    +  + + I    G ++ LI  +G+              ++        Y+VN
Sbjct: 66  CDVSNTDIVTKTIQQIDADLGPISGLIANAGV-------SVVKPATELTHEDFAFVYDVN 118

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALNQ 204
             G     + ++ L           + V +++S+++ +    N       Y +SKAA + 
Sbjct: 119 VFGVFNTCRAVAKLWLQKQQK--GSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSN 176

Query: 205 -CKILAMDF 212
             K LA ++
Sbjct: 177 LVKGLAAEW 185

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 9e-14
 Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 22/188 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLDVL 84
            G V+LV GA++GIG  FA+ LL K  K  V     N            +   P++   +
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALHEQFEPQKTLFI 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           Q D+  +  +  + + + + +G L++L+N +G+ +  N                    ++
Sbjct: 60  QCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN---------------WEKTLQI 104

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N V  I         +     G    +  +++L+  +          + + +       +
Sbjct: 105 NLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ---QPVYCASKHGIVGFTR 161

Query: 205 CKILAMDF 212
              LA + 
Sbjct: 162 SAALAANL 169

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 65.9 bits (159), Expect = 1e-13
 Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 15/181 (8%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV 90
           L+ G +RG+GL   K LL        +  TCRN   A  L DL       + +L++DL  
Sbjct: 6   LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHS-NIHILEIDLRN 64

Query: 91  ESTIEA--SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVG 148
               +   +      K   LN+L N         +      +  V    L+   + N V 
Sbjct: 65  FDAYDKLVADIEGVTKDQGLNVLFNN------AGIAPKSARITAVRSQELLDTLQTNTVV 118

Query: 149 PILVIKHMSPLLKVGGTG-----IERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALN 203
           PI++ K   PLLK          +    A + N+S+ +GSI  N  GG ++YR SK+ALN
Sbjct: 119 PIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALN 178

Query: 204 Q 204
            
Sbjct: 179 A 179

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 65.4 bits (159), Expect = 1e-13
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
           +G V+LV G SRG+G   A+ L E      V+   RN   A+     L  ++       +
Sbjct: 4   RGRVALVTGGSRGLGFGIAQGLAEAGCS--VVVASRNLEEASEAAQKLTEKYGVETMAFR 61

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D++    ++   +++KEK+G L+ ++NA+GI
Sbjct: 62  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI 93

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 64.8 bits (157), Expect = 2e-13
 Identities = 27/189 (14%), Positives = 59/189 (31%), Gaps = 22/189 (11%)

Query: 30  VSLVQGASRGIGLEFAKQLLEK-----NDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           + L+ GA +GIG   A +         + +  ++ + R       +           D +
Sbjct: 3   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 62

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             D++  + +      I E+YG ++ L+N +G+     +                     
Sbjct: 63  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYT-------MNT 115

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N  G   + + +  L++   +G    +  VA   A               Y  SK     
Sbjct: 116 NLKGTFFLTQALFALMERQHSGHIFFITSVAATKA---------FRHSSIYCMSKFGQRG 166

Query: 205 -CKILAMDF 212
             + + +  
Sbjct: 167 LVETMRLYA 175

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 64.6 bits (157), Expect = 2e-13
 Identities = 39/188 (20%), Positives = 66/188 (35%), Gaps = 20/188 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G  +LV G SRGIG    ++L        V    RN       L        +++    
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGAS--VYTCSRNQKELNDCLTQWRSKGFKVEASVC 64

Query: 87  DLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           DL+  S  +    ++   + G LN+L+N +GI                      L   +N
Sbjct: 65  DLSSRSERQELMNTVANHFHGKLNILVNNAGI-------VIYKEAKDYTVEDYSLIMSIN 117

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
                 +     P LK    G    ++ V+         G   +     Y A+K A++Q 
Sbjct: 118 FEAAYHLSVLAHPFLKASERGNVVFISSVS---------GALAVPYEAVYGATKGAMDQL 168

Query: 205 CKILAMDF 212
            + LA ++
Sbjct: 169 TRCLAFEW 176

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.6 bits (157), Expect = 3e-13
 Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 23/189 (12%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           ++ G V +V G  RGIG    +  +    +  V+   ++ +G      L+   P  +  +
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGAR--VVICDKDESGGR---ALEQELPGAV-FI 56

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             D+T E  ++        ++G L+ ++N +G    P   + ET+     +       E+
Sbjct: 57  LCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPE-ETSAQGFRQ-----LLEL 110

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           N +G   + K   P L+     +        N+S+ VG+IG         Y A+K A+  
Sbjct: 111 NLLGTYTLTKLALPYLRKSQGNV-------INISSLVGAIGQA---QAVPYVATKGAVTA 160

Query: 205 -CKILAMDF 212
             K LA+D 
Sbjct: 161 MTKALALDE 169

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 62.4 bits (151), Expect = 1e-12
 Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G  +++ GA  GIG E A           V+ +  N + A  ++D   +   +    + 
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGAS--VVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           D+T E  + A A     K G +++L+N +G 
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGG 98

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 2e-12
 Identities = 37/188 (19%), Positives = 68/188 (36%), Gaps = 21/188 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
           +G   +V GAS+GIG E A  L +      V+ T R+      ++             + 
Sbjct: 13  QGKKVIVTGASKGIGREMAYHLAKMGAH--VVVTARSKETLQKVVSHCLELGAASAHYIA 70

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
             +   +  E       +  G L++LI                 L   +   +  + EVN
Sbjct: 71  GTMEDMTFAEQFVAQAGKLMGGLDMLILNHIT-------NTSLNLFHDDIHHVRKSMEVN 123

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
            +  +++     P+LK     I     VV++L+ +V            +Y ASK AL+  
Sbjct: 124 FLSYVVLTVAALPMLKQSNGSIV----VVSSLAGKVAY------PMVAAYSASKFALDGF 173

Query: 205 CKILAMDF 212
              +  ++
Sbjct: 174 FSSIRKEY 181

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 62.3 bits (151), Expect = 2e-12
 Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 20/188 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K    LV G ++GIG    ++         +    RN       L    +   ++     
Sbjct: 7   KAKTVLVTGGTKGIGHAIVEEFAGFGAV--IHTCARNEYELNECLSKWQKKGFQVTGSVC 64

Query: 87  DLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           D ++    E   +++   + G L++LIN  G +     L  + T               N
Sbjct: 65  DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTL--DYTAEDFSF-----HISTN 117

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
                 + +   PLLK  G G    ++ +A + +               Y A+K ALNQ 
Sbjct: 118 LESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS---------VGSIYSATKGALNQL 168

Query: 205 CKILAMDF 212
            + LA ++
Sbjct: 169 ARNLACEW 176

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 61.7 bits (149), Expect = 3e-12
 Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 19/187 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V+L  GA RGIG   A +L  +     V+    +   A  ++    +   +   +Q 
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGAS-VVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D++  S + A        +G L+ +++ SG+    + L  E T    +K      + +N 
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDEL--EVTQELFDK-----VFNLNT 116

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-C 205
            G   V +      + GG  I          +   G      +     Y  SKAA+   C
Sbjct: 117 RGQFFVAQQGLKHCRRGGRIILTSSIA----AVMTG------IPNHALYAGSKAAVEGFC 166

Query: 206 KILAMDF 212
           +  A+D 
Sbjct: 167 RAFAVDC 173

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 2e-11
 Identities = 38/192 (19%), Positives = 65/192 (33%), Gaps = 25/192 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-----LKNRFPERL 81
           +G V++V G + GIG    K+LLE      V+   R         D     L      R+
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSN--VVIASRKLERLKSAADELQANLPPTKQARV 68

Query: 82  DVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA 141
             +Q ++  E  +    KS  + +G +N L+N  G        Q  +    +        
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG-------QFLSPAEHISSKGWHAV 121

Query: 142 YEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAA 201
            E N  G   + K +         G      V   +  + G              A++A 
Sbjct: 122 LETNLTGTFYMCKAVYSSWMKEHGGSI----VNIIVPTKAGF------PLAVHSGAARAG 171

Query: 202 LNQ-CKILAMDF 212
           +    K LA+++
Sbjct: 172 VYNLTKSLALEW 183

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (143), Expect = 2e-11
 Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 26/187 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G   LV GA +GIG    + L     +  V+A  R       L+         ++ + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGAR--VVAVSRTQADLDSLVREC----PGIEPVCV 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           DL      E          G ++LL+N + +              +V K +   ++EVN 
Sbjct: 60  DLGDWEATER----ALGSVGPVDLLVNNAAV-------ALLQPFLEVTKEAFDRSFEVNL 108

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-C 205
              I V + ++  L   G         + N+S++        +     Y ++K AL+   
Sbjct: 109 RAVIQVSQIVARGLIARGVPG-----AIVNVSSQCSQR---AVTNHSVYCSTKGALDMLT 160

Query: 206 KILAMDF 212
           K++A++ 
Sbjct: 161 KVMALEL 167

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 59.4 bits (143), Expect = 2e-11
 Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 21/188 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN-PNGATGLLDLKNRFPERLDVLQ 85
           +G V+LV GA RGIG E A +L  +  K  VI    N    A  ++    +       ++
Sbjct: 17  EGKVALVTGAGRGIGREMAMELGRRGCK--VIVNYANSTESAEEVVAAIKKNGSDAACVK 74

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            ++ V   I    +   + +G L+++ + SG+            +  V        + +N
Sbjct: 75  ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-------VSFGHVKDVTPEEFDRVFTIN 127

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
             G   V +     L++GG  I         + +  G          +S   SK A+   
Sbjct: 128 TRGQFFVAREAYKHLEIGGRLI--------LMGSITGQAKAVPKHAVYS--GSKGAIETF 177

Query: 205 CKILAMDF 212
            + +A+D 
Sbjct: 178 ARCMAIDM 185

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 58.6 bits (141), Expect = 4e-11
 Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 4/94 (4%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD--LKNRFPERLD 82
           ++   V L+ G   G+G   A +L  +  K  +     +  G        L+      + 
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAK--LSLVDVSSEGLEASKAAVLETAPDAEVL 58

Query: 83  VLQLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
               D++ E+ +EA   +  E++G ++   N +G
Sbjct: 59  TTVADVSDEAQVEAYVTATTERFGRIDGFFNNAG 92

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 58.2 bits (140), Expect = 5e-11
 Identities = 41/188 (21%), Positives = 71/188 (37%), Gaps = 20/188 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG  +LV G S+GIG    ++L     +  V    RN       L++       ++    
Sbjct: 5   KGTTALVTGGSKGIGYAIVEELAGLGAR--VYTCSRNEKELDECLEIWREKGLNVEGSVC 62

Query: 87  DLTVESTIEASAKSIKEKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           DL   +  +   +++   + G LN+L+N +G+                 +    +    N
Sbjct: 63  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGV-------VIHKEAKDFTEKDYNIIMGTN 115

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
                 + +   PLLK    G    ++ +A         G + L     Y ASK A+NQ 
Sbjct: 116 FEAAYHLSQIAYPLLKASQNGNVIFLSSIA---------GFSALPSVSLYSASKGAINQM 166

Query: 205 CKILAMDF 212
            K LA ++
Sbjct: 167 TKSLACEW 174

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 57.9 bits (139), Expect = 7e-11
 Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+LV GA +GIG   A +L++      V     N   A  +    N+       +++D++
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFA--VAIADYNDATAKAVASEINQAGGHAVAVKVDVS 60

Query: 90  VESTIEASAKSIKEKYGSLNLLINASG 116
               + A+ +  ++  G  ++++N +G
Sbjct: 61  DRDQVFAAVEQARKTLGGFDVIVNNAG 87

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 57.4 bits (138), Expect = 8e-11
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)

Query: 28  GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD 87
             V+LV GA+ GIGLE A++L ++  +  V    R   G    L          D    D
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVEADGRTCD 59

Query: 88  LTVESTIEASAKSIKEKYGSLNLLINASG 116
           +     IEA   ++ E+YG +++L+N +G
Sbjct: 60  VRSVPEIEALVAAVVERYGPVDVLVNNAG 88

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 57.3 bits (138), Expect = 8e-11
 Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 14/125 (11%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           +V       G+  A +L E      V     +      L      +P      QL    E
Sbjct: 4   IVTNVKHFGGMGSALRLSEAGHT--VACHDESFKQKDELEAFAETYP------QLKPMSE 55

Query: 92  STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPIL 151
                  +++   YG +++L++                ++K        A E   + P  
Sbjct: 56  QEPAELIEAVTSAYGQVDVLVSNDIF------APEFQPIDKYAVEDYRGAVEALQIRPFA 109

Query: 152 VIKHM 156
           ++  +
Sbjct: 110 LVNAV 114

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 57.4 bits (138), Expect = 9e-11
 Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G V+LV G +RG+G    + ++ +  K  V+              +     +    + L
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAK--VVFGDILDEEGK---AMAAELADAARYVHL 59

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGI 117
           D+T  +  +A+  +    +G L++L+N +GI
Sbjct: 60  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGI 90

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 57.4 bits (138), Expect = 9e-11
 Identities = 23/92 (25%), Positives = 49/92 (53%), Gaps = 3/92 (3%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP-NGATGLLDLKNRFPERLDVLQ 85
           +G V ++ G+S G+G   A +   +  K  V+   R+  + A  +L+   +       ++
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAK--VVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
            D+TVES +    +S  +++G L+++IN +G+
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGL 95

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 57.1 bits (137), Expect = 1e-10
 Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 22/187 (11%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +G ++LV GASRGIG   A+ L  +  K  VI T  + NGA     + +        L L
Sbjct: 3   EGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQ---AISDYLGANGKGLML 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           ++T  ++IE+  + I+ ++G +++L+N +GI     +++ +               E N 
Sbjct: 58  NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEW-------NDIIETNL 110

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-C 205
                + K +   +     G       +  + + VG++G+   GG  +Y A+KA L    
Sbjct: 111 SSVFRLSKAVMRAMMKKRHG------RIITIGSVVGTMGN---GGQANYAAAKAGLIGFS 161

Query: 206 KILAMDF 212
           K LA + 
Sbjct: 162 KSLAREV 168

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 56.6 bits (136), Expect = 2e-10
 Identities = 34/187 (18%), Positives = 63/187 (33%), Gaps = 25/187 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           K    L+ GA+ GIG    +   ++  +  ++A            +     P     + +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGAR--LVACDIEEGPLREAAEAVGAHP-----VVM 56

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           D+   +++E          G L+ +++ +GI         +    K+      L   VN 
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGI-------TRDNFHWKMPLEDWELVLRVNL 109

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-C 205
            G  LV K  S  ++    G     A    L             G  +Y AS A +    
Sbjct: 110 TGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL----------GQANYAASMAGVVGLT 159

Query: 206 KILAMDF 212
           + LA++ 
Sbjct: 160 RTLALEL 166

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.3 bits (135), Expect = 2e-10
 Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 3/143 (2%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD--LKNRFPERLDV 83
              V ++ GASRG G   A QL      G  ++ + R+ +    L +     +   ++ +
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 84  LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYE 143
              DL  E+ ++    +++E      L        +       +  LN  + + +   + 
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124

Query: 144 VNAVGPILVIKHMSPLLKVGGTG 166
           +N    + +        +     
Sbjct: 125 LNLTSMLCLTSGTLNAFQDSPGL 147

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 56.6 bits (136), Expect = 2e-10
 Identities = 39/184 (21%), Positives = 67/184 (36%), Gaps = 19/184 (10%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V+LV GA RGIG E AK L +      VI   R       ++D    F         D++
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSH--VICISRTQKSCDSVVDEIKSFGYESSGYAGDVS 69

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            +  I      I  ++ +++       IL     +  +    +++          N    
Sbjct: 70  KKEEISEVINKILTEHKNVD-------ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSL 122

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-CKIL 208
             + + +S  +     G       + N+S+ VG  G     G  +Y +SKA +    K L
Sbjct: 123 FYITQPISKRMINNRYG------RIINISSIVGLTG---NVGQANYSSSKAGVIGFTKSL 173

Query: 209 AMDF 212
           A + 
Sbjct: 174 AKEL 177

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 56.4 bits (135), Expect = 2e-10
 Identities = 41/194 (21%), Positives = 81/194 (41%), Gaps = 17/194 (8%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL--DLKNRFPERLDVLQLD 87
            +++ G +R IG   A +L ++  +  V+   R+  GA   L  +L         + + D
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFR--VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGD 60

Query: 88  LTVESTIEASAKSI----KEKYGSLNLLINASGILSIPNVLQPETT----LNKVEKSSLM 139
           L++ S++    + I       +G  ++L+N +       +L  + T      K   + + 
Sbjct: 61  LSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVA 120

Query: 140 LAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASK 199
             +  NAV P+ +I+  +     GG    R+++VV    A      D  L G+  Y  +K
Sbjct: 121 ELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT----DLPLPGFCVYTMAK 176

Query: 200 AALNQ-CKILAMDF 212
            AL    +  A++ 
Sbjct: 177 HALGGLTRAAALEL 190

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 55.1 bits (132), Expect = 6e-10
 Identities = 38/184 (20%), Positives = 79/184 (42%), Gaps = 18/184 (9%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           V +V GASRGIG   A  L +   K  ++   R+   A  +      +  +      D++
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCK-VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            E+ +EA  K+  + +G++++++N +GI     +++ + +             ++N  G 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKS-------QWDEVIDLNLTGV 114

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKI-L 208
            L  +  + ++     G       + N+++ VG IG     G  +Y A+KA +       
Sbjct: 115 FLCTQAATKIMMKKRKG------RIINIASVVGLIG---NIGQANYAAAKAGVIGFSKTA 165

Query: 209 AMDF 212
           A + 
Sbjct: 166 AREG 169

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 1e-09
 Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 19/188 (10%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD-LKNRFPERLDVLQ 85
           +G V+ + G   G+G      L     +   +   R  +      + + ++   ++  +Q
Sbjct: 24  QGKVAFITGGGTGLGKGMTTLLSSLGAQ--CVIASRKMDVLKATAEQISSQTGNKVHAIQ 81

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
            D+     ++ +   + +  G  N++IN     +  N + P   L+     ++       
Sbjct: 82  CDVRDPDMVQNTVSELIKVAGHPNIVINN----AAGNFISPTERLSPNAWKTITDIVLNG 137

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
                L I       + G   +      +  + A  GS             ++KA +   
Sbjct: 138 TAFVTLEIGKQLIKAQKGAAFL-----SITTIYAETGSG------FVVPSASAKAGVEAM 186

Query: 205 CKILAMDF 212
            K LA ++
Sbjct: 187 SKSLAAEW 194

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 53.2 bits (127), Expect = 3e-09
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G   LV GA+ GIG         +     ++A  R       L +           +  
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGAS--LVAVDREER---LLAEAVAALEAEAIAVVA 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASG 116
           D++    +EA      E++G L+ + + +G
Sbjct: 59  DVSDPKAVEAVFAEALEEFGRLHGVAHFAG 88

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 52.9 bits (126), Expect = 3e-09
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 4/89 (4%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL--DLKNRFPERLDVL 84
           KG V++V G++ GIGL  A  L  +     ++            +   L  +   ++   
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGAD--IVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLIN 113
             DL+    +     +   + G +++L+N
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVN 89

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 52.9 bits (126), Expect = 4e-09
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           K+ G V LV GA   IGL  A +L E+     +     N                     
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTA--IALLDMNREALEKAEASVREKGVEARSY 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLN 109
             D+T E  +  +  S+   +G ++
Sbjct: 60  VCDVTSEEAVIGTVDSVVRDFGKID 84

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 52.2 bits (124), Expect = 6e-09
 Identities = 38/189 (20%), Positives = 71/189 (37%), Gaps = 20/189 (10%)

Query: 27  KGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
            G  +LV G +  R +G   A +L E    G  +A            +          + 
Sbjct: 7   SGKKALVMGVTNQRSLGFAIAAKLKE---AGAEVALSYQAERLRPEAEKLAEALGGALLF 63

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
           + D+T +  ++A    +KE +G L+ L++    ++       E       +   +LA EV
Sbjct: 64  RADVTQDEELDALFAGVKEAFGGLDYLVH---AIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           +A   + V +   PLL+ GG  +         L+          +  ++    +KAAL  
Sbjct: 121 SAYSLVAVARRAEPLLREGGGIV--------TLTYYASEKV---VPKYNVMAIAKAALEA 169

Query: 205 -CKILAMDF 212
             + LA + 
Sbjct: 170 SVRYLAYEL 178

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 52.1 bits (124), Expect = 7e-09
 Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 5/87 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G  +L+ G++RGIG  FA+  + +  +  V     N   A                + L
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGAR--VAIADINLEAAR---ATAAEIGPAACAIAL 58

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLIN 113
           D+T +++I+     + +++GS+++L+N
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVN 85

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.5 bits (123), Expect = 8e-09
 Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 26/187 (13%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
            G  +LV GA +GIG +  K L     K  V+A  R     + L+ L    P  ++ + +
Sbjct: 4   SGLRALVTGAGKGIGRDTVKALHASGAK--VVAVTRT---NSDLVSLAKECP-GIEPVCV 57

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           DL      E          G ++LL+N + +              +V K +   ++ VN 
Sbjct: 58  DLGDWDATEK----ALGGIGPVDLLVNNAAL-------VIMQPFLEVTKEAFDRSFSVNL 106

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-C 205
                V + ++                + N+S+ V  +         +Y ++K A+    
Sbjct: 107 RSVFQVSQMVAR-----DMINRGVPGSIVNVSSMVAHVT---FPNLITYSSTKGAMTMLT 158

Query: 206 KILAMDF 212
           K +AM+ 
Sbjct: 159 KAMAMEL 165

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 49.8 bits (118), Expect = 3e-08
 Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 22/184 (11%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
            +LV G + G+G   A  L  +  +  V+       G            E L  ++ D+T
Sbjct: 3   SALVTGGASGLGRAAALALKARGYR--VVVLDLRREG------------EDLIYVEGDVT 48

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
            E  +  +    +E+     ++  A   L+   + +      +  +  L    EVN +G 
Sbjct: 49  REEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVL----EVNLLGT 104

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-CKIL 208
             V++  +  ++      E    V+ N ++     G     G  +Y ASK  +       
Sbjct: 105 FNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG---QIGQAAYAASKGGVVALTLPA 161

Query: 209 AMDF 212
           A + 
Sbjct: 162 AREL 165

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (118), Expect = 4e-08
 Identities = 45/188 (23%), Positives = 74/188 (39%), Gaps = 23/188 (12%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKG-CVIATCRNPNGATGLLDLKNRF---PERLDVLQ 85
           V L+ G S GIGL  A +L     +   V AT R+      L +        P  L+ LQ
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 86  LDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVN 145
           LD+    ++ A+ + + E             +L     L     L  + + ++    +VN
Sbjct: 64  LDVRDSKSVAAARERVTEGR---------VDVLVCNAGLGLLGPLEALGEDAVASVLDVN 114

Query: 146 AVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ- 204
            VG + +++   P +K  G+G      V  ++   +G            Y ASK AL   
Sbjct: 115 VVGTVRMLQAFLPDMKRRGSGRVL---VTGSVGGLMGL------PFNDVYCASKFALEGL 165

Query: 205 CKILAMDF 212
           C+ LA+  
Sbjct: 166 CESLAVLL 173

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 48.6 bits (115), Expect = 9e-08
 Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 13/87 (14%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
                LV G +RGIGL  A++L     K  V  T R               P+ L  +++
Sbjct: 6   VSRSVLVTGGNRGIGLAIAQRLAADGHK--VAVTHRGSGA-----------PKGLFGVEV 52

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLIN 113
           D+T    ++ +  +++E  G + +L++
Sbjct: 53  DVTDSDAVDRAFTAVEEHQGPVEVLVS 79

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 45.7 bits (107), Expect = 1e-06
 Identities = 33/183 (18%), Positives = 57/183 (31%), Gaps = 27/183 (14%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT 89
           + ++ G + GIG    K L     +  ++        A  + DL                
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQ--IVGIDIRD--AEVIADLSTA------------- 45

Query: 90  VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLA-------Y 142
            E   +A A  + +    ++ L+  +G+     VL    ++N    + LM A        
Sbjct: 46  -EGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKG 104

Query: 143 EVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAAL 202
              A   I  +             +  +    A   A V   G+   GG  +Y  SK AL
Sbjct: 105 HQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ--GGNLAYAGSKNAL 162

Query: 203 NQC 205
              
Sbjct: 163 TVA 165

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 2e-06
 Identities = 41/192 (21%), Positives = 69/192 (35%), Gaps = 33/192 (17%)

Query: 25  KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           +  G V ++  A++GIG   A     +  K  VIAT  N +    L          LDV 
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAK--VIATDINESKLQELEKYPGIQTRVLDV- 59

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
                   T +        +   L++L N +G            T+   E+     +  +
Sbjct: 60  --------TKKKQIDQFANEVERLDVLFNVAGF-------VHHGTVLDCEEKDWDFSMNL 104

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHS---YRASKAA 201
           N     L+IK   P +    +G   +++ VA           + + G  +   Y  +KAA
Sbjct: 105 NVRSMYLMIKAFLPKMLAQKSGNIINMSSVA-----------SSVKGVVNRCVYSTTKAA 153

Query: 202 LNQ-CKILAMDF 212
           +    K +A DF
Sbjct: 154 VIGLTKSVAADF 165

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 2e-06
 Identities = 29/187 (15%), Positives = 57/187 (30%), Gaps = 10/187 (5%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           KG V+++ G + G+GL  A++L+ +      +      +G                    
Sbjct: 4   KGLVAVITGGASGLGLATAERLVGQGAS--AVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
                 T  A AK    +             +++ +                    +VN 
Sbjct: 62  SEKDVQTALALAKGKFGRVDV----AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 117

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-C 205
           +G   VI+ ++  +            V+ N ++     G     G  +Y ASK  +    
Sbjct: 118 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG---QVGQAAYSASKGGIVGMT 174

Query: 206 KILAMDF 212
             +A D 
Sbjct: 175 LPIARDL 181

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 43.9 bits (103), Expect = 4e-06
 Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 34/187 (18%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +    LV  ASRGIG   A  L ++  +  V    RN        +L  R   R  V   
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQEGAE--VTICARNE-------ELLKRSGHRYVV--C 51

Query: 87  DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNA 146
           DL            + EK   +++L+  +G              +++       A +   
Sbjct: 52  DLR------KDLDLLFEKVKEVDILVLNAGG-------PKAGFFDELTNEDFKEAIDSLF 98

Query: 147 VGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-C 205
           +  I ++++  P +K  G G    +   +           + +   ++  +++ AL    
Sbjct: 99  LNMIKIVRNYLPAMKEKGWGRIVAITSFS---------VISPIENLYTSNSARMALTGFL 149

Query: 206 KILAMDF 212
           K L+ + 
Sbjct: 150 KTLSFEV 156

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 43.5 bits (101), Expect = 7e-06
 Identities = 17/106 (16%), Positives = 34/106 (32%), Gaps = 19/106 (17%)

Query: 30  VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-------------- 75
           V+LV GA++ +G   A+ L  +      +   R+   A  L    N              
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYA-VCLHYHRSAAEANALSATLNARRPNSAITVQADL 62

Query: 76  ----RFPERLDVLQLDLTVESTIEASAKSIKEKYGSLNLLINASGI 117
                 P         +T+ +       +    +G  ++L+N +  
Sbjct: 63  SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS 108

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.5 bits (99), Expect = 1e-05
 Identities = 25/190 (13%), Positives = 55/190 (28%), Gaps = 34/190 (17%)

Query: 27  KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQL 86
           +    LV G    +G    +    +N    V +     N                 ++++
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWW--VASIDVVENEEA----------SASVIVKM 48

Query: 87  DLTVESTIEASAKSIKEKYGS--LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
             +     +     + +  G   ++ ++  +G  +  N        N        L ++ 
Sbjct: 49  TDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKN------CDLMWKQ 102

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI-GDNRLGGWHSYRASKAALN 203
           +     +     +  LK GG                 G+    +   G   Y  +K A++
Sbjct: 103 SIWTSTISSHLATKHLKEGGLLT------------LAGAKAALDGTPGMIGYGMAKGAVH 150

Query: 204 Q-CKILAMDF 212
           Q C+ LA   
Sbjct: 151 QLCQSLAGKN 160

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 42.2 bits (98), Expect = 1e-05
 Identities = 15/184 (8%), Positives = 45/184 (24%), Gaps = 32/184 (17%)

Query: 32  LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVE 91
           +V G    +G    +   +      V+    + N             +   ++  +    
Sbjct: 6   IVYGGKGALGSAILEFFKKNGYT--VLNIDLSANDQ----------ADSNILVDGNKNWT 53

Query: 92  STIEASAKSIKE--KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGP 149
              ++  +      +   ++ +                +  +K    +  L  + +    
Sbjct: 54  EQEQSILEQTASSLQGSQVDGVFCV------AGGWAGGSASSKDFVKNADLMIKQSVWSS 107

Query: 150 ILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ-CKIL 208
            +  K  +           +   ++    A               Y  +KAA++     L
Sbjct: 108 AIAAKLATT--------HLKPGGLLQLTGAAAAMGPTPS---MIGYGMAKAAVHHLTSSL 156

Query: 209 AMDF 212
           A   
Sbjct: 157 AAKD 160

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 41.1 bits (95), Expect = 3e-05
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 26 WK-GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR 76
          WK  G  LV G + G+G + A+ L  +     ++   R+   A G  +L   
Sbjct: 6  WKPTGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAE 56

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.7 bits (88), Expect = 3e-04
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 32 LVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD 72
          LV GAS   G    K+L E +DK       R+  G   +  
Sbjct: 7  LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG 47

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 37.9 bits (86), Expect = 5e-04
 Identities = 10/64 (15%), Positives = 17/64 (26%), Gaps = 3/64 (4%)

Query: 26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ 85
          W+G    V G +   G   +  L        V            L +   R  + +    
Sbjct: 6  WQGKRVFVTGHTGFKGGWLSLWLQTMGAT--VKGYSLTAPTVPSLFETA-RVADGMQSEI 62

Query: 86 LDLT 89
           D+ 
Sbjct: 63 GDIR 66

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 37.9 bits (86), Expect = 6e-04
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 4/68 (5%)

Query: 24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL--KNRFPERL 81
          V  +G + LV GA+  +     +QLLE   K  V  T R+ +    L             
Sbjct: 7  VLPEGSLVLVTGANGFVASHVVEQLLEHGYK--VRGTARSASKLANLQKRWDAKYPGRFE 64

Query: 82 DVLQLDLT 89
            +  D+ 
Sbjct: 65 TAVVEDML 72

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 36.2 bits (82), Expect = 0.001
 Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 5/92 (5%)

Query: 27  KGGVSLVQGAS--RGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
           KG   L+ G +  + I    A+    +     +  T  N +    +  +         V 
Sbjct: 4   KGKKGLIVGVANNKSIAYGIAQSCFNQGAT--LAFTYLNESLEKRVRPIAQELNSPY-VY 60

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASG 116
           +LD++ E   ++   S+K+  GSL+ ++++  
Sbjct: 61  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVA 92

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 35.7 bits (81), Expect = 0.002
 Identities = 24/189 (12%), Positives = 58/189 (30%), Gaps = 19/189 (10%)

Query: 27  KGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL 84
            G   LV G +    I    A+ +  +  +  +  T +N      + +   +    + + 
Sbjct: 4   SGKRILVTGVASKLSIAYGIAQAMHREGAE--LAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61

Query: 85  QLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEV 144
                  S     A+  K        + +       P        +N V +    +A+++
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGF---APGDQLDGDYVNAVTREGFKIAHDI 118

Query: 145 NAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQ 204
           ++   + + K    +L  G          +  LS          +  ++    +KA+L  
Sbjct: 119 SSYSFVAMAKACRSMLNPGS--------ALLTLSYLGAERA---IPNYNVMGLAKASLEA 167

Query: 205 -CKILAMDF 212
             + +A   
Sbjct: 168 NVRYMANAM 176

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	214
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.98
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.98
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.98
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.97
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.97
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.96
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.96
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.95
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.95
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.94
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.93
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.92
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.92
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.92
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.91
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.9
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.81
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.79
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.78
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.71
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.68
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.68
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.67
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.67
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.64
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.63
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.63
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.6
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.58
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.57
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.55
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.54
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.53
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.52
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.52
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.5
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.49
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.48
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.46
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.45
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.37
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.31
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.23
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.13
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.11
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.01
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.85
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.85
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.43
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.35
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.79
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.78
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.73
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.72
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.7
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.58
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.58
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.52
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.51
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.45
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.45
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.44
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.43
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.4
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.38
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.33
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.3
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.3
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.29
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.15
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.14
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.12
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.1
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.1
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.04
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.01
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.0
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.96
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.95
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.94
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.89
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.88
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.87
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.85
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.83
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.79
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.76
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.76
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.74
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.74
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.6
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.54
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.53
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.53
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.51
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.45
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.43
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.37
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.36
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.32
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.29
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.23
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.22
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.21
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.19
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.1
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.02
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.0
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.99
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.83
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.78
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.75
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	95.74
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.73
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.7
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.67
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.64
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.5
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.44
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.41
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.35
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	95.21
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.17
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.13
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.08
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.92
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.91
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.89
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.81
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.77
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	94.51
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	94.49
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.25
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.92
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	93.58
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.5
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.39
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.36
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.35
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.33
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	93.16
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.13
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.1
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.94
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	92.83
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	92.65
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	92.63
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.51
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	92.48
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	92.23
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	92.13
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	91.98
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.71
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	91.62
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.53
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	91.48
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.31
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.06
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	91.03
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	91.03
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.93
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	90.76
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	90.54
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	90.32
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	90.23
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	90.1
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	89.89
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	89.82
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	89.76
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	89.45
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.4
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	89.39
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.26
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	89.0
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	88.93
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	88.89
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	88.81
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	88.78
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	88.75
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	88.69
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	88.64
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.61
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	88.57
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	88.53
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	88.51
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	88.48
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	88.35
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	88.32
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	88.31
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	88.19
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.18
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	88.11
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	87.92
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	87.9
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	87.83
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	87.69
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	87.51
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	87.43
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	87.41
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	87.41
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.18
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	87.15
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	87.1
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	87.06
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	86.94
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	86.78
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	86.68
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	86.65
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.5
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.44
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	86.28
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.07
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	85.41
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	85.34
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	85.26
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	84.92
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	84.82
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	84.06
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	83.74
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	83.63
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	83.53
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	83.36
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	83.19
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	82.86
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	82.73
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	82.59
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	82.56
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	82.47
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	82.24
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	82.2
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	81.92
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	81.9
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	81.83
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	81.76
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	81.66
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	81.25
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	80.96
d1vb3a1	428	Threonine synthase {Escherichia coli [TaxId: 562]}	80.82
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	80.73
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	80.47
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	80.2

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.5e-39  Score=254.24  Aligned_cols=172  Identities=23%  Similarity=0.341  Sum_probs=154.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccccc-chhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ++|+||++|||||++|||+++|++|+++|++  |++++|+++++++.. ++..+.+.++.+++||++|+++++++++++.
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   78 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCS--VVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK   78 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            5799999999999999999999999999997  999999988877643 4445567789999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|+||||||...       ..++.+.+.++|++.+++|+.++|+++|.++|+|++++.|      +|||++|..+
T Consensus        79 ~~~g~iDiLVnnAG~~~-------~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~Ii~i~S~~~  145 (251)
T d1vl8a_          79 EKFGKLDTVVNAAGINR-------RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNP------SIINIGSLTV  145 (251)
T ss_dssp             HHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSC------EEEEECCGGG
T ss_pred             HHcCCCCEEEECCCCCC-------CCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccc------cccccccchh
Confidence            99999999999999864       6789999999999999999999999999999999988876      9999999876


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ....  .++...|+++|+|+++|+|+| .||
T Consensus       146 ~~~~--~~~~~~Y~asKaal~~lt~~lA~e~  174 (251)
T d1vl8a_         146 EEVT--MPNISAYAASKGGVASLTKALAKEW  174 (251)
T ss_dssp             TCCC--SSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccc--CccccchHHHHHhHHHHHHHHHHHh
Confidence            5532  577889999999999999999 444

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.3e-39  Score=256.52  Aligned_cols=172  Identities=22%  Similarity=0.264  Sum_probs=159.3

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+.+++|++|||||++|||+++|++|+++|++  |++++|+++.++++.+.+.+.+.++.++++|++|+++++++++++.
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~--V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSH--VICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSE--EEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999997  9999999988888777777778899999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|+||||||...       ..++.+.+.++|++.+++|+.++++++|+++|+|++++.|      +|||+||..+
T Consensus        83 ~~~g~iDilvnnag~~~-------~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~IVnisS~~~  149 (251)
T d2c07a1          83 TEHKNVDILVNNAGITR-------DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYG------RIINISSIVG  149 (251)
T ss_dssp             HHCSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCE------EEEEECCTHH
T ss_pred             HhcCCceeeeecccccc-------ccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCe------EEEEECCHHh
Confidence            99999999999999875       5677889999999999999999999999999999988766      9999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+|+++|+|+| .||
T Consensus       150 ~~~---~~~~~~Y~asKaal~~ltr~lA~el  177 (251)
T d2c07a1         150 LTG---NVGQANYSSSKAGVIGFTKSLAKEL  177 (251)
T ss_dssp             HHC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            888   688899999999999999999 444

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.1e-38  Score=252.10  Aligned_cols=168  Identities=19%  Similarity=0.300  Sum_probs=153.4

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|++..  +.++.++..+.++.+++||++|+++++++++++.++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~--V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGAD--IAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999997  9999998753  344556667789999999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.++|+++|.++|+|++++.|      +|||+||..+..
T Consensus        78 ~G~iDilVnnAG~~~-------~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~Iv~isS~~~~~  144 (247)
T d2ew8a1          78 FGRCDILVNNAGIYP-------LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWG------RIINLTSTTYWL  144 (247)
T ss_dssp             HSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGGS
T ss_pred             cCCCCEEEECCCCCC-------CCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCC------Cccccccchhcc
Confidence            999999999999874       6788999999999999999999999999999999988765      999999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|+++|+|+.+|+|+| .||
T Consensus       145 ~---~~~~~~Y~asKaal~~ltk~lA~el  170 (247)
T d2ew8a1         145 K---IEAYTHYISTKAANIGFTRALASDL  170 (247)
T ss_dssp             C---CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c---CcccccchhhhccHHHHHHHHHHHh
Confidence            8   688899999999999999999 444

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.9e-39  Score=255.68  Aligned_cols=173  Identities=22%  Similarity=0.299  Sum_probs=158.1

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ..+|+|+||++|||||++|||+++|++|+++|++  |++++|++++++++.+.+.+.+.++.+++||++|++++++++++
T Consensus         4 ~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~   81 (255)
T d1fmca_           4 SDNLRLDGKCAIITGAGAGIGKEIAITFATAGAS--VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF   81 (255)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Confidence            3467899999999999999999999999999998  99999999888887777777788999999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.++++++|+||||||...       ..++ +.+.++|++.+++|+.++|+++|.++|+|++++.+      +|||+||.
T Consensus        82 ~~~~~g~iDilvnnAG~~~-------~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g------~Ii~isS~  147 (255)
T d1fmca_          82 AISKLGKVDILVNNAGGGG-------PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG------VILTITSM  147 (255)
T ss_dssp             HHHHHSSCCEEEECCCCCC-------CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCG
T ss_pred             HHHHcCCCCEeeeCCcCCC-------CCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccccc------cccccccc
Confidence            9999999999999999874       3344 78999999999999999999999999999998765      99999999


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHhc-cc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILAM-DF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la-~~  212 (214)
                      .+..+   .+++..|+++|+|+.+|+|+|| ||
T Consensus       148 ~~~~~---~~~~~~Y~asKaal~~lt~~lA~el  177 (255)
T d1fmca_         148 AAENK---NINMTSYASSKAAASHLVRNMAFDL  177 (255)
T ss_dssp             GGTCC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhcc---ccccccchhHHHHHHHHHHHHHHHh
Confidence            99888   6889999999999999999994 44

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=9.3e-39  Score=254.08  Aligned_cols=172  Identities=22%  Similarity=0.282  Sum_probs=158.9

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++|+||++|||||++|||+++|++|+++|++  |++.+|++++++++.+.+...+.++.+++||++|+++++++++++.
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGAS--VYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999997  9999999988888777777778889999999999999999999999


Q ss_pred             HHcC-CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          103 EKYG-SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       103 ~~~~-~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      ++++ ++|++|||||...       ..++.+.+.++|++.+++|+.++|+++|.++|+|++++.|      +|||++|..
T Consensus        81 ~~~~~~idilvnnAG~~~-------~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~Ii~isS~~  147 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVI-------YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG------NVVFISSVS  147 (259)
T ss_dssp             HHTTTCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSE------EEEEECCGG
T ss_pred             HHhCCCceEEEECCceec-------cCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccc------ccccccccc
Confidence            9886 8999999999874       6778999999999999999999999999999999988776      999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|+++|+|+.+|+|+| .||
T Consensus       148 ~~~~---~~~~~~Y~asKaal~~lt~~lA~el  176 (259)
T d2ae2a_         148 GALA---VPYEAVYGATKGAMDQLTRCLAFEW  176 (259)
T ss_dssp             GTSC---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccc---cccccchHHHHHHHHHHHHHHHHHh
Confidence            9887   688999999999999999999 554

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=4.6e-39  Score=256.03  Aligned_cols=171  Identities=22%  Similarity=0.282  Sum_probs=158.7

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +|+||++|||||++|||+++|++|+++|++  |++++|+++.++++.+.+.+.+.++..++||++|+++++++++++.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTA--IALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999997  999999998888877777777889999999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||||...      +..++.+.+.++|++.+++|+.++++++|+++|+|++++.|      +|||+||..+..
T Consensus        80 ~g~iDilVnnaG~~~------~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G------~II~isS~~~~~  147 (260)
T d1zema1          80 FGKIDFLFNNAGYQG------AFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYG------RIVNTASMAGVK  147 (260)
T ss_dssp             HSCCCEEEECCCCCC------CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHHS
T ss_pred             hCCCCeehhhhcccc------ccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCC------CCCeeechhhcc
Confidence            999999999999864      35789999999999999999999999999999999887765      999999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .+++..|+++|+|+.+|+|+| .||
T Consensus       148 ~---~~~~~~Y~asKaal~~ltk~lA~el  173 (260)
T d1zema1         148 G---PPNMAAYGTSKGAIIALTETAALDL  173 (260)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C---CcchHHHHHHHHHHHHHHHHHHHHh
Confidence            8   688999999999999999999 444

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=7.1e-39  Score=254.59  Aligned_cols=171  Identities=18%  Similarity=0.285  Sum_probs=154.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc--CCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +|+||++|||||++|||+++|++|+++|++  |++++|+.+.++...+.+.+  .+.++.+++||++|+++++++++++.
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   78 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAK--LSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   78 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHH
Confidence            489999999999999999999999999997  99999999887765444432  24578999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|+||||||+..      +..++.+.+.++|++.+++|+.++|+++|++.|+|++++.|      +|||+||..+
T Consensus        79 ~~~G~iDiLVnnAG~~~------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G------~Ii~isS~~~  146 (258)
T d1iy8a_          79 ERFGRIDGFFNNAGIEG------KQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSG------MVVNTASVGG  146 (258)
T ss_dssp             HHHSCCSEEEECCCCCC------CCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCGGG
T ss_pred             HHhCCCCEEEECCcccc------cCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCC------CCcccccHhh
Confidence            99999999999999764      35778899999999999999999999999999999988776      9999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+|+.+|+|+| .||
T Consensus       147 ~~~---~~~~~~Y~asKaal~~lt~~lA~el  174 (258)
T d1iy8a_         147 IRG---IGNQSGYAAAKHGVVGLTRNSAVEY  174 (258)
T ss_dssp             TSB---CSSBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            888   688999999999999999999 554

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-39  Score=252.79  Aligned_cols=169  Identities=20%  Similarity=0.284  Sum_probs=157.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++.||++|||||++|||+++|++|+++|++  |++.+|++++++++.+.+...+.++.++.||++|+++++++++++.+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~--V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSK--LVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999998  99999999998888777877788999999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +++++|++|||||...       ..++.+.++++|++.+++|+.|++++++.++|+|++++.|      +|||+||..+.
T Consensus        81 ~~g~idilinnag~~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G------~Iv~isS~~~~  147 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVY-------TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHG------HIVTVASAAGH  147 (244)
T ss_dssp             HTCCCSEEEECCCCCC-------CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCCC-C
T ss_pred             HcCCCceeEeeccccc-------cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCc------eEEEeecchhc
Confidence            9999999999999875       5667889999999999999999999999999999998876      99999999999


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .+   .+++..|++||+|+.+|+++|+
T Consensus       148 ~~---~~~~~~Y~asKaal~~~~~~La  171 (244)
T d1yb1a_         148 VS---VPFLLAYCSSKFAAVGFHKTLT  171 (244)
T ss_dssp             CC---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCcHHHHHHHHHHHHHHHHHH
Confidence            88   6889999999999999999994

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=2.1e-38  Score=252.25  Aligned_cols=172  Identities=20%  Similarity=0.297  Sum_probs=156.3

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+|+||++|||||++|||+++|++|+++|++  |++.+|+.+ .++.+.+.+.+.+.++.+++||++|+++++++++++.
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAK--VVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            4799999999999999999999999999997  999999865 4555677777778899999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.+     +.|+|+||..+
T Consensus        81 ~~~G~iDiLVnnAG~~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g-----~~Iv~isS~~~  148 (261)
T d1geea_          81 KEFGKLDVMINNAGLEN-------PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIK-----GTVINMSSVHE  148 (261)
T ss_dssp             HHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-----CEEEEECCGGG
T ss_pred             HHhCCCCEeeccceecC-------CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccccc-----ccccccccchh
Confidence            99999999999999875       5678899999999999999999999999999999887765     47999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .+++..|+++|+|+.+|+|+| .||
T Consensus       149 ~~~---~~~~~~Y~asKaal~~lt~~lA~e~  176 (261)
T d1geea_         149 KIP---WPLFVHYAASKGGMKLMTETLALEY  176 (261)
T ss_dssp             TSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccc---CccccccccCCccchhhHHHHHHHh
Confidence            887   688999999999999999999 444

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.2e-39  Score=252.81  Aligned_cols=167  Identities=28%  Similarity=0.413  Sum_probs=152.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +|+||+++||||++|||+++|++|+++|++  |++.+|+++.++++.+.+   +.++..++||++|+++++++++++.++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~--Vv~~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQAISDYL---GANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            589999999999999999999999999997  999999987766554444   457889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.++|+++|.++|+|++++.|      +|||+||..+..
T Consensus        76 ~g~iDilVnnAg~~~-------~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~II~isS~~~~~  142 (243)
T d1q7ba_          76 FGEVDILVNNAGITR-------DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHG------RIITIGSVVGTM  142 (243)
T ss_dssp             TCSCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCHHHHH
T ss_pred             cCCcceehhhhhhcc-------ccccccccccccccccceeechhhhhHHHHHHHHHHcCCC------EeeeecchhhcC
Confidence            999999999999875       6788999999999999999999999999999999987765      999999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|+++|+|+++|+|+| .||
T Consensus       143 ~---~~~~~~Y~asKaal~~lt~~lA~el  168 (243)
T d1q7ba_         143 G---NGGQANYAAAKAGLIGFSKSLAREV  168 (243)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C---CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            8   688899999999999999999 444

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=3e-38  Score=250.03  Aligned_cols=168  Identities=23%  Similarity=0.337  Sum_probs=154.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +|+||++|||||++|||+++|++|+++|++  |++++|+++.++++.+.+.. +.++.+++||++|+++++++++++.++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAK--VMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999998  99999998877766655543 568999999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.++|+++|.++|+|++++.|     ++|||+||..+..
T Consensus        80 ~G~iDiLVnnAg~~~-------~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~g-----g~Ii~isS~~~~~  147 (251)
T d1zk4a1          80 FGPVSTLVNNAGIAV-------NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLG-----ASIINMSSIEGFV  147 (251)
T ss_dssp             HSSCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC-----EEEEEECCGGGTS
T ss_pred             hCCceEEEecccccc-------ccchhcccccchhhhccccccccchhHHHHHHHHHhcCCC-----CceEeeeccceec
Confidence            999999999999875       6788999999999999999999999999999999988765     5899999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +   .++...|+++|+|+.+|++++|
T Consensus       148 ~---~~~~~~Y~asKaal~~lt~~lA  170 (251)
T d1zk4a1         148 G---DPSLGAYNASKGAVRIMSKSAA  170 (251)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             c---CCCchhHHHHHHHHhcchHHHH
Confidence            7   6888999999999999999984

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=2.3e-38  Score=250.89  Aligned_cols=167  Identities=25%  Similarity=0.376  Sum_probs=152.5

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +|+||++|||||++|||+++|++|+++|++  |++++|+++++++   ..++.+.++.+++||++|+++++++++++.++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGAR--VVLADVLDEEGAA---TARELGDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHH---HHHTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHH---HHHHhCCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999997  9999998866544   34444678999999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|      +|||+||..+..
T Consensus        77 ~g~iDilVnnAg~~~-------~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G------~II~isS~~~~~  143 (254)
T d1hdca_          77 FGSVDGLVNNAGIST-------GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGG------SIVNISSAAGLM  143 (254)
T ss_dssp             HSCCCEEEECCCCCC-------CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTS
T ss_pred             cCCccEEEecCcccc-------ccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCC------eecccccchhcc
Confidence            999999999999875       6788999999999999999999999999999999988765      999999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|+++|+|+.+|+|+| .||
T Consensus       144 ~---~~~~~~Y~asKaal~~lt~~lA~e~  169 (254)
T d1hdca_         144 G---LALTSSYGASKWGVRGLSKLAAVEL  169 (254)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c---ccchhhHHHHHHHHHHHHHHHHHHh
Confidence            8   688999999999999999999 554

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=3.3e-38  Score=250.55  Aligned_cols=169  Identities=21%  Similarity=0.406  Sum_probs=151.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |+|+||++|||||++|||+++|++|+++|++  |++.+|+.++++++.+   +.+.++.+++||++|+++++++++++.+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~---~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGAR--VAIADINLEAARATAA---EIGPAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEE--EEEEESCHHHHHHHHH---HHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHH---HhCCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999997  9999998876555433   3467899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++|.++|+|.+++.+     ++|||+||..+.
T Consensus        76 ~~g~iDilVnnAg~~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~-----g~Iv~isS~~~~  143 (256)
T d1k2wa_          76 RWGSIDILVNNAALFD-------LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRG-----GKIINMASQAGR  143 (256)
T ss_dssp             HHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCGGGT
T ss_pred             HhCCccEEEeeccccc-------ccccccCCHHHHHhhhceeeeccccchhhccchhHHhccC-----Cccccccchhhc
Confidence            9999999999999875       5788999999999999999999999999999987665433     499999999999


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+|+++|+|+| .||
T Consensus       144 ~~---~~~~~~Y~asKaal~~lt~~lA~el  170 (256)
T d1k2wa_         144 RG---EALVGVYCATKAAVISLTQSAGLNL  170 (256)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cc---cccccchhhhhhHHHHHHHHHHHHh
Confidence            88   688999999999999999999 444

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.9e-38  Score=248.91  Aligned_cols=167  Identities=23%  Similarity=0.382  Sum_probs=152.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +|+||++|||||++|||+++|++|+++|++  |++++|++++++.+.+   +.+.++.+++||++|+++++++++++.++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAK--VVFGDILDEEGKAMAA---ELADAARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH---HTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHH---HhhCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999997  9999998876554433   34567899999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.++|+++|.+.|+|++++.|      +|||+||..+..
T Consensus        78 ~g~idilinnAG~~~-------~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~Ii~isS~~~~~  144 (244)
T d1nffa_          78 FGGLHVLVNNAGILN-------IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRG------SIINISSIEGLA  144 (244)
T ss_dssp             HSCCCEEEECCCCCC-------CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTS
T ss_pred             hCCCeEEEECCcccC-------CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcc------eEEecccccccc
Confidence            999999999999874       6788999999999999999999999999999999988765      999999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .+++..|+++|+|+++|+|+| .||
T Consensus       145 ~---~~~~~~Y~asKaal~~ltk~lA~el  170 (244)
T d1nffa_         145 G---TVACHGYTATKFAVRGLTKSTALEL  170 (244)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c---cccccchhhHHHHHHHHHHHHHHHh
Confidence            8   688999999999999999999 454

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.9e-38  Score=252.18  Aligned_cols=172  Identities=20%  Similarity=0.243  Sum_probs=145.7

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++|+||++|||||++|||+++|++|+++|++  |++++|++++++++.+.+.+.+.++.++.||++++++++++++++.
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~--V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAV--IHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVS   80 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999997  9999999988888777777777789999999999999999999999


Q ss_pred             HHc-CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          103 EKY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       103 ~~~-~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      +++ +++|++|||||...       ..++.+.+.++|++.+++|+.|+|+++|.++|+|++++.|      +|||+||..
T Consensus        81 ~~~~g~idilvnnAG~~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G------~Iv~isS~~  147 (259)
T d1xq1a_          81 SMFGGKLDILINNLGAIR-------SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG------NIIFMSSIA  147 (259)
T ss_dssp             HHHTTCCSEEEEECCC-------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC------EEEEEC---
T ss_pred             HHhCCCcccccccccccC-------CCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccc------ccccccccc
Confidence            998 78999999999875       5778899999999999999999999999999999988776      999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|+++|+|+.+|+|+| .||
T Consensus       148 ~~~~---~~~~~~Y~asKaal~~lt~~lA~e~  176 (259)
T d1xq1a_         148 GVVS---ASVGSIYSATKGALNQLARNLACEW  176 (259)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccc---ccccccccccccchhhhhHHHHHHh
Confidence            9888   578899999999999999999 444

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=5.9e-38  Score=248.96  Aligned_cols=168  Identities=22%  Similarity=0.320  Sum_probs=154.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      .|++|||||++|||+++|++|+++|++  |++.+|++++++++.+.+.+.+.++.+++||++|+++++++++++.+++++
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFA--VAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG   78 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            378999999999999999999999997  999999998888877777777889999999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|+||||||+..       ..++.+.+.++|++.+++|+.|+|+++|+++|+|.+++.+     ++|+++||..+..+  
T Consensus        79 iDilVnnAG~~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~-----g~Iv~isS~~~~~~--  144 (255)
T d1gega_          79 FDVIVNNAGVAP-------STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHG-----GKIINACSQAGHVG--  144 (255)
T ss_dssp             CCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-----EEEEEECCGGGTSC--
T ss_pred             ccEEEecccccc-------cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccc-----cccccccchhhccc--
Confidence            999999999874       6789999999999999999999999999999998776654     58999999999887  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          188 RLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                       .+++..|+++|+|+.+|+|+| .||
T Consensus       145 -~~~~~~Y~asKaal~~ltk~lA~el  169 (255)
T d1gega_         145 -NPELAVYSSSKFAVRGLTQTAARDL  169 (255)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CcccccchhCHHHHHhhHHHHHHHh
Confidence             688999999999999999999 554

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=5.1e-38  Score=249.61  Aligned_cols=168  Identities=25%  Similarity=0.330  Sum_probs=154.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .||++|||||++|||+++|++|+++|++  |++++|++++++++.+.+.+.+.++.+++||++|+++++++++++.++++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLR--VFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4799999999999999999999999997  99999999888887777777788999999999999999999999999999


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhH--HhcCCCCCCCCceEEEEeecCcccC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPL--LKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++|+||||||...       ..++.+.+.++|++.+++|+.|+++++|+++|+  |++++.|      +|||++|..+..
T Consensus        79 ~iDilVnnAG~~~-------~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g------~Ii~i~S~~~~~  145 (257)
T d2rhca1          79 PVDVLVNNAGRPG-------GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTG------RIVNIASTGGKQ  145 (257)
T ss_dssp             SCSEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEE------EEEEECCGGGTS
T ss_pred             CCCEEEecccccC-------CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCc------cccccccccccc
Confidence            9999999999875       578899999999999999999999999999997  4555544      999999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .+++..|+++|+|+.+|+|+| .||
T Consensus       146 ~---~~~~~~Y~asKaal~~ltk~lA~el  171 (257)
T d2rhca1         146 G---VVHAAPYSASKHGVVGFTKALGLEL  171 (257)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             c---cccchhHHHHHHHHHHHHHHHHHHh
Confidence            8   688999999999999999999 554

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=4.5e-38  Score=250.32  Aligned_cols=169  Identities=17%  Similarity=0.233  Sum_probs=152.3

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-Ccccccchh-hcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLK-NRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~-~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |+||++|||||++|||+++|++|+++|++  |++.+|++. .++++.+.+ ...+.++.+++||++|+++++++++++.+
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~--V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGAD--IVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            78999999999999999999999999997  999999753 345544443 44567899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +++++|+||||||...       ..++.+.+.++|++.+++|+.++++++|+++|+|++++.|      +|||+||..+.
T Consensus        80 ~~G~iDiLVnnAG~~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G------~Iv~isS~~~~  146 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQH-------TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG------RIINIASAHGL  146 (260)
T ss_dssp             HHSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             HhCCCcEEEeeccccc-------CCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCc------eEeecccccce
Confidence            9999999999999875       5788999999999999999999999999999999988766      99999999999


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .+++..|+++|+|+.+|+|+| .||
T Consensus       147 ~~---~~~~~~Y~asKaal~~lt~~lA~el  173 (260)
T d1x1ta1         147 VA---SANKSAYVAAKHGVVGFTKVTALET  173 (260)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ec---cCCcchhhhhhhhHHHhHHHHHHHh
Confidence            88   688999999999999999999 444

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=7.2e-38  Score=246.27  Aligned_cols=168  Identities=15%  Similarity=0.203  Sum_probs=154.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCC-----cEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDK-----GCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~-----~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +++|||||++|||+++|++|+++|++     ..|++.+|++++++++.+.+.+.+.++.+++||++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999986     2388999999888887777777788999999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +++++|+||||||...       ..++.+.+.++|++.+++|+.|+|+++|.++|+|++++.|      +|||+||..+.
T Consensus        82 ~~g~iDilvnnAg~~~-------~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G------~Ii~isS~~~~  148 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGR-------FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSG------HIFFITSVAAT  148 (240)
T ss_dssp             HTSCCSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGT
T ss_pred             HcCCcceeeccccccc-------CCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCC------ceEEEechhhc
Confidence            9999999999999875       6788999999999999999999999999999999988766      99999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .+++..|+++|+|+.+|+++| .||
T Consensus       149 ~~---~~~~~~Y~asK~al~~lt~~la~el  175 (240)
T d2bd0a1         149 KA---FRHSSIYCMSKFGQRGLVETMRLYA  175 (240)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCChHHHHHHHHHHHHHHHHHHHh
Confidence            88   688999999999999999999 444

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.7e-37  Score=245.12  Aligned_cols=164  Identities=21%  Similarity=0.257  Sum_probs=147.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .|+||++|||||++|||+++|++|+++|++  |++.+|+++..+.. +   +.  +..+++||++|+++++++++++.++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~--V~~~~~~~~~~~~~-~---~~--~~~~~~~Dv~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGAL--VALCDLRPEGKEVA-E---AI--GGAFFQVDLEDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSTTHHHHH-H---HH--TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHH-H---Hc--CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            489999999999999999999999999997  99999987653322 2   11  3457899999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.|+|+++|+++|+|++++.|      +|||++|..+..
T Consensus        74 ~G~iDiLVnnAG~~~-------~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~Ii~isS~~~~~  140 (248)
T d2d1ya1          74 LGRVDVLVNNAAIAA-------PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGG------AIVNVASVQGLF  140 (248)
T ss_dssp             HSCCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE------EEEEECCGGGTS
T ss_pred             cCCCCeEEEeCcCCC-------CCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccc------cccccccccccc
Confidence            999999999999875       5788899999999999999999999999999999988765      999999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|+++|+|+.+|+|+| .||
T Consensus       141 ~---~~~~~~Y~asKaal~~ltk~lA~el  166 (248)
T d2d1ya1         141 A---EQENAAYNASKGGLVNLTRSLALDL  166 (248)
T ss_dssp             B---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c---ccccchhHHHHHHHHHHHHHHHHHh
Confidence            8   688999999999999999999 544

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3e-37  Score=242.20  Aligned_cols=161  Identities=22%  Similarity=0.336  Sum_probs=139.8

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++|+||++|||||++|||+++|++|+++|++  |++++|+.+..+           ++..++||++|+++++++++++.
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~v~~~~~~~~   68 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHK--VAVTHRGSGAPK-----------GLFGVEVDVTDSDAVDRAFTAVE   68 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSSCCCT-----------TSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCcchhc-----------CceEEEEecCCHHHHHHHHHHHH
Confidence            35699999999999999999999999999998  999999876533           45678999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|+||||||...       ..++.+.+.|+|++.+++|+.++++++|.++|+|++++.|      +|||+||..+
T Consensus        69 ~~~g~iDiLVnnAG~~~-------~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g------~Iv~isS~~~  135 (237)
T d1uzma1          69 EHQGPVEVLVSNAGLSA-------DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFG------RMIFIGSVSG  135 (237)
T ss_dssp             HHHSSCSEEEEECSCCC------------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEEECCCCC
T ss_pred             HhcCCceEEEeeecccc-------cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCC------ceEEEcchhh
Confidence            99999999999999875       5778899999999999999999999999999999998876      9999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .++...|+++|+|+++|+|+| .||
T Consensus       136 ~~~---~~~~~~Y~asKaal~~lt~~lA~e~  163 (237)
T d1uzma1         136 LWG---IGNQANYAASKAGVIGMARSIAREL  163 (237)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccC---CcccHHHHHHHHHHHHHHHHHHhhh
Confidence            887   688899999999999999999 444

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=8.6e-38  Score=246.40  Aligned_cols=166  Identities=26%  Similarity=0.347  Sum_probs=150.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEe-ecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT-CRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +++|||||++|||+++|++|+++|++  |++. .|+++.++.+.+.+.+.+.++.+++||++|+++++++++++.+++++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~--V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCK--VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999998  7765 45666666677777777889999999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|+||||||...       ..++.+.+.++|++.+++|+.++|+++|.++|+|++++.|      +|||+||..+..+  
T Consensus        80 iDiLVnnAg~~~-------~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G------~IVnisS~~~~~~--  144 (244)
T d1edoa_          80 IDVVVNNAGITR-------DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG------RIINIASVVGLIG--  144 (244)
T ss_dssp             CSEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCTHHHHC--
T ss_pred             CCcccccccccc-------ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCc------EEEEEcChhhcCC--
Confidence            999999999875       6788999999999999999999999999999999988765      9999999999888  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          188 RLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                       .++...|+++|+|+.+|+|+| .||
T Consensus       145 -~~~~~~Y~asKaal~~ltk~lA~el  169 (244)
T d1edoa_         145 -NIGQANYAAAKAGVIGFSKTAAREG  169 (244)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHChHHHHHHH
Confidence             688899999999999999999 444

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-37  Score=245.92  Aligned_cols=166  Identities=23%  Similarity=0.371  Sum_probs=148.5

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +|+||++|||||++|||+++|++|+++|++  |++++|+++.++++.+..    .++.+++||++|+++++++++++.++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGAR--VVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRR   76 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHh
Confidence            689999999999999999999999999997  999999887655544332    45889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...      ...++.+.+.++|++.+++|+.++|+++|+++|+|++++ |      +|||+||..+..
T Consensus        77 ~g~iDilVnnAG~~~------~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G------~Ii~isS~~~~~  143 (250)
T d1ydea1          77 FGRLDCVVNNAGHHP------PPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-G------NVINISSLVGAI  143 (250)
T ss_dssp             HSCCCEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCHHHHH
T ss_pred             cCCCCEEEecccccc------cccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-C------CCcccccccccc
Confidence            999999999999764      346678999999999999999999999999999998754 4      999999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|+++|+|+.+|+|+| .||
T Consensus       144 ~---~~~~~~Y~asKaal~~lt~~lA~e~  169 (250)
T d1ydea1         144 G---QAQAVPYVATKGAVTAMTKALALDE  169 (250)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c---ccCcchhHHHHhhHHHHHHHHHHHh
Confidence            8   688899999999999999999 544

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.6e-37  Score=244.86  Aligned_cols=166  Identities=23%  Similarity=0.336  Sum_probs=150.2

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|++++++++.+.   .+.+..+++||++|+++++++++++.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~--V~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAK--VAFSDINEAAGQQLAAE---LGERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHH---HCTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHH---hCCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999997  99999988765554433   3678899999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||||...       ..++.+.+.++|++.+++|+.++|+++|.++|+|++++       ++|||+||..+..
T Consensus        78 ~g~iDilVnnAG~~~-------~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------G~Iv~isS~~~~~  143 (253)
T d1hxha_          78 LGTLNVLVNNAGILL-------PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-------GSIINMASVSSWL  143 (253)
T ss_dssp             HCSCCEEEECCCCCC-------CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-------EEEEEECCGGGTS
T ss_pred             hCCCCeEEecccccC-------CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-------Cceecccchhhhc
Confidence            999999999999875       56788999999999999999999999999999997654       4999999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .++...|+++|+|+.+|+|++ .||
T Consensus       144 ~---~~~~~~Y~asKaal~~lt~~lA~e~  169 (253)
T d1hxha_         144 P---IEQYAGYSASKAAVSALTRAAALSC  169 (253)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C---ccccccccchhHHHHHHHHHHHHHH
Confidence            8   688899999999999999999 444

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.4e-37  Score=240.73  Aligned_cols=165  Identities=19%  Similarity=0.237  Sum_probs=145.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |+|+||++|||||++|||+++|++|+++|++  |++++|++++++++.+.+     +..+++||++|+++++++++++.+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~--V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGAR--LVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999997  999999887655543322     467899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +++++|+||||||...       ..++.+.+.++|++.+++|+.|+|+++|+++|+|++++.+      .++++||. +.
T Consensus        74 ~~g~iDilVnnAG~~~-------~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~------~i~~~ss~-~~  139 (242)
T d1ulsa_          74 HLGRLDGVVHYAGITR-------DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG------SIVLTASR-VY  139 (242)
T ss_dssp             HHSSCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE------EEEEECCG-GG
T ss_pred             hcCCceEEEECCcccc-------cCchhhCcchhhhccccccchhhhhhhhhccccccccccc------eeeeeccc-cc
Confidence            9999999999999875       5788999999999999999999999999999999987764      77777764 44


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+|+.+|+|+| .||
T Consensus       140 ~~---~~~~~~Y~asKaal~~ltk~lA~el  166 (242)
T d1ulsa_         140 LG---NLGQANYAASMAGVVGLTRTLALEL  166 (242)
T ss_dssp             GC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCCcchHHHHHHHHHHHHHHHHHH
Confidence            44   578899999999999999999 554

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-36  Score=240.16  Aligned_cols=174  Identities=22%  Similarity=0.256  Sum_probs=152.6

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC--CceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|++++++++.+.+...+  .++++++||++++++++++++++.
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~--Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLK--VVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            399999999999999999999999999997  9999999988888766665543  478899999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|+||||||...       ..++.+.+.++|++.+++|+.++|++++.++|+|++++..    .++||++||..+
T Consensus        85 ~~~g~iD~lVnnAg~~~-------~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~----~g~Ii~isS~~~  153 (257)
T d1xg5a_          85 SQHSGVDICINNAGLAR-------PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVD----DGHIININSMSG  153 (257)
T ss_dssp             HHHCCCSEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC----SCEEEEECCGGG
T ss_pred             HhcCCCCEEEecccccC-------CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccC----CCceEEEechHh
Confidence            99999999999999874       5788999999999999999999999999999998875421    149999999988


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .... |.++...|+++|+|+.+|+|+| .||
T Consensus       154 ~~~~-p~~~~~~Y~~sKaal~~ltr~la~el  183 (257)
T d1xg5a_         154 HRVL-PLSVTHFYSATKYAVTALTEGLRQEL  183 (257)
T ss_dssp             TSCC-SCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCC-CCcccHHHHHHHHHHHhCHHHHHHHH
Confidence            7542 2456778999999999999999 444

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.7e-36  Score=240.76  Aligned_cols=171  Identities=23%  Similarity=0.307  Sum_probs=159.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++|+||++|||||++|||+++|++|+++|++  |++++|++++++++.+.+.+.+.+++++.||++++++++++++++.+
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~--V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   79 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGAR--VYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH   79 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999998  99999999888888888888888999999999999999999999999


Q ss_pred             Hc-CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          104 KY-GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       104 ~~-~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++ +++|+||||||...       ..++.+.+.++|++.+++|+.+++++++++.|+|.+++.|      +||++||..+
T Consensus        80 ~~~g~idilinnag~~~-------~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g------~ii~isS~~~  146 (258)
T d1ae1a_          80 VFDGKLNILVNNAGVVI-------HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG------NVIFLSSIAG  146 (258)
T ss_dssp             HTTSCCCEEEECCCCCC-------CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSE------EEEEECCGGG
T ss_pred             HhCCCcEEEeccccccc-------cCccccCCHHHHhhhhhhcccccccccccccccccccccc------cccccccccc
Confidence            98 68999999999875       5788999999999999999999999999999999998876      9999999999


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .+++..|+++|+|+++|+|+| +||
T Consensus       147 ~~~---~~~~~~Y~~sK~al~~lt~~lA~el  174 (258)
T d1ae1a_         147 FSA---LPSVSLYSASKGAINQMTKSLACEW  174 (258)
T ss_dssp             TSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccc---cccchhHHHHHHHHHHHHHHHHHhc
Confidence            888   688999999999999999999 554

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=2.4e-36  Score=240.28  Aligned_cols=178  Identities=18%  Similarity=0.258  Sum_probs=153.7

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc-cchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ...|+|+||++|||||++|||+++|++|+++|++  |++++|+.+++++. +++..+.+.++.+++||++|+++++++++
T Consensus         2 ~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~   79 (260)
T d1h5qa_           2 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGAN--VAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ   79 (260)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEE--EEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHH
Confidence            3467899999999999999999999999999997  99999999887764 44445567789999999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.++++++|+||||||...       ..++.+.+.++|++.+++|+.|+++++|.++|+|.+++.+     +.|+++++
T Consensus        80 ~~~~~~g~iDilVnnAg~~~-------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~-----g~i~~~~s  147 (260)
T d1h5qa_          80 QIDADLGPISGLIANAGVSV-------VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQK-----GSIVVTSS  147 (260)
T ss_dssp             HHHHHSCSEEEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECC
T ss_pred             HHHHHhCCCcEecccccccc-------cCCHHHhccccccccccccccchhhhhhhhcccccccccc-----eEEEEeec
Confidence            99999999999999999874       6788999999999999999999999999999998655443     48888888


Q ss_pred             CcccCCC----CCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGD----NRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~----~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .......    .+.++...|+++|+|+.+|+|+| .||
T Consensus       148 ~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el  185 (260)
T d1h5qa_         148 MSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEW  185 (260)
T ss_dssp             GGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCccccchhhhhhhHHHHHHHHHHHh
Confidence            7654432    12466789999999999999999 444

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=3.2e-36  Score=240.55  Aligned_cols=173  Identities=18%  Similarity=0.277  Sum_probs=151.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .+|+||++|||||++|||+++|++|+++|++  |++++|++++++++.+.+.. .+.+.+++||++|+++++++++++.+
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~l~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAK--VVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIA   78 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHhcC-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3699999999999999999999999999997  99999998887776666544 44688899999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +++++|++|||||....     ....+.+.+.++|++.+++|+.|+|+++|.++|+|++++.|      +||+++|..+.
T Consensus        79 ~~g~iD~lVnnAG~~~~-----~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g------~ii~iss~~~~  147 (268)
T d2bgka1          79 KHGKLDIMFGNVGVLST-----TPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG------SIVFTASISSF  147 (268)
T ss_dssp             HHSCCCEEEECCCCCCS-----SCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCE------EEEEECCGGGT
T ss_pred             HcCCcceeccccccccC-----CCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCC------Ccccccccccc
Confidence            99999999999998641     12357788999999999999999999999999999988776      99999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+.  .+....|+++|+|+.+|+|+| .||
T Consensus       148 ~~~--~~~~~~Y~asKaal~~lt~~lA~el  175 (268)
T d2bgka1         148 TAG--EGVSHVYTATKHAVLGLTTSLCTEL  175 (268)
T ss_dssp             CCC--TTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccc--cccccccchhHHHHHhCHHHHHHHh
Confidence            773  233458999999999999999 554

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-36  Score=246.12  Aligned_cols=172  Identities=18%  Similarity=0.243  Sum_probs=150.7

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc------cccchhhcCCCceeEEEecCCCHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT------GLLDLKNRFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      +|+|+||++|||||++|||+++|++|+++|++  |++.+++.+...      .+++...+.+.+.....+|++|.+++++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~--Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~   79 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGAL--VVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEK   79 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHH
Confidence            47899999999999999999999999999997  999988765321      1233333334456677899999999999


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                      +++++.+++|++|+||||||+..       ..++.+.+.++|++.+++|+.|+|+++|.++|+|++++.|      +|||
T Consensus        80 ~v~~~~~~~G~iDiLVnNAGi~~-------~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G------~IV~  146 (302)
T d1gz6a_          80 LVKTALDTFGRIDVVVNNAGILR-------DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG------RIIM  146 (302)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE------EEEE
T ss_pred             HHHHHHHHcCCCCEEEECCccCC-------CCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCc------EEEE
Confidence            99999999999999999999875       6789999999999999999999999999999999988765      9999


Q ss_pred             eecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          177 LSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       177 iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +||..+..+   .++...|+++|+|+.+|+++| .|+
T Consensus       147 isS~~~~~~---~~~~~~Y~asKaal~~lt~~la~E~  180 (302)
T d1gz6a_         147 TASASGIYG---NFGQANYSAAKLGLLGLANTLVIEG  180 (302)
T ss_dssp             ECCHHHHHC---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eCChhhcCC---CCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            999999888   688999999999999999999 444

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5.5e-36  Score=239.84  Aligned_cols=172  Identities=20%  Similarity=0.258  Sum_probs=151.1

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC---CceeEEEecCCCHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +|+||++|||||++|||+++|++|+++|++  |++.+|++++++++.+.+.+.+   .++.+++||++|+++++++++++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   78 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQ--VTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT   78 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHH
Confidence            489999999999999999999999999997  9999999888887666665543   36889999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++++|++|||||....     ......+.+.++|++.+++|+.++|+++|+++|+|++++.+      .|+++||..
T Consensus        79 ~~~~G~iDilVnnAG~~~~-----~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g------~ii~~ss~~  147 (274)
T d1xhla_          79 LAKFGKIDILVNNAGANLA-----DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGE------IVNVSSIVA  147 (274)
T ss_dssp             HHHHSCCCEEEECCCCCCC-----CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE------EEEECCGGG
T ss_pred             HHHcCCceEEEeecccccc-----cccccccCCHHHHHHHHhhcccccccccccccccccccccc------cccchhhhh
Confidence            9999999999999997541     12345667889999999999999999999999999987765      899999888


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .+++..|+++|+|+.+|||+| .||
T Consensus       148 ~~~~---~~~~~~Y~asKaal~~ltk~lA~el  176 (274)
T d1xhla_         148 GPQA---HSGYPYYACAKAALDQYTRCTAIDL  176 (274)
T ss_dssp             SSSC---CTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccc---CCCCceehhhhhHHHHHHHHHHHHH
Confidence            8777   688899999999999999999 454

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5e-36  Score=239.88  Aligned_cols=174  Identities=20%  Similarity=0.245  Sum_probs=147.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC---CceeEEEecCCCHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ++|+||++|||||++|||+++|++|+++|++  |++++|++++++++.+.+.+.+   .++.+++||++|++++++++++
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~--V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   78 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGAN--VTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINS   78 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHH
Confidence            3589999999999999999999999999997  9999999988887766665443   3689999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec-
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA-  179 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss-  179 (214)
                      +.++++++|++|||||...+.+   ......+.+.++|++.+++|+.++++++|+++|+|++++.       .+|+++| 
T Consensus        79 ~~~~~g~iDilvnnAG~~~~~~---~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g-------~iI~~~Ss  148 (272)
T d1xkqa_          79 TLKQFGKIDVLVNNAGAAIPDA---FGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKG-------EIVNVSSI  148 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCT---TCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------EEEEECCG
T ss_pred             HHHHhCCceEEEeCCcccCccc---ccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCC-------ccccccch
Confidence            9999999999999999875111   1233456778899999999999999999999999987643       5555554 


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+   .++...|+++|+|+.+|+|+| .||
T Consensus       149 ~a~~~~---~~~~~~Y~asKaal~~ltk~lA~el  179 (272)
T d1xkqa_         149 VAGPQA---QPDFLYYAIAKAALDQYTRSTAIDL  179 (272)
T ss_dssp             GGSSSC---CCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccccC---CCCcchhhhHHHHHHHHHHHHHHHh
Confidence            566666   688899999999999999999 444

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=7.3e-36  Score=239.34  Aligned_cols=172  Identities=19%  Similarity=0.248  Sum_probs=146.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |+|+||++|||||++|||+++|++|+++|++  |++++|++++++++   ..+.+.++..+++|++++++++++++++.+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~l~~~---~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAK--VAVLDKSAERLAEL---ETDHGDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHH---HHHHGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHH---HHHcCCCeeEEecccccHHHHHHHHHHHHH
Confidence            5799999999999999999999999999997  99999987665443   334467899999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +++++|++|||||.......  ......+.+.+.|++.+++|+.|+++++|.++|+|++++ |      .||+++|..+.
T Consensus        76 ~~g~idilvnnAG~~~~~~~--~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g------~iI~i~S~~~~  146 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTA--LVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-G------NVIFTISNAGF  146 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCC--GGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEECCGGGT
T ss_pred             HhCCcccccccccccCCCCc--cccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-C------Cceeeeechhc
Confidence            99999999999998642111  112234455567999999999999999999999998764 3      89999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+|+.+|||+| .||
T Consensus       147 ~~---~~~~~~Y~asKaal~~ltr~lA~el  173 (276)
T d1bdba_         147 YP---NGGGPLYTAAKHAIVGLVRELAFEL  173 (276)
T ss_dssp             ST---TSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            87   688899999999999999999 454

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.5e-36  Score=238.26  Aligned_cols=173  Identities=20%  Similarity=0.246  Sum_probs=141.5

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC---CceeEEEecCCCHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +|+||++|||||++|||+++|++|+++|++  |++++|++++++++.+.+...+   .++.+++||++|+++++++++++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~   79 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAK--VTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT   79 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHH
Confidence            589999999999999999999999999997  9999999988877666655433   36899999999999999999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++++|+||||||...+.+   ...++.+.+.|+|++.+++|+.++|+++|.++|+|++++.       .+|+++|..
T Consensus        80 ~~~~g~iDilvnnAG~~~~~~---~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g-------~iI~~~S~~  149 (264)
T d1spxa_          80 LGKFGKLDILVNNAGAAIPDS---QSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKG-------EIVNISSIA  149 (264)
T ss_dssp             HHHHSCCCEEEECCC----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------EEEEECCTT
T ss_pred             HHHhCCCCEeecccccccCCc---cccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccC-------cceeeeeec
Confidence            999999999999999864110   1234567788999999999999999999999999987653       666666655


Q ss_pred             -ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 -GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 -~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                       +..+   .++...|+++|+|+.+|+|+| .||
T Consensus       150 ~~~~~---~~~~~~Y~asKaal~~lt~~lA~el  179 (264)
T d1spxa_         150 SGLHA---TPDFPYYSIAKAAIDQYTRNTAIDL  179 (264)
T ss_dssp             SSSSC---CTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccc---CCCchhhhhhhhhHHHHHHHHHHHh
Confidence             4555   688899999999999999999 444

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.8e-36  Score=234.84  Aligned_cols=164  Identities=21%  Similarity=0.300  Sum_probs=142.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |+|+||++|||||++|||+++|++|+++|++  |++++|++++++++.+.+    .++..++||++|+++++++++    
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~--V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~----   70 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAK--VVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----   70 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHH----
Confidence            5799999999999999999999999999998  999999887655443332    357889999999999876654    


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      +++++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.+.|+|.+++.+     ++|||++|..+.
T Consensus        71 ~~g~iDilVnnAg~~~-------~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~-----g~ii~isS~~~~  138 (242)
T d1cyda_          71 GIGPVDLLVNNAALVI-------MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVP-----GSIVNVSSMVAH  138 (242)
T ss_dssp             TCCCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-----EEEEEECCGGGT
T ss_pred             HcCCCeEEEECCcccc-------chhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhccc-----Ccccccchhhcc
Confidence            5699999999999874       6789999999999999999999999999999987654332     499999999988


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|+++|+|+.+|+|+| .||
T Consensus       139 ~~---~~~~~~Y~asKaal~~lt~~lA~e~  165 (242)
T d1cyda_         139 VT---FPNLITYSSTKGAMTMLTKAMAMEL  165 (242)
T ss_dssp             SC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cc---CCccccccchHHHHHHHHHHHHHHh
Confidence            87   688999999999999999999 444

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-35  Score=233.05  Aligned_cols=164  Identities=21%  Similarity=0.271  Sum_probs=142.4

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ++.|+||++|||||++|||+++|++|+++|++  |++++|++++++++.+..    .++..+++|++|+++++++++   
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~--V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~---   72 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGAR--VVAVSRTQADLDSLVREC----PGIEPVCVDLGDWEATERALG---   72 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT---
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHH---
Confidence            46789999999999999999999999999997  999999887655543332    357889999999999877664   


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcC-CCCCCCCceEEEEeecCc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVG-GTGIERDVAVVANLSARV  181 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~~~~~~~iv~iss~~  181 (214)
                       +++++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|.++ +.      ++||+++|..
T Consensus        73 -~~g~iDilVnnAg~~~-------~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~------g~Ii~isS~~  138 (244)
T d1pr9a_          73 -SVGPVDLLVNNAAVAL-------LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVP------GAIVNVSSQC  138 (244)
T ss_dssp             -TCCCCCEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEEECCGG
T ss_pred             -HhCCceEEEecccccc-------ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCc------ceEeeccccc
Confidence             5699999999999875       6788999999999999999999999999999976543 44      4999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+   .++...|+++|+|+++|+|+| .||
T Consensus       139 ~~~~---~~~~~~Y~asKaal~~lt~~lA~el  167 (244)
T d1pr9a_         139 SQRA---VTNHSVYCSTKGALDMLTKVMALEL  167 (244)
T ss_dssp             GTSC---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccc---ccchhhhhhhHHHHHHHHHHHHHHh
Confidence            9888   688899999999999999999 454

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-35  Score=237.81  Aligned_cols=170  Identities=19%  Similarity=0.252  Sum_probs=149.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh-----cCCCceeEEEecCCCHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-----RFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      -.|+||++|||||++|||+++|++|+++|++  |++++|+.++++...+.+.     ..+.++.+++||++|++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~--Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   85 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSN--VVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   85 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHH
Confidence            5699999999999999999999999999997  9999999887766544332     23568999999999999999999


Q ss_pred             HHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056           99 KSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      +++.+.++++|+||||||...       ..++.+.+.++|++.+++|+.|+|+++|+++|+|++++.+      .||++|
T Consensus        86 ~~~~~~~G~iDiLVnnAg~~~-------~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g------~Ii~~s  152 (297)
T d1yxma1          86 KSTLDTFGKINFLVNNGGGQF-------LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGG------SIVNII  152 (297)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCE------EEEEEC
T ss_pred             HHHHHHhCCeEEEEeeccccc-------cCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccc------cccccc
Confidence            999999999999999999874       6788999999999999999999999999999999988765      899887


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +. +..+   .++...|+++|+|+.+|+|++ .||
T Consensus       153 s~-~~~~---~~~~~~Y~asKaal~~ltk~lA~el  183 (297)
T d1yxma1         153 VP-TKAG---FPLAVHSGAARAGVYNLTKSLALEW  183 (297)
T ss_dssp             CC-CTTC---CTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cc-cccc---ccccccchhHHHHHHHHHHHHHHHh
Confidence            64 3334   578899999999999999999 444

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1e-34  Score=229.89  Aligned_cols=164  Identities=21%  Similarity=0.268  Sum_probs=142.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC-CceeEEEecCC-CHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLT-VESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~-~~~~v~~~~~~~  101 (214)
                      |+|+||++|||||++|||.++|++|+++|++  |++.+|+.++.+.+.++....+ .++.++.+|++ +.++++++++++
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~--vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~   78 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCS--EEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCE--EEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHH
Confidence            5799999999999999999999999999998  8888888777655555544433 48899999998 677899999999


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .++++++|+||||||..               +.+.|++.+++|+.|++++++.++|+|.+++.+   ..++|||++|..
T Consensus        79 ~~~~g~iDilvnnAG~~---------------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~---~~g~Ii~isS~~  140 (254)
T d1sbya1          79 FDQLKTVDILINGAGIL---------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGG---PGGIIANICSVT  140 (254)
T ss_dssp             HHHHSCCCEEEECCCCC---------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCGG
T ss_pred             HHHcCCCCEEEeCCCCC---------------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccC---CCceEEEEechh
Confidence            99999999999999954               246788999999999999999999999776422   225999999999


Q ss_pred             ccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +..+   .+++..|+++|+|+.+|+++|+
T Consensus       141 ~~~~---~~~~~~Y~asKaal~~~t~~la  166 (254)
T d1sbya1         141 GFNA---IHQVPVYSASKAAVVSFTNSLA  166 (254)
T ss_dssp             GTSC---CTTSHHHHHHHHHHHHHHHHHH
T ss_pred             hccC---CCCCHHHHHHHHHHHHHHHHHH
Confidence            9888   6889999999999999999994

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-35  Score=230.77  Aligned_cols=160  Identities=23%  Similarity=0.304  Sum_probs=140.6

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++||++|||||++|||+++|++|+++|++  |++++|+.+++++..+.+.+.  +.++.+++||++|+++++++++++.+
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~--V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAK--VALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD   78 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            47999999999999999999999999997  999999998877755544332  44789999999999999999999999


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                      ++|++|+||||||...               .++|++.+++|+.+++.+++.++|+|.+++.+   ..++|||+||..+.
T Consensus        79 ~~G~iDilVnnAg~~~---------------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~---~~g~Iv~isS~~~~  140 (254)
T d2gdza1          79 HFGRLDILVNNAGVNN---------------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG---EGGIIINMSSLAGL  140 (254)
T ss_dssp             HHSCCCEEEECCCCCC---------------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC---CCEEEEEECCGGGT
T ss_pred             HcCCcCeecccccccc---------------cccchheeeeehhhHHHHHHHHHHHHHHhhcC---CCcEEEeeccHhhc
Confidence            9999999999999763               24578889999999999999999999876432   22599999999998


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHH
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~  208 (214)
                      .+   .+++..|+++|+|+.+|+|+
T Consensus       141 ~~---~~~~~~Y~asKaal~~ltrs  162 (254)
T d2gdza1         141 MP---VAQQPVYCASKHGIVGFTRS  162 (254)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHHH
T ss_pred             cC---CCCccchHHHHHHHHHHHHH
Confidence            88   68889999999999999997

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=9e-35  Score=231.00  Aligned_cols=170  Identities=20%  Similarity=0.251  Sum_probs=149.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee-cCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC-RNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .+|+||++|||||++|||+++|++|+++|++  |++.+ ++++.++.+.+++.+.+.++++++||++|+++++++++++.
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~--Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   79 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGAS--VVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV   79 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHH
Confidence            4699999999999999999999999999998  77655 45544666777778888899999999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++++++|++|||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++        .+++++|..+
T Consensus        80 ~~~g~idilinnag~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g--------~~iii~s~~~  144 (259)
T d1ja9a_          80 SHFGGLDFVMSNSGMEV-------WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGG--------RIILTSSIAA  144 (259)
T ss_dssp             HHHSCEEEEECCCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEE--------EEEEECCGGG
T ss_pred             HHcCCCcEEEecccccc-------ccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCC--------cccccccccc
Confidence            99999999999999874       67888999999999999999999999999999997653        6777777666


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ....  .+++..|+++|+|+.+|+|+| .||
T Consensus       145 ~~~~--~~~~~~Y~asK~al~~l~r~lA~e~  173 (259)
T d1ja9a_         145 VMTG--IPNHALYAGSKAAVEGFCRAFAVDC  173 (259)
T ss_dssp             TCCS--CCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccC--CCCchhHHHHHHHHHHHHHHHHHHH
Confidence            5532  688999999999999999999 554

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=4.2e-34  Score=225.73  Aligned_cols=176  Identities=32%  Similarity=0.474  Sum_probs=148.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHh---cCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH-
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLE---KNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE-  103 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~---~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-  103 (214)
                      .|+||||||++|||+++|++|++   +|++  |++.+|++++++++.++... +.++.+++||++|+++++++++++++ 
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~--V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQH--LFTTCRNREQAKELEDLAKN-HSNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSE--EEEEESCTTSCHHHHHHHHH-CTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHHHHhc-CCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            48999999999999999999974   6776  99999999998877655544 56899999999999999999999865 


Q ss_pred             -HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCC-----CCCCceEEEEe
Q 028056          104 -KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTG-----IERDVAVVANL  177 (214)
Q Consensus       104 -~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-----~~~~~~~iv~i  177 (214)
                       .++++|+||||||+..      +..++.+.+.++|++.+++|+.|++.+++.++|+|+++..+     .....+++||+
T Consensus        79 ~~~~~iDiLvnNAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i  152 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAP------KSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM  152 (248)
T ss_dssp             HGGGCCSEEEECCCCCC------CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred             hhcCCcceEEeeccccc------cCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccc
Confidence             6789999999999865      34567889999999999999999999999999999864210     01122599999


Q ss_pred             ecCcccCCCCCCCCcchhhhhHHHHHHHHHHhc-cc
Q 028056          178 SARVGSIGDNRLGGWHSYRASKAALNQCKILAM-DF  212 (214)
Q Consensus       178 ss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la-~~  212 (214)
                      +|..+.....+.+++..|++||+|+.+|+++++ ||
T Consensus       153 ~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~  188 (248)
T d1snya_         153 SSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDL  188 (248)
T ss_dssp             CCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHh
Confidence            999988766567788899999999999999994 44

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.1e-34  Score=228.88  Aligned_cols=175  Identities=19%  Similarity=0.165  Sum_probs=150.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHh---cCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLE---KNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~---~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      ..|+||+++||||++|||+++|++|++   +|++  |++++|++++++++.+.+...  +.++.+++||+++++++++++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~--Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~   79 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSV--MLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLL   79 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCE--EEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCE--EEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHH
Confidence            468999999999999999999999986   6886  999999998888766655432  447899999999999999999


Q ss_pred             HHHHHH----cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEE
Q 028056           99 KSIKEK----YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVV  174 (214)
Q Consensus        99 ~~~~~~----~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~i  174 (214)
                      +++.+.    ++.+|++|||||...+.    +..++.+.+.++|++.+++|+.++++++|.++|+|++++.    ..++|
T Consensus        80 ~~~~~~~~~~~~~~~~lvnnag~~~~~----~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~----~~g~I  151 (259)
T d1oaaa_          80 SAVRELPRPEGLQRLLLINNAATLGDV----SKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG----LSKTV  151 (259)
T ss_dssp             HHHHHSCCCTTCCEEEEEECCCCCCCC----SSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT----CEEEE
T ss_pred             HHHHHhhhhccCceEEEEecccccccC----CCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCC----Ccccc
Confidence            998773    46789999999986421    3567889999999999999999999999999999987652    12599


Q ss_pred             EEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          175 ANLSARVGSIGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       175 v~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      ||+||..+..+   .+++..|+++|+|+.+|+++|+.
T Consensus       152 v~isS~~~~~~---~~~~~~Y~asKaal~~lt~~la~  185 (259)
T d1oaaa_         152 VNISSLCALQP---YKGWGLYCAGKAARDMLYQVLAA  185 (259)
T ss_dssp             EEECCGGGTSC---CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccCC---CccchHHHHHHHHHHHHHHHHHh
Confidence            99999999888   68899999999999999999953

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=7.3e-34  Score=227.23  Aligned_cols=172  Identities=23%  Similarity=0.337  Sum_probs=152.1

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-CcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .+.+|+||++|||||++|||+++|++|+++|++  |++++++.+ .++++.+.+.+.+.++.+++||++|++++++++++
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~--Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~   89 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCK--VIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEE   89 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHH
Confidence            457799999999999999999999999999998  888887754 45556667777788999999999999999999999


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      +.+.++++|++|||+|...       ..++.+.+.++|++.+++|+.+++.++|.+.|+|++++        ++++++|.
T Consensus        90 ~~~~~g~idilV~nag~~~-------~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g--------~~i~i~s~  154 (272)
T d1g0oa_          90 AVKIFGKLDIVCSNSGVVS-------FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGG--------RLILMGSI  154 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCC-------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTC--------EEEEECCG
T ss_pred             HHHHhCCCCccccccccch-------hhhhhhhhhhHHHHHhhhccceeeeecccccccccccc--------cccccccc
Confidence            9999999999999999875       67789999999999999999999999999999998754        88888888


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+....  .+++..|+++|+|+++|+|++ .||
T Consensus       155 ~~~~~~--~~~~~~Y~asKaal~~ltk~lA~e~  185 (272)
T d1g0oa_         155 TGQAKA--VPKHAVYSGSKGAIETFARCMAIDM  185 (272)
T ss_dssp             GGTCSS--CSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccc--ccchhhHHHHHHHHHHHHHHHHHHh
Confidence            765542  577889999999999999999 554

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.1e-34  Score=227.03  Aligned_cols=160  Identities=13%  Similarity=0.129  Sum_probs=143.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      |+|||||++|||+++|++|+++|++  |++.+|+.+.+++++....      .+.++|++|+++++++++++.+++|++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~--V~i~~r~~~~~~~~~~~~~------~~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHT--VACHDESFKQKDELEAFAE------TYPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCE--EEECCGGGGSHHHHHHHHH------HCTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHhhhC------cEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999997  9999998877666544332      2346899999999999999999999999


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCC
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRL  189 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~  189 (214)
                      +||||||+..      +..++.+.+.++|++.+++|+.++|+++|+++|+|++++.|      +|||+||..+..+   .
T Consensus        74 iLVnNAg~~~------~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G------~IV~isS~~~~~~---~  138 (252)
T d1zmta1          74 VLVSNDIFAP------EFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSG------HIIFITSATPFGP---W  138 (252)
T ss_dssp             EEEEECCCCC------CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC------EEEEECCSTTTSC---C
T ss_pred             EEEECCcCCC------CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccc------eeecccccccccc---c
Confidence            9999999764      35788999999999999999999999999999999988776      9999999999887   6


Q ss_pred             CCcchhhhhHHHHHHHHHHh-ccc
Q 028056          190 GGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       190 ~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ++...|+++|+|+.+|+|+| .||
T Consensus       139 ~~~~~Y~asKaal~~lt~~lA~el  162 (252)
T d1zmta1         139 KELSTYTSARAGACTLANALSKEL  162 (252)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccHHHHHHHHHHHh
Confidence            88899999999999999999 444

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=2.8e-34  Score=225.80  Aligned_cols=165  Identities=19%  Similarity=0.240  Sum_probs=140.6

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .|+||++|||||++|||+++|++|+++|++  |++.+|+.+++   ++...+.+.++.+++||++++++++++++++.++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~--V~~~~r~~~~~---~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGAS--LVAVDREERLL---AEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCHHHH---HHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCHHHH---HHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999997  99999988654   4445556788999999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|++|||||...       ..++.+.+.++|++.+++|+.+++.++|.+.|+|++++        .++++|+.... 
T Consensus        77 ~g~iDiLinnAg~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~--------~i~~~ss~a~~-  140 (241)
T d2a4ka1          77 FGRLHGVAHFAGVAH-------SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGG--------SLVLTGSVAGL-  140 (241)
T ss_dssp             HSCCCEEEEGGGGTT-------TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTC--------EEEEECCCTTC-
T ss_pred             hCCccEecccccccc-------ccchhhhhcccccccccccccccccccccccccccccc--------ceeeccccccc-
Confidence            999999999999874       57888999999999999999999999999999987653        66666665443 


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-cccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDFE  213 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~~  213 (214)
                      +   .+++..|+++|+|+++|+|+| .||.
T Consensus       141 ~---~~~~~~Y~~sK~al~~lt~~lA~el~  167 (241)
T d2a4ka1         141 G---AFGLAHYAAGKLGVVGLARTLALELA  167 (241)
T ss_dssp             C---HHHHHHHHHCSSHHHHHHHHHHHHHT
T ss_pred             c---ccCccccchhhHHHHHHHHHHHHHHh
Confidence            3   477899999999999999999 5543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.7e-34  Score=224.87  Aligned_cols=174  Identities=21%  Similarity=0.280  Sum_probs=147.6

Q ss_pred             ccccccCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~--giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      ..++|+||++|||||+|  |||+++|++|+++|++  |++.+|++...+..++... ...+..++++|++|+++++++++
T Consensus         2 ~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~--V~i~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~   78 (256)
T d1ulua_           2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAE--VALSYQAERLRPEAEKLAE-ALGGALLFRADVTQDEELDALFA   78 (256)
T ss_dssp             EEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHH-HTTCCEEEECCTTCHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCE--EEEEeCcHHHHHHHHHhhh-ccCcccccccccCCHHHHHHHHH
Confidence            35789999999999987  9999999999999998  8899988654444444433 34567889999999999999999


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      ++.++++++|++|||||.....   ....++.+.+.++|++.+++|+.+++.++|.+.|+|+++        ++|||+||
T Consensus        79 ~~~~~~g~iDilVnnag~~~~~---~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--------G~Iv~isS  147 (256)
T d1ulua_          79 GVKEAFGGLDYLVHAIAFAPRE---AMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--------GGIVTLTY  147 (256)
T ss_dssp             HHHHHHSSEEEEEECCCCCCHH---HHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--------EEEEEEEC
T ss_pred             HHHHhcCCceEEEecccccccc---ccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC--------CEEEEEee
Confidence            9999999999999999986310   013456788889999999999999999999999998764        39999999


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+..+   .+++..|+++|+|+++|+|++ .||
T Consensus       148 ~~~~~~---~~~~~~Y~asKaal~~ltr~lA~el  178 (256)
T d1ulua_         148 YASEKV---VPKYNVMAIAKAALEASVRYLAYEL  178 (256)
T ss_dssp             GGGTSB---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHhcCC---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            999887   688999999999999999999 444

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-33  Score=224.24  Aligned_cols=168  Identities=21%  Similarity=0.223  Sum_probs=151.6

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccch-hhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL-KNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      |+||++||||||+|||+++|++|+++|++  |++++|++++++++.+. ....+..+..+.+|+++.+.+...++++.+.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~--Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAH--VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            89999999999999999999999999997  99999999888875444 3445678889999999999999999999999


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++.+|+++||||...       ..++.+.+.++|++.+++|+.|++.+++.++|+|++++ |      .||++||..+..
T Consensus        90 ~g~~~~li~nag~~~-------~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~-G------~ii~isS~~~~~  155 (269)
T d1xu9a_          90 MGGLDMLILNHITNT-------SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-G------SIVVVSSLAGKV  155 (269)
T ss_dssp             HTSCSEEEECCCCCC-------CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C------EEEEEEEGGGTS
T ss_pred             hCCcccccccccccc-------ccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC-C------cceEeccchhcC
Confidence            999999999999875       56677889999999999999999999999999997643 4      999999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhc-cc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAM-DF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la-~~  212 (214)
                      +   .++...|++||+|+++|+++|+ ||
T Consensus       156 ~---~p~~~~Y~asKaal~~~~~~La~El  181 (269)
T d1xu9a_         156 A---YPMVAAYSASKFALDGFFSSIRKEY  181 (269)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            8   6899999999999999999994 54

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-33  Score=226.04  Aligned_cols=167  Identities=27%  Similarity=0.344  Sum_probs=141.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcE-EEEeecCCCCcccccc---hhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGC-VIATCRNPNGATGLLD---LKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~-vi~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .|++|||||++|||+++|++|+++|++.. |....|+.+..+.+.+   .+...+.++..++||++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            47899999999999999999999999822 3344555444433333   3334466899999999999999999988754


Q ss_pred             HcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCccc
Q 028056          104 KYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGS  183 (214)
Q Consensus       104 ~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~  183 (214)
                        +.+|++|||+|...       ..++.+.+.++|++.+++|+.|+++++|+++|+|++++.|      +|||+||..+.
T Consensus        82 --g~idilvnnag~~~-------~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G------~Iv~isS~~g~  146 (285)
T d1jtva_          82 --GRVDVLVCNAGLGL-------LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG------RVLVTGSVGGL  146 (285)
T ss_dssp             --SCCSEEEECCCCCC-------CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEEEEGGGT
T ss_pred             --cchhhhhhcccccc-------cccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCC------ceEEEechhhc
Confidence              78999999999875       6778899999999999999999999999999999988766      99999999999


Q ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          184 IGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       184 ~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .+   .++...|++||+|+.+|+++| .|+
T Consensus       147 ~~---~~~~~~Y~asKaal~~l~~~la~El  173 (285)
T d1jtva_         147 MG---LPFNDVYCASKFALEGLCESLAVLL  173 (285)
T ss_dssp             SC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            88   688999999999999999999 444

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-34  Score=228.48  Aligned_cols=165  Identities=21%  Similarity=0.248  Sum_probs=142.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +++|||||++|||+++|++|+++ |++  |++.+|++++++++.+.+.+.+.++.+++||++|.++++++++++.+++++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGD--VVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSE--EEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCE--EEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            56699999999999999999987 675  999999999988877777777788999999999999999999999999999


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC-
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-  186 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-  186 (214)
                      +|+||||||+..       ..+..+.+.++|++.+++|+.|++++++.++|+|+++        ++|||++|+.+..+. 
T Consensus        82 iDiLVnNAGi~~-------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--------g~ivnisS~~~~~~~~  146 (275)
T d1wmaa1          82 LDVLVNNAGIAF-------KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--------GRVVNVSSIMSVRALK  146 (275)
T ss_dssp             EEEEEECCCCCC-------CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEECCHHHHHHHH
T ss_pred             cEEEEEcCCcCC-------CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------CCcccccccceecccc
Confidence            999999999875       3455667788999999999999999999999999764        399999998664321 


Q ss_pred             -------------------------------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 -------------------------------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 -------------------------------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                                                           .+..+...|++||+++.+|++.++
T Consensus       147 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la  207 (275)
T d1wmaa1         147 SCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHA  207 (275)
T ss_dssp             TSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHH
Confidence                                                 012234679999999999999883

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.98  E-value=1.5e-32  Score=221.67  Aligned_cols=185  Identities=12%  Similarity=0.167  Sum_probs=159.2

Q ss_pred             cccccccccccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc-cchhhcCCCceeEEEecCC
Q 028056           11 IRKVAFTSSASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLT   89 (214)
Q Consensus        11 ~~~~~~~~~~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~   89 (214)
                      ........++.++.+|+||++|||||++|||+++|++|+++|++  |++.+|+.+++++. +++..+.+.++.+++||++
T Consensus         8 ~~~~~~~~~~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~--Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~   85 (294)
T d1w6ua_           8 KFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQ--CVIASRKMDVLKATAEQISSQTGNKVHAIQCDVR   85 (294)
T ss_dssp             HHSCCCCSCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT
T ss_pred             hhcCcccccCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEECCHHHHHHHHHHHHHhcCCceEEEEeccc
Confidence            33444455667778999999999999999999999999999997  99999998887764 4445556778999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCC
Q 028056           90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIER  169 (214)
Q Consensus        90 ~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~  169 (214)
                      ++++++++++.+.+.++++|++|||||...       ..++.+.+.+++++.+.+|+.+.+.+.+...+.+.....+   
T Consensus        86 ~~~~v~~~~~~~~~~~g~iDilvnnAg~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---  155 (294)
T d1w6ua_          86 DPDMVQNTVSELIKVAGHPNIVINNAAGNF-------ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKG---  155 (294)
T ss_dssp             CHHHHHHHHHHHHHHTCSCSEEEECCCCCC-------CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC---
T ss_pred             ChHHHHHHhhhhhhhccccchhhhhhhhcc-------ccccccchhhhhhhheeeecccchhhhhhhhccccccccc---
Confidence            999999999999999999999999999875       5678889999999999999999999999988877665444   


Q ss_pred             CceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          170 DVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       170 ~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                        +.++++++..+..+   .++...|+++|+|+++|+|++ .||
T Consensus       156 --~~i~~~ss~~~~~~---~~~~~~YsasKaal~~ltk~lA~el  194 (294)
T d1w6ua_         156 --AAFLSITTIYAETG---SGFVVPSASAKAGVEAMSKSLAAEW  194 (294)
T ss_dssp             --EEEEEECCTHHHHC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --ccccccccchhhhc---ccccchHHHHHHHHHHHHHHHHHHH
Confidence              48888888887777   578889999999999999999 444

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.98  E-value=2.5e-32  Score=215.69  Aligned_cols=178  Identities=31%  Similarity=0.424  Sum_probs=143.8

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      |+.|+||||||++|||+++|++|+++|+..+|++.+|+.++++++.+   ..+.++.+++||++|+++++++++++.+.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            34599999999999999999999999985568999999877655433   345689999999999999999999999876


Q ss_pred             C--CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCC-----CCCceEEEEee
Q 028056          106 G--SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGI-----ERDVAVVANLS  178 (214)
Q Consensus       106 ~--~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-----~~~~~~iv~is  178 (214)
                      +  ++|+||||||...      +..++.+.+.++|++.+++|+.|++++++.++|+|++++.+.     ....+.+++++
T Consensus        78 ~~~~idilinnAG~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s  151 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLL------SYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITIS  151 (250)
T ss_dssp             GGGCCCEEEECCCCCC------CBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEEC
T ss_pred             CCCCeEEEEEcCcccC------CCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccc
Confidence            5  4999999999865      346677889999999999999999999999999997643211     11225899999


Q ss_pred             cCcccCCCC----CCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          179 ARVGSIGDN----RLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       179 s~~~~~~~~----~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +..+.....    +..+...|++||+|+.+|+++| .||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el  190 (250)
T d1yo6a1         152 SGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDL  190 (250)
T ss_dssp             CGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHh
Confidence            876654321    2334567999999999999999 444

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.98  E-value=1.3e-32  Score=215.41  Aligned_cols=154  Identities=18%  Similarity=0.187  Sum_probs=133.6

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      |+||++|||||++|||+++|++|+++|++  |++.+|+++.+++         ....++.||+++.      ++.+.+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~--V~~~~r~~~~l~~---------~~~~~~~~Dv~~~------~~~~~~~~   64 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAE--VTICARNEELLKR---------SGHRYVVCDLRKD------LDLLFEKV   64 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCE--EEEEESCHHHHHH---------TCSEEEECCTTTC------HHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHh---------cCCcEEEcchHHH------HHHHHHHh
Confidence            78999999999999999999999999997  9999998644322         1234678999864      44566677


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|+||||||...       ..++.+.+.++|++.+++|+.++++++|.++|+|++++.|      +||+++|..+..+
T Consensus        65 g~iD~lVnnAG~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G------~ii~i~S~~~~~~  131 (234)
T d1o5ia_          65 KEVDILVLNAGGPK-------AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWG------RIVAITSFSVISP  131 (234)
T ss_dssp             CCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCGGGTSC
T ss_pred             CCCcEEEecccccC-------CcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccc------ccccccccccccc
Confidence            99999999999764       6788999999999999999999999999999999988766      9999999988877


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                         .++...|+++|+|+.+|+|++ .||
T Consensus       132 ---~~~~~~Y~asKaal~~ltk~lA~el  156 (234)
T d1o5ia_         132 ---IENLYTSNSARMALTGFLKTLSFEV  156 (234)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---ccccccchhHHHHHHHHHHHHHHHh
Confidence               688899999999999999999 444

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.4e-31  Score=209.39  Aligned_cols=162  Identities=24%  Similarity=0.302  Sum_probs=138.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +|+||++|||||++|||+++|++|+++|++  |++++|++++++++.+     ...+....+|+.+.+.++..    .+.
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~--Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~----~~~   71 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAK--VIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQF----ANE   71 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHH----HHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHh-----ccCCceeeeecccccccccc----ccc
Confidence            489999999999999999999999999997  9999999876555433     23577888899887765544    455


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ++++|+||||+|...       ..++.+.+.++|++.+++|+.+++.++|.+.|+|.+++.|      +||+++|..+..
T Consensus        72 ~~~id~lVn~ag~~~-------~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g------~Ii~isS~~~~~  138 (245)
T d2ag5a1          72 VERLDVLFNVAGFVH-------HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG------NIINMSSVASSV  138 (245)
T ss_dssp             CSCCSEEEECCCCCC-------CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE------EEEEECCSBTTT
T ss_pred             cccceeEEecccccC-------CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCc------eeeeeechhhcc
Confidence            689999999999875       5778899999999999999999999999999999988766      999999987753


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      .  +.+++..|+++|+|+++|+|+| .||
T Consensus       139 ~--~~~~~~~Y~~sKaal~~l~r~lA~e~  165 (245)
T d2ag5a1         139 K--GVVNRCVYSTTKAAVIGLTKSVAADF  165 (245)
T ss_dssp             B--CCTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C--CccchhHHHHHHHHHHHHHHHHHHHh
Confidence            2  1678899999999999999999 554

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-30  Score=205.90  Aligned_cols=179  Identities=18%  Similarity=0.249  Sum_probs=151.6

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +||||++|||||++|||+++|++|+++|++  |++.+|+++.++...+   +.+.+...+.+|+.+.+.++..++++...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGAS--AVLLDLPNSGGEAQAK---KLGNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECTTSSHHHHHH---HHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHH---HhCCCcccccccccccccccccccccccc
Confidence            689999999999999999999999999997  9999999987665443   33567889999999999999999999998


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                      ...+|.+++|++....... ....++.+.+.++|++.+++|+.++|+++|++.|+|..+........|+|||+||..+..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~  155 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKT-YNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  155 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCS-EETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             cccccccccccccccCCCc-ccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc
Confidence            8999999999987642111 123456778889999999999999999999999998766433333446999999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +   .+++..|+++|+|+++|+|+| .||
T Consensus       156 ~---~~~~~~Y~asKaal~~lt~~la~e~  181 (248)
T d2o23a1         156 G---QVGQAAYSASKGGIVGMTLPIARDL  181 (248)
T ss_dssp             C---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C---CCCchHHHHHHHHHHHHHHHHHHHh
Confidence            7   688999999999999999999 554

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=8.7e-30  Score=199.40  Aligned_cols=158  Identities=13%  Similarity=0.090  Sum_probs=133.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  105 (214)
                      +||++|||||++|||+++|++|+++|++  |+++++++....          .....+.+|.++.++++.+.+++.+.+ 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~--V~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWW--VASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCE--EEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEeCCccccc----------cccceeecccCcHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999999997  888888765321          233456678888888888888887754 


Q ss_pred             -CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          106 -GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       106 -~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                       +++|+||||||...      +..+..+.+.++|++.+++|+.+++++++.++|+|+++        ++|||+||..+..
T Consensus        69 ~~~iD~lInnAG~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--------G~Iv~isS~~~~~  134 (236)
T d1dhra_          69 DQKVDAILCVAGGWA------GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--------GLLTLAGAKAALD  134 (236)
T ss_dssp             TCCEEEEEECCCCCC------CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCGGGGS
T ss_pred             CCCceEEEECCcccc------cccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc--------cceeEEccHHHcC
Confidence             47999999999754      24556677789999999999999999999999999763        3999999999988


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHh-cccc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILA-MDFE  213 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~l-a~~~  213 (214)
                      +   .+++..|++||+|+.+|+++| .||+
T Consensus       135 ~---~~~~~~Y~asKaal~~lt~~la~El~  161 (236)
T d1dhra_         135 G---TPGMIGYGMAKGAVHQLCQSLAGKNS  161 (236)
T ss_dssp             C---CTTBHHHHHHHHHHHHHHHHHTSTTS
T ss_pred             C---ccCCcccHHHHHHHHHHHHHHHHHhc
Confidence            7   688999999999999999999 5553

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.96  E-value=2.8e-29  Score=196.31  Aligned_cols=157  Identities=11%  Similarity=0.052  Sum_probs=129.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH--Hc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE--KY  105 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~  105 (214)
                      +++||||||++|||+++|++|+++|++  |++++|+++...          .....+.+|+.+.+......+.+..  ++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~--V~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYT--VLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEE--EEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCchhcc----------cccceeccccCchhHHHHHHHHHHHHhcC
Confidence            356799999999999999999999997  999999876422          1233455678777777777766666  46


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      +++|+||||||...      ...+..+.+.+.|+..+++|+.++++++|.++|+|+++        ++|||+||..+..+
T Consensus        70 g~iD~linnAG~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--------g~Iv~isS~~~~~~  135 (235)
T d1ooea_          70 SQVDGVFCVAGGWA------GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--------GLLQLTGAAAAMGP  135 (235)
T ss_dssp             CCEEEEEECCCCCC------CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--------EEEEEECCGGGGSC
T ss_pred             CCeeEEEECCcccc------cccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--------eEEEEeccHHhcCC
Confidence            89999999999764      23445566678899999999999999999999999764        39999999999888


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHh-cccc
Q 028056          186 DNRLGGWHSYRASKAALNQCKILA-MDFE  213 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~l-a~~~  213 (214)
                         .+++..|+++|+|+++|+++| .||+
T Consensus       136 ---~~~~~~Y~asKaal~~l~~~la~e~~  161 (235)
T d1ooea_         136 ---TPSMIGYGMAKAAVHHLTSSLAAKDS  161 (235)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHSTTS
T ss_pred             ---cccccchHHHHHHHHHHHHHHHHHhc
Confidence               688999999999999999999 5664

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.95  E-value=1.5e-28  Score=194.66  Aligned_cols=162  Identities=17%  Similarity=0.208  Sum_probs=138.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc---cccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT---GLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++|+|||||++|||+++|++|+++|++ +|++++|+....+   ++.+.+...+.++.++.||++|.++++++++++.+.
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~-~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            579999999999999999999999997 6899999754433   334444556788999999999999999999988665


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                       +++|++|||+|...       ..++.+.+.++|++.+++|+.+.+++.+.+.    ..+.+      .||++||+.+..
T Consensus        88 -~~i~~vv~~ag~~~-------~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~----~~~~~------~iv~~SS~a~~~  149 (259)
T d2fr1a1          88 -VPLSAVFHAAATLD-------DGTVDTLTGERIERASRAKVLGARNLHELTR----ELDLT------AFVLFSSFASAF  149 (259)
T ss_dssp             -SCEEEEEECCCCCC-------CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSCCS------EEEEEEEHHHHT
T ss_pred             -cccccccccccccc-------ccccccccHHHHHHHhhhhccchhHHHHHhh----ccCCc------eEeeecchhhcc
Confidence             58999999999875       6788999999999999999999999888643    33444      999999999999


Q ss_pred             CCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          185 GDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       185 ~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      +   .+++..|+++|+++++|++.++.
T Consensus       150 g---~~~~~~YaAaka~l~~la~~~~~  173 (259)
T d2fr1a1         150 G---APGLGGYAPGNAYLDGLAQQRRS  173 (259)
T ss_dssp             C---CTTCTTTHHHHHHHHHHHHHHHH
T ss_pred             C---CcccHHHHHHHHhHHHHHHHHHh
Confidence            8   68899999999999999998854

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.95  E-value=4.2e-28  Score=194.19  Aligned_cols=172  Identities=19%  Similarity=0.223  Sum_probs=129.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-Ccccccchhh-cCCCceeE-----------------EEecCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKN-RFPERLDV-----------------LQLDLT   89 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~-~~~~~~~~~~-~~~~~~~~-----------------~~~Dl~   89 (214)
                      +++|||||++|||+++|++|+++|++  |++.+++.+ ..+.+.+.+. ..+.....                 ..+|++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~--V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~   80 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYA--VCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT   80 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCE--EEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCC
Confidence            58999999999999999999999998  777666543 3333333332 23333433                 456699


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccH--------------hhhhhheeeechhHHHHHHH
Q 028056           90 VESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEK--------------SSLMLAYEVNAVGPILVIKH  155 (214)
Q Consensus        90 ~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~n~~~~~~l~~~  155 (214)
                      ++++++++++++.+++|++|+||||||...       ..++.+.+.              +.+...+.+|+.++++++|.
T Consensus        81 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  153 (284)
T d1e7wa_          81 LFTRCAELVAACYTHWGRCDVLVNNASSFY-------PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  153 (284)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCC-------CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEecCCccC-------CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeecc
Confidence            999999999999999999999999999875       233333333              34455789999999999999


Q ss_pred             HhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          156 MSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       156 ~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+.+...+.......++|+++++.....+   .+++..|+++|+|+.+|+|+| .||
T Consensus       154 ~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~---~~~~~~Y~asKaal~~lt~~lA~el  208 (284)
T d1e7wa_         154 FAHRVAGTPAKHRGTNYSIINMVDAMTNQP---LLGYTIYTMAKGALEGLTRSAALEL  208 (284)
T ss_dssp             HHHHHHTSCGGGSCSCEEEEEECCTTTTSC---CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhhHHHhcCCCCcccccccccccCC---ccceeeeccccccchhhhHHHHHHh
Confidence            988765433222223369999999888777   688899999999999999999 454

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=9.9e-27  Score=183.89  Aligned_cols=172  Identities=15%  Similarity=0.184  Sum_probs=143.4

Q ss_pred             cccCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~--giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .|+||++|||||++  |||.++|+.|+++|++  |++.+|+++..+.+.+.... ..+...+++|+++..++.+.++++.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~--V~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   78 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAE--LAFTYQNDKLKGRVEEFAAQ-LGSDIVLQCDVAEDASIDTMFAELG   78 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE--EEEEESSTTTHHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCE--EEEEeCCHHHHHHHHHHHhh-cCCcceeecccchHHHHHHHHHHhh
Confidence            47999999999998  8999999999999998  99999987654445444433 4567888999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||++.......  +.....+...+.|...+.+|+.+.+.+++.+.+.+.+.        +.|+++||..+
T Consensus        79 ~~~~~~d~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~Ii~iss~~~  148 (258)
T d1qsga_          79 KVWPKFDGFVHSIGFAPGDQL--DGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--------SALLTLSYLGA  148 (258)
T ss_dssp             TTCSSEEEEEECCCCCCGGGG--SSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--------EEEEEEECGGG
T ss_pred             hcccccceEEEeecccccccc--cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC--------cEEEEecchhh
Confidence            999999999999988642111  12334567778899999999999999999999998653        38999999888


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      ..+   .+.+..|+++|+|+++|+|++ .||
T Consensus       149 ~~~---~~~~~~Y~~sKaal~~ltr~lA~el  176 (258)
T d1qsga_         149 ERA---IPNYNVMGLAKASLEANVRYMANAM  176 (258)
T ss_dssp             TSB---CTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccC---CCCcHHHHHHHHHHHHHHHHHHHHh
Confidence            777   678899999999999999999 444

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.93  E-value=2.8e-26  Score=187.56  Aligned_cols=168  Identities=20%  Similarity=0.249  Sum_probs=131.0

Q ss_pred             cCcEEEEec--CCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc------------ccchhhcCCCceeE---------
Q 028056           27 KGGVSLVQG--ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG------------LLDLKNRFPERLDV---------   83 (214)
Q Consensus        27 ~~k~vlItG--~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~------------~~~~~~~~~~~~~~---------   83 (214)
                      ++|++||||  +++|||+++|++|+++|++  |++.+++......            ......+.......         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~--V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK--IIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDT   78 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCE--EEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSS
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCE--EEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehh
Confidence            479999999  6689999999999999998  8888765432110            00000000111111         


Q ss_pred             -----------EEecCCCHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHH
Q 028056           84 -----------LQLDLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILV  152 (214)
Q Consensus        84 -----------~~~Dl~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  152 (214)
                                 ..+|+++.++++++++++.+.++++|++|||+|....     ...++.+.+.++|++.+++|+.+++.+
T Consensus        79 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~-----~~~~~~~~~~~~~~~~~~vn~~~~~~~  153 (329)
T d1uh5a_          79 ANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKE-----VQKDLLNTSRKGYLDALSKSSYSLISL  153 (329)
T ss_dssp             GGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             hcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccc-----cCCChhhhhhhhhhhhcccchhHHHHH
Confidence                       2357788899999999999999999999999997641     135778899999999999999999999


Q ss_pred             HHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCC-cchhhhhHHHHHHHHHHh-ccc
Q 028056          153 IKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGG-WHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       153 ~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~-~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +|+++|+|++.        ++||++||..+..+   .|+ ...|+++|+|+++|+|+| .||
T Consensus       154 ~k~~~~~m~~~--------GsIv~iss~~~~~~---~p~y~~~y~asKaal~~ltr~lA~El  204 (329)
T d1uh5a_         154 CKYFVNIMKPQ--------SSIISLTYHASQKV---VPGYGGGMSSAKAALESDTRVLAYHL  204 (329)
T ss_dssp             HHHHGGGEEEE--------EEEEEEECGGGTSC---CTTCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhcccc--------cccccceeehhccc---ccccchhhhhhhccccccchhhHHHH
Confidence            99999999764        39999999888777   454 567999999999999999 444

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.92  E-value=2.1e-25  Score=179.52  Aligned_cols=174  Identities=16%  Similarity=0.202  Sum_probs=129.6

Q ss_pred             ccccccCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCccc---------ccchhhcCCC--ce-eEEEe-
Q 028056           22 ASVKWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATG---------LLDLKNRFPE--RL-DVLQL-   86 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~--giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~---------~~~~~~~~~~--~~-~~~~~-   86 (214)
                      .+++|+||++|||||++  |||+++|++|+++|++  |++.+|++.....         ..+.......  .. ....+ 
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~--Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAE--ILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLD   79 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCE--EEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEEC
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCE--EEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            35889999999999876  9999999999999998  8888886421100         0000000000  00 11122 


Q ss_pred             -------------------cCCCHHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeech
Q 028056           87 -------------------DLTVESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAV  147 (214)
Q Consensus        87 -------------------Dl~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~  147 (214)
                                         |.++..+++++++++.++++++|+||||||....     ...++.+.+.++|++.+++|+.
T Consensus        80 ~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~-----~~~~~~~~~~~~~~~~~~vn~~  154 (297)
T d1d7oa_          80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPE-----VSKPLLETSRKGYLAAISASSY  154 (297)
T ss_dssp             TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTT-----TTSCGGGCCHHHHHHHHHHHTH
T ss_pred             hhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccc-----cccchhhhhcccccccccchhh
Confidence                               2356667789999999999999999999997531     2467889999999999999999


Q ss_pred             hHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          148 GPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       148 ~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                      +.+.+++++.+.+.+++        .++++++.......  .+....|+++|+++.++++.+ ++|
T Consensus       155 ~~~~~~~~~~~~~~~~g--------~~~~~~~~~~~~~~--~~~~~~y~~aKaa~~~l~~~~a~e~  210 (297)
T d1d7oa_         155 SFVSLLSHFLPIMNPGG--------ASISLTYIASERII--PGYGGGMSSAKAALESDTRVLAFEA  210 (297)
T ss_dssp             HHHHHHHHHGGGEEEEE--------EEEEEECGGGTSCC--TTCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhHHHHHhhcCC--------cceeeeehhhcccc--cccccceecccccccccccccchhc
Confidence            99999999999887754        56666666554442  466779999999999999988 443

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=7e-25  Score=171.20  Aligned_cols=164  Identities=21%  Similarity=0.216  Sum_probs=131.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|++|||||++|||+++|++|+++|++  |++.+|+++.            .+...+++|+++......+..+..+.. .
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~--V~i~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYR--VVVLDLRREG------------EDLIYVEGDVTREEDVRRAVARAQEEA-P   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCE--EEEEESSCCS------------SSSEEEECCTTCHHHHHHHHHHHHHHS-C
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCccc------------ccceEeeccccchhhhHHHHHhhhccc-c
Confidence            599999999999999999999999997  9999998754            235678899999999999988887764 4


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      .+.++++++.....   ...........+.|++.+++|+.+.+.+++.+.+.+.....-.+...++|||+||..+..+  
T Consensus        66 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~--  140 (241)
T d1uaya_          66 LFAVVSAAGVGLAE---KILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG--  140 (241)
T ss_dssp             EEEEEECCCCCCCC---CSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC--
T ss_pred             ccchhhhhhccccc---cccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC--
Confidence            55566666554311   1234455677888999999999999999999999865543333333469999999999888  


Q ss_pred             CCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          188 RLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       188 ~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                       .+++..|+++|+|+++|+|+| .||
T Consensus       141 -~~~~~~Y~asKaal~~lt~~lA~el  165 (241)
T d1uaya_         141 -QIGQAAYAASKGGVVALTLPAAREL  165 (241)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCchhhHHHHHHHHHHHHHHHHHH
Confidence             688999999999999999999 444

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.92  E-value=3.8e-25  Score=176.14  Aligned_cols=169  Identities=21%  Similarity=0.244  Sum_probs=121.4

Q ss_pred             cccCcEEEEecCCC--chhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASR--GIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~--giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .|+||++|||||+|  |||.++|++|+++|++  |++++|++...+.+.++.. .+....++.+|++++++++++++++.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~--V~i~~r~~~~~~~~~~l~~-~~~~~~~~~~d~~~~~~~~~~~~~~~   78 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGAT--LAFTYLNESLEKRVRPIAQ-ELNSPYVYELDVSKEEHFKSLYNSVK   78 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCE--EEEEESSTTTHHHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHHh-hCCceeEeeecccchhhHHHHHHHHH
Confidence            48999999999765  9999999999999998  9999998654333444433 45678889999999999999999999


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      +.++++|++|||+|....+.   ......+...+.+...+.++..+.+.+.+...+.+..   +     ..|+++++...
T Consensus        79 ~~~g~id~lV~nag~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~i~~~s~~~~  147 (274)
T d2pd4a1          79 KDLGSLDFIVHSVAFAPKEA---LEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---G-----ASVLTLSYLGS  147 (274)
T ss_dssp             HHTSCEEEEEECCCCCCGGG---GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---E-----EEEEEEECGGG
T ss_pred             HHcCCCCeEEeecccccccc---cccccccccchhhhhhhcccccccccccccccccccc---C-----cceeeeccccc
Confidence            99999999999999865111   1122233333344444444444444444444433222   2     25666666555


Q ss_pred             cCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 SIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+   .+.+..|+++|+|+++++|+++
T Consensus       148 ~~~---~~~~~~y~asK~al~~ltr~lA  172 (274)
T d2pd4a1         148 TKY---MAHYNVMGLAKAALESAVRYLA  172 (274)
T ss_dssp             TSB---CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             ccc---cccchhhhHHHHHHHHHHHhhH
Confidence            544   6778899999999999999983

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.91  E-value=1.9e-24  Score=171.44  Aligned_cols=168  Identities=15%  Similarity=0.194  Sum_probs=133.5

Q ss_pred             cccCcEEEEec--CCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQG--ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG--~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .|+||++||||  |++|||+++|++|+++|++  |++++|+.++..  ++..++.+.+...++||++++++++.+++.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~--Vil~~~~~~~~~--~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~   78 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQ--LVLTGFDRLRLI--QRITDRLPAKAPLLELDVQNEEHLASLAGRVT   78 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCE--EEEEECSCHHHH--HHHHTTSSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCE--EEEEeCChHHHH--HHHHHHcCCceeeEeeecccccccccccchhh
Confidence            48999999999  4579999999999999997  999998876532  23334456788899999999999999999998


Q ss_pred             HH---cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          103 EK---YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       103 ~~---~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                      +.   ++.+|++|||+|......  ....++.+.+.+++.+.+.+|+.+.+...+...+++...         .++++++
T Consensus        79 ~~~~~~~~ld~~i~~ag~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~i~~~s  147 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIGFMPQTG--MGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG---------GSIVGMD  147 (268)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGG--STTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE---------EEEEEEE
T ss_pred             hccccCCCcceeeecccccCccc--cccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccc---------ccccccc
Confidence            76   467999999999763111  123456788899999999999999999999887765432         4445555


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .....+   .+++..|+++|+|+++|+|+++
T Consensus       148 ~~~~~~---~p~~~~y~~sK~a~~~ltr~lA  175 (268)
T d2h7ma1         148 FDPSRA---MPAYNWMTVAKSALESVNRFVA  175 (268)
T ss_dssp             CCCSSC---CTTTHHHHHHHHHHHHHHHHHH
T ss_pred             cccccc---Ccccchhhccccchhhccccch
Confidence            555454   5788999999999999999994

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.90  E-value=6.9e-24  Score=167.79  Aligned_cols=177  Identities=21%  Similarity=0.266  Sum_probs=128.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc-ccc-cchhhcCCCceeEEEecCCC----HHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA-TGL-LDLKNRFPERLDVLQLDLTV----ESTIEASAKSIK  102 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~-~~~-~~~~~~~~~~~~~~~~Dl~~----~~~v~~~~~~~~  102 (214)
                      +++|||||++|||+++|++|+++|++  |++.+|+.++. +++ .++....+.+...+++|+.+    ++.++++++++.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~--Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFR--VVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCE--EEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHH
Confidence            48999999999999999999999998  99999987654 333 33444456677777766654    567788888899


Q ss_pred             HHcCCccEEEECccccCCCCCCC----CCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEee
Q 028056          103 EKYGSLNLLINASGILSIPNVLQ----PETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLS  178 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~is  178 (214)
                      ++++++|++|||||+..+.....    ......+...+.+...+..|+.+.+...+...+.+...... ....+.+++++
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  158 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAW-RSRNLSVVNLC  158 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEEC
T ss_pred             HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcccccccccc-ccccccchhhh
Confidence            99999999999999875211100    01112334455677788889999999888887776543321 11225788888


Q ss_pred             cCcccCCCCCCCCcchhhhhHHHHHHHHHHhcc
Q 028056          179 ARVGSIGDNRLGGWHSYRASKAALNQCKILAMD  211 (214)
Q Consensus       179 s~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~  211 (214)
                      +..+..+   .+++..|++||+|+++|+|+++.
T Consensus       159 ~~~~~~~---~~~~~~Y~asKaal~~lt~~lA~  188 (266)
T d1mxha_         159 DAMTDLP---LPGFCVYTMAKHALGGLTRAAAL  188 (266)
T ss_dssp             CGGGGSC---CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             hcccccc---CcchhhhhhhHHHHhhhHHHHHH
Confidence            8887776   68999999999999999999943

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.81  E-value=1.7e-22  Score=152.62  Aligned_cols=159  Identities=13%  Similarity=0.077  Sum_probs=113.0

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ....+|+||+++||||++|||+++|++|+++|++  |++++|+.++++.+.+.+.+. .++....+|++|.+++++++  
T Consensus        16 ~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~--   90 (191)
T d1luaa1          16 AAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAE--VVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV--   90 (191)
T ss_dssp             HTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT--
T ss_pred             HcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccc--hhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh--
Confidence            3457899999999999999999999999999997  999999998877765555432 34667889999999887665  


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                           +++|+||||||...           ...+.++|+..+++|+.+.+.....+.+.+......     ..++..++.
T Consensus        91 -----~~iDilin~Ag~g~-----------~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  149 (191)
T d1luaa1          91 -----KGAHFVFTAGAIGL-----------ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDK-----GKEYGGKRA  149 (191)
T ss_dssp             -----TTCSEEEECCCTTC-----------CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCE-----EEEETTEEE
T ss_pred             -----cCcCeeeecCcccc-----------ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccC-----cEEecceEE
Confidence                 47899999998642           245778899999999888776554443332221111     122222221


Q ss_pred             cccCCCCCCCCcchhhhhHHHHHHHHHHh
Q 028056          181 VGSIGDNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       181 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      .+..+    .+...|+++|+++..++++.
T Consensus       150 ~g~~~----~g~~~y~~sk~a~~~l~~s~  174 (191)
T d1luaa1         150 FGALG----IGGLKLKLHRACIAKLFESS  174 (191)
T ss_dssp             ECHHH----HHHHHHHHHHHHHHHHTSCS
T ss_pred             EeccC----cCcHHHHHHHHHHHHHHhcC
Confidence            11111    23457999999999887653

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.79  E-value=5.1e-19  Score=138.81  Aligned_cols=143  Identities=20%  Similarity=0.263  Sum_probs=107.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH-cCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK-YGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~  107 (214)
                      |++|||||++|||+++|++|+++|++  |++++|++.+                 ..+|+.+.+..+....++... .+.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~--V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQ--IVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCE--EEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            89999999999999999999999998  9999987643                 236888888888777666554 467


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC-------
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR-------  180 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~-------  180 (214)
                      +|++|||||...              ..+.+.+...+|..+...+.+...+.+.+...+      ...++++.       
T Consensus        63 id~lv~~Ag~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~  122 (257)
T d1fjha_          63 MDGLVLCAGLGP--------------QTKVLGNVVSVNYFGATELMDAFLPALKKGHQP------AAVVISSVASAHLAF  122 (257)
T ss_dssp             CSEEEECCCCCT--------------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSC------EEEEECCGGGGSSCG
T ss_pred             CcEEEEcCCCCC--------------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccC------cceeeeeccccchhh
Confidence            999999999753              113455667788888888888888887765443      44444433       


Q ss_pred             --------------------cccCCCCCCCCcchhhhhHHHHHHHHHHh-ccc
Q 028056          181 --------------------VGSIGDNRLGGWHSYRASKAALNQCKILA-MDF  212 (214)
Q Consensus       181 --------------------~~~~~~~~~~~~~~Y~asKaa~~~~~~~l-a~~  212 (214)
                                          .+..+.  .++...|+++|+|+++|+|+| .||
T Consensus       123 ~~~~~~~~~~~g~~~~i~s~~~~~~~--~~~~~~Y~asKaal~~ltr~lA~el  173 (257)
T d1fjha_         123 DKNPLALALEAGEEAKARAIVEHAGE--QGGNLAYAGSKNALTVAVRKRAAAW  173 (257)
T ss_dssp             GGCTTHHHHHHTCHHHHHHHHHTCCT--THHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             hhhhhhhhccCCcEEEEeeehhccCC--CcchHHHHHHhhhhhcccccccccc
Confidence                                222221  344567999999999999999 444

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=1e-18  Score=143.56  Aligned_cols=158  Identities=15%  Similarity=0.117  Sum_probs=112.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-----cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-----ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .|+||||||||.||.+++++|++.|++  |+.++|....     .+.+.........++.++++|++|.++++++++.. 
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYE--VHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCE--EEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc-
Confidence            489999999999999999999999997  8899985432     22222222233458999999999999999999877 


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                          .+|+++|+|+....           ....++....+++|+.|+..+++++...-.+. .      .++|++||...
T Consensus        78 ----~~d~v~h~aa~~~~-----------~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~-~------~r~i~~SS~~v  135 (357)
T d1db3a_          78 ----QPDEVYNLGAMSHV-----------AVSFESPEYTADVDAMGTLRLLEAIRFLGLEK-K------TRFYQASTSEL  135 (357)
T ss_dssp             ----CCSEEEECCCCCTT-----------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT-T------CEEEEEEEGGG
T ss_pred             ----CCCEEEEeeccccc-----------chhhhCHHHHHHHHHHHHHHHHHHHHHhCCCC-C------cEEEEEEchhh
Confidence                79999999997641           12234556678999999999999875442221 1      27999998653


Q ss_pred             c--CCC------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          183 S--IGD------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       183 ~--~~~------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      +  ...      .+..+...|+.+|.+.+.+++.++
T Consensus       136 YG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~  171 (357)
T d1db3a_         136 YGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYR  171 (357)
T ss_dssp             GTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence            2  111      123456789999999999998873

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=7.6e-17  Score=131.48  Aligned_cols=154  Identities=16%  Similarity=0.160  Sum_probs=112.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|+||||||||.||.+++++|+++|++  |+++++.... .+...........++.++.+|++|.+.++.++...     
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~--V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----   73 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYD--CVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----   73 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCe--EEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----
Confidence            479999999999999999999999997  7777654332 22222222223457899999999999998887754     


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC-
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG-  185 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~-  185 (214)
                      .+|+|||+|+...           .....+.....+.+|+.++..+++++...-.+          ++|++||...+.. 
T Consensus        74 ~~d~VihlAa~~~-----------~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~----------~~i~~SS~~vyg~~  132 (347)
T d1z45a2          74 KIDSVIHFAGLKA-----------VGESTQIPLRYYHNNILGTVVLLELMQQYNVS----------KFVFSSSATVYGDA  132 (347)
T ss_dssp             CCCEEEECCSCCC-----------HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCC----------EEEEEEEGGGGCCG
T ss_pred             CCCEEEEcccccc-----------ccccccCcccccccchhhhHHHHHHHHhcccc----------eEEeecceeeecCc
Confidence            7999999998653           11223444567889999999999988643222          8999999765431 


Q ss_pred             -----------CCCCCCcchhhhhHHHHHHHHHHh
Q 028056          186 -----------DNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       186 -----------~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                                 ..+..+...|+.+|.+.+.+.+.+
T Consensus       133 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~  167 (347)
T d1z45a2         133 TRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDL  167 (347)
T ss_dssp             GGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCccccccCCCCCChhHhHHHHHHHHHHHH
Confidence                       112334578999999999998876

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=2.5e-16  Score=127.99  Aligned_cols=152  Identities=17%  Similarity=0.084  Sum_probs=112.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc-cchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      .||||||+|.||.+++++|+++|++  |++++|-....... .........++.++++|++|.+.+.++++..     ++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~--V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHD--VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCE--EEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CC
Confidence            3999999999999999999999997  87777644433221 1111122457999999999999998888765     78


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC-
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-  187 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~-  187 (214)
                      |+|||+|+...           ...+.++..+.+++|+.|+..+++++...-    ..      ++|++||.....+.. 
T Consensus        75 d~ViHlAa~~~-----------~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~----v~------~~i~~Ss~~vy~~~~~  133 (338)
T d1udca_          75 DTVIHFAGLKA-----------VGESVQKPLEYYDNNVNGTLRLISAMRAAN----VK------NFIFSSSATVYGDQPK  133 (338)
T ss_dssp             SEEEECCSCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHHT----CC------EEEEEEEGGGGCSCCS
T ss_pred             CEEEECCCccc-----------hhhHHhCHHHHHHhHHHHHHHHHHHHHHhC----CC------EEEecCcceEEccccc
Confidence            99999998542           123334556788999999999999886542    22      888899876543221 


Q ss_pred             --------CCCCcchhhhhHHHHHHHHHHh
Q 028056          188 --------RLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       188 --------~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                              ...+...|+.+|.+.+.+.+..
T Consensus       134 ~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~  163 (338)
T d1udca_         134 IPYVESFPTGTPQSPYGKSKLMVEQILTDL  163 (338)
T ss_dssp             SSBCTTSCCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccCCCcchHHHHHhhhhHHHHHH
Confidence                    2245788999999999988764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.68  E-value=7e-16  Score=126.60  Aligned_cols=161  Identities=13%  Similarity=0.100  Sum_probs=113.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc--ccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA--TGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      .||||||+|.||.+++++|++.|.. .|+.+++.....  +.+....  ...++.++.+|++|...+..+++..     .
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~-vv~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~~-----~   73 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDIS--ESNRYNFEHADICDSAEITRIFEQY-----Q   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSC-EEEEEECCCTTCCGGGGTTTT--TCTTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCCccccHHHHHhhh--hcCCcEEEEccCCCHHHHHHHHHhC-----C
Confidence            4899999999999999999999998 455555432221  1122221  2357999999999999999888765     7


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC-
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-  186 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-  186 (214)
                      +|+|||+|+...           ...+.++....+++|+.|+..+++.+.......... .....++|++||....... 
T Consensus        74 ~d~VihlAa~~~-----------~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~-~~~~~~~i~~SS~~vyg~~~  141 (361)
T d1kewa_          74 PDAVMHLAAESH-----------VDRSITGPAAFIETNIVGTYALLEVARKYWSALGED-KKNNFRFHHISTDEVYGDLP  141 (361)
T ss_dssp             CSEEEECCSCCC-----------HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHH-HHHHCEEEEEEEGGGGCCCC
T ss_pred             CCEEEECccccc-----------hhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-ccCceEEEEeccceeeCCCc
Confidence            999999998643           123345556789999999999999987764432100 0011289999997644311 


Q ss_pred             -----------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 -----------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 -----------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                                       .+..+...|+.+|.+.+.+++.++
T Consensus       142 ~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~  182 (361)
T d1kewa_         142 HPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWR  182 (361)
T ss_dssp             CGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             cCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence                             122345679999999999998863

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=5.5e-16  Score=125.92  Aligned_cols=156  Identities=15%  Similarity=0.090  Sum_probs=112.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc--cccchhh----cCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GLLDLKN----RFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~--~~~~~~~----~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      |++|||||+|.||.+++++|+++|+.  |+.++|......  .+..+..    ....++.++.+|++|.+.+.+++++. 
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~--V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYE--VHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCE--EEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc-
Confidence            44599999999999999999999997  998888654321  1222211    12347899999999999999999877 


Q ss_pred             HHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          103 EKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                          .+++++|.++...           .....+.....+++|+.|+..+++++..+-....       .++|++||...
T Consensus        79 ----~~~~v~~~~a~~~-----------~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~-------~~~i~~SS~~v  136 (347)
T d1t2aa_          79 ----KPTEIYNLGAQSH-----------VKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS-------VKFYQASTSEL  136 (347)
T ss_dssp             ----CCSEEEECCSCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTT-------CEEEEEEEGGG
T ss_pred             ----ccceeeeeeeccc-----------cchhhccchhhhhhHHHHHHHHHHHHHHcCCCCC-------cEEEEecchhe
Confidence                7889999987643           1223344555689999999999988765533221       27999998653


Q ss_pred             cCC--------CCCCCCcchhhhhHHHHHHHHHHh
Q 028056          183 SIG--------DNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       183 ~~~--------~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      +..        ..+..+...|+.+|.+.|.+++.+
T Consensus       137 yg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~  171 (347)
T d1t2aa_         137 YGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNF  171 (347)
T ss_dssp             TCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            321        123345678999999999998876

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=3.7e-16  Score=129.34  Aligned_cols=158  Identities=15%  Similarity=0.088  Sum_probs=110.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeec----------CCCCcc---c----ccchhhcCCCceeEEEecCCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCR----------NPNGAT---G----LLDLKNRFPERLDVLQLDLTV   90 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r----------~~~~~~---~----~~~~~~~~~~~~~~~~~Dl~~   90 (214)
                      |++||||||||.||.+++++|++.|++  |+.+|.          ....+.   .    +.......+.++.++.+|++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~--V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d   78 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYE--VCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   78 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCE--EEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCC
Confidence            688999999999999999999999997  776641          111111   1    111111224679999999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCC
Q 028056           91 ESTIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERD  170 (214)
Q Consensus        91 ~~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~  170 (214)
                      .+.++++++..     ++|+|+|.|+...        ......+++.....+++|+.|+..+++.+...-.+        
T Consensus        79 ~~~l~~~~~~~-----~~d~ViHlAa~~~--------~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~--------  137 (393)
T d1i24a_          79 FEFLAESFKSF-----EPDSVVHFGEQRS--------APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEE--------  137 (393)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCC--------HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTT--------
T ss_pred             HHHHHHHHHhh-----cchheeccccccc--------cccccccccccccccccccccccHHHHHHHHhccc--------
Confidence            99999998876     8999999998653        22233445666778899999999999987644222        


Q ss_pred             ceEEEEeecCcccCCC---------------------CCCCCcchhhhhHHHHHHHHHHh
Q 028056          171 VAVVANLSARVGSIGD---------------------NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       171 ~~~iv~iss~~~~~~~---------------------~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                       ..+++.||.......                     .+..+...|+.+|.+.+.+++.+
T Consensus       138 -~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~  196 (393)
T d1i24a_         138 -CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFT  196 (393)
T ss_dssp             -CEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             -cceeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccc
Confidence             166666665432210                     01233467999999999998876

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.64  E-value=2.2e-15  Score=122.62  Aligned_cols=157  Identities=15%  Similarity=0.204  Sum_probs=116.4

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +++|+||||||||.||.+++++|+++|++  |+.++|+..+.....+.. ....++.++.+|++|.+.+.+++...    
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~--V~~~~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGAT--VKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIREF----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCE--EEEEECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhhc----
Confidence            68999999999999999999999999997  999999887654433222 22357999999999999998888766    


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                       .+|+++|.|+...           .....+.....+.+|+.|+..+++++...-..         ..++..|+......
T Consensus        79 -~~~~v~~~aa~~~-----------~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~---------~~~~~~s~~~~~~~  137 (356)
T d1rkxa_          79 -QPEIVFHMAAQPL-----------VRLSYSEPVETYSTNVMGTVYLLEAIRHVGGV---------KAVVNITSDKCYDN  137 (356)
T ss_dssp             -CCSEEEECCSCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCC---------CEEEEECCGGGBCC
T ss_pred             -hhhhhhhhhcccc-----------ccccccCCccccccccccchhhhhhhhccccc---------cccccccccccccc
Confidence             8899999998643           22334556678899999999999987643211         15555555443322


Q ss_pred             C---------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 D---------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~---------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .         .+..+...|+.+|...+.+++.++
T Consensus       138 ~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~  171 (356)
T d1rkxa_         138 KEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYR  171 (356)
T ss_dssp             CCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCCCCccccccccchhhhhHHh
Confidence            1         123456789999999998887653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.63  E-value=2.6e-15  Score=120.56  Aligned_cols=153  Identities=14%  Similarity=0.041  Sum_probs=111.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc--ccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      |+||||||||.||++++++|+++|++  |+.++|.......  +..+.  ...++.++.+|++|.+.+.+.+...     
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~--V~~~~r~~~~~~~~~l~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-----   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYR--VHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRAVIKA-----   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCE--EEEEECCCCcccHHHHHHhc--ccCCcEEEEccccChHHhhhhhccc-----
Confidence            78999999999999999999999998  8888887644221  22211  2347899999999999998888776     


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC-
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG-  185 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~-  185 (214)
                      ..++++|+++...           .....+...+.+..|+.|+..++.++...-..         .++++.|+..-... 
T Consensus        72 ~~~~~~~~a~~~~-----------~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~---------~~~i~~Ss~~~~~~~  131 (321)
T d1rpna_          72 QPQEVYNLAAQSF-----------VGASWNQPVTTGVVDGLGVTHLLEAIRQFSPE---------TRFYQASTSEMFGLI  131 (321)
T ss_dssp             CCSEEEECCSCCC-----------HHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTT---------SEEEEEEEGGGGCSC
T ss_pred             ccccccccccccc-----------ccccccchHHHHhhhhhchHHHHHHHHHhCCC---------cccccccchhhcCcc
Confidence            7788888887543           12223445677899999999999887644222         16776666532211 


Q ss_pred             -------CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 -------DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 -------~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                             ..+..+...|+.+|.+.+.+.+.++
T Consensus       132 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  163 (321)
T d1rpna_         132 QAERQDENTPFYPRSPYGVAKLYGHWITVNYR  163 (321)
T ss_dssp             SSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCccccChhHHHHHHHHHHHHHHH
Confidence                   1234567899999999999988773

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=4.9e-15  Score=119.74  Aligned_cols=160  Identities=15%  Similarity=0.058  Sum_probs=112.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-----cccccchhh-cCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-----ATGLLDLKN-RFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-----~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .|++|||||||.||++++++|+++|++  |+.++|....     ...+..... .....+.++.+|+++.+.+.+.++..
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYE--VHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCE--EEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh
Confidence            389999999999999999999999998  9999885432     221211111 11346889999999999999888865


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                           .+|++||+|+...           .....+.....+..|+.++..+..++..........     .+++..||..
T Consensus        79 -----~~D~Vih~Aa~~~-----------~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ss~~  137 (339)
T d1n7ha_          79 -----KPDEVYNLAAQSH-----------VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT-----VKYYQAGSSE  137 (339)
T ss_dssp             -----CCSEEEECCSCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCC-----CEEEEEEEGG
T ss_pred             -----ccchhhhcccccc-----------ccccccCccccccccccccchhhhhhhhcccccccc-----eeeeecccce
Confidence                 8999999998653           122334556678899999999988886554432211     2566666654


Q ss_pred             ccCC-------CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          182 GSIG-------DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       182 ~~~~-------~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ....       ..+..+...|+.+|.+.+.+++.++
T Consensus       138 ~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  173 (339)
T d1n7ha_         138 MFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYR  173 (339)
T ss_dssp             GGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             ecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHH
Confidence            3222       1234567899999999999988763

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.60  E-value=7.1e-15  Score=118.34  Aligned_cols=151  Identities=14%  Similarity=0.129  Sum_probs=105.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      .||||||+|.||++++++|+++|++  |+.+++-...... -.... ....++.++.+|++|.+++.++++..     ++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~--V~~id~~~~~~~~~~~~~~-~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGID--LIVFDNLSRKGATDNLHWL-SSLGNFEFVHGDIRNKNDVTRLITKY-----MP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCCSTTHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCE--EEEEECCCcccchhHHHHh-hccCCcEEEEcccCCHHHHHHHHHhc-----CC
Confidence            5899999999999999999999997  7766642222111 11111 12457899999999999999888866     78


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC--
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD--  186 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~--  186 (214)
                      |++||+|+...           .....++....+++|+.|+..+++++...-.    .      ..+++||.....+.  
T Consensus        74 d~Vih~aa~~~-----------~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~----~------~~i~~sS~~~~~~~~~  132 (338)
T d1orra_          74 DSCFHLAGQVA-----------MTTSIDNPCMDFEINVGGTLNLLEAVRQYNS----N------CNIIYSSTNKVYGDLE  132 (338)
T ss_dssp             SEEEECCCCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----T------CEEEEEEEGGGGTTCT
T ss_pred             ceEEeeccccc-----------ccccccChHHHHHHHHHHHHHHHHhhhcccc----c------cccccccccccccccc
Confidence            99999998653           1223345667889999999999998754321    1      44444444332221  


Q ss_pred             -----------------------CCCCCcchhhhhHHHHHHHHHHh
Q 028056          187 -----------------------NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       187 -----------------------~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                                             .+..+...|+.+|...+.+....
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~  178 (338)
T d1orra_         133 QYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDY  178 (338)
T ss_dssp             TSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccCcccCCccccccccccccchhhhhhhhh
Confidence                                   11234678999999988877655

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1e-14  Score=118.40  Aligned_cols=153  Identities=18%  Similarity=0.126  Sum_probs=109.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC------ccc-ccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG------ATG-LLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~------~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      |+||||||+|.||.+++++|++.|..  |+.+++....      ... ..........++.++++|++|.+.+++++...
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~--V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYL--PVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCC--EEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCE--EEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc
Confidence            68899999999999999999999998  7777642221      111 11111122467899999999999998877654


Q ss_pred             HHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          102 KEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                           .+++++|.|+...           .....+...+.+++|+.|+..+++++.    +.+..      .++++||..
T Consensus        81 -----~~~~i~h~Aa~~~-----------~~~~~~~p~~~~~~Nv~gt~~l~~~~~----~~~v~------~~i~~ss~~  134 (346)
T d1ek6a_          81 -----SFMAVIHFAGLKA-----------VGESVQKPLDYYRVNLTGTIQLLEIMK----AHGVK------NLVFSSSAT  134 (346)
T ss_dssp             -----CEEEEEECCSCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCC------EEEEEEEGG
T ss_pred             -----ccccccccccccC-----------cHhhHhCHHHHHHhhhcccccccchhh----hcCcc------cccccccce
Confidence                 7889999998653           123334456678999999999888764    33332      788888875


Q ss_pred             ccCCCC---------CCCCcchhhhhHHHHHHHHHHh
Q 028056          182 GSIGDN---------RLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       182 ~~~~~~---------~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      ......         .......|+.+|...+...+.+
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~  171 (346)
T d1ek6a_         135 VYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL  171 (346)
T ss_dssp             GGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             eeeccccccccccccccccCChHHHHHHHHHHHHHHH
Confidence            444321         1234568999999999888776

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.57  E-value=4.5e-14  Score=114.70  Aligned_cols=154  Identities=12%  Similarity=0.076  Sum_probs=105.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +.|.||||||||.||.+++++|+++|...+|+..+....... ....-.-.+.++.++.+|+.|.+.+..++.       
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~-~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------   72 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN-KANLEAILGDRVELVVGDIADAELVDKLAA-------   72 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC-GGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcccc-HHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------
Confidence            347899999999999999999999999844555543221111 111111224689999999999998887764       


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC-
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG-  185 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~-  185 (214)
                      ..|.++|.|+...           .....++..+.+++|+.|+..++..+...-.           ++|++||...+.. 
T Consensus        73 ~~~~v~~~a~~~~-----------~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-----------k~i~~ss~~vyg~~  130 (346)
T d1oc2a_          73 KADAIVHYAAESH-----------NDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-----------RFHHVSTDEVYGDL  130 (346)
T ss_dssp             TCSEEEECCSCCC-----------HHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-----------EEEEEEEGGGGCCB
T ss_pred             hhhhhhhhhhccc-----------ccchhhCcccceeeehHhHHhhhhhhccccc-----------cccccccceEeccc
Confidence            6788999998653           1122344566788999999999987754421           5666666543211 


Q ss_pred             -------------------CCCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 -------------------DNRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 -------------------~~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                                         ..+..+.+.|+.+|.+.+.+.+.+.
T Consensus       131 ~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~  174 (346)
T d1oc2a_         131 PLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWV  174 (346)
T ss_dssp             CCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence                               0123345789999999999998773

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=7.2e-14  Score=105.55  Aligned_cols=139  Identities=12%  Similarity=0.075  Sum_probs=96.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ..|+|+||||||+||.+++++|+++|++  |.+++|++++++...      ..++.++.+|++|.+++.++++       
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~--V~~~~R~~~~~~~~~------~~~~~~~~gD~~d~~~l~~al~-------   66 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYE--VTVLVRDSSRLPSEG------PRPAHVVVGDVLQAADVDKTVA-------   66 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCE--EEEEESCGGGSCSSS------CCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCE--EEEEEcChhhccccc------ccccccccccccchhhHHHHhc-------
Confidence            4578999999999999999999999997  999999887644321      3468899999999998877765       


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      ..|++||++|...      +..+            .+++..++..+++    .+++++..      ++|++||.......
T Consensus        67 ~~d~vi~~~g~~~------~~~~------------~~~~~~~~~~l~~----aa~~~~v~------r~i~~ss~~~~~~~  118 (205)
T d1hdoa_          67 GQDAVIVLLGTRN------DLSP------------TTVMSEGARNIVA----AMKAHGVD------KVVACTSAFLLWDP  118 (205)
T ss_dssp             TCSEEEECCCCTT------CCSC------------CCHHHHHHHHHHH----HHHHHTCC------EEEEECCGGGTSCT
T ss_pred             CCCEEEEEeccCC------chhh------------hhhhHHHHHHHHH----HHHhcCCC------eEEEEeeeeccCCC
Confidence            6799999998643      1111            1222334444444    44555544      89999986654432


Q ss_pred             C-CCCCcchhhhhHHHHHHHHHH
Q 028056          187 N-RLGGWHSYRASKAALNQCKIL  208 (214)
Q Consensus       187 ~-~~~~~~~Y~asKaa~~~~~~~  208 (214)
                      . ..+....|...|...+.+.+.
T Consensus       119 ~~~~~~~~~~~~~~~~~e~~l~~  141 (205)
T d1hdoa_         119 TKVPPRLQAVTDDHIRMHKVLRE  141 (205)
T ss_dssp             TCSCGGGHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHHHHHHHh
Confidence            1 123334677777777766553

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.54  E-value=1.4e-15  Score=123.80  Aligned_cols=151  Identities=16%  Similarity=0.100  Sum_probs=105.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc--CCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +||+||||||+|.||.+++++|+++|++  |+.+.|+.++.+.+......  .......+.+|+.|.+++.+++.     
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~--V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYK--VRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCE--EEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-----
Confidence            4899999999999999999999999997  88889987554433322211  12234456789999987766554     


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSI  184 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~  184 (214)
                        .+|+++|+++...       .    ..+   ....+..|+.|+..+++.+...   .+.      .++|++||.....
T Consensus        83 --~~~~v~~~a~~~~-------~----~~~---~~~~~~~nv~gt~~ll~~~~~~---~~v------~~~i~~SS~~~~~  137 (342)
T d1y1pa1          83 --GAAGVAHIASVVS-------F----SNK---YDEVVTPAIGGTLNALRAAAAT---PSV------KRFVLTSSTVSAL  137 (342)
T ss_dssp             --TCSEEEECCCCCS-------C----CSC---HHHHHHHHHHHHHHHHHHHHTC---TTC------CEEEEECCGGGTC
T ss_pred             --cchhhhhhccccc-------c----ccc---ccccccchhhhHHHHHHhhhcc---ccc------ccccccccceeec
Confidence              6899999998653       1    111   2334667999999998887543   112      2889999975432


Q ss_pred             CC----------------------------CCCCCcchhhhhHHHHHHHHHHh
Q 028056          185 GD----------------------------NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       185 ~~----------------------------~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      ..                            .+..+...|+.+|.+.+.+.+.+
T Consensus       138 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~  190 (342)
T d1y1pa1         138 IPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKF  190 (342)
T ss_dssp             CCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHh
Confidence            21                            11223467999999999988766

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=3.3e-14  Score=113.77  Aligned_cols=136  Identities=11%  Similarity=-0.045  Sum_probs=99.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      .|.||||||||.||.+++++|+++|..  +++.+...                    .+|+.+.+.++++++.-     .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~--vi~~~~~~--------------------~~~~~~~~~~~~~~~~~-----~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDV--ELVLRTRD--------------------ELNLLDSRAVHDFFASE-----R   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTE--EEECCCTT--------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCE--EEEecCch--------------------hccccCHHHHHHHHhhc-----C
Confidence            478999999999999999999999986  55544321                    15899999988887643     7


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN  187 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~  187 (214)
                      +|.++|+|+...       .   .........+.+++|+.++..+++++..+    +..      ++|++||.+.+.+..
T Consensus        55 ~d~v~~~a~~~~-------~---~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~v~------~~i~~SS~~vyg~~~  114 (315)
T d1e6ua_          55 IDQVYLAAAKVG-------G---IVANNTYPADFIYQNMMIESNIIHAAHQN----DVN------KLLFLGSSCIYPKLA  114 (315)
T ss_dssp             CSEEEECCCCCC-------C---HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCC------EEEEECCGGGSCTTC
T ss_pred             CCEEEEcchhcc-------c---cccchhhHHHHHHHHHHHHHHHHHHHHHc----CCC------EEEEECCceEcCCCC
Confidence            899999997653       1   11233444556788999999999887543    222      899999987654221


Q ss_pred             -------------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 -------------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 -------------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                                   +.+....|+.+|.+.|.+++.+.
T Consensus       115 ~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  150 (315)
T d1e6ua_         115 KQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYN  150 (315)
T ss_dssp             CSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence                         12234579999999999998873

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.52  E-value=6.5e-14  Score=113.45  Aligned_cols=155  Identities=12%  Similarity=0.068  Sum_probs=111.0

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC-cccccc---hh-hcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG-ATGLLD---LK-NRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~-~~~~~~---~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .+-|++|||||||.||++++++|.+.|++  |+.+++.... ...+..   .. .....++.++.+|+.|......... 
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~--V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-   90 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQK--VVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-   90 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCE--EEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc-
Confidence            34589999999999999999999999997  8888763322 111111   11 1113468899999999887654433 


Q ss_pred             HHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          101 IKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                            ..+.++|.++...           .....++....+++|+.|+..+++++...    +..      .+|++||.
T Consensus        91 ------~~~~v~~~~a~~~-----------~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~~------~~i~~SS~  143 (341)
T d1sb8a_          91 ------GVDYVLHQAALGS-----------VPRSINDPITSNATNIDGFLNMLIAARDA----KVQ------SFTYAASS  143 (341)
T ss_dssp             ------TCSEEEECCSCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCS------EEEEEEEG
T ss_pred             ------ccccccccccccc-----------ccccccCccchhheeehhHHHHHHHHHhc----CCc------eEEEcccc
Confidence                  6788888887543           12245667778999999999999988543    222      89999997


Q ss_pred             cccCCC--------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          181 VGSIGD--------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       181 ~~~~~~--------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      ..+...        .+..+...|+.+|.+.+.+.+.++
T Consensus       144 ~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  181 (341)
T d1sb8a_         144 STYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFS  181 (341)
T ss_dssp             GGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             eeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHH
Confidence            654321        234456899999999999998774

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.52  E-value=7e-14  Score=114.14  Aligned_cols=148  Identities=14%  Similarity=-0.036  Sum_probs=106.5

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++..||||||+|.||.+++++|+++|.+  |+.+++......  ...    .....+..+|+.+.+.+.++++       
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~--V~~~d~~~~~~~--~~~----~~~~~~~~~D~~~~~~~~~~~~-------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHY--VIASDWKKNEHM--TED----MFCDEFHLVDLRVMENCLKVTE-------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCE--EEEEESSCCSSS--CGG----GTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCE--EEEEeCCCccch--hhh----cccCcEEEeechhHHHHHHHhh-------
Confidence            5556999999999999999999999997  777776543311  111    1245678889998887765554       


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD  186 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~  186 (214)
                      .+|++||.|+...          ......+.....+.+|+.++..++.++...    +..      ++|++||.......
T Consensus        79 ~~d~Vih~a~~~~----------~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~----~vk------~~i~~SS~~~~~~~  138 (363)
T d2c5aa1          79 GVDHVFNLAADMG----------GMGFIQSNHSVIMYNNTMISFNMIEAARIN----GIK------RFFYASSACIYPEF  138 (363)
T ss_dssp             TCSEEEECCCCCC----------CHHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCS------EEEEEEEGGGSCGG
T ss_pred             cCCeEeecccccc----------cccccccccccccccccchhhHHHHhHHhh----Ccc------cccccccccccccc
Confidence            6899999998653          122233455667888999999998887544    222      89999997654421


Q ss_pred             ---------------CCCCCcchhhhhHHHHHHHHHHh
Q 028056          187 ---------------NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       187 ---------------~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                                     .+..+...|+.+|.+.+.+++.+
T Consensus       139 ~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~  176 (363)
T d2c5aa1         139 KQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHY  176 (363)
T ss_dssp             GSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHH
Confidence                           12234578999999999999876

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=1e-13  Score=112.23  Aligned_cols=147  Identities=12%  Similarity=0.063  Sum_probs=103.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      +||||||||.||.+++++|+++|.. .|+.+++.........+     ..++.++++|+++.+++.+.+.   +   .+|
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~-~V~~ld~~~~~~~~~~~-----~~~~~~i~~Di~~~~~~~~~~~---~---~~d   69 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFLN-----HPHFHFVEGDISIHSEWIEYHV---K---KCD   69 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGGGGGGTT-----CTTEEEEECCTTTCSHHHHHHH---H---HCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCCcchhhhcc-----CCCeEEEECccCChHHHHHHHH---h---CCC
Confidence            4899999999999999999999953 48877775544332221     3579999999998877654322   1   479


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC---
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD---  186 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~---  186 (214)
                      ++||+|+...           .....+...+.+.+|+.|+..+++.+...    +.       ..+++||.......   
T Consensus        70 ~Vih~a~~~~-----------~~~~~~~~~~~~~~nv~gt~~ll~~~~~~----~~-------~~~~~ss~~~~~~~~~~  127 (342)
T d2blla1          70 VVLPLVAIAT-----------PIEYTRNPLRVFELDFEENLRIIRYCVKY----RK-------RIIFPSTSEVYGMCSDK  127 (342)
T ss_dssp             EEEECBCCCC-----------HHHHHHSHHHHHHHHTHHHHHHHHHHHHT----TC-------EEEEECCGGGGBTCCCS
T ss_pred             cccccccccc-----------ccccccCCccccccccccccccccccccc----cc-------ccccccccccccccccc
Confidence            9999999754           11233445667899999999999987533    21       55566665433321   


Q ss_pred             ------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 ------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                                  ....+...|+.+|.+.+.+.+.++
T Consensus       128 ~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~  163 (342)
T d2blla1         128 YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYG  163 (342)
T ss_dssp             SBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccCCCcchhhhcccchhhhhhhhh
Confidence                        012335789999999999998774

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.49  E-value=3.9e-13  Score=108.01  Aligned_cols=153  Identities=18%  Similarity=0.090  Sum_probs=106.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCc----EEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKG----CVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~----~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +||||||+|.||.+++++|+++|...    .++..+.-................++.++.+|+++........       
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-------   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccc-------
Confidence            48999999999999999999998751    2333333222111111111123457999999999988765433       


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      ..+|.++|.|+...           .....+...+.+++|+.++..+++++...    +..      .+|++||.....+
T Consensus        75 ~~~d~vi~~a~~~~-----------~~~~~~~~~~~~~~N~~gt~~ll~~~~~~----~~~------~~I~~Ss~~~yg~  133 (322)
T d1r6da_          75 RGVDAIVHFAAESH-----------VDRSIAGASVFTETNVQGTQTLLQCAVDA----GVG------RVVHVSTNQVYGS  133 (322)
T ss_dssp             TTCCEEEECCSCCC-----------HHHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCC------EEEEEEEGGGGCC
T ss_pred             cccceEEeeccccc-----------ccccccchHHHhhhhHHHHHHHHHHHHHc----CCc------eEEEeecceeecC
Confidence            37899999998653           23344556667899999999999988533    222      8999999765432


Q ss_pred             C--------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          186 D--------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       186 ~--------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                      .        .+..+...|+.+|.+.+.+++.++
T Consensus       134 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  166 (322)
T d1r6da_         134 IDSGSWTESSPLEPNSPYAASKAGSDLVARAYH  166 (322)
T ss_dssp             CSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            1        234556799999999999998874

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.4e-13  Score=110.43  Aligned_cols=144  Identities=13%  Similarity=0.118  Sum_probs=97.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC-CcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN-GATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      |+||||||+|.||++++++|+++|++  |+.+++... ..+.+.....  ..++.....|+.+.            ....
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~--V~~~d~~~~~~~~~~~~~~~--~~~~d~~~~~~~~~------------~~~~   65 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHE--VTVVDNFFTGRKRNVEHWIG--HENFELINHDVVEP------------LYIE   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCE--EEEEECCSSCCGGGTGGGTT--CTTEEEEECCTTSC------------CCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCE--EEEEeCCCcCCHHHHHHhcC--CCceEEEehHHHHH------------HHcC
Confidence            78999999999999999999999997  777776332 2222222211  22444555554322            1236


Q ss_pred             ccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC-
Q 028056          108 LNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD-  186 (214)
Q Consensus       108 vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~-  186 (214)
                      +|+|||+|+...           .....++..+.+++|+.|+..+++++...    +       .++|++||.+..... 
T Consensus        66 ~d~VihlAa~~~-----------~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~----~-------~k~I~~SS~~vy~~~~  123 (312)
T d2b69a1          66 VDQIYHLASPAS-----------PPNYMYNPIKTLKTNTIGTLNMLGLAKRV----G-------ARLLLASTSEVYGDPE  123 (312)
T ss_dssp             CSEEEECCSCCS-----------HHHHTTCHHHHHHHHHHHHHHHHHHHHHH----T-------CEEEEEEEGGGGBSCS
T ss_pred             CCEEEECcccCC-----------chhHHhCHHHHHHHHHHHHHHHHHHHHHc----C-------CcEEEEEChheecCCC
Confidence            899999998643           11122345667889999999999887532    2       178899986544321 


Q ss_pred             ------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          187 ------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       187 ------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                                  .+..+...|+.+|.+.+.+++.++
T Consensus       124 ~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~  159 (312)
T d2b69a1         124 VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYM  159 (312)
T ss_dssp             SSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence                        123456789999999999998873

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.46  E-value=4.6e-13  Score=110.06  Aligned_cols=154  Identities=15%  Similarity=0.094  Sum_probs=104.7

Q ss_pred             EEEEecCCCchhHHHHHHHHh-cCCCcEEEEeec---CCCC---cc---cccchhh--------cCCCceeEEEecCCCH
Q 028056           30 VSLVQGASRGIGLEFAKQLLE-KNDKGCVIATCR---NPNG---AT---GLLDLKN--------RFPERLDVLQLDLTVE   91 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~-~g~~~~vi~~~r---~~~~---~~---~~~~~~~--------~~~~~~~~~~~Dl~~~   91 (214)
                      .||||||+|.||.+++++|++ .|++  |+.+|+   +...   .+   .......        .......++.+|++|.
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~--V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHS--VVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCE--EEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCE--EEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            589999999999999999987 5665  777653   1111   11   1111111        1123677899999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCc
Q 028056           92 STIEASAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDV  171 (214)
Q Consensus        92 ~~v~~~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~  171 (214)
                      +.++++++..    .++|+|+|.|+...           .....+.....+++|+.++..+++++...    +..     
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~-----------~~~~~~~~~~~~~~N~~~t~~~l~~~~~~----~~~-----  137 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLA-----------VGESVRDPLKYYDNNVVGILRLLQAMLLH----KCD-----  137 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCC-----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCC-----
T ss_pred             HHhhhhhhcc----ceeehhhccccccc-----------ccccccccccccccccccccccchhhhcc----CCc-----
Confidence            9988877654    57899999998653           12233445567889999999998887543    222     


Q ss_pred             eEEEEeecCcccCCC---------------CCCCCcchhhhhHHHHHHHHHHhc
Q 028056          172 AVVANLSARVGSIGD---------------NRLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       172 ~~iv~iss~~~~~~~---------------~~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                       .++++++.......               .+..+...|+.+|.+.+.+++.+.
T Consensus       138 -~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~  190 (383)
T d1gy8a_         138 -KIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCA  190 (383)
T ss_dssp             -EEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHH
T ss_pred             -ccccccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHH
Confidence             66666665433211               123456889999999999998874

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.2e-13  Score=106.34  Aligned_cols=148  Identities=13%  Similarity=0.032  Sum_probs=104.5

Q ss_pred             ccccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHH
Q 028056           20 ASASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        20 ~~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      .+..+.+++|+||||||||.||.+++++|+++|.-..|.+++|++.....-      ...++....+|+.+.+++.+   
T Consensus         6 ~~~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~~~~i~~~~~D~~~~~~~~~---   76 (232)
T d2bkaa1           6 LREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------AYKNVNQEVVDFEKLDDYAS---   76 (232)
T ss_dssp             HHHHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------GGGGCEEEECCGGGGGGGGG---
T ss_pred             HHHHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------ccceeeeeeecccccccccc---
Confidence            345677899999999999999999999999999622499999987553321      12356677788877665433   


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                          .+...|++||++|...              ......+..++|+.++..+++.+.    +.+..      ++|++|+
T Consensus        77 ----~~~~~d~vi~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~a~----~~~v~------~fi~~Ss  128 (232)
T d2bkaa1          77 ----AFQGHDVGFCCLGTTR--------------GKAGAEGFVRVDRDYVLKSAELAK----AGGCK------HFNLLSS  128 (232)
T ss_dssp             ----GGSSCSEEEECCCCCH--------------HHHHHHHHHHHHTHHHHHHHHHHH----HTTCC------EEEEECC
T ss_pred             ----cccccccccccccccc--------------cccchhhhhhhcccccceeeeccc----ccCcc------ccccCCc
Confidence                3347899999998542              112233456778888888888764    33333      8999998


Q ss_pred             CcccCCCCCCCCcchhhhhHHHHHHHHHHh
Q 028056          180 RVGSIGDNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       180 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      ......     ....|+.+|...+...+.+
T Consensus       129 ~~~~~~-----~~~~Y~~~K~~~E~~l~~~  153 (232)
T d2bkaa1         129 KGADKS-----SNFLYLQVKGEVEAKVEEL  153 (232)
T ss_dssp             TTCCTT-----CSSHHHHHHHHHHHHHHTT
T ss_pred             cccccC-----ccchhHHHHHHhhhccccc
Confidence            765332     3357999999988776554

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.37  E-value=3.3e-12  Score=97.27  Aligned_cols=133  Identities=17%  Similarity=0.097  Sum_probs=90.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      +|||||||||.||++++++|+++|....|+...|++++.+       ....+++++.+|+++.+++.++++       .+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~-------~~   69 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-------KIGGEADVFIGDITDADSINPAFQ-------GI   69 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH-------HTTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH-------hccCCcEEEEeeeccccccccccc-------cc
Confidence            7999999999999999999999998755777778764322       224578899999999998877765       68


Q ss_pred             cEEEECccccCCCCCCC--CCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          109 NLLINASGILSIPNVLQ--PETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      |.+||+++....+....  ............+.....+|+.++..+.........    +      .....++.....+
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------~~~~~s~~~~~~~  138 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV----K------HIVVVGSMGGTNP  138 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTC----S------EEEEEEETTTTCT
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccc----c------ccccccccccCCC
Confidence            99999998754111000  011112233334555667788888777766544322    2      6677776554443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.31  E-value=4.7e-12  Score=99.62  Aligned_cols=133  Identities=18%  Similarity=0.170  Sum_probs=95.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      .||||||+|.||.+++++|.+.|.   ++.++++...                 +.+|++|.+.++++++..     ++|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~---~v~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D   56 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN---LIALDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPD   56 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE---EEEECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC---EEEEECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCC
Confidence            489999999999999999998875   4444443321                 236999999999888866     799


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCC---
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGD---  186 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~---  186 (214)
                      +|||+||...       .    +...+.....++.|+.++..+.+++..    .+       ..++++||.....+.   
T Consensus        57 ~Vih~Aa~~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-------~~~~~~ss~~~~~~~~~~  114 (298)
T d1n2sa_          57 VIVNAAAHTA-------V----DKAESEPELAQLLNATSVEAIAKAANE----TG-------AWVVHYSTDYVFPGTGDI  114 (298)
T ss_dssp             EEEECCCCCC-------H----HHHTTCHHHHHHHHTHHHHHHHHHHTT----TT-------CEEEEEEEGGGSCCCTTC
T ss_pred             EEEEeccccc-------c----cccccCccccccccccccccchhhhhc----cc-------cccccccccccccCCCCC
Confidence            9999998653       1    122334456678899999888887642    22       277777776544322   


Q ss_pred             -----CCCCCcchhhhhHHHHHHHHHHh
Q 028056          187 -----NRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       187 -----~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                           .+..+...|+.+|.+.+.+.+..
T Consensus       115 ~~~E~~~~~p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_         115 PWQETDATSPLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             CBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             CCccccccCCCchHhhhhhhhhhhHHhh
Confidence                 23345678999999998877654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.23  E-value=6e-11  Score=92.61  Aligned_cols=130  Identities=23%  Similarity=0.213  Sum_probs=92.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      .||||||||.||.+++++|.++|++  |+..+|++                     +|+.|.++++++++..     ++|
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~--Vi~~~r~~---------------------~D~~d~~~~~~~l~~~-----~~d   54 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVE--VIPTDVQD---------------------LDITNVLAVNKFFNEK-----KPN   54 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEE--EEEECTTT---------------------CCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCE--EEEeechh---------------------ccCCCHHHHHHHHHHc-----CCC
Confidence            3899999999999999999999997  88888753                     4899999999888766     789


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC----
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG----  185 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~----  185 (214)
                      ++||+++...           .+.........+..|+.....+.........           .++..|+......    
T Consensus        55 ~vih~a~~~~-----------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-----------~~~~~ss~~v~~~~~~~  112 (281)
T d1vl0a_          55 VVINCAAHTA-----------VDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-----------EIVQISTDYVFDGEAKE  112 (281)
T ss_dssp             EEEECCCCCC-----------HHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-----------EEEEEEEGGGSCSCCSS
T ss_pred             EEEeeccccc-----------cccccccchhhcccccccccccccccccccc-----------cccccccceeeeccccc
Confidence            9999998653           1222334445566777777776665543311           5555555433221    


Q ss_pred             ----CCCCCCcchhhhhHHHHHHHHHHh
Q 028056          186 ----DNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       186 ----~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                          ..+..+...|+.+|...+.+.+..
T Consensus       113 ~~~e~~~~~~~~~~~~~k~~~e~~~~~~  140 (281)
T d1vl0a_         113 PITEFDEVNPQSAYGKTKLEGENFVKAL  140 (281)
T ss_dssp             CBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccchhhhhhhhhHHHHHHHHh
Confidence                123456778999999988877654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.13  E-value=3.3e-10  Score=89.27  Aligned_cols=82  Identities=12%  Similarity=0.040  Sum_probs=62.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc--ccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .++||||||||.||++++++|+++|.+  |++++|++.....  ..........++.++++|+.|.+.+.+.++      
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~--V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~------   74 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHP--TYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK------   74 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC--EEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCE--EEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc------
Confidence            356999999999999999999999998  8888997765332  111111224568899999999988876665      


Q ss_pred             CCccEEEECcccc
Q 028056          106 GSLNLLINASGIL  118 (214)
Q Consensus       106 ~~vd~lv~nag~~  118 (214)
                       ..+.++++++..
T Consensus        75 -~~~~~~~~~~~~   86 (312)
T d1qyda_          75 -QVDVVISALAGG   86 (312)
T ss_dssp             -TCSEEEECCCCS
T ss_pred             -Ccchhhhhhhhc
Confidence             678888888754

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.11  E-value=1.2e-10  Score=87.74  Aligned_cols=134  Identities=19%  Similarity=0.089  Sum_probs=88.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |++|||||||.||++++++|+++|....|+..+|++...          ..+   +..+..|..++.   +   ...+.+
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~----------~~~---~~~~~~d~~~~~---~---~~~~~~   63 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE----------HPR---LDNPVGPLAELL---P---QLDGSI   63 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC----------CTT---EECCBSCHHHHG---G---GCCSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh----------ccc---ccccccchhhhh---h---ccccch
Confidence            799999999999999999999999853477777755321          111   233444433321   1   123568


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCCC
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDNR  188 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~~  188 (214)
                      |.+|+++|...        .  .   ...-.+..++|+.++..+++.+.    +.+..      +++++|+..+..    
T Consensus        64 d~vi~~~g~~~--------~--~---~~~~~~~~~~~~~~~~~~~~~a~----~~~v~------~~i~~Ss~~~~~----  116 (212)
T d2a35a1          64 DTAFCCLGTTI--------K--E---AGSEEAFRAVDFDLPLAVGKRAL----EMGAR------HYLVVSALGADA----  116 (212)
T ss_dssp             SEEEECCCCCH--------H--H---HSSHHHHHHHHTHHHHHHHHHHH----HTTCC------EEEEECCTTCCT----
T ss_pred             heeeeeeeeec--------c--c---cccccccccchhhhhhhcccccc----ccccc------cccccccccccc----
Confidence            99999998642        0  1   11123456778888888888763    33332      899999865533    


Q ss_pred             CCCcchhhhhHHHHHHHHHHh
Q 028056          189 LGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       189 ~~~~~~Y~asKaa~~~~~~~l  209 (214)
                       .....|..+|...|...+.+
T Consensus       117 -~~~~~y~~~K~~~E~~l~~~  136 (212)
T d2a35a1         117 -KSSIFYNRVKGELEQALQEQ  136 (212)
T ss_dssp             -TCSSHHHHHHHHHHHHHTTS
T ss_pred             -ccccchhHHHHHHhhhcccc
Confidence             33468999999998876543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.01  E-value=2.4e-09  Score=86.27  Aligned_cols=137  Identities=12%  Similarity=-0.060  Sum_probs=86.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHH-HHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTI-EASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v-~~~~~~~~~~~  105 (214)
                      +.|+|+||||||.||.+++++|+++|++  |+++.|+..+... .+ . ....++.++++|+.|..++ +.++       
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~--V~~l~R~~~~~~~-~~-~-~~~~~v~~~~gD~~d~~~~~~~a~-------   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHH--VRAQVHSLKGLIA-EE-L-QAIPNVTLFQGPLLNNVPLMDTLF-------   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCC--EEEEESCSCSHHH-HH-H-HTSTTEEEEESCCTTCHHHHHHHH-------
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCe--EEEEECCcchhhh-hh-h-cccCCCEEEEeeCCCcHHHHHHHh-------
Confidence            5699999999999999999999999998  9999998876332 11 1 1234688999999986543 3232       


Q ss_pred             CCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCC
Q 028056          106 GSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIG  185 (214)
Q Consensus       106 ~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~  185 (214)
                      ...|.++.+.....                       ..++.....++.++    .+.+..      +++..||......
T Consensus        70 ~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~aa----~~agv~------~~v~~Ss~~~~~~  116 (350)
T d1xgka_          70 EGAHLAFINTTSQA-----------------------GDEIAIGKDLADAA----KRAGTI------QHYIYSSMPDHSL  116 (350)
T ss_dssp             TTCSEEEECCCSTT-----------------------SCHHHHHHHHHHHH----HHHSCC------SEEEEEECCCGGG
T ss_pred             cCCceEEeeccccc-----------------------chhhhhhhHHHHHH----HHhCCC------ceEEEeecccccc
Confidence            35677776654221                       01222233344443    232222      5666777654433


Q ss_pred             CCCCCCcchhhhhHHHHHHHHHHh
Q 028056          186 DNRLGGWHSYRASKAALNQCKILA  209 (214)
Q Consensus       186 ~~~~~~~~~Y~asKaa~~~~~~~l  209 (214)
                      . +......|..+|...+.+.+..
T Consensus       117 ~-~~~~~~~~~~~k~~~~~~~~~~  139 (350)
T d1xgka_         117 Y-GPWPAVPMWAPKFTVENYVRQL  139 (350)
T ss_dssp             T-SSCCCCTTTHHHHHHHHHHHTS
T ss_pred             C-CcccchhhhhhHHHHHHHHHhh
Confidence            2 1334467778888887776654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.85  E-value=2.4e-08  Score=77.72  Aligned_cols=82  Identities=17%  Similarity=0.221  Sum_probs=63.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccccc---chhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL---DLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .|+||||||||.||++++++|+++|++  |++++|+........   .........+.++.+|+.+.....+.++     
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~--V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHP--TFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-----   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC--EEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCe--EEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-----
Confidence            478999999999999999999999998  999999876543311   1111123468889999999998777665     


Q ss_pred             cCCccEEEECcccc
Q 028056          105 YGSLNLLINASGIL  118 (214)
Q Consensus       105 ~~~vd~lv~nag~~  118 (214)
                        ..+.++|+++..
T Consensus        76 --~~~~vi~~~~~~   87 (307)
T d1qyca_          76 --NVDVVISTVGSL   87 (307)
T ss_dssp             --TCSEEEECCCGG
T ss_pred             --hceeeeeccccc
Confidence              678899988743

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.85  E-value=3.5e-09  Score=82.98  Aligned_cols=144  Identities=14%  Similarity=0.075  Sum_probs=83.8

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH--HcCCc
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE--KYGSL  108 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~~~v  108 (214)
                      ||||||+|.||.+++++|+++|.+ .|+.+++-... ........       ...+|..+.+.   ..+....  .+..+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~-~V~~~d~~~~~-~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~~~~~~   69 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGIT-DILVVDNLKDG-TKFVNLVD-------LNIADYMDKED---FLIQIMAGEEFGDV   69 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCC-CEEEEECCSSG-GGGHHHHT-------SCCSEEEEHHH---HHHHHHTTCCCSSC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCC-eEEEEECCCCc-chhhcccc-------cchhhhccchH---HHHHHhhhhcccch
Confidence            799999999999999999999974 36665532221 11111110       11123333333   2333332  34578


Q ss_pred             cEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcccCCCC-
Q 028056          109 NLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVGSIGDN-  187 (214)
Q Consensus       109 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~~~~~~-  187 (214)
                      ++++|.|+....      .    .   .......+.|+.++..+.+.+...    +.       .+++.||.....+.. 
T Consensus        70 ~~i~~~aa~~~~------~----~---~~~~~~~~~~~~~~~~~l~~~~~~----~i-------~~v~~ss~~~~~~~~~  125 (307)
T d1eq2a_          70 EAIFHEGACSST------T----E---WDGKYMMDNNYQYSKELLHYCLER----EI-------PFLYASSAATYGGRTS  125 (307)
T ss_dssp             CEEEECCSCCCT------T----C---CCHHHHHHHTHHHHHHHHHHHHHH----TC-------CEEEEEEGGGGTTCCS
T ss_pred             hhhhhhcccccc------c----c---cccccccccccccccccccccccc----cc-------cccccccccccccccc
Confidence            899999875431      1    1   122234566677777777765433    21       344444444433321 


Q ss_pred             -------CCCCcchhhhhHHHHHHHHHHhc
Q 028056          188 -------RLGGWHSYRASKAALNQCKILAM  210 (214)
Q Consensus       188 -------~~~~~~~Y~asKaa~~~~~~~la  210 (214)
                             +..+...|+.+|.+.+.+.+.+.
T Consensus       126 ~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~  155 (307)
T d1eq2a_         126 DFIESREYEKPLNVYGYSKFLFDEYVRQIL  155 (307)
T ss_dssp             CBCSSGGGCCCSSHHHHHHHHHHHHHHHHG
T ss_pred             cccccccccccccccccccchhhhhccccc
Confidence                   23456889999999999998873

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.43  E-value=1.2e-11  Score=91.64  Aligned_cols=44  Identities=14%  Similarity=0.162  Sum_probs=37.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN   75 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~   75 (214)
                      ++.|+||+|+||.++|+.|++.|++  |++.+|++++++.+.+.+.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~--V~l~~R~~e~~~~l~~~i~   45 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHE--IVVGSRREEKAEAKAAEYR   45 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCE--EEEEESSHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHHHHH
Confidence            4678899999999999999999998  9999999988776555443

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.35  E-value=7.7e-07  Score=64.99  Aligned_cols=86  Identities=19%  Similarity=0.127  Sum_probs=66.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC--CceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .++++|+|+|.|+ ||.|++++..|++.|.+ .+.+.+|+++..+++..+..+.+  .......+|+.+.+.+.+...  
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~-~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLK-EIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA--   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCc-eEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc--
Confidence            4689999999999 69999999999999998 79999999988776554443322  234455679988887765544  


Q ss_pred             HHHcCCccEEEECcccc
Q 028056          102 KEKYGSLNLLINASGIL  118 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~  118 (214)
                           ..|++||+....
T Consensus        90 -----~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 -----SADILTNGTKVG  101 (182)
T ss_dssp             -----TCSEEEECSSTT
T ss_pred             -----ccceeccccCCc
Confidence                 779999998653

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.79  E-value=1.5e-05  Score=56.61  Aligned_cols=75  Identities=17%  Similarity=0.243  Sum_probs=54.0

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++++++|.|+ |++|..+++.|...|++ .+.++.|+.++.+.+.+.   .+.++  +  ++   +++.+.+      
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~-~i~v~nRt~~ka~~l~~~---~~~~~--~--~~---~~~~~~l------   82 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVR-AVLVANRTYERAVELARD---LGGEA--V--RF---DELVDHL------   82 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHH---HTCEE--C--CG---GGHHHHH------
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCc-EEEEEcCcHHHHHHHHHh---hhccc--c--cc---hhHHHHh------
Confidence            689999999998 99999999999999997 699999987665443332   23222  1  22   2333222      


Q ss_pred             cCCccEEEECcccc
Q 028056          105 YGSLNLLINASGIL  118 (214)
Q Consensus       105 ~~~vd~lv~nag~~  118 (214)
                       ...|++|++.+..
T Consensus        83 -~~~Divi~atss~   95 (159)
T d1gpja2          83 -ARSDVVVSATAAP   95 (159)
T ss_dssp             -HTCSEEEECCSSS
T ss_pred             -ccCCEEEEecCCC
Confidence             3789999999854

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.78  E-value=2.5e-05  Score=55.80  Aligned_cols=75  Identities=19%  Similarity=0.205  Sum_probs=52.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +|.|+|.|+ |.+|..+|+.|+++|++  |++.+|+.++++.+.+..    ........+..+.......+.       .
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~--V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i~-------~   67 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIK--VTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------K   67 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCE--EEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCE--EEEEECChHHHHHHHhcc----cccccccccccchhhhHhhhh-------c
Confidence            689999987 99999999999999997  999999998766543322    233344445555555544433       4


Q ss_pred             ccEEEECcc
Q 028056          108 LNLLINASG  116 (214)
Q Consensus       108 vd~lv~nag  116 (214)
                      .|.++....
T Consensus        68 ~~~~i~~~~   76 (182)
T d1e5qa1          68 HDLVISLIP   76 (182)
T ss_dssp             SSEEEECSC
T ss_pred             cceeEeecc
Confidence            566666554

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=2.2e-05  Score=56.40  Aligned_cols=79  Identities=20%  Similarity=0.242  Sum_probs=52.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +|.+|||+||+|++|...+......|++  |+.+++++++.+.+    .+.+..- .  .|.++.+-.+++.+...  ..
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~--vi~~~~~~~~~~~~----~~~Ga~~-v--i~~~~~~~~~~i~~~t~--~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLK--ILGTAGTEEGQKIV----LQNGAHE-V--FNHREVNYIDKIKKYVG--EK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHH----HHTTCSE-E--EETTSTTHHHHHHHHHC--TT
T ss_pred             CCCEEEEEeccccccccccccccccCcc--cccccccccccccc----cccCccc-c--cccccccHHHHhhhhhc--cC
Confidence            5789999999999999999888888997  88888776544333    2334322 2  36666543333333221  13


Q ss_pred             CccEEEECcc
Q 028056          107 SLNLLINASG  116 (214)
Q Consensus       107 ~vd~lv~nag  116 (214)
                      .+|+++.+.|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            5899999887

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.72  E-value=8.9e-06  Score=59.00  Aligned_cols=80  Identities=15%  Similarity=0.156  Sum_probs=53.5

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +|.+|||+||+|++|...+.-....|++  ||.+++++++.+.+    .+.+....   .|-.+++..+++.+...  ..
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~--vi~~~~~~~~~~~~----~~~Ga~~v---i~~~~~~~~~~~~~~~~--~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCK--VVGAAGSDEKIAYL----KQIGFDAA---FNYKTVNSLEEALKKAS--PD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCE--EEEEESSHHHHHHH----HHTTCSEE---EETTSCSCHHHHHHHHC--TT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCE--EEEeCCCHHHHHHH----Hhhhhhhh---cccccccHHHHHHHHhh--cC
Confidence            4899999999999999999877888886  99888877654332    23333322   24444443333333321  23


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|+++++.|.
T Consensus        98 Gvd~v~D~vG~  108 (182)
T d1v3va2          98 GYDCYFDNVGG  108 (182)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCceeEEecCc
Confidence            69999999973

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.70  E-value=2.1e-05  Score=57.34  Aligned_cols=86  Identities=14%  Similarity=0.113  Sum_probs=54.7

Q ss_pred             CcEEEE-ecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH-Hc
Q 028056           28 GGVSLV-QGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE-KY  105 (214)
Q Consensus        28 ~k~vlI-tG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~  105 (214)
                      |.+++| +||+|++|...+.-....|++  ||.+.++.+..++..+.+.+.+....+. .|-.+..+....+.++.+ ..
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~--vI~~v~~~~~~~~~~~~~~~lGad~vi~-~~~~~~~~~~~~v~~~~~~~g  105 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFN--SISVIRDRPNLDEVVASLKELGATQVIT-EDQNNSREFGPTIKEWIKQSG  105 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCE--EEEEECCCTTHHHHHHHHHHHTCSEEEE-HHHHHCGGGHHHHHHHHHHHT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCe--EEEEEecccccchHHhhhhhccccEEEe-ccccchhHHHHHHHHHHhhcc
Confidence            445555 799999999999777778997  8888888877666555555555543322 221112223333344433 34


Q ss_pred             CCccEEEECcc
Q 028056          106 GSLNLLINASG  116 (214)
Q Consensus       106 ~~vd~lv~nag  116 (214)
                      +.+|+++++.|
T Consensus       106 ~~vdvv~D~vg  116 (189)
T d1gu7a2         106 GEAKLALNCVG  116 (189)
T ss_dssp             CCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            57999999987

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.58  E-value=0.00018  Score=53.78  Aligned_cols=80  Identities=11%  Similarity=0.156  Sum_probs=53.9

Q ss_pred             ccccCcEEEEecC----------------CCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEec
Q 028056           24 VKWKGGVSLVQGA----------------SRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLD   87 (214)
Q Consensus        24 ~~l~~k~vlItG~----------------s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D   87 (214)
                      -+|+|+.||||+|                ||.+|.++|+++..+|++  |.++.......         .+..+..+  .
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~--V~li~g~~~~~---------~p~~~~~~--~   68 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGAN--VTLVSGPVSLP---------TPPFVKRV--D   68 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCE--EEEEECSCCCC---------CCTTEEEE--E
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCc--hhhhhcccccC---------cccccccc--e
Confidence            3688999999986                788999999999999998  66655433210         12233333  3


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECccccC
Q 028056           88 LTVESTIEASAKSIKEKYGSLNLLINASGILS  119 (214)
Q Consensus        88 l~~~~~v~~~~~~~~~~~~~vd~lv~nag~~~  119 (214)
                      +.+.++.   .+.+.+.+...|++|++|++..
T Consensus        69 ~~t~~~m---~~~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          69 VMTALEM---EAAVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             CCSHHHH---HHHHHHHGGGCSEEEECCBCCS
T ss_pred             ehhhHHH---HHHHHhhhccceeEeeeechhh
Confidence            4444444   3444444557899999998864

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.58  E-value=2.6e-05  Score=48.34  Aligned_cols=42  Identities=26%  Similarity=0.294  Sum_probs=36.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~   70 (214)
                      ++.+++|+||+||.|...+......|++  |+.+++++++.+.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~--Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQ--VVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCC--EEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCe--EEEEECCHHHHHHH
Confidence            6789999999999999999877888997  99999988775543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.52  E-value=3.2e-05  Score=55.78  Aligned_cols=77  Identities=16%  Similarity=0.179  Sum_probs=52.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  105 (214)
                      +|.+|||+||+|++|..++......|++  ++++++++++.+    .+.+.+... .  .|-.+++-.    +++++.. 
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~--vi~~~~~~~~~~----~l~~~Ga~~-v--i~~~~~~~~----~~v~~~t~   91 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGAR--IYTTAGSDAKRE----MLSRLGVEY-V--GDSRSVDFA----DEILELTD   91 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCE--EEEEESSHHHHH----HHHTTCCSE-E--EETTCSTHH----HHHHHHTT
T ss_pred             CCCEEEEECCCCCcccccchhhcccccc--ceeeeccccccc----ccccccccc-c--ccCCccCHH----HHHHHHhC
Confidence            4789999999999999999888888987  888887765433    333334332 2  344444332    3333332 


Q ss_pred             -CCccEEEECcc
Q 028056          106 -GSLNLLINASG  116 (214)
Q Consensus       106 -~~vd~lv~nag  116 (214)
                       ..+|+++.+.|
T Consensus        92 ~~g~d~v~d~~g  103 (183)
T d1pqwa_          92 GYGVDVVLNSLA  103 (183)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCEEEEEeccc
Confidence             35999999997

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.51  E-value=2.4e-05  Score=56.26  Aligned_cols=80  Identities=20%  Similarity=0.214  Sum_probs=54.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+|+|+||+|++|..++.-....|++  |+.+++++++.+.+.+    .+.. +.  .|-++++-.+++ .++- ...
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~--Vi~~~~s~~k~~~~~~----lGa~-~v--i~~~~~d~~~~v-~~~t-~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAK--LIGTVGTAQKAQSALK----AGAW-QV--INYREEDLVERL-KEIT-GGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHHH----HTCS-EE--EETTTSCHHHHH-HHHT-TTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCe--EeecccchHHHHHHHh----cCCe-EE--EECCCCCHHHHH-HHHh-CCC
Confidence            3789999999999999999888888986  9999998876554332    2332 12  366654433332 2221 124


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|+++.+.|.
T Consensus        97 g~d~v~d~~g~  107 (179)
T d1qora2          97 KVRVVYDSVGR  107 (179)
T ss_dssp             CEEEEEECSCG
T ss_pred             CeEEEEeCccH
Confidence            68999998873

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.45  E-value=0.00015  Score=52.22  Aligned_cols=81  Identities=22%  Similarity=0.241  Sum_probs=53.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  105 (214)
                      .|.+|+|+|+ |++|...+......|+. .|+++++++++++.+.+    .+... .+  |..+.+ ..+..+++.+.. 
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~-~Vi~~~~~~~~~~~a~~----lGa~~-vi--~~~~~~-~~~~~~~i~~~~~   97 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAE-NVIVIAGSPNRLKLAEE----IGADL-TL--NRRETS-VEERRKAIMDITH   97 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBS-EEEEEESCHHHHHHHHH----TTCSE-EE--ETTTSC-HHHHHHHHHHHTT
T ss_pred             CCCEEEEECC-Cccchhheecccccccc-ccccccccccccccccc----ccceE-EE--eccccc-hHHHHHHHHHhhC
Confidence            4789999987 89999999888888985 69999998877654332    33322 22  333322 222233343322 


Q ss_pred             -CCccEEEECccc
Q 028056          106 -GSLNLLINASGI  117 (214)
Q Consensus       106 -~~vd~lv~nag~  117 (214)
                       ..+|++|.+.|.
T Consensus        98 ~~g~Dvvid~vG~  110 (182)
T d1vj0a2          98 GRGADFILEATGD  110 (182)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             CCCceEEeecCCc
Confidence             248999999985

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.45  E-value=8.7e-05  Score=52.77  Aligned_cols=82  Identities=22%  Similarity=0.202  Sum_probs=54.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  105 (214)
                      .|.+++|+| +|++|...+..+...|++  |+++++++++++.+.+    .+.... +..|-.+ ++.....+++.+.. 
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~--vi~v~~~~~r~~~a~~----~ga~~~-~~~~~~~-~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAF--VVCTARSPRRLEVAKN----CGADVT-LVVDPAK-EEESSIIERIRSAIG   96 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHH----TTCSEE-EECCTTT-SCHHHHHHHHHHHSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhccc--ccccchHHHHHHHHHH----cCCcEE-Eeccccc-cccchhhhhhhcccc
Confidence            467899997 689999999888888886  9999998876554333    233222 2223222 22344455555544 


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      ..+|++|.++|.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence            368999999984

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=0.00027  Score=50.21  Aligned_cols=81  Identities=19%  Similarity=0.160  Sum_probs=54.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY-  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  105 (214)
                      .|.+|+|.|+ |++|...+..+...|++ .|++.++++++++.+.+    .+.. +.+..+-.+.....   +.+.... 
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~-~Vi~~d~~~~rl~~a~~----~Ga~-~~~~~~~~~~~~~~---~~~~~~~g   95 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAA-QVVVTDLSATRLSKAKE----IGAD-LVLQISKESPQEIA---RKVEGQLG   95 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHHH----TTCS-EEEECSSCCHHHHH---HHHHHHHT
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCc-eEEeccCCHHHHHHHHH----hCCc-cccccccccccccc---ccccccCC
Confidence            3678999986 99999999888889996 69999998876554332    2332 23333334444443   3333333 


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      ..+|++|.+.|.
T Consensus        96 ~g~Dvvid~~G~  107 (171)
T d1pl8a2          96 CKPEVTIECTGA  107 (171)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCceEEEeccCC
Confidence            368999999985

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.43  E-value=6.8e-05  Score=53.60  Aligned_cols=77  Identities=23%  Similarity=0.165  Sum_probs=54.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .+++||.|+|.|+ ||-+++++..|.+.|.+  |.++.|+.++.+.+.+.....+ .+..  .+..+.            
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~--i~I~nRt~~ka~~l~~~~~~~~-~~~~--~~~~~~------------   75 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCA--VTITNRTVSRAEELAKLFAHTG-SIQA--LSMDEL------------   75 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSHHHHHHHHHHTGGGS-SEEE--CCSGGG------------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceE--EEeccchHHHHHHHHHHHhhcc-cccc--cccccc------------
Confidence            5678999999997 78899999999999986  9999999887666554443322 2222  222211            


Q ss_pred             HcCCccEEEECcccc
Q 028056          104 KYGSLNLLINASGIL  118 (214)
Q Consensus       104 ~~~~vd~lv~nag~~  118 (214)
                      .....|++||+....
T Consensus        76 ~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          76 EGHEFDLIINATSSG   90 (170)
T ss_dssp             TTCCCSEEEECCSCG
T ss_pred             cccccceeecccccC
Confidence            124689999998553

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.40  E-value=6.6e-05  Score=51.31  Aligned_cols=72  Identities=18%  Similarity=0.200  Sum_probs=53.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      .|+|.|+ |.+|..+++.|.+.|..  |++.+.+++..+++.+.   .  .+.++.+|.++++.++++-      ....|
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~--v~vid~d~~~~~~~~~~---~--~~~vi~Gd~~~~~~l~~~~------i~~a~   67 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHD--IVLIDIDKDICKKASAE---I--DALVINGDCTKIKTLEDAG------IEDAD   67 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHH---C--SSEEEESCTTSHHHHHHTT------TTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCC--cceecCChhhhhhhhhh---h--hhhhccCcccchhhhhhcC------hhhhh
Confidence            5789998 89999999999999997  99999988765543322   1  4668889999998776541      13567


Q ss_pred             EEEECc
Q 028056          110 LLINAS  115 (214)
Q Consensus       110 ~lv~na  115 (214)
                      .++...
T Consensus        68 ~vv~~t   73 (132)
T d1lssa_          68 MYIAVT   73 (132)
T ss_dssp             EEEECC
T ss_pred             hhcccC
Confidence            776644

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.38  E-value=7.9e-05  Score=53.66  Aligned_cols=78  Identities=17%  Similarity=0.150  Sum_probs=50.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +|.+|||+||+||.|...+.-....|++  |+.+++++++.+.+.+    .+.... +  |-.+  ...+....+  .-+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~--Viat~~s~~k~~~~~~----lGa~~v-i--~~~~--~~~~~~~~~--~~~   97 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYT--VEASTGKAAEHDYLRV----LGAKEV-L--ARED--VMAERIRPL--DKQ   97 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCC--EEEEESCTTCHHHHHH----TTCSEE-E--ECC-----------C--CSC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCc--eEEecCchHHHHHHHh----ccccee-e--ecch--hHHHHHHHh--hcc
Confidence            4789999999999999999777788998  9999998887554433    333322 2  3221  112222211  224


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|+++.+.|.
T Consensus        98 gvD~vid~vgg  108 (176)
T d1xa0a2          98 RWAAAVDPVGG  108 (176)
T ss_dssp             CEEEEEECSTT
T ss_pred             CcCEEEEcCCc
Confidence            79999999984

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.33  E-value=9.4e-05  Score=52.63  Aligned_cols=81  Identities=11%  Similarity=0.122  Sum_probs=54.2

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+.+++|.|++|++|..++..+...|+. .|++.++++++.+.+.+    .+.. ..+  |.++.+..++..+...  .+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~-~V~~~~~~~~~~~~~~~----~Ga~-~~i--~~~~~~~~~~~~~~~~--~~   96 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKR----AGAD-YVI--NASMQDPLAEIRRITE--SK   96 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHH----HTCS-EEE--ETTTSCHHHHHHHHTT--TS
T ss_pred             CCCEEEEEeccccceeeeeecccccccc-cccccccchhhHHHHHH----cCCc-eee--ccCCcCHHHHHHHHhh--cc
Confidence            4689999999999999999988888976 68999988766544332    2332 222  4444443333332221  23


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|.++|.
T Consensus        97 ~~d~vid~~g~  107 (170)
T d1jvba2          97 GVDAVIDLNNS  107 (170)
T ss_dssp             CEEEEEESCCC
T ss_pred             cchhhhccccc
Confidence            58999999985

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.30  E-value=0.0001  Score=52.66  Aligned_cols=74  Identities=20%  Similarity=0.271  Sum_probs=49.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +|++|+|+||+|++|...+......|++  |+.+++++++.+.+.+    .+....   .|..+.      .+++. ...
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~--vi~~~~~~~~~~~~~~----lGa~~~---i~~~~~------~~~~~-~~~   90 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLR--VLAAASRPEKLALPLA----LGAEEA---ATYAEV------PERAK-AWG   90 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCE--EEEEESSGGGSHHHHH----TTCSEE---EEGGGH------HHHHH-HTT
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccc--cccccccccccccccc----ccccee---eehhhh------hhhhh-ccc
Confidence            5889999999999999999877778986  8888888766554332    233222   233221      12222 234


Q ss_pred             CccEEEECcc
Q 028056          107 SLNLLINASG  116 (214)
Q Consensus       107 ~vd~lv~nag  116 (214)
                      .+|+++.+.|
T Consensus        91 g~D~v~d~~G  100 (171)
T d1iz0a2          91 GLDLVLEVRG  100 (171)
T ss_dssp             SEEEEEECSC
T ss_pred             cccccccccc
Confidence            6999999776

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.30  E-value=0.00097  Score=46.11  Aligned_cols=120  Identities=15%  Similarity=0.105  Sum_probs=67.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      .+.|+||+|.+|.++|..++.+|.-..+++.+.++.+.+ ..++..  .........-+ ...+..+.+       ..-|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~-a~Dl~~--~~~~~~~~~~~-~~~~~~~~~-------~~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-AADLSH--IETRATVKGYL-GPEQLPDCL-------KGCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-HHHHTT--SSSSCEEEEEE-SGGGHHHHH-------TTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh-hHHHhh--hhhhcCCCeEE-cCCChHHHh-------CCCC
Confidence            588999999999999999999987447999998753322 222211  11111111111 222222222       3689


Q ss_pred             EEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          110 LLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       110 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      ++|..+|...        .+-+  +.   .+.++.|+    .+.+.+.+.+.+....     +.++++|....
T Consensus        71 ivVitag~~~--------~~g~--sR---~~ll~~N~----~i~~~i~~~i~~~~p~-----~iiivvtNPvD  121 (144)
T d1mlda1          71 VVVIPAGVPR--------KPGM--TR---DDLFNTNA----TIVATLTAACAQHCPD-----AMICIISNPVN  121 (144)
T ss_dssp             EEEECCSCCC--------CTTC--CG---GGGHHHHH----HHHHHHHHHHHHHCTT-----SEEEECSSCHH
T ss_pred             EEEECCCcCC--------CCCC--Cc---chHHHHHH----HHHHHHHHHHHhcCCC-----eEEEEecCchh
Confidence            9999999753        1111  11   12244444    4445555555554332     37777776443

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.29  E-value=0.00023  Score=50.85  Aligned_cols=82  Identities=17%  Similarity=0.205  Sum_probs=53.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +|.+|+|.|+ +|+|...+..+...|+. .|++.++++++.+...+    .+....+...|-  .+.+.+..++...  +
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~-~Vi~~~~~~~k~~~a~~----~Ga~~~i~~~~~--~~~~~~~~~~~~~--~   97 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAA-RIIGVDINKDKFAKAKE----VGATECVNPQDY--KKPIQEVLTEMSN--G   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHH----TTCSEEECGGGC--SSCHHHHHHHHTT--S
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCc-eEEeecCcHHHHHHHHH----hCCeeEEecCCc--hhHHHHHHHHHhc--C
Confidence            4789999999 68999999999999987 69999998877554332    232221111121  2233333443322  4


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|++|.+.|..
T Consensus        98 G~D~vid~~G~~  109 (176)
T d2jhfa2          98 GVDFSFEVIGRL  109 (176)
T ss_dssp             CBSEEEECSCCH
T ss_pred             CCCEEEecCCch
Confidence            789999999853

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.15  E-value=0.00032  Score=49.81  Aligned_cols=44  Identities=16%  Similarity=0.159  Sum_probs=36.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD   72 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~   72 (214)
                      ++|.|+|.|+ ||.+++++..|.+.|++ .|.+++|+.++.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~-~I~I~nR~~~ka~~L~~   59 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFE-KLKIYARNVKTGQYLAA   59 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCC-CEEEECSCHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCC-EEEEecccHHHHHHHHH
Confidence            5788999987 79999999999999986 59999999876555433

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.14  E-value=0.00018  Score=51.41  Aligned_cols=77  Identities=17%  Similarity=0.198  Sum_probs=53.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .++++|.++|.|+ ||.+++++..|.+.+.  .|.++.|+.++++.+.+..... .++..+..|-.              
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~--~i~I~nR~~~~a~~l~~~~~~~-~~~~~~~~~~~--------------   75 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQ--NIVLANRTFSKTKELAERFQPY-GNIQAVSMDSI--------------   75 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTC--EEEEEESSHHHHHHHHHHHGGG-SCEEEEEGGGC--------------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCc--eeeeccchHHHHHHHHHHHhhc-cccchhhhccc--------------
Confidence            4678999999977 6789999999998654  5999999987766655554432 23444433311              


Q ss_pred             HcCCccEEEECcccc
Q 028056          104 KYGSLNLLINASGIL  118 (214)
Q Consensus       104 ~~~~vd~lv~nag~~  118 (214)
                      .....|++||+....
T Consensus        76 ~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 PLQTYDLVINATSAG   90 (171)
T ss_dssp             CCSCCSEEEECCCC-
T ss_pred             cccccceeeeccccc
Confidence            124789999998654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.12  E-value=0.00031  Score=50.31  Aligned_cols=81  Identities=14%  Similarity=0.157  Sum_probs=53.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHH-HHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVEST-IEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~  105 (214)
                      +|.+|+|+|+ ||+|...+..+...|+. +||++++++++++...+.    +... ++  |-.+.+. .+...+..  ..
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~-~Vi~vd~~~~kl~~Ak~~----GA~~-~i--n~~~~~~~~~~~~~~~--~g   97 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGAS-RIIGIDLNKDKFEKAMAV----GATE-CI--SPKDSTKPISEVLSEM--TG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHHH----TCSE-EE--CGGGCSSCHHHHHHHH--HT
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCc-eEEEecCcHHHHHHHHhc----CCcE-EE--CccccchHHHHHHHHh--cc
Confidence            4789999986 89999999999999986 699999999876644333    3322 22  2222211 22222222  12


Q ss_pred             CCccEEEECcccc
Q 028056          106 GSLNLLINASGIL  118 (214)
Q Consensus       106 ~~vd~lv~nag~~  118 (214)
                      ..+|++|.+.|..
T Consensus        98 ~G~d~vi~~~g~~  110 (176)
T d1d1ta2          98 NNVGYTFEVIGHL  110 (176)
T ss_dssp             SCCCEEEECSCCH
T ss_pred             ccceEEEEeCCch
Confidence            4699999999853

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.10  E-value=0.00023  Score=51.53  Aligned_cols=79  Identities=11%  Similarity=0.146  Sum_probs=48.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      +.+|||+||+||+|...+.-....|+. +|+.++.++++...   ...+.+.. ..  .|..+++ +.+.++++..  ..
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~-~vi~~~~~~e~~~~---l~~~~gad-~v--i~~~~~~-~~~~~~~~~~--~G  100 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCS-RVVGICGTQEKCLF---LTSELGFD-AA--VNYKTGN-VAEQLREACP--GG  100 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCS-EEEEEESSHHHHHH---HHHHSCCS-EE--EETTSSC-HHHHHHHHCT--TC
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCc-ceecccchHHHHhh---hhhcccce-EE--eeccchh-HHHHHHHHhc--cC
Confidence            479999999999999999766668887 56656655443222   22223332 22  2444443 3333333322  35


Q ss_pred             ccEEEECcc
Q 028056          108 LNLLINASG  116 (214)
Q Consensus       108 vd~lv~nag  116 (214)
                      +|+++.+.|
T Consensus       101 vDvv~D~vG  109 (187)
T d1vj1a2         101 VDVYFDNVG  109 (187)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEecCC
Confidence            999999997

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.10  E-value=0.00017  Score=49.12  Aligned_cols=73  Identities=18%  Similarity=0.176  Sum_probs=51.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |.++|.|. |.+|..+|+.|.+.|..  |++++.+++..+++.+    .  ....+.+|.++++.++++-      ....
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~--vvvid~d~~~~~~~~~----~--~~~~~~gd~~~~~~l~~a~------i~~a   65 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHE--VLAVDINEEKVNAYAS----Y--ATHAVIANATEENELLSLG------IRNF   65 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCC--CEEEESCHHHHHHTTT----T--CSEEEECCTTCTTHHHHHT------GGGC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCe--EEEecCcHHHHHHHHH----h--CCcceeeecccchhhhccC------Cccc
Confidence            46778866 78999999999999998  8889988876554322    1  2345678999988766441      1245


Q ss_pred             cEEEECcc
Q 028056          109 NLLINASG  116 (214)
Q Consensus       109 d~lv~nag  116 (214)
                      |.+|-..+
T Consensus        66 ~~vi~~~~   73 (134)
T d2hmva1          66 EYVIVAIG   73 (134)
T ss_dssp             SEEEECCC
T ss_pred             cEEEEEcC
Confidence            77766654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.04  E-value=0.0046  Score=43.01  Aligned_cols=127  Identities=12%  Similarity=0.083  Sum_probs=70.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc-cchhh---cCCCceeEEEecCCCHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKN---RFPERLDVLQLDLTVESTIEASAK   99 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~-~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~   99 (214)
                      +.-+.+++.|.|+ |.+|..+|..++..+.. -+++.+.+++.++.. .++..   ..+.+...... -..++++     
T Consensus         3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~-el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-~~~~~~~-----   74 (154)
T d1pzga1           3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELA-DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-YSYEAAL-----   74 (154)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-CSHHHHH-----
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCc-eEEEEEeccccchhHHHHHhhhccccCCeeEEecc-Cchhhhh-----
Confidence            4446678888897 99999999999988865 599999988765432 22211   11222222211 1111111     


Q ss_pred             HHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeec
Q 028056          100 SIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSA  179 (214)
Q Consensus       100 ~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss  179 (214)
                            ..-|++|..+|....|     ..+..+.+..+   .+    .....+++.+++.+.+....     +.++++|.
T Consensus        75 ------~~adiVvitag~~~~~-----g~~~~~~tR~~---l~----~~n~~iv~~i~~~i~~~~p~-----aiviivsN  131 (154)
T d1pzga1          75 ------TGADCVIVTAGLTKVP-----GKPDSEWSRND---LL----PFNSKIIREIGQNIKKYCPK-----TFIIVVTN  131 (154)
T ss_dssp             ------TTCSEEEECCSCSSCT-----TCCGGGCCGGG---GH----HHHHHHHHHHHHHHHHHCTT-----CEEEECCS
T ss_pred             ------cCCCeEEEecccccCC-----CCCCcccchhh---hh----hhhHHHHHHHHHHHHhcCCC-----cEEEEeCC
Confidence                  2679999999976421     11111122211   22    23444566666666554433     37777776


Q ss_pred             Cc
Q 028056          180 RV  181 (214)
Q Consensus       180 ~~  181 (214)
                      ..
T Consensus       132 Pv  133 (154)
T d1pzga1         132 PL  133 (154)
T ss_dssp             SH
T ss_pred             cH
Confidence            43

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.01  E-value=0.00014  Score=52.10  Aligned_cols=81  Identities=15%  Similarity=0.128  Sum_probs=51.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+|+|.|+ |++|...+......|+. .|+++++++++.+.+.+    .+.. ++  .|..+++..++ +.++.+ ..
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~-~Vi~~d~~~~r~~~a~~----lGa~-~~--i~~~~~~~~~~-v~~~t~-g~   95 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAG-RIIGVGSRPICVEAAKF----YGAT-DI--LNYKNGHIEDQ-VMKLTN-GK   95 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCS-CEEEECCCHHHHHHHHH----HTCS-EE--ECGGGSCHHHH-HHHHTT-TS
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhccccc-ccccccchhhhHHHHHh----hCcc-cc--ccccchhHHHH-HHHHhh-cc
Confidence            4778999976 89999999888888885 58999988766543332    2321 22  24444332222 222211 12


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|++|.++|..
T Consensus        96 G~D~vid~~g~~  107 (174)
T d1jqba2          96 GVDRVIMAGGGS  107 (174)
T ss_dssp             CEEEEEECSSCT
T ss_pred             CcceEEEccCCH
Confidence            499999999853

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.00  E-value=0.00056  Score=48.55  Aligned_cols=80  Identities=16%  Similarity=0.174  Sum_probs=51.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCC-HHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV-ESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~  105 (214)
                      .|.+|+|.|+ ||+|...+..+...|+. .|+.+++++++.+.+.    +.+... ++  |..+ .+.+.+.+++..  .
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~-~vi~~~~~~~k~~~ak----~lGa~~-~i--~~~~~~~~~~~~~~~~~--~   96 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGAS-RIIGVDINKDKFARAK----EFGATE-CI--NPQDFSKPIQEVLIEMT--D   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSCGGGHHHHH----HHTCSE-EE--CGGGCSSCHHHHHHHHT--T
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcC-ceEEEcccHHHHHHHH----HhCCcE-EE--eCCchhhHHHHHHHHHc--C
Confidence            4789999998 58999999888889987 6888888776654333    223322 22  2221 223344444332  2


Q ss_pred             CCccEEEECccc
Q 028056          106 GSLNLLINASGI  117 (214)
Q Consensus       106 ~~vd~lv~nag~  117 (214)
                      +.+|++|.+.|.
T Consensus        97 ~g~D~vid~~G~  108 (176)
T d2fzwa2          97 GGVDYSFECIGN  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEeeecCCC
Confidence            469999999984

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.96  E-value=0.0018  Score=44.82  Aligned_cols=84  Identities=11%  Similarity=0.020  Sum_probs=54.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++.+-|++.|.||.|.||..+|+.|.+.|++  |.+.++++.....   ... ..........+   ...+...+.++..
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~--V~~~d~~~~~~~~---~~~-~~~~~v~~~~~---~~~~~~v~~~~~~   75 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYP--ISILDREDWAVAE---SIL-ANADVVIVSVP---INLTLETIERLKP   75 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCC--EEEECTTCGGGHH---HHH-TTCSEEEECSC---GGGHHHHHHHHGG
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCC--cEecccccccccc---hhh-hhccccccccc---hhhheeeeecccc
Confidence            4556689999999999999999999999998  9999998754322   111 12233333323   3455566666655


Q ss_pred             HcCCccEEEECcc
Q 028056          104 KYGSLNLLINASG  116 (214)
Q Consensus       104 ~~~~vd~lv~nag  116 (214)
                      ...+=.+++....
T Consensus        76 ~~~~~~iiiD~~S   88 (152)
T d2pv7a2          76 YLTENMLLADLTS   88 (152)
T ss_dssp             GCCTTSEEEECCS
T ss_pred             cccCCceEEEecc
Confidence            5433345555543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.95  E-value=0.00097  Score=47.56  Aligned_cols=82  Identities=15%  Similarity=0.121  Sum_probs=52.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+|+|.| .|+||...+..+...|+. .|++.++++++++..++    .+.. ..+...-.+ +.+........  .+
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~-~Vi~~d~~~~r~~~a~~----~Ga~-~~i~~~~~~-~~~~~~~~~~~--~~   97 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGAS-RIIAIDINGEKFPKAKA----LGAT-DCLNPRELD-KPVQDVITELT--AG   97 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHH----TTCS-EEECGGGCS-SCHHHHHHHHH--TS
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCc-eeeeeccchHHHHHHHH----hCCC-cccCCccch-hhhhhhHhhhh--cC
Confidence            478999997 599999999988889997 68889988876543332    2332 222211111 22333333332  24


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|++|.++|..
T Consensus        98 G~d~vie~~G~~  109 (174)
T d1e3ia2          98 GVDYSLDCAGTA  109 (174)
T ss_dssp             CBSEEEESSCCH
T ss_pred             CCcEEEEecccc
Confidence            799999999853

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.94  E-value=0.00031  Score=50.01  Aligned_cols=44  Identities=30%  Similarity=0.343  Sum_probs=36.1

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD   72 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~   72 (214)
                      ++.+|||+||+||+|...+.-....|++  ||.+++++++.+.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~--Viat~~s~~k~~~~~~   66 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYD--VVASTGNREAADYLKQ   66 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCC--EEEEESSSSTHHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCc--eEEEecCHHHHHHHHh
Confidence            4668999999999999999766678997  9999999887655433

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.89  E-value=0.00047  Score=49.14  Aligned_cols=79  Identities=16%  Similarity=0.136  Sum_probs=51.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+|+|.|+ |++|...+..+...|++ +|++.++++++++.+++    .+. .+++  |..+++ +.+.+.++.  .+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~-~v~~~~~~~~k~~~a~~----~Ga-~~~i--~~~~~~-~~~~i~~~t--~g   95 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGAS-IIIAVDIVESRLELAKQ----LGA-THVI--NSKTQD-PVAAIKEIT--DG   95 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHH----HTC-SEEE--ETTTSC-HHHHHHHHT--TS
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccc-eeeeeccHHHHHHHHHH----cCC-eEEE--eCCCcC-HHHHHHHHc--CC
Confidence            4788999987 89999999888788998 67788887766554333    232 2233  444433 322233332  24


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|++|.+.|.
T Consensus        96 g~D~vid~~G~  106 (174)
T d1f8fa2          96 GVNFALESTGS  106 (174)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEEcCCc
Confidence            79999999985

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.00057  Score=43.52  Aligned_cols=74  Identities=16%  Similarity=0.183  Sum_probs=48.5

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +++||+++|.|. |.-|.++|+.|.++|++  |.+.+.+.....  .+.+.   ....++..+.. ...    ++     
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~--v~~~D~~~~~~~--~~~~~---~~~~~~~~~~~-~~~----~~-----   63 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVT--PRVMDTRMTPPG--LDKLP---EAVERHTGSLN-DEW----LM-----   63 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCC--CEEEESSSSCTT--GGGSC---TTSCEEESBCC-HHH----HH-----
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCE--EEEeeCCcCchh--HHHHh---hccceeecccc-hhh----hc-----
Confidence            589999999998 56799999999999998  777776554211  11111   22333333321 111    22     


Q ss_pred             cCCccEEEECcccc
Q 028056          105 YGSLNLLINASGIL  118 (214)
Q Consensus       105 ~~~vd~lv~nag~~  118 (214)
                        .+|.+|...|+.
T Consensus        64 --~~d~vi~SPGi~   75 (93)
T d2jfga1          64 --AADLIVASPGIA   75 (93)
T ss_dssp             --HCSEEEECTTSC
T ss_pred             --cCCEEEECCCCC
Confidence              579999999975

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.01  Score=40.68  Aligned_cols=118  Identities=16%  Similarity=0.172  Sum_probs=62.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhc-CCCcEEEEeecCCCCccc-ccchhhcC-CCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEK-NDKGCVIATCRNPNGATG-LLDLKNRF-PERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~-g~~~~vi~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+.|+|++|.+|.++|..++.+ +.-..+++.+..+ ..+. ..++.... ......+ ..-.+.+.+           .
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~-~~~~~~~~~-----------~   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SGEDATPAL-----------E   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEE-CSSCCHHHH-----------T
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEE-EcCCCcccc-----------C
Confidence            5789999999999999988654 4322588888754 3322 22222211 1111111 122223322           2


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                      .-|++|..+|...        .+-+  +   -.+.++.|.    .+.+...+.+.+...+     ..++++|....
T Consensus        69 ~aDvvvitaG~~~--------k~g~--~---R~dl~~~N~----~i~~~v~~~i~~~~p~-----aivivvtNPvD  122 (145)
T d2cmda1          69 GADVVLISAGVRR--------KPGM--D---RSDLFNVNA----GIVKNLVQQVAKTCPK-----ACIGIITNPVN  122 (145)
T ss_dssp             TCSEEEECCSCCC--------CTTC--C---GGGGHHHHH----HHHHHHHHHHHHHCTT-----SEEEECSSSHH
T ss_pred             CCCEEEECCCccC--------CCCc--c---hhhHHHHHH----HHHHHHHHHHHhhCCC-----cEEEEccCCch
Confidence            5799999999754        1111  1   122244443    4445555555544322     37887876543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.85  E-value=0.0025  Score=44.74  Aligned_cols=124  Identities=15%  Similarity=0.143  Sum_probs=73.9

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhh---cCCCceeEEEecCCCHHHHHHH
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN---RFPERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      ....+..+.+.|.|+ |.+|..+|..++.+|.-..+++.+++++.++- ..++..   ..+........|.   +++   
T Consensus        14 ~~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~---~~~---   86 (160)
T d1i0za1          14 EEATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY---SVT---   86 (160)
T ss_dssp             SCCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG---GGG---
T ss_pred             ccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch---hhc---
Confidence            345556678888896 99999999999999974469999998765432 222211   1122222222222   222   


Q ss_pred             HHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEe
Q 028056           98 AKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANL  177 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~i  177 (214)
                              ..-|++|..||...        .+-+  +..   +.+    .....+.+.+.+.+.+...+     +.++++
T Consensus        87 --------~~adiVVitAg~~~--------~~g~--tR~---~l~----~~N~~i~~~i~~~i~~~~p~-----aiiivv  136 (160)
T d1i0za1          87 --------ANSKIVVVTAGVRQ--------QEGE--SRL---NLV----QRNVNVFKFIIPQIVKYSPD-----CIIIVV  136 (160)
T ss_dssp             --------TTCSEEEECCSCCC--------CTTC--CGG---GGH----HHHHHHHHHHHHHHHHHCTT-----CEEEEC
T ss_pred             --------ccccEEEEecCCcc--------ccCc--chH---HHH----HHHHHHHHHHHHHHHhcCCC-----cEEEEe
Confidence                    36799999999754        1111  111   112    33455667777777665433     378888


Q ss_pred             ecCcc
Q 028056          178 SARVG  182 (214)
Q Consensus       178 ss~~~  182 (214)
                      |....
T Consensus       137 tNPvD  141 (160)
T d1i0za1         137 SNPVD  141 (160)
T ss_dssp             SSSHH
T ss_pred             CCchH
Confidence            76443

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.83  E-value=0.00072  Score=48.23  Aligned_cols=81  Identities=12%  Similarity=0.157  Sum_probs=52.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHH-HHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVES-TIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~  105 (214)
                      .|.+|+|.|+ |++|...+..+...|+. .|+..++++++++...+    .+... ++  |..+.+ .+.+.....  ..
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~-~Vi~~d~~~~kl~~a~~----lGa~~-~i--~~~~~d~~~~~~~~~~--~~   95 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGAS-RIIGVGTHKDKFPKAIE----LGATE-CL--NPKDYDKPIYEVICEK--TN   95 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSCGGGHHHHHH----TTCSE-EE--CGGGCSSCHHHHHHHH--TT
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCc-eeeccCChHHHHHHHHH----cCCcE-EE--cCCCchhHHHHHHHHh--cC
Confidence            4789999985 89999999999899987 79999998877654432    33322 22  322222 122222222  12


Q ss_pred             CCccEEEECcccc
Q 028056          106 GSLNLLINASGIL  118 (214)
Q Consensus       106 ~~vd~lv~nag~~  118 (214)
                      +.+|++|-+.|..
T Consensus        96 ~G~d~vid~~g~~  108 (174)
T d1p0fa2          96 GGVDYAVECAGRI  108 (174)
T ss_dssp             SCBSEEEECSCCH
T ss_pred             CCCcEEEEcCCCc
Confidence            4689999998853

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.79  E-value=0.0031  Score=41.38  Aligned_cols=39  Identities=15%  Similarity=0.190  Sum_probs=33.0

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      .++++||+++|.||+. +|..-++.|++.|++  |++.+...
T Consensus         7 ~l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~--v~v~~~~~   45 (113)
T d1pjqa1           7 FCQLRDRDCLIVGGGD-VAERKARLLLEAGAR--LTVNALTF   45 (113)
T ss_dssp             EECCBTCEEEEECCSH-HHHHHHHHHHHTTBE--EEEEESSC
T ss_pred             EEEeCCCEEEEECCCH-HHHHHHHHHHHCCCe--EEEEeccC
Confidence            3689999999999875 999999999999997  76666543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.76  E-value=0.00091  Score=47.41  Aligned_cols=80  Identities=16%  Similarity=0.150  Sum_probs=51.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+++|.|+ |++|...+..+...|+. +|+.+++++++++.+.    +.+.. +++  |-. .+.+++..+..  ...
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~-~vv~~~~~~~k~~~~~----~~ga~-~~i--~~~-~~~~~~~~~~~--~~~   99 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAE----RLGAD-HVV--DAR-RDPVKQVMELT--RGR   99 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHH----HTTCS-EEE--ETT-SCHHHHHHHHT--TTC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCc-ccccccchhHHHHHHh----hcccc-eee--cCc-ccHHHHHHHhh--CCC
Confidence            4789999885 99999999888888987 6888888876544333    23332 233  332 23333333322  123


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|++|.++|..
T Consensus       100 g~d~vid~~g~~  111 (172)
T d1h2ba2         100 GVNVAMDFVGSQ  111 (172)
T ss_dssp             CEEEEEESSCCH
T ss_pred             CceEEEEecCcc
Confidence            599999999853

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.76  E-value=0.0025  Score=44.13  Aligned_cols=79  Identities=19%  Similarity=0.284  Sum_probs=51.6

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhc---CCCceeEEEecCCCHHHHHHHHHHH
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNR---FPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      -.++.+.|.|+ |.+|..+|..++..|.-..|++++++++.++. ..++...   ....+.....|.   ++        
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~--------   71 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD--------   71 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG--------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH--------
Confidence            34678888896 99999999999998864369999998866443 2222211   122333333332   22        


Q ss_pred             HHHcCCccEEEECccccC
Q 028056          102 KEKYGSLNLLINASGILS  119 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~  119 (214)
                         ...-|++|.++|...
T Consensus        72 ---l~daDvvvitag~~~   86 (148)
T d1ldna1          72 ---CRDADLVVICAGANQ   86 (148)
T ss_dssp             ---TTTCSEEEECCSCCC
T ss_pred             ---hccceeEEEeccccc
Confidence               235799999999754

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.74  E-value=0.00047  Score=49.49  Aligned_cols=41  Identities=24%  Similarity=0.268  Sum_probs=34.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      ++.++||+||+||+|...+.-....|++  ||.+++++++.+.
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~--Via~~~~~~k~~~   71 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQ--VVAVSGRESTHEY   71 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCC--EEEEESCGGGHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCC--eEEEecchhHHHH
Confidence            4569999999999999999777778998  9999998876543

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.74  E-value=0.0016  Score=45.08  Aligned_cols=117  Identities=13%  Similarity=0.143  Sum_probs=65.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchh--hcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLK--NRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~--~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++.|.|+ |.+|..+|..++.+|.-..|+++|++++..+. ..++.  ............|.   ++           
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~-----------   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD-----------   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH-----------
Confidence            457788885 99999999999999853259999998865432 21221  11122333444443   21           


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      ...-|++|..+|...        .+-  .   +-.+.+..|    ..+.+...+.+.+....     +.++++|...
T Consensus        70 ~~~adivvitag~~~--------~~g--~---~r~~l~~~N----~~i~~~~~~~i~~~~p~-----aivivvtNPv  124 (146)
T d1ez4a1          70 CKDADLVVITAGAPQ--------KPG--E---SRLDLVNKN----LNILSSIVKPVVDSGFD-----GIFLVAANPV  124 (146)
T ss_dssp             GTTCSEEEECCCC-----------------------CHHHH----HHHHHHHHHHHHHTTCC-----SEEEECSSSH
T ss_pred             hccccEEEEeccccc--------CCC--C---CHHHHHHHH----HHHHHHHHHHHhhcCCC-----cEEEEeCCcc
Confidence            236799999998653        111  1   111122333    45566666666655433     3777777543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.60  E-value=0.0032  Score=44.11  Aligned_cols=124  Identities=15%  Similarity=0.135  Sum_probs=72.8

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhh---cCCCceeEEEecCCCHHHHHH
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN---RFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~---~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      .+...++...+.|.|+ |.+|..+|..++..|.-.-+++.+++++.++. ..++..   ..+........|.   ++   
T Consensus        12 ~~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~~---   84 (159)
T d2ldxa1          12 VPEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---NV---   84 (159)
T ss_dssp             SSCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---GG---
T ss_pred             cccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---hh---
Confidence            3344566667888886 99999999999999874469999988765432 222221   1122222222232   22   


Q ss_pred             HHHHHHHHcCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEE
Q 028056           97 SAKSIKEKYGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVAN  176 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~  176 (214)
                              ...-|++|..||....        +-+  +..   +.    +.....+.+.+.+.+.+...+     +.+++
T Consensus        85 --------~~~adivvitag~~~~--------~~~--~R~---dl----l~~N~~i~~~i~~~i~~~~p~-----~iviv  134 (159)
T d2ldxa1          85 --------SANSKLVIITAGARMV--------SGQ--TRL---DL----LQRNVAIMKAIVPGVIQNSPD-----CKIIV  134 (159)
T ss_dssp             --------GTTEEEEEECCSCCCC--------TTT--CSS---CT----THHHHHHHHHHTTTHHHHSTT-----CEEEE
T ss_pred             --------hccccEEEEecccccC--------CCC--CHH---HH----HHHHHHHHHHHHHHHhccCCC-----eEEEE
Confidence                    1367999999997541        111  111   11    234455677777777665443     47887


Q ss_pred             eecCc
Q 028056          177 LSARV  181 (214)
Q Consensus       177 iss~~  181 (214)
                      +|...
T Consensus       135 vtNPv  139 (159)
T d2ldxa1         135 VTNPV  139 (159)
T ss_dssp             CSSSH
T ss_pred             eCCcH
Confidence            77643

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.54  E-value=0.011  Score=40.72  Aligned_cols=120  Identities=13%  Similarity=0.173  Sum_probs=68.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhh---cCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN---RFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      |.+.|+|+ |.+|..+|..++.+|.-..+++.++++++++. ..++..   ....+......|   .+++          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHHh----------
Confidence            67788895 89999999999999854369999998875442 222221   122233333323   2222          


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                       ..-|++|..||....+.    ..+..    + -.+.++    ....+.+.+.+.+.+....     +.++++|-..
T Consensus        68 -~~adiVVitaG~~~~~~----~~~g~----~-R~~l~~----~N~~i~~~i~~~i~~~~p~-----aivivvtNPv  125 (146)
T d1hyha1          68 -ADADVVISTLGNIKLQQ----DNPTG----D-RFAELK----FTSSMVQSVGTNLKESGFH-----GVLVVISNPV  125 (146)
T ss_dssp             -TTCSEEEECCSCGGGTC----------------CTTHH----HHHHHHHHHHHHHHHTTCC-----SEEEECSSSH
T ss_pred             -ccccEEEEecccccccc----ccCCc----c-HHHHHH----HHHHHHHHHHHHHhhcCCC-----eEEEEecCcH
Confidence             36799999999753110    01110    1 111122    2355667777777765433     3777777643

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.53  E-value=0.0017  Score=45.72  Aligned_cols=75  Identities=15%  Similarity=0.121  Sum_probs=49.5

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+|+|.|+ |++|...+......|++  ++++++++++.+.+.    +.+... +  .|..+.+...       ....
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~--~i~~~~~~~~~~~a~----~lGad~-~--i~~~~~~~~~-------~~~~   92 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAH--VVAFTTSEAKREAAK----ALGADE-V--VNSRNADEMA-------AHLK   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESSGGGHHHHH----HHTCSE-E--EETTCHHHHH-------TTTT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhccccc--chhhccchhHHHHHh----ccCCcE-E--EECchhhHHH-------HhcC
Confidence            4789999986 89999998777778887  677888776644332    223322 2  3555544321       1224


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|++|.+.|..
T Consensus        93 ~~D~vid~~g~~  104 (168)
T d1uufa2          93 SFDFILNTVAAP  104 (168)
T ss_dssp             CEEEEEECCSSC
T ss_pred             CCceeeeeeecc
Confidence            799999999854

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.53  E-value=0.0015  Score=47.36  Aligned_cols=81  Identities=16%  Similarity=0.082  Sum_probs=51.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+|+|.|+ |++|...+......|+. +|++++.++++++.+.    +.+... .  .|-.+ +++.+.+.++. ...
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~-~Vi~~d~~~~rl~~a~----~~Ga~~-~--~~~~~-~~~~~~i~~~t-~g~   93 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAA-VVIVGDLNPARLAHAK----AQGFEI-A--DLSLD-TPLHEQIAALL-GEP   93 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESCHHHHHHHH----HTTCEE-E--ETTSS-SCHHHHHHHHH-SSS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhccc-ceeeecccchhhHhhh----hccccE-E--EeCCC-cCHHHHHHHHh-CCC
Confidence            4789999986 89998888777778886 6889998876654332    233321 1  23333 23333333332 223


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|++|.+.|..
T Consensus        94 g~D~vid~vG~~  105 (195)
T d1kola2          94 EVDCAVDAVGFE  105 (195)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CcEEEEECcccc
Confidence            689999999854

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.51  E-value=0.0021  Score=45.46  Aligned_cols=81  Identities=20%  Similarity=0.241  Sum_probs=51.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHH-HHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVEST-IEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~  105 (214)
                      .|.+|+|.|+ |++|...+..+...|+. .|+.+++++++++.+.+    .+. .+++  |..+.+. +++..+...  .
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~-~Vi~~~~~~~rl~~a~~----~GA-d~~i--n~~~~~~~~~~~~~~~~--~   96 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAK-RIIAVDLNPDKFEKAKV----FGA-TDFV--NPNDHSEPISQVLSKMT--N   96 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSCGGGHHHHHH----TTC-CEEE--CGGGCSSCHHHHHHHHH--T
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhc-hheeecchHHHHHHHHH----cCC-cEEE--cCCCcchhHHHHHHhhc--c
Confidence            4789999985 77888888888888887 68999998877654332    333 2233  3222221 222223222  2


Q ss_pred             CCccEEEECcccc
Q 028056          106 GSLNLLINASGIL  118 (214)
Q Consensus       106 ~~vd~lv~nag~~  118 (214)
                      +.+|+++.+.|..
T Consensus        97 ~G~d~vid~~G~~  109 (175)
T d1cdoa2          97 GGVDFSLECVGNV  109 (175)
T ss_dssp             SCBSEEEECSCCH
T ss_pred             CCcceeeeecCCH
Confidence            4789999999853

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.45  E-value=0.0099  Score=40.81  Aligned_cols=35  Identities=20%  Similarity=0.099  Sum_probs=30.2

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      .+.|+||+|.+|..+|..++.+|.-..+++.++++
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            48899999999999999999998533699999875

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.43  E-value=0.0037  Score=44.31  Aligned_cols=85  Identities=9%  Similarity=0.058  Sum_probs=59.6

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh---------------cCCCceeEEEecCCCHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN---------------RFPERLDVLQLDLTVESTI   94 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~---------------~~~~~~~~~~~Dl~~~~~v   94 (214)
                      .|-|.|- |-+|..+|+.|++.|++  |++++|++++.+++.+.-.               +.-.+...+...+.+.+.+
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~--V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v   80 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFV--VCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAV   80 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCC--EEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHH
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCe--EEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHH
Confidence            4556665 78999999999999998  9999999876654322110               0011234455567777888


Q ss_pred             HHHHHHHHHHcCCccEEEECccc
Q 028056           95 EASAKSIKEKYGSLNLLINASGI  117 (214)
Q Consensus        95 ~~~~~~~~~~~~~vd~lv~nag~  117 (214)
                      ..+.+.+.....+=+++|.+...
T Consensus        81 ~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          81 DNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHHhccccCcEEEecCcc
Confidence            88888888776666778877654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.37  E-value=0.013  Score=40.09  Aligned_cols=114  Identities=11%  Similarity=0.077  Sum_probs=61.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhhc--CCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKNR--FPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+.|.|+ |.+|..+|..++.++.-..+++.+++++.++. ..++...  ...+......   +.++           ..
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~-----------~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYSD-----------VK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG-----------GT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHHH-----------hC
Confidence            4566686 99999999999998874369999999876553 2332221  1122222221   1221           23


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      .-|++|..||...        .+.  .+.   .+.+    .....+.+.+.+.+.+....     +.++++|..
T Consensus        68 ~adivvitag~~~--------~~~--~~r---~~l~----~~N~~i~~~i~~~i~~~~p~-----ai~ivvtNP  119 (142)
T d1y6ja1          68 DCDVIVVTAGANR--------KPG--ETR---LDLA----KKNVMIAKEVTQNIMKYYNH-----GVILVVSNP  119 (142)
T ss_dssp             TCSEEEECCCC----------------CH---HHHH----HHHHHHHHHHHHHHHHHCCS-----CEEEECSSS
T ss_pred             CCceEEEeccccc--------CcC--cch---hHHh----hHHHHHHHHHHHHhhccCCC-----ceEEEecCh
Confidence            6799999999754        111  111   1122    33445666666666664332     377777764

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.36  E-value=0.015  Score=39.74  Aligned_cols=115  Identities=10%  Similarity=0.044  Sum_probs=69.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC--Ccc-cccchhh--cCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN--GAT-GLLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~--~~~-~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+.|+|++|.+|.++|..++.++.-..+++.+.+..  .++ ...++..  ....+......|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            578999999999999999999987556899886432  222 1222221  1233444443333   22           


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      ...-|++|..||...        .+-+  +..   +.+    ....-+.+.+.+.+.+....     +.++.++..
T Consensus        68 ~~~aDiVvitaG~~~--------~~g~--~R~---dl~----~~N~~I~~~i~~~i~~~~p~-----~i~ivvtNP  121 (142)
T d1o6za1          68 TAGSDVVVITAGIPR--------QPGQ--TRI---DLA----GDNAPIMEDIQSSLDEHNDD-----YISLTTSNP  121 (142)
T ss_dssp             GTTCSEEEECCCCCC--------CTTC--CHH---HHH----HHHHHHHHHHHHHHHTTCSC-----CEEEECCSS
T ss_pred             hhhcCEEEEeccccc--------ccCC--chh---hHH----HHHHHHHHHHHHHHHhcCCC-----ceEEEecCh
Confidence            136799999999653        1111  111   122    34455667777777776543     377777654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.32  E-value=0.016  Score=39.45  Aligned_cols=76  Identities=17%  Similarity=0.042  Sum_probs=48.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccccc-ch---hhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLL-DL---KNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~-~~---~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .+.|+|+ |.+|..++..++..|.-..+++.+++++.++... +.   ......+......  .+.+++           
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~~-----------   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYADT-----------   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHHh-----------
Confidence            3667786 9999999999999985336999999987654321 11   1111233333332  222222           


Q ss_pred             CCccEEEECccccC
Q 028056          106 GSLNLLINASGILS  119 (214)
Q Consensus       106 ~~vd~lv~nag~~~  119 (214)
                      ...|++|..+|...
T Consensus        68 ~dadvvvitag~~~   81 (142)
T d1guza1          68 ANSDIVIITAGLPR   81 (142)
T ss_dssp             TTCSEEEECCSCCC
T ss_pred             cCCeEEEEEEecCC
Confidence            36799999999754

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.29  E-value=0.0093  Score=41.24  Aligned_cols=37  Identities=19%  Similarity=0.200  Sum_probs=32.4

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      +|+|.|+ |.||..++..|++.|.+  |.+++|+++..+.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~--V~~~~r~~~~~~~   38 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHE--VQGWLRVPQPYCS   38 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSCCSEEE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCc--eEEEEcCHHHhhh
Confidence            4788888 99999999999999998  9999998876554

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.23  E-value=0.002  Score=45.39  Aligned_cols=76  Identities=12%  Similarity=0.144  Sum_probs=49.5

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .|.+++|.|+ |++|...+..+...|++  |+++++++++++.+.+    .+.. +++  |-.+....   .   ++...
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~--vi~~~~~~~k~~~a~~----lGa~-~~i--~~~~~~~~---~---~~~~~   90 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAE--TYVISRSSRKREDAMK----MGAD-HYI--ATLEEGDW---G---EKYFD   90 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCE--EEEEESSSTTHHHHHH----HTCS-EEE--EGGGTSCH---H---HHSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhcccc--ccccccchhHHHHhhc----cCCc-EEe--eccchHHH---H---Hhhhc
Confidence            4789999986 89999988777788987  8889999887664433    2332 222  22211111   1   12235


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|+++.+.+..
T Consensus        91 ~~d~vi~~~~~~  102 (168)
T d1piwa2          91 TFDLIVVCASSL  102 (168)
T ss_dssp             CEEEEEECCSCS
T ss_pred             ccceEEEEecCC
Confidence            789999988754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.22  E-value=0.0073  Score=42.11  Aligned_cols=80  Identities=13%  Similarity=0.108  Sum_probs=52.3

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccch---------hhc-CCCceeEEEecCCCHHHHHHHHHH
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDL---------KNR-FPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~---------~~~-~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      +.|.| .|-+|.++|+.|.+.|.+  |..++|+++..+++.+.         .+. ....++++.+   ..+.+++++++
T Consensus         3 I~iIG-~G~mG~~lA~~l~~~g~~--V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~   76 (165)
T d2f1ka2           3 IGVVG-LGLIGASLAGDLRRRGHY--LIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEK   76 (165)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHH
T ss_pred             EEEEe-ecHHHHHHHHHHHHCCCE--EEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhh
Confidence            55665 489999999999999997  98999987654432211         111 1223444433   35678888888


Q ss_pred             HHHHcCCccEEEECcc
Q 028056          101 IKEKYGSLNLLINASG  116 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag  116 (214)
                      +.....+=.++++..+
T Consensus        77 l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          77 LIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HGGGSCTTCEEEECCS
T ss_pred             hhhhcccccceeeccc
Confidence            8766555566666654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.21  E-value=0.0043  Score=42.80  Aligned_cols=76  Identities=16%  Similarity=0.196  Sum_probs=52.6

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      .++|.|. |.+|..++++|.++|.+  +++.+.+++......+..  ....+.++.+|.++++.++++-      ..+.+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~--v~vId~d~~~~~~~~~~~--~~~~~~vi~Gd~~d~~~L~~a~------i~~a~   73 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQN--VTVISNLPEDDIKQLEQR--LGDNADVIPGDSNDSSVLKKAG------IDRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCC--EEEEECCCHHHHHHHHHH--HCTTCEEEESCTTSHHHHHHHT------TTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCC--EEEEeccchhHHHHHHHh--hcCCcEEEEccCcchHHHHHhc------cccCC
Confidence            4677777 68999999999999998  777887775433222222  1346888999999988765441      13567


Q ss_pred             EEEECcc
Q 028056          110 LLINASG  116 (214)
Q Consensus       110 ~lv~nag  116 (214)
                      .+|....
T Consensus        74 ~vi~~~~   80 (153)
T d1id1a_          74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEccc
Confidence            7776653

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.19  E-value=0.0043  Score=43.37  Aligned_cols=40  Identities=15%  Similarity=0.032  Sum_probs=32.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      .|.+++|.|+ |++|...+..+...|++  |+.+++++++++.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~--Vi~~~~~~~~~~~   66 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLH--VAAIDIDDAKLEL   66 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESCHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCc--cceecchhhHHHh
Confidence            3789999886 99999988877778875  9999998876543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.10  E-value=0.046  Score=35.48  Aligned_cols=73  Identities=11%  Similarity=0.126  Sum_probs=54.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ...+.++.|.|| |=+|+.++....+.|.+  +++++.+++.-.  ...      .-.++.+|..|.+.+.++....   
T Consensus         8 ~~~~~kigIlGg-GQL~rMla~aA~~lG~~--v~v~d~~~~~PA--~~v------a~~~i~~~~~d~~~l~~~~~~~---   73 (111)
T d1kjqa2           8 RPAATRVMLLGS-GELGKEVAIECQRLGVE--VIAVDRYADAPA--MHV------AHRSHVINMLDGDALRRVVELE---   73 (111)
T ss_dssp             STTCCEEEEESC-SHHHHHHHHHHHTTTCE--EEEEESSTTCGG--GGG------SSEEEECCTTCHHHHHHHHHHH---
T ss_pred             CCCCCEEEEEeC-CHHHHHHHHHHHHCCCE--EEEEcCCCCCch--hhc------CCeEEECCCCCHHHHHHHHHhh---
Confidence            345568999994 57999999999999998  888887765421  111      1246778999999998887765   


Q ss_pred             cCCccEEEE
Q 028056          105 YGSLNLLIN  113 (214)
Q Consensus       105 ~~~vd~lv~  113 (214)
                        .+|++..
T Consensus        74 --~~DviT~   80 (111)
T d1kjqa2          74 --KPHYIVP   80 (111)
T ss_dssp             --CCSEEEE
T ss_pred             --CCceEEE
Confidence              7888743

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.02  E-value=0.0067  Score=42.23  Aligned_cols=40  Identities=15%  Similarity=0.052  Sum_probs=31.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      .|.+++|.|+ |++|...+..+...|++  |+.+++++++++.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~--v~~~~~~~~r~~~   66 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLN--VVAVDIGDEKLEL   66 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCE--EEEECSCHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCe--EeccCCCHHHhhh
Confidence            4678999865 89999988877778886  8888888766543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.00  E-value=0.019  Score=40.00  Aligned_cols=87  Identities=21%  Similarity=0.163  Sum_probs=55.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh---------h-cCCCceeEEEecCCCHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK---------N-RFPERLDVLQLDLTVESTIEASA   98 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~---------~-~~~~~~~~~~~Dl~~~~~v~~~~   98 (214)
                      |.++|.| .|-||.++|+.|.+.|....|...+++++..+.+.+.-         . .......++-.- +-.+.+.+++
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila-~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS-SPVRTFREIA   79 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC-SCHHHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc-CCchhhhhhh
Confidence            4688887 58999999999999998656888999876544322210         0 000111222211 2356788888


Q ss_pred             HHHHHHcCCccEEEECccc
Q 028056           99 KSIKEKYGSLNLLINASGI  117 (214)
Q Consensus        99 ~~~~~~~~~vd~lv~nag~  117 (214)
                      +++......=.+++...+.
T Consensus        80 ~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHSCTTCEEEECCSC
T ss_pred             hhhhccccccccccccccc
Confidence            8888776655666666654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.99  E-value=0.0019  Score=45.82  Aligned_cols=39  Identities=23%  Similarity=0.131  Sum_probs=33.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      +|++.|.|+ |.+|..+|..|+++|.+  |.+++|++++.+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~--V~~~~r~~~~~~~   39 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQS--VLAWDIDAQRIKE   39 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCE--EEEEECCHHHHHH
Confidence            478999998 78999999999999997  9999998765544

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.83  E-value=0.0012  Score=48.23  Aligned_cols=40  Identities=20%  Similarity=0.225  Sum_probs=34.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      .+++||+++|.| -|.+|..+|+.|.+.|++  |++.+.+...
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gak--vvv~d~d~~~   62 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQ--LLVADTDTER   62 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECSCHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCE--EEEecchHHH
Confidence            469999999997 667999999999999997  8888876654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.78  E-value=0.0036  Score=43.17  Aligned_cols=36  Identities=19%  Similarity=0.215  Sum_probs=31.0

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC   61 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~   61 (214)
                      ...++||++||.|| |.+|..-++.|++.|++  |.+++
T Consensus         8 ~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~--VtVva   43 (150)
T d1kyqa1           8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCK--LTLVS   43 (150)
T ss_dssp             EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCE--EEEEE
T ss_pred             heeeCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEe
Confidence            46789999999999 56999999999999998  55554

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.75  E-value=0.023  Score=40.02  Aligned_cols=38  Identities=21%  Similarity=0.177  Sum_probs=33.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      .+++||.++|.|-|.-.|+.++..|.++|+.  |..+..+
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaT--Vt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGAT--VYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCE--EEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCE--EEEeccc
Confidence            4899999999999999999999999999996  7666543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.74  E-value=0.016  Score=39.97  Aligned_cols=24  Identities=21%  Similarity=0.217  Sum_probs=21.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKND   53 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~   53 (214)
                      .|.|+||+|.+|..++..|+..+.
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l   29 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEM   29 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhccc
Confidence            799999999999999999988653

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.73  E-value=0.0082  Score=40.94  Aligned_cols=114  Identities=18%  Similarity=0.161  Sum_probs=65.9

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhh--cCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+.|.|+ |.+|..++..++.++.-..+++.+++++.++. ..++..  ....+......|   .+++           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~-----------~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL-----------K   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG-----------T
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh-----------c
Confidence            3566786 89999999999998864469999998865443 222211  112233333323   2222           3


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                      .-|++|.++|....      .+    .+..+   .+.    -...+.+.+.+.+.+...+     ..++++|..
T Consensus        67 ~adivvitag~~~~------~g----~~r~d---l~~----~N~~I~~~i~~~i~~~~p~-----aivivvtNP  118 (140)
T d1a5za1          67 GSDVVIVAAGVPQK------PG----ETRLQ---LLG----RNARVMKEIARNVSKYAPD-----SIVIVVTNP  118 (140)
T ss_dssp             TCSEEEECCCCCCC------SS----CCHHH---HHH----HHHHHHHHHHHHHHHHCTT-----CEEEECSSS
T ss_pred             CCCEEEEecccccC------CC----cchhh---hhc----cccchHHHHHHHHHhcCCC-----cEEEEeCCc
Confidence            67999999997541      11    11111   122    2344666677776665433     377777754

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.70  E-value=0.025  Score=37.79  Aligned_cols=75  Identities=17%  Similarity=0.222  Sum_probs=52.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSLN  109 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~vd  109 (214)
                      .+.|.|++|.+|+.+++.+.+.|.. .+...+++..  +.+    .  ...   +..|+|.++.+.+.++.+.+.  ++-
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~-l~~~id~~~~--~~~----~--~~D---VvIDFS~p~~~~~~l~~~~~~--~~p   67 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHE-LVLKVDVNGV--EEL----D--SPD---VVIDFSSPEALPKTVDLCKKY--RAG   67 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCE-EEEEEETTEE--EEC----S--CCS---EEEECSCGGGHHHHHHHHHHH--TCE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCe-EEEEECCCcH--HHh----c--cCC---EEEEecCHHHHHHHHHHHHhc--CCC
Confidence            4899999999999999988888886 2333343221  111    1  112   346999999999999998876  566


Q ss_pred             EEEECcccc
Q 028056          110 LLINASGIL  118 (214)
Q Consensus       110 ~lv~nag~~  118 (214)
                      +|+-..|..
T Consensus        68 ~ViGTTG~~   76 (128)
T d1vm6a3          68 LVLGTTALK   76 (128)
T ss_dssp             EEECCCSCC
T ss_pred             EEEEcCCCC
Confidence            777666653

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.67  E-value=0.0063  Score=42.39  Aligned_cols=84  Identities=21%  Similarity=0.245  Sum_probs=53.5

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh-------cCCCceeEEEecCCCHHHHHHHH---HH
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN-------RFPERLDVLQLDLTVESTIEASA---KS  100 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~-------~~~~~~~~~~~Dl~~~~~v~~~~---~~  100 (214)
                      |-|. |.|-+|..+|+.|++.|++  |++++|++++.+.+.+...       +.-.+..++-.-+.+.+.+++++   +.
T Consensus         3 IgiI-GlG~MG~~~A~~L~~~G~~--V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~   79 (161)
T d1vpda2           3 VGFI-GLGIMGKPMSKNLLKAGYS--LVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENG   79 (161)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCE--EEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             EEEE-ehhHHHHHHHHHHHHCCCe--EEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcc
Confidence            4455 4588999999999999997  9999999876554322110       00113445555677778887776   33


Q ss_pred             HHHHcCCccEEEECccc
Q 028056          101 IKEKYGSLNLLINASGI  117 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~  117 (214)
                      +.....+=+++|.+...
T Consensus        80 ~~~~~~~g~iiid~sT~   96 (161)
T d1vpda2          80 IIEGAKPGTVLIDMSSI   96 (161)
T ss_dssp             HHHHCCTTCEEEECSCC
T ss_pred             hhhccCCCCEEEECCCC
Confidence            44444445666666543

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.64  E-value=0.11  Score=35.42  Aligned_cols=122  Identities=16%  Similarity=0.123  Sum_probs=68.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc-cchhh---cCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL-LDLKN---RFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~-~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ..+.|.|+ |.+|.++|..+..++.. -+++.+++++.++.. .++..   ..+.+......|  +.+++          
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~-el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~~----------   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLG-DVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDDL----------   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGGG----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccccc----------
Confidence            35777785 99999999988888876 699999988764431 11111   112333333322  22222          


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCcc
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARVG  182 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~~  182 (214)
                       ..-|++|..+|....|     .....+.+.   ...+..|    .-+.+.+.+.+.+....     ..++++|....
T Consensus        70 -~~advvvitag~~~~~-----g~~~~~~~R---~~l~~~N----~~iv~~i~~~i~~~~p~-----aivivvtNPvD  129 (150)
T d1t2da1          70 -AGADVVIVTAGFTKAP-----GKSDKEWNR---DDLLPLN----NKIMIEIGGHIKKNCPN-----AFIIVVTNPVD  129 (150)
T ss_dssp             -TTCSEEEECCSCSSCT-----TCCSTTCCG---GGGHHHH----HHHHHHHHHHHHHHCTT-----SEEEECSSSHH
T ss_pred             -CCCcEEEEecccccCC-----CCCccccch---hHHHHHH----HHHHHHHHHHHHhcCCC-----eEEEEecCchH
Confidence             3689999999976411     111111111   1123333    44556666666654433     37777776443

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.50  E-value=0.012  Score=42.54  Aligned_cols=78  Identities=18%  Similarity=0.162  Sum_probs=57.1

Q ss_pred             cccccCcEEEEecCCCc-hhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           23 SVKWKGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~g-iG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..+++|++||=.|++.| +|.+    ++..|+. .|+.++.+++..+.+.+.+...+.+..++.+|+.+.          
T Consensus        42 ~~dl~g~~vLDlg~GtG~l~i~----a~~~g~~-~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~----------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGVLSYG----ALLLGAK-EVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF----------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCHHHHH----HHHTTCS-EEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC----------
T ss_pred             cCCCCCCEEEECcCcchHHHHH----HHHcCCC-EEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh----------
Confidence            35678999998886654 5443    4567875 699999998877766666666677888888887432          


Q ss_pred             HHHcCCccEEEECcccc
Q 028056          102 KEKYGSLNLLINASGIL  118 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~  118 (214)
                         ..++|++|.|..+.
T Consensus       107 ---~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 ---NSRVDIVIMNPPFG  120 (201)
T ss_dssp             ---CCCCSEEEECCCCS
T ss_pred             ---CCcCcEEEEcCccc
Confidence               25799999999754

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.44  E-value=0.024  Score=38.61  Aligned_cols=115  Identities=13%  Similarity=-0.017  Sum_probs=64.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchh---hcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLK---NRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      |++.|.|+ |.+|.++|..++.++.. .+++.+.+++..+. ..++.   ...+.......+  .|.+++          
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~-dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~----------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELG-DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADT----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGG----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcc-eEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHh----------
Confidence            46777786 99999999999998875 59999988875443 11111   001122222221  112222          


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecC
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSAR  180 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~  180 (214)
                       ..-|++|.+||...        .+-  .+.   .+.+.    ....+.+...+.+.+....     +.++++|..
T Consensus        68 -~~advvvitag~~~--------~~~--~~r---~dl~~----~N~~i~~~i~~~i~k~~p~-----aivivvtNP  120 (142)
T d1uxja1          68 -ANSDVIVVTSGAPR--------KPG--MSR---EDLIK----VNADITRACISQAAPLSPN-----AVIIMVNNP  120 (142)
T ss_dssp             -TTCSEEEECCSCC----------------------CHH----HHHHHHHHHHHHHGGGCTT-----CEEEECSSS
T ss_pred             -cCCCEEEEeeeccC--------CcC--cch---hHHHh----HHHHHHHHHHHHHhccCCC-----ceEEEeCCc
Confidence             26799999999753        111  111   11122    3345677777777765433     367766653

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.0029  Score=45.71  Aligned_cols=38  Identities=13%  Similarity=0.059  Sum_probs=33.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      |+|.|.|+ |-+|..+|..|+..|+.  |++.+++++.++.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~--V~l~D~~~~~l~~   42 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHT--VVLVDQTEDILAK   42 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSCHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCc--EEEEECChHHHHH
Confidence            68889998 77999999999999997  9999999876554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.35  E-value=0.0061  Score=43.66  Aligned_cols=38  Identities=24%  Similarity=0.171  Sum_probs=32.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG   69 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~   69 (214)
                      |+|.|.|+ |-||..+|..|+..|++  |++.+++++.++.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~--V~l~D~~~~~l~~   42 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTP--ILMKDINEHGIEQ   42 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCC--EEEECSSHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCe--EEEEECCHHHHhh
Confidence            46888888 78999999999999998  9999998875443

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=95.21  E-value=0.027  Score=38.41  Aligned_cols=116  Identities=12%  Similarity=0.109  Sum_probs=65.6

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchhh--cCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLKN--RFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      .+.|+|+ |.+|.++|..++.+|.-..+++.+++++.++. ..++..  .+.........  .+.+++           .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~~-----------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEIC-----------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGGG-----------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHHh-----------h
Confidence            4667786 99999999999999874469999998865432 111211  12222222222  112222           2


Q ss_pred             CccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          107 SLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       107 ~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                      .-|++|..+|...        .+.  .+..   +.+.    ....+.+.+.+.+.+....     +.++++|...
T Consensus        69 daDvVVitaG~~~--------~~g--~~R~---dl~~----~N~~i~~~i~~~i~~~~p~-----ai~ivvtNPv  121 (143)
T d1llda1          69 DADMVVITAGPRQ--------KPG--QSRL---ELVG----ATVNILKAIMPNLVKVAPN-----AIYMLITNPV  121 (143)
T ss_dssp             TCSEEEECCCCCC--------CTT--CCHH---HHHH----HHHHHHHHHHHHHHHHCTT-----SEEEECCSSH
T ss_pred             CCcEEEEeccccc--------CCC--Cchh---hhhh----hhHHHHHHHHHHHHhhCCC-----eEEEEeCCch
Confidence            5799999999753        111  1111   1232    3345566666666655433     3677777543

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.17  E-value=0.013  Score=41.67  Aligned_cols=39  Identities=26%  Similarity=0.289  Sum_probs=34.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      .++||++.|.|.+. ||+.+++.+...|.+  |+..++++..
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~--v~~~d~~~~~   77 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQ--VRGFSRTPKE   77 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCE--EEEECSSCCC
T ss_pred             cccCceEEEecccc-ccccceeeeeccccc--cccccccccc
Confidence            48999999999875 999999999999997  9888887654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.13  E-value=0.0034  Score=44.58  Aligned_cols=45  Identities=24%  Similarity=0.240  Sum_probs=35.6

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccc
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLD   72 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~   72 (214)
                      .++++|.++|.|+ ||.+++++..|.+.|   .|.+..|+.++.+.+.+
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~---~i~I~nR~~~ka~~l~~   58 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN---NIIIANRTVEKAEALAK   58 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS---EEEEECSSHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc---ceeeehhhhhHHHHHHH
Confidence            4589999999987 578999999987654   49999999877665443

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.08  E-value=0.021  Score=42.47  Aligned_cols=81  Identities=10%  Similarity=0.047  Sum_probs=53.1

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      ++++++|+|.| .||+|..++..|++.|.. ++.++|.+.-....+...       +.+-.-|+.. ..++.+.+.+.+.
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg-~i~lvD~D~Ve~sNL~RQ-------~l~~~~diG~-~K~~~a~~~l~~~   96 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVG-NLTLLDFDTVSLSNLQRQ-------TLHSDATVGQ-PKVESARDALTRI   96 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCS-EEEEECCCBCCGGGGGTC-------TTCCGGGTTS-BHHHHHHHHHHHH
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCC-eEEEECCcccchhhhhhh-------ccccHhhcCc-hHHHHHHHHHHHh
Confidence            57889999999 568999999999999998 899888765433222211       1122234543 2355556666666


Q ss_pred             cCCccEEEECc
Q 028056          105 YGSLNLLINAS  115 (214)
Q Consensus       105 ~~~vd~lv~na  115 (214)
                      .+.+.+..+..
T Consensus        97 np~~~i~~~~~  107 (247)
T d1jw9b_          97 NPHIAITPVNA  107 (247)
T ss_dssp             CTTSEEEEECS
T ss_pred             hcccchhhhhh
Confidence            66666654443

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.92  E-value=0.012  Score=42.50  Aligned_cols=73  Identities=15%  Similarity=0.101  Sum_probs=52.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .+++||+||=.|+++|+   ++..++..|+. .|+.++.++...+.+.+    ...++.++.+|+.+.            
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~-~V~~vDid~~a~~~ar~----N~~~~~~~~~D~~~l------------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAE-SVTAFDIDPDAIETAKR----NCGGVNFMVADVSEI------------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBS-EEEEEESCHHHHHHHHH----HCTTSEEEECCGGGC------------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCC-cccccccCHHHHHHHHH----ccccccEEEEehhhc------------
Confidence            46789999999988763   23346667876 69999988765443333    234688999998542            


Q ss_pred             HcCCccEEEECccc
Q 028056          104 KYGSLNLLINASGI  117 (214)
Q Consensus       104 ~~~~vd~lv~nag~  117 (214)
                       -+++|++|.|..+
T Consensus       105 -~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 -SGKYDTWIMNPPF  117 (197)
T ss_dssp             -CCCEEEEEECCCC
T ss_pred             -CCcceEEEeCccc
Confidence             2589999999865

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.91  E-value=0.036  Score=38.84  Aligned_cols=79  Identities=11%  Similarity=0.166  Sum_probs=50.5

Q ss_pred             CCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC------------------CCceeEEEecCCCHHHHHHH
Q 028056           36 ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF------------------PERLDVLQLDLTVESTIEAS   97 (214)
Q Consensus        36 ~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~------------------~~~~~~~~~Dl~~~~~v~~~   97 (214)
                      |.|-+|..+|++|++.|++  |.+++|++++.+.+.+.-...                  -.....+..-+.+...+...
T Consensus         8 GlG~MG~~ma~~L~~~G~~--V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFK--VAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDST   85 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCC--EEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCe--EEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhh
Confidence            6788999999999999998  999999887655433221100                  01222333444555666666


Q ss_pred             HHHHHHHcCCccEEEECcc
Q 028056           98 AKSIKEKYGSLNLLINASG  116 (214)
Q Consensus        98 ~~~~~~~~~~vd~lv~nag  116 (214)
                      +..+...+.+=+++|+..-
T Consensus        86 ~~~~~~~~~~~~iii~~st  104 (178)
T d1pgja2          86 IEQLKKVFEKGDILVDTGN  104 (178)
T ss_dssp             HHHHHHHCCTTCEEEECCC
T ss_pred             hhhhhhhccccceecccCc
Confidence            6666666555566666554

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.89  E-value=0.043  Score=37.93  Aligned_cols=85  Identities=15%  Similarity=0.093  Sum_probs=53.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh-------hcCCCceeEEEecCCCHHHHHHHHHH--
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK-------NRFPERLDVLQLDLTVESTIEASAKS--  100 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~Dl~~~~~v~~~~~~--  100 (214)
                      .|-+. |.|-+|.++|+.|+++|++  |.+.+|++++.+.+....       .+.-.....+..-+.+.+.++.++..  
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~--v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~   79 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYL--LNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDD   79 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCE--EEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTT
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCe--EEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccc
Confidence            45555 5678999999999999997  999999876544322111       11112344555566777777777654  


Q ss_pred             -HHHHcCCccEEEECccc
Q 028056          101 -IKEKYGSLNLLINASGI  117 (214)
Q Consensus       101 -~~~~~~~vd~lv~nag~  117 (214)
                       +.....+=+++|.+...
T Consensus        80 ~~~~~l~~g~iiid~st~   97 (162)
T d3cuma2          80 GLLAHIAPGTLVLECSTI   97 (162)
T ss_dssp             CHHHHSCTTCEEEECSCC
T ss_pred             cccccCCCCCEEEECCCC
Confidence             33334344666666653

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.81  E-value=0.093  Score=35.95  Aligned_cols=55  Identities=18%  Similarity=0.213  Sum_probs=37.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEE
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL   84 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~   84 (214)
                      |++.|.|+||.||.....-..+.-.+..|+.++.+.. .+.+.+++.++..+..++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N-~~~L~~q~~~f~pk~v~i   56 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN-VTRMVEQCLEFSPRYAVM   56 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC-HHHHHHHHHHHCCSEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc-HHHHHHHHHHHhhccccc
Confidence            6899999999999999876666543334666665443 345666777766665544

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.77  E-value=0.087  Score=35.37  Aligned_cols=78  Identities=10%  Similarity=0.133  Sum_probs=50.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g-~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      ++.|.|++|.+|+.+++...+.. .. .+...++... ..    .....+..   +..|+|.++.+.+.++.+.+.  .+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~-l~~~~d~~~~-~~----~~~~~~~D---vvIDFS~p~~~~~~~~~~~~~--~~   69 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLT-LSAELDAGDP-LS----LLTDGNTE---VVIDFTHPDVVMGNLEFLIDN--GI   69 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSE-EEEEECTTCC-TH----HHHTTTCS---EEEECCCTTTHHHHHHHHHHT--TC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCE-EEEEEecCCc-hh----hhccccCC---EEEEcccHHHHHHHHHHHHhc--CC
Confidence            57899999999999999776643 33 2333443221 11    11111222   447999999999999988876  56


Q ss_pred             cEEEECcccc
Q 028056          109 NLLINASGIL  118 (214)
Q Consensus       109 d~lv~nag~~  118 (214)
                      -+|+-..|..
T Consensus        70 ~~ViGTTG~~   79 (135)
T d1yl7a1          70 HAVVGTTGFT   79 (135)
T ss_dssp             EEEECCCCCC
T ss_pred             CEEEeccccc
Confidence            6677666643

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.51  E-value=0.055  Score=36.70  Aligned_cols=115  Identities=14%  Similarity=0.100  Sum_probs=66.3

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-ccchh---hcCCCceeEEEe-cCCCHHHHHHHHHHHHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-LLDLK---NRFPERLDVLQL-DLTVESTIEASAKSIKEK  104 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-~~~~~---~~~~~~~~~~~~-Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+.|.|+ |.+|.++|..++.+|.-..+++.+.+++.++- ..++.   ...+.......+ |.   +++          
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~~~----------   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---SLL----------   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---GGG----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---HHh----------
Confidence            3566786 99999999999988864469999988765432 22221   112222223322 32   222          


Q ss_pred             cCCccEEEECccccCCCCCCCCCcchhhccHhhhhhheeeechhHHHHHHHHhhHHhcCCCCCCCCceEEEEeecCc
Q 028056          105 YGSLNLLINASGILSIPNVLQPETTLNKVEKSSLMLAYEVNAVGPILVIKHMSPLLKVGGTGIERDVAVVANLSARV  181 (214)
Q Consensus       105 ~~~vd~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~~~~iv~iss~~  181 (214)
                       ..-|++|..+|....      .+    .+..+   .    +.....+.+.+.+.+.+....     +.++++|...
T Consensus        68 -~~adiVvitag~~~~------~g----~~r~~---l----~~~n~~i~~~i~~~i~~~~p~-----aivivvtNPv  121 (142)
T d1ojua1          68 -KGSEIIVVTAGLARK------PG----MTRLD---L----AHKNAGIIKDIAKKIVENAPE-----SKILVVTNPM  121 (142)
T ss_dssp             -TTCSEEEECCCCCCC------SS----CCHHH---H----HHHHHHHHHHHHHHHHTTSTT-----CEEEECSSSH
T ss_pred             -ccccEEEEeccccCC------CC----CchHH---H----HHHhhHHHHHHHHHHHhhCCC-----cEEEEecCCh
Confidence             367999999996541      11    11111   1    234455667777777765433     3777777643

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=94.49  E-value=0.081  Score=37.19  Aligned_cols=24  Identities=21%  Similarity=0.062  Sum_probs=21.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKN   52 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g   52 (214)
                      -.|.||||+|.||.+++..|++..
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~   48 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGE   48 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCc
Confidence            479999999999999999998753

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.25  E-value=0.16  Score=39.11  Aligned_cols=81  Identities=9%  Similarity=0.003  Sum_probs=54.8

Q ss_pred             cCcEEE-EecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC---CceeEEEecCCCHHHHHHHHHHHH
Q 028056           27 KGGVSL-VQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP---ERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        27 ~~k~vl-ItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      +|++|| +..++|+++.+++    ..|+. .|+.++.++...+.+.+.....+   .++.+++.|+-      +.++...
T Consensus       144 ~g~~VLdlf~~~G~~sl~aa----~~ga~-~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~  212 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVAAA----MGGAM-ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYAR  212 (317)
T ss_dssp             BTCEEEEETCTTTHHHHHHH----HTTBS-EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHH
T ss_pred             CCCceeecCCCCcHHHHHHH----hCCCc-eEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHH
Confidence            578887 5566777775544    46776 69999999988776655554332   36888888862      3344444


Q ss_pred             HHcCCccEEEECcccc
Q 028056          103 EKYGSLNLLINASGIL  118 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~  118 (214)
                      +...++|++|..+...
T Consensus       213 ~~~~~fD~Ii~DPP~f  228 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSF  228 (317)
T ss_dssp             HTTCCEEEEEECCCCC
T ss_pred             hhcCCCCEEEEcChhh
Confidence            4556899999987543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.92  E-value=0.04  Score=38.66  Aligned_cols=42  Identities=24%  Similarity=0.257  Sum_probs=36.0

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      ..+++||.++|.|-|.-.|+.++..|.++|+.  |..+......
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gat--Vt~~~~~t~~   75 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNAT--VTTCHSKTAH   75 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE--EEEECTTCSS
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCc--eEEEeccccc
Confidence            35789999999999999999999999999996  7777665543

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=93.58  E-value=0.068  Score=40.36  Aligned_cols=77  Identities=19%  Similarity=0.245  Sum_probs=50.0

Q ss_pred             cEEEEecCCCc-hhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCC--ceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           29 GVSLVQGASRG-IGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE--RLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        29 k~vlItG~s~g-iG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      ++++-.|+++| |+.+++ ++  ..+  .|+.++.+++.++.+.+.....+.  ++.++..|+.+.         ..+..
T Consensus       112 ~~vld~g~GsG~i~~~la-~~--~~~--~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~  177 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-KF--SDA--IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKF  177 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-HH--SSC--EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGT
T ss_pred             cEEEEeeeeeehhhhhhh-hc--ccc--eeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------ccccc
Confidence            55665555555 555544 33  344  499999999887766665555443  566677788643         22234


Q ss_pred             CCccEEEECccccC
Q 028056          106 GSLNLLINASGILS  119 (214)
Q Consensus       106 ~~vd~lv~nag~~~  119 (214)
                      +++|++|.|..+..
T Consensus       178 ~~fDlIVsNPPYI~  191 (271)
T d1nv8a_         178 ASIEMILSNPPYVK  191 (271)
T ss_dssp             TTCCEEEECCCCBC
T ss_pred             CcccEEEEcccccC
Confidence            68999999998764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.50  E-value=0.026  Score=37.51  Aligned_cols=70  Identities=17%  Similarity=0.131  Sum_probs=46.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGSL  108 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~v  108 (214)
                      |.++|.|. |.+|..++++|.  |..  |++.+.+++..+..    ..  ..+.++.+|.++++.++++      ...+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~--i~vi~~d~~~~~~~----~~--~~~~~i~Gd~~~~~~L~~a------~i~~A   63 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSE--VFVLAEDENVRKKV----LR--SGANFVHGDPTRVSDLEKA------NVRGA   63 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGG--EEEEESCTTHHHHH----HH--TTCEEEESCTTSHHHHHHT------TCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCC--CEEEEcchHHHHHH----Hh--cCccccccccCCHHHHHHh------hhhcC
Confidence            45777775 679999999984  445  66677776653322    11  2577889999998876543      12356


Q ss_pred             cEEEECc
Q 028056          109 NLLINAS  115 (214)
Q Consensus       109 d~lv~na  115 (214)
                      +.+|...
T Consensus        64 ~~vi~~~   70 (129)
T d2fy8a1          64 RAVIVNL   70 (129)
T ss_dssp             SEEEECC
T ss_pred             cEEEEec
Confidence            7776544

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.39  E-value=0.052  Score=37.84  Aligned_cols=39  Identities=26%  Similarity=0.196  Sum_probs=33.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      .+++||+++|.|-|.-.|+.++..|.++|+.  |..+....
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gat--Vt~~h~~t   71 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCT--TTVTHRFT   71 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCE--EEEECSSC
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhcc--cccccccc
Confidence            5689999999999999999999999999997  76665444

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.36  E-value=0.045  Score=44.15  Aligned_cols=82  Identities=17%  Similarity=0.146  Sum_probs=53.4

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      .+++..|||.|+ ||+|.++++.|+..|.. .+.++|.+.-....+..       +..+-.-|+... ..+.+.+.+.+.
T Consensus        34 ~l~~~kVlvvG~-GglG~ei~k~L~~~Gvg-~i~lvD~D~Ve~sNL~R-------Qflf~~~diG~~-Ka~~a~~~l~~~  103 (426)
T d1yovb1          34 LLDTCKVLVIGA-GGLGCELLKNLALSGFR-QIHVIDMDTIDVSNLNR-------QFLFRPKDIGRP-KAEVAAEFLNDR  103 (426)
T ss_dssp             HHHHCCEEEECS-STTHHHHHHHHHTTTCC-CEEEECCCBCCGGGGGT-------CTTCCGGGTTSB-HHHHHHHHHHHH
T ss_pred             HHhcCeEEEECC-CHHHHHHHHHHHHcCCC-eEEEEECCCcchhhhcc-------cccCChhHcCcH-HHHHHHHHHHhh
Confidence            357788999999 57999999999999996 68888876543222221       112222355433 345566777666


Q ss_pred             cCCccEEEECcc
Q 028056          105 YGSLNLLINASG  116 (214)
Q Consensus       105 ~~~vd~lv~nag  116 (214)
                      .+.+.+..+..-
T Consensus       104 np~v~i~~~~~~  115 (426)
T d1yovb1         104 VPNCNVVPHFNK  115 (426)
T ss_dssp             STTCCCEEECSC
T ss_pred             CCCCceEeeecc
Confidence            677776655544

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.35  E-value=0.056  Score=37.06  Aligned_cols=56  Identities=25%  Similarity=0.225  Sum_probs=38.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEE
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQ   85 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~   85 (214)
                      |++.|.|+||.||.....-+.+.-.+..|+.++.+. ..+.+.+++.++..+..++.
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~Pk~v~i~   58 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAVIA   58 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEEES
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhccccceec
Confidence            899999999999999887665542223476666554 34456667777777666543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.33  E-value=0.085  Score=35.00  Aligned_cols=78  Identities=17%  Similarity=0.130  Sum_probs=52.2

Q ss_pred             cCcEEEEecCCC-ch---------hHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHH
Q 028056           27 KGGVSLVQGASR-GI---------GLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        27 ~~k~vlItG~s~-gi---------G~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      +.|.|||.|++. .|         +.+.++.|.+.|++  +|+++.|++....-.+.    ..++.+-+.   ..+.+.+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~--~iliN~NP~TVstd~d~----aD~lYfePl---t~e~v~~   76 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYR--VINVNSNPATIMTDPEM----ADATYIEPI---HWEVVRK   76 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCE--EEEECSCTTCGGGCGGG----SSEEECSCC---CHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCe--EEEecCchHhhhcChhh----cceeeeecC---CHHHHHH
Confidence            347888888753 44         46788999999998  99999999874432111    223333332   3466776


Q ss_pred             HHHHHHHHcCCccEEEECcccc
Q 028056           97 SAKSIKEKYGSLNLLINASGIL  118 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~  118 (214)
                      +++.-     ++|.++-..|..
T Consensus        77 Ii~~E-----~pd~il~~~GGQ   93 (127)
T d1a9xa3          77 IIEKE-----RPDAVLPTMGGQ   93 (127)
T ss_dssp             HHHHH-----CCSEEECSSSHH
T ss_pred             HHHHh-----CcCCeEEEeeee
Confidence            66654     889998888764

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.16  E-value=0.72  Score=30.72  Aligned_cols=87  Identities=15%  Similarity=0.092  Sum_probs=58.7

Q ss_pred             cCcEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecCCCCccc--ccchhhcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           27 KGGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        27 ~~k~vlItG~s---~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      +-|++.|.|+|   +..|..+.+.|.+.|++  |+.+.........  +...+.+.+..+..+.. +..++.+.++++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~--v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCE--EEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHH
Confidence            45899999999   58999999999999997  8877665443221  23333444444444322 24577888889988


Q ss_pred             HHHcCCccEEEECcccc
Q 028056          102 KEKYGSLNLLINASGIL  118 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~  118 (214)
                      .+.  .+..++...|..
T Consensus        95 ~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          95 IKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHH--TCSEEEECTTCC
T ss_pred             HHh--CCCEEEEecccc
Confidence            876  356676666643

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.13  E-value=0.11  Score=40.14  Aligned_cols=81  Identities=12%  Similarity=0.075  Sum_probs=54.4

Q ss_pred             ccCcEEEEec-CCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCC-ceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSLVQG-ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vlItG-~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      .+|++||=.+ ++|+++.++|    ..+.  +|+.++.++..++.+.+.....+- ++.++.+|..+      +.+...+
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~a----~g~~--~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~  211 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHLA----LGFR--EVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEK  211 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHHH----HHEE--EEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHH
T ss_pred             hCCCeeeccCCCCcHHHHHHH----hcCC--cEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHh
Confidence            4788888555 5677765544    3344  499999999887777666665553 68888887643      2233334


Q ss_pred             HcCCccEEEECcccc
Q 028056          104 KYGSLNLLINASGIL  118 (214)
Q Consensus       104 ~~~~vd~lv~nag~~  118 (214)
                      ...++|.||.++...
T Consensus       212 ~~~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         212 EGERFDLVVLDPPAF  226 (318)
T ss_dssp             TTCCEEEEEECCCCS
T ss_pred             hhcCCCEEEEcCCcc
Confidence            446899999998654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.10  E-value=0.073  Score=36.47  Aligned_cols=35  Identities=17%  Similarity=0.107  Sum_probs=26.0

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCC-----CcEEEEeecCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKND-----KGCVIATCRNP   64 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~-----~~~vi~~~r~~   64 (214)
                      .|.|+||+|.+|.+++..|+..+.     ...+++.+.++
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~   44 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP   44 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc
Confidence            789999999999999999987543     11255555543

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.94  E-value=0.085  Score=40.37  Aligned_cols=78  Identities=13%  Similarity=0.133  Sum_probs=51.5

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc--CCCceeEEEecCCCHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      ..++||+||-.|++.|+   ++..+++.|+. +|+.++.++.. ..+.+...+  ...++.++..|+.+...        
T Consensus        32 ~~~~~~~VLDiGcG~G~---lsl~aa~~Ga~-~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~--------   98 (311)
T d2fyta1          32 HIFKDKVVLDVGCGTGI---LSMFAAKAGAK-KVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL--------   98 (311)
T ss_dssp             GGTTTCEEEEETCTTSH---HHHHHHHTTCS-EEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC--------
T ss_pred             ccCCcCEEEEECCCCCH---HHHHHHHcCCC-EEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC--------
Confidence            34689999999988775   45566778987 79999887643 223333222  23578888888876431        


Q ss_pred             HHHcCCccEEEECcc
Q 028056          102 KEKYGSLNLLINASG  116 (214)
Q Consensus       102 ~~~~~~vd~lv~nag  116 (214)
                        ...++|++|....
T Consensus        99 --~~~~~D~Ivse~~  111 (311)
T d2fyta1          99 --PVEKVDVIISEWM  111 (311)
T ss_dssp             --SCSCEEEEEECCC
T ss_pred             --ccccceEEEEeee
Confidence              1247888887653

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.83  E-value=0.15  Score=34.68  Aligned_cols=78  Identities=15%  Similarity=0.196  Sum_probs=52.2

Q ss_pred             cccCcEEEEec-CCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC--CceeEEEecCCCHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQG-ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        25 ~l~~k~vlItG-~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .++|+.||=.| |||.+|.+    .+.+|+. +|+.++.+++..+.+.+.....+  .++.+++.|..+      .++  
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~-~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~--   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMS-AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID--   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCC-EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH--
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcc-eeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc--
Confidence            46899998555 55666664    4568887 79999999877665555554443  468888888532      122  


Q ss_pred             HHHcCCccEEEECcc
Q 028056          102 KEKYGSLNLLINASG  116 (214)
Q Consensus       102 ~~~~~~vd~lv~nag  116 (214)
                       ....++|+++.++.
T Consensus        79 -~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 -CLTGRFDLVFLDPP   92 (152)
T ss_dssp             -HBCSCEEEEEECCS
T ss_pred             -ccccccceeEechh
Confidence             22357899988764

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.65  E-value=0.066  Score=37.84  Aligned_cols=82  Identities=17%  Similarity=0.264  Sum_probs=55.4

Q ss_pred             cccCcEEE-EecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHH
Q 028056           25 KWKGGVSL-VQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        25 ~l~~k~vl-ItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      .++|+++| +..|||.+|.+    .+++|+. .|+.++.+++..+.+.+.+...  ..++.++.+|+.      +.+++.
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~-~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~  107 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMD-KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQF  107 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCS-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchh-HHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhh
Confidence            35788887 66677878875    4558887 7999999987766555544332  336888887763      334444


Q ss_pred             HHHcCCccEEEECccc
Q 028056          102 KEKYGSLNLLINASGI  117 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~  117 (214)
                      .+...++|+++..+.+
T Consensus       108 ~~~~~~fDlIflDPPY  123 (182)
T d2fhpa1         108 YEEKLQFDLVLLDPPY  123 (182)
T ss_dssp             HHTTCCEEEEEECCCG
T ss_pred             cccCCCcceEEechhh
Confidence            4444579999877643

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=92.63  E-value=0.27  Score=33.86  Aligned_cols=85  Identities=14%  Similarity=0.165  Sum_probs=52.1

Q ss_pred             EEEEecCCCchhHHHHHHHHhcC-CCcEEEEeecCCCC-c-ccccch-------------hhcCCCceeEEEecCCCHHH
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKN-DKGCVIATCRNPNG-A-TGLLDL-------------KNRFPERLDVLQLDLTVEST   93 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g-~~~~vi~~~r~~~~-~-~~~~~~-------------~~~~~~~~~~~~~Dl~~~~~   93 (214)
                      .+.|.|++|.+|+++++...+.. .. .+-.++|.... . +...+.             ....-.++. +..|++.++.
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~-lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~   83 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQ-LGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEG   83 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEE-CCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCE-EEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHH
Confidence            58999999999999999887753 33 22333332211 0 001000             000111222 4479999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECcccc
Q 028056           94 IEASAKSIKEKYGSLNLLINASGIL  118 (214)
Q Consensus        94 v~~~~~~~~~~~~~vd~lv~nag~~  118 (214)
                      +.+.++.+.+.  ++.+|+-..|..
T Consensus        84 ~~~~~~~a~~~--~~~~ViGTTG~~  106 (162)
T d1diha1          84 TLNHLAFCRQH--GKGMVIGTTGFD  106 (162)
T ss_dssp             HHHHHHHHHHT--TCEEEECCCCCC
T ss_pred             HHHHHHHHHhc--cceeEEecCCCc
Confidence            99998887765  677887777753

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.51  E-value=0.25  Score=34.82  Aligned_cols=83  Identities=16%  Similarity=0.106  Sum_probs=51.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHH---------------
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVES---------------   92 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---------------   92 (214)
                      -..|+|.|+. -.|...++-....|++  |.++|.+.+.+++++++..+      ++..+..+.+               
T Consensus        29 pa~VvViGaG-vaG~~Aa~~A~~lGA~--V~v~D~~~~~~~~l~~l~~~------~i~~~~~~~~~~~~~~gyA~~~s~~   99 (183)
T d1l7da1          29 PARVLVFGVG-VAGLQAIATAKRLGAV--VMATDVRAATKEQVESLGGK------FITVDDEAMKTAETAGGYAKEMGEE   99 (183)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCSTTHHHHHHTTCE------ECCC---------------------
T ss_pred             CcEEEEEcCc-HHHHHHHHHHHHcCCE--EEEEeccHHHHHHHHHhhcc------eEEEeccccccccccccchhhcCHH
Confidence            3578888875 5788889888999997  99999999887766554322      1111111111               


Q ss_pred             HHHHHHHHHHHHcCCccEEEECccccC
Q 028056           93 TIEASAKSIKEKYGSLNLLINASGILS  119 (214)
Q Consensus        93 ~v~~~~~~~~~~~~~vd~lv~nag~~~  119 (214)
                      ....--+.+.+...+-|++|..+-+.+
T Consensus       100 ~~~~~~~~l~~~l~~aDlVI~talipG  126 (183)
T d1l7da1         100 FRKKQAEAVLKELVKTDIAITTALIPG  126 (183)
T ss_dssp             --CCHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHHHHHHHHhhhhheeeeecCC
Confidence            111112333344568899999998765

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.48  E-value=0.2  Score=38.43  Aligned_cols=80  Identities=8%  Similarity=-0.036  Sum_probs=53.1

Q ss_pred             cCcEEE-EecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC---CCceeEEEecCCCHHHHHHHHHHHH
Q 028056           27 KGGVSL-VQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF---PERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        27 ~~k~vl-ItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ++++|| +..++|+++.+++    ..|+.  |+.++.++..++.+.+.....   ..++.+++.|+      .+.+++..
T Consensus       132 ~~~rVLdlf~~tG~~sl~aa----~~GA~--V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~------~~~l~~~~  199 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLVAA----AAGAE--VTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA------MKFIQREE  199 (309)
T ss_dssp             SCCEEEEETCTTCHHHHHHH----HTTCE--EEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH------HHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHHHH----hCCCe--EEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCH------HHhHHHHh
Confidence            466777 6666777766654    46776  899998887766655544322   23678888776      33345555


Q ss_pred             HHcCCccEEEECcccc
Q 028056          103 EKYGSLNLLINASGIL  118 (214)
Q Consensus       103 ~~~~~vd~lv~nag~~  118 (214)
                      +...++|+||.+.-..
T Consensus       200 ~~~~~fD~IilDPP~f  215 (309)
T d2igta1         200 RRGSTYDIILTDPPKF  215 (309)
T ss_dssp             HHTCCBSEEEECCCSE
T ss_pred             hcCCCCCEEEECCCcc
Confidence            5556899999987644

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.23  E-value=0.038  Score=39.56  Aligned_cols=82  Identities=9%  Similarity=0.124  Sum_probs=59.8

Q ss_pred             CcEEE-EecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           28 GGVSL-VQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        28 ~k~vl-ItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +.+++ +|-|+||...++...+ . +.+  |+.+|++++..+.+.+.+..++.++.+++.+.++...+   ....  ...
T Consensus        24 ~~~~lD~t~G~Gghs~~il~~~-~-~~~--vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~--~~~   94 (192)
T d1m6ya2          24 EKIILDCTVGEGGHSRAILEHC-P-GCR--IIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTL--GIE   94 (192)
T ss_dssp             TCEEEETTCTTSHHHHHHHHHC-T-TCE--EEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHT--TCS
T ss_pred             CCEEEEecCCCcHHHHHHHhcC-C-CCe--EEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHc--CCC
Confidence            34444 7888888888888765 2 344  99999999888877777777788999999998765443   2221  135


Q ss_pred             CccEEEECcccc
Q 028056          107 SLNLLINASGIL  118 (214)
Q Consensus       107 ~vd~lv~nag~~  118 (214)
                      .+|.++..-|+.
T Consensus        95 ~vdgIl~DlGvS  106 (192)
T d1m6ya2          95 KVDGILMDLGVS  106 (192)
T ss_dssp             CEEEEEEECSCC
T ss_pred             Ccceeeeccchh
Confidence            899999888875

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.079  Score=36.79  Aligned_cols=41  Identities=29%  Similarity=0.340  Sum_probs=35.5

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      +...+.||+++|.|=. .||+.+|+.+...|++  |++++.++-
T Consensus        18 t~~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~--V~v~e~dp~   58 (163)
T d1li4a1          18 TDVMIAGKVAVVAGYG-DVGKGCAQALRGFGAR--VIITEIDPI   58 (163)
T ss_dssp             HCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCHH
T ss_pred             hCceecCCEEEEeccc-cccHHHHHHHHhCCCe--eEeeecccc
Confidence            3466899999999865 8999999999999997  999988773

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=91.98  E-value=0.2  Score=34.75  Aligned_cols=77  Identities=25%  Similarity=0.221  Sum_probs=54.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +-.+++|.|+. --|...++...+.|++  |.++|.+.+++++++....   .++.   +-..+++.+++.+.       
T Consensus        31 ~pa~V~ViGaG-vaG~~A~~~A~~lGA~--V~~~D~~~~~l~~l~~~~~---~~~~---~~~~~~~~l~~~~~-------   94 (168)
T d1pjca1          31 KPGKVVILGGG-VVGTEAAKMAVGLGAQ--VQIFDINVERLSYLETLFG---SRVE---LLYSNSAEIETAVA-------   94 (168)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHG---GGSE---EEECCHHHHHHHHH-------
T ss_pred             CCcEEEEECCC-hHHHHHHHHHhhCCCE--EEEEeCcHHHHHHHHHhhc---ccce---eehhhhhhHHHhhc-------
Confidence            44688888875 5788889889999997  9999998877666555442   2333   33455666554444       


Q ss_pred             CccEEEECccccC
Q 028056          107 SLNLLINASGILS  119 (214)
Q Consensus       107 ~vd~lv~nag~~~  119 (214)
                      .-|++|..+-+.+
T Consensus        95 ~aDivI~aalipG  107 (168)
T d1pjca1          95 EADLLIGAVLVPG  107 (168)
T ss_dssp             TCSEEEECCCCTT
T ss_pred             cCcEEEEeeecCC
Confidence            6799999998754

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.71  E-value=0.13  Score=35.02  Aligned_cols=38  Identities=21%  Similarity=0.088  Sum_probs=31.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      .||+|+|.||+ -.|..+|..|.+.+.+..|.++++++.
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~~   38 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNTD   38 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCSC
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCCc
Confidence            37899999986 679999999999997656888887663

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.62  E-value=0.32  Score=37.39  Aligned_cols=81  Identities=11%  Similarity=0.101  Sum_probs=54.6

Q ss_pred             cCcEEEEec-CCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC--CceeEEEecCCCHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQG-ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        27 ~~k~vlItG-~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +|++||=.+ |+|+++..++    ..|+. .|+.++.++..++.+.+.....+  .++.+++.|+.      +....+.+
T Consensus       145 ~g~~VLDl~~g~G~~si~~a----~~ga~-~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~  213 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHAA----IAGAD-EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQK  213 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHHH----HTTCS-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHH
T ss_pred             CCCeeecccCcccchhhhhh----hcCCc-EEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHh
Confidence            378888555 5567666554    46776 79999999988777666655544  36777777763      22333444


Q ss_pred             HcCCccEEEECcccc
Q 028056          104 KYGSLNLLINASGIL  118 (214)
Q Consensus       104 ~~~~vd~lv~nag~~  118 (214)
                      ...++|++|.++...
T Consensus       214 ~~~~fD~Vi~DpP~~  228 (324)
T d2as0a2         214 KGEKFDIVVLDPPAF  228 (324)
T ss_dssp             TTCCEEEEEECCCCS
T ss_pred             ccCCCCchhcCCccc
Confidence            446899999988654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.53  E-value=0.16  Score=34.61  Aligned_cols=83  Identities=12%  Similarity=0.031  Sum_probs=49.5

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhh------cCCCceeEEEecCCCHHHHHHHHHHHHHH
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKN------RFPERLDVLQLDLTVESTIEASAKSIKEK  104 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~------~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  104 (214)
                      +-+.|- |-+|..+|++|++.|.   +++.+|+.++.+...+...      +.-.+...+-..+.+.+.+....+.+.+.
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~   78 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFP---TLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPY   78 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSC---EEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTT
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCC---EEEEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccc
Confidence            445554 7899999999998876   4567777654332211110      00012334444566677787777777666


Q ss_pred             cCCccEEEECccc
Q 028056          105 YGSLNLLINASGI  117 (214)
Q Consensus       105 ~~~vd~lv~nag~  117 (214)
                      ..+-.++|.+...
T Consensus        79 ~~~~~~iid~sT~   91 (156)
T d2cvza2          79 LREGTYWVDATSG   91 (156)
T ss_dssp             CCTTEEEEECSCC
T ss_pred             ccccccccccccC
Confidence            5555666666643

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.48  E-value=0.56  Score=31.59  Aligned_cols=37  Identities=8%  Similarity=-0.076  Sum_probs=26.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcC-CC-cEEEEeecCCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKN-DK-GCVIATCRNPN   65 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g-~~-~~vi~~~r~~~   65 (214)
                      |.|.|.||||-.|+.+.+.|+++. +. ..+.+..++..
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            468899999999999998777653 22 23555555543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.31  E-value=0.1  Score=37.41  Aligned_cols=87  Identities=18%  Similarity=0.060  Sum_probs=52.9

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCccc-------ccchhhcCCCceeEEEecCCCHHHHH
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATG-------LLDLKNRFPERLDVLQLDLTVESTIE   95 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~~~~~v~   95 (214)
                      ...+.||++.|.|.+ .||+.+|+.+..-|.+  |+..++.......       +.+.+.  ...+..+.+-+++..  +
T Consensus        40 ~~~l~~ktvgIiG~G-~IG~~va~~l~~fg~~--v~~~d~~~~~~~~~~~~~~~l~~l~~--~~D~v~~~~plt~~T--~  112 (199)
T d1dxya1          40 GKELGQQTVGVMGTG-HIGQVAIKLFKGFGAK--VIAYDPYPMKGDHPDFDYVSLEDLFK--QSDVIDLHVPGIEQN--T  112 (199)
T ss_dssp             CCCGGGSEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSCCSSCCTTCEECCHHHHHH--HCSEEEECCCCCGGG--T
T ss_pred             cccccceeeeeeecc-ccccccccccccccee--eeccCCccchhhhcchhHHHHHHHHH--hcccceeeecccccc--c
Confidence            357899999999875 7999999999999997  8888886543221       122222  235666666665432  2


Q ss_pred             HHH-HHHHHHcCCccEEEECcc
Q 028056           96 ASA-KSIKEKYGSLNLLINASG  116 (214)
Q Consensus        96 ~~~-~~~~~~~~~vd~lv~nag  116 (214)
                      .++ .+..+...+=-++||.+-
T Consensus       113 ~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         113 HIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             TSBCHHHHHHSCTTEEEEECSC
T ss_pred             ccccHHHhhccCCceEEEeccc
Confidence            222 233333333345555553

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.06  E-value=0.17  Score=33.01  Aligned_cols=36  Identities=25%  Similarity=0.214  Sum_probs=29.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      +|.++|.||+ .+|.++|..|++.|.+  |.++.+++.-
T Consensus        30 ~~~vvIIGgG-~iG~E~A~~l~~~g~~--Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIVGGG-VIGLELAATARTAGVH--VSLVETQPRL   65 (121)
T ss_dssp             TCEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSSST
T ss_pred             CCeEEEECcc-hhHHHHHHHhhcccce--EEEEeecccc
Confidence            5788777764 8999999999999997  8888887653

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=91.03  E-value=0.2  Score=37.20  Aligned_cols=74  Identities=19%  Similarity=0.165  Sum_probs=52.7

Q ss_pred             ccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           26 WKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .+|++||=.|+++|+-   +..+++.|++  |+.++.+++..+.+.+.....+.+..+++.|+.+      .+     ..
T Consensus       119 ~~g~~VLDiGcGsG~l---~i~aa~~g~~--V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~~-----~~  182 (254)
T d2nxca1         119 RPGDKVLDLGTGSGVL---AIAAEKLGGK--ALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------AL-----PF  182 (254)
T ss_dssp             CTTCEEEEETCTTSHH---HHHHHHTTCE--EEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------HG-----GG
T ss_pred             CccCEEEEcccchhHH---HHHHHhcCCE--EEEEECChHHHHHHHHHHHHcCCceeEEeccccc------cc-----cc
Confidence            4689999999888763   3346677876  9999999988877776666666677777776421      11     12


Q ss_pred             CCccEEEECc
Q 028056          106 GSLNLLINAS  115 (214)
Q Consensus       106 ~~vd~lv~na  115 (214)
                      +++|+++.|-
T Consensus       183 ~~fD~V~ani  192 (254)
T d2nxca1         183 GPFDLLVANL  192 (254)
T ss_dssp             CCEEEEEEEC
T ss_pred             cccchhhhcc
Confidence            5789998764

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.03  E-value=0.18  Score=37.06  Aligned_cols=35  Identities=26%  Similarity=0.214  Sum_probs=28.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHh-cCCCcEEEEee
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLE-KNDKGCVIATC   61 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~-~g~~~~vi~~~   61 (214)
                      .++++++++|-| .|-.|..+|+.|++ .|+.  |+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~--vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSK--VVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCE--EEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCc--eEEee
Confidence            468999999996 77899999999975 5887  55444

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.93  E-value=0.23  Score=37.96  Aligned_cols=77  Identities=12%  Similarity=0.125  Sum_probs=50.5

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhc--CCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNR--FPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++||+||-.|++.|+   ++..+++.|+. +|+.++.++. ...+.+....  ...++.+++.|+.+.+.         
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~-~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~---------   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGAR-KVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL---------   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCS-EEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC---------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCC-EEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc---------
Confidence            3579999999988775   45566778887 6888887753 3333333322  24568888888876431         


Q ss_pred             HHcCCccEEEECcc
Q 028056          103 EKYGSLNLLINASG  116 (214)
Q Consensus       103 ~~~~~vd~lv~nag  116 (214)
                       ...++|+++....
T Consensus        97 -~~~~~D~ivs~~~  109 (316)
T d1oria_          97 -PVEKVDIIISEWM  109 (316)
T ss_dssp             -SSSCEEEEEECCC
T ss_pred             -ccceeEEEeeeee
Confidence             1246788877654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.76  E-value=0.19  Score=32.84  Aligned_cols=36  Identities=22%  Similarity=0.171  Sum_probs=29.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      +.|.++|.|| |.+|.++|..|++.|.+  |.++.+.+.
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~--Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKK--VTVIDILDR   64 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceE--EEEEEecCc
Confidence            4578888865 59999999999999998  877777654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=90.54  E-value=0.064  Score=36.56  Aligned_cols=38  Identities=13%  Similarity=0.167  Sum_probs=30.1

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~   70 (214)
                      +.+.|+ |-+|.++++.|++.|.. .|.+.+|++++.+.+
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~-~i~v~~r~~~~~~~l   40 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGY-RIYIANRGAEKRERL   40 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSC-EEEEECSSHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCC-cEEEEeCChhHHHHh
Confidence            456655 89999999999999854 599999998765544

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=90.32  E-value=0.1  Score=36.33  Aligned_cols=61  Identities=10%  Similarity=0.059  Sum_probs=42.9

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC-------------CCceeEEEecCCCHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-------------PERLDVLQLDLTVES   92 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~   92 (214)
                      ++++||..|++.|   ..+..|+++|++  |+.++.++...+.+.+...+.             +....++++|..+..
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~--V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~   93 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYH--VVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   93 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCE--EEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCc--eEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence            5789999999876   356688999997  999998887655444333221             335667788877654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.23  E-value=1.1  Score=29.15  Aligned_cols=78  Identities=17%  Similarity=0.086  Sum_probs=50.9

Q ss_pred             cCcEEEEecCCC-ch---------hHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHH
Q 028056           27 KGGVSLVQGASR-GI---------GLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEA   96 (214)
Q Consensus        27 ~~k~vlItG~s~-gi---------G~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   96 (214)
                      ..|.+||.|++. .|         +.+.++.|.+.|++  +|++..|++....-.+.    ..++.+-+.   ..+.+.+
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~--~IliN~NPeTVstd~d~----aD~lYfepl---t~e~v~~   73 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYE--TIMVNCNPETVSTDYDT----SDRLYFEPV---TLEDVLE   73 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCE--EEEECCCTTSSTTSTTS----SSEEECCCC---SHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCe--EEEEecChhhhhcChhh----cCceEEccC---CHHHHHH
Confidence            357899999753 33         56788999999997  99999999864421111    223333322   3456666


Q ss_pred             HHHHHHHHcCCccEEEECcccc
Q 028056           97 SAKSIKEKYGSLNLLINASGIL  118 (214)
Q Consensus        97 ~~~~~~~~~~~vd~lv~nag~~  118 (214)
                      +++.-     ++|.++-..|..
T Consensus        74 Ii~~E-----~p~~ii~~~GGQ   90 (121)
T d1a9xa4          74 IVRIE-----KPKGVIVQYGGQ   90 (121)
T ss_dssp             HHHHH-----CCSEEECSSSTH
T ss_pred             HHHHh-----CCCEEEeehhhh
Confidence            65544     788888887754

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.10  E-value=0.2  Score=34.17  Aligned_cols=41  Identities=22%  Similarity=0.263  Sum_probs=28.4

Q ss_pred             cccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           21 SASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        21 ~~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      .+.+.+++| |+|.|| |..|...|..+.+.|++ .|.++.|..
T Consensus        39 ~~~p~~~~k-VvVIGG-GdtA~D~A~~a~r~GA~-~V~vi~rr~   79 (153)
T d1gtea3          39 SPLPSIRGA-VIVLGA-GDTAFDCATSALRCGAR-RVFLVFRKG   79 (153)
T ss_dssp             CCCCCCCSE-EEEECS-SHHHHHHHHHHHHTTCS-EEEEECSSC
T ss_pred             CccccCCCE-EEEECC-ChhHHHHHHHHHHcCCc-ceeEEEeCC
Confidence            333445555 555544 46888999999999998 677776654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=89.89  E-value=0.032  Score=39.82  Aligned_cols=37  Identities=22%  Similarity=0.213  Sum_probs=30.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcc
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGAT   68 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~   68 (214)
                      +.+.|.|++ ..|.++|..|++.|.+  |.+++|+++..+
T Consensus         8 ~KI~ViGaG-~wGtAlA~~La~~g~~--V~l~~r~~~~~~   44 (189)
T d1n1ea2           8 NKAVVFGSG-AFGTALAMVLSKKCRE--VCVWHMNEEEVR   44 (189)
T ss_dssp             EEEEEECCS-HHHHHHHHHHHTTEEE--EEEECSCHHHHH
T ss_pred             ceEEEECCC-HHHHHHHHHHHHcCCe--EEEEEecHHHHH
Confidence            568888876 5999999999999987  999999876544

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.82  E-value=0.092  Score=36.86  Aligned_cols=31  Identities=16%  Similarity=0.289  Sum_probs=25.7

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      .|.|.|+ |.+|.++|..|++.|.+  |.+++|.
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~--V~l~~r~   32 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNE--VRIWGTE   32 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCE--EEEECCG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCE--EEEEEec
Confidence            3566766 68999999999999987  8888874

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.76  E-value=0.27  Score=33.16  Aligned_cols=36  Identities=11%  Similarity=0.073  Sum_probs=28.6

Q ss_pred             CcEEEEe-cCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           28 GGVSLVQ-GASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        28 ~k~vlIt-G~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      ++.++|. .|++.||.++|..|++.|.+  |.++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~--Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHE--VTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCE--EEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCe--EEEEecCCc
Confidence            4555554 56789999999999999998  888887654

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.45  E-value=0.54  Score=35.51  Aligned_cols=26  Identities=23%  Similarity=0.174  Sum_probs=21.7

Q ss_pred             CCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           36 ASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        36 ~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      .||..|.++|+.|..+|+.  |+++.+.
T Consensus        44 SSGk~G~alA~~~~~~Ga~--V~li~g~   69 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYG--VLFLYRA   69 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCE--EEEEEET
T ss_pred             CchHHHHHHHHHHHHcCCE--EEEEecC
Confidence            3678999999999999998  7776554

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.40  E-value=0.29  Score=31.38  Aligned_cols=34  Identities=21%  Similarity=0.176  Sum_probs=28.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      |.++|.||+ -+|.++|..|++.|.+  |.++.|.+.
T Consensus        23 ~~v~IiGgG-~ig~E~A~~l~~~G~~--Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGGG-YIGIELGTAYANFGTK--VTILEGAGE   56 (117)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSSS
T ss_pred             CeEEEECCC-ccceeeeeeecccccE--EEEEEecce
Confidence            678888875 8999999999999998  888777664

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=89.39  E-value=0.19  Score=36.92  Aligned_cols=34  Identities=24%  Similarity=0.047  Sum_probs=27.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      +|+|+|.||+ -=|...|.+|++.|.+  |+++.+++
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~--V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLN--VTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCE--EEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCC--EEEEeCCC
Confidence            5788888765 5678889999999998  88887655

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.26  E-value=0.17  Score=37.64  Aligned_cols=34  Identities=21%  Similarity=0.197  Sum_probs=29.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEe
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIAT   60 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~   60 (214)
                      .+++||+++|.| .|-.|..+++.|.+.|++  |+.+
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gak--vvav   65 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAK--AVTL   65 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCE--EEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCe--EEEE
Confidence            568999999999 688999999999999998  5544

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=89.00  E-value=0.34  Score=31.12  Aligned_cols=36  Identities=17%  Similarity=0.276  Sum_probs=29.6

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      .+|.++|.||+ -+|..+|..|++.|.+  |.++.+.+.
T Consensus        21 ~~~~vvVvGgG-~ig~E~A~~l~~~g~~--vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGGS-KTAVEYGCFFNATGRR--TVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSCT
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHhcchh--heEeeccch
Confidence            46788887765 8999999999999997  888877664

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.93  E-value=0.31  Score=31.80  Aligned_cols=34  Identities=29%  Similarity=0.312  Sum_probs=29.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      |.++|.||+ -||.++|..|++.|.+  |.++.|++.
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~--Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSK--TSLMIRHDK   56 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSSS
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcE--EEEEeeccc
Confidence            678888876 6999999999999998  888888664

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.89  E-value=0.32  Score=31.26  Aligned_cols=34  Identities=21%  Similarity=0.028  Sum_probs=27.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      |.++|.|| |-+|.++|..|++.|.+  |.++.|.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~--Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAK--THLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccE--EEEEeecch
Confidence            56777765 48999999999999997  888887664

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.81  E-value=0.18  Score=36.57  Aligned_cols=79  Identities=15%  Similarity=0.107  Sum_probs=56.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC-CceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +|.+||..|+++|--.++..+++  |.+  |+...++++-.+...+.+.+.+ .++.++.+|..+..          ...
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~--V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~  143 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTD--VYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPK  143 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSC--EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGG
T ss_pred             ccceEEEecCCCChhHHHHHHhh--Cce--eEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------ccc
Confidence            47899999988888888777776  344  8888888765555555555544 58999999986421          122


Q ss_pred             CCccEEEECccccC
Q 028056          106 GSLNLLINASGILS  119 (214)
Q Consensus       106 ~~vd~lv~nag~~~  119 (214)
                      +++|.++.+++...
T Consensus       144 ~pfD~Iiv~~a~~~  157 (215)
T d1jg1a_         144 APYDVIIVTAGAPK  157 (215)
T ss_dssp             CCEEEEEECSBBSS
T ss_pred             CcceeEEeeccccc
Confidence            68999988887653

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.78  E-value=0.07  Score=36.45  Aligned_cols=33  Identities=9%  Similarity=0.114  Sum_probs=27.7

Q ss_pred             CCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccc
Q 028056           36 ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGL   70 (214)
Q Consensus        36 ~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~   70 (214)
                      |+|-+|.++++.|.+.|.+  +++.+|+.++.+++
T Consensus         7 G~G~mG~al~~~l~~~~~~--i~v~~r~~~~~~~l   39 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHE--LIISGSSLERSKEI   39 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCE--EEEECSSHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCe--EEEEcChHHhHHhh
Confidence            6778999999999999987  89999987765543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.75  E-value=0.22  Score=35.17  Aligned_cols=40  Identities=15%  Similarity=-0.028  Sum_probs=33.2

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      ...+.++++.|.| .|.||+.+|+.+...|.+  |+..++...
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~--v~~~d~~~~   78 (188)
T d1sc6a1          39 SFEARGKKLGIIG-YGHIGTQLGILAESLGMY--VYFYDIENK   78 (188)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCE--EEEECSSCC
T ss_pred             cccccceEEEEee-cccchhhhhhhcccccce--Eeecccccc
Confidence            3578999999994 568999999999999997  888887543

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.69  E-value=1.9  Score=27.49  Aligned_cols=83  Identities=23%  Similarity=0.183  Sum_probs=53.1

Q ss_pred             cEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecCCCCccc--ccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           29 GVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGATG--LLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        29 k~vlItG~s---~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      |++.|.|+|   +..|..+.+.|.+.|++  |+.+..+.+....  .-..+.+.+..+..+. =...++.+.++++++.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~--V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vv-i~vp~~~~~~~l~~~~~   78 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFE--VLPVNPNYDEIEGLKCYRSVRELPKDVDVIV-FVVPPKVGLQVAKEAVE   78 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTCSEETTEECBSSGGGSCTTCCEEE-ECSCHHHHHHHHHHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCE--EEEEccccccccCccccccchhccccceEEE-EEeCHHHHHHHHHHHHh
Confidence            689999998   56899999999999997  8777655433221  2333333444444332 23456778888888876


Q ss_pred             HcCCccEEEECcc
Q 028056          104 KYGSLNLLINASG  116 (214)
Q Consensus       104 ~~~~vd~lv~nag  116 (214)
                      .  .+..++...|
T Consensus        79 ~--g~k~v~~~~g   89 (116)
T d1y81a1          79 A--GFKKLWFQPG   89 (116)
T ss_dssp             T--TCCEEEECTT
T ss_pred             c--CCceEEeccc
Confidence            5  3445544444

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=88.64  E-value=0.31  Score=31.42  Aligned_cols=34  Identities=12%  Similarity=0.037  Sum_probs=28.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      |+++|.||+ -+|.++|..|++.|.+  |.++.|.+.
T Consensus        23 ~~v~IiGgG-~iG~E~A~~l~~~g~~--Vtlv~~~~~   56 (117)
T d1onfa2          23 KKIGIVGSG-YIAVELINVIKRLGID--SYIFARGNR   56 (117)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHTTTCE--EEEECSSSS
T ss_pred             CEEEEECCc-hHHHHHHHHHHhcccc--ceeeehhcc
Confidence            677777764 8999999999999998  888887653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.61  E-value=0.24  Score=36.50  Aligned_cols=35  Identities=29%  Similarity=0.207  Sum_probs=30.0

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC   61 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~   61 (214)
                      .+++||+|+|-| -|..|..+|+.|.+.|++  |+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gak--vv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAK--VIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCE--EEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCe--EEEee
Confidence            468999999997 678999999999999997  65444

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=88.57  E-value=0.33  Score=34.42  Aligned_cols=40  Identities=13%  Similarity=0.035  Sum_probs=33.8

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      ...+.||++.|.|. |.||+.+|+.+..-|++  |+..++...
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~--v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFN--VLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCE--EEEECTTSC
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccc--eeeccCccc
Confidence            36689999999965 58999999999999997  888887654

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.53  E-value=0.16  Score=36.64  Aligned_cols=80  Identities=13%  Similarity=0.098  Sum_probs=50.3

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC-CceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP-ERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      .|.+||-.|+++|--..+..+......  +|+.++.+++..+.+.+.....+ .++.++..|..+..          ...
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g--~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~  142 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKG--LVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEF  142 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTC--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGG
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCC--cEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccc
Confidence            367899888776655544434443333  39999988877666555554433 36777777765321          112


Q ss_pred             CCccEEEECcccc
Q 028056          106 GSLNLLINASGIL  118 (214)
Q Consensus       106 ~~vd~lv~nag~~  118 (214)
                      +++|.++.+++..
T Consensus       143 ~~fD~I~~~~~~~  155 (213)
T d1dl5a1         143 SPYDVIFVTVGVD  155 (213)
T ss_dssp             CCEEEEEECSBBS
T ss_pred             cchhhhhhhccHH
Confidence            5799999888653

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=88.51  E-value=0.14  Score=36.05  Aligned_cols=78  Identities=13%  Similarity=0.088  Sum_probs=51.5

Q ss_pred             ccCcEEE-EecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC-CCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           26 WKGGVSL-VQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        26 l~~k~vl-ItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ++++++| +..|||.+|.+    .+++|+. .|+.++.+....+.+.+.+... ..++.++.+|+.         +.+..
T Consensus        42 ~~~~~vLDlfaGsG~~gie----alsrGa~-~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~---------~~l~~  107 (183)
T d2fpoa1          42 IVDAQCLDCFAGSGALGLE----ALSRYAA-GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAM---------SFLAQ  107 (183)
T ss_dssp             HTTCEEEETTCTTCHHHHH----HHHTTCS-EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHH---------HHHSS
T ss_pred             cchhhhhhhhccccceeee----EEecCcc-eeEEEEEeechhhHHHHHHhhccccceeeeeeccc---------ccccc
Confidence            5788887 55567777765    4568887 7999999988777655555443 236777776631         22222


Q ss_pred             HcCCccEEEECccc
Q 028056          104 KYGSLNLLINASGI  117 (214)
Q Consensus       104 ~~~~vd~lv~nag~  117 (214)
                      ....+|+++..+.+
T Consensus       108 ~~~~fDlIf~DPPY  121 (183)
T d2fpoa1         108 KGTPHNIVFVDPPF  121 (183)
T ss_dssp             CCCCEEEEEECCSS
T ss_pred             cccccCEEEEcCcc
Confidence            33578999888753

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=88.48  E-value=0.097  Score=38.35  Aligned_cols=61  Identities=10%  Similarity=-0.089  Sum_probs=43.8

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCC
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTV   90 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   90 (214)
                      ..++++||=.|++.|.   ++..|+++|.+  |+.++.+++-++.+.+.....+.++.++.+|+.+
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~--v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~   95 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKN--TWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN   95 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSE--EEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCc--cEeeccchhhhhhccccccccCccceeeccchhh
Confidence            3557899999988775   67788899987  8889988776555544444445567777777654

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.35  E-value=0.39  Score=36.75  Aligned_cols=77  Identities=16%  Similarity=0.161  Sum_probs=49.3

Q ss_pred             cccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcC--CCceeEEEecCCCHHHHHHHHHHHH
Q 028056           25 KWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRF--PERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        25 ~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      .++|++||-.|++.|+   ++..+++.|++ .|+.++.++ .++.+.+.....  ..++.++..|+.+.+.         
T Consensus        36 ~~~~~~VLDlGcGtG~---ls~~aa~~Ga~-~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~---------  101 (328)
T d1g6q1_          36 LFKDKIVLDVGCGTGI---LSMFAAKHGAK-HVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL---------  101 (328)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTCCS-EEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC---------
T ss_pred             cCCcCEEEEeCCCCCH---HHHHHHHhCCC-EEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC---------
Confidence            3589999999988764   34556778987 688888764 333333333322  3468888888765421         


Q ss_pred             HHcCCccEEEECcc
Q 028056          103 EKYGSLNLLINASG  116 (214)
Q Consensus       103 ~~~~~vd~lv~nag  116 (214)
                       .-+++|+++...-
T Consensus       102 -~~~~~D~i~se~~  114 (328)
T d1g6q1_         102 -PFPKVDIIISEWM  114 (328)
T ss_dssp             -SSSCEEEEEECCC
T ss_pred             -cccceeEEEEEec
Confidence             1136788877654

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=88.32  E-value=0.36  Score=33.66  Aligned_cols=75  Identities=19%  Similarity=0.234  Sum_probs=50.7

Q ss_pred             cCcEEEEecCCCc-hhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCC--CceeEEEecCCCHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRG-IGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFP--ERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        27 ~~k~vlItG~s~g-iG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      +|.+||=.|++.| ++.    ++++.+.+  |+.++.+++..+.+.+..++.+  .++.++++|..          +...
T Consensus        33 ~g~~VLDiGcGsG~~s~----~lA~~~~~--V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~   96 (186)
T d1l3ia_          33 KNDVAVDVGCGTGGVTL----ELAGRVRR--VYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALC   96 (186)
T ss_dssp             TTCEEEEESCTTSHHHH----HHHTTSSE--EEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHT
T ss_pred             CCCEEEEEECCeEcccc----cccccceE--EEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hccc
Confidence            5788887886655 443    45556654  9999999988777766665554  48889988742          1112


Q ss_pred             HcCCccEEEECccc
Q 028056          104 KYGSLNLLINASGI  117 (214)
Q Consensus       104 ~~~~vd~lv~nag~  117 (214)
                      ..+.+|.++.+...
T Consensus        97 ~~~~~D~v~~~~~~  110 (186)
T d1l3ia_          97 KIPDIDIAVVGGSG  110 (186)
T ss_dssp             TSCCEEEEEESCCT
T ss_pred             ccCCcCEEEEeCcc
Confidence            34578999877643

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=88.31  E-value=0.34  Score=34.83  Aligned_cols=33  Identities=30%  Similarity=0.234  Sum_probs=27.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      |.|+|.||+ -.|.++|.+|+++|.+  |.++.|+.
T Consensus         7 ~kVvVIGaG-iaGl~~A~~L~~~G~~--V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGSG-VIGLSSALILARKGYS--VHILARDL   39 (268)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSC
T ss_pred             CcEEEECcc-HHHHHHHHHHHHCCCC--EEEEeCCC
Confidence            568888765 7899999999999998  88888754

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=88.19  E-value=0.32  Score=35.98  Aligned_cols=38  Identities=18%  Similarity=0.146  Sum_probs=31.9

Q ss_pred             ccCcEEEEecCCCchhHHH-----HHHHHhcCCCcEEEEeecCCC
Q 028056           26 WKGGVSLVQGASRGIGLEF-----AKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        26 l~~k~vlItG~s~giG~~~-----a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      =+++.++|+.|=||.|+..     |..|+++|.+  |++++.+++
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~r--VllvD~Dp~   59 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFD--VHLTTSDPA   59 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCC--EEEEESCCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCc--EEEEeCCCC
Confidence            3578888888899999876     7899999998  888888865

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.18  E-value=0.4  Score=30.94  Aligned_cols=34  Identities=26%  Similarity=0.187  Sum_probs=28.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      +.++|.||+ -||.++|..|++.|.+  |.++.+++.
T Consensus        23 ~~i~IiG~G-~ig~E~A~~l~~~G~~--Vtiv~~~~~   56 (119)
T d3lada2          23 GKLGVIGAG-VIGLELGSVWARLGAE--VTVLEAMDK   56 (119)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCE--EEEEESSSS
T ss_pred             CeEEEECCC-hHHHHHHHHHHHcCCc--eEEEEeecc
Confidence            778888875 8999999999999998  777776654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.11  E-value=0.31  Score=31.61  Aligned_cols=34  Identities=32%  Similarity=0.404  Sum_probs=27.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      .|.++|.|| |.+|.++|..|++.|.+  |.++.+++
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~--Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYH--VKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCE--EEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccce--EEEEeccc
Confidence            467777776 48999999999999998  77777765

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.92  E-value=0.29  Score=33.90  Aligned_cols=36  Identities=11%  Similarity=-0.002  Sum_probs=28.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      +|+|+|.||+ -.|...|..|+++|++ -|.++.+++.
T Consensus         4 ~~kVaIIGaG-paGl~aA~~l~~~G~~-~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGAG-PASISCASFLARLGYS-DITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECCS-HHHHHHHHHHHHTTCC-CEEEEESSSS
T ss_pred             CCEEEEECCh-HHHHHHHHHHHHCCCC-eEEEEEecCc
Confidence            5778888875 7899999999999984 2777777664

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=87.90  E-value=0.41  Score=33.44  Aligned_cols=40  Identities=20%  Similarity=0.108  Sum_probs=32.8

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      ...+.|.|+|.||+ --|.+.|..++++|.+  |.++.+++.-
T Consensus        39 ~~~~~k~V~IIGaG-PAGL~AA~~la~~G~~--Vtl~E~~~~~   78 (179)
T d1ps9a3          39 PAVQKKNLAVVGAG-PAGLAFAINAAARGHQ--VTLFDAHSEI   78 (179)
T ss_dssp             SCSSCCEEEEECCS-HHHHHHHHHHHTTTCE--EEEEESSSSS
T ss_pred             CCCCCcEEEEECcc-HHHHHHHHHHHhhccc--eEEEeccCcc
Confidence            33457899999875 6889999999999998  9999887654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.83  E-value=0.43  Score=33.45  Aligned_cols=40  Identities=20%  Similarity=0.082  Sum_probs=33.6

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      ...+.+|++.|.| .|.||+.+++.+..-|.+  |+..++...
T Consensus        39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~--v~~~d~~~~   78 (184)
T d1ygya1          39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAY--VVAYDPYVS   78 (184)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCE--EEEECTTSC
T ss_pred             cccccceeeeecc-ccchhHHHHHHhhhccce--EEeecCCCC
Confidence            4568899999998 578999999999988887  888887654

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.69  E-value=0.18  Score=36.70  Aligned_cols=73  Identities=11%  Similarity=-0.042  Sum_probs=49.5

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      +.+++|=.|++.|   ..+..|++.|++  |+.++.++.-.+.+.+.....+.++.++++|+.+.+-           -.
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~--v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~  104 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYE--VVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KN  104 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CS
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceE--EEEEeeccccccccccccccccccchheehhhhhccc-----------cc
Confidence            4578999998875   335568889986  9999988865555555555555578888888755321           13


Q ss_pred             CccEEEECc
Q 028056          107 SLNLLINAS  115 (214)
Q Consensus       107 ~vd~lv~na  115 (214)
                      .+|.+++.-
T Consensus       105 ~fD~I~~~~  113 (251)
T d1wzna1         105 EFDAVTMFF  113 (251)
T ss_dssp             CEEEEEECS
T ss_pred             ccchHhhhh
Confidence            577776653

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.51  E-value=2.5  Score=27.46  Aligned_cols=90  Identities=20%  Similarity=0.221  Sum_probs=55.7

Q ss_pred             ccCcEEEEecCC---CchhHHHHHHHHhcCCCcEEEEeecCCCCcc--cccchhhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           26 WKGGVSLVQGAS---RGIGLEFAKQLLEKNDKGCVIATCRNPNGAT--GLLDLKNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        26 l~~k~vlItG~s---~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      ++-|+|.|.|+|   +.+|..+.+.|.+.| .+.|..+....+...  .....+.+.+..+..+.. ....+.+.+++++
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~-~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi-~vp~~~~~~~~~~   83 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII-VVPKRFVKDTLIQ   83 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE-CSCHHHHHHHHHH
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcC-CCcEEEeccCccccCCeEeecchhhcCCCCceEEE-ecChHHhHHHHHH
Confidence            455899999999   789999998887655 435877766544322  123333333443333322 2346788888988


Q ss_pred             HHHHcCCccEEEECcccc
Q 028056          101 IKEKYGSLNLLINASGIL  118 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~  118 (214)
                      +.+.. --.+++..+|+.
T Consensus        84 ~~~~g-~~~~vi~s~Gf~  100 (129)
T d2csua1          84 CGEKG-VKGVVIITAGFG  100 (129)
T ss_dssp             HHHHT-CCEEEECCCSST
T ss_pred             HHHcC-CCEEEEeccccc
Confidence            88762 223556666654

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.43  E-value=0.45  Score=34.29  Aligned_cols=39  Identities=26%  Similarity=0.183  Sum_probs=31.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      ..-..|.|+|.||+ --|...|.+++++|.+  |.++.++..
T Consensus        45 ~~~~~k~VvIIGaG-pAGl~aA~~l~~~G~~--v~l~E~~~~   83 (233)
T d1djqa3          45 QTKNKDSVLIVGAG-PSGSEAARVLMESGYT--VHLTDTAEK   83 (233)
T ss_dssp             CCSSCCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSSS
T ss_pred             cccCCceEEEEccc-HHHHHHHHHHHHhccc--eeeEeeccc
Confidence            33467899999986 5689999999999998  888877653

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=87.41  E-value=0.31  Score=35.74  Aligned_cols=31  Identities=23%  Similarity=0.190  Sum_probs=26.1

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      |+|.|| |-.|.++|.+|+++|.+  |+++++++
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~--V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKN--TALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCC--EEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCc--EEEEeCCC
Confidence            677765 57999999999999998  88888764

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=87.41  E-value=0.4  Score=30.61  Aligned_cols=34  Identities=21%  Similarity=0.157  Sum_probs=27.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      |.++|.|| |-+|.++|..|++.|.+  |.++.+.+.
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~--Vtlve~~~~   55 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQ--VSVVEARER   55 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCE--EEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccc--eEEEeeecc
Confidence            56666655 58999999999999997  877777653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.18  E-value=0.46  Score=30.77  Aligned_cols=34  Identities=24%  Similarity=0.223  Sum_probs=28.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      |.++|.||+ -||.++|..|++.|.+  |.++.+++.
T Consensus        24 ~~~vIiG~G-~ig~E~A~~l~~lG~~--Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIGGG-IIGLEMGSVYSRLGSK--VTVVEFQPQ   57 (122)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSSS
T ss_pred             CeEEEECCC-chHHHHHHHHHhhCcc--eeEEEeccc
Confidence            678888764 8999999999999998  877777664

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.15  E-value=0.28  Score=34.79  Aligned_cols=76  Identities=14%  Similarity=0.064  Sum_probs=51.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYG  106 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  106 (214)
                      ++.+||=.|+++|.   ++..|++.|++  |+.++.+++..+.+.+.....+.++..+..|..+...          ..+
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~--v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~----------~~~  101 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFE--VVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSF----------EDK  101 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCE--EEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCS----------CTT
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcc--cccccccccchhhhhhhhccccccccccccccccccc----------cCc
Confidence            34578999988765   55677888886  9999988776666655555555667777777765331          013


Q ss_pred             CccEEEECccc
Q 028056          107 SLNLLINASGI  117 (214)
Q Consensus       107 ~vd~lv~nag~  117 (214)
                      .+|+++.+...
T Consensus       102 ~fD~I~~~~~l  112 (226)
T d1ve3a1         102 TFDYVIFIDSI  112 (226)
T ss_dssp             CEEEEEEESCG
T ss_pred             CceEEEEecch
Confidence            67887776543

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=87.10  E-value=1.1  Score=36.30  Aligned_cols=82  Identities=10%  Similarity=-0.037  Sum_probs=52.7

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKE  103 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  103 (214)
                      ..++||+++|.|+. ....++++.|.+.|..  ++.+.......+..+......+.....  .|=.|..++++.+++.  
T Consensus       341 ~~l~Gkrv~i~~~~-~~~~~l~~~l~elGme--vv~~~~~~~~~~d~~~~~~~~~~~~~i--~~d~~~~el~~~i~~~--  413 (477)
T d1m1na_         341 PRLEGKRVMLYIGG-LRPRHVIGAYEDLGME--VVGTGYEFAHNDDYDRTMKEMGDSTLL--YDDVTGYEFEEFVKRI--  413 (477)
T ss_dssp             HHHTTCEEEECBSS-SHHHHTHHHHHTTTCE--EEEEEESSCCHHHHHTTTTTSCTTCEE--EESCBHHHHHHHHHHH--
T ss_pred             HhhcCCcEEEecCc-hhHHHHHHHHHHCCCE--EEEEeecCCChHHHHHHHHhcCCCcEE--ecCCCHHHHHHHHHhc--
Confidence            34789999998875 5788899999999997  655554333322233333333333332  3445667777777766  


Q ss_pred             HcCCccEEEECc
Q 028056          104 KYGSLNLLINAS  115 (214)
Q Consensus       104 ~~~~vd~lv~na  115 (214)
                         ++|+++-+.
T Consensus       414 ---~pDL~ig~~  422 (477)
T d1m1na_         414 ---KPDLIGSGI  422 (477)
T ss_dssp             ---CCSEEEECH
T ss_pred             ---CCCEEEECc
Confidence               789998664

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.06  E-value=0.38  Score=36.43  Aligned_cols=35  Identities=23%  Similarity=0.211  Sum_probs=30.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEee
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATC   61 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~   61 (214)
                      .+++||+++|.|- |..|..+|+.|.+.|++  |+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gak--vv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAK--CVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCE--EEEEE
Confidence            4789999999997 68999999999999998  65544

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=86.94  E-value=0.38  Score=33.80  Aligned_cols=41  Identities=17%  Similarity=0.039  Sum_probs=34.3

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      ....++++++.|.|. |.||+++++.+...|.+  |+..++...
T Consensus        38 ~~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~--v~~~d~~~~   78 (188)
T d2naca1          38 HAYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVH--LHYTDRHRL   78 (188)
T ss_dssp             TCCCCTTCEEEEECC-SHHHHHHHHHHGGGTCE--EEEECSSCC
T ss_pred             cceeccccceeeccc-cccchhhhhhhhccCce--EEEEeeccc
Confidence            346789999999985 57999999999999997  998887653

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=86.78  E-value=0.42  Score=33.94  Aligned_cols=40  Identities=25%  Similarity=0.147  Sum_probs=33.5

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      -..++||++.|.|-+ .||+.+|+.+..-|++  |+..++...
T Consensus        38 g~el~gk~vgIiG~G-~IG~~va~~l~~fg~~--V~~~d~~~~   77 (197)
T d1j4aa1          38 GREVRDQVVGVVGTG-HIGQVFMQIMEGFGAK--VITYDIFRN   77 (197)
T ss_dssp             BCCGGGSEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSCC
T ss_pred             CccccCCeEEEeccc-ccchhHHHhHhhhccc--ccccCcccc
Confidence            356899999999864 7999999999999997  888876543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=86.68  E-value=0.45  Score=34.69  Aligned_cols=41  Identities=24%  Similarity=0.255  Sum_probs=34.2

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      ..+++||+++|-|-+ ..|..+|+.|.+.|++  |+..+.+...
T Consensus        34 ~~~l~g~~v~IqG~G-nVG~~~a~~L~~~Gak--vv~~d~~~~~   74 (230)
T d1leha1          34 SDSLEGLAVSVQGLG-NVAKALCKKLNTEGAK--LVVTDVNKAA   74 (230)
T ss_dssp             SCCCTTCEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSCHHH
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCE--EEeecccHHH
Confidence            356899999999864 6999999999999998  8877776543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=86.65  E-value=0.6  Score=32.18  Aligned_cols=79  Identities=6%  Similarity=0.018  Sum_probs=40.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCC---cEEEEeecCCCCcccccchh----hcCCCceeEEEecCCCHHHHHHHHHHH
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDK---GCVIATCRNPNGATGLLDLK----NRFPERLDVLQLDLTVESTIEASAKSI  101 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~---~~vi~~~r~~~~~~~~~~~~----~~~~~~~~~~~~Dl~~~~~v~~~~~~~  101 (214)
                      -.+.|.||++.....++..++..-..   ..|+++|.++++++...+.+    ...+........  +|.   ++.+   
T Consensus         4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~---~eal---   75 (167)
T d1u8xx1           4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDP---EEAF---   75 (167)
T ss_dssp             EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCH---HHHH---
T ss_pred             ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CCh---hhcc---
Confidence            35667777553333333344432221   14999999988766422222    122233333321  121   1112   


Q ss_pred             HHHcCCccEEEECccccC
Q 028056          102 KEKYGSLNLLINASGILS  119 (214)
Q Consensus       102 ~~~~~~vd~lv~nag~~~  119 (214)
                          ..-|++|+.+|...
T Consensus        76 ----~~AD~Vvitag~~~   89 (167)
T d1u8xx1          76 ----TDVDFVMAHIRVGK   89 (167)
T ss_dssp             ----SSCSEEEECCCTTH
T ss_pred             ----CCCCEEEECCCcCC
Confidence                37899999999754

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.50  E-value=0.56  Score=30.83  Aligned_cols=37  Identities=24%  Similarity=0.177  Sum_probs=30.4

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      ++|+++|.|| |-+|.++|..|++.|.+  |.++.+.+.-
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~--Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMH--VTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCE--EEEECSSSST
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcc--eeeeeecccc
Confidence            3578888865 58999999999999998  8888877654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.44  E-value=1  Score=30.55  Aligned_cols=35  Identities=17%  Similarity=0.129  Sum_probs=27.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      ++.|+|.||+ .+|.++|..|.+.|.+.+|+.....
T Consensus         3 ~~~VvIIGgG-~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           3 NDNVVIVGTG-LAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             SCEEEEECCS-HHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCEEEECCc-HHHHHHHHHHHHcCCceEEEEecCc
Confidence            4677777764 8999999999999998566665554

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=86.28  E-value=0.37  Score=30.45  Aligned_cols=39  Identities=15%  Similarity=0.135  Sum_probs=30.1

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      .+++||+|+|.|++ -=|..+|.+|+..+.+  +++..|...
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~--v~~~~~r~~   66 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKH--PIYQSLLGG   66 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCS--SEEEECTTC
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCE--EEEEEecCc
Confidence            56899999999987 5678889999988776  555555443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.07  E-value=0.43  Score=30.95  Aligned_cols=35  Identities=23%  Similarity=0.109  Sum_probs=29.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      |.++|.||+ -||.++|..|.+.|.+  |.++.|++.-
T Consensus        26 ~~~viiG~G-~iglE~A~~~~~~G~~--Vtvi~~~~~~   60 (123)
T d1dxla2          26 KKLVVIGAG-YIGLEMGSVWGRIGSE--VTVVEFASEI   60 (123)
T ss_dssp             SEEEESCCS-HHHHHHHHHHHHHTCE--EEEECSSSSS
T ss_pred             CeEEEEccc-hHHHHHHHHHHhcCCe--EEEEEEcccc
Confidence            678888765 8999999999999998  8888887754

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=85.41  E-value=0.47  Score=31.87  Aligned_cols=34  Identities=9%  Similarity=0.075  Sum_probs=27.2

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCc
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGA   67 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~   67 (214)
                      +-|. |.|-+|..+|+.|+++|++  |++.++++...
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~--v~~~~~~~~~~   36 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVE--VVTSLEGRSPS   36 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCE--EEECCTTCCHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCe--EEEEcCchhHH
Confidence            4444 5689999999999999997  88888776543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.34  E-value=0.5  Score=33.25  Aligned_cols=32  Identities=16%  Similarity=0.118  Sum_probs=26.3

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      |+|.| +|--|..+|..|+++|.+  |+++.+++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~--V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKK--VLHIDKQDH   39 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCC--EEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCC--EEEEcCCCC
Confidence            67777 457789999999999998  888888764

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=85.26  E-value=0.4  Score=33.71  Aligned_cols=31  Identities=10%  Similarity=0.092  Sum_probs=26.2

Q ss_pred             cEEEEecCCCchhHH-----HHHHHHhcCCCcEEEEee
Q 028056           29 GVSLVQGASRGIGLE-----FAKQLLEKNDKGCVIATC   61 (214)
Q Consensus        29 k~vlItG~s~giG~~-----~a~~l~~~g~~~~vi~~~   61 (214)
                      |.++|||.+.|.|+.     +|+.|+++|.+  |.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~r--Vl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYR--TAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCC--EEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCe--EEEEC
Confidence            789999999898874     67899999998  76665

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.92  E-value=0.67  Score=32.97  Aligned_cols=35  Identities=20%  Similarity=0.293  Sum_probs=28.6

Q ss_pred             CcEEEEecCCCchhHH-----HHHHHHhcCCCcEEEEeecCC
Q 028056           28 GGVSLVQGASRGIGLE-----FAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        28 ~k~vlItG~s~giG~~-----~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      +|++.|+|+-||.|+.     +|..|++.|.+  |++++-+.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~--VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRK--VLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCC--EEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCC--EEEEeCCC
Confidence            6899999999999875     67788999998  87777553

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=84.82  E-value=0.19  Score=37.86  Aligned_cols=77  Identities=16%  Similarity=0.150  Sum_probs=53.2

Q ss_pred             CcEEEEec-CCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCC-ceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           28 GGVSLVQG-ASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPE-RLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        28 ~k~vlItG-~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +..++=.| |||-||.+++.++-  ..  .|+.++.++..++.+.+.....+. ++.+++.|+.+.-         .  .
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~~p--~~--~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~---------~--~  173 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASERP--DC--EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL---------A--G  173 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHCT--TS--EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG---------T--T
T ss_pred             ccceeeeehhhhHHHHHHHhhCC--cc--eeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc---------C--C
Confidence            34566556 56677777776542  23  599999999887766666555554 6999999986542         1  1


Q ss_pred             CCccEEEECccccC
Q 028056          106 GSLNLLINASGILS  119 (214)
Q Consensus       106 ~~vd~lv~nag~~~  119 (214)
                      .++|++|.|..+..
T Consensus       174 ~~fDlIvsNPPYi~  187 (274)
T d2b3ta1         174 QQFAMIVSNPPYID  187 (274)
T ss_dssp             CCEEEEEECCCCBC
T ss_pred             CceeEEEecchhhh
Confidence            47999999998764

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=84.06  E-value=0.6  Score=35.46  Aligned_cols=36  Identities=28%  Similarity=0.263  Sum_probs=28.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      +.|.++|.||+ --|..+|..|++.|.+  |.++.++..
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~--V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQ--VHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCE--EEEEESSSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCC--EEEEECCCC
Confidence            46889999875 5788889999999987  777776664

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=83.74  E-value=0.55  Score=34.93  Aligned_cols=33  Identities=18%  Similarity=0.307  Sum_probs=26.5

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      .|+|.||+ -+|.++|.+|+++|.+ .|++++++.
T Consensus         3 dViIIGaG-i~G~s~A~~La~~G~~-~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGAG-IVGTNLADELVTRGWN-NITVLDQGP   35 (305)
T ss_dssp             CEEEECCS-HHHHHHHHHHHHTTCC-CEEEECSSC
T ss_pred             CEEEECcC-HHHHHHHHHHHHcCCC-cEEEEeCCC
Confidence            47777765 8999999999999974 388888764

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=83.63  E-value=1.3  Score=28.22  Aligned_cols=82  Identities=7%  Similarity=0.104  Sum_probs=52.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKYGS  107 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  107 (214)
                      ||+|||.--...+-..+...|-+.|++  |+....+.   +++.+.+.+....+.+...++-+.+. -++++++++..+.
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~--v~~~a~~~---~~al~~~~~~~~dliilD~~mp~~~G-~e~~~~ir~~~~~   74 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYE--VAGEATNG---REAVEKYKELKPDIVTMDITMPEMNG-IDAIKEIMKIDPN   74 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCE--EEEEESSH---HHHHHHHHHHCCSEEEEECSCGGGCH-HHHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCc--eEEEECCH---HHHHHHHHhccCCEEEEecCCCCCCH-HHHHHHHHHhCCC
Confidence            789999999999999999999888887  65444332   22333444333445555444444443 4567777777777


Q ss_pred             ccEEEECc
Q 028056          108 LNLLINAS  115 (214)
Q Consensus       108 vd~lv~na  115 (214)
                      +-+++..+
T Consensus        75 ~pvi~ls~   82 (118)
T d1u0sy_          75 AKIIVCSA   82 (118)
T ss_dssp             CCEEEEEC
T ss_pred             CcEEEEEc
Confidence            77766554

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.53  E-value=0.27  Score=35.56  Aligned_cols=77  Identities=6%  Similarity=0.100  Sum_probs=48.8

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchh------------------hcCCCceeEEEecC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLK------------------NRFPERLDVLQLDL   88 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~------------------~~~~~~~~~~~~Dl   88 (214)
                      .+++||..|++.|   ..+..|++.|++  |+.++.++...+.+.+..                  ...+.++.++++|+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~--V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~  119 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHS--VVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSI  119 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCE--EEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCc--EEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcch
Confidence            5789999998875   346788999997  999998886544322111                  11234677888887


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEECccc
Q 028056           89 TVESTIEASAKSIKEKYGSLNLLINASGI  117 (214)
Q Consensus        89 ~~~~~v~~~~~~~~~~~~~vd~lv~nag~  117 (214)
                      .+....         ..+.+|+++-....
T Consensus       120 ~~l~~~---------~~~~fd~i~~~~~l  139 (229)
T d2bzga1         120 FDLPRT---------NIGKFDMIWDRGAL  139 (229)
T ss_dssp             GGGGGS---------CCCCEEEEEESSST
T ss_pred             hhcccc---------ccCceeEEEEEEEE
Confidence            644321         11356766655543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.36  E-value=0.67  Score=29.96  Aligned_cols=32  Identities=34%  Similarity=0.323  Sum_probs=25.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      +.++|.|| |-||.++|..|.+.|.+  |.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~--Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLD--VTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCC--EEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCe--EEEEEec
Confidence            45777766 48999999999999998  6555664

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=83.19  E-value=1.2  Score=31.31  Aligned_cols=40  Identities=15%  Similarity=0.029  Sum_probs=33.6

Q ss_pred             cccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           23 SVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        23 ~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      ...++||++.|.|.+ .||+.+|+.+...|.+  |+..++...
T Consensus        42 ~~~l~g~tvgIiG~G-~IG~~va~~l~~fg~~--v~~~d~~~~   81 (191)
T d1gdha1          42 GEKLDNKTLGIYGFG-SIGQALAKRAQGFDMD--IDYFDTHRA   81 (191)
T ss_dssp             BCCCTTCEEEEECCS-HHHHHHHHHHHTTTCE--EEEECSSCC
T ss_pred             cceecccceEEeecc-cchHHHHHHHHhhccc--ccccccccc
Confidence            467889999999865 7999999999999997  888887654

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=82.86  E-value=0.93  Score=31.10  Aligned_cols=78  Identities=15%  Similarity=0.125  Sum_probs=45.2

Q ss_pred             cCcEEE-EecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           27 KGGVSL-VQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        27 ~~k~vl-ItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +|+++| +..|+|.+|.    +.+++|++  ++.++.+++..+.+.+..+..+.....+..|.   +.   +........
T Consensus        41 ~g~~vLDl~~G~G~~~i----~a~~~ga~--vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d~---~~~~~~~~~  108 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVGL----EAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EV---FLPEAKAQG  108 (171)
T ss_dssp             TCCEEEEETCSSCHHHH----HHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HH---HHHHHHHTT
T ss_pred             CCCeEEEeccccchhhh----hhhhccch--hhhcccCHHHHhhhhHHHHhhccccceeeeeh---hc---ccccccccC
Confidence            577777 5555666664    45567886  77889888776665555554443333332222   11   223333333


Q ss_pred             CCccEEEECcc
Q 028056          106 GSLNLLINASG  116 (214)
Q Consensus       106 ~~vd~lv~nag  116 (214)
                      .++|+++.++.
T Consensus       109 ~~fD~If~DPP  119 (171)
T d1ws6a1         109 ERFTVAFMAPP  119 (171)
T ss_dssp             CCEEEEEECCC
T ss_pred             CccceeEEccc
Confidence            57999988864

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.73  E-value=0.27  Score=34.94  Aligned_cols=33  Identities=15%  Similarity=0.050  Sum_probs=27.7

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCC
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNG   66 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~   66 (214)
                      +.|. |.|-+|..+|..|++.|.+  |+..+.|++.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~--V~g~D~n~~~   35 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHE--VIGVDVSSTK   35 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCE--EEEECSCHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCc--EEEEeCCHHH
Confidence            4455 7789999999999999997  9999987654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=82.59  E-value=0.84  Score=32.84  Aligned_cols=34  Identities=29%  Similarity=0.181  Sum_probs=27.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      ++|+|.||+ --|..+|..|+++|.+  |+++.++++
T Consensus         5 ~kV~IiGaG-~aGl~~A~~L~~~G~~--v~v~Er~~~   38 (265)
T d2voua1           5 DRIAVVGGS-ISGLTAALMLRDAGVD--VDVYERSPQ   38 (265)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCE--EEEECSSSS
T ss_pred             CcEEEECcC-HHHHHHHHHHHHCCCC--EEEEeCCCC
Confidence            568888875 5788888899999998  888887654

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.56  E-value=0.81  Score=32.45  Aligned_cols=35  Identities=14%  Similarity=0.117  Sum_probs=28.4

Q ss_pred             cEEEEecCCCchhHH-----HHHHHHhcCCCcEEEEeecCCC
Q 028056           29 GVSLVQGASRGIGLE-----FAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        29 k~vlItG~s~giG~~-----~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      |++.|+++-||.|+.     +|..|+++|.+  |++++.+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~--VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHD--VTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCC--EEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCC--EEEEeCCCC
Confidence            789999999998874     57789999998  777776643

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=82.47  E-value=0.73  Score=33.75  Aligned_cols=31  Identities=23%  Similarity=0.249  Sum_probs=25.1

Q ss_pred             EEEecCCCchhHHHHHHHHhcCCCcEEEEeecCC
Q 028056           31 SLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNP   64 (214)
Q Consensus        31 vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~   64 (214)
                      |+|.|| |-.|.++|.+|+++|.+  |+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~--V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVK--TLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCC--EEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCc--EEEEeCCC
Confidence            566665 47899999999999998  88887753

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.20  E-value=1.9  Score=29.19  Aligned_cols=76  Identities=13%  Similarity=0.048  Sum_probs=38.2

Q ss_pred             EEEecCCCchhHHHHHH-HHhcCC---CcEEEEeecCCCCcccccchhhcC-CCceeEEEecCCCHHHHHHHHHHHHHHc
Q 028056           31 SLVQGASRGIGLEFAKQ-LLEKND---KGCVIATCRNPNGATGLLDLKNRF-PERLDVLQLDLTVESTIEASAKSIKEKY  105 (214)
Q Consensus        31 vlItG~s~giG~~~a~~-l~~~g~---~~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  105 (214)
                      +.|.||++ .|...+.. +++.-.   -..|++.|.++++++...+..... ..... +..- ++.+   +.+       
T Consensus         3 IaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~-~~~t-~~~~---~~l-------   69 (162)
T d1up7a1           3 IAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFK-VLIS-DTFE---GAV-------   69 (162)
T ss_dssp             EEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSE-EEEC-SSHH---HHH-------
T ss_pred             EEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCce-EEEe-cCcc---ccc-------
Confidence            66777754 55554432 332211   014999999988765433332211 11111 1111 1211   111       


Q ss_pred             CCccEEEECccccC
Q 028056          106 GSLNLLINASGILS  119 (214)
Q Consensus       106 ~~vd~lv~nag~~~  119 (214)
                      ..-|++|..+|..+
T Consensus        70 ~~aDvVVita~~~~   83 (162)
T d1up7a1          70 VDAKYVIFQFRPGG   83 (162)
T ss_dssp             TTCSEEEECCCTTH
T ss_pred             CCCCEEEEecccCC
Confidence            36799999998753

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=81.92  E-value=0.99  Score=29.27  Aligned_cols=35  Identities=20%  Similarity=0.178  Sum_probs=29.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      .+.++|.||+ -||.++|..|.+.|.+  |.++.+.+.
T Consensus        26 p~~vvIiGgG-~IG~E~A~~~~~~G~~--Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGGG-IIGLEMGTVYSTLGSR--LDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESCS-HHHHHHHHHHHHHTCE--EEEECSSSS
T ss_pred             CCeEEEECCC-HHHHHHHHHhhcCCCE--EEEEEeecc
Confidence            3788888875 8999999999999998  877777553

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=81.90  E-value=0.7  Score=34.21  Aligned_cols=36  Identities=19%  Similarity=0.127  Sum_probs=29.0

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      +-|.|+|.||+ --|...|..|+++|.+  |+++.+++.
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~--V~vlE~~~~   64 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQ--VTVLEASER   64 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCE--EEEECSSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCC--EEEEeCCCC
Confidence            34689999876 5688999999999997  888887653

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=81.83  E-value=0.97  Score=30.58  Aligned_cols=82  Identities=15%  Similarity=0.158  Sum_probs=48.7

Q ss_pred             cCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCC---CHHHHHHHHHHHHH
Q 028056           27 KGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLT---VESTIEASAKSIKE  103 (214)
Q Consensus        27 ~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~v~~~~~~~~~  103 (214)
                      +|+.+.|.+.+||.|..++..+.+.|.+  +.-.  +++..+++.+.+-....  .--..|++   +.+...+.++.+.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~--l~~l--~~~t~~~L~~~lp~~~~--~~NPlD~~~~~~~~~~~~~l~~~~~   75 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLK--LATL--EEKTIEELRSFLPPMAA--VKNPVDMIASARGEDYYRTAKLLLQ   75 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCE--ECCC--CHHHHHHHHHHSCTTCE--ESSEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCc--cCCC--CHHHHHHHHHhCCCccc--CCCcccccCCCCHHHHHHHHHHHHc
Confidence            6889999999999999999999998875  4322  22222223332221111  11123443   45666666766655


Q ss_pred             HcCCccEEEECc
Q 028056          104 KYGSLNLLINAS  115 (214)
Q Consensus       104 ~~~~vd~lv~na  115 (214)
                      . +.+|.++...
T Consensus        76 d-~~vd~v~v~~   86 (163)
T d2csua3          76 D-PNVDMLIAIC   86 (163)
T ss_dssp             S-TTCSEEEEEE
T ss_pred             C-CCcCEEEEee
Confidence            4 6788765443

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.76  E-value=0.66  Score=32.85  Aligned_cols=39  Identities=21%  Similarity=0.382  Sum_probs=31.2

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      .+++||.|+|.|++. -|..+|.++++.+..  +....|...
T Consensus        28 ~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~--~~~~~~~~~   66 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGS-SGIQVSPQIAKQAAE--LFVFQRTPH   66 (235)
T ss_dssp             CCCBTCEEEEECCSH-HHHHHHHHHHHHBSE--EEEEESSCC
T ss_pred             CCCCCCEEEEECCCc-cHHHHHHHHHhhhcc--ccccccccc
Confidence            468999999998875 489999999999987  666665543

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=81.66  E-value=0.19  Score=34.93  Aligned_cols=78  Identities=5%  Similarity=-0.112  Sum_probs=40.4

Q ss_pred             EEEEecC-CCchhHHHHHHHHhcCC-C-cEEEEeecCCCC--cccccch----hhcCCCceeEEEecCCCHHHHHHHHHH
Q 028056           30 VSLVQGA-SRGIGLEFAKQLLEKND-K-GCVIATCRNPNG--ATGLLDL----KNRFPERLDVLQLDLTVESTIEASAKS  100 (214)
Q Consensus        30 ~vlItG~-s~giG~~~a~~l~~~g~-~-~~vi~~~r~~~~--~~~~~~~----~~~~~~~~~~~~~Dl~~~~~v~~~~~~  100 (214)
                      .+.|.|| +.+.+..++..+..... . ..|++++.+++.  ++.+...    ....+.++...  ..+|..+   .+  
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~--~~td~~~---al--   75 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH--LTLDRRR---AL--   75 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE--EESCHHH---HH--
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee--ecCCchh---hc--
Confidence            3455554 56777777665554321 1 259999998754  2222111    11222222222  3333321   11  


Q ss_pred             HHHHcCCccEEEECccccC
Q 028056          101 IKEKYGSLNLLINASGILS  119 (214)
Q Consensus       101 ~~~~~~~vd~lv~nag~~~  119 (214)
                           ..-|++|+.++...
T Consensus        76 -----~gaDvVv~ta~~~~   89 (169)
T d1s6ya1          76 -----DGADFVTTQFRVGG   89 (169)
T ss_dssp             -----TTCSEEEECCCTTH
T ss_pred             -----CCCCEEEEccccCC
Confidence                 36799999999764

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=81.25  E-value=0.79  Score=34.35  Aligned_cols=31  Identities=19%  Similarity=0.171  Sum_probs=21.0

Q ss_pred             cEEEEecCCCchhH-----HHHHHHHhcCCCcEEEEeec
Q 028056           29 GVSLVQGASRGIGL-----EFAKQLLEKNDKGCVIATCR   62 (214)
Q Consensus        29 k~vlItG~s~giG~-----~~a~~l~~~g~~~~vi~~~r   62 (214)
                      |+++|++|+.| |.     +++++|.++|++  |..++.
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~e--V~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQ--VRWLGT   36 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCE--EEEEEC
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCE--EEEEEe
Confidence            45666665444 55     588999999998  655543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=80.96  E-value=0.84  Score=31.31  Aligned_cols=41  Identities=17%  Similarity=0.227  Sum_probs=35.2

Q ss_pred             ccccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           22 ASVKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        22 ~~~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      +...+.||+++|.|=. .+|+.+|.++...|++  |+++..+|-
T Consensus        17 t~~~laGk~vvV~GYG-~vGrG~A~~~rg~Ga~--V~V~E~DPi   57 (163)
T d1v8ba1          17 TDFLISGKIVVICGYG-DVGKGCASSMKGLGAR--VYITEIDPI   57 (163)
T ss_dssp             HCCCCTTSEEEEECCS-HHHHHHHHHHHHHTCE--EEEECSCHH
T ss_pred             hCceecCCEEEEeccc-ccchhHHHHHHhCCCE--EEEEecCch
Confidence            3466899999999864 7999999999999997  999888773

>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Escherichia coli [TaxId: 562]

Probab=80.82  E-value=2.2  Score=33.88  Aligned_cols=73  Identities=12%  Similarity=0.050  Sum_probs=45.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEEEecCCCHHHHHHHHHHHH
Q 028056           28 GGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVLQLDLTVESTIEASAKSIK  102 (214)
Q Consensus        28 ~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  102 (214)
                      ++..++...||..|.+++..++..+.- .++++.-...-.+..+.++...+.+++.+.+| .+.+++++++.++.
T Consensus       125 ~~~~Il~ATSGDTG~Aa~~a~~~~~~i-~~~vl~P~g~vS~~Q~~Qmtt~g~nv~vi~V~-G~fDDcq~lvk~~f  197 (428)
T d1vb3a1         125 KPVTILTATSGDTGAAVAHAFYGLPNV-KVVILYPRGKISPLQEKLFCTLGGNIETVAID-GDFDACQALVKQAF  197 (428)
T ss_dssp             CCEEEEEECSSSHHHHHHHHTTTCTTE-EEEEEEETTCSCHHHHHHHHSCCTTEEEEEEE-SCHHHHHHHHHHGG
T ss_pred             ccceeeecCCCCcchhHHHHHhCcccc-ceEEEecCCCCcHHHHHHHhhccCCceEEecC-CChhHHHHHHHHHh
Confidence            455667777889999999999876542 35555433221111222333456788888777 45677777777775

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.73  E-value=0.56  Score=38.59  Aligned_cols=38  Identities=16%  Similarity=0.049  Sum_probs=31.4

Q ss_pred             ccccCcEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecC
Q 028056           24 VKWKGGVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRN   63 (214)
Q Consensus        24 ~~l~~k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~   63 (214)
                      ..|++.+|+|.|+ ||+|.++++-|+..|.. .+.++|.+
T Consensus        21 ~~L~~s~VlvvG~-gglG~Ei~knLvl~GVg-~itivD~d   58 (529)
T d1yova1          21 EALESAHVCLINA-TATGTEILKNLVLPGIG-SFTIIDGN   58 (529)
T ss_dssp             HHHHHCEEEECCC-SHHHHHHHHHHHTTTCS-EEEEECCS
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHhcCC-EEEEEcCC
Confidence            3567789999987 78999999999999987 67776653

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=80.47  E-value=4.8  Score=29.94  Aligned_cols=53  Identities=6%  Similarity=-0.086  Sum_probs=34.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCCCcccccchhhcCCCceeEE
Q 028056           29 GVSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPNGATGLLDLKNRFPERLDVL   84 (214)
Q Consensus        29 k~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~   84 (214)
                      ...+|+..+|..|.++|..-+..|.+ .++++..+...  ...+.++.++.+++.+
T Consensus        69 ~~~vv~~ssGN~g~a~A~~a~~~g~~-~~i~~p~~~~~--~k~~~l~~~Ga~vi~~  121 (318)
T d1v71a1          69 KAGVLTFSSGNHAQAIALSAKILGIP-AKIIMPLDAPE--AKVAATKGYGGQVIMY  121 (318)
T ss_dssp             HHCEEECCSSHHHHHHHHHHHHTTCC-EEEEEETTCCH--HHHHHHHHTTCEEEEE
T ss_pred             cceeeeeccchhhHHHHHhhcccccc-eeecccccccH--HHHHHHHHcCCcEEec
Confidence            34588888899999999988999998 55666554432  1233344445554444

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=80.20  E-value=0.86  Score=32.97  Aligned_cols=33  Identities=18%  Similarity=0.172  Sum_probs=26.8

Q ss_pred             EEEEecCCCchhHHHHHHHHhcCCCcEEEEeecCCC
Q 028056           30 VSLVQGASRGIGLEFAKQLLEKNDKGCVIATCRNPN   65 (214)
Q Consensus        30 ~vlItG~s~giG~~~a~~l~~~g~~~~vi~~~r~~~   65 (214)
                      .|+|.|| |--|...|.+|+++|.+  |+++.+++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~--V~vlE~~~~   34 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTD--AVLLESSAR   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCC--EEEECSSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCC--EEEEecCCC
Confidence            3778887 56789999999999998  888877653