BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028057
(214 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B8HUU1|NDHN_CYAP4 NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain
PCC 7425 / ATCC 29141) GN=ndhN PE=3 SV=1
Length = 158
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 12/147 (8%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+++ D+EK A+ IY P EGG+EGRY RLR GY L +SA GLGD + LT+V+ V P
Sbjct: 9 QFIQDLEKSGALGIYVPSEGGFEGRYQRRLRAAGYSTLHISAPGLGDLPSYLTQVHGVRP 68
Query: 132 QPIAR------------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLP 179
+ + ++ PP V+Y L LPP A+GLV+W+I+ K LS+ EL +L++LP
Sbjct: 69 PHLGKSTQGNTDWGVKTFFLPPLVNYHLENLPPKARGLVLWMIDGKRLSRQELAYLSILP 128
Query: 180 TLRPKVRVIAECGNWRKFMWKPLKEIA 206
PKV+++ E G R+F W+PLKE+A
Sbjct: 129 AQEPKVKIVIELGGDRQFRWQPLKEMA 155
>sp|Q8YPH8|NDHN_NOSS1 NAD(P)H-quinone oxidoreductase subunit N OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ndhN PE=3 SV=1
Length = 162
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 86/143 (60%), Gaps = 12/143 (8%)
Query: 74 LSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPQP 133
+ D+EK ++ +Y P EGG+EGRY RLR GY L +ARGLGD LT V+ V P
Sbjct: 11 IRDLEKFGSVGVYVPLEGGFEGRYRRRLRAAGYTTLQFTARGLGDVAAYLTGVHGVRPPH 70
Query: 134 IAR------------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTL 181
+ + +Y PP V +L LPP +KGLV+WIIE +LS E++FL LP+L
Sbjct: 71 LGKKSSGNGAAVGNVYYLPPIVGSQLEHLPPKSKGLVLWIIEGHILSDQEVEFLTSLPSL 130
Query: 182 RPKVRVIAECGNWRKFMWKPLKE 204
P+V+V+ E G R F WK LK+
Sbjct: 131 EPRVKVVVERGGDRTFRWKALKD 153
>sp|B7JYJ3|NDHN_CYAP8 NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain
PCC 8801) GN=ndhN PE=3 SV=1
Length = 158
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 91/145 (62%), Gaps = 12/145 (8%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPQ 132
++ +EK ++A+Y P EGG+EGRY RLR GY+ L+ARGLGD L V+ V P
Sbjct: 10 FIRALEKSGSLAVYAPLEGGFEGRYQRRLRTNGYHTFSLTARGLGDVSAYLMGVHGVRPP 69
Query: 133 PIAR------------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPT 180
+ + ++ PP Y+L LPP +KGLV+WI+E +LS++EL++LA LPT
Sbjct: 70 HLGKKNIGQEAAVGPVYFVPPIAAYQLETLPPKSKGLVLWILEGFILSQTELEYLANLPT 129
Query: 181 LRPKVRVIAECGNWRKFMWKPLKEI 205
L P+++V+ E G R F WKPL E+
Sbjct: 130 LEPRLKVVIELGGERYFSWKPLPEV 154
>sp|Q3MFC2|NDHN_ANAVT NAD(P)H-quinone oxidoreductase subunit N OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=ndhN PE=3 SV=1
Length = 162
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 85/143 (59%), Gaps = 12/143 (8%)
Query: 74 LSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPQP 133
+ D+EK ++ +Y P EGG+EGRY RLR GY L +ARGLGD LT V+ V P
Sbjct: 11 IRDLEKFGSVGVYVPLEGGFEGRYRRRLRAAGYTTLQFTARGLGDVAAYLTGVHGVRPPH 70
Query: 134 IAR------------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTL 181
+ + +Y PP V +L LPP +KGLV+WIIE +LS E++FL LP L
Sbjct: 71 LGKKSSGNGAAVGNVYYLPPIVGSQLEHLPPKSKGLVLWIIEGHILSDQEVEFLTDLPKL 130
Query: 182 RPKVRVIAECGNWRKFMWKPLKE 204
P+V+V+ E G R F WK LK+
Sbjct: 131 EPRVKVVVERGGDRTFRWKALKD 153
>sp|B2ITQ6|NDHN_NOSP7 NAD(P)H-quinone oxidoreductase subunit N OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=ndhN PE=3 SV=1
Length = 158
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 86/143 (60%), Gaps = 12/143 (8%)
Query: 74 LSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPQP 133
+ D+EK A+ +Y P EGGYEGRY RLR GY L ++A+GLGD LT+++ V P
Sbjct: 11 IRDLEKFGALGVYVPLEGGYEGRYQRRLRAAGYTTLHITAKGLGDVAAYLTRIHGVRPPH 70
Query: 134 IAR------------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTL 181
+ + +Y PP +D L LPP +KGLV+WIIE +LS EL++L LP L
Sbjct: 71 LGKKSTGSGAAVGQVYYLPPILDSHLEQLPPKSKGLVLWIIEGHILSNEELEYLTNLPQL 130
Query: 182 RPKVRVIAECGNWRKFMWKPLKE 204
P+V+V+ E G R F W L++
Sbjct: 131 EPRVKVVIERGGDRAFRWTSLEK 153
>sp|Q110A6|NDHN_TRIEI NAD(P)H-quinone oxidoreductase subunit N OS=Trichodesmium
erythraeum (strain IMS101) GN=ndhN PE=3 SV=1
Length = 158
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 88/143 (61%), Gaps = 12/143 (8%)
Query: 74 LSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPQP 133
+ D+EK ++A+Y P EGG+EGRY RLR GY ++ARGLGD LT V+ V P
Sbjct: 11 IRDLEKSGSLAVYPPLEGGFEGRYQRRLRASGYVSESITARGLGDLAMYLTGVHGVRPPH 70
Query: 134 IAR------------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTL 181
+ + +Y PP V+Y+L LPP AKGLV+WI+E ++LS E+++L +LP
Sbjct: 71 LGKKTVGNGPAVGYVYYVPPIVNYKLEHLPPKAKGLVLWIMEGQILSSQEIEYLTVLPKS 130
Query: 182 RPKVRVIAECGNWRKFMWKPLKE 204
P+V+VI E G R F W PL+
Sbjct: 131 EPRVKVIVEMGGDRFFRWTPLQN 153
>sp|B7KEE5|NDHN_CYAP7 NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain
PCC 7424) GN=ndhN PE=3 SV=1
Length = 158
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 89/144 (61%), Gaps = 12/144 (8%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPQ 132
++ +EK A+ +Y P EGG+EGRY RLR GY +L+ARGLGD + LT ++ V P
Sbjct: 10 FIRALEKSGALGVYVPLEGGFEGRYQRRLRANGYTPYNLTARGLGDLSSYLTGIHGVRPP 69
Query: 133 PIAR------------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPT 180
+ + ++ PP Y+L LPP +KGLV+WIIE +LS++E+++L LP
Sbjct: 70 HLGKKNIGQDAAVGPVYFVPPIATYQLETLPPKSKGLVLWIIEGMILSRAEIEYLTYLPQ 129
Query: 181 LRPKVRVIAECGNWRKFMWKPLKE 204
P+++++ E G R F W+PL++
Sbjct: 130 QEPRLKIVVEMGGERYFRWQPLEQ 153
>sp|Q5N0W6|NDHN_SYNP6 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndhN
PE=3 SV=1
Length = 158
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 84/147 (57%), Gaps = 12/147 (8%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++L +E+ A+A+Y P EGGYEGRYL RLR GY L SARGLGDP L ++ V P
Sbjct: 9 KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68
Query: 132 QPIARW------------YFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLP 179
+ + Y P V Y L LP +AKGLV+W++E VLS EL + LP
Sbjct: 69 PHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLP 128
Query: 180 TLRPKVRVIAECGNWRKFMWKPLKEIA 206
P+++V+ E G R F W+PL +A
Sbjct: 129 QAEPRLKVVIEMGGDRGFSWQPLAAVA 155
>sp|Q31L05|NDHN_SYNE7 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus elongatus
(strain PCC 7942) GN=ndhN PE=3 SV=1
Length = 158
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 84/147 (57%), Gaps = 12/147 (8%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++L +E+ A+A+Y P EGGYEGRYL RLR GY L SARGLGDP L ++ V P
Sbjct: 9 KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68
Query: 132 QPIARW------------YFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLP 179
+ + Y P V Y L LP +AKGLV+W++E VLS EL + LP
Sbjct: 69 PHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLP 128
Query: 180 TLRPKVRVIAECGNWRKFMWKPLKEIA 206
P+++V+ E G R F W+PL +A
Sbjct: 129 QAEPRLKVVIEMGGDRGFSWQPLAAVA 155
>sp|B1WYX9|NDHN_CYAA5 NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain
ATCC 51142) GN=ndhN PE=3 SV=1
Length = 158
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 87/145 (60%), Gaps = 12/145 (8%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPQ 132
++ +EK A+ +Y P EGG+EGRY RLR GY L L+ARGLGD L V+ V P
Sbjct: 10 FVRALEKSGALGVYAPLEGGFEGRYQRRLRTNGYDSLSLTARGLGDVSAYLMGVHGVRPP 69
Query: 133 PIAR------------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPT 180
+ + ++ PP Y+L +L P +KGLV+WI+E +LSK+EL++L LP
Sbjct: 70 HLGKKNIGQGAAVGPIYFVPPIAAYQLESLSPQSKGLVLWILEGYILSKAELEYLVSLPQ 129
Query: 181 LRPKVRVIAECGNWRKFMWKPLKEI 205
P+++V+ E G R F W+PL+ +
Sbjct: 130 QEPRIKVVVELGGERYFRWEPLENL 154
>sp|B0JY52|NDHN_MICAN NAD(P)H-quinone oxidoreductase subunit N OS=Microcystis aeruginosa
(strain NIES-843) GN=ndhN PE=3 SV=1
Length = 158
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 85/144 (59%), Gaps = 12/144 (8%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPQ 132
++ D+E++ A+ +Y P EGGYEGRY RLR GY L ++ARGLGD LT ++ V P
Sbjct: 10 FIRDLEQYGALGVYAPLEGGYEGRYQRRLRATGYNVLHITARGLGDLSAYLTGIHGVRPP 69
Query: 133 PIAR------------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPT 180
+ + ++ PP Y+L LPP +KGLV+WIIE+ VLS E Q+L L
Sbjct: 70 HLGKKNIGREAAVGPVYFIPPIATYQLENLPPKSKGLVIWIIESFVLSSEEKQYLINLSQ 129
Query: 181 LRPKVRVIAECGNWRKFMWKPLKE 204
P+++ + E G R F W+PL +
Sbjct: 130 QEPRLKFVLELGGERYFRWQPLSK 153
>sp|B0CA85|NDHN_ACAM1 NAD(P)H-quinone oxidoreductase subunit N OS=Acaryochloris marina
(strain MBIC 11017) GN=ndhN PE=3 SV=1
Length = 151
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+++ +E+ A+ IY P EGG+EGRY RLR GY L +SA G+GD + T V+ V P
Sbjct: 9 KFIRTIEQSGAVGIYVPSEGGFEGRYKRRLRATGYLTLFVSAPGMGDLASYFTDVHGVRP 68
Query: 132 -----QPIARWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVR 186
I ++ PP V Y+L LPP AKGL +W+ + K L+K EL +L+ + P+++
Sbjct: 69 PHLGKNQIRTYFLPPFVTYQLENLPPQAKGLALWLYDGKRLAKQELAYLSAITASEPRLK 128
Query: 187 VIAECGNWRKFMWKPLKEI 205
V+ E G R F W+PL +I
Sbjct: 129 VVVELGGARSFEWQPLSDI 147
>sp|B1XK97|NDHN_SYNP2 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhN PE=3 SV=1
Length = 157
Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 89/146 (60%), Gaps = 13/146 (8%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP- 131
++ VEK A+A+Y P EGG+EGRY+ RLR GY ++L+ARGLGD LT+ + + P
Sbjct: 10 FIRTVEKSGAVAVYAPLEGGFEGRYVRRLRCSGYSVVNLTARGLGDVAAYLTQYHGIRPP 69
Query: 132 ----QPIA--------RWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLP 179
+ IA R+Y P Y+L LP +KG+++WIIE VLS+ E ++L L
Sbjct: 70 HLGKKDIAGSGAAVGLRYYVPGIASYQLENLPQKSKGIILWIIEGFVLSRQEQEYLVSLT 129
Query: 180 TLRPKVRVIAECGNWRKFMWKPLKEI 205
P+++V+ E G R+F +KPL ++
Sbjct: 130 QDNPQIKVVVEMGGDRQFSFKPLADL 155
>sp|Q7NEV8|NDHN_GLOVI NAD(P)H-quinone oxidoreductase subunit N OS=Gloeobacter violaceus
(strain PCC 7421) GN=ndhN PE=3 SV=1
Length = 159
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 64 DLLKPDLGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTL 123
+L+ + R+++DVEKH +IA++ P EGG EG Y RLR +GY ++A+GLGD L
Sbjct: 5 NLVLDNGSRFVADVEKHSSIALWAPPEGGIEGNYQRRLRGIGYRTQIITAKGLGDISRFL 64
Query: 124 TKVYPVCPQPIAR-----WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALL 178
+ + V P + + + PPE+ + LP SAKG V+WIIE KVLS EL+ L L
Sbjct: 65 LESHGVRPAHLGKKDKRVFTLPPELAIYMDTLPASAKGFVLWIIEGKVLSLFELESLVGL 124
Query: 179 PTLRPKVRVIAECGNWRKFMWKPLKEIAGLTQEG 212
P PK++VI E G+ W PL++ EG
Sbjct: 125 PAAVPKLKVIVEVGSDYNIRWMPLEQAVSKMAEG 158
>sp|Q8DJU2|NDHN_THEEB NAD(P)H-quinone oxidoreductase subunit N OS=Thermosynechococcus
elongatus (strain BP-1) GN=ndhN PE=1 SV=1
Length = 150
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 84/138 (60%), Gaps = 5/138 (3%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+++ D+E A+A++ P EGG+EGRY RLR GY L +SA GLGD LT+ + + P
Sbjct: 8 QFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRP 67
Query: 132 -----QPIARWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVR 186
+ I ++ PP V Y L LPP+AKGLV+W+I+ K LSK E +LA L PK +
Sbjct: 68 AHTGKEDIRVYFQPPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFK 127
Query: 187 VIAECGNWRKFMWKPLKE 204
V+ E G R W+PL +
Sbjct: 128 VVVEVGGDRVVRWEPLAD 145
>sp|P74069|NDHN_SYNY3 NAD(P)H-quinone oxidoreductase subunit N OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ndhN PE=1 SV=1
Length = 161
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 83/142 (58%), Gaps = 12/142 (8%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPQ 132
++ +E A+A+Y P EGGYEGRY RLR GY + LSARGLGD E L +V+ V P
Sbjct: 13 FIRALENDGALAVYAPLEGGYEGRYQRRLRANGYASISLSARGLGDVEAYLMQVHGVRPA 72
Query: 133 PIAR------------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPT 180
+ + ++ P Y+L LP +KGLV+WI+E +LS++E+Q L L
Sbjct: 73 HLGKKNIAQEGAVGPIYFAQPIAGYQLENLPAQSKGLVLWILEGYILSQTEIQDLISLTK 132
Query: 181 LRPKVRVIAECGNWRKFMWKPL 202
PK++V+ E G R F W+PL
Sbjct: 133 RVPKLKVVLEMGGDRVFRWQPL 154
>sp|Q2JIJ7|NDHN_SYNJB NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ndhN PE=3 SV=1
Length = 147
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 5/144 (3%)
Query: 65 LLKPDLGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLT 124
LL +++ +E+ A+AIY EGG EG YL RLR GY + LS++G+GD + LT
Sbjct: 2 LLVGSGAKFVQQLEQAGALAIYVTPEGGSEGHYLRRLRGAGYEVVTLSSKGIGDLASYLT 61
Query: 125 KVYPVCPQPIAR-----WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLP 179
+++ V P + + ++FP ++ A LPP AKGLV W E V S+ EL +L L
Sbjct: 62 RIHGVRPATLGKSERRTYFFPALIEQYRATLPPKAKGLVFWFYEGHVFSQQELSYLVKLS 121
Query: 180 TLRPKVRVIAECGNWRKFMWKPLK 203
V+ + E G R W+PL+
Sbjct: 122 REDKGVKFVVELGRERSIRWQPLQ 145
>sp|Q2JVL1|NDHN_SYNJA NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain JA-3-3Ab) GN=ndhN PE=3 SV=1
Length = 147
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Query: 65 LLKPDLGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLT 124
LL +++ +E+ A+AI+ EGG EG YL RLR GY + LS++G+GD + LT
Sbjct: 2 LLVGSGAKFVQQLEQCGALAIFVTPEGGSEGHYLRRLRGAGYEVVTLSSKGIGDLASYLT 61
Query: 125 KVYPVCPQPIAR-----WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLP 179
+ V P + + +++P ++ A LPP AKGLV W E VLS+ EL +L L
Sbjct: 62 SSHGVRPATLGKSQRRTYFYPSLIEQYRATLPPKAKGLVFWFYEGHVLSRQELSYLVKLS 121
Query: 180 TLRPKVRVIAECGNWRKFMWKPLK 203
V+ + E G R W+PL+
Sbjct: 122 QEDKGVKFVVELGRERSIRWQPLQ 145
>sp|A2BYT7|NDHN_PROM5 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9515) GN=ndhN PE=3 SV=1
Length = 156
Score = 90.5 bits (223), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 9/142 (6%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++K+K +A++ P EGGYE R L R+R G+ SARGLGDPE L ++ + P
Sbjct: 9 KFHNDLKKNKCLAMFAPLEGGYETRLLRRMRAKGFKTYITSARGLGDPEVFLLNLHGIRP 68
Query: 132 -----QPIARWYFPPEVDYRL----AALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLR 182
Q I R EV + + K ++W++E +VLS+SEL+ L LPT
Sbjct: 69 PHLGHQSIGRNGALGEVQQVIPQASELFNENDKDKLLWLLEGQVLSQSELENLIKLPTAD 128
Query: 183 PKVRVIAECGNWRKFMWKPLKE 204
K++++ E G RK WK L +
Sbjct: 129 NKLKIVVEMGGSRKLEWKSLND 150
>sp|Q7U4K1|NDHN_SYNPX NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain WH8102) GN=ndhN PE=3 SV=1
Length = 153
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 8/136 (5%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP---- 131
D+E H +A++ P EGG E R L RLR GY SARGLGDPE LT+ + + P
Sbjct: 13 DLEAHGCLAVHAPLEGGAETRLLRRLRGAGYRTRLWSARGLGDPEVFLTQKHGIRPPHLG 72
Query: 132 -QPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRV 187
Q + R EV +L L + +W++E +VLS+SEL+ L L + P++R+
Sbjct: 73 HQSVGRGAAVGEVQEVVPQLGDLLDGDAQVALWLLEGQVLSQSELRSLCDLCSREPRLRI 132
Query: 188 IAECGNWRKFMWKPLK 203
I E G R W+P+
Sbjct: 133 IVEMGGARSLRWQPMS 148
>sp|A2C500|NDHN_PROM1 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain NATL1A) GN=ndhN PE=3 SV=1
Length = 154
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 8/141 (5%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D+E +AI +P EGG E R L RLR GY SARGLGDP LT+++ + P
Sbjct: 9 KFRTDLESFGCLAILSPLEGGAETRLLRRLRASGYQTQITSARGLGDPVVFLTQLHGIRP 68
Query: 132 -----QPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRP 183
Q + R EV +L L K LV+W++E +VLSKSEL ++ L P
Sbjct: 69 PHLGHQNVGRNGALGEVQQVIPQLNELLVEDKPLVLWLLEGQVLSKSELLAISNLCQKEP 128
Query: 184 KVRVIAECGNWRKFMWKPLKE 204
+++++ E G R W+PL E
Sbjct: 129 RIKIVIEMGGARSIKWQPLNE 149
>sp|A8G763|NDHN_PROM2 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9215) GN=ndhN PE=3 SV=1
Length = 158
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++ +K +AI+ P EGGYE R L R+R G+ SARGLGDPE L K++ V P
Sbjct: 9 KFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRP 68
Query: 132 -----QPIARWYFPPEVDYRL----AALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLR 182
Q + R EV + + K ++W++E +VLS+SEL+ L + T
Sbjct: 69 PHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTND 128
Query: 183 PKVRVIAECGNWRKFMWKPL 202
K+ ++ E G RK WKPL
Sbjct: 129 NKLTIVVEMGGSRKLEWKPL 148
>sp|A2BTD8|NDHN_PROMS NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain AS9601) GN=ndhN PE=3 SV=1
Length = 158
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++ +K +AI+ P EGGYE R L R+R G+ SARGLGDPE L K++ V P
Sbjct: 9 KFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRP 68
Query: 132 -----QPIARWYFPPEVDYRL----AALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLR 182
Q + R EV + + K ++W++E +VLS+SEL+ L + T
Sbjct: 69 PHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTND 128
Query: 183 PKVRVIAECGNWRKFMWKPL 202
K+ ++ E G RK WKPL
Sbjct: 129 NKLTIVVEMGGSRKLEWKPL 148
>sp|Q318I3|NDHN_PROM9 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9312) GN=ndhN PE=3 SV=1
Length = 158
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++ +K +AI+ P EGGYE R L R+R G+ SARGLGDPE L K++ V P
Sbjct: 9 QFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRP 68
Query: 132 -----QPIARWYFPPEVDYRL----AALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLR 182
Q + R EV + + K ++W++E +VLS+SEL+ L + T
Sbjct: 69 PHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTND 128
Query: 183 PKVRVIAECGNWRKFMWKPL 202
K+ ++ E G RK WKPL
Sbjct: 129 NKLSIVVEMGGSRKLEWKPL 148
>sp|Q7UZU6|NDHN_PROMP NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
subsp. pastoris (strain CCMP1986 / MED4) GN=ndhN PE=3
SV=1
Length = 156
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 9/142 (6%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D+ K+K +A++ P EGGYE R L R+R G+ SARGLGDPE L K++ + P
Sbjct: 9 KFHNDLNKNKCLAMFAPLEGGYETRLLRRMRAKGFKTYITSARGLGDPEVFLLKLHGIRP 68
Query: 132 -----QPIARWYFPPEVDYRL----AALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLR 182
Q I R EV + + K ++W++E +VLS+SEL+ L + T
Sbjct: 69 PHLGHQSIGRNGALGEVQQVIPQASELFNENDKDKLLWLLEGQVLSQSELESLIKICTSD 128
Query: 183 PKVRVIAECGNWRKFMWKPLKE 204
K++++ E G RK WK L +
Sbjct: 129 NKLKIVVEMGGSRKLEWKSLND 150
>sp|Q46IQ8|NDHN_PROMT NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain NATL2A) GN=ndhN PE=3 SV=1
Length = 154
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 8/141 (5%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D+E +AI +P EGG E R L RLR GY SARGLGDP LT+++ + P
Sbjct: 9 KFRTDLESFGCLAILSPLEGGAETRLLRRLRASGYQTQVTSARGLGDPVVFLTQLHGIRP 68
Query: 132 -----QPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRP 183
Q + R EV +L L K LV+W++E +VLSKSEL + L P
Sbjct: 69 PHLGHQNVGRNGALGEVQQVIPQLNELLVEDKPLVLWLLEGQVLSKSELLAINNLCQKEP 128
Query: 184 KVRVIAECGNWRKFMWKPLKE 204
+++++ E G R W+PL E
Sbjct: 129 RIKIVIEMGGARSIKWQPLNE 149
>sp|Q0ID04|NDHN_SYNS3 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain CC9311) GN=ndhN PE=3 SV=1
Length = 153
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP---- 131
++E +A++ P EGG E R L RLR GY SARGLGDPE L + + + P
Sbjct: 13 ELESAGCMAVFAPLEGGAETRLLRRLRGAGYRTQLSSARGLGDPEVFLFQKHGIRPPHLG 72
Query: 132 -QPIARWYFPPEVDYRLAALPPSAKG---LVVWIIEAKVLSKSELQFLALLPTLRPKVRV 187
Q + R EV + L S G +V+W++E +VLS+SEL L L P+++V
Sbjct: 73 HQSVGRGAAVGEVQEVMPLLGESMLGTKPVVLWLLEGQVLSRSELSALCDLCRREPRLKV 132
Query: 188 IAECGNWRKFMWKPLKEI 205
+ E G R W+PLKE+
Sbjct: 133 VVEMGGARSLRWQPLKEL 150
>sp|Q3AUW5|NDHN_SYNS9 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain CC9902) GN=ndhN PE=3 SV=1
Length = 157
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP---- 131
D+E + +A++ P EGG E R L RLR GY SARGLGDPE LT+ + + P
Sbjct: 17 DLEANGCLAVHAPLEGGAETRLLRRLRGAGYRTRMTSARGLGDPEVFLTQKHGIRPPHLG 76
Query: 132 -QPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRV 187
+ R EV + L + +WI+E +VLS+SEL L L P++R+
Sbjct: 77 HNCVGRGAAVGEVQQVVPLIGDLLDGDDSVALWILEGQVLSRSELLSLCDLCKREPRLRI 136
Query: 188 IAECGNWRKFMWKPLKEIAG 207
I E G R W+P+K + G
Sbjct: 137 IVEMGGARSLRWQPMKALLG 156
>sp|A3PF48|NDHN_PROM0 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9301) GN=ndhN PE=3 SV=1
Length = 158
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 77/140 (55%), Gaps = 9/140 (6%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++ +K +AI+ P EGGYE R L R+R G+ SARGLGDPE L K++ V P
Sbjct: 9 KFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRP 68
Query: 132 -----QPIARWYFPPEVDYRL----AALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLR 182
Q + R EV + + K ++W++E +VLS+SEL+ L + T
Sbjct: 69 PHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTKD 128
Query: 183 PKVRVIAECGNWRKFMWKPL 202
K+ ++ E G RK WK L
Sbjct: 129 NKLTIVVEMGGSRKLEWKSL 148
>sp|Q3AMM9|NDHN_SYNSC NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain CC9605) GN=ndhN PE=3 SV=1
Length = 153
Score = 84.3 bits (207), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP---- 131
D+E + +A+ P EGG E R L RLR GY SARGLGDPE LT+ + + P
Sbjct: 13 DLEANGCLAVQAPLEGGAETRLLRRLRGAGYSTRMTSARGLGDPEVFLTQKHGIRPPHLG 72
Query: 132 -QPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRV 187
Q + R EV +L L S + +W++E +VLS+SEL L L P++R+
Sbjct: 73 HQSVGRGAAVGEVQEVAPQLGDLFESDAPVALWLLEGQVLSRSELLSLCDLCKREPRLRI 132
Query: 188 IAECGNWRKFMWKPL 202
I E G R W+P+
Sbjct: 133 IVEMGGARSLKWEPM 147
>sp|A5GVV9|NDHN_SYNR3 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain RCC307) GN=ndhN PE=3 SV=1
Length = 153
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP---- 131
D+E+ +A+A+Y P EGG E R L RLR GY SARGLGDPE L ++ V P
Sbjct: 13 DLERERALAVYAPLEGGAETRLLRRLRAAGYRTELTSARGLGDPEAFLLGLHGVRPPHLG 72
Query: 132 -QPIARWYFPPEVDYRLAALPP---SAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRV 187
+ R EV + L P S +V+W++E +VLS +E L L P++ +
Sbjct: 73 HHCVGRDAAVGEVQLVMPQLGPALASGAPVVLWMLEGQVLSSAEQASLLALCEREPRLHM 132
Query: 188 IAECGNWRKFMWKPLK 203
+ E G R WKPL+
Sbjct: 133 VLELGGSRSLRWKPLR 148
>sp|Q7V543|NDHN_PROMM NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9313) GN=ndhN PE=3 SV=1
Length = 153
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 8/140 (5%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP---- 131
D++ +A++ P EGG E R L RLR GY SARGLGDPE L +++ + P
Sbjct: 13 DLDACGCLAMHVPLEGGSETRLLRRLRAAGYRTQLSSARGLGDPEVFLFELHGIRPPHLG 72
Query: 132 -QPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRV 187
Q + R EV +LA L +V+W++E +VLS+SEL L L ++RV
Sbjct: 73 HQSVGRNGAVGEVQQVMPQLAELFVDNAPVVLWLLEGQVLSRSELLALCDLCKRESRLRV 132
Query: 188 IAECGNWRKFMWKPLKEIAG 207
+ E G R W+P+ + G
Sbjct: 133 VVEMGGARSLNWQPMSTLLG 152
>sp|A2CC26|NDHN_PROM3 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9303) GN=ndhN PE=3 SV=1
Length = 153
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 8/141 (5%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP---- 131
D++ +A++ P EGG E R L RLR GY SARGLGDPE L +++ + P
Sbjct: 13 DLDACGCLAMHVPLEGGSETRLLRRLRAAGYRTQLSSARGLGDPEVFLFQLHGIRPPHLG 72
Query: 132 -QPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRV 187
Q + R EV +LA L +V+W++E +VLS+SEL L L ++RV
Sbjct: 73 HQSVGRNGAVGEVQQVMPQLAELFVDNVPVVLWLLEGQVLSRSELLALCDLCKRESRLRV 132
Query: 188 IAECGNWRKFMWKPLKEIAGL 208
+ E G R W+P+ + G+
Sbjct: 133 VVEMGGARSLNWQPMSTLLGV 153
>sp|A9BCP8|NDHN_PROM4 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9211) GN=ndhN PE=3 SV=1
Length = 153
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
Query: 75 SDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP--- 131
D+E +AI TP EGG E R L RL+ GY S RG GDPE L K++ + P
Sbjct: 12 DDLESACCLAIQTPLEGGAETRLLRRLKAAGYRTQITSVRGFGDPEVFLLKLHGIRPPHL 71
Query: 132 --QPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVR 186
Q I R EV +L L + L +W++E +VLS+SEL L L P+++
Sbjct: 72 GHQNIGRNGALGEVQEVIPQLHELLSEEQPLALWLLEGQVLSRSELLALCDLSEKDPQLK 131
Query: 187 VIAECGNWRKFMWKPLKEI 205
++ E G RK W+ +++
Sbjct: 132 IVVEMGGERKLKWQSMRKF 150
>sp|B1X509|NDHN_PAUCH NAD(P)H-quinone oxidoreductase subunit N, organellar chromatophore
OS=Paulinella chromatophora GN=ndhN PE=3 SV=1
Length = 158
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPQPIA 135
D+E+ A+A++ P EGG E R + RLR +GY SA+GLGDPE L K++ +
Sbjct: 13 DLERDGALALFVPLEGGAETRLMRRLRAVGYKAYLTSAKGLGDPEAYLLKLHEQHVPHLG 72
Query: 136 RWY------------FPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRP 183
R P+V L L +++W++E +VLS SEL ++ LP P
Sbjct: 73 RRMSTEGKPEGKSVGHVPKVMPMLGPLLEGKSPILLWLLEGQVLSSSELSAISNLPKREP 132
Query: 184 KVRVIAECGNWRKFMWKPLKEIA 206
+++++ E G R W+ L ++
Sbjct: 133 RLKIVVEMGGARALRWESLGKLV 155
>sp|A5GIU6|NDHN_SYNPW NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain WH7803) GN=ndhN PE=3 SV=1
Length = 153
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 8/138 (5%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP---- 131
++E +A++ P EGG E R L RLR GY SARGLGDPE L + + V P
Sbjct: 13 ELESAGCMAVHAPLEGGAETRLLRRLRAAGYRTHLTSARGLGDPEVFLFQKHGVRPPHLG 72
Query: 132 -QPIARWYFPPEVDYRLAALPPSAKG---LVVWIIEAKVLSKSELQFLALLPTLRPKVRV 187
Q + R EV + L G +V+W++E +VLS+SEL L L P++++
Sbjct: 73 HQSVGRGAAVGEVHDVMPLLGEVFLGDKPVVLWLLEGQVLSRSELLSLCDLCRREPRLKI 132
Query: 188 IAECGNWRKFMWKPLKEI 205
+ E G R W+P+ ++
Sbjct: 133 VVEMGGARSLRWQPMTQL 150
>sp|Q7V9W1|NDHN_PROMA NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain SARG / CCMP1375 / SS120) GN=ndhN PE=3 SV=1
Length = 152
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ D+E +AI P EGG E R L RL+ GY S RGLGDPE L K++ + P
Sbjct: 9 KFRHDLEASGCLAINVPLEGGAETRLLRRLKAAGYKTQITSVRGLGDPEAFLLKLHGIRP 68
Query: 132 -----QPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRP 183
Q + R EV ++ L K +V+W++E +VLS+SE+ L L P
Sbjct: 69 PHLGHQNVGRNGALGEVQQVIPQVNELLAGEKSVVLWLLEGQVLSRSEILSLCDLCDKEP 128
Query: 184 KVRVIAECGNWRKFMWKPLK 203
+++++ E G R W+ ++
Sbjct: 129 RLKIVIEMGGARALRWQSMR 148
>sp|P27909|POLG_DEN1B Genome polyprotein OS=Dengue virus type 1 (strain Brazil/97-11/1997)
PE=1 SV=2
Length = 3392
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 16 KIQQKQQPTRNWMMMQGLRRRNGKASKRVGVTNCSGNSGIEI---------GDFIGGDLL 66
K+ + Q+P +N +M + RR+ + S +VG + + +E+ G F +L
Sbjct: 3068 KVVRVQRPAKNGTVMDVISRRDQRGSGQVGTYGLNTFTNMEVQLIRQMESEGIFFPSELE 3127
Query: 67 KPDLGRWLSD-VEKHKA 82
P+L + D +EKH A
Sbjct: 3128 SPNLAERVLDWLEKHGA 3144
>sp|Q929A9|ADDA_LISIN ATP-dependent helicase/nuclease subunit A OS=Listeria innocua serovar
6a (strain CLIP 11262) GN=addA PE=3 SV=1
Length = 1235
Score = 30.8 bits (68), Expect = 6.4, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 60 FIGGDLLKPDLGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGL 116
F+ DL K W+ +V+ HK + + +P++ E R++ Y + D A G+
Sbjct: 960 FLTDDLEKEKSDNWMENVKAHKQVPVKSPYKDEIE-------RFMHYQYKDEEATGI 1009
>sp|Q8SS49|RL22_ENCCU 60S ribosomal protein L22 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL22 PE=1 SV=1
Length = 112
Score = 30.4 bits (67), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 28 MMMQGLRRRNGKASKRVGVTNCSGNSGIEI---GDFIGGDLLKPDLGRWLSDVEKHKAIA 84
+ Q ++ GK K + + N +GN +E+ G FIG LK +GR+L + I
Sbjct: 33 FLQQKIKCYTGKKEKLLHI-NANGNI-VEVDVTGGFIGKQGLKWQIGRFLHMKKLRAFIK 90
Query: 85 IYTPHEGGYEGRYLN 99
I+ G+E RY+N
Sbjct: 91 IFAQGLDGFELRYIN 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,719,057
Number of Sequences: 539616
Number of extensions: 3669284
Number of successful extensions: 6391
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6317
Number of HSP's gapped (non-prelim): 41
length of query: 214
length of database: 191,569,459
effective HSP length: 113
effective length of query: 101
effective length of database: 130,592,851
effective search space: 13189877951
effective search space used: 13189877951
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)