Query 028058
Match_columns 214
No_of_seqs 104 out of 188
Neff 3.3
Searched_HMMs 29240
Date Mon Mar 25 08:41:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028058.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028058hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pm3_A MTH1895; unknown functi 99.7 3E-18 1E-22 129.7 7.8 78 106-184 10-95 (97)
2 3htr_A Uncharacterized PRC-bar 99.2 3.1E-11 1.1E-15 93.9 6.4 75 109-185 7-87 (120)
3 1eys_H Photosynthetic reaction 96.5 0.0051 1.7E-07 54.4 6.7 61 120-182 149-211 (259)
4 1rzh_H Reaction center protein 95.9 0.017 5.7E-07 51.3 6.9 60 119-182 145-205 (260)
5 2wjn_H Reaction center protein 95.7 0.013 4.6E-07 51.8 5.7 60 120-182 150-210 (258)
6 2qgg_A 16S rRNA-processing pro 63.8 25 0.00084 28.5 7.4 67 117-185 104-179 (182)
7 3h9n_A Ribosome maturation fac 63.8 48 0.0016 26.6 9.1 70 117-188 95-171 (177)
8 2dgy_A MGC11102 protein; EIF-1 44.0 54 0.0018 25.2 5.9 55 125-187 7-67 (111)
9 2dyi_A Probable 16S rRNA-proce 37.9 53 0.0018 26.0 5.3 51 117-170 89-140 (162)
10 2f1l_A 16S rRNA processing pro 31.4 1.4E+02 0.0049 24.2 7.0 53 117-171 113-165 (187)
11 1d7q_A Translation initiation 27.9 90 0.0031 25.2 5.1 36 125-160 23-64 (143)
12 2lyx_A Uncharacterized protein 24.1 76 0.0026 23.7 3.7 28 130-157 56-83 (87)
13 1hy9_A Cocaine and amphetamine 24.1 33 0.0011 22.8 1.5 18 5-22 19-36 (41)
No 1
>1pm3_A MTH1895; unknown function, structural genomics, PSI, protein structure initiative; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.41.1.2
Probab=99.74 E-value=3e-18 Score=129.72 Aligned_cols=78 Identities=21% Similarity=0.209 Sum_probs=58.2
Q ss_pred cccccccccceeEe-ccccCceeEeccCcceeeeeeeEEEECCCCEEEEEEECCC----CCCC-C-CeEEeccccceec-
Q 028058 106 EKVKLRRGRQVMRR-SNLLAKQVISIQSAMSLGFVSQLWVDTTSWVVLVVEVRPN----LLSG-E-PERLLLEDICQVG- 177 (214)
Q Consensus 106 ~~~~~~~~~qmmr~-SeL~~KEVINi~dG~RLG~V~DL~VD~~sG~V~AIiVp~~----~f~g-e-~~~IPWe~IkKIG- 177 (214)
-+.|+.+...||++ |+|.+|+||| .+|++||.|.|+++|+++|+|.+++++.+ +|+. + ...|||++|++||
T Consensus 10 ~~~~~~~~~~~Mr~~seL~Gk~Vin-~dG~~LG~V~Dv~iD~~~G~I~~lvl~~~~~~~~~g~~~~~~~IPw~~V~~IG~ 88 (97)
T 1pm3_A 10 HSSGLVPRGSHMRIVEEMVGKEVLD-SSAKVIGKVKDVEVDIESQAIESLVLGKGGISEGLGLSKGETIVPYEMVKKIGD 88 (97)
T ss_dssp ----------CEETTTTSSSCEEEC-TTSCEEEEEEEEEEETTTTEEEEEEEECCC---------CEEEEEGGGEEEESS
T ss_pred ccCCCCCCCeEEEeehhCCCCEeEC-CCCCEEeEEEEEEEECCCCEEEEEEEcCCCeeccccCCCeeEEEEhhHheEECC
Confidence 35677888899999 9999999999 99999999999999999999999999875 3553 3 3579999999999
Q ss_pred cEEEEec
Q 028058 178 DVVLIED 184 (214)
Q Consensus 178 DVILVe~ 184 (214)
|+||++.
T Consensus 89 dvIi~~~ 95 (97)
T 1pm3_A 89 KILLKGP 95 (97)
T ss_dssp SEEECCT
T ss_pred EEEEEec
Confidence 8777654
No 2
>3htr_A Uncharacterized PRC-barrel domain protein; beta-barrel, photo-reaction-center domain, structural genomics, PSI-2; HET: MSE; 2.06A {Rhodopseudomonas palustris}
Probab=99.18 E-value=3.1e-11 Score=93.92 Aligned_cols=75 Identities=9% Similarity=0.080 Sum_probs=62.3
Q ss_pred ccccccceeEeccccCceeEeccCcceeeeeeeEEEECCCCEEEEEEECC-CCCC-CCC-eEEeccccceec---cEEEE
Q 028058 109 KLRRGRQVMRRSNLLAKQVISIQSAMSLGFVSQLWVDTTSWVVLVVEVRP-NLLS-GEP-ERLLLEDICQVG---DVVLI 182 (214)
Q Consensus 109 ~~~~~~qmmr~SeL~~KEVINi~dG~RLG~V~DL~VD~~sG~V~AIiVp~-~~f~-ge~-~~IPWe~IkKIG---DVILV 182 (214)
..+....||+.|+|.+++|+|. +|++||.|.|++||..+|+|.+++|+. +||+ ++. ..|||.+|+ +. +.+.|
T Consensus 7 ~~~~~~~l~~~~~l~G~~V~~~-dG~~iG~V~dv~iD~~~G~i~~~vv~~GgflG~g~~~v~ip~~~l~-~~~~~~~~~v 84 (120)
T 3htr_A 7 ETNETLKLIGSDKVQGTAVYGP-DGEKIGSIERVMIEKVSGRVSYAVLSFGGFLGIGDDHYPLPWPALK-YNVELGGYQV 84 (120)
T ss_dssp CCCBCSSEEEHHHHTTCEEECT-TSCEEEEEEEEEEETTTCBEEEEEEEESSBTTBSCEEEEECGGGCE-EETTTTEEEC
T ss_pred cccCCcceEehhhccCCEEEcC-CCCEEEEEEEEEEECCCCcEEEEEEECCCccCcCCEEEEeCHHHeE-EecCCCEEEe
Confidence 3466778999999999999999 999999999999999999999999985 5886 444 469999995 53 56666
Q ss_pred ecC
Q 028058 183 EDE 185 (214)
Q Consensus 183 e~~ 185 (214)
+..
T Consensus 85 ~~t 87 (120)
T 3htr_A 85 MVT 87 (120)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 3
>1eys_H Photosynthetic reaction center; membrane protein complex, electron transport; HET: BGL BCL BPH MQ8 HEM CRT LDA PEF; 2.20A {Thermochromatium tepidum} SCOP: b.41.1.1 f.23.10.1
Probab=96.48 E-value=0.0051 Score=54.36 Aligned_cols=61 Identities=18% Similarity=0.219 Sum_probs=46.8
Q ss_pred ccccCceeEeccCcceeeeeeeEEEECCCCEEEEEEECCCCCCCCCeEEe--ccccceeccEEEE
Q 028058 120 SNLLAKQVISIQSAMSLGFVSQLWVDTTSWVVLVVEVRPNLLSGEPERLL--LEDICQVGDVVLI 182 (214)
Q Consensus 120 SeL~~KEVINi~dG~RLG~V~DL~VD~~sG~V~AIiVp~~~f~ge~~~IP--We~IkKIGDVILV 182 (214)
++|.+..|.+. ||+++|.|.|++||..+|+|.-++|--+ |+++...|| |..|..-.+-|-|
T Consensus 149 ~dl~G~~Vya~-DGekIG~V~Dv~vD~~sG~VrYlVVdtG-~ggkkVLiPi~~~~Id~d~~~V~V 211 (259)
T 1eys_H 149 PDPRGMTVVGL-DGEVAGTVSDVWVDRSEPQIRYLEVEVA-ANKKKVLLPIGFSRFDKKARKVKV 211 (259)
T ss_dssp CCCTTCEEECS-SSCEEEEEEEEEEETTTTEEEEEEEEET-TTCCEEEEEGGGCEEEGGGTEEEC
T ss_pred CCCcCCEEEeC-CCCeeEEEEEEEEECCCCeEEEEEEEcC-CCCCcEEEecChhhccccCCEEEE
Confidence 56888999988 9999999999999999999999999877 545544445 4444442245666
No 4
>1rzh_H Reaction center protein H chain; bacterial photosynthesis, proton TR pathway, revertant, integral membrane protein, photosynthes; HET: BCL BPH U10 HTO SPO LDA CDL; 1.80A {Rhodobacter sphaeroides} SCOP: b.41.1.1 f.23.10.1 PDB: 1e14_H* 1f6n_H* 1fnp_H* 1fnq_H* 1jgw_H* 1jgx_H* 1jgy_H* 1jgz_H* 1jh0_H* 1k6l_H* 1k6n_H* 1kby_H* 1l9b_H* 1l9j_H* 1m3x_H* 1mps_H* 1pcr_H* 1e6d_H* 1rg5_H* 1rgn_H* ...
Probab=95.89 E-value=0.017 Score=51.29 Aligned_cols=60 Identities=22% Similarity=0.295 Sum_probs=47.9
Q ss_pred eccccCceeEeccCcceeeeeeeEEEECCCCEEEEEEECCCCCCCCCeEEeccccceec-cEEEE
Q 028058 119 RSNLLAKQVISIQSAMSLGFVSQLWVDTTSWVVLVVEVRPNLLSGEPERLLLEDICQVG-DVVLI 182 (214)
Q Consensus 119 ~SeL~~KEVINi~dG~RLG~V~DL~VD~~sG~V~AIiVp~~~f~ge~~~IPWe~IkKIG-DVILV 182 (214)
-.++++..|... ||+++|.|.|+|||..+|+|.-++|--+ ++++.-|||.-. +|- +-|-|
T Consensus 145 ~~d~~G~~Vyg~-DGe~iGsV~Dl~VD~~eg~VRYLVVdtG--ggrkVLLP~~~~-riD~~~VyV 205 (260)
T 1rzh_H 145 GKNPIGLPVRGC-DLEIAGKVVDIWVDIPEQMARFLEVELK--DGSTRLLPMQMV-KVQSNRVHV 205 (260)
T ss_dssp SCCCTTCEEEET-TSCEEEEEEEEEEETTTTEEEEEEEECT--TSCEEEEEGGGC-EECSSCEEE
T ss_pred CCCCCCCEeEcC-CCCeeEEEEEEEEECCCCEEEEEEEEeC--CCCEEEeeeEEE-EEcCCeEEE
Confidence 356789999998 9999999999999999999999999765 344455899754 334 66666
No 5
>2wjn_H Reaction center protein H chain; bacteriochlorophyll, lipidic-sponge phase, photosynthesis, R center, electron transport, cell membrane; HET: HEM FME BCB BPB MPG MQ7 NS5; 1.86A {Rhodopseudomonas viridis} PDB: 1prc_H* 1r2c_H* 1vrn_H* 1dxr_H* 2jbl_H* 2prc_H* 2i5n_H* 2wjm_H* 2x5u_H* 2x5v_H* 3d38_H* 3prc_H* 3t6e_H* 4ac5_H* 5prc_H* 6prc_H* 7prc_H* 3t6d_H* 3g7f_H*
Probab=95.73 E-value=0.013 Score=51.80 Aligned_cols=60 Identities=20% Similarity=0.279 Sum_probs=47.0
Q ss_pred ccccCceeEeccCcceeeeeeeEEEECCCCEEEEEEECCCCCCCCCeEEeccccceec-cEEEE
Q 028058 120 SNLLAKQVISIQSAMSLGFVSQLWVDTTSWVVLVVEVRPNLLSGEPERLLLEDICQVG-DVVLI 182 (214)
Q Consensus 120 SeL~~KEVINi~dG~RLG~V~DL~VD~~sG~V~AIiVp~~~f~ge~~~IPWe~IkKIG-DVILV 182 (214)
.|+++..|... ||+++|.|.|+|||..+|+|.-++|--+. ++++.-|||.-. +|- +-|-|
T Consensus 150 ~D~~G~~Vyg~-DGe~iGsV~Dl~VD~~eg~VRYLVVdtGg-ggrkVLLP~~~~-riD~~~VyV 210 (258)
T 2wjn_H 150 VDPRGLPVVAA-DGVEAGTVTDLWVDRSEHYFRYLELSVAG-SARTALIPLGFC-DVKKDKIVV 210 (258)
T ss_dssp CCCTTCEEECT-TSCEEEEEEEEEEETTTTEEEEEEEEETT-TTEEEEEEGGGC-EECSSCEEC
T ss_pred CCCCCCEeEcC-CCCeeEEEEEEEEECCCCEEEEEEEEcCC-CCCEEEeeeEEE-EEcCCeEEE
Confidence 46789999988 99999999999999999999999996543 344445899754 334 55666
No 6
>2qgg_A 16S rRNA-processing protein RIMM; X-RAY, NESG, ASR73, structural genomics, PSI-2, protein structure initiative; 2.40A {Acinetobacter calcoaceticus}
Probab=63.81 E-value=25 Score=28.47 Aligned_cols=67 Identities=21% Similarity=0.302 Sum_probs=44.7
Q ss_pred eEeccccCceeEecc---CcceeeeeeeEEEECCCCEEEEEEECCCCCCC-CCeEEecc-c-cceec---cEEEEecC
Q 028058 117 MRRSNLLAKQVISIQ---SAMSLGFVSQLWVDTTSWVVLVVEVRPNLLSG-EPERLLLE-D-ICQVG---DVVLIEDE 185 (214)
Q Consensus 117 mr~SeL~~KEVINi~---dG~RLG~V~DL~VD~~sG~V~AIiVp~~~f~g-e~~~IPWe-~-IkKIG---DVILVe~~ 185 (214)
.-..||.+-+|++.. +|..||.|.++ +++-.+.|..|.-...- .+ ++..||++ + |.+|= -.|.|+..
T Consensus 104 ~Y~~dLiGl~V~~~~~~~~g~~lG~V~~v-~~~gandvl~V~~~~~~-~g~ke~LIPf~~~~V~~VDl~~~~I~v~~p 179 (182)
T 2qgg_A 104 YYWSDLKGLTVLGLDDEEQEVNLGQIHEL-FETGANDVMVVRATPDS-IDSEERMIPWHKDVVQRVDLEAGRIYVNWG 179 (182)
T ss_dssp CCHHHHTTCEEEEECTTSCEEEEEEEEEE-EECSSCEEEEEECCSSS-SSSCCEEEECCTTTEEEEETTTTEEEESCC
T ss_pred EeHHHhCCcEEEEcccCCCCcEEEEEEEE-ccCCCcEEEEEEeccCC-CCCeEEEeecChhhEeEEECCCCEEEEeCC
Confidence 567899999999974 78999999998 47667777766531110 13 44569993 2 44543 35666544
No 7
>3h9n_A Ribosome maturation factor RIMM; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Haemophilus influenzae}
Probab=63.79 E-value=48 Score=26.60 Aligned_cols=70 Identities=16% Similarity=0.281 Sum_probs=48.4
Q ss_pred eEeccccCceeEeccCcceeeeeeeEEEECCCCEEEEEEECCC-CCCCCCeEEecc--c-cceec---cEEEEecCCcc
Q 028058 117 MRRSNLLAKQVISIQSAMSLGFVSQLWVDTTSWVVLVVEVRPN-LLSGEPERLLLE--D-ICQVG---DVVLIEDESVM 188 (214)
Q Consensus 117 mr~SeL~~KEVINi~dG~RLG~V~DL~VD~~sG~V~AIiVp~~-~f~ge~~~IPWe--~-IkKIG---DVILVe~~~~~ 188 (214)
.-..||.+-+|+|. +|..||.|.++ +++-.+.|..|.-+.. -+++++..||+- + |.+|= -.|.|+.++..
T Consensus 95 ~Y~~dLiGl~V~~~-~g~~lG~V~~v-~~~gandvl~V~~~~~~~~~~~e~LIP~v~~~~V~~VDl~~~~I~v~~p~gl 171 (177)
T 3h9n_A 95 YYWHDLIGCTVVNL-EGYTMGTVTEM-METGSNDVLVVKANTKDAFGKQERLIPFLYEQVVKRVDLTTKTIEVDWDAGF 171 (177)
T ss_dssp GGGGGTTTCEEEET-TCCEEEEEEEE-EESSSCEEEEEECCTTCTTCCSEEEEECCBTTTEEEEEGGGTEEEECCCSST
T ss_pred CCHHHhcCCEEEeC-CCCEEEEEEEE-eeCCCcEEEEEEeccccCCCCcEEEeeccchheEEEEeCCCCEEEEECCcch
Confidence 66889999999996 68999999998 5777777777765421 223344569993 3 34443 46777766543
No 8
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.96 E-value=54 Score=25.19 Aligned_cols=55 Identities=13% Similarity=0.107 Sum_probs=38.6
Q ss_pred ceeEeccCcceeeeeee------EEEECCCCEEEEEEECCCCCCCCCeEEeccccceeccEEEEecCCc
Q 028058 125 KQVISIQSAMSLGFVSQ------LWVDTTSWVVLVVEVRPNLLSGEPERLLLEDICQVGDVVLIEDESV 187 (214)
Q Consensus 125 KEVINi~dG~RLG~V~D------L~VD~~sG~V~AIiVp~~~f~ge~~~IPWe~IkKIGDVILVe~~~~ 187 (214)
++++....|.-+|.|.+ +.|-+..|...-.-+|++| ++..+| +.||.|+|+..+.
T Consensus 7 ~e~~~p~ege~~g~V~~~lgn~~f~V~l~nG~~~la~i~GK~--Rk~IwI------~~GD~VlVe~~~y 67 (111)
T 2dgy_A 7 GEHIVPSNQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKY--RKNIWI------KRGDFLIVDPIEE 67 (111)
T ss_dssp CSSCCCCSSCEEEEEEECCSSSEEEEECTTSCEEEEECCTTC--CSCCCC------CSSCEEEEEECSS
T ss_pred ccccCCCCCeEEEEEEEeCCCCEEEEEeCCCCEEEEEechhh--cccEEE------cCCCEEEEEeccc
Confidence 45666778888898866 6677777877777788876 222222 3489999998764
No 9
>2dyi_A Probable 16S rRNA-processing protein RIMM; ribosomal protein S19, PRC-barrel, STRU genomics, NPPSFA; 2.00A {Thermus thermophilus} PDB: 3a1p_A 2dog_A
Probab=37.90 E-value=53 Score=26.04 Aligned_cols=51 Identities=16% Similarity=0.083 Sum_probs=36.1
Q ss_pred eEeccccCceeEeccCcceeeeeeeEEEECCCCEEEEEEECCCC-CCCCCeEEec
Q 028058 117 MRRSNLLAKQVISIQSAMSLGFVSQLWVDTTSWVVLVVEVRPNL-LSGEPERLLL 170 (214)
Q Consensus 117 mr~SeL~~KEVINi~dG~RLG~V~DL~VD~~sG~V~AIiVp~~~-f~ge~~~IPW 170 (214)
.-..||.+-+|+ .+|..||.|.++. ++-.+.|..|.-+++- ...++.-||+
T Consensus 89 ~y~~dLiGl~V~--~~g~~lG~V~~v~-~~ga~dvl~V~~~~g~~~~~~e~LIPf 140 (162)
T 2dyi_A 89 YYYFALIGLPVY--VEGRQVGEVVDIL-DAGAQDVLIIRGVGERLRDRAERLVPL 140 (162)
T ss_dssp CCHHHHTTCEEE--ETTEEEEEEEEEE-EETTEEEEEEEECCSSGGGSTTEEEET
T ss_pred EeHHHhCCeEEE--ECCeEEEEEEEEc-cCCCceEEEEEeCCCCcCcCcEEEEec
Confidence 567899999999 7899999999984 6666777776654320 0003455887
No 10
>2f1l_A 16S rRNA processing protein; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS unknown function; HET: UNL; 2.46A {Pseudomonas aeruginosa} SCOP: b.41.1.4 b.43.3.4
Probab=31.40 E-value=1.4e+02 Score=24.18 Aligned_cols=53 Identities=23% Similarity=0.214 Sum_probs=36.1
Q ss_pred eEeccccCceeEeccCcceeeeeeeEEEECCCCEEEEEEECCCCCCCCCeEEecc
Q 028058 117 MRRSNLLAKQVISIQSAMSLGFVSQLWVDTTSWVVLVVEVRPNLLSGEPERLLLE 171 (214)
Q Consensus 117 mr~SeL~~KEVINi~dG~RLG~V~DL~VD~~sG~V~AIiVp~~~f~ge~~~IPWe 171 (214)
.-..||.+-+|++. +|..||.|.++ +++-.+.|..|.-+++--..++..||+-
T Consensus 113 fY~~DLIGl~V~~~-~g~~lG~V~~v-~~~ganDvlvV~~~~g~~~~ke~LIPfv 165 (187)
T 2f1l_A 113 YYWHQLEGLKVIDQ-GRQLLGVIDHL-LETGANDVMVVKPCAGSLDDRERLLPYT 165 (187)
T ss_dssp CCHHHHTTCEEEET-TSCEEEEEEEE-ECCSSSCEEEEECCTTSSSSCCEEEECS
T ss_pred EeHHHcCCeEEEeC-CCCEEEEEEEE-ccCCCcEEEEEEeCCCCCCCcEEEEech
Confidence 56789999999986 67889999998 4666677776654321000034468883
No 11
>1d7q_A Translation initiation factor 1A; OB-fold, beta-barrel, RNA-binding protein, gene regulation; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=27.92 E-value=90 Score=25.15 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=27.4
Q ss_pred ceeEeccCcceeeeeee------EEEECCCCEEEEEEECCCC
Q 028058 125 KQVISIQSAMSLGFVSQ------LWVDTTSWVVLVVEVRPNL 160 (214)
Q Consensus 125 KEVINi~dG~RLG~V~D------L~VD~~sG~V~AIiVp~~~ 160 (214)
.+++.-..|.-.|.|.+ +.|-+..|...---+|+.|
T Consensus 23 ~el~~p~ege~~g~V~e~lgn~~f~V~l~nG~~~La~I~GKm 64 (143)
T 1d7q_A 23 RELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKL 64 (143)
T ss_dssp CCCCCCCTTEEEEEEEEECSSSEEEEEETTTEEEEEECCSGG
T ss_pred hcccCCCCCEEEEEEEEEcCCCEEEEEeCCCCEEEEEecccc
Confidence 45666678999999976 5677778887777788875
No 12
>2lyx_A Uncharacterized protein YQZG; PF13028, DUF3889, structural genomics, unknown function; NMR {Bacillus subtilis subsp}
Probab=24.08 E-value=76 Score=23.74 Aligned_cols=28 Identities=14% Similarity=0.126 Sum_probs=25.3
Q ss_pred ccCcceeeeeeeEEEECCCCEEEEEEEC
Q 028058 130 IQSAMSLGFVSQLWVDTTSWVVLVVEVR 157 (214)
Q Consensus 130 i~dG~RLG~V~DL~VD~~sG~V~AIiVp 157 (214)
...|+..|+.-.+..++.|.+|.+|.+.
T Consensus 56 ~e~~kefgV~V~I~f~p~T~kv~sI~~~ 83 (87)
T 2lyx_A 56 REGSKEFGVFVTISFDPYSQKVNKIAIL 83 (87)
T ss_dssp EETTEEEEEEEEEEECTTTCCEEEEEEE
T ss_pred EeCCEEEEEEEEEEEECCCCeEEEEEEE
Confidence 3588999999999999999999999874
No 13
>1hy9_A Cocaine and amphetamine regulated transcript protein; cysteine knot, signaling protein; NMR {Homo sapiens} SCOP: g.3.17.1
Probab=24.06 E-value=33 Score=22.80 Aligned_cols=18 Identities=11% Similarity=0.427 Sum_probs=12.9
Q ss_pred eeeeeecccccCCccCCC
Q 028058 5 VRVSRMSECISSIPLSNS 22 (214)
Q Consensus 5 ~~~~~mc~c~~s~~~~~s 22 (214)
-|+-+||||...+.-.+.
T Consensus 19 ~RigklC~C~rg~~Cn~f 36 (41)
T 1hy9_A 19 ARIGKLCDCPRGTSCNSF 36 (41)
T ss_dssp SSEEECCBCCTTCCBCTT
T ss_pred cccchhcCCCCCCcchhh
Confidence 378899999986554333
Done!