BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028060
(214 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L467|BH104_ARATH Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104
PE=2 SV=1
Length = 283
Score = 253 bits (646), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 141/242 (58%), Positives = 167/242 (69%), Gaps = 37/242 (15%)
Query: 8 DFINYSFNDQN----------ASLDFSW--------PEQNGSAD-----------NDISS 38
DF++Y N Q + LD S PEQ G D N SS
Sbjct: 44 DFVSYGVNLQQEPDEVFSIGASQLDLSSYNGVLSLEPEQVGQQDCEVVQEEEVEINSGSS 103
Query: 39 TGVVPPENEN-----TRKRARSDSCSRPG-SKACREKLRRERLNDRFLDLSCILEPGRPA 92
G V E E+ +RKRAR+ SCSR G +KACRE+LRRE+LN+RF+DLS +LEPGR
Sbjct: 104 GGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTP 163
Query: 93 RTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKL 152
+TDKPAILDDAIR+LNQLR E+ +L+ETN+KL EEIKSLKAEKNELREEKL+LKADKEK
Sbjct: 164 KTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKT 223
Query: 153 EQQLKVMAMPTGGYMPTHPAAYHAGLNKMAVYPSYGLMPMWQYLPPSLHDTSRDHELRPP 212
EQQLK M P+ G++P PAA++ NKMAVYPSYG MPMW Y+P S+ DTSRD ELRPP
Sbjct: 224 EQQLKSMTAPSSGFIPHIPAAFNH--NKMAVYPSYGYMPMWHYMPQSVRDTSRDQELRPP 281
Query: 213 AA 214
AA
Sbjct: 282 AA 283
>sp|Q9LTC7|BH034_ARATH Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2
SV=1
Length = 320
Score = 227 bits (579), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/188 (63%), Positives = 146/188 (77%), Gaps = 9/188 (4%)
Query: 34 NDISSTGVVPPE--NENTRKRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRP 91
N SS G V E E + KR R+ SCS+PG+KACREKLRRE+LND+F+DLS +LEPGR
Sbjct: 135 NSSSSVGAVKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRT 194
Query: 92 ARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEK 151
+TDK AILDDAIRV+NQLR E+ EL+ETN+KL EEIKSLKA+KNELREEKL+LKA+KEK
Sbjct: 195 PKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEK 254
Query: 152 LEQQLKVMAMPTGGYMPT-HPAAYHAGLNKMAVYPSYGL----MPMWQYLPPSLHDTSRD 206
+EQQLK M +P+ G+MP+ HPAA+H+ +KMAV YG MPMW LPP+ DTSRD
Sbjct: 255 MEQQLKSMVVPSPGFMPSQHPAAFHS--HKMAVAYPYGYYPPNMPMWSPLPPADRDTSRD 312
Query: 207 HELRPPAA 214
+ PP A
Sbjct: 313 LKNLPPVA 320
>sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1
Length = 234
Score = 187 bits (476), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 131/207 (63%), Gaps = 15/207 (7%)
Query: 23 FSWPEQ-------NGSADNDISSTGVVPPENENTRKRARSDSCSRPGSKACREKLRRERL 75
FSWP Q N SA D S+ + ++KR R +S S SKACREK RR+RL
Sbjct: 28 FSWPVQQPIGVSSNSSAGVDGSAGNSEASKEPGSKKRGRCESSSATSSKACREKQRRDRL 87
Query: 76 NDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEIKSLKAEK 135
ND+F++L ILEPG P +TDK AIL DA+R++ QLR E+Q+LK++N LQ++IK LK EK
Sbjct: 88 NDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEK 147
Query: 136 NELREEKLILKADKEKLEQQLKVMAMPTGGYMPTHP--------AAYHAGLNKMAVYPSY 187
NELR+EK LK +KEKLEQQLK M P + P P A A NKM SY
Sbjct: 148 NELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISY 207
Query: 188 GLMPMWQYLPPSLHDTSRDHELRPPAA 214
+ MWQ++PP+ DTS+DH LRPP A
Sbjct: 208 PGVAMWQFMPPASVDTSQDHVLRPPVA 234
>sp|Q9C682|BH115_ARATH Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115
PE=2 SV=1
Length = 226
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 140/215 (65%), Gaps = 12/215 (5%)
Query: 9 FINYSFNDQNASLDFSWPEQNGSADNDISSTGVV----PPENENTRKRARSDSCSRPGSK 64
I +F+DQN + F W + +GSA + G + + ++RKR +++SC+ SK
Sbjct: 15 LIEGAFSDQNPT--FPW-QIDGSATVSVEVDGFLCDADVIKEPSSRKRIKTESCTGSNSK 71
Query: 65 ACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKL 124
ACREK RR+RLND+F +LS +LEPGR +TDK AI++DAIR++NQ R E+Q+LK+ N L
Sbjct: 72 ACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSL 131
Query: 125 QEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMAM---PTGGYMPTHPAAYHAGL--N 179
QE+IK LK EKNELR+EK LK +KE+++QQLK + P ++P A +
Sbjct: 132 QEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQPQPCFLPNPQTLSQAQAPGS 191
Query: 180 KMAVYPSYGLMPMWQYLPPSLHDTSRDHELRPPAA 214
K+ + +Y MWQ++PP+ DTS+DH LRPP A
Sbjct: 192 KLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 226
>sp|Q9LT23|BH121_ARATH Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121
PE=2 SV=1
Length = 337
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 73/116 (62%), Gaps = 6/116 (5%)
Query: 56 DSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQ 115
D +R KA REKLRRE+LN+ F++L +L+P RP + DK IL D +++L +L +E
Sbjct: 55 DVSARKSQKAGREKLRREKLNEHFVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVN 113
Query: 116 ELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKL----EQQLKVMAMPTGGYM 167
+LK L +E + L EKN+LREEK LK+D E L +Q+L+ M+ P G M
Sbjct: 114 KLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMS-PWGAAM 168
>sp|Q8W2F2|BH011_ARATH Transcription factor bHLH11 OS=Arabidopsis thaliana GN=BHLH11 PE=2
SV=2
Length = 286
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
Query: 58 CSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQEL 117
CS+ KA REKLRR++L ++FL+L L+P RP ++DK ++L D I++L + + L
Sbjct: 46 CSQ---KAEREKLRRDKLKEQFLELGNALDPNRP-KSDKASVLTDTIQMLKDVMNQVDRL 101
Query: 118 KETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQ 155
K E L +E + L EK+ELREEK LK+D E L Q
Sbjct: 102 KAEYETLSQESRELIQEKSELREEKATLKSDIEILNAQ 139
>sp|Q9SN74|BH047_ARATH Transcription factor bHLH47 OS=Arabidopsis thaliana GN=BHLH47 PE=2
SV=1
Length = 240
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 46 NENTRKRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIR 105
N +R R + +KA RE+L+RE LN+ F++L+ LE + + K +IL +A R
Sbjct: 14 NATADERCRKGKVPKRINKAVRERLKREHLNELFIELADTLELNQ-QNSGKASILCEATR 72
Query: 106 VLNQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMAMPTGG 165
L + + + L++ + L E + EKNEL+EE +L+ + KL+ +++ A +
Sbjct: 73 FLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSVLETEISKLQNEIEARANQSKP 132
Query: 166 YMPTHPA 172
+ T PA
Sbjct: 133 DLNTSPA 139
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 41 VVPPENENTRKRARSDSCSR--PGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPA 98
VV P + RKR R + R P + E+ RRE+LN RF L ++ ++ DK +
Sbjct: 391 VVEPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVP--NVSKMDKAS 448
Query: 99 ILDDAIRVLNQLRTESQELKETNEKLQEEIKSLKAEKN 136
+L DAI +N+L+++ Q+ + E++Q+++ + E N
Sbjct: 449 LLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGN 486
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 68/124 (54%), Gaps = 9/124 (7%)
Query: 41 VVPPENENTRKRARSDSCSR--PGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPA 98
VV PE + RKR R + R P + E+ RRE+LN RF L ++ ++ DK +
Sbjct: 393 VVEPEKK-PRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVP--NVSKMDKAS 449
Query: 99 ILDDAIRVLNQLRTESQELKETNEKLQEEIKSLKAE----KNELREEKLILKADKEKLEQ 154
+L DAI +++L+++ Q+ + E+LQ++I + E K+ +++ K + + +E
Sbjct: 450 LLGDAISYISELKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEM 509
Query: 155 QLKV 158
++ V
Sbjct: 510 EVDV 513
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 56 DSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQ 115
D+ G+ A EK RRE+LN+RF+ L I+ ++ DK +ILDD I L L+ Q
Sbjct: 398 DTPEETGNHALSEKKRREKLNERFMTLRSIIPS--ISKIDKVSILDDTIEYLQDLQKRVQ 455
Query: 116 ELKETNEKLQEE--IKSLKAEKNELREEK 142
EL+ E E I +K +K + EE+
Sbjct: 456 ELESCRESADTETRITMMKRKKPDDEEER 484
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 50 RKRARSDSCSR--PGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVL 107
+KR R + R P + E+ RRE+LN RF L ++ ++ DK ++L DAI +
Sbjct: 437 KKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAIAYI 494
Query: 108 NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADK 149
N+L+ S+ +K +EKLQ KN+L E KL L K
Sbjct: 495 NELK--SKVVKTESEKLQ--------IKNQLEEVKLELAGRK 526
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 62 GSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETN 121
G+ A EK RRE+LN+RF+ L I+ + DK +ILDD I L +L QEL+
Sbjct: 440 GNHAVLEKKRREKLNERFMTLRKIIPS--INKIDKVSILDDTIEYLQELERRVQELESCR 497
Query: 122 EKLQEEIKSLKAEK 135
E E + K
Sbjct: 498 ESTDTETRGTMTMK 511
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 22/139 (15%)
Query: 17 QNASLDFSWPEQNGSADNDISSTGVVPPENENTRKRARSDSCSRP---GSKACREKLRRE 73
Q S DFS + A +I +V T+++ S P E+ RRE
Sbjct: 73 QLISFDFSSNVISSPAAEEIIMDKLV---GRGTKRKTCSHGTRSPVLAKEHVLAERKRRE 129
Query: 74 RLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEIKSLKA 133
+L+++F+ LS +L PG + DK ILDDAI + Q LQE++++LK
Sbjct: 130 KLSEKFIALSALL-PGLK-KADKVTILDDAISRMKQ--------------LQEQLRTLKE 173
Query: 134 EKNELREEKLILKADKEKL 152
EK R+ + ++ K K+
Sbjct: 174 EKEATRQMESMILVKKSKV 192
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 68 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKE 119
E+ RR++LN+R + LS +L PG +TDK +L+DAI+ L QL+ ++L+E
Sbjct: 137 ERKRRQKLNERLIALSALL-PG-LKKTDKATVLEDAIKHLKQLQERVKKLEE 186
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 60 RPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRT--ESQEL 117
+P + E++RRE+LN RF L ++ ++ DK ++L+DA+ +N+L++ E+ EL
Sbjct: 340 KPLNHVEAERMRREKLNHRFYALRAVVP--NVSKMDKTSLLEDAVCYINELKSKAENVEL 397
Query: 118 KETNEKLQ-EEIKSLKAEKNELREEKLILKADKEKLEQQLKVM 159
++ ++Q E+K + ++N + + E ++ ++K+M
Sbjct: 398 EKHAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIM 440
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 63 SKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNE 122
S E+ RRE+LN++F+ L ++ + DK +IL D I +N LR EL+ T+
Sbjct: 363 SHVVAERRRREKLNEKFITLRSMVP--FVTKMDKVSILGDTIAYVNHLRKRVHELENTHH 420
Query: 123 KLQEE-IKSLKAEKNELREEKLI 144
+ Q + ++ K + +E E +I
Sbjct: 421 EQQHKRTRTCKRKTSEEVEVSII 443
>sp|Q96RT6|CTGE2_HUMAN Protein cTAGE-2 OS=Homo sapiens GN=CTAGE1 PE=1 SV=2
Length = 745
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 98 AILDDAIRVL----NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLE 153
A L+ +++ L NQ+ + E+ +T E+L E IK+L+ E+ L+ E +++ +KL+
Sbjct: 290 AKLNASLKTLEGERNQIYIQLSEVDKTKEELTEHIKNLQTEQASLQSENTHFESENQKLQ 349
Query: 154 QQLKVMA 160
Q+LKVM
Sbjct: 350 QKLKVMT 356
>sp|Q8R311|CTGE5_MOUSE Cutaneous T-cell lymphoma-associated antigen 5 homolog OS=Mus
musculus GN=Ctage5 PE=1 SV=1
Length = 779
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 98 AILDDAIRVL----NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLE 153
A L+ +++ L NQ+ T+ E+ + E L E IKSL++++ L+ EK +++ +KL+
Sbjct: 298 AKLNASLKALEGERNQVYTQLSEVDQVKEDLTEHIKSLESKQASLQSEKTEFESESQKLQ 357
Query: 154 QQLKVMA 160
Q+LKV+
Sbjct: 358 QKLKVIT 364
>sp|O15320|CTGE5_HUMAN Cutaneous T-cell lymphoma-associated antigen 5 OS=Homo sapiens
GN=CTAGE5 PE=1 SV=4
Length = 804
Score = 38.9 bits (89), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 98 AILDDAIRVL----NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLE 153
A L+ +++ L NQ+ + E+ +T E+L E IK+L+ E+ L+ E + + +KL+
Sbjct: 320 AKLNASLKTLEGERNQIYIQLSEVDKTKEELTEHIKNLQTEQASLQSENTHFENENQKLQ 379
Query: 154 QQLKVMA 160
Q+LKVM
Sbjct: 380 QKLKVMT 386
>sp|Q86UF2|CTGE6_HUMAN Putative protein cTAGE-6 OS=Homo sapiens GN=CTAGE6P PE=5 SV=2
Length = 777
Score = 38.5 bits (88), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 108 NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMA 160
N + + E+ +T E+L E IK+L+ ++ L+ E + +++ +KL+Q+LK+M
Sbjct: 336 NHIIIQLSEVDKTKEELTEHIKNLQTQQESLQSENIYFESENQKLQQKLKIMT 388
>sp|P0CG41|CTGE8_HUMAN Cutaneous T-cell lymphoma-associated antigen 8 OS=Homo sapiens
GN=CTAGE8 PE=2 SV=1
Length = 777
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 108 NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMA 160
N + + E+ +T E+L E IK+L+ ++ L+ E + +++ +KL+Q+LK+M
Sbjct: 336 NHIIIQLSEVDKTKEELTEHIKNLQTQQASLQSENIYFESENQKLQQKLKIMT 388
>sp|Q8IX94|CTGE4_HUMAN Cutaneous T-cell lymphoma-associated antigen 4 OS=Homo sapiens
GN=CTAGE4 PE=2 SV=3
Length = 777
Score = 38.1 bits (87), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 108 NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMA 160
N + + E+ +T E+L E IK+L+ ++ L+ E + +++ +KL+Q+LK+M
Sbjct: 336 NHIIIQLSEVDKTKEELTEHIKNLQTQQASLQSENIYFESENQKLQQKLKIMT 388
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana
GN=BHLH41 PE=4 SV=1
Length = 466
Score = 38.1 bits (87), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 68 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEE 127
E+ RRE+LN+ F L +L PG + DK ++L A L+ L+ E +L E N +++ +
Sbjct: 294 ERKRREKLNESFQALRSLLPPG--TKKDKASVLSIAREQLSSLQGEISKLLERNREVEAK 351
Query: 128 IKSLKAEKNELREEK 142
+ + +N+LR E+
Sbjct: 352 LAGEREIENDLRPEE 366
>sp|A4FU28|CTGE9_HUMAN Cutaneous T-cell lymphoma-associated antigen 9 OS=Homo sapiens
GN=CTAGE9 PE=2 SV=2
Length = 777
Score = 38.1 bits (87), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 108 NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMA 160
N + + E+ +T E+L E IK+L+ ++ L+ E + +++ +KL+Q+LK+M
Sbjct: 336 NHIIIQLSEVDKTKEELTEHIKNLQTQQASLQSENIYFESENQKLQQKLKIMT 388
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 38.1 bits (87), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Query: 47 ENTRKRARSDSCSRPG--SKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAI 104
E TR A + P S EK RRE+LN RF L I+ + +R DK ++L DA+
Sbjct: 231 ETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVP--KVSRMDKASLLSDAV 288
Query: 105 RVLNQLRTESQELKETNEKLQEEIKSLK 132
+ + LK + L+ EIK +K
Sbjct: 289 SYI-------ESLKSKIDDLETEIKKMK 309
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 37.7 bits (86), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 31 SADNDISSTGVVPPENENTRKRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGR 90
SA T PP++ T+ RAR + P S A E+LRRER+ +R L ++ G
Sbjct: 119 SASTATGGTVAAPPQSR-TKIRARRGQATDPHSIA--ERLRRERIAERMKALQELVPNGN 175
Query: 91 PARTDKPAILDDAIRVLNQLRTESQEL 117
+TDK ++LD+ I + L+ + + L
Sbjct: 176 --KTDKASMLDEIIDYVKFLQLQVKVL 200
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 37.0 bits (84), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 68 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKE 119
E+ RR++LNDR L ++ R + D+ +IL DAI + +L+ E++EL++
Sbjct: 319 ERRRRKKLNDRLYALRSLVP--RITKLDRASILGDAINYVKELQNEAKELQD 368
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 21/109 (19%)
Query: 48 NTRKRARSDSCSRPGSKA----CREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDA 103
N + R+ SR S A E+ RRE+L RF+ LS ++ PG + DK ++L DA
Sbjct: 133 NRKGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALV-PGL-KKMDKASVLGDA 190
Query: 104 IRVLNQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKL 152
++ + + LQE + L+ +K E R E ++L K KL
Sbjct: 191 LKHI--------------KYLQERVGELEEQKKERRLESMVL-VKKSKL 224
>sp|O97237|YGCC1_PLAF7 GRIP and coiled-coil domain-containing protein PFC0235w
OS=Plasmodium falciparum (isolate 3D7) GN=PFC0235w PE=4
SV=2
Length = 1139
Score = 36.6 bits (83), Expect = 0.12, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 109 QLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEK 151
+L+T ++ LK TNEKL++EI SL E ++ EE +LK KE+
Sbjct: 599 ELKTINEVLKNTNEKLEKEITSLLGEMKKIEEENKVLKIFKEE 641
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 21 LDFSWPEQNGSADNDISSTG------VVPPENENTRKRARSDSCSRPGSKACR----EKL 70
+DFS S +N G V E+ N R R R + ++A E+
Sbjct: 381 IDFSAASSRASENNSDGEGGGEWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQ 440
Query: 71 RRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKL 124
RRE+LN RF L ++ ++ DK ++L DA+ +N+L + + ++ E+L
Sbjct: 441 RREKLNQRFYALRSVVP--NISKMDKASLLGDAVSYINELHAKLKVMEAERERL 492
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 36 ISSTGVVPPENENT-RKRARSDSCSR--PGSKACREKLRRERLNDRFLDLSCILEPGRPA 92
++ G+V +E RKR R + R P + E+ RRE+LN RF L ++ +
Sbjct: 365 LAGAGIVSVVDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVP--NIS 422
Query: 93 RTDKPAILDDAIRVLNQLR 111
+ DK ++L DAI + +L+
Sbjct: 423 KMDKASLLGDAISYIKELQ 441
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 39 TGVVPPENENTRKRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPA 98
+G++ E R++ R ++P + E+ RR LN+R+ L ++ P++ D+ +
Sbjct: 194 SGIIEFSKE-IRRKGRGKRKNKPFTT---ERERRCHLNERYEALKLLIP--SPSKGDRAS 247
Query: 99 ILDDAIRVLNQLRTESQELKETNEK 123
IL D I +N+LR ELK E+
Sbjct: 248 ILQDGIDYINELRRRVSELKYLVER 272
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 50 RKRARSDSCSRPGSKA----CREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIR 105
R R+ S +R S A E+ RRE+L RF+ LS ++ PG + DK ++L DAI+
Sbjct: 109 RGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALI-PGL-KKMDKASVLGDAIK 166
Query: 106 VLNQLR 111
+ L+
Sbjct: 167 HIKYLQ 172
>sp|Q889C2|CLPB_PSESM Chaperone protein ClpB OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=clpB PE=3 SV=1
Length = 854
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 51 KRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTD---KPAILDDAIRVL 107
K A +D +K + +L D+ +DL I E R + KP +LD R L
Sbjct: 362 KVAITDGAIIAAAKLSHRYITDRQLPDKAIDL--IDEAASRIRMEIDSKPEVLDRLERRL 419
Query: 108 NQLRTESQELKETN--------EKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVM 159
QL+ E+Q LK+ EKLQEEI L+ E +L E I ++K ++ ++
Sbjct: 420 IQLKVEAQALKKEKDEAAIKRLEKLQEEIVRLEKEYADLEE---IWTSEKAEVTGSAQIQ 476
Query: 160 AMPTGGYMPTHPAAYHAGLNKMAVYPSYGLMP 191
A LN+MA YG++P
Sbjct: 477 QKIEQSRQELEAARRRGDLNRMAEL-QYGIIP 507
>sp|Q88Q71|CLPB_PSEPK Chaperone protein ClpB OS=Pseudomonas putida (strain KT2440)
GN=clpB PE=3 SV=1
Length = 854
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 47 ENTRKRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTD---KPAILDDA 103
E K A +D +K + +L D+ +DL I E R + KP +LD
Sbjct: 358 EVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDL--IDEAASRIRMEIDSKPEVLDRL 415
Query: 104 IRVLNQLRTESQELKETN--------EKLQEEIKSLKAEKNELREEKLILKADKEKLEQQ 155
R L QL+ ESQ LK+ EKL EEI+ L+ E ++L E I ++K +++
Sbjct: 416 DRRLIQLKVESQALKKEEDEAAKKRLEKLTEEIERLEREYSDLEE---IWASEKAEVQGS 472
Query: 156 LKVMAMPTGGYMPTHPAAYHAGLNKMAVYPSYGLMP 191
++ A LN+MA YG++P
Sbjct: 473 AQIQQKIEQSRQELEAARRKGDLNRMAEL-QYGVIP 507
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 35.0 bits (79), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 68 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNE 122
E+ RRE+LN+ FL L +L R +K +IL + I L +L+ QEL+ + E
Sbjct: 421 ERKRREKLNEMFLVLKSLLPSIH--RVNKASILAETIAYLKELQRRVQELESSRE 473
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 46 NENTRKRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIR 105
N ++ R SR + E+ RR NDRF DL ++ P + D+ +I+ +AI
Sbjct: 233 NNGVTRKGRG---SRKSRTSPTERERRVHFNDRFFDLKNLIP--NPTKIDRASIVGEAID 287
Query: 106 VLNQLRTESQELKETNEK 123
+ +L +E K EK
Sbjct: 288 YIKELLRTIEEFKMLVEK 305
>sp|Q795Q5|YTTA_BACSU Uncharacterized membrane protein YttA OS=Bacillus subtilis (strain
168) GN=yttA PE=2 SV=2
Length = 248
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Query: 107 LNQLRTESQELKETNEKLQEEIKSLKAEKNELRE-------EKLILKADKEKLEQQLK 157
L +L+ E+ +LK+T + L+ EIK L+ + +L+E E L+ DK KLE QLK
Sbjct: 112 LEKLKNENSDLKKTQKSLKAEIKELQENQKQLKEDAKTAKAENETLRQDKTKLENQLK 169
>sp|Q81GM5|CLPB_BACCR Chaperone protein ClpB OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=clpB PE=3 SV=1
Length = 866
Score = 34.3 bits (77), Expect = 0.64, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 75 LNDRFLD---LSCILEPGRPARTD---KPAILDDAIRVLNQLRTESQEL-KETNEKLQEE 127
++DRFL + + E RT+ P LD+ R + QL E L KET+ QE
Sbjct: 384 ISDRFLPDKAIDLVDEACATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQER 443
Query: 128 IKSLKAEKNELREEKLILKADKEKLEQQL 156
+K+L+ E ++L+E ++A EK ++ +
Sbjct: 444 LKTLQRELSDLKEVASGMRAKWEKEKEDI 472
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 68 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETN 121
EK RR R+N++ L ++ +TDK ++LD+AI L QL+ + Q L N
Sbjct: 206 EKRRRSRINEKMKALQSLIP--NSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 257
>sp|Q63665|USF2_RAT Upstream stimulatory factor 2 OS=Rattus norvegicus GN=Usf2 PE=1
SV=2
Length = 346
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 68 EKLRRERLNDRFLDLSCIL----EPGRPARTDKPAILDDAIRVLNQLRTESQELKET--- 120
E+ RR+++N+ + LS I+ K IL A + +LR +Q ++ET
Sbjct: 244 ERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELRQTNQRMQETFKE 303
Query: 121 NEKLQEEIKSLKAEKNELREEKLILKA 147
E+LQ + + L+ + EL+ E +L+A
Sbjct: 304 AERLQMDNELLRQQIEELKNENALLRA 330
>sp|Q64705|USF2_MOUSE Upstream stimulatory factor 2 OS=Mus musculus GN=Usf2 PE=1 SV=1
Length = 346
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 68 EKLRRERLNDRFLDLSCIL----EPGRPARTDKPAILDDAIRVLNQLRTESQELKET--- 120
E+ RR+++N+ + LS I+ K IL A + +LR +Q ++ET
Sbjct: 244 ERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELRQTNQRMQETFKE 303
Query: 121 NEKLQEEIKSLKAEKNELREEKLILKA 147
E+LQ + + L+ + EL+ E +L+A
Sbjct: 304 AERLQMDNELLRQQIEELKNENALLRA 330
>sp|Q15853|USF2_HUMAN Upstream stimulatory factor 2 OS=Homo sapiens GN=USF2 PE=2 SV=1
Length = 346
Score = 34.3 bits (77), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 68 EKLRRERLNDRFLDLSCIL----EPGRPARTDKPAILDDAIRVLNQLRTESQELKET--- 120
E+ RR+++N+ + LS I+ K IL A + +LR +Q ++ET
Sbjct: 244 ERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELRQTNQRMQETFKE 303
Query: 121 NEKLQEEIKSLKAEKNELREEKLILKA 147
E+LQ + + L+ + EL+ E +L+A
Sbjct: 304 AERLQMDNELLRQQIEELKNENALLRA 330
>sp|Q9FLH0|NMCP_ARATH Putative nuclear matrix constituent protein 1-like protein
OS=Arabidopsis thaliana GN=At5g65770 PE=2 SV=1
Length = 1042
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 72 RERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEIKSL 131
+ERL R LDL L+ + DK +D A + L L++E+ EL KL+EE+ L
Sbjct: 482 KERL--RKLDLE--LQQSLTSLEDKRKRVDSATQKLEALKSETSELSTLEMKLKEELDDL 537
Query: 132 KAEKNELREEKLILKADKEKLE 153
+A+K E+ E LK +K K E
Sbjct: 538 RAQKLEMLAEADRLKVEKAKFE 559
>sp|Q9PTD7|CING_XENLA Cingulin OS=Xenopus laevis GN=cgn PE=1 SV=2
Length = 1360
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 92 ARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEIKS---LKAEKNELREEKLILKAD 148
+ D + LD+A R L +L E +EL+E QEE+K LK KNEL E+K +L
Sbjct: 956 VKRDLESKLDEAQRSLKRLSLEYEELQEC---YQEEMKQKDHLKKTKNELEEQKRLLDKS 1012
Query: 149 KEKLEQQLKVMAMPTGGYM 167
+KL ++L M+ + G +
Sbjct: 1013 MDKLTRELDNMSNESRGSL 1031
>sp|P0C1G6|SWP70_BOVIN Switch-associated protein 70 OS=Bos taurus GN=SWAP70 PE=1 SV=1
Length = 585
Score = 33.9 bits (76), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 70 LRRER-LNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEI 128
L+R R L D +L L LE R AR D+ + R+L + ++ EL++ + + Q+ I
Sbjct: 416 LQRVRELEDMYLKLQEALEDERQARQDEETVRKLQARLLEEESSKRAELEKWHLEQQQAI 475
Query: 129 KSLKAEKNELREEKLI 144
++ +AEK EL +++I
Sbjct: 476 QTTEAEKQELENQRVI 491
>sp|P36956|SRBP1_HUMAN Sterol regulatory element-binding protein 1 OS=Homo sapiens
GN=SREBF1 PE=1 SV=2
Length = 1147
Score = 33.9 bits (76), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 68 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEE 127
EK R +ND+ ++L ++ G A+ +K A+L AI + L+ +Q+LK+ N L+
Sbjct: 332 EKRYRSSINDKIIELKDLVV-GTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLRTA 390
Query: 128 IKSLKAEKN 136
+ K+ K+
Sbjct: 391 VHKSKSLKD 399
>sp|Q9UH65|SWP70_HUMAN Switch-associated protein 70 OS=Homo sapiens GN=SWAP70 PE=1 SV=1
Length = 585
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 70 LRRER-LNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEI 128
L+R R L D +L L LE R AR D+ + R+L + ++ EL++ + + Q+ I
Sbjct: 416 LQRVRELEDMYLKLQEALEDERQARQDEETVRKLQARLLEEESSKRAELEKWHLEQQQAI 475
Query: 129 KSLKAEKNELREEKLI----LKADKEKLEQ 154
++ +AEK EL ++++ L+ E+LEQ
Sbjct: 476 QTTEAEKQELENQRVLKEQALQEAMEQLEQ 505
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 38 STGVVPPENENTRKRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKP 97
S PPE R+ S + E++RRE++ +R + L L PG T K
Sbjct: 286 SNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGER-MKLLQDLVPGCNKVTGKA 344
Query: 98 AILDDAIRVLNQLRTE----SQELKETNE-KLQEEIKSLKAE-------KNELREEKLIL 145
+LD+ I + L+ + S +L N+ +L + +L ++ N L EE L
Sbjct: 345 LMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRLHEEGLQS 404
Query: 146 KADKEKLEQQLKV 158
K+ +QQL +
Sbjct: 405 KSSSHHHQQQLNI 417
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 68 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQE- 126
E+ RRER+N L ++ + + +K I DA+ +N+L E Q+L++ + + E
Sbjct: 269 ERKRRERINQAMYGLRAVVP--KITKLNKIGIFSDAVDYINELLVEKQKLEDELKGINEM 326
Query: 127 EIKSLKAEKNEL----REEKLILKADKEKLEQQLKVMAMPTG 164
E K + AE+ E++ K++K + ++K+ TG
Sbjct: 327 ECKEIAAEEQSAIADPEAERVSSKSNKRVKKNEVKIEVHETG 368
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,172,377
Number of Sequences: 539616
Number of extensions: 3561171
Number of successful extensions: 27659
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 746
Number of HSP's that attempted gapping in prelim test: 23655
Number of HSP's gapped (non-prelim): 4454
length of query: 214
length of database: 191,569,459
effective HSP length: 113
effective length of query: 101
effective length of database: 130,592,851
effective search space: 13189877951
effective search space used: 13189877951
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)