Citrus Sinensis ID: 028061

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSEDLRFKTLRDHPREMNSSGLEGSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDSHIHMERQRSVAQLSTPVPSWTGSSKSAHDLHNTI
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHcHHcccccccccccccccHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHcccEcccccHEEEEEEEEEEEccccccccccccccccHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHccccHcccccHHHHHHHHcccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccHccccccHHcHccc
Coil and Loop (DISEMBL)
MAPEYALWGYLTYKADVYSFGVVALEIVsgknnmsyvpdsnctcpldwafhlhqsgtlmefvdprlgsefnKVEAERMIKIALLCtnaspslrptMSEVVSMLegssnipdvipeagglsedLRFKtlrdhpremnssglegslshysssasflpgssstddIREINAEAYLKFKAMRDSHIHMerqrsvaqlstpvpswtgssksahdlhnti
Flexible Loop (DISEMBL)
MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALlctnaspslrPTMSEVVSMLEGSSNIPDVIPEAGGLSEDLRFKTLRDHPREMNSSGLEGSLSHYSSSASflpgssstddIREINAEAYLKFKAMRDSHIHMERQRSvaqlstpvpswtgssksahdlhnti
Low Complexity Region (SEG)
MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSEDLRFKTLRDHPREMNssglegslshysssasflpgsssTDDIREINAEAYLKFKAMRDSHIHMERQRSVAQLSTPVPSWTGSSKSAHDLHNTI
Disordered region (IsUnstruct)
****YALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTN**********************************************************************************AYLKF****************************************
Disordered Region (DISOPRED)
MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS******************************************************************************************************LHN**
Disordered Region (DISEMBL)
MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSEDLRFKTLRDHPR*************************STDDIREINAEAYLKFKAMRDSHIHME*****************************
Disordered Region (DISPRO)
*APEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSEDLRFK****************************************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLSEDLRFKTLRDHPREMNSSGLEGSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDSHIHMERQRSVAQLSTPVPSWTGSSKSAHDLHNTI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	214	2.2.26 [Sep-21-2011]
Q9ASQ6	1019	Probable LRR receptor-lik	no	no	0.607	0.127	0.569	6e-36
C0LGG8	1038	Probable LRR receptor-lik	no	no	0.728	0.150	0.536	4e-35
C0LGE0	1014	Probable LRR receptor-lik	no	no	0.612	0.129	0.526	7e-35
C0LGG9	1035	Probable LRR receptor-lik	no	no	0.598	0.123	0.595	2e-34
Q9FXF2	1021	Probable LRR receptor-lik	no	no	0.644	0.135	0.507	1e-33
C0LGN2	1020	Probable leucine-rich rep	no	no	0.509	0.106	0.587	5e-29
C0LGG7	953	Probable LRR receptor-lik	no	no	0.490	0.110	0.571	5e-28
C0LGH3	1033	Probable LRR receptor-lik	no	no	0.574	0.119	0.504	1e-25
C0LGH2	1032	Probable LRR receptor-lik	no	no	0.574	0.119	0.504	5e-25
Q9CAL2	646	Cysteine-rich receptor-li	no	no	0.5	0.165	0.477	5e-23

>sp|Q9ASQ6|Y1972_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidopsis thaliana GN=RFK1 PE=2 SV=3

 Score =  150 bits (379), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 74/130 (56%), Positives = 90/130 (69%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEYALWG LT KADVYSFGVVA+EIVSGK+N     +++    ++WA  L Q+G ++E
Sbjct: 840 MAPEYALWGQLTEKADVYSFGVVAMEIVSGKSNTKQQGNADSVSLINWALTLQQTGDILE 899

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
            VD  L  EFN+ EA RMIK+AL+CTN+SPSLRPTMSE V MLEG   I  V+ + G   
Sbjct: 900 IVDRMLEGEFNRSEAVRMIKVALVCTNSSPSLRPTMSEAVKMLEGEIEITQVMSDPGIYG 959

Query: 121 EDLRFKTLRD 130
            D     LRD
Sbjct: 960 HDWSISKLRD 969

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|C0LGG8|Y5343_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1

 Score =  147 bits (372), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/164 (53%), Positives = 105/164 (64%), Gaps = 8/164 (4%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEYA+ GYLT KADVYSFGVV LEIVSGK+N +Y P       LDWA+ L + G+L+E
Sbjct: 838 MAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLE 897

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI--PDVIPEAG- 117
            VDP LG+ F+K EA RM+ IALLCTN SP+LRP MS VVSMLEG   +  P V  EA  
Sbjct: 898 LVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLEGKIKVQPPLVKREADP 957

Query: 118 GLSEDLRFKTLRDHPREMNSSGLEGSLSHYSSSASFLPGSSSTD 161
             S  +RFK L     E+ S   E  +S Y+ +      SSS D
Sbjct: 958 SGSAAMRFKAL-----ELLSQDSESQVSTYARNREQDISSSSMD 996

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGE0|Y1765_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1

 Score =  147 bits (370), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 69/131 (52%), Positives = 99/131 (75%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEYA+ GYLT KADVYSFGVVALEIVSGK+N ++ P  +    LDWA+ L + G+L+E
Sbjct: 848 MAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAYVLQERGSLLE 907

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
            VDP L S++++ EA  M+ +AL+CTNASP+LRPTMS+VVS++EG + + +++ +    +
Sbjct: 908 LVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLIEGKTAMQELLSDPSFST 967

Query: 121 EDLRFKTLRDH 131
            + + K LR+H
Sbjct: 968 VNPKLKALRNH 978

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGG9|Y5344_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2

 Score =  145 bits (366), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/131 (59%), Positives = 92/131 (70%), Gaps = 3/131 (2%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEYA+ GYLT KADVYSFGVV LEIVSGK+N +Y P       LDWA+ L + G+L+E
Sbjct: 836 MAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLE 895

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI--PDVIPEAG- 117
            VDP LG+ F+K EA RM+ IALLCTN SP+LRP MS VVSML+G   +  P V  EA  
Sbjct: 896 LVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQPPLVKREADP 955

Query: 118 GLSEDLRFKTL 128
             S  +RFK L
Sbjct: 956 SGSAAMRFKAL 966

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FXF2|RKF1_ARATH Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1

 Score =  142 bits (359), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/138 (50%), Positives = 97/138 (70%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEYALWGYLT+KADVYSFGV+ LEIV+G  N +++   +  C L++A    +SG LM+
Sbjct: 850 MAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNFMGAGDSVCLLEFANECVESGHLMQ 909

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
            VD RL  E ++ EAE +IK+AL+C++ASP+ RP MSEVV+MLEG   +P+  P     +
Sbjct: 910 VVDERLRPEVDRKEAEAVIKVALVCSSASPTDRPLMSEVVAMLEGLYPVPESTPGVSRNA 969

Query: 121 EDLRFKTLRDHPREMNSS 138
            D+RFK  +D  R M ++
Sbjct: 970 GDIRFKAFKDLRRGMENN 987

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGN2|Y3148_ARATH Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=1 SV=1

 Score =  127 bits (319), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/109 (58%), Positives = 80/109 (73%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEYA+ G+LT KADVYSFGVVALEIV GK+N S    ++    LDW   L +  TL+E
Sbjct: 841 MAPEYAMRGHLTDKADVYSFGVVALEIVHGKSNTSSRSKADTFYLLDWVHVLREQNTLLE 900

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 109
            VDPRLG+++NK EA  MI+I +LCT+ +P  RP+MS VVSMLEG S +
Sbjct: 901 VVDPRLGTDYNKQEALMMIQIGMLCTSPAPGDRPSMSTVVSMLEGHSTV 949

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGG7|Y1534_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2

 Score =  124 bits (311), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 60/105 (57%), Positives = 77/105 (73%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEYA+ G+LT KADVYSFG+VALEIV G++N      +N    +DW   L +   L+E
Sbjct: 793 MAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLE 852

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 105
            VDPRLGSE+N+ EA  MI+IA++CT++ P  RP+MSEVV MLEG
Sbjct: 853 LVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLEG 897

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2

 Score =  116 bits (290), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/125 (50%), Positives = 84/125 (67%), Gaps = 2/125 (1%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           +APEYA+ G+LT K DVY+FGVVALE+VSG+ N     +      L+WA++LH+ G  +E
Sbjct: 860 LAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAWNLHEKGREVE 919

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
            +D +L +EFN  E +RMI IALLCT  S +LRP MS VV+ML G   + DV  + G L+
Sbjct: 920 LIDHQL-TEFNMEEGKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEVSDVTSKPGYLT 978

Query: 121 EDLRF 125
            D RF
Sbjct: 979 -DWRF 982

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGH2|Y1561_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2

 Score =  114 bits (285), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/125 (50%), Positives = 84/125 (67%), Gaps = 2/125 (1%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           +APEYA+ G+LT K DVY+FGVVALE+VSG+ N     +      L+WA++LH+    +E
Sbjct: 861 LAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSRDIE 920

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
            +D +L ++FN  EA+RMI IALLCT  S +LRP MS VV+ML G   I DV  + G +S
Sbjct: 921 LIDDKL-TDFNMEEAKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEIGDVTSKPGYVS 979

Query: 121 EDLRF 125
            D RF
Sbjct: 980 -DWRF 983

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9CAL2|CRK3_ARATH Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1

 Score =  107 bits (267), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 73/109 (66%), Gaps = 2/109 (1%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEY + G LT KADVYSFGV+ +E+++GK N ++V D+       W+  L+++  + E
Sbjct: 491 MAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSILQSVWS--LYRTSNVEE 548

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 109
            VDP LG  FNK+EA R+++I LLC  A+   RP MS VV M++GS  I
Sbjct: 549 AVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMKGSLEI 597

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
297740557	839	unnamed protein product [Vitis vinifera]	0.985	0.251	0.573	1e-60
359483540	1066	PREDICTED: probable LRR receptor-like se	0.985	0.197	0.573	2e-60
147838007	667	hypothetical protein VITISV_025000 [Viti	0.985	0.316	0.573	2e-60
255562540	2046	kinase, putative [Ricinus communis] gi|2	0.887	0.092	0.613	8e-59
224116760	1024	predicted protein [Populus trichocarpa]	0.915	0.191	0.538	2e-51
224079009	1030	predicted protein [Populus trichocarpa]	0.911	0.189	0.561	3e-51
297740568	522	unnamed protein product [Vitis vinifera]	0.607	0.249	0.730	4e-50
297740570	511	unnamed protein product [Vitis vinifera]	0.747	0.313	0.627	7e-50
297740572	540	unnamed protein product [Vitis vinifera]	0.747	0.296	0.631	3e-49
359483557	948	PREDICTED: probable LRR receptor-like se	0.747	0.168	0.631	4e-49

>gi|297740557|emb|CBI30739.3| unnamed protein product [Vitis vinifera]

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/218 (57%), Positives = 152/218 (69%), Gaps = 7/218 (3%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEYALWGYLTYKADVYSFGVVALEIVSGK+NMSY P ++C C LDWA  L QSG +ME
Sbjct: 553 MAPEYALWGYLTYKADVYSFGVVALEIVSGKHNMSYQPKNDCACLLDWACSLQQSGDIME 612

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
            VD +LGSEFNK EAERMIK+ALLCTNASPSLRP MSE VSMLEG + IPD IPEAG  S
Sbjct: 613 LVDQKLGSEFNKKEAERMIKVALLCTNASPSLRPNMSEAVSMLEGITTIPDAIPEAGSYS 672

Query: 121 EDLRFKTLRDHPREMNSSGLEGSLSHYSSS----ASFLPGSSSTDDIREINAEAYLKFKA 176
           EDLRFK +R++ +   S  LE S     S+    A     S+S  D+ +IN E+YL+ ++
Sbjct: 673 EDLRFKAIREYHKHTRSKVLEISEVQADSTSGRQAWIQSTSASAHDLYDINMESYLRSRS 732

Query: 177 MRDSHIHMERQRS---VAQLSTPVPSWTGSSKSAHDLH 211
            R  +  +E   S     ++++  P  + SS S  DL+
Sbjct: 733 TRQHNTEIESHLSEGTQTEITSKHPWISSSSTSGQDLY 770

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483540|ref|XP_002264878.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1-like [Vitis vinifera]

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/218 (57%), Positives = 152/218 (69%), Gaps = 7/218 (3%)

Query: 1    MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            MAPEYALWGYLTYKADVYSFGVVALEIVSGK+NMSY P ++C C LDWA  L QSG +ME
Sbjct: 842  MAPEYALWGYLTYKADVYSFGVVALEIVSGKHNMSYQPKNDCACLLDWACSLQQSGDIME 901

Query: 61   FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
             VD +LGSEFNK EAERMIK+ALLCTNASPSLRP MSE VSMLEG + IPD IPEAG  S
Sbjct: 902  LVDQKLGSEFNKKEAERMIKVALLCTNASPSLRPNMSEAVSMLEGITTIPDAIPEAGSYS 961

Query: 121  EDLRFKTLRDHPREMNSSGLEGSLSHYSSS----ASFLPGSSSTDDIREINAEAYLKFKA 176
            EDLRFK +R++ +   S  LE S     S+    A     S+S  D+ +IN E+YL+ ++
Sbjct: 962  EDLRFKAIREYHKHTRSKVLEISEVQADSTSGRQAWIQSTSASAHDLYDINMESYLRSRS 1021

Query: 177  MRDSHIHMERQRS---VAQLSTPVPSWTGSSKSAHDLH 211
             R  +  +E   S     ++++  P  + SS S  DL+
Sbjct: 1022 TRQHNTEIESHLSEGTQTEITSKHPWISSSSTSGQDLY 1059

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838007|emb|CAN73789.1| hypothetical protein VITISV_025000 [Vitis vinifera]

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/218 (57%), Positives = 151/218 (69%), Gaps = 7/218 (3%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEYALWGYLTYKADVYSFGVVALEIVSGK+N SY P ++C C LDWA  L QSG +ME
Sbjct: 443 MAPEYALWGYLTYKADVYSFGVVALEIVSGKHNXSYXPKNDCACLLDWACXLQQSGDIME 502

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
            VD +LGSEFNK EAERMIK+ALLCTNASPSLRP MSE VSMLEG + IPD IPEAG  S
Sbjct: 503 LVDQKLGSEFNKKEAERMIKVALLCTNASPSLRPNMSEAVSMLEGITTIPDAIPEAGSYS 562

Query: 121 EDLRFKTLRDHPREMNSSGLEGSL----SHYSSSASFLPGSSSTDDIREINAEAYLKFKA 176
           EDLRFK +R++ +   S  LE S     S   S A     S+S  D+ +IN E+YL+ ++
Sbjct: 563 EDLRFKAIREYHKHTRSXVLEISKVQADSTSGSQAWIQSTSASAHDLYDINMESYLRSRS 622

Query: 177 MRDSHIHMERQRSVA---QLSTPVPSWTGSSKSAHDLH 211
            R  +  +E   S     ++++  P  + SS S  DL+
Sbjct: 623 TRQHNTEIESHLSEGTQTEITSKHPWISSSSTSGQDLY 660

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562540|ref|XP_002522276.1| kinase, putative [Ricinus communis] gi|223538529|gb|EEF40134.1| kinase, putative [Ricinus communis]

 Score =  232 bits (591), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 119/194 (61%), Positives = 141/194 (72%), Gaps = 4/194 (2%)

Query: 1    MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            MAPEYALWGYLTYKAD+YSFG+VALEIVSGK+NMS  P+SN  C LDWA HL Q G LME
Sbjct: 823  MAPEYALWGYLTYKADIYSFGIVALEIVSGKHNMSRGPESNFGCLLDWACHLQQGGKLME 882

Query: 61   FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
             VD +LGSEF KVEAERMIK+ALLCTN S SLRP MSEVVSMLEG+  IPDVIPE    +
Sbjct: 883  LVDEKLGSEFKKVEAERMIKVALLCTNGSASLRPIMSEVVSMLEGTKTIPDVIPEESSYN 942

Query: 121  EDLRFKTLRDHPREMNSSGLEGSLSHYSSSASFL---PGSSSTDDIREINAEAYLKFKAM 177
            EDLRFK +R+H +E+ S  L  S +H S+S+ +      S++T D+ EI +E Y   KA 
Sbjct: 943  EDLRFKAIREHHKEIRSQSLR-SQNHTSTSSGWSRLDSSSATTHDLYEIKSELYANAKAK 1001

Query: 178  RDSHIHMERQRSVA 191
             D    M+ Q S +
Sbjct: 1002 GDQDKQMDSQVSTS 1015

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116760|ref|XP_002317385.1| predicted protein [Populus trichocarpa] gi|222860450|gb|EEE97997.1| predicted protein [Populus trichocarpa]

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/210 (53%), Positives = 147/210 (70%), Gaps = 14/210 (6%)

Query: 1    MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            MAPEYALWG LTYKADVYSFG+VALEIVSGK NMS  P++  +C LDWA HL ++G L+E
Sbjct: 825  MAPEYALWGRLTYKADVYSFGIVALEIVSGKYNMSCGPENQYSCLLDWACHLERNGNLIE 884

Query: 61   FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
             VD +LGSEFNKVEA+RMIK+ALLC NASP LRP MSEVVSMLEG+  IP+VIPE   +S
Sbjct: 885  LVDRKLGSEFNKVEAQRMIKVALLCANASPLLRPIMSEVVSMLEGTRIIPEVIPEP--IS 942

Query: 121  EDLRFKTLRDHP---REMNSSGLEGSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAM 177
            EDLRFK +R H    R +   G +  L   ++S+S++    + DD+ E + E+ ++    
Sbjct: 943  EDLRFKAIRGHQEQTRSLRERGNQTILDRSATSSSYV---CTDDDLWETDTESNVR---- 995

Query: 178  RDSHIHMERQRSVAQLSTPVPSWTGSSKSA 207
              S+   ++  S A++ST V   T SS ++
Sbjct: 996  --SNTRSKQHESPAEVSTSVLPVTASSSTS 1023

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079009|ref|XP_002305716.1| predicted protein [Populus trichocarpa] gi|222848680|gb|EEE86227.1| predicted protein [Populus trichocarpa]

 Score =  207 bits (527), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/221 (56%), Positives = 148/221 (66%), Gaps = 26/221 (11%)

Query: 1    MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            MAPEYALWG LTYKADVYSFG+VALEIVSGK+N S  PD   +C LDWA HL Q+G L+E
Sbjct: 816  MAPEYALWGRLTYKADVYSFGIVALEIVSGKHNKSCGPDDQFSCLLDWACHLEQNGNLIE 875

Query: 61   FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
             VD +LGSEFNKVEAER+IK+ALLC NASPSLRP MSEVVSM+EG+  IPDVIPE    S
Sbjct: 876  IVDQKLGSEFNKVEAERLIKVALLCANASPSLRPIMSEVVSMIEGTRIIPDVIPEPN--S 933

Query: 121  EDLRFKTLRDHPREMNSSGLEGSLSHYSSSASFLPGSSS------TDD-----IREINAE 169
            EDLRFK +R  P E   S L+G+     +S+S L  S +      TDD      +E+NA 
Sbjct: 934  EDLRFKAIRG-PDERIRSSLKGN----QNSSSILDRSDNNSSHVYTDDDDPYETKELNAR 988

Query: 170  AYLKFKAMRDSHIHMERQRSVAQLSTPVPSWTG-SSKSAHD 209
               + K       H ++  S +++ST V S T  SS S HD
Sbjct: 989  FDTRSK-------HYKQPESRSEVSTSVLSETAVSSTSVHD 1022

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740568|emb|CBI30750.3| unnamed protein product [Vitis vinifera]

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 95/130 (73%), Positives = 109/130 (83%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEYALWGYLT KAD+YSFGVVALEIVSGKNN SY P++ C C LD AF L Q G+LME
Sbjct: 370 MAPEYALWGYLTNKADIYSFGVVALEIVSGKNNTSYKPENECVCLLDLAFVLQQRGSLME 429

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
            VDP+LGSEFN+ EAERMIK+ALLCTNASP+LRPTMS VVSMLEG + + DVI + G  +
Sbjct: 430 IVDPKLGSEFNQDEAERMIKVALLCTNASPTLRPTMSAVVSMLEGQTVVQDVISDPGIYN 489

Query: 121 EDLRFKTLRD 130
           +DLRF+ LRD
Sbjct: 490 DDLRFRPLRD 499

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740570|emb|CBI30752.3| unnamed protein product [Vitis vinifera]

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 101/161 (62%), Positives = 121/161 (75%), Gaps = 1/161 (0%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEYALWG+LT KAD+YSFGVVALEIVSGKNN S  P++ C C LD AF L Q G+LME
Sbjct: 324 MAPEYALWGHLTDKADIYSFGVVALEIVSGKNNSSRKPENECVCLLDRAFALQQKGSLME 383

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
            VDP+LGSEFN+ EAERMIK+A+LCTNASP+LRP MS VVSMLEG + +P+VI +A    
Sbjct: 384 IVDPKLGSEFNRDEAERMIKVAILCTNASPTLRPIMSAVVSMLEGQTIVPEVISDASMDE 443

Query: 121 EDLRFKTLRDHPREMNSSGLEGS-LSHYSSSASFLPGSSST 160
           + L FK+L D+ + M    L GS  S +SS  +   GSSST
Sbjct: 444 DYLNFKSLGDYHKRMQKQILSGSEASKFSSDGTIATGSSST 484

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740572|emb|CBI30754.3| unnamed protein product [Vitis vinifera]

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 101/160 (63%), Positives = 114/160 (71%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEYALWGYLT KADVYSFGVV LEIVSGKNN +Y PD+ CTC LDWAF L Q G+LME
Sbjct: 380 MAPEYALWGYLTDKADVYSFGVVTLEIVSGKNNSNYTPDTTCTCLLDWAFVLKQKGSLME 439

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
            VDP LG+EFNK EAE MIK+ALLCTNAS  LRPTMS V+ MLEG   IP+VI +     
Sbjct: 440 LVDPNLGTEFNKKEAETMIKVALLCTNASSKLRPTMSAVLRMLEGQDIIPEVISDPSIYG 499

Query: 121 EDLRFKTLRDHPREMNSSGLEGSLSHYSSSASFLPGSSST 160
           +D+R   LRDH + M      GSL+   S      GSSS+
Sbjct: 500 KDMRISPLRDHYQHMEMQSSSGSLAPNFSLDGAQVGSSSS 539

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483557|ref|XP_002264074.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g29720-like [Vitis vinifera]

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 101/160 (63%), Positives = 114/160 (71%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPEYALWGYLT KADVYSFGVV LEIVSGKNN +Y PD+ CTC LDWAF L Q G+LME
Sbjct: 788 MAPEYALWGYLTDKADVYSFGVVTLEIVSGKNNSNYTPDTTCTCLLDWAFVLKQKGSLME 847

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
            VDP LG+EFNK EAE MIK+ALLCTNAS  LRPTMS V+ MLEG   IP+VI +     
Sbjct: 848 LVDPNLGTEFNKKEAETMIKVALLCTNASSKLRPTMSAVLRMLEGQDIIPEVISDPSIYG 907

Query: 121 EDLRFKTLRDHPREMNSSGLEGSLSHYSSSASFLPGSSST 160
           +D+R   LRDH + M      GSL+   S      GSSS+
Sbjct: 908 KDMRISPLRDHYQHMEMQSSSGSLAPNFSLDGAQVGSSSS 947

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
TAIR|locus:2019367	1078	AT1G29740 [Arabidopsis thalian	0.588	0.116	0.590	7.3e-35
TAIR|locus:2019317	969	AT1G29730 [Arabidopsis thalian	0.588	0.130	0.582	2.4e-33
TAIR|locus:2203718	1035	AT1G53440 [Arabidopsis thalian	0.607	0.125	0.582	2.3e-31
TAIR|locus:2203847	1021	RKF1 "receptor-like kinase in	0.630	0.132	0.518	2.3e-31
TAIR|locus:2009630	953	AT1G53420 [Arabidopsis thalian	0.598	0.134	0.496	7.3e-26
TAIR|locus:2205250	1032	AT1G56130 [Arabidopsis thalian	0.574	0.119	0.504	9e-24
TAIR|locus:2205260	1047	AT1G56120 [Arabidopsis thalian	0.560	0.114	0.479	5.2e-23
TAIR|locus:2026785	646	CRK3 "cysteine-rich RLK (RECEP	0.5	0.165	0.477	3e-21
TAIR|locus:2017923	390	AT1G16670 [Arabidopsis thalian	0.588	0.323	0.433	1.5e-19
TAIR|locus:2123111	669	CRK34 "cysteine-rich RLK (RECE	0.542	0.173	0.425	1.6e-18

TAIR|locus:2019367 AT1G29740 [Arabidopsis thaliana (taxid:3702)]

 Score = 389 (142.0 bits), Expect = 7.3e-35, P = 7.3e-35
 Identities = 75/127 (59%), Positives = 97/127 (76%)

Query:     1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPL-DWAFHLHQSGTLM 59
             MAPEYA+ G+LT KADVYSFGVVA+EIVSGK+N +Y PD+ C   L DWAF L + G   
Sbjct:   844 MAPEYAMRGHLTEKADVYSFGVVAMEIVSGKSNANYTPDNECCVGLLDWAFVLQKKGAFD 903

Query:    60 EFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGL 119
             E +DP+L   F+ +EAERMIK++LLC++ SP+LRPTMSEVV MLEG + I ++I + G  
Sbjct:   904 EILDPKLEGVFDVMEAERMIKVSLLCSSKSPTLRPTMSEVVKMLEGETEIEEIISDPGAY 963

Query:   120 SEDLRFK 126
              ++LRFK
Sbjct:   964 GDELRFK 970

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019317 AT1G29730 [Arabidopsis thaliana (taxid:3702)]

 Score = 374 (136.7 bits), Expect = 2.4e-33, P = 2.4e-33
 Identities = 74/127 (58%), Positives = 92/127 (72%)

Query:     1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPL-DWAFHLHQSGTLM 59
             MAPEYA+ G+LT KADVYSFGVVA+EIVSGK+N  Y PD  C   L DWAF L + G + 
Sbjct:   808 MAPEYAMRGHLTEKADVYSFGVVAMEIVSGKSNAKYTPDDECCVGLLDWAFVLQKKGDIA 867

Query:    60 EFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGL 119
             E +DPRL   F+ +EAERMIK++LLC N S +LRP MS+VV MLEG + I  +I + G  
Sbjct:   868 EILDPRLEGMFDVMEAERMIKVSLLCANKSSTLRPNMSQVVKMLEGETEIEQIISDPGVY 927

Query:   120 SEDLRFK 126
             S++L FK
Sbjct:   928 SDNLHFK 934

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2203718 AT1G53440 [Arabidopsis thaliana (taxid:3702)]

 Score = 356 (130.4 bits), Expect = 2.3e-31, P = 2.3e-31
 Identities = 78/134 (58%), Positives = 95/134 (70%)

Query:     1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
             MAPEYA+ GYLT KADVYSFGVV LEIVSGK+N +Y P       LDWA+ L + G+L+E
Sbjct:   836 MAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLE 895

Query:    61 FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI-PDVIP-EAGG 118
              VDP LG+ F+K EA RM+ IALLCTN SP+LRP MS VVSML+G   + P ++  EA  
Sbjct:   896 LVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQPPLVKREADP 955

Query:   119 L-SEDLRFKTLRDH 131
               S  +RFK L +H
Sbjct:   956 SGSAAMRFKAL-EH 968

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2203847 RKF1 "receptor-like kinase in flowers 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 345 (126.5 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
 Identities = 70/135 (51%), Positives = 95/135 (70%)

Query:     1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
             MAPEYALWGYLT+KADVYSFGV+ LEIV+G  N +++   +  C L++A    +SG LM+
Sbjct:   850 MAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNFMGAGDSVCLLEFANECVESGHLMQ 909

Query:    61 FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
              VD RL  E ++ EAE +IK+AL+C++ASP+ RP MSEVV+MLEG   +P+  P     +
Sbjct:   910 VVDERLRPEVDRKEAEAVIKVALVCSSASPTDRPLMSEVVAMLEGLYPVPESTPGVSRNA 969

Query:   121 EDLRFKTLRDHPREM 135
              D+RFK  +D  R M
Sbjct:   970 GDIRFKAFKDLRRGM 984

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2009630 AT1G53420 [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 7.3e-26, P = 7.3e-26
 Identities = 64/129 (49%), Positives = 86/129 (66%)

Query:     1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
             MAPEYA+ G+LT KADVYSFG+VALEIV G++N      +N    +DW   L +   L+E
Sbjct:   793 MAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLE 852

Query:    61 FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIP-DVIPEAGGL 119
              VDPRLGSE+N+ EA  MI+IA++CT++ P  RP+MSEVV MLEG   +  + + EA   
Sbjct:   853 LVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLEGKKMVEVEKLEEASVH 912

Query:   120 SEDLRFKTL 128
              E  R + +
Sbjct:   913 RETKRLENM 921

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2205250 AT1G56130 [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 9.0e-24, P = 9.0e-24
 Identities = 63/125 (50%), Positives = 84/125 (67%)

Query:     1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
             +APEYA+ G+LT K DVY+FGVVALE+VSG+ N     +      L+WA++LH+    +E
Sbjct:   861 LAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSRDIE 920

Query:    61 FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
              +D +L ++FN  EA+RMI IALLCT  S +LRP MS VV+ML G   I DV  + G +S
Sbjct:   921 LIDDKL-TDFNMEEAKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEIGDVTSKPGYVS 979

Query:   121 EDLRF 125
              D RF
Sbjct:   980 -DWRF 983

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2205260 AT1G56120 [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 5.2e-23, P = 5.2e-23
 Identities = 58/121 (47%), Positives = 81/121 (66%)

Query:     1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
             +APEYA+ G+LT K DVY+FGVVALE+VSG+ N     +      L+WA++LH+    +E
Sbjct:   877 LAPEYAMRGHLTEKTDVYAFGVVALELVSGRKNSDENLEEGKKYLLEWAWNLHEKNRDVE 936

Query:    61 FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
              +D  L SE+N  E +RMI IALLCT +S +LRP MS VV+ML G + + D   + G L+
Sbjct:   937 LIDDEL-SEYNMEEVKRMIGIALLCTQSSYALRPPMSRVVAMLSGDAEVNDATSKPGYLT 995

Query:   121 E 121
             +
Sbjct:   996 D 996

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2026785 CRK3 "cysteine-rich RLK (RECEPTOR-like protein kinase) 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 52/109 (47%), Positives = 73/109 (66%)

Query:     1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
             MAPEY + G LT KADVYSFGV+ +E+++GK N ++V D+       W+  L+++  + E
Sbjct:   491 MAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSILQSVWS--LYRTSNVEE 548

Query:    61 FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 109
              VDP LG  FNK+EA R+++I LLC  A+   RP MS VV M++GS  I
Sbjct:   549 AVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMKGSLEI 597

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

TAIR|locus:2017923 AT1G16670 [Arabidopsis thaliana (taxid:3702)]

 Score = 236 (88.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 55/127 (43%), Positives = 78/127 (61%)

Query:     1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
             +APEYA+ G LT KAD+YSFGV+ +EIVSG++N +    +     L+ A+ L++   L++
Sbjct:   212 LAPEYAVRGQLTRKADIYSFGVLLMEIVSGRSNKNTRLPTEYQYLLERAWELYERNELVD 271

Query:    61 FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIP-DVIPEAGGL 119
              VD  L   F+  EA R +KI LLCT  SP LRP+MS VV +L G  +I    I   G +
Sbjct:   272 LVDSGLNGVFDAEEACRYLKIGLLCTQDSPKLRPSMSTVVRLLTGEKDIDYKKISRPGLI 331

Query:   120 SEDLRFK 126
             S+ +  K
Sbjct:   332 SDFMDLK 338

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

TAIR|locus:2123111 CRK34 "cysteine-rich RLK (RECEPTOR-like protein kinase) 34" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.6e-18, P = 1.6e-18
 Identities = 51/120 (42%), Positives = 73/120 (60%)

Query:     1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY--VPDSNCTCPLDWAFHLHQSGTL 58
             M+PEYA+ G+ + K+DVYSFGV+ LEI+SGK N S+  + DS     +  A+ L ++G+ 
Sbjct:   514 MSPEYAMRGHFSMKSDVYSFGVLVLEIISGKKNSSFYNIDDSGSNL-VTHAWRLWRNGSP 572

Query:    59 MEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGG 118
             +E VDP +G  +   EA R I IALLC    P+ RP +  ++ ML  S+    V P A G
Sbjct:   573 LELVDPTIGESYQSSEATRCIHIALLCVQEDPADRPLLPAIIMMLTSSTTTLHV-PRAPG 631

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	214
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-08
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-06
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	2e-06
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-05
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-04
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-04
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-04
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	0.001
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.001
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	0.001
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	0.001
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	0.002
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	0.002
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	0.002
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.002
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	0.003
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	0.004
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	0.004

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 17/105 (16%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLM 59
           MAPE    G  T K+DV+SFGV+  EI + G       P        +      + G  +
Sbjct: 174 MAPESLKDGIFTSKSDVWSFGVLLWEIFTLGA-----TPYPG--LSNEEVLEYLRKGYRL 226

Query: 60  EFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
               P           + + ++ L C    P  RPT SE+V  LE
Sbjct: 227 PK--PEYCP-------DELYELMLSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 35/114 (30%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYVPDSNCTCPLDWAF 50
           MAPE    G  T K+DV+SFGVV  E+ +       G +N   + +V D           
Sbjct: 188 MAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG--------- 238

Query: 51  HLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           HL       +                 ++++  +C   +P +RPT  E+VS L+
Sbjct: 239 HLDLPENCPDK----------------LLELMRMCWQYNPKMRPTFLEIVSSLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 3/109 (2%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           +APE      +T K+D+Y FG++ +E+++GK+        + +  ++WA + +    L  
Sbjct: 845 VAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSI-VEWARYCYSDCHLDM 903

Query: 61  FVDP--RLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 107
           ++DP  R     N+ E   ++ +AL CT   P+ RP  ++V+  LE +S
Sbjct: 904 WIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS 952

Length = 968

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 17/104 (16%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLM 59
           MAPE    G  T K+DV+SFGV+  EI + G+    Y   SN          L + G  +
Sbjct: 171 MAPESLKDGKFTSKSDVWSFGVLLWEIFTLGE--QPYPGMSNEE-----VLELLEDGYRL 223

Query: 60  EFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 103
               P           + + ++ L C    P  RPT SE+V  L
Sbjct: 224 PR--PENCP-------DELYELMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 19/106 (17%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           M PE  L G  T K DV+SFGV+  EI S    + Y+P    T           +  +ME
Sbjct: 188 MPPEAFLDGIFTSKTDVWSFGVLLWEIFS----LGYMPYPGRT-----------NQEVME 232

Query: 61  FVDP--RLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           FV    RL           + +I   C   +P  RP  + ++  ++
Sbjct: 233 FVTGGGRLDPPKGC--PGPVYRIMTDCWQHTPEDRPNFATILERIQ 276

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 17/104 (16%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLM 59
           MAPE    G  T K+DV+SFGV+  EI + G+    Y   SN     +   +L ++G  +
Sbjct: 170 MAPESLKEGKFTSKSDVWSFGVLLWEIFTLGE--QPYPGMSN----EEVLEYL-KNGYRL 222

Query: 60  EFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 103
               P             +  + L C    P  RPT SE+V +L
Sbjct: 223 PQ--PPNCP-------PELYDLMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 16/100 (16%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE         KAD++S G+ A+E+  G+      P ++   P+   F + +      
Sbjct: 168 MAPEVIQQSAYDSKADIWSLGITAIELAKGE------PPNSDMHPMRVLFLIPK------ 215

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVV 100
              P L  EF+K   E        C N  PS RPT  E++
Sbjct: 216 NNPPTLTGEFSKPFKE----FIDACLNKDPSFRPTAKELL 251

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 23/107 (21%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLH---QSG 56
           MAPE    G  T K+DV+SFGV+  EI + G+    Y   SN          +    + G
Sbjct: 171 MAPESLKEGKFTSKSDVWSFGVLLWEIFTLGE--EPYPGMSN--------AEVLEYLKKG 220

Query: 57  TLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSML 103
             +    P             + K+ L C    P  RPT SE+V +L
Sbjct: 221 YRLPK--PPNCP-------PELYKLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 1   MAPEYAL-WGYLTYKADVYSFGVVALEI 27
           MAPE  L  GY + K+D++S GV+  E+
Sbjct: 160 MAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE       T+++DV+SFGV+  EI       +         P++  F L + G  ME
Sbjct: 201 MAPEALFDRVYTHQSDVWSFGVLLWEI------FTLGGSPYPGIPVEELFKLLKEGYRME 254

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              P+  +       + +  +   C +  PS RPT  ++V  L+
Sbjct: 255 --KPQNCT-------QELYHLMRDCWHEVPSQRPTFKQLVEDLD 289

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 17/105 (16%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLM 59
           MA E       T ++DV+SFGV+  EIV+ G N    +            F+L ++G  M
Sbjct: 196 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL-------FNLLKTGYRM 248

Query: 60  EFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           E  +           +E M  + L C    P  RPT +++   LE
Sbjct: 249 ERPENC---------SEEMYNLMLTCWKQEPDKRPTFADISKELE 284

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query: 2   APEYALWGYLTYKADVYSFGVVALEIVS 29
           APE A +G  T K+DV+SFG++  EIV+
Sbjct: 172 APEAANYGRFTIKSDVWSFGILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 33/114 (28%), Positives = 44/114 (38%), Gaps = 37/114 (32%)

Query: 2   APEYALWGYLTYKADVYSFGVVALEIVS-------GKNNMSYVPDSN----CTCPLDWAF 50
           APE AL+G  T K+DV+SFG++  E+V+       G NN   +          CP D   
Sbjct: 171 APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPI 230

Query: 51  HLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
            LH                      E M++    C    P  RPT   + S LE
Sbjct: 231 SLH----------------------ELMLQ----CWKKDPEERPTFEYLQSFLE 258

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 16/105 (15%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFH-LHQSGTLM 59
           MAPE       T+++DV+S+G++  EI S  +  S  P      P+D  F+ + + G  M
Sbjct: 283 MAPESIFNCVYTFESDVWSYGILLWEIFSLGS--SPYPG----MPVDSKFYKMIKEGYRM 336

Query: 60  EFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
                 L  E    E   M  I   C +A P  RPT  ++V ++E
Sbjct: 337 ------LSPECAPSE---MYDIMKSCWDADPLKRPTFKQIVQLIE 372

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 37.9 bits (89), Expect = 0.002
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 23/104 (22%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE  L        D++S GV+  E+++GK             P        Q   L +
Sbjct: 163 MAPEVLLGKGYGKAVDIWSLGVILYELLTGKP------------PFP---GDDQLLELFK 207

Query: 61  FV---DPRLGSEFNKV--EAERMIKIALLCTNASPSLRPTMSEV 99
            +    P        +  EA+ +I+  LL  +  P  R T  E 
Sbjct: 208 KIGKPKPPFPPPEWDISPEAKDLIR-KLLVKD--PEKRLTAEEA 248

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP 38
           MAPE        YKAD++S G+ A+E+  GK   S +P
Sbjct: 164 MAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELP 201

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 37.3 bits (86), Expect = 0.003
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 15/103 (14%)

Query: 2   APEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEF 61
           APE AL+G  T K+DV+SFG++  E+V+ K  + Y    N                ++E 
Sbjct: 171 APEAALYGRFTIKSDVWSFGILLTELVT-KGRVPYPGMVN--------------REVLEQ 215

Query: 62  VDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           V+        +   E + ++  LC    P  RPT   + S LE
Sbjct: 216 VERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLE 258

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 23/98 (23%)

Query: 11  LTYKADVYSFGVVALEIVSGK---NNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLG 67
            T K D+YS GVV  EI +GK    N++                      + + +  +  
Sbjct: 199 YTIKDDIYSLGVVLWEIFTGKIPFENLTTK-------------------EIYDLIINKNN 239

Query: 68  SEFNKVEAERMIK-IALLCTNASPSLRPTMSEVVSMLE 104
           S    ++    IK I   CT+     RP + E++  L 
Sbjct: 240 SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLS 277

Length = 283

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 36.8 bits (86), Expect = 0.004
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGK 31
           MAPE          AD++S G   +E+ +GK
Sbjct: 170 MAPEVIRGEEYGRAADIWSLGCTVIEMATGK 200

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.85
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.77
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.76
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.76
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.72
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.69
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.69
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.66
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.64
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.63
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.62
PHA02988	283	hypothetical protein; Provisional	99.6
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.6
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.59
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.58
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.57
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.57
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.55
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.51
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.49
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.49
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.49
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.48
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.48
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.48
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.48
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.47
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.47
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.46
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.46
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.46
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.46
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.46
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.45
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.45
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.45
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.45
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.45
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.45
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.44
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.44
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.44
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.44
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.44
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.43
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.43
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.43
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.43
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.43
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.43
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.43
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.43
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.42
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.42
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.42
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.42
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.42
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.42
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.42
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.41
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.41
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.41
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.41
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.41
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.41
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.41
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.4
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.4
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.4
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.4
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.4
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.4
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.4
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.4
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.4
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.39
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.39
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.39
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.39
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.39
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.39
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.38
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.38
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.38
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.38
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.38
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.38
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.37
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.37
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.37
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.37
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.36
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.36
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.36
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.36
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.36
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.36
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.36
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.36
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.35
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.35
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.35
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.35
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.34
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.34
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.34
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.33
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.33
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.33
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.33
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.32
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.32
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.32
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.32
PHA02882	294	putative serine/threonine kinase; Provisional	99.32
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.32
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.32
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.32
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.32
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.31
PTZ00283	496	serine/threonine protein kinase; Provisional	99.31
KOG0578	550	consensus p21-activated serine/threonine protein k	99.3
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.3
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.3
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.3
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.3
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.29
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.29
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.29
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.29
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.29
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.28
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.28
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.28
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.27
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.27
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.26
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.26
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.26
KOG0198	313	consensus MEKK and related serine/threonine protei	99.26
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.26
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.26
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.25
PTZ00267	478	NIMA-related protein kinase; Provisional	99.25
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.25
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.25
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.24
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.24
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.24
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.24
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.24
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.23
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.23
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.23
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.23
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.23
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.23
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.23
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.23
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.23
PTZ00284	467	protein kinase; Provisional	99.22
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.22
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.22
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.22
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.21
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.21
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.21
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.21
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.21
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.21
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.21
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.2
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.2
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.2
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.2
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.2
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.2
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.19
PTZ00036	440	glycogen synthase kinase; Provisional	99.19
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.19
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.19
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.19
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.19
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.19
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.18
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.18
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.18
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.18
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.18
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.18
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.18
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.18
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.18
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.18
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.18
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.18
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.18
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.18
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.17
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.17
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.17
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.17
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.16
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.16
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.16
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.16
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.16
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.16
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.15
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.15
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.15
PHA03209	357	serine/threonine kinase US3; Provisional	99.15
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.15
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.15
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.15
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.15
PHA03207	392	serine/threonine kinase US3; Provisional	99.15
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.15
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.14
PLN00181	793	protein SPA1-RELATED; Provisional	99.14
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.14
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.14
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.13
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.13
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.13
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.13
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.13
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.13
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.13
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.13
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.13
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.13
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.12
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.12
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.12
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.12
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.12
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.12
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.12
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.11
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.11
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.11
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.11
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.11
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.11
PHA03212	391	serine/threonine kinase US3; Provisional	99.11
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.1
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.1
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.1
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.1
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.1
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.1
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.09
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.09
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.09
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.09
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.09
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.09
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.09
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.08
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.08
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.08
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.08
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.08
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.07
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.07
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.07
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.07
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.06
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.06
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.06
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.06
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.06
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.05
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.05
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.05
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.05
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.05
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.05
PHA03211	461	serine/threonine kinase US3; Provisional	99.04
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.04
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.04
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.04
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.04
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.04
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.03
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.03
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.03
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.03
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.03
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.03
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.02
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.01
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.01
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.01
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.01
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.01
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.0
KOG0584	632	consensus Serine/threonine protein kinase [General	99.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.99
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.99
PLN00009	294	cyclin-dependent kinase A; Provisional	98.99
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.99
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.98
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.98
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.97
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.97
KOG0589	426	consensus Serine/threonine protein kinase [General	98.97
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.94
KOG0575	592	consensus Polo-like serine/threonine protein kinas	98.94
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.93
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.93
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.93
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	98.91
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.91
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.9
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.9
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.89
PHA03210	501	serine/threonine kinase US3; Provisional	98.89
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.88
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.87
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	98.86
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.86
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.85
KOG0610	459	consensus Putative serine/threonine protein kinase	98.85
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.85
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.84
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.84
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.84
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.84
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.84
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.84
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	98.83
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.83
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.82
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.82
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.8
KOG0598	357	consensus Ribosomal protein S6 kinase and related	98.79
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.76
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.76
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.75
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	98.75
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	98.73
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.73
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.73
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.72
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.72
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.71
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.71
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.71
KOG0605	550	consensus NDR and related serine/threonine kinases	98.7
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.7
KOG0595	429	consensus Serine/threonine-protein kinase involved	98.7
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.68
KOG3653	534	consensus Transforming growth factor beta/activin	98.64
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.64
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.59
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	98.56
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.53
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	98.48
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.47
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.46
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.45
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.43
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.41
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	98.39
KOG0696	683	consensus Serine/threonine protein kinase [Signal	98.37
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	98.31
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.31
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	98.24
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	98.23
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.08
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.06
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	98.01
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	97.92
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	97.91
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	97.86
KOG4171	671	consensus Adenylate/guanylate kinase [Nucleotide t	97.86
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	97.82
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	97.79
KOG0586	596	consensus Serine/threonine protein kinase [General	97.77
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	97.72
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	97.67
KOG0611	668	consensus Predicted serine/threonine protein kinas	97.66
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	97.64
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.62
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	97.61
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.59
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.42
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	97.34
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.33
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	97.29
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	97.19
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.15
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.07
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.02
KOG1167	418	consensus Serine/threonine protein kinase of the C	96.9
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	96.61
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	96.2
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.09
COG0515	384	SPS1 Serine/threonine protein kinase [General func	95.83
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	95.58
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	94.07
KOG1266	458	consensus Protein kinase [Signal transduction mech	93.82
KOG3618	1318	consensus Adenylyl cyclase [General function predi	93.31
KOG0606	1205	consensus Microtubule-associated serine/threonine	91.89
KOG2137	700	consensus Protein kinase [Signal transduction mech	91.63
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	88.93
KOG3619	867	consensus Adenylate/guanylate cyclase [Energy prod	88.92
KOG1093	725	consensus Predicted protein kinase (contains TBC a	87.02
KOG0590	601	consensus Checkpoint kinase and related serine/thr	81.05

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.85  E-value=7.2e-23  Score=175.27  Aligned_cols=175  Identities=18%  Similarity=0.179  Sum_probs=121.6

Q ss_pred             CcccccccC-------CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHH
Q 028061            1 MAPEYALWG-------YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKV   73 (214)
Q Consensus         1 mAPE~~~~~-------~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (214)
                      .|||.++..       ..+.++|||||||+++|+++++.||.........  .+.+.....  .-....+|.+....  +
T Consensus       118 ~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~--~eii~~~~~--~~~~~~rP~i~~~~--e  191 (484)
T KOG1023|consen  118 TAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP--DEIILRVKK--GGSNPFRPSIELLN--E  191 (484)
T ss_pred             cCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCCh--HHHHHHHHh--cCCCCcCcchhhhh--h
Confidence            478988752       2688899999999999999999999754332221  222222211  01122222221111  3


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcCCC----------------------CCCCCCCCCCCccccchhhcccC
Q 028061           74 EAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSN----------------------IPDVIPEAGGLSEDLRFKTLRDH  131 (214)
Q Consensus        74 ~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~  131 (214)
                      ....+..++.+||..+|..||++.+|...++....                      ++..+.+++....+++.+....+
T Consensus       192 ~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~~~~~nl~D~m~~~le~Y~~nLe~~v~eRt~~l~~e~~k~d~LL  271 (484)
T KOG1023|consen  192 LPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGGSSKGNLMDSLFRMLESYADNLEKLVDERTAELEEEKKKTDTLL  271 (484)
T ss_pred             cchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccccccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            33478999999999999999999999877665332                      34444444544445555555555


Q ss_pred             cccc----------------CCCCCCCCccccccCCccCCCCCCccchhccChhHHHHHHHhhccc
Q 028061          132 PREM----------------NSSGLEGSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDSH  181 (214)
Q Consensus       132 ~~~~----------------~~~~~~~~~~s~~~~~~~~~~~ss~~~~~~~~~~~y~~~d~~~d~~  181 (214)
                      .+.+                ..+...+++|+|++|||.+++.++|.+||+++||+|+.||.||+.|
T Consensus       272 ~~mLP~~VA~~lk~G~~v~pe~~~~vti~fsDiv~fT~l~~~~~P~~vv~~lNdlyt~Fd~ii~~~  337 (484)
T KOG1023|consen  272 GQMLPKSVAESLKLGKTVDPESFDSVTIYFSDIVGFTVLSSNSTPIQVVTLLNDLYTTFDRIIDKH  337 (484)
T ss_pred             HHhcCHHHhhHhhcCCcCCccccCceeeeeHHHHHHHHHHhcCCCceeeeeccchHHhhhhccccc
Confidence            5544                4445555899999999999999999999999999999999999998

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=1.1e-18  Score=146.93  Aligned_cols=108  Identities=44%  Similarity=0.694  Sum_probs=95.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccC-CCCCH-HHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLG-SEFNK-VEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~   78 (214)
                      +||||+..+.++.|+|||||||+|+|+++|+.+.+.........+.+|++.....+.+.+++|+++. ...+. .+...+
T Consensus       245 ~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~  324 (361)
T KOG1187|consen  245 LAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKL  324 (361)
T ss_pred             CChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHH
Confidence            6899999999999999999999999999999998866655566699999999999999999999986 56664 688889


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      ..++.+|++.+|..||+|.+|+++|+....
T Consensus       325 ~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  325 AELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            999999999999999999999999965443

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.76  E-value=1.3e-19  Score=153.29  Aligned_cols=91  Identities=23%  Similarity=0.375  Sum_probs=78.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      .|||.+..++++.|+|||||||+||||+| |+.||....                ...+.+.+..+.+.+.|..|+..++
T Consensus       371 tAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms----------------n~ev~~~le~GyRlp~P~~CP~~vY  434 (468)
T KOG0197|consen  371 TAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS----------------NEEVLELLERGYRLPRPEGCPDEVY  434 (468)
T ss_pred             cCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC----------------HHHHHHHHhccCcCCCCCCCCHHHH
Confidence            59999999999999999999999999999 888885322                2225566777888888888999999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      ++|..||+.+|++||||..+...|+...
T Consensus       435 ~lM~~CW~~~P~~RPtF~~L~~~l~~~~  462 (468)
T KOG0197|consen  435 ELMKSCWHEDPEDRPTFETLREVLEDFF  462 (468)
T ss_pred             HHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence            9999999999999999999988887653

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.76  E-value=2.3e-19  Score=158.91  Aligned_cols=92  Identities=30%  Similarity=0.459  Sum_probs=77.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      |+||.+..++||.++||||||||||||++ |+-||......+                +.+.++.+-..++|..|+.+++
T Consensus       672 MppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E----------------VIe~i~~g~lL~~Pe~CP~~vY  735 (774)
T KOG1026|consen  672 MPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE----------------VIECIRAGQLLSCPENCPTEVY  735 (774)
T ss_pred             CCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH----------------HHHHHHcCCcccCCCCCCHHHH
Confidence            89999999999999999999999999998 988986443332                3344444444577888999999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .||..||+.+|.+||+|++|...|+....
T Consensus       736 ~LM~~CW~~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  736 SLMLECWNENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             HHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999997544

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.72  E-value=3.6e-18  Score=143.29  Aligned_cols=93  Identities=31%  Similarity=0.363  Sum_probs=72.4

Q ss_pred             Ccccccc--cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYAL--WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~--~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||+++  ...|+.|+|||||||++|||++|+.||......      ..+         ..++....++..+..++..+
T Consensus       211 MAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~------~~~---------~~v~~~~~Rp~~p~~~~~~l  275 (362)
T KOG0192|consen  211 MAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV------QVA---------SAVVVGGLRPPIPKECPPHL  275 (362)
T ss_pred             cChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH------HHH---------HHHHhcCCCCCCCccCCHHH
Confidence            8999999  669999999999999999999999999643321      111         12222333344455577799


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      ..++.+||+.+|..||+|.+++..|+....
T Consensus       276 ~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  276 SSLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             HHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence            999999999999999999999999986533

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.69  E-value=1.8e-17  Score=141.86  Aligned_cols=89  Identities=25%  Similarity=0.334  Sum_probs=73.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||+++....++|.||||||||||||+||..||.....               ...+..+-...+..+.|..|++.+.-
T Consensus       278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds---------------sAIIwGVGsNsL~LpvPstcP~Gfkl  342 (904)
T KOG4721|consen  278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS---------------SAIIWGVGSNSLHLPVPSTCPDGFKL  342 (904)
T ss_pred             hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch---------------heeEEeccCCcccccCcccCchHHHH
Confidence            899999999999999999999999999999999953211               11233344455556778888999999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHh
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      |+++||+..|..||+|++|+..|+
T Consensus       343 L~Kqcw~sKpRNRPSFrqil~Hld  366 (904)
T KOG4721|consen  343 LLKQCWNSKPRNRPSFRQILLHLD  366 (904)
T ss_pred             HHHHHHhcCCCCCccHHHHHHHHh
Confidence            999999999999999999987765

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.69  E-value=9e-18  Score=153.50  Aligned_cols=91  Identities=27%  Similarity=0.385  Sum_probs=72.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCcccc-ccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLME-FVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||.++.+.||.|+|||||||+||||++ |..||......+                +.. ++..+ +.+.|..|+..+
T Consensus       871 m~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~----------------v~~~~~~gg-RL~~P~~CP~~l  933 (1025)
T KOG1095|consen  871 MPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE----------------VLLDVLEGG-RLDPPSYCPEKL  933 (1025)
T ss_pred             CCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH----------------HHHHHHhCC-ccCCCCCCChHH
Confidence            89999999999999999999999999999 888986433221                111 22222 345577788899


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      +++|.+||+.+|++||+|..|++.+....+
T Consensus       934 y~lM~~CW~~~pe~RP~F~~i~~q~~~i~~  963 (1025)
T KOG1095|consen  934 YQLMLQCWKHDPEDRPSFRTIVEQDPAISN  963 (1025)
T ss_pred             HHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence            999999999999999999999997776543

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.66  E-value=7.2e-18  Score=148.37  Aligned_cols=95  Identities=21%  Similarity=0.342  Sum_probs=81.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      .|||.+...++|.++||||||||+||+++ |++||.....                ..+.+.+..+++.+.|.+|+..++
T Consensus       801 TAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN----------------QdVIkaIe~gyRLPpPmDCP~aL~  864 (996)
T KOG0196|consen  801 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN----------------QDVIKAIEQGYRLPPPMDCPAALY  864 (996)
T ss_pred             cChhHhhhcccCchhhccccceEEEEecccCCCcccccch----------------HHHHHHHHhccCCCCCCCCcHHHH
Confidence            48999999999999999999999999998 9999954332                235566667777778889999999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCCCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSNIPD  111 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~~~  111 (214)
                      +||+.||++|-.+||.|.||+..|.++..-+.
T Consensus       865 qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~  896 (996)
T KOG0196|consen  865 QLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN  896 (996)
T ss_pred             HHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence            99999999999999999999999998655443

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.64  E-value=8.6e-17  Score=144.04  Aligned_cols=90  Identities=33%  Similarity=0.491  Sum_probs=74.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||.+....|+.|+|||||||+||||++ |..||......               ..+.+.+.++.+.+.|..|..+++
T Consensus       488 mApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~---------------~~l~~~l~~G~r~~~P~~c~~eiY  552 (609)
T KOG0200|consen  488 MAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT---------------EELLEFLKEGNRMEQPEHCSDEIY  552 (609)
T ss_pred             cCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH---------------HHHHHHHhcCCCCCCCCCCCHHHH
Confidence            89999999999999999999999999998 88888531110               112334556666677777888999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      .+|+.||+.+|++||+|.+++..|+.
T Consensus       553 ~iM~~CW~~~p~~RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  553 DLMKSCWNADPEDRPTFSECVEFFEK  578 (609)
T ss_pred             HHHHHHhCCCcccCCCHHHHHHHHHH
Confidence            99999999999999999999999887

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.63  E-value=1.3e-16  Score=137.87  Aligned_cols=90  Identities=23%  Similarity=0.364  Sum_probs=75.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      .|||.+....++.|+|||+|||+||||.| |-.||....                ..++..++.++++...|..|+..++
T Consensus       433 TAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid----------------lSqVY~LLEkgyRM~~PeGCPpkVY  496 (1157)
T KOG4278|consen  433 TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID----------------LSQVYGLLEKGYRMDGPEGCPPKVY  496 (1157)
T ss_pred             cCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc----------------HHHHHHHHhccccccCCCCCCHHHH
Confidence            48999999999999999999999999998 888885321                1124556666777777778888999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +||+.||++.|.+||+|.++.+.++.+
T Consensus       497 eLMraCW~WsPsDRPsFaeiHqafEtm  523 (1157)
T KOG4278|consen  497 ELMRACWNWSPSDRPSFAEIHQAFETM  523 (1157)
T ss_pred             HHHHHHhcCCcccCccHHHHHHHHHHH
Confidence            999999999999999999999888763

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.62  E-value=1.7e-16  Score=130.77  Aligned_cols=89  Identities=20%  Similarity=0.281  Sum_probs=73.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      |+||.+.+..|+..+|||||||+|||+++ |+.||....+.+                +...+.++.+-..|-.|+.+++
T Consensus       465 MslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE----------------m~~ylkdGyRlaQP~NCPDeLf  528 (563)
T KOG1024|consen  465 MSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE----------------MEHYLKDGYRLAQPFNCPDELF  528 (563)
T ss_pred             cCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH----------------HHHHHhccceecCCCCCcHHHH
Confidence            78999999999999999999999999998 999985433322                2334445555556777888999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      .+|..||+..|++||+|+|++.-|..
T Consensus       529 ~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  529 TVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             HHHHHHHhcCcccCCCHHHHHHHHHH
Confidence            99999999999999999999887764

>PHA02988 hypothetical protein; Provisional

Probab=99.60  E-value=5.6e-16  Score=126.49  Aligned_cols=91  Identities=22%  Similarity=0.242  Sum_probs=66.3

Q ss_pred             Cccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~--~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||++.+  ..++.++|||||||++|||++|+.||......      +.. ..        ++........+..++..+
T Consensus       187 ~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~------~~~-~~--------i~~~~~~~~~~~~~~~~l  251 (283)
T PHA02988        187 FSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK------EIY-DL--------IINKNNSLKLPLDCPLEI  251 (283)
T ss_pred             cCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH------HHH-HH--------HHhcCCCCCCCCcCcHHH
Confidence            68999875  68999999999999999999999999643211      111 11        111111112222355689


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      .+++.+||+.+|++||++.+|+..|+..
T Consensus       252 ~~li~~cl~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        252 KCIVEACTSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             HHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            9999999999999999999999998854

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.60  E-value=4.8e-16  Score=135.80  Aligned_cols=85  Identities=22%  Similarity=0.283  Sum_probs=72.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      .|||.++.++|+.++|||+|||.+|||++ |+.|+.....                ..+.+.+|.+.+.+.+..|+++++
T Consensus       282 CaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g----------------~qIL~~iD~~erLpRPk~csedIY  345 (1039)
T KOG0199|consen  282 CAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG----------------IQILKNIDAGERLPRPKYCSEDIY  345 (1039)
T ss_pred             cCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH----------------HHHHHhccccccCCCCCCChHHHH
Confidence            48999999999999999999999999998 8888853322                125566777777777888999999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++|+.||..+|++||+|..|..
T Consensus       346 ~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  346 QIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             HHHHHhccCCccccccHHHHHH
Confidence            9999999999999999999974

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.59  E-value=3.1e-15  Score=113.34  Aligned_cols=96  Identities=20%  Similarity=0.219  Sum_probs=64.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHH--HH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAE--RM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~   78 (214)
                      ||||++.+..++.++|||||||++||+++|+.||.......  .........     ... ..+.. ...+.....  .+
T Consensus        71 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~-----~~~-~~~~~-~~~~~~~~~~~~~  141 (176)
T smart00750       71 MAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS--AILEILLNG-----MPA-DDPRD-RSNLESVSAARSF  141 (176)
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc--HHHHHHHHH-----hcc-CCccc-cccHHHHHhhhhH
Confidence            79999999999999999999999999999999985322110  000000000     000 00000 011222222  58


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      .+++.+||+.+|++||++.+++..+..
T Consensus       142 ~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      142 ADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             HHHHHHHHhcccccccCHHHHHHHHHH
Confidence            999999999999999999999987754

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.58  E-value=4.7e-15  Score=139.48  Aligned_cols=107  Identities=28%  Similarity=0.471  Sum_probs=81.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCC--CCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGS--EFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   78 (214)
                      ||||++.+..++.|+|||||||++||+++|+.|++.... .......|+............+++.+..  ..+.....++
T Consensus       845 ~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  923 (968)
T PLN00113        845 VAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEV  923 (968)
T ss_pred             cCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHH
Confidence            799999999999999999999999999999999854322 2334556665444344444555655532  3345566788


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .+++.+||+.+|++||+|.+|++.|++...
T Consensus       924 ~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        924 MNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            999999999999999999999999997644

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.57  E-value=2.5e-15  Score=130.04  Aligned_cols=90  Identities=24%  Similarity=0.350  Sum_probs=77.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||.+...++|.++|||-|||++|||+. |..||....                +..+.-.+..+-+.++|+.|+..++
T Consensus       559 maPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk----------------NsDVI~~iEnGeRlP~P~nCPp~LY  622 (974)
T KOG4257|consen  559 MAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK----------------NSDVIGHIENGERLPCPPNCPPALY  622 (974)
T ss_pred             cCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc----------------ccceEEEecCCCCCCCCCCCChHHH
Confidence            89999999999999999999999999987 999996332                3335555666667788889999999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      .||.+||+.+|.+||.|.+++..|...
T Consensus       623 slmskcWayeP~kRPrftei~~~lsdv  649 (974)
T KOG4257|consen  623 SLMSKCWAYEPSKRPRFTEIKAILSDV  649 (974)
T ss_pred             HHHHHHhccCcccCCcHHHHHHHHHHH
Confidence            999999999999999999998887754

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.57  E-value=2.4e-15  Score=122.03  Aligned_cols=89  Identities=28%  Similarity=0.470  Sum_probs=67.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||+++|+++ |..||......      +          +...+..+.....+..++..+.
T Consensus       193 ~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~------~----------~~~~i~~~~~~~~~~~~~~~~~  256 (283)
T cd05048         193 MPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ------E----------VIEMIRSRQLLPCPEDCPARVY  256 (283)
T ss_pred             cCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH------H----------HHHHHHcCCcCCCcccCCHHHH
Confidence            68999988899999999999999999998 88888532211      1          1111111111223344566899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +|+.+||+.+|.+||++.+|+..|++
T Consensus       257 ~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         257 ALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHhc
Confidence            99999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.55  E-value=6.5e-16  Score=124.37  Aligned_cols=87  Identities=29%  Similarity=0.397  Sum_probs=59.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||+++|||++ |+.|+....      ..+..... ..+         .....+..++..+.
T Consensus       172 ~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~------~~~~~~~~-~~~---------~~~~~~~~~~~~~~  235 (259)
T PF07714_consen  172 LAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD------NEEIIEKL-KQG---------QRLPIPDNCPKDIY  235 (259)
T ss_dssp             S-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC------HHHHHHHH-HTT---------EETTSBTTSBHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccc------cccccccc-ccc---------ccceeccchhHHHH
Confidence            58999999999999999999999999999 677774321      11111111 111         11122233455799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVSML  103 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L  103 (214)
                      .++.+||+.+|++||+|.+|++.|
T Consensus       236 ~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  236 SLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHhcC
Confidence            999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.51  E-value=1.1e-14  Score=121.40  Aligned_cols=91  Identities=31%  Similarity=0.389  Sum_probs=65.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++|||||||+++|+++ |..||.......      ........+.         ....+...+..+.
T Consensus       243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~------~~~~~~~~~~---------~~~~~~~~~~~l~  307 (338)
T cd05102         243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE------EFCQRLKDGT---------RMRAPENATPEIY  307 (338)
T ss_pred             cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH------HHHHHHhcCC---------CCCCCCCCCHHHH
Confidence            68999988899999999999999999997 888985422111      0111111111         0111223345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      .++.+||+.+|++||++.+|++.|+..
T Consensus       308 ~li~~cl~~dp~~RPs~~el~~~l~~~  334 (338)
T cd05102         308 RIMLACWQGDPKERPTFSALVEILGDL  334 (338)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.49  E-value=2.1e-14  Score=115.80  Aligned_cols=90  Identities=22%  Similarity=0.313  Sum_probs=65.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++|||||||+++|+++ |+.||......      +.. .....         ......+..++..+.
T Consensus       175 ~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~------~~~-~~~~~---------~~~~~~~~~~~~~~~  238 (266)
T cd05064         175 AAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ------DVI-KAVED---------GFRLPAPRNCPNLLH  238 (266)
T ss_pred             cCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH------HHH-HHHHC---------CCCCCCCCCCCHHHH
Confidence            68999988999999999999999999875 99998533211      100 11111         111122333556799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.+|.+.|++.
T Consensus       239 ~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         239 QLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.49  E-value=2.1e-14  Score=115.10  Aligned_cols=89  Identities=24%  Similarity=0.288  Sum_probs=65.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||.+..+.++.++||||||++++|+++ |..||......      .+...          +........+..++..+.
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~~~~~----------i~~~~~~~~~~~~~~~l~  228 (257)
T cd05116         165 YAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN------EVTQM----------IESGERMECPQRCPPEMY  228 (257)
T ss_pred             cCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHH----------HHCCCCCCCCCCCCHHHH
Confidence            58998888889999999999999999998 88898532211      11111          111111122233445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.+|...|++
T Consensus       229 ~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         229 DLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HHHHHHhccCchhCcCHHHHHHHHhc
Confidence            99999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.49  E-value=3.4e-14  Score=122.48  Aligned_cols=96  Identities=26%  Similarity=0.390  Sum_probs=69.4

Q ss_pred             Cccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALW---GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~---~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      ||||+++.   ..|+..+|||+||||+|||++|..||... ..+.      +..+...|.+    .+++ ......|+++
T Consensus       557 mAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~-~~dq------IifmVGrG~l----~pd~-s~~~s~~pk~  624 (678)
T KOG0193|consen  557 MAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ-NRDQ------IIFMVGRGYL----MPDL-SKIRSNCPKA  624 (678)
T ss_pred             hcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC-Chhh------eEEEeccccc----Cccc-hhhhccCHHH
Confidence            89999983   58999999999999999999999999722 2111      0011111111    1111 1223457779


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      |.+|+..||..++++||.|.+|+..|+....
T Consensus       625 mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  625 MKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             HHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            9999999999999999999999998876544

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.48  E-value=2.6e-14  Score=115.86  Aligned_cols=88  Identities=28%  Similarity=0.365  Sum_probs=64.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||+++|+++ |..||.......   ..    .         .+........+...+..+.
T Consensus       188 ~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~---~~----~---------~~~~~~~~~~~~~~~~~~~  251 (277)
T cd05036         188 MPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE---VM----E---------FVTGGGRLDPPKGCPGPVY  251 (277)
T ss_pred             CCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----H---------HHHcCCcCCCCCCCCHHHH
Confidence            68999988899999999999999999997 888885322111   11    1         1111111122233445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      +++.+||+.+|++||++.+|++.|+
T Consensus       252 ~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         252 RIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHhh
Confidence            9999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.48  E-value=4.8e-14  Score=117.50  Aligned_cols=85  Identities=21%  Similarity=0.362  Sum_probs=66.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||+++...|+.|+||||+||..+||.+|.+|+....+..                +.-++.+...+.........+.+
T Consensus       178 MAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr----------------vlflIpk~~PP~L~~~~S~~~kE  241 (467)
T KOG0201|consen  178 MAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR----------------VLFLIPKSAPPRLDGDFSPPFKE  241 (467)
T ss_pred             cchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce----------------EEEeccCCCCCccccccCHHHHH
Confidence            89999998899999999999999999999999997443321                22333333333333345568999


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++..|++.+|+.||++.++++
T Consensus       242 FV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  242 FVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             HHHHHhhcCcccCcCHHHHhh
Confidence            999999999999999999874

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.48  E-value=3.2e-14  Score=115.17  Aligned_cols=89  Identities=25%  Similarity=0.374  Sum_probs=64.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||++++|+++ |..||.......   ..    .....+.         ....+...+..+.
T Consensus       191 ~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~---~~----~~~~~~~---------~~~~~~~~~~~~~  254 (280)
T cd05049         191 MPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE---VI----ECITQGR---------LLQRPRTCPSEVY  254 (280)
T ss_pred             cChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HH----HHHHcCC---------cCCCCCCCCHHHH
Confidence            68999999999999999999999999998 998875322111   11    1111111         1111223445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.+|++.|++
T Consensus       255 ~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         255 DIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHHhhC
Confidence            99999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.48  E-value=3.1e-14  Score=115.72  Aligned_cols=105  Identities=18%  Similarity=0.235  Sum_probs=68.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.|+....... ...............+.+.++.....+.+...+..+.+
T Consensus       177 ~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (283)
T cd05080         177 YAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYI  255 (283)
T ss_pred             eCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHH
Confidence            58999888889999999999999999999999875322110 00000000000001111122222222223334568999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++.+||+.+|++||++.+|+..|+.+
T Consensus       256 li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         256 LMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             HHHHHhccChhhCCCHHHHHHHHHHh
Confidence            99999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.47  E-value=3.6e-14  Score=114.11  Aligned_cols=89  Identities=24%  Similarity=0.328  Sum_probs=64.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |..|+.....      .+.. ...         ........+...+..+.
T Consensus       172 ~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~------~~~~-~~~---------~~~~~~~~~~~~~~~~~  235 (263)
T cd05052         172 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL------SQVY-ELL---------EKGYRMERPEGCPPKVY  235 (263)
T ss_pred             CCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH------HHHH-HHH---------HCCCCCCCCCCCCHHHH
Confidence            58999988899999999999999999998 8888753211      1111 111         11111122223445799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.++++.|+.
T Consensus       236 ~li~~cl~~~p~~Rp~~~~l~~~l~~  261 (263)
T cd05052         236 ELMRACWQWNPSDRPSFAEIHQAFET  261 (263)
T ss_pred             HHHHHHccCCcccCCCHHHHHHHHHh
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.47  E-value=2.9e-14  Score=116.48  Aligned_cols=92  Identities=26%  Similarity=0.434  Sum_probs=67.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++||||||++++|+++ |+.||.......       .......+..         ...+..++..+.
T Consensus       192 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-------~~~~~~~~~~---------~~~~~~~~~~~~  255 (291)
T cd05094         192 MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-------VIECITQGRV---------LERPRVCPKEVY  255 (291)
T ss_pred             cChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHhCCCC---------CCCCccCCHHHH
Confidence            68999988899999999999999999998 998875322111       0111111111         111222345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      +++.+||+.+|.+||++.+|++.|+....
T Consensus       256 ~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         256 DIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             HHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999987644

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.46  E-value=3.9e-14  Score=115.11  Aligned_cols=91  Identities=23%  Similarity=0.328  Sum_probs=65.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||++||+++ |+.||.......   .    ......+         .....+..+...+.
T Consensus       178 ~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~----~~~~~~~---------~~~~~~~~~~~~~~  241 (279)
T cd05111         178 MALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---V----PDLLEKG---------ERLAQPQICTIDVY  241 (279)
T ss_pred             cCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---H----HHHHHCC---------CcCCCCCCCCHHHH
Confidence            58999988899999999999999999998 888885332110   0    1111111         11111112344678


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      .++.+||..+|.+||++.+++..|+.+.
T Consensus       242 ~li~~c~~~~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         242 MVMVKCWMIDENVRPTFKELANEFTRMA  269 (279)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            8999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.46  E-value=3.2e-14  Score=120.72  Aligned_cols=91  Identities=25%  Similarity=0.400  Sum_probs=65.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||+++|+++ |+.||.......      .....         +........+...+..+.
T Consensus       281 ~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~------~~~~~---------~~~~~~~~~~~~~~~~l~  345 (374)
T cd05106         281 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS------KFYKM---------VKRGYQMSRPDFAPPEIY  345 (374)
T ss_pred             eCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH------HHHHH---------HHcccCccCCCCCCHHHH
Confidence            68999988899999999999999999997 999985432111      00111         111111111112235789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.+|++.|++.
T Consensus       346 ~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         346 SIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.46  E-value=4.7e-14  Score=114.52  Aligned_cols=89  Identities=25%  Similarity=0.353  Sum_probs=64.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||.+..+.++.++||||||++++|+++ |..|+.....      .++....         .+. .....+..++..+.
T Consensus       193 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~~~~~~i---------~~~-~~~~~~~~~~~~~~  256 (283)
T cd05091         193 MSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------QDVIEMI---------RNR-QVLPCPDDCPAWVY  256 (283)
T ss_pred             cCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHH---------HcC-CcCCCCCCCCHHHH
Confidence            68999988899999999999999999998 7777753211      1111111         111 11122334556789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      .++.+||+.+|++||++.+|+..|+.
T Consensus       257 ~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         257 TLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            99999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.46  E-value=5.5e-14  Score=113.19  Aligned_cols=90  Identities=21%  Similarity=0.335  Sum_probs=65.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++|||||||+++|+++ |+.||......      .......          .....+.+...+..+.
T Consensus       177 ~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~------~~~~~i~----------~~~~~~~~~~~~~~~~  240 (268)
T cd05063         177 TAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH------EVMKAIN----------DGFRLPAPMDCPSAVY  240 (268)
T ss_pred             cCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH------HHHHHHh----------cCCCCCCCCCCCHHHH
Confidence            58999888889999999999999999997 99998532211      1111110          1111112223455789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.+|+..|++.
T Consensus       241 ~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         241 QLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.46  E-value=5.6e-14  Score=112.52  Aligned_cols=90  Identities=28%  Similarity=0.369  Sum_probs=65.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||||++++|+++ |..||......   .+....    ...         .....+..++..+.
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~---~~~~~~----~~~---------~~~~~~~~~~~~l~  228 (257)
T cd05060         165 YAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---EVIAML----ESG---------ERLPRPEECPQEIY  228 (257)
T ss_pred             cCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHH----HcC---------CcCCCCCCCCHHHH
Confidence            58999988899999999999999999998 89998543211   111111    111         01112223345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||..+|++||++.+|+..|++.
T Consensus       229 ~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         229 SIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.45  E-value=3.9e-14  Score=120.15  Aligned_cols=90  Identities=27%  Similarity=0.448  Sum_probs=64.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++|||||||+++|+++ |..||.......      .....         +........+...+.++.
T Consensus       283 ~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~------~~~~~---------~~~~~~~~~~~~~~~~l~  347 (375)
T cd05104         283 MAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS------KFYKM---------IKEGYRMLSPECAPSEMY  347 (375)
T ss_pred             eChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH------HHHHH---------HHhCccCCCCCCCCHHHH
Confidence            68999998999999999999999999998 788875322111      01111         111111111122344789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.+|++.|++
T Consensus       348 ~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         348 DIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             HHHHHHccCChhHCcCHHHHHHHHHh
Confidence            99999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.45  E-value=7.1e-14  Score=111.87  Aligned_cols=87  Identities=23%  Similarity=0.361  Sum_probs=62.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |+.||......      +...... .+.  .       ...+......+.
T Consensus       168 ~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~------~~~~~i~-~~~--~-------~~~~~~~~~~~~  231 (256)
T cd05114         168 SPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY------EVVEMIS-RGF--R-------LYRPKLASMTVY  231 (256)
T ss_pred             CChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHH-CCC--C-------CCCCCCCCHHHH
Confidence            58999988889999999999999999999 88888532211      1111111 110  0       011112234789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVSML  103 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L  103 (214)
                      .++.+||+.+|++||++.+++..|
T Consensus       232 ~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         232 EVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHHHccCCcccCcCHHHHHHhh
Confidence            999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.45  E-value=1.4e-13  Score=110.69  Aligned_cols=93  Identities=15%  Similarity=0.230  Sum_probs=66.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++||||||+++||+++|+.||.....    ....+.....      ..   ...+.........+.+
T Consensus       173 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~~~~~~~~------~~---~~~~~~~~~~~~~~~~  239 (267)
T cd08228         173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLFSLCQKIE------QC---DYPPLPTEHYSEKLRE  239 (267)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc----cHHHHHHHHh------cC---CCCCCChhhcCHHHHH
Confidence            689999888899999999999999999999999853211    1111111110      00   1111112234467999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++.+||+.+|++||++.+|++.|+++
T Consensus       240 li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         240 LVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             HHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            99999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.45  E-value=5.6e-14  Score=113.92  Aligned_cols=91  Identities=23%  Similarity=0.329  Sum_probs=65.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++||||||+++||+++ |+.||.....      .++.... ..+         .....+..++..+.
T Consensus       186 ~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~~~~~~~-~~~---------~~~~~~~~~~~~~~  249 (280)
T cd05043         186 MALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP------FEMAAYL-KDG---------YRLAQPINCPDELF  249 (280)
T ss_pred             cCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH------HHHHHHH-HcC---------CCCCCCCcCCHHHH
Confidence            68999988889999999999999999998 9999853211      1111111 011         11111122345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||..+|++||++.+|+..|+...
T Consensus       250 ~li~~~l~~~p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         250 AVMACCWALDPEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            9999999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.45  E-value=1e-13  Score=111.55  Aligned_cols=88  Identities=28%  Similarity=0.438  Sum_probs=64.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++|||||||+++|+++ |+.||......      +....          +........+...+..+.
T Consensus       180 ~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~------~~~~~----------~~~~~~~~~~~~~~~~~~  243 (269)
T cd05044         180 MAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ------EVLQH----------VTAGGRLQKPENCPDKIY  243 (269)
T ss_pred             cCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH------HHHHH----------HhcCCccCCcccchHHHH
Confidence            58999999999999999999999999998 88888532111      10000          011111112223456789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      +++.+||..+|.+||++.+|++.|+
T Consensus       244 ~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         244 QLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHHHh
Confidence            9999999999999999999999886

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.45  E-value=6.3e-14  Score=114.34  Aligned_cols=90  Identities=31%  Similarity=0.417  Sum_probs=65.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |+.||......       ..+..         +........+......+.
T Consensus       196 ~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-------~~~~~---------~~~~~~~~~~~~~~~~~~  259 (290)
T cd05045         196 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE-------RLFNL---------LKTGYRMERPENCSEEMY  259 (290)
T ss_pred             cCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-------HHHHH---------HhCCCCCCCCCCCCHHHH
Confidence            58998888889999999999999999998 88888532211       11111         111111112223345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      .++.+||+.+|++||++.++++.|+++
T Consensus       260 ~~i~~cl~~~P~~Rp~~~~i~~~l~~~  286 (290)
T cd05045         260 NLMLTCWKQEPDKRPTFADISKELEKM  286 (290)
T ss_pred             HHHHHHccCCcccCCCHHHHHHHHHHH
Confidence            999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.44  E-value=6.9e-14  Score=112.30  Aligned_cols=89  Identities=19%  Similarity=0.280  Sum_probs=65.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |..||......      ..          ...+........+..++..+.
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~----------~~~~~~~~~~~~~~~~~~~l~  228 (257)
T cd05115         165 YAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP------EV----------MSFIEQGKRLDCPAECPPEMY  228 (257)
T ss_pred             CCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH------HH----------HHHHHCCCCCCCCCCCCHHHH
Confidence            58999888889999999999999999996 89888533211      11          111111111222333456889


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||..+|++||++.+|.+.|+.
T Consensus       229 ~li~~c~~~~~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         229 ALMKDCWIYKWEDRPNFAKVEERMRT  254 (257)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHhh
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.44  E-value=1e-13  Score=111.21  Aligned_cols=89  Identities=29%  Similarity=0.437  Sum_probs=64.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |+.||.......       ....         +........+...+..+.
T Consensus       171 ~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-------~~~~---------~~~~~~~~~~~~~~~~~~  234 (261)
T cd05068         171 TAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-------VLQQ---------VDQGYRMPCPPGCPKELY  234 (261)
T ss_pred             cCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHH---------HHcCCCCCCCCcCCHHHH
Confidence            58999988899999999999999999999 888885321110       0011         111111112223445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|.+||++.+|...|+.
T Consensus       235 ~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         235 DIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            99999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.44  E-value=7.6e-14  Score=116.75  Aligned_cols=91  Identities=31%  Similarity=0.364  Sum_probs=65.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+..++.++|||||||+++|+++ |..||......+      ........+         .....+......+.
T Consensus       242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~------~~~~~~~~~---------~~~~~~~~~~~~~~  306 (337)
T cd05054         242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE------EFCRRLKEG---------TRMRAPEYATPEIY  306 (337)
T ss_pred             cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH------HHHHHHhcc---------CCCCCCccCCHHHH
Confidence            68999999999999999999999999997 988885422111      000111111         11111222345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.+|++.|+..
T Consensus       307 ~l~~~cl~~~p~~RPs~~ell~~l~~~  333 (337)
T cd05054         307 SIMLDCWHNNPEDRPTFSELVEILGDL  333 (337)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.44  E-value=9.1e-14  Score=111.91  Aligned_cols=90  Identities=27%  Similarity=0.351  Sum_probs=64.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |..||......   ...+.   . ..+         .....+..+...+.
T Consensus       182 ~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~---~~~~~---~-~~~---------~~~~~~~~~~~~~~  245 (273)
T cd05035         182 IAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH---EIYDY---L-RHG---------NRLKQPEDCLDELY  245 (273)
T ss_pred             cCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH---H-HcC---------CCCCCCcCCCHHHH
Confidence            58999888889999999999999999998 77887532211   01111   1 011         11112233455899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|.+||++.+|++.|+..
T Consensus       246 ~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         246 DLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.44  E-value=9.3e-14  Score=111.42  Aligned_cols=89  Identities=31%  Similarity=0.417  Sum_probs=64.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||++++|+++ |+.||......      ...... ...     ...    +.....+..+.
T Consensus       171 ~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~------~~~~~~-~~~-----~~~----~~~~~~~~~~~  234 (261)
T cd05072         171 TAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS------DVMSAL-QRG-----YRM----PRMENCPDELY  234 (261)
T ss_pred             CCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH------HHHHHH-HcC-----CCC----CCCCCCCHHHH
Confidence            68999988889999999999999999998 88888532111      111111 111     000    11112345788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.++.+.|+.
T Consensus       235 ~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         235 DIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHhc
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.43  E-value=1e-13  Score=113.66  Aligned_cols=92  Identities=24%  Similarity=0.282  Sum_probs=66.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++|||||||+++||++ |..||......      +....          +........+......+.
T Consensus       185 ~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~------~~~~~----------~~~~~~~~~~~~~~~~~~  248 (297)
T cd05089         185 MAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA------ELYEK----------LPQGYRMEKPRNCDDEVY  248 (297)
T ss_pred             cCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHH----------HhcCCCCCCCCCCCHHHH
Confidence            68999888889999999999999999997 88888532211      11101          111111112223445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      +++.+||+.+|.+||++.+|+..|+.+.+
T Consensus       249 ~li~~~l~~~p~~Rp~~~~i~~~l~~~~~  277 (297)
T cd05089         249 ELMRQCWRDRPYERPPFAQISVQLSRMLE  277 (297)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            99999999999999999999998886544

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.43  E-value=1.1e-13  Score=110.54  Aligned_cols=88  Identities=23%  Similarity=0.388  Sum_probs=63.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||++++|+++ |..||.......       .         ...+........+...+..+.
T Consensus       163 ~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~  226 (252)
T cd05084         163 TAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-------T---------REAIEQGVRLPCPELCPDAVY  226 (252)
T ss_pred             cCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-------H---------HHHHHcCCCCCCcccCCHHHH
Confidence            58999988899999999999999999997 887775321110       0         011111111122233455789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      +++.+||+.+|++||++.+|.+.|+
T Consensus       227 ~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         227 RLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHh
Confidence            9999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.43  E-value=1e-13  Score=112.01  Aligned_cols=90  Identities=22%  Similarity=0.272  Sum_probs=64.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |..||......      +....          +........+......+.
T Consensus       178 ~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~------~~~~~----------~~~~~~~~~~~~~~~~~~  241 (270)
T cd05047         178 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------ELYEK----------LPQGYRLEKPLNCDDEVY  241 (270)
T ss_pred             CChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH------HHHHH----------HhCCCCCCCCCcCCHHHH
Confidence            58999888889999999999999999997 88888532111      10001          111111111222344789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|.+||++.+++..|+.+
T Consensus       242 ~li~~~l~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         242 DLMRQCWREKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             HHHHHHcccChhhCCCHHHHHHHHHHh
Confidence            999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.43  E-value=1.1e-13  Score=112.37  Aligned_cols=89  Identities=28%  Similarity=0.433  Sum_probs=64.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++.++.++.++||||||++++|+++ |..||......       .         +.+.++.......+..++..+.
T Consensus       193 ~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~~  256 (283)
T cd05090         193 MPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ-------E---------VIEMVRKRQLLPCSEDCPPRMY  256 (283)
T ss_pred             cChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-------H---------HHHHHHcCCcCCCCCCCCHHHH
Confidence            58999988889999999999999999998 88887532110       0         1111111111112223345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.+|.+.|++
T Consensus       257 ~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         257 SLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHcccCcccCcCHHHHHHHhhc
Confidence            99999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.43  E-value=1.1e-13  Score=112.51  Aligned_cols=89  Identities=25%  Similarity=0.341  Sum_probs=63.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++|||||||+++|+++ |..||.......      .....         . .......+..++..+.
T Consensus       191 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~---------~-~~~~~~~~~~~~~~~~  254 (280)
T cd05092         191 MPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE------AIECI---------T-QGRELERPRTCPPEVY  254 (280)
T ss_pred             cCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH------HHHHH---------H-cCccCCCCCCCCHHHH
Confidence            58999988899999999999999999998 888874322111      00000         0 0000111222345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|.+||++.+|...|++
T Consensus       255 ~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         255 AIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             HHHHHHccCChhhCCCHHHHHHHHhC
Confidence            99999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.43  E-value=9.6e-14  Score=113.23  Aligned_cols=91  Identities=24%  Similarity=0.441  Sum_probs=65.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |..||.......       .......+...         ..+...+..+.
T Consensus       189 ~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-------~~~~i~~~~~~---------~~~~~~~~~l~  252 (288)
T cd05093         189 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-------VIECITQGRVL---------QRPRTCPKEVY  252 (288)
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCCcC---------CCCCCCCHHHH
Confidence            68999988899999999999999999998 888875322110       00111111110         11112334789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||+.+|.+||++.+|...|+...
T Consensus       253 ~li~~~l~~~p~~Rpt~~~v~~~l~~~~  280 (288)
T cd05093         253 DLMLGCWQREPHMRLNIKEIHSLLQNLA  280 (288)
T ss_pred             HHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            9999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.43  E-value=1.4e-13  Score=110.45  Aligned_cols=90  Identities=30%  Similarity=0.375  Sum_probs=62.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSG-KNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++||||||++++|+++| ..||....      ......... .+         .....+...+..+.
T Consensus       169 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~------~~~~~~~~~-~~---------~~~~~~~~~~~~~~  232 (262)
T cd05058         169 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD------SFDITVYLL-QG---------RRLLQPEYCPDPLY  232 (262)
T ss_pred             cChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHh-cC---------CCCCCCCcCCHHHH
Confidence            689998888999999999999999999995 45553211      111111110 00         00111222345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.+|+..|+..
T Consensus       233 ~li~~cl~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         233 EVMLSCWHPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.43  E-value=9.2e-14  Score=114.93  Aligned_cols=92  Identities=21%  Similarity=0.294  Sum_probs=66.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++||||||+++||+++ |+.||......      .. ...         +........+..+...+.
T Consensus       178 ~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~------~~-~~~---------~~~~~~~~~~~~~~~~~~  241 (316)
T cd05108         178 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS------EI-SSI---------LEKGERLPQPPICTIDVY  241 (316)
T ss_pred             cChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH------HH-HHH---------HhCCCCCCCCCCCCHHHH
Confidence            68999988999999999999999999998 88888532111      10 011         111111111222445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .++.+||+.+|.+||++.+++..|.....
T Consensus       242 ~li~~cl~~~p~~Rps~~~l~~~l~~~~~  270 (316)
T cd05108         242 MIMVKCWMIDADSRPKFRELIIEFSKMAR  270 (316)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence            99999999999999999999999886543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.42  E-value=1.7e-13  Score=114.19  Aligned_cols=93  Identities=28%  Similarity=0.335  Sum_probs=66.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++||||||++++|+++ |..||.....      .+..... ..         ......+..++..+.
T Consensus       203 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~-~~---------~~~~~~~~~~~~~l~  266 (334)
T cd05100         203 MAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------EELFKLL-KE---------GHRMDKPANCTHELY  266 (334)
T ss_pred             cCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHH-Hc---------CCCCCCCCCCCHHHH
Confidence            68999988899999999999999999998 7777753211      1111111 11         111111223345788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      .++.+||+.+|++||++.+++..|+.....
T Consensus       267 ~li~~cl~~~p~~Rps~~ell~~l~~~~~~  296 (334)
T cd05100         267 MIMRECWHAVPSQRPTFKQLVEDLDRVLTV  296 (334)
T ss_pred             HHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence            999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.42  E-value=1.2e-13  Score=110.60  Aligned_cols=89  Identities=22%  Similarity=0.287  Sum_probs=64.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++||||||++++|+++ |+.||....      ..+.....          ........+..++..+.
T Consensus       166 ~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~------~~~~~~~~----------~~~~~~~~~~~~~~~~~  229 (256)
T cd05082         166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------LKDVVPRV----------EKGYKMDAPDGCPPVVY  229 (256)
T ss_pred             cCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHH----------hcCCCCCCCCCCCHHHH
Confidence            68999988889999999999999999997 888874221      11111111          01111112223445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.++++.|+.
T Consensus       230 ~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         230 DVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.42  E-value=1.4e-13  Score=110.29  Aligned_cols=89  Identities=26%  Similarity=0.406  Sum_probs=64.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+..+.++.++||||||++++|+++ |+.||.......   ...   ..          ........+..++..+.
T Consensus       171 ~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~---~~~---~~----------~~~~~~~~~~~~~~~~~  234 (261)
T cd05148         171 TAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE---VYD---QI----------TAGYRMPCPAKCPQEIY  234 (261)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH---HHH---HH----------HhCCcCCCCCCCCHHHH
Confidence            57999888889999999999999999998 788885322110   111   10          11111122233455789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.++.+.|+.
T Consensus       235 ~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         235 KIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            99999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.42  E-value=1.5e-13  Score=110.70  Aligned_cols=89  Identities=25%  Similarity=0.300  Sum_probs=63.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |+.||......      . .......+..         ...+......+.
T Consensus       181 ~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~-~~~~~~~~~~---------~~~~~~~~~~~~  244 (272)
T cd05075         181 IAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS------E-IYDYLRQGNR---------LKQPPDCLDGLY  244 (272)
T ss_pred             CCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH------H-HHHHHHcCCC---------CCCCCCCCHHHH
Confidence            57888888889999999999999999999 77887532111      0 1111111110         011222344689


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.+|++.|+.
T Consensus       245 ~li~~~l~~~p~~Rps~~~l~~~l~~  270 (272)
T cd05075         245 SLMSSCWLLNPKDRPSFETLRCELEK  270 (272)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.42  E-value=7.5e-14  Score=113.89  Aligned_cols=90  Identities=29%  Similarity=0.410  Sum_probs=65.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++|||||||++||+++ |..||.......       ....         +........+..+...+.
T Consensus       201 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-------~~~~---------~~~~~~~~~~~~~~~~~~  264 (293)
T cd05053         201 MAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-------LFKL---------LKEGYRMEKPQNCTQELY  264 (293)
T ss_pred             cCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH-------HHHH---------HHcCCcCCCCCCCCHHHH
Confidence            58999888899999999999999999997 888875322110       1111         111111122233455789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||..+|++||++.++++.|+..
T Consensus       265 ~li~~~l~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         265 HLMRDCWHEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             HHHHHHcccCcccCcCHHHHHHHHHHh
Confidence            999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.42  E-value=1.4e-13  Score=111.48  Aligned_cols=89  Identities=25%  Similarity=0.423  Sum_probs=63.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||+++|+++ |..||......      .. .........         ...+..++..+.
T Consensus       188 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~------~~-~~~~~~~~~---------~~~~~~~~~~~~  251 (277)
T cd05062         188 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE------QV-LRFVMEGGL---------LDKPDNCPDMLF  251 (277)
T ss_pred             cChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH------HH-HHHHHcCCc---------CCCCCCCCHHHH
Confidence            68999988889999999999999999998 67777532111      00 011101100         011222345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.+++..|++
T Consensus       252 ~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         252 ELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            99999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.42  E-value=1.9e-13  Score=109.70  Aligned_cols=89  Identities=28%  Similarity=0.428  Sum_probs=64.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |..||......      +.....          ......+.+...+..+.
T Consensus       170 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~------~~~~~~----------~~~~~~~~~~~~~~~~~  233 (260)
T cd05070         170 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR------EVLEQV----------ERGYRMPCPQDCPISLH  233 (260)
T ss_pred             cChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH------HHHHHH----------HcCCCCCCCCcCCHHHH
Confidence            68999888889999999999999999999 88888532111      111111          11111122233445799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||..+|++||++.++...|+.
T Consensus       234 ~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         234 ELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHcccCcccCcCHHHHHHHHhc
Confidence            99999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.41  E-value=1.6e-13  Score=109.20  Aligned_cols=88  Identities=23%  Similarity=0.325  Sum_probs=63.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||++++|+++ |..||......      . .......         ......+...+..+.
T Consensus       161 ~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~------~-~~~~~~~---------~~~~~~~~~~~~~~~  224 (250)
T cd05085         161 TAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ------Q-AREQVEK---------GYRMSCPQKCPDDVY  224 (250)
T ss_pred             cCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH------H-HHHHHHc---------CCCCCCCCCCCHHHH
Confidence            58999988899999999999999999998 88888532111      0 0011111         111111222345799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      +++.+||+.+|++||++.++.+.|.
T Consensus       225 ~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         225 KVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHcccCcccCCCHHHHHHHhc
Confidence            9999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.41  E-value=3.6e-13  Score=108.28  Aligned_cols=93  Identities=17%  Similarity=0.240  Sum_probs=65.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|..||......    .......      +.....+.   ..+......+..
T Consensus       173 ~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~------~~~~~~~~---~~~~~~~~~~~~  239 (267)
T cd08229         173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKK------IEQCDYPP---LPSDHYSEELRQ  239 (267)
T ss_pred             cCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch----HHHHhhh------hhcCCCCC---CCcccccHHHHH
Confidence            5899998888999999999999999999999998532111    0010000      01111111   111234557899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++.+||+.+|++||++.+|++.+++.
T Consensus       240 li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         240 LVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             HHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            99999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.41  E-value=1.7e-13  Score=112.82  Aligned_cols=90  Identities=27%  Similarity=0.446  Sum_probs=64.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+..+.++.++|||||||+++|+++ |..||.......      .....         +........+...+..+.
T Consensus       210 ~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~------~~~~~---------~~~~~~~~~~~~~~~~~~  274 (302)
T cd05055         210 MAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS------KFYKL---------IKEGYRMAQPEHAPAEIY  274 (302)
T ss_pred             CCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH------HHHHH---------HHcCCcCCCCCCCCHHHH
Confidence            68999988899999999999999999998 888875322111      00011         111111111112234789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.+|+..|++
T Consensus       275 ~li~~cl~~~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         275 DIMKTCWDADPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHh
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.41  E-value=1.8e-13  Score=111.41  Aligned_cols=89  Identities=24%  Similarity=0.402  Sum_probs=63.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++|||||||+++|+++ |..||.....      .+..... ..+..         ...+...+..+.
T Consensus       199 ~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~------~~~~~~~-~~~~~---------~~~~~~~~~~l~  262 (288)
T cd05050         199 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH------EEVIYYV-RDGNV---------LSCPDNCPLELY  262 (288)
T ss_pred             cCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHH-hcCCC---------CCCCCCCCHHHH
Confidence            58999888899999999999999999997 7777742211      1111111 11111         111222345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.+|++.|++
T Consensus       263 ~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         263 NLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHHHHcccCcccCCCHHHHHHHhhC
Confidence            99999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.41  E-value=1.8e-13  Score=109.56  Aligned_cols=87  Identities=25%  Similarity=0.362  Sum_probs=62.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |+.||.......      .....          ........+...+..+.
T Consensus       168 ~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~----------~~~~~~~~~~~~~~~~~  231 (256)
T cd05059         168 APPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE------VVESV----------SAGYRLYRPKLAPTEVY  231 (256)
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH------HHHHH----------HcCCcCCCCCCCCHHHH
Confidence            58999988899999999999999999998 788885322111      01111          00111111222455799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVSML  103 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L  103 (214)
                      +++.+||+.+|++||++.+|++.|
T Consensus       232 ~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         232 TIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHh
Confidence            999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.41  E-value=1.3e-13  Score=111.47  Aligned_cols=88  Identities=30%  Similarity=0.494  Sum_probs=63.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+..+.++.++|||||||+++|+++ |..||.......   ..    .....+.         ....+..++..+.
T Consensus       188 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~----~~~~~~~---------~~~~~~~~~~~~~  251 (277)
T cd05032         188 MAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE---VL----KFVIDGG---------HLDLPENCPDKLL  251 (277)
T ss_pred             cCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH---HH----HHHhcCC---------CCCCCCCCCHHHH
Confidence            58999988889999999999999999998 888875322111   11    1111110         1111222355889


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      +++.+||+.+|++||++.+++..|+
T Consensus       252 ~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         252 ELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHhc
Confidence            9999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.41  E-value=1.6e-13  Score=117.42  Aligned_cols=91  Identities=22%  Similarity=0.327  Sum_probs=65.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+..++.++|||||||+++|+++ |..||.......      ....         .+........+..++..+.
T Consensus       306 ~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~------~~~~---------~~~~~~~~~~~~~~~~~l~  370 (400)
T cd05105         306 MAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS------TFYN---------KIKSGYRMAKPDHATQEVY  370 (400)
T ss_pred             EChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH------HHHH---------HHhcCCCCCCCccCCHHHH
Confidence            68999988899999999999999999997 888875321110      0001         1111111122233455789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.+|.+.|+..
T Consensus       371 ~li~~cl~~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         371 DIMVKCWNSEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             HHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.40  E-value=1.6e-13  Score=110.45  Aligned_cols=90  Identities=26%  Similarity=0.352  Sum_probs=64.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||||++++|+++ |..||......   .+.    .....+         ...+.+..++..+.
T Consensus       175 ~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~---~~~----~~~~~~---------~~~~~~~~~~~~l~  238 (266)
T cd05033         175 TAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ---DVI----KAVEDG---------YRLPPPMDCPSALY  238 (266)
T ss_pred             cChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH---HHH----HHHHcC---------CCCCCCCCCCHHHH
Confidence            58999988899999999999999999998 88887432111   011    110000         01111223445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.+|++.|++.
T Consensus       239 ~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         239 QLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.40  E-value=1.8e-13  Score=109.75  Aligned_cols=88  Identities=27%  Similarity=0.431  Sum_probs=62.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ++||++..+.++.++|||||||+++|+++ |..||......      ...... ..+         .....+......+.
T Consensus       168 ~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~------~~~~~~-~~~---------~~~~~~~~~~~~~~  231 (256)
T cd05113         168 SPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS------ETVEKV-SQG---------LRLYRPHLASEKVY  231 (256)
T ss_pred             CCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH------HHHHHH-hcC---------CCCCCCCCCCHHHH
Confidence            57999888889999999999999999998 88887532211      000011 010         00011111245789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      +++.+||+.+|.+||++.+|+..|+
T Consensus       232 ~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         232 AIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHhhC
Confidence            9999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.40  E-value=2.1e-13  Score=109.35  Aligned_cols=89  Identities=28%  Similarity=0.413  Sum_probs=64.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||++++|+++ |+.||.......      .. ..         +......+.+...+..+.
T Consensus       170 ~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~------~~-~~---------~~~~~~~~~~~~~~~~~~  233 (260)
T cd05067         170 TAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE------VI-QN---------LERGYRMPRPDNCPEELY  233 (260)
T ss_pred             cCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH------HH-HH---------HHcCCCCCCCCCCCHHHH
Confidence            58999888889999999999999999998 999985322110      00 00         011111112222345799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.++...|+.
T Consensus       234 ~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         234 ELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHccCChhhCCCHHHHHHHhhc
Confidence            99999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.40  E-value=2.3e-13  Score=110.32  Aligned_cols=92  Identities=22%  Similarity=0.296  Sum_probs=65.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||.+....++.++|||||||++||+++ |..||.......   +.    ..         +........+..+...+.
T Consensus       178 ~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~----~~---------~~~~~~~~~~~~~~~~~~  241 (279)
T cd05109         178 MALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---IP----DL---------LEKGERLPQPPICTIDVY  241 (279)
T ss_pred             CCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----HH---------HHCCCcCCCCccCCHHHH
Confidence            68999888889999999999999999998 888875322110   11    11         111111111223445788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .++.+||+.+|+.||++.+++..|+....
T Consensus       242 ~li~~~l~~dp~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         242 MIMVKCWMIDSECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            99999999999999999999998886544

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.40  E-value=1.6e-13  Score=122.07  Aligned_cols=92  Identities=20%  Similarity=0.282  Sum_probs=75.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||-|.++...|+.++|||||||.+||++| |..||......+                +.+++..+.+...|+-|..+++
T Consensus       867 male~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e----------------I~dlle~geRLsqPpiCtiDVy  930 (1177)
T KOG1025|consen  867 MALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE----------------IPDLLEKGERLSQPPICTIDVY  930 (1177)
T ss_pred             HHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH----------------hhHHHhccccCCCCCCccHHHH
Confidence            45677788999999999999999999998 999997544332                4555555556677888999999


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .+|.+||..|+..||+|+++...+.++..
T Consensus       931 ~~mvkCwmid~~~rp~fkel~~~fs~~ar  959 (1177)
T KOG1025|consen  931 MVMVKCWMIDADSRPTFKELAEEFSRMAR  959 (1177)
T ss_pred             HHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence            99999999999999999999887776433

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.40  E-value=4e-14  Score=121.48  Aligned_cols=94  Identities=27%  Similarity=0.384  Sum_probs=72.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+..+.|+.++|||||||++||+++ |..||.......      .         ...++....+...+...+..+.
T Consensus       329 LAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~------v---------~~kI~~~~~r~~~~~~~p~~~~  393 (474)
T KOG0194|consen  329 LAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE------V---------KAKIVKNGYRMPIPSKTPKELA  393 (474)
T ss_pred             cChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH------H---------HHHHHhcCccCCCCCCCHHHHH
Confidence            69999999999999999999999999998 788885332211      0         1122233334444556677899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      .++.+||..+|+.||+|.++.+.|+.....
T Consensus       394 ~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~  423 (474)
T KOG0194|consen  394 KVMKQCWKKDPEDRPTMSTIKKKLEALEKK  423 (474)
T ss_pred             HHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence            999999999999999999999999876544

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.40  E-value=2.3e-13  Score=111.35  Aligned_cols=90  Identities=21%  Similarity=0.270  Sum_probs=66.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCH-HHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNK-VEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   79 (214)
                      ||||.+.+..|+.++||||||+.++|+..|+-||..... ...   +|+.-      +..+++.. .+..|. .+..++.
T Consensus       244 MsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~-~~~---~~~~L------l~~Iv~~p-pP~lP~~~fS~ef~  312 (364)
T KOG0581|consen  244 MSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP-PYL---DIFEL------LCAIVDEP-PPRLPEGEFSPEFR  312 (364)
T ss_pred             cChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC-CCC---CHHHH------HHHHhcCC-CCCCCcccCCHHHH
Confidence            899999999999999999999999999999999864311 111   11111      12223211 122333 3667899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .++..|++.||.+||+..|++.
T Consensus       313 ~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  313 SFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             HHHHHHhcCCcccCCCHHHHhc
Confidence            9999999999999999999985

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.40  E-value=2.1e-13  Score=111.99  Aligned_cols=95  Identities=23%  Similarity=0.257  Sum_probs=62.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS--GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||++..+.++.++||||||++++|+++  +..||......   .....+........ . ...    ...+..++..+
T Consensus       207 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~-~-~~~----~~~~~~~~~~~  277 (304)
T cd05096         207 MAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE---QVIENAGEFFRDQG-R-QVY----LFRPPPCPQGL  277 (304)
T ss_pred             cCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH---HHHHHHHHHhhhcc-c-ccc----ccCCCCCCHHH
Confidence            68999988899999999999999999987  44555432111   11111111110000 0 000    01122244578


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      .+++.+||+.+|++||++.+|...|+
T Consensus       278 ~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         278 YELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHHHHccCCchhCcCHHHHHHHHh
Confidence            99999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.40  E-value=2.3e-13  Score=112.05  Aligned_cols=91  Identities=27%  Similarity=0.337  Sum_probs=65.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+..++.++|||||||+++|+++ |..||.....      .... .         .+........+......+.
T Consensus       209 ~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~------~~~~-~---------~~~~~~~~~~~~~~~~~~~  272 (307)
T cd05098         209 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------EELF-K---------LLKEGHRMDKPSNCTNELY  272 (307)
T ss_pred             eChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH------HHHH-H---------HHHcCCCCCCCCcCCHHHH
Confidence            68999988889999999999999999998 7788743211      1111 1         1111111122333455888


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||+.+|++||++.+|++.|+.+.
T Consensus       273 ~li~~~l~~~p~~Rps~~evl~~l~~~~  300 (307)
T cd05098         273 MMMRDCWHAVPSQRPTFKQLVEDLDRIL  300 (307)
T ss_pred             HHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.39  E-value=3.2e-13  Score=110.27  Aligned_cols=95  Identities=25%  Similarity=0.312  Sum_probs=63.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS--GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||++..+.++.++|||||||+++|+++  +..|+......   ............      .........+...+..+
T Consensus       199 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l  269 (296)
T cd05051         199 MAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ---QVIENAGHFFRD------DGRQIYLPRPPNCPKDI  269 (296)
T ss_pred             cCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH---HHHHHHHhcccc------ccccccCCCccCCCHHH
Confidence            68999888899999999999999999998  55666432111   111111111000      00111111122234579


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      .+++.+||+.+|++||++.+|+..|+
T Consensus       270 ~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         270 YELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHHHHhccChhcCCCHHHHHHHhc
Confidence            99999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.39  E-value=4.1e-13  Score=107.80  Aligned_cols=89  Identities=30%  Similarity=0.490  Sum_probs=64.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||++++|+++ |..||.......   ...   .. ..         ......+...+..+.
T Consensus       170 ~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~---~~-~~---------~~~~~~~~~~~~~~~  233 (260)
T cd05069         170 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLE---QV-ER---------GYRMPCPQGCPESLH  233 (260)
T ss_pred             CCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH---HH-Hc---------CCCCCCCcccCHHHH
Confidence            58998888889999999999999999999 888885322110   000   10 00         011112223455789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.+|++.|+.
T Consensus       234 ~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         234 ELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHhc
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.39  E-value=2.5e-13  Score=111.55  Aligned_cols=92  Identities=28%  Similarity=0.342  Sum_probs=66.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |..|+.....      .+..... ..+         .....+..++..+.
T Consensus       206 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~~~~~~~-~~~---------~~~~~~~~~~~~~~  269 (304)
T cd05101         206 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV------EELFKLL-KEG---------HRMDKPANCTNELY  269 (304)
T ss_pred             eCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHH-HcC---------CcCCCCCCCCHHHH
Confidence            68999988889999999999999999998 7777743211      1111111 111         11112223456789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .++.+||+.+|.+||++.+|++.|++...
T Consensus       270 ~li~~cl~~~p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         270 MMMRDCWHAIPSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             HHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999987544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.39  E-value=6.2e-13  Score=106.72  Aligned_cols=93  Identities=17%  Similarity=0.219  Sum_probs=66.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCH-HHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNK-VEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   79 (214)
                      +|||++.+..++.++||||||++++|+++|+.||.....    ...+..          +.+......+.+. .....+.
T Consensus       173 ~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~----------~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd08224         173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLC----------KKIEKCDYPPLPADHYSEELR  238 (267)
T ss_pred             cCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc----cHHHHH----------hhhhcCCCCCCChhhcCHHHH
Confidence            489999888899999999999999999999999853211    111111          0111111112222 3445788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||..+|++||++.+|++.|+.+.
T Consensus       239 ~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         239 DLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            9999999999999999999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.39  E-value=2.7e-13  Score=108.30  Aligned_cols=88  Identities=26%  Similarity=0.474  Sum_probs=62.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||++++|+++ |..||......      ....... .+  .....+.       ..+..+.
T Consensus       168 ~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~-~~--~~~~~~~-------~~~~~~~  231 (256)
T cd05112         168 SSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS------EVVETIN-AG--FRLYKPR-------LASQSVY  231 (256)
T ss_pred             cCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH------HHHHHHh-CC--CCCCCCC-------CCCHHHH
Confidence            58999988899999999999999999998 88888532211      1111110 00  0111111       1235799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      +++.+||+.+|++||++.+|++.|.
T Consensus       232 ~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         232 ELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             HHHHHHcccChhhCCCHHHHHHhhC
Confidence            9999999999999999999998773

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.39  E-value=5.5e-13  Score=107.28  Aligned_cols=90  Identities=27%  Similarity=0.417  Sum_probs=65.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||+...+.++.++||||||++++|+++ |..||.......       ....         +........+...+..+.
T Consensus       170 ~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-------~~~~---------~~~~~~~~~~~~~~~~l~  233 (262)
T cd05071         170 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ---------VERGYRMPCPPECPESLH  233 (262)
T ss_pred             cCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-------HHHH---------HhcCCCCCCccccCHHHH
Confidence            58999888889999999999999999999 777775321110       0000         000111112233456789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.+++..|+..
T Consensus       234 ~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         234 DLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             HHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.38  E-value=4.2e-13  Score=107.32  Aligned_cols=89  Identities=27%  Similarity=0.333  Sum_probs=64.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||++++|+++ |..||......      + ....         +........+...+..+.
T Consensus       166 ~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~-~~~~---------~~~~~~~~~~~~~~~~~~  229 (256)
T cd05039         166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK------D-VVPH---------VEKGYRMEAPEGCPPEVY  229 (256)
T ss_pred             cCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH------H-HHHH---------HhcCCCCCCccCCCHHHH
Confidence            58999988899999999999999999997 88887532111      0 0011         001111111222345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||..+|++||++.+++..|+.
T Consensus       230 ~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         230 KVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             HHHHHHhccChhhCcCHHHHHHHHhc
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.38  E-value=3.3e-13  Score=107.66  Aligned_cols=85  Identities=16%  Similarity=0.279  Sum_probs=61.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++..+.++.++||||||++++|+++|+.||......      .....         +.. ......+......+.+
T Consensus       168 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~---------~~~-~~~~~~~~~~~~~~~~  231 (256)
T cd08529         168 LSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG------ALILK---------IIR-GVFPPVSQMYSQQLAQ  231 (256)
T ss_pred             cCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH------HHHHH---------HHc-CCCCCCccccCHHHHH
Confidence            5899999888999999999999999999999998532210      00000         010 1111122234457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.++++
T Consensus       232 ~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         232 LIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             HHHHHccCCcccCcCHHHHhh
Confidence            999999999999999999976

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.38  E-value=4.3e-13  Score=109.82  Aligned_cols=95  Identities=22%  Similarity=0.311  Sum_probs=62.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS--GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||+...+.++.++|||||||+++|+++  |..||.......   ............. ....     .+.+..++..+
T Consensus       199 ~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~  269 (296)
T cd05095         199 MSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ---VIENTGEFFRDQG-RQVY-----LPKPALCPDSL  269 (296)
T ss_pred             CCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH---HHHHHHHHHhhcc-cccc-----CCCCCCCCHHH
Confidence            57888888889999999999999999998  566764322111   1110000000000 0000     01122244578


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      .+++.+||+.+|.+||++.+|.+.|+
T Consensus       270 ~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         270 YKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            99999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.38  E-value=9.9e-13  Score=106.57  Aligned_cols=86  Identities=24%  Similarity=0.359  Sum_probs=63.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||++++|+++|..|+.......                ....+.....+..+...+..+.+
T Consensus       168 ~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~  231 (277)
T cd06640         168 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR----------------VLFLIPKNNPPTLTGEFSKPFKE  231 (277)
T ss_pred             cCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh----------------HhhhhhcCCCCCCchhhhHHHHH
Confidence            58999988889999999999999999999999985322111                00111111122334456678999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|++||++.+++..
T Consensus       232 li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         232 FIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHcccCcccCcCHHHHHhC
Confidence            9999999999999999999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.38  E-value=3.3e-13  Score=111.54  Aligned_cols=91  Identities=27%  Similarity=0.392  Sum_probs=65.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||.+..+.++.++||||||++++|+++ |..||......       ........+         .....+..++..+.
T Consensus       203 ~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~-------~~~~~~~~~---------~~~~~~~~~~~~l~  266 (314)
T cd05099         203 MAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE-------ELFKLLREG---------HRMDKPSNCTHELY  266 (314)
T ss_pred             cCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcC---------CCCCCCCCCCHHHH
Confidence            68999988899999999999999999998 78887532211       111111111         11112223445788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||+.+|++||++.+++..|++..
T Consensus       267 ~li~~cl~~~p~~Rps~~~ll~~l~~~~  294 (314)
T cd05099         267 MLMRECWHAVPTQRPTFKQLVEALDKVL  294 (314)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            9999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.38  E-value=4.8e-13  Score=107.76  Aligned_cols=89  Identities=19%  Similarity=0.265  Sum_probs=62.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++..+.++.++||||||+++||+++|+.||.....      .......         ......+.........+..
T Consensus       180 ~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~------~~~~~~~---------~~~~~~~~~~~~~~~~l~~  244 (269)
T cd08528         180 SCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM------LSLATKI---------VEAVYEPLPEGMYSEDVTD  244 (269)
T ss_pred             cChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH------HHHHHHH---------hhccCCcCCcccCCHHHHH
Confidence            589999888899999999999999999999999853211      1111111         1110100001112347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHh
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      ++.+||+.+|++||++.+|..+++
T Consensus       245 li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         245 VITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHCCCCCccCCCHHHHHHHhc
Confidence            999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.37  E-value=3.3e-13  Score=108.74  Aligned_cols=89  Identities=21%  Similarity=0.310  Sum_probs=64.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||++++|+++ |..||......   ....++    .         .....+.+..++..+.
T Consensus       178 ~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i----~---------~~~~~~~~~~~~~~~~  241 (269)
T cd05065         178 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAI----E---------QDYRLPPPMDCPTALH  241 (269)
T ss_pred             cCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHH----H---------cCCcCCCcccCCHHHH
Confidence            58999988899999999999999999886 88888532211   011111    0         0011111223445788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|.+||++.+|+..|+.
T Consensus       242 ~li~~~l~~~p~~Rp~~~~i~~~l~~  267 (269)
T cd05065         242 QLMLDCWQKDRNARPKFGQIVSTLDK  267 (269)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.37  E-value=4.9e-13  Score=106.55  Aligned_cols=88  Identities=25%  Similarity=0.412  Sum_probs=63.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+.++.++.++||||||++++|+++ |..||.......      ..          ..+........+...+..+.
T Consensus       162 ~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~------~~----------~~~~~~~~~~~~~~~~~~~~  225 (251)
T cd05041         162 TAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ------TR----------ERIESGYRMPAPQLCPEEIY  225 (251)
T ss_pred             CChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH------HH----------HHHhcCCCCCCCccCCHHHH
Confidence            57999888889999999999999999998 777774322110      00          01111111112233455899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      +++.+||..+|++||++.+|+..|+
T Consensus       226 ~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         226 RLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHHhccChhhCcCHHHHHHHhh
Confidence            9999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.37  E-value=2.8e-13  Score=115.98  Aligned_cols=91  Identities=22%  Similarity=0.332  Sum_probs=65.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++|||||||+++|+++ |+.||.......      ..         ...+........+......+.
T Consensus       308 ~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~------~~---------~~~~~~~~~~~~p~~~~~~l~  372 (401)
T cd05107         308 MAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE------QF---------YNAIKRGYRMAKPAHASDEIY  372 (401)
T ss_pred             eChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH------HH---------HHHHHcCCCCCCCCCCCHHHH
Confidence            68999888889999999999999999998 788875322111      00         011111111122223445899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|..||++.+|+..|+..
T Consensus       373 ~li~~cl~~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         373 EIMQKCWEEKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.37  E-value=3.1e-13  Score=109.81  Aligned_cols=102  Identities=25%  Similarity=0.258  Sum_probs=64.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh-cC---ccccccCCccCCCCCHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ-SG---TLMEFVDPRLGSEFNKVEAE   76 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~   76 (214)
                      +|||++.++.++.++||||||++++|+++|..++......    +......... ..   .+.+.+........+...+.
T Consensus       178 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (284)
T cd05081         178 YAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE----FMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPA  253 (284)
T ss_pred             eCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh----hhhhcccccccccchHHHHHHHhcCCcCCCCCCCCH
Confidence            5899998888999999999999999999987654321110    0000000000 00   00011111111112223445


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           77 RMIKIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        77 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      .+.+++.+||+.+|++||++.+|+..|+.+
T Consensus       254 ~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         254 EIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            799999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.36  E-value=9.8e-13  Score=106.55  Aligned_cols=86  Identities=23%  Similarity=0.363  Sum_probs=61.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.|+.......      ..          ..+............+..+.+
T Consensus       168 ~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~------~~----------~~~~~~~~~~~~~~~~~~~~~  231 (277)
T cd06642         168 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR------VL----------FLIPKNSPPTLEGQYSKPFKE  231 (277)
T ss_pred             cCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh------HH----------hhhhcCCCCCCCcccCHHHHH
Confidence            58999988889999999999999999999999985322111      00          001111111122234457889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|++||++.+|+..
T Consensus       232 li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         232 FVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             HHHHHccCCcccCcCHHHHHHh
Confidence            9999999999999999999873

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.36  E-value=4.5e-13  Score=110.15  Aligned_cols=91  Identities=20%  Similarity=0.276  Sum_probs=64.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+..++.++||||||++++|+++ |+.||......       ........+         .....+..+...+.
T Consensus       178 ~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~-------~~~~~~~~~---------~~~~~~~~~~~~~~  241 (303)
T cd05110         178 MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR-------EIPDLLEKG---------ERLPQPPICTIDVY  241 (303)
T ss_pred             CCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHCC---------CCCCCCCCCCHHHH
Confidence            68999888889999999999999999997 88888532110       011111111         11111122344788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      .++.+||..+|++||++.+++..|+...
T Consensus       242 ~li~~c~~~~p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         242 MVMVKCWMIDADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.36  E-value=5e-13  Score=106.84  Aligned_cols=89  Identities=22%  Similarity=0.313  Sum_probs=64.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||++++|+++ |+.||......      ... .....+         .....+...+..+.
T Consensus       164 ~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~------~~~-~~~~~~---------~~~~~~~~~~~~~~  227 (254)
T cd05083         164 TAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK------EVK-ECVEKG---------YRMEPPEGCPADVY  227 (254)
T ss_pred             cCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH------HHH-HHHhCC---------CCCCCCCcCCHHHH
Confidence            58999888899999999999999999997 88887532211      111 111111         11111222345788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      .++.+||+.+|+.||++.+|+..|++
T Consensus       228 ~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         228 VLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            99999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.36  E-value=3.8e-13  Score=110.66  Aligned_cols=90  Identities=22%  Similarity=0.278  Sum_probs=64.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++|||||||+++|+++ |..||......      +.. ..         +........+......+.
T Consensus       190 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~-~~---------~~~~~~~~~~~~~~~~~~  253 (303)
T cd05088         190 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------ELY-EK---------LPQGYRLEKPLNCDDEVY  253 (303)
T ss_pred             cCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH------HHH-HH---------HhcCCcCCCCCCCCHHHH
Confidence            58998888888999999999999999998 88888532211      100 00         001111111122334688


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.+++..|+.+
T Consensus       254 ~li~~~l~~~p~~Rp~~~~il~~l~~~  280 (303)
T cd05088         254 DLMRQCWREKPYERPSFAQILVSLNRM  280 (303)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.36  E-value=6.5e-13  Score=108.70  Aligned_cols=95  Identities=21%  Similarity=0.307  Sum_probs=62.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS--GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      +|||++..+.++.++|||||||+++|+++  +..||.......   .............      .......+...+..+
T Consensus       198 ~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~~~~~~l  268 (295)
T cd05097         198 MAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ---VIENTGEFFRNQG------RQIYLSQTPLCPSPV  268 (295)
T ss_pred             cChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH---HHHHHHHhhhhcc------ccccCCCCCCCCHHH
Confidence            58999888899999999999999999998  455664322111   1111111100000      000001111234589


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      .+++.+||+.+|++||++.+|++.|+
T Consensus       269 ~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         269 FKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            99999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.36  E-value=3.7e-13  Score=115.94  Aligned_cols=97  Identities=21%  Similarity=0.266  Sum_probs=69.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc--CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS--GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||+|.+..+++|.++|||+||+.+||+++  +..||.....+.   .++-+..      +..--........|.-|+..+
T Consensus       706 mawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~~~------~~~~~~~~~~l~~P~~cp~~l  776 (807)
T KOG1094|consen  706 MAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENAGE------FFRDQGRQVVLSRPPACPQGL  776 (807)
T ss_pred             hhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhhhh------hcCCCCcceeccCCCcCcHHH
Confidence            79999999999999999999999999975  778886433221   1111111      110001111234456678899


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++|++||..+.++||+|+++...|+..
T Consensus       777 yelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  777 YELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             HHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            9999999999999999999999988753

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.36  E-value=5.9e-13  Score=106.42  Aligned_cols=89  Identities=22%  Similarity=0.330  Sum_probs=63.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |+.||......      +.........         .....+...+..+.
T Consensus       167 ~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~~~~~~~~~~---------~~~~~~~~~~~~~~  231 (257)
T cd05040         167 CAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS------QILKKIDKEG---------ERLERPEACPQDIY  231 (257)
T ss_pred             cCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHhcC---------CcCCCCccCCHHHH
Confidence            58999888899999999999999999998 99998532111      1111110000         00111222345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      +++.+||+.+|++||++.+|+..|.
T Consensus       232 ~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         232 NVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHCCCCcccCCCHHHHHHHhc
Confidence            9999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.36  E-value=6.7e-13  Score=106.54  Aligned_cols=89  Identities=27%  Similarity=0.436  Sum_probs=63.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||++++|+++ |+.||.......   +.    .....         ......+...+..+.
T Consensus       170 ~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~----~~~~~---------~~~~~~~~~~~~~~~  233 (260)
T cd05073         170 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---VI----RALER---------GYRMPRPENCPEELY  233 (260)
T ss_pred             cCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH---HH----HHHhC---------CCCCCCcccCCHHHH
Confidence            58999988889999999999999999998 888885321110   00    00001         111111222345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      .++.+||+.+|++||++.++...|+.
T Consensus       234 ~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         234 NIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHHcccCcccCcCHHHHHHHHhc
Confidence            99999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.35  E-value=6.6e-13  Score=106.39  Aligned_cols=87  Identities=17%  Similarity=0.173  Sum_probs=62.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||+++||+++|+.||......      ......         .........+......+..
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~---------~~~~~~~~~~~~~~~~~~~  238 (263)
T cd06625         174 MSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM------AAIFKI---------ATQPTNPQLPSHVSPDARN  238 (263)
T ss_pred             cCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH------HHHHHH---------hccCCCCCCCccCCHHHHH
Confidence            5899999888999999999999999999999998532111      000010         1111111223334457889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||..+|.+||++.+++..
T Consensus       239 li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         239 FLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             HHHHHhhcCcccCCCHHHHhhC
Confidence            9999999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.35  E-value=1.2e-12  Score=104.41  Aligned_cols=87  Identities=24%  Similarity=0.311  Sum_probs=61.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||++++|+++|+.|+.........      ..      ......+..  ..+......+.+
T Consensus       166 ~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~------~~------~~~~~~~~~--~~~~~~~~~~~~  231 (256)
T cd06612         166 MAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI------FM------IPNKPPPTL--SDPEKWSPEFND  231 (256)
T ss_pred             cCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh------hh------hccCCCCCC--CchhhcCHHHHH
Confidence            5899998889999999999999999999999998643221100      00      000000111  112233457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.+|+.
T Consensus       232 ~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         232 FVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHHHHHhcChhhCcCHHHHhc
Confidence            999999999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.35  E-value=7.9e-13  Score=106.52  Aligned_cols=90  Identities=22%  Similarity=0.364  Sum_probs=64.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++.++.++.++||||||++++|+++ |..||.......   ....   . ..+         ...+.+...+..+.
T Consensus       176 ~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~---~-~~~---------~~~~~~~~~~~~~~  239 (267)
T cd05066         176 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKA---I-EEG---------YRLPAPMDCPAALH  239 (267)
T ss_pred             cCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHH---H-hCC---------CcCCCCCCCCHHHH
Confidence            58999988889999999999999999886 998885322111   1110   0 000         00111222345788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|.+||++.++++.|++.
T Consensus       240 ~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         240 QLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.35  E-value=1e-12  Score=106.13  Aligned_cols=85  Identities=26%  Similarity=0.409  Sum_probs=60.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHH-HHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKV-EAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++|+.||.......      ..... ...     ..+    ..+.. .+..+.
T Consensus       165 ~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~------~~~~~-~~~-----~~~----~~~~~~~~~~~~  228 (274)
T cd06609         165 MAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR------VLFLI-PKN-----NPP----SLEGNKFSKPFK  228 (274)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH------HHHHh-hhc-----CCC----CCcccccCHHHH
Confidence            58999988889999999999999999999999985322110      00000 000     111    11111 344788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +++.+||..+|++||++++++.
T Consensus       229 ~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         229 DFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             HHHHHHhhCChhhCcCHHHHhh
Confidence            9999999999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.34  E-value=8.9e-13  Score=106.31  Aligned_cols=92  Identities=24%  Similarity=0.326  Sum_probs=65.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||||++++|+++ |..||.......      ...... .+.         ....+..++..+.
T Consensus       175 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~------~~~~~~-~~~---------~~~~~~~~~~~~~  238 (270)
T cd05056         175 MAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND------VIGRIE-NGE---------RLPMPPNCPPTLY  238 (270)
T ss_pred             cChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHH-cCC---------cCCCCCCCCHHHH
Confidence            58999888889999999999999999986 999985332211      000110 000         0011223445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .++.+||..+|++||++.+++..|+...+
T Consensus       239 ~li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         239 SLMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.34  E-value=9.6e-13  Score=105.42  Aligned_cols=89  Identities=30%  Similarity=0.471  Sum_probs=63.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+.+..++.++||||||++++|+++ |+.||.......   ...   ..          ........+...+..+.
T Consensus       171 ~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~---~~----------~~~~~~~~~~~~~~~~~  234 (261)
T cd05034         171 TAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE---VLE---QV----------ERGYRMPRPPNCPEELY  234 (261)
T ss_pred             cCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH---HH----------HcCCCCCCCCCCCHHHH
Confidence            57999888889999999999999999998 888885321110   000   00          00111111222345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.++...|+.
T Consensus       235 ~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         235 DLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHHcccCcccCCCHHHHHHHHhc
Confidence            99999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.34  E-value=4.5e-13  Score=108.45  Aligned_cols=105  Identities=19%  Similarity=0.251  Sum_probs=66.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.|+.......... ............+.+.+........+..++..+..
T Consensus       179 ~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (284)
T cd05038         179 YAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRM-IGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYD  257 (284)
T ss_pred             cCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccc-cccccccccHHHHHHHHHcCCcCCCCccCCHHHHH
Confidence            47998888889999999999999999999998875322111000 00000000000001111111111122334467999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++.+||+.+|++||++.+|+.+|+.+
T Consensus       258 li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         258 LMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHHHHhccChhhCCCHHHHHHHHhhc
Confidence            99999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.33  E-value=4.9e-13  Score=106.84  Aligned_cols=86  Identities=15%  Similarity=0.181  Sum_probs=61.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++||||||++++++++|+.||.....      ........ .+.         ....+......+.+
T Consensus       167 ~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~------~~~~~~~~-~~~---------~~~~~~~~~~~~~~  230 (255)
T cd08219         167 VPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW------KNLILKVC-QGS---------YKPLPSHYSYELRS  230 (255)
T ss_pred             cCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH------HHHHHHHh-cCC---------CCCCCcccCHHHHH
Confidence            689999888899999999999999999999999853211      11111111 111         11122233457889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|++||++.+|+..
T Consensus       231 li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         231 LIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHhCCcccCCCHHHHhhc
Confidence            9999999999999999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.33  E-value=9.4e-13  Score=104.95  Aligned_cols=88  Identities=32%  Similarity=0.415  Sum_probs=63.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||+|++++|+++ |..||......      ....... .         ......+...+..+.
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~-~---------~~~~~~~~~~~~~~~  237 (262)
T cd00192         174 MAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE------EVLEYLR-K---------GYRLPKPEYCPDELY  237 (262)
T ss_pred             cCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH------HHHHHHH-c---------CCCCCCCccCChHHH
Confidence            58999888889999999999999999998 68888643111      1111111 0         111122233355899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      .++.+||..+|++||++.+++..|+
T Consensus       238 ~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         238 ELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHHHHHccCCcccCcCHHHHHHhhC
Confidence            9999999999999999999998874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.33  E-value=1.1e-12  Score=105.71  Aligned_cols=86  Identities=23%  Similarity=0.359  Sum_probs=58.1

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      +|||++.     ...++.++|||||||++||+++|+.||.......     . ..... ..     ....   ......+
T Consensus       178 ~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~-----~-~~~~~-~~-----~~~~---~~~~~~~  242 (272)
T cd06637         178 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-----A-LFLIP-RN-----PAPR---LKSKKWS  242 (272)
T ss_pred             cCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH-----H-HHHHh-cC-----CCCC---CCCCCcC
Confidence            5899886     3468889999999999999999999985322110     0 00000 00     0000   1111234


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+.+++.+||..+|.+||++.++++
T Consensus       243 ~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         243 KKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            47889999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.33  E-value=1.5e-12  Score=104.86  Aligned_cols=86  Identities=22%  Similarity=0.344  Sum_probs=58.8

Q ss_pred             Ccccccc-cCCCCchhhHHHHHHHHHHHH-cCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYAL-WGYLTYKADVYSFGVVALEIV-SGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~-~~~~t~ksDVySfGivl~Ei~-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||++. ...++.++|||||||++||++ .|..|+.......      .. .... .. ..     ...+    ....+
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~------~~-~~~~-~~-~~-----~~~~----~~~~~  236 (262)
T cd05077         175 IAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE------KE-RFYE-GQ-CM-----LVTP----SCKEL  236 (262)
T ss_pred             cChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH------HH-HHHh-cC-cc-----CCCC----ChHHH
Confidence            6899887 467899999999999999998 4777764321111      00 0000 00 00     0111    23468


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      ..++.+||+.+|.+||++.+|+..|+
T Consensus       237 ~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         237 ADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            89999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.32  E-value=1e-12  Score=105.89  Aligned_cols=90  Identities=23%  Similarity=0.292  Sum_probs=63.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ++||.+....++.++||||||++++|+++ |+.|+......   .+..+    .....     .    ...+......+.
T Consensus       182 ~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~---~~~~~----~~~~~-----~----~~~~~~~~~~~~  245 (273)
T cd05074         182 LALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS---EIYNY----LIKGN-----R----LKQPPDCLEDVY  245 (273)
T ss_pred             cCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH---HHHHH----HHcCC-----c----CCCCCCCCHHHH
Confidence            57888888888999999999999999998 77877532111   01111    00100     0    011122345799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.+++..|++.
T Consensus       246 ~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         246 ELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            999999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.32  E-value=1.6e-12  Score=103.94  Aligned_cols=86  Identities=16%  Similarity=0.193  Sum_probs=62.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++++++|+.||......      ... ..         +........+......+.+
T Consensus       177 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~-~~---------~~~~~~~~~~~~~~~~~~~  240 (265)
T cd08217         177 MSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL------QLA-SK---------IKEGKFRRIPYRYSSELNE  240 (265)
T ss_pred             cChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH------HHH-HH---------HhcCCCCCCccccCHHHHH
Confidence            5899998888999999999999999999999998642210      111 11         1111112223344568899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|++||++.+|++.
T Consensus       241 l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         241 VIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             HHHHHccCCcccCCCHHHHhhC
Confidence            9999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.32  E-value=1.1e-12  Score=106.41  Aligned_cols=92  Identities=22%  Similarity=0.280  Sum_probs=66.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||.+..+.++.++||||||++++|+++ |+.||......      +...... .         ......+..+...+.
T Consensus       178 ~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~-~---------~~~~~~~~~~~~~~~  241 (279)
T cd05057         178 MALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV------EIPDLLE-K---------GERLPQPPICTIDVY  241 (279)
T ss_pred             cCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH------HHHHHHh-C---------CCCCCCCCCCCHHHH
Confidence            58998888889999999999999999998 99998542211      1111110 1         110111222334788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .++.+||..+|..||++.+++..|+....
T Consensus       242 ~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         242 MVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.32  E-value=1.2e-12  Score=106.68  Aligned_cols=90  Identities=29%  Similarity=0.446  Sum_probs=64.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||+++|+++ |..||......      +.. ..        +.+... ...+..++..+.
T Consensus       188 ~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~------~~~-~~--------~~~~~~-~~~~~~~~~~~~  251 (288)
T cd05061         188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------QVL-KF--------VMDGGY-LDQPDNCPERVT  251 (288)
T ss_pred             cCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH------HHH-HH--------HHcCCC-CCCCCCCCHHHH
Confidence            58999988899999999999999999998 67777432111      110 10        011100 111222345899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.++++.|++.
T Consensus       252 ~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         252 DLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence            999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.32  E-value=1.5e-12  Score=106.64  Aligned_cols=94  Identities=12%  Similarity=0.091  Sum_probs=64.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHH-HHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWA-FHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+..++.++|||||||+++|+++|+.||........  +.... ...     +..+......   ...++..+.
T Consensus       200 ~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~  269 (294)
T PHA02882        200 AGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN--LIHAAKCDF-----IKRLHEGKIK---IKNANKFIY  269 (294)
T ss_pred             cCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH--HHHHhHHHH-----HHHhhhhhhc---cCCCCHHHH
Confidence            589988888999999999999999999999999964422110  00000 000     0111111110   112345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      +++..||..+|++||++.++++.|+
T Consensus       270 ~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        270 DFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             HHHHHHHhCCCCCCCCHHHHHHhhC
Confidence            9999999999999999999998763

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.32  E-value=1.5e-12  Score=104.06  Aligned_cols=85  Identities=18%  Similarity=0.276  Sum_probs=61.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||++++|+++|+.||....      ......... .+.         ....+......+.+
T Consensus       169 ~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~------~~~~~~~~~-~~~---------~~~~~~~~~~~~~~  232 (257)
T cd08223         169 MSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD------MNSLVYRII-EGK---------LPPMPKDYSPELGE  232 (257)
T ss_pred             cChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHH-hcC---------CCCCccccCHHHHH
Confidence            68999988899999999999999999999999885321      111111111 111         11122334457999


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.++++
T Consensus       233 li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         233 LIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHHHHhccCcccCCCHHHHhc
Confidence            999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.32  E-value=8.6e-13  Score=110.54  Aligned_cols=92  Identities=32%  Similarity=0.377  Sum_probs=64.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++||||||++++|+++ |..||.......     . .......+         .....+......+.
T Consensus       248 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~-~~~~~~~~---------~~~~~~~~~~~~~~  312 (343)
T cd05103         248 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----E-FCRRLKEG---------TRMRAPDYTTPEMY  312 (343)
T ss_pred             ECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-----H-HHHHHhcc---------CCCCCCCCCCHHHH
Confidence            58999888899999999999999999997 888875322110     0 00111111         00111111234689


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||+.+|++||++.+|++.|+...
T Consensus       313 ~~~~~cl~~~p~~Rps~~eil~~l~~~~  340 (343)
T cd05103         313 QTMLDCWHGEPSQRPTFSELVEHLGNLL  340 (343)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.32  E-value=2.8e-12  Score=107.40  Aligned_cols=94  Identities=28%  Similarity=0.439  Sum_probs=62.9

Q ss_pred             Ccccccc--cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYAL--WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~--~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||+++  ...|+.|+|||||||...|+.+|..||....+...     ....+  .+.........+...........+
T Consensus       197 mAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv-----Ll~tL--qn~pp~~~t~~~~~d~~k~~~ksf  269 (516)
T KOG0582|consen  197 MAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV-----LLLTL--QNDPPTLLTSGLDKDEDKKFSKSF  269 (516)
T ss_pred             cChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH-----HHHHh--cCCCCCcccccCChHHhhhhcHHH
Confidence            8999966  35899999999999999999999999975443321     00011  111111111111111122234579


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..++..|++.||++||+++++++
T Consensus       270 ~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  270 REMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             HHHHHHHhhcCcccCCCHHHHhc
Confidence            99999999999999999999974

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.32  E-value=1.2e-12  Score=105.01  Aligned_cols=86  Identities=22%  Similarity=0.380  Sum_probs=58.8

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCC-CCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGK-NNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||++.. ..++.++||||||++++|+++|. .|+......      ... ...         ...  ...+......+
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~------~~~-~~~---------~~~--~~~~~~~~~~~  232 (258)
T cd05078         171 VPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ------KKL-QFY---------EDR--HQLPAPKWTEL  232 (258)
T ss_pred             cCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH------HHH-HHH---------Hcc--ccCCCCCcHHH
Confidence            68999876 45799999999999999999985 454321110      000 000         000  01111123468


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      .+++.+||+.+|++||++.+|++.|+
T Consensus       233 ~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         233 ANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHHHHHHhccChhhCCCHHHHHHhcC
Confidence            99999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.31  E-value=1.6e-12  Score=105.44  Aligned_cols=86  Identities=22%  Similarity=0.363  Sum_probs=58.4

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      +|||.+.     ...++.++||||||++++|+++|+.||........      ...      +.....+..   .....+
T Consensus       188 ~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~------~~~------~~~~~~~~~---~~~~~~  252 (282)
T cd06636         188 MAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA------LFL------IPRNPPPKL---KSKKWS  252 (282)
T ss_pred             cCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh------hhh------HhhCCCCCC---cccccC
Confidence            5899875     34678899999999999999999999853221110      000      000011111   111234


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+.+++.+||+.+|.+||++.+|++
T Consensus       253 ~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         253 KKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             HHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            57899999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.31  E-value=1.2e-12  Score=114.89  Aligned_cols=86  Identities=22%  Similarity=0.254  Sum_probs=62.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||++||+++|+.||....      ......... .+.         ....+...+..+..
T Consensus       212 ~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~------~~~~~~~~~-~~~---------~~~~~~~~~~~l~~  275 (496)
T PTZ00283        212 VAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN------MEEVMHKTL-AGR---------YDPLPPSISPEMQE  275 (496)
T ss_pred             eCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHh-cCC---------CCCCCCCCCHHHHH
Confidence            68999998899999999999999999999999985321      111111110 110         01122234457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|.+||++.+++..
T Consensus       276 li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        276 IVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHHHcccChhhCcCHHHHHhC
Confidence            9999999999999999998753

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.30  E-value=1.7e-12  Score=111.28  Aligned_cols=88  Identities=19%  Similarity=0.258  Sum_probs=65.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....|..|.||||+||+++||+.|++||-...+-.      -.+....+      ..+.+  ..+......+.+
T Consensus       436 MAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr------AlyLIa~n------g~P~l--k~~~klS~~~kd  501 (550)
T KOG0578|consen  436 MAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR------ALYLIATN------GTPKL--KNPEKLSPELKD  501 (550)
T ss_pred             cchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH------HHHHHhhc------CCCCc--CCccccCHHHHH
Confidence            89999999999999999999999999999999985322211      11111111      11222  233445568999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+|++.|+++|+++.++++.
T Consensus       502 FL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  502 FLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             HHHHHhhcchhcCCCHHHHhcC
Confidence            9999999999999999999863

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.30  E-value=1.8e-12  Score=104.42  Aligned_cols=85  Identities=20%  Similarity=0.264  Sum_probs=57.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++|||||||+++|+++|+.||.....      .......         ......+..+......+..
T Consensus       176 ~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~------~~~~~~~---------~~~~~~~~~~~~~~~~~~~  240 (266)
T cd06651         176 MSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA------MAAIFKI---------ATQPTNPQLPSHISEHARD  240 (266)
T ss_pred             cCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch------HHHHHHH---------hcCCCCCCCchhcCHHHHH
Confidence            589999888899999999999999999999999853211      0111111         1000111223333345556


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++ +||..+|++||++.+|+.
T Consensus       241 li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         241 FL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             HH-HHhcCChhhCcCHHHHhc
Confidence            65 788899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.30  E-value=3.1e-12  Score=100.01  Aligned_cols=91  Identities=20%  Similarity=0.344  Sum_probs=65.9

Q ss_pred             cccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCcc-ccccCCccCCCCCHHHHHH
Q 028061            2 APEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTL-MEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         2 APE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   77 (214)
                      |||.+.   +...++++|||||||+|++|+.|..||+.....              .+.+ ..+....+.-+.....++.
T Consensus       206 APELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~--------------GgSlaLAv~n~q~s~P~~~~yse~  271 (302)
T KOG2345|consen  206 APELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ--------------GGSLALAVQNAQISIPNSSRYSEA  271 (302)
T ss_pred             CchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc--------------CCeEEEeeeccccccCCCCCccHH
Confidence            899886   557899999999999999999999999743221              1111 1222222211111125668


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +.+++..|++.||.+||++.+++..++..
T Consensus       272 l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  272 LHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             HHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            99999999999999999999999888753

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.30  E-value=2.1e-12  Score=103.00  Aligned_cols=85  Identities=19%  Similarity=0.281  Sum_probs=60.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+....++.++||||||++++|+++|+.||......      ..+...         .... ....+......+.+
T Consensus       168 ~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~------~~~~~~---------~~~~-~~~~~~~~~~~l~~  231 (256)
T cd08220         168 ISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP------ALVLKI---------MSGT-FAPISDRYSPDLRQ  231 (256)
T ss_pred             cCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH------HHHHHH---------HhcC-CCCCCCCcCHHHHH
Confidence            5899998888999999999999999999999998532211      111111         0000 01111223447899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.+++.
T Consensus       232 li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         232 LILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HHHHHccCChhhCCCHHHHhh
Confidence            999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.30  E-value=2.2e-12  Score=107.47  Aligned_cols=36  Identities=22%  Similarity=0.398  Sum_probs=33.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      +|||++.+..++.++|||||||+++|+++|+.||..
T Consensus       169 ~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         169 MSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             CCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            689999988999999999999999999999999853

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.29  E-value=7.7e-12  Score=100.86  Aligned_cols=92  Identities=25%  Similarity=0.369  Sum_probs=58.9

Q ss_pred             CcccccccC-------CCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCH
Q 028061            1 MAPEYALWG-------YLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNK   72 (214)
Q Consensus         1 mAPE~~~~~-------~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (214)
                      ||||++...       .++.++||||||++++|+++ |+.||.......   ..    .....+......++....    
T Consensus       169 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~----  237 (269)
T cd05087         169 IAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ---VL----TYTVREQQLKLPKPRLKL----  237 (269)
T ss_pred             cCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH---HH----HHHhhcccCCCCCCccCC----
Confidence            589987532       35789999999999999996 988985432211   00    000011111112222211    


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           73 VEAERMIKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        73 ~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      .....+.+++.+|| .+|++||++.+|+..|.
T Consensus       238 ~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         238 PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            12336788999999 58999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.29  E-value=3.2e-12  Score=104.02  Aligned_cols=90  Identities=22%  Similarity=0.273  Sum_probs=60.9

Q ss_pred             CcccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALWG---YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~~---~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||++...   .++.++||||||++++|+++|+.||....     .........      .....+.+...........
T Consensus       174 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~------~~~~~~~~~~~~~~~~~~~  242 (288)
T cd06616         174 MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQV------VKGDPPILSNSEEREFSPS  242 (288)
T ss_pred             cCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhh------cCCCCCcCCCcCCCccCHH
Confidence            589988765   68999999999999999999999985321     000100000      0001111111112234557


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +.+++.+||+.+|++||++.+|+.
T Consensus       243 l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         243 FVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhc
Confidence            899999999999999999999986

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.29  E-value=1.8e-12  Score=103.62  Aligned_cols=85  Identities=13%  Similarity=0.202  Sum_probs=61.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.++.++.++||||||++++|+++|+.||....      ..+.....         +... ....+......+..
T Consensus       168 ~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~---------~~~~-~~~~~~~~~~~~~~  231 (256)
T cd08218         168 LSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN------MKNLVLKI---------IRGS-YPPVSSHYSYDLRN  231 (256)
T ss_pred             cCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC------HHHHHHHH---------hcCC-CCCCcccCCHHHHH
Confidence            58999888889999999999999999999999985321      11111111         1111 11122234457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|.+||++.+|+.
T Consensus       232 li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         232 LVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             HHHHHhhCChhhCcCHHHHhh
Confidence            999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.29  E-value=2.8e-12  Score=104.00  Aligned_cols=86  Identities=24%  Similarity=0.375  Sum_probs=59.2

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHH-cCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIV-SGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      +|||++.. ..++.++||||||+++||++ +|+.||.......   ...    ....       .......    ....+
T Consensus       187 ~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~-------~~~~~~~----~~~~~  248 (274)
T cd05076         187 IAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE---KER----FYEK-------KHRLPEP----SCKEL  248 (274)
T ss_pred             cCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH---HHH----HHHh-------ccCCCCC----CChHH
Confidence            68998875 56899999999999999995 6888885332211   000    0000       0001111    12368


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      .+++.+||+.+|++||+|.+|++.|.
T Consensus       249 ~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         249 ATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HHHHHHHcccChhhCcCHHHHHHhhC
Confidence            89999999999999999999998773

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.29  E-value=2.7e-12  Score=103.16  Aligned_cols=85  Identities=25%  Similarity=0.322  Sum_probs=61.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++..+.++.++||||||++++|+++|+.||......      .....      +.....    +..+...+..+..
T Consensus       179 ~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~------~~~~~~----~~~~~~~~~~~~~  242 (267)
T cd06628         179 MAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL------QAIFK------IGENAS----PEIPSNISSEAID  242 (267)
T ss_pred             cChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH------HHHHH------HhccCC----CcCCcccCHHHHH
Confidence            5899988888999999999999999999999998632110      00000      011111    1222334457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|.+||++.+|++
T Consensus       243 li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         243 FLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HHHHHccCCchhCcCHHHHhh
Confidence            999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.28  E-value=4.7e-12  Score=103.85  Aligned_cols=87  Identities=18%  Similarity=0.269  Sum_probs=61.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++|||||||+++|+++|+.||.......      ........+      .+.  ...+......+.+
T Consensus       183 ~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~------~~~~~~~~~------~~~--~~~~~~~~~~l~~  248 (296)
T cd06654         183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR------ALYLIATNG------TPE--LQNPEKLSAIFRD  248 (296)
T ss_pred             cCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH------hHHHHhcCC------CCC--CCCccccCHHHHH
Confidence            58999988888999999999999999999999985322111      111110000      000  1112233456889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||..+|++||++.+|+.
T Consensus       249 li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         249 FLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             HHHHHCcCCcccCcCHHHHhh
Confidence            999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.28  E-value=4.8e-12  Score=101.93  Aligned_cols=87  Identities=20%  Similarity=0.296  Sum_probs=59.4

Q ss_pred             CcccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWG--YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~--~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      +|||++..+  .++.++||||||++++|+++|+.||........   ..+  .         ..-....+..+......+
T Consensus       176 ~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~---~~~--~---------~~~~~~~~~~~~~~~~~~  241 (268)
T cd06624         176 MAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA---AMF--K---------VGMFKIHPEIPESLSAEA  241 (268)
T ss_pred             cChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh---hHh--h---------hhhhccCCCCCcccCHHH
Confidence            589988654  378999999999999999999999853221110   000  0         000001112233344578


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..++.+||+.+|.+||++.+++.
T Consensus       242 ~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         242 KNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             HHHHHHHcCCCchhCCCHHHHHh
Confidence            99999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.28  E-value=4.3e-12  Score=104.44  Aligned_cols=87  Identities=22%  Similarity=0.317  Sum_probs=59.6

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||++.   .+.++.++||||||+++||+++|+.||.....      .......         ................
T Consensus       178 ~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~------~~~~~~~---------~~~~~~~~~~~~~~~~  242 (307)
T cd06607         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHI---------AQNDSPTLSSNDWSDY  242 (307)
T ss_pred             cCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH------HHHHHHH---------hcCCCCCCCchhhCHH
Confidence            6899874   45788999999999999999999999853211      0111111         0000001112234557


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      +..++.+||+.+|++||++.+|+..
T Consensus       243 ~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         243 FRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhcC
Confidence            8999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.27  E-value=7.3e-12  Score=101.84  Aligned_cols=94  Identities=24%  Similarity=0.311  Sum_probs=64.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCC-----CchhHHHHHHhhcCccccccCCccCCCCC-HHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNC-----TCPLDWAFHLHQSGTLMEFVDPRLGSEFN-KVE   74 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   74 (214)
                      +|||++..+.++.++|||||||+++|+++|+.||........     ..+..+...         .+.... ...+ ...
T Consensus       169 ~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~  238 (284)
T cd06620         169 MSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQ---------IVQEPP-PRLPSSDF  238 (284)
T ss_pred             CCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHH---------HhhccC-CCCCchhc
Confidence            589998888999999999999999999999999864332110     001111111         111110 1111 124


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           75 AERMIKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      +..+.+++.+||+.+|++||++.+|++...
T Consensus       239 ~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~  268 (284)
T cd06620         239 PEDLRDFVDACLLKDPTERPTPQQLCAMPP  268 (284)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence            457899999999999999999999997643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.27  E-value=3.5e-12  Score=101.78  Aligned_cols=85  Identities=15%  Similarity=0.223  Sum_probs=60.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||....      .........         .... ..........+.+
T Consensus       169 ~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~---------~~~~-~~~~~~~~~~~~~  232 (257)
T cd08225         169 LSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN------LHQLVLKIC---------QGYF-APISPNFSRDLRS  232 (257)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHh---------cccC-CCCCCCCCHHHHH
Confidence            57999888889999999999999999999999985321      111111111         1111 0111123347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.+|++
T Consensus       233 ~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         233 LISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             HHHHHhccChhhCcCHHHHhh
Confidence            999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.26  E-value=4.6e-12  Score=101.89  Aligned_cols=91  Identities=22%  Similarity=0.320  Sum_probs=59.0

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||.+.   ...++.++||||||++++|+++|+.|+.........       ......   ....+..  .........
T Consensus       173 ~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-------~~~~~~---~~~~~~~--~~~~~~~~~  240 (267)
T cd06646         173 MAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-------FLMSKS---NFQPPKL--KDKTKWSST  240 (267)
T ss_pred             cCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-------eeeecC---CCCCCCC--ccccccCHH
Confidence            5899874   345788999999999999999999988532211100       000000   0000111  001123357


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSML  103 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~L  103 (214)
                      +.+++.+||+.+|++||++.+|++.|
T Consensus       241 ~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         241 FHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             HHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            89999999999999999999998643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.26  E-value=1.8e-12  Score=105.57  Aligned_cols=98  Identities=18%  Similarity=0.186  Sum_probs=60.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh---cCcc-------ccccCCccCC--
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ---SGTL-------MEFVDPRLGS--   68 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~~--   68 (214)
                      +|||++....++.++|||||||+++|+++|+.||......+   ..........   ....       .....+....  
T Consensus       176 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (290)
T cd07862         176 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPI  252 (290)
T ss_pred             cChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHHhCCCChhhchhhhcccchhccCCCCCCH
Confidence            68999988899999999999999999999999986432211   1111100000   0000       0000000000  


Q ss_pred             -CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 -EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 -~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                       ...+.....+.+++.+||+.+|++||++.++++
T Consensus       253 ~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         253 EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             HHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence             000122346789999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.26  E-value=1.7e-11  Score=99.71  Aligned_cols=101  Identities=11%  Similarity=0.115  Sum_probs=61.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhH---------HHHHHhhcCccccccCCccCC---
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLD---------WAFHLHQSGTLMEFVDPRLGS---   68 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~---   68 (214)
                      +|||++.+..++.++|||||||+++|+++|+.||.............         ................+....   
T Consensus       168 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (287)
T cd07848         168 RSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQS  247 (287)
T ss_pred             CCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCccc
Confidence            68999988889999999999999999999999986432111000000         000000000000000000000   


Q ss_pred             ---CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 ---EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                         .........+.+++.+||+.+|++||++.++++
T Consensus       248 ~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         248 LERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             HHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence               001123456899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.26  E-value=7.7e-13  Score=108.64  Aligned_cols=91  Identities=21%  Similarity=0.231  Sum_probs=64.9

Q ss_pred             CcccccccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLT-YKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t-~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+... .++||||+||+++||+||+.||...     .....+...         +......+..|...+....
T Consensus       188 maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~---------ig~~~~~P~ip~~ls~~a~  253 (313)
T KOG0198|consen  188 MAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLL---------IGREDSLPEIPDSLSDEAK  253 (313)
T ss_pred             cCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHH---------HhccCCCCCCCcccCHHHH
Confidence            899999965333 4999999999999999999998642     111111111         1111122244555666889


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+|+..+|+.||++.+++...--
T Consensus       254 ~Fl~~C~~~~p~~Rpta~eLL~hpf~  279 (313)
T KOG0198|consen  254 DFLRKCFKRDPEKRPTAEELLEHPFL  279 (313)
T ss_pred             HHHHHHhhcCcccCcCHHHHhhChhh
Confidence            99999999999999999999976443

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.26  E-value=1.5e-11  Score=99.87  Aligned_cols=93  Identities=20%  Similarity=0.321  Sum_probs=61.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCc-hhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC-PLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++|+.||.......... ........      .....+.+.   .......+.
T Consensus       160 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------~~~~~~~~~---~~~~~~~~~  230 (279)
T cd06619         160 MAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCI------VDEDPPVLP---VGQFSEKFV  230 (279)
T ss_pred             cCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHH------hccCCCCCC---CCcCCHHHH
Confidence            58999988889999999999999999999999986432221110 00110000      000011110   111234688


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      +++.+||+.+|++||++.+++..
T Consensus       231 ~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         231 HFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHHHHHhhCChhhCCCHHHHhcC
Confidence            99999999999999999998753

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.26  E-value=5.4e-12  Score=106.06  Aligned_cols=89  Identities=18%  Similarity=0.226  Sum_probs=58.7

Q ss_pred             Cccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYALW-----GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~~-----~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      ||||++..     ...+.++|||||||++||+++|+.||.......   .........          .......+....
T Consensus       235 ~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~---~~~~~~~~~----------~~~~~~~~~~~~  301 (353)
T PLN00034        235 MSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD---WASLMCAIC----------MSQPPEAPATAS  301 (353)
T ss_pred             cCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc---HHHHHHHHh----------ccCCCCCCCccC
Confidence            68998753     234568999999999999999999986322111   111000000          000111222344


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ..+.+|+.+||+.+|++||++.+|++.
T Consensus       302 ~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        302 REFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            578999999999999999999999863

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.25  E-value=4.7e-12  Score=100.89  Aligned_cols=87  Identities=33%  Similarity=0.430  Sum_probs=61.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||+|++++|+++ |..||.....      ....... ..+.         ....+...+..+.
T Consensus       171 ~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~------~~~~~~~-~~~~---------~~~~~~~~~~~~~  234 (258)
T smart00219      171 MAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN------EEVLEYL-KKGY---------RLPKPENCPPEIY  234 (258)
T ss_pred             cChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHH-hcCC---------CCCCCCcCCHHHH
Confidence            58998888889999999999999999998 7777753111      1111011 0110         1111222455789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVSML  103 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L  103 (214)
                      +++.+||..+|++||++.++++.|
T Consensus       235 ~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      235 KLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHCcCChhhCcCHHHHHhhC
Confidence            999999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.25  E-value=3.8e-12  Score=111.41  Aligned_cols=85  Identities=20%  Similarity=0.260  Sum_probs=61.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||.....      .......         +.... ...+......+.+
T Consensus       238 ~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~------~~~~~~~---------~~~~~-~~~~~~~s~~~~~  301 (478)
T PTZ00267        238 LAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ------REIMQQV---------LYGKY-DPFPCPVSSGMKA  301 (478)
T ss_pred             cCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHH---------HhCCC-CCCCccCCHHHHH
Confidence            689999988999999999999999999999999853211      1111111         11000 1122223457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.+++.
T Consensus       302 li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        302 LLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHHhccChhhCcCHHHHHh
Confidence            999999999999999999864

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.25  E-value=5.7e-12  Score=101.77  Aligned_cols=89  Identities=30%  Similarity=0.410  Sum_probs=62.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+..+..+.++||||||++++|+++ |..||.......      .. .....+...        ...+...+..+.
T Consensus       185 ~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~------~~-~~~~~~~~~--------~~~~~~~~~~l~  249 (275)
T cd05046         185 LAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE------VL-NRLQAGKLE--------LPVPEGCPSRLY  249 (275)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH------HH-HHHHcCCcC--------CCCCCCCCHHHH
Confidence            58999888888999999999999999998 777774322111      00 111111110        011112344789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      .++.+||+.+|++||++.+++..|.
T Consensus       250 ~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         250 KLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHHhc
Confidence            9999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.25  E-value=3.1e-12  Score=104.26  Aligned_cols=88  Identities=17%  Similarity=0.184  Sum_probs=61.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++|+++|+.||........   ........        ...  ....+......+..
T Consensus       168 ~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~---~~~~~~~~--------~~~--~~~~~~~~s~~~~~  234 (285)
T cd05631         168 MAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK---REEVDRRV--------KED--QEEYSEKFSEDAKS  234 (285)
T ss_pred             cCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh---HHHHHHHh--------hcc--cccCCccCCHHHHH
Confidence            699999999999999999999999999999999964332111   00000000        000  01122223447889


Q ss_pred             HHHHhhccCCCCCCC-----HHHHHH
Q 028061           81 IALLCTNASPSLRPT-----MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs-----~~~v~~  101 (214)
                      |+.+||+.+|++||+     +.++++
T Consensus       235 li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         235 ICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             HHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            999999999999997     677764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.24  E-value=5.6e-12  Score=101.29  Aligned_cols=87  Identities=20%  Similarity=0.289  Sum_probs=60.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||++++|+++|+.||.......     .. ......    ....+    ..+......+..
T Consensus       175 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----~~-~~~~~~----~~~~~----~~~~~~~~~~~~  240 (265)
T cd06631         175 MAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-----AM-FYIGAH----RGLMP----RLPDSFSAAAID  240 (265)
T ss_pred             cChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-----HH-HHhhhc----cCCCC----CCCCCCCHHHHH
Confidence            58999988889999999999999999999999985322110     00 000000    00011    112223457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|.+||++.+++.
T Consensus       241 ~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         241 FVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HHHHHhcCCcccCCCHHHHhc
Confidence            999999999999999999874

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.24  E-value=6e-12  Score=100.52  Aligned_cols=86  Identities=22%  Similarity=0.364  Sum_probs=61.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||++++|+++|..||.....      .......         ..... ...+......+..
T Consensus       168 ~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~------~~~~~~~---------~~~~~-~~~~~~~~~~~~~  231 (256)
T cd08221         168 MSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP------LNLVVKI---------VQGNY-TPVVSVYSSELIS  231 (256)
T ss_pred             cCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH------HHHHHHH---------HcCCC-CCCccccCHHHHH
Confidence            479988887889999999999999999999999853211      1111111         11111 1112233457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|++||++.++++.
T Consensus       232 ~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         232 LVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HHHHHcccCcccCCCHHHHhhC
Confidence            9999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.24  E-value=1.8e-11  Score=98.21  Aligned_cols=90  Identities=20%  Similarity=0.292  Sum_probs=61.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHH-HHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKV-EAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   79 (214)
                      +|||++....++.++||||||++++++++|+.||....... ....+.....         +... ....+.. ....+.
T Consensus       166 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~---------~~~~-~~~~~~~~~~~~~~  234 (265)
T cd06605         166 MAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYI---------VNEP-PPRLPSGKFSPDFQ  234 (265)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHH---------hcCC-CCCCChhhcCHHHH
Confidence            58999988899999999999999999999999985432111 1111111111         1100 0111221 445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +++.+||..+|++||++.+++.
T Consensus       235 ~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         235 DFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             HHHHHHcCCCchhCcCHHHHhh
Confidence            9999999999999999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.24  E-value=9.6e-12  Score=99.68  Aligned_cols=89  Identities=31%  Similarity=0.444  Sum_probs=60.4

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCC-CHHHHHHH
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEF-NKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   78 (214)
                      +|||++... .++.++||||||++++|+++|+.||.......  ...    .....      ..+...... .......+
T Consensus       173 ~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~~----~~~~~------~~~~~~~~~~~~~~~~~~  240 (267)
T cd06610         173 MAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK--VLM----LTLQN------DPPSLETGADYKKYSKSF  240 (267)
T ss_pred             cChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--hHH----HHhcC------CCCCcCCccccccccHHH
Confidence            579988776 78999999999999999999999986432211  000    00000      011111100 11234578


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+++.+||+.+|++||++.+|+.
T Consensus       241 ~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         241 RKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             HHHHHHHcCCChhhCcCHHHHhh
Confidence            89999999999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=9.6e-12  Score=99.50  Aligned_cols=89  Identities=22%  Similarity=0.326  Sum_probs=60.6

Q ss_pred             CcccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALWG---YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~~---~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||.+...   .++.++||||||++++|+++|+.|+.......      ...... ...   ......  ......+..
T Consensus       168 ~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~------~~~~~~-~~~---~~~~~~--~~~~~~~~~  235 (262)
T cd06613         168 MAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR------ALFLIS-KSN---FPPPKL--KDKEKWSPV  235 (262)
T ss_pred             cCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHH-hcc---CCCccc--cchhhhhHH
Confidence            589988766   88999999999999999999999985322110      000000 000   000111  112234557


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +.+++.+||..+|..||++.+|+.
T Consensus       236 ~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         236 FHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhc
Confidence            899999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.23  E-value=8.7e-12  Score=103.20  Aligned_cols=92  Identities=22%  Similarity=0.265  Sum_probs=62.0

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||++.   .+.++.++||||||++++|+++|+.||......      .....         +................
T Consensus       188 ~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~------~~~~~---------~~~~~~~~~~~~~~~~~  252 (317)
T cd06635         188 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYH---------IAQNESPTLQSNEWSDY  252 (317)
T ss_pred             cChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH------HHHHH---------HHhccCCCCCCccccHH
Confidence            5899874   467899999999999999999999997532110      00111         11111111111223446


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +..++.+||+.+|.+||++.+|+..+-...
T Consensus       253 l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         253 FRNFVDSCLQKIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             HHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence            889999999999999999999997655433

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.23  E-value=4.4e-11  Score=97.47  Aligned_cols=96  Identities=18%  Similarity=0.189  Sum_probs=62.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+....++.++|||++|++++|+++|+.||....... ....+...... ..... .+....  .........+.+
T Consensus       170 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~-~~~~~-~~~~~~--~~~~~~~~~~~~  244 (287)
T cd06621         170 MAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP-LGPIELLSYIV-NMPNP-ELKDEP--GNGIKWSEEFKD  244 (287)
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC-CChHHHHHHHh-cCCch-hhccCC--CCCCchHHHHHH
Confidence            58999988899999999999999999999999986442211 11111111111 00000 000000  000123457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||..+|.+||++.+|++
T Consensus       245 li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         245 FIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHHHHcCCCcccCCCHHHHHh
Confidence            999999999999999999986

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.23  E-value=6.1e-12  Score=102.11  Aligned_cols=101  Identities=18%  Similarity=0.251  Sum_probs=60.9

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHH--------HHh-hcCcc-----ccccCCc
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF--------HLH-QSGTL-----MEFVDPR   65 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~--------~~~-~~~~~-----~~~~~~~   65 (214)
                      +|||++... .++.++||||||++++|+++|+.||................        ... .....     .+..++.
T Consensus       168 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (288)
T cd07833         168 RAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPE  247 (288)
T ss_pred             cCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcH
Confidence            689999877 88999999999999999999998885322111000000000        000 00000     0000000


Q ss_pred             -cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           66 -LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        66 -~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                       ....++...+..+.+++.+||..+|++||++.++++
T Consensus       248 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         248 SLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence             000111223567999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.23  E-value=1.1e-11  Score=100.50  Aligned_cols=86  Identities=26%  Similarity=0.374  Sum_probs=61.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|..|+......      .....          +........+...+..+.+
T Consensus       168 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~----------~~~~~~~~~~~~~~~~~~~  231 (277)
T cd06641         168 MAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM------KVLFL----------IPKNNPPTLEGNYSKPLKE  231 (277)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH------HHHHH----------HhcCCCCCCCcccCHHHHH
Confidence            5899988888899999999999999999999998532111      00000          0000011112223457889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|.+||++.+++..
T Consensus       232 ~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         232 FVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHccCChhhCcCHHHHHhC
Confidence            9999999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.23  E-value=6.6e-12  Score=102.99  Aligned_cols=87  Identities=21%  Similarity=0.285  Sum_probs=60.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||.+....++.++|||||||+++|+++|+.||......      ..........      .+..  ..+......+.+
T Consensus       182 ~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~------~~~~~~~~~~------~~~~--~~~~~~~~~~~~  247 (296)
T cd06655         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL------RALYLIATNG------TPEL--QNPEKLSPIFRD  247 (296)
T ss_pred             cCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcC------Cccc--CCcccCCHHHHH
Confidence            5899998888999999999999999999999998532211      0010110000      0000  112223446889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||..+|.+||++.+|+.
T Consensus       248 li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         248 FLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHHHhhcChhhCCCHHHHhh
Confidence            999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.23  E-value=3.5e-12  Score=103.70  Aligned_cols=97  Identities=19%  Similarity=0.210  Sum_probs=63.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC--------CCCchhHHHHHHhhcCccccccCCccCCCCCH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDS--------NCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNK   72 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (214)
                      +|||++.+..++.++||||||++++|+++++.|.......        ............         +......+.+.
T Consensus       179 ~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~  249 (284)
T cd05079         179 YAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV---------LEEGKRLPRPP  249 (284)
T ss_pred             cCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH---------HHcCccCCCCC
Confidence            5899988888999999999999999999977654211000        000000000000         01111111122


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           73 VEAERMIKIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        73 ~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ..+..+.+++.+||+.+|++||++.++++.|+..
T Consensus       250 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         250 NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            2445899999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.23  E-value=1.6e-11  Score=98.12  Aligned_cols=86  Identities=30%  Similarity=0.452  Sum_probs=59.4

Q ss_pred             CcccccccC--CCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALWG--YLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~~--~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||++...  .++.++||||||+++||+++ |..|+.......      +. ..+...       ......    ....
T Consensus       171 ~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~------~~-~~~~~~-------~~~~~~----~~~~  232 (259)
T cd05037         171 IAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE------KE-RFYQDQ-------HRLPMP----DCAE  232 (259)
T ss_pred             cChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh------HH-HHHhcC-------CCCCCC----CchH
Confidence            589998766  78999999999999999999 466664332111      00 000000       000000    1157


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      +.+++.+||+.+|++||++.+|++.|+
T Consensus       233 ~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         233 LANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             HHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            899999999999999999999998773

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.23  E-value=9.1e-12  Score=103.96  Aligned_cols=36  Identities=22%  Similarity=0.396  Sum_probs=33.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      +|||++.+..++.++|||||||+++|+++|+.||..
T Consensus       169 ~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         169 MSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             cCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            689999888899999999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.23  E-value=9.2e-12  Score=103.50  Aligned_cols=94  Identities=23%  Similarity=0.417  Sum_probs=59.8

Q ss_pred             Cccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccC---------------
Q 028061            1 MAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVD---------------   63 (214)
Q Consensus         1 mAPE~~~~--~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------   63 (214)
                      ||||++..  ..++.++|||||||+++|+++|+.||........  ....     ..+.+...++               
T Consensus       175 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  247 (327)
T cd08227         175 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEK-----LNGTVPCLLDTTTIPAEELTMKPSR  247 (327)
T ss_pred             cChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH--HHHH-----hcCCccccccccchhhhhcccCCcc
Confidence            68999875  4689999999999999999999999864321110  0000     0000000000               


Q ss_pred             -----------------Cc----cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           64 -----------------PR----LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        64 -----------------~~----~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                                       +.    ...+........+.+++.+||+.||++||++.+|++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         248 SGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             cCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence                             00    000111223457889999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PTZ00284 protein kinase; Provisional

Probab=99.22  E-value=8.4e-12  Score=108.86  Aligned_cols=101  Identities=18%  Similarity=0.243  Sum_probs=61.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchh---------HHHHH--------Hhh-cCcccccc
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPL---------DWAFH--------LHQ-SGTLMEFV   62 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~---------~~~~~--------~~~-~~~~~~~~   62 (214)
                      ||||++.+..++.++|||||||+++||++|+.||......+....+         .|...        ++. .+.+....
T Consensus       312 ~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (467)
T PTZ00284        312 RSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCT  391 (467)
T ss_pred             cCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccC
Confidence            6999999999999999999999999999999999643321110000         01000        000 00000000


Q ss_pred             CCcc----CCCCC---HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           63 DPRL----GSEFN---KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        63 ~~~~----~~~~~---~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++..    ....+   ......+.+|+.+||+.||++||++.++++
T Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        392 DPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             CHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence            0000    00000   001235779999999999999999999986

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.22  E-value=1.6e-11  Score=99.31  Aligned_cols=86  Identities=26%  Similarity=0.378  Sum_probs=58.8

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+ .++.++||||||+++||+++|+.||.......      ....      +.....+.+...   .....+.
T Consensus       168 ~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~------~~~~------~~~~~~~~~~~~---~~~~~~~  232 (277)
T cd06917         168 MAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR------AMML------IPKSKPPRLEDN---GYSKLLR  232 (277)
T ss_pred             eCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh------hhhc------cccCCCCCCCcc---cCCHHHH
Confidence            589988754 46889999999999999999999986432111      0000      000011111110   1344788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +++.+||+.+|++||++.+++.
T Consensus       233 ~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         233 EFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             HHHHHHcCCCcccCcCHHHHhh
Confidence            9999999999999999999976

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.22  E-value=1.1e-11  Score=100.87  Aligned_cols=98  Identities=18%  Similarity=0.140  Sum_probs=60.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc---Cccc-------cccCCccC---
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS---GTLM-------EFVDPRLG---   67 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~---   67 (214)
                      +|||++.+..++.++|||||||+++|+++|+.||.......   ...........   ....       ....+...   
T Consensus       174 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (288)
T cd07863         174 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPV  250 (288)
T ss_pred             cCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH---HHHHHHHHhCCCChhhCcccccccccccCCCCCCch
Confidence            68999988899999999999999999999999885332211   00000000000   0000       00000000   


Q ss_pred             CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ....+.....+.+++.+|++.||++||++.+++.
T Consensus       251 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         251 QSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             HHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            0011123446789999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.22  E-value=1.7e-11  Score=107.92  Aligned_cols=87  Identities=20%  Similarity=0.336  Sum_probs=68.1

Q ss_pred             CcccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWG--YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~--~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||++-.|  .|..++|||||||.+.||.||++||.........              ..++---+..++.|.+...+.
T Consensus       743 MAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA--------------MFkVGmyKvHP~iPeelsaea  808 (1226)
T KOG4279|consen  743 MAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA--------------MFKVGMYKVHPPIPEELSAEA  808 (1226)
T ss_pred             hChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh--------------hhhhcceecCCCCcHHHHHHH
Confidence            899999865  6889999999999999999999999654433210              111111223356788888899


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+++++|+..+|.+||++++++.
T Consensus       809 k~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  809 KNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHHcCCCcccCccHHHhcc
Confidence            99999999999999999999985

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.21  E-value=1.2e-11  Score=101.89  Aligned_cols=88  Identities=24%  Similarity=0.309  Sum_probs=59.2

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||++.   .+.++.++|||||||+++|+++|+.|+......      ....... .+.     .+.   .........
T Consensus       178 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~-~~~-----~~~---~~~~~~~~~  242 (308)
T cd06634         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIA-QNE-----SPA---LQSGHWSEY  242 (308)
T ss_pred             cCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH------HHHHHHh-hcC-----CCC---cCcccccHH
Confidence            5899874   356888999999999999999999987432110      0111110 000     011   111223456


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSML  103 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~L  103 (214)
                      +..++.+||+.+|++||++.+|+...
T Consensus       243 ~~~li~~cl~~~P~~Rp~~~~ll~~~  268 (308)
T cd06634         243 FRNFVDSCLQKIPQDRPTSEVLLKHR  268 (308)
T ss_pred             HHHHHHHHhhCCcccCCCHHHHhhCc
Confidence            88999999999999999999998653

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.21  E-value=1.6e-11  Score=97.79  Aligned_cols=85  Identities=19%  Similarity=0.240  Sum_probs=61.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ++||++....++.++|+||||++++|+++|+.||......      ... ..         +........+......+..
T Consensus       168 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~------~~~-~~---------~~~~~~~~~~~~~~~~~~~  231 (256)
T cd08530         168 MAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ------DLR-YK---------VQRGKYPPIPPIYSQDLQN  231 (256)
T ss_pred             cCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHH-HH---------HhcCCCCCCchhhCHHHHH
Confidence            5799998888999999999999999999999998532211      000 00         0111111223345567999


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.+++.
T Consensus       232 li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         232 FIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HHHHHcCCCcccCCCHHHHhc
Confidence            999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.21  E-value=2.6e-11  Score=99.30  Aligned_cols=93  Identities=18%  Similarity=0.190  Sum_probs=63.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCcccccc-CCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFV-DPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||+++||+++|+.||........               +.... ........+......+.
T Consensus       182 ~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~l~  246 (293)
T cd06647         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---------------LYLIATNGTPELQNPEKLSAIFR  246 (293)
T ss_pred             cCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh---------------eeehhcCCCCCCCCccccCHHHH
Confidence            589998888899999999999999999999999864322110               00000 00000011222345688


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH--HhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSM--LEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~--L~~~~~  108 (214)
                      .++.+||+.+|++||++.+++..  ++....
T Consensus       247 ~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~  277 (293)
T cd06647         247 DFLNRCLEMDVEKRGSAKELLQHPFLKIAKP  277 (293)
T ss_pred             HHHHHHccCChhhCcCHHHHhcCHHHhcCcc
Confidence            99999999999999999999864  444433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.21  E-value=8.5e-12  Score=101.70  Aligned_cols=87  Identities=22%  Similarity=0.294  Sum_probs=60.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||.....      ........      ....+..  ..+...+..+.+
T Consensus       182 ~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~------~~~~~~~~------~~~~~~~--~~~~~~~~~l~~  247 (285)
T cd06648         182 MAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP------LQAMKRIR------DNLPPKL--KNLHKVSPRLRS  247 (285)
T ss_pred             cCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHH------hcCCCCC--cccccCCHHHHH
Confidence            589998888899999999999999999999999853211      11111111      0001111  011123447899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.+++.
T Consensus       248 li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         248 FLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHHHcccChhhCcCHHHHcc
Confidence            999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.21  E-value=1.2e-11  Score=99.02  Aligned_cols=88  Identities=28%  Similarity=0.374  Sum_probs=58.8

Q ss_pred             CcccccccCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALWGY---LTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~~~---~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      ++||++....   ++.++||||||++++|+++|+.||......     ........  .    ...+.+.  ........
T Consensus       170 ~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-----~~~~~~~~--~----~~~~~~~--~~~~~~~~  236 (264)
T cd06626         170 MAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-----FQIMFHVG--A----GHKPPIP--DSLQLSPE  236 (264)
T ss_pred             cChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-----HHHHHHHh--c----CCCCCCC--cccccCHH
Confidence            5799887665   889999999999999999999998532211     01111100  0    0011110  01112446


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +.+++.+||+.+|++||++.+++.
T Consensus       237 ~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         237 GKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHHHHHccCCcccCCCHHHHhc
Confidence            789999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.21  E-value=5.4e-12  Score=108.16  Aligned_cols=87  Identities=24%  Similarity=0.426  Sum_probs=60.2

Q ss_pred             CcccccccC-----------CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCC
Q 028061            1 MAPEYALWG-----------YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSE   69 (214)
Q Consensus         1 mAPE~~~~~-----------~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (214)
                      |+||.+...           +.+.++||||+||+||+|+.|+.||.....       .|       ..+..+.+|...=+
T Consensus       528 MsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-------~~-------aKl~aI~~P~~~Ie  593 (677)
T KOG0596|consen  528 MSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-------QI-------AKLHAITDPNHEIE  593 (677)
T ss_pred             cCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-------HH-------HHHHhhcCCCcccc
Confidence            789987521           467899999999999999999999942100       01       11344455533212


Q ss_pred             CCHHH-HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           70 FNKVE-AERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        70 ~~~~~-~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.-. ..++.++|+.|++.||.+||++.+++.
T Consensus       594 fp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  594 FPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             ccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            22111 123899999999999999999999985

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.21  E-value=1.3e-11  Score=99.16  Aligned_cols=87  Identities=23%  Similarity=0.330  Sum_probs=58.3

Q ss_pred             Cccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYALW-----GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~~-----~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      +|||++..     ..++.++||||||++++|+++|+.||.......      .....      .....+..  ..+....
T Consensus       180 ~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~------~~~~~~~~--~~~~~~~  245 (275)
T cd06608         180 MAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR------ALFKI------PRNPPPTL--KSPENWS  245 (275)
T ss_pred             cCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH------HHHHh------hccCCCCC--CchhhcC
Confidence            58998753     357789999999999999999999985321110      00000      00001111  1122244


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+.+++.+||..+|++||++.+|+.
T Consensus       246 ~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         246 KKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            57889999999999999999999975

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.20  E-value=4.5e-11  Score=96.44  Aligned_cols=92  Identities=25%  Similarity=0.341  Sum_probs=58.0

Q ss_pred             Cccccccc-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCH
Q 028061            1 MAPEYALW-------GYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNK   72 (214)
Q Consensus         1 mAPE~~~~-------~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (214)
                      +|||++..       ..++.++||||||++++|+++ |..||.....      .+...... .+......++.+...   
T Consensus       168 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~~---  237 (268)
T cd05086         168 LAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD------REVLNHVI-KDQQVKLFKPQLELP---  237 (268)
T ss_pred             cCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHH-hhcccccCCCccCCC---
Confidence            57998742       245789999999999999997 5667643211      11111111 111122233333222   


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           73 VEAERMIKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        73 ~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                       ....+.+++..|| .+|++||++.+|++.|.
T Consensus       238 -~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         238 -YSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             -CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence             2346788999999 57999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.20  E-value=2.7e-11  Score=99.38  Aligned_cols=86  Identities=19%  Similarity=0.200  Sum_probs=60.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccC-CccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVD-PRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   79 (214)
                      +|||++.+..++.++||||||++++++++|+.||........               +..... .......+......+.
T Consensus       182 ~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~  246 (297)
T cd06656         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---------------LYLIATNGTPELQNPERLSAVFR  246 (297)
T ss_pred             cCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh---------------eeeeccCCCCCCCCccccCHHHH
Confidence            579999888899999999999999999999999854222110               000000 0000111223345688


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +++.+||+.+|++||++.+|+.
T Consensus       247 ~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         247 DFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             HHHHHHccCChhhCcCHHHHhc
Confidence            9999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.20  E-value=4.4e-12  Score=105.50  Aligned_cols=99  Identities=19%  Similarity=0.201  Sum_probs=60.0

Q ss_pred             Cccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHH-----------hhcCc---cccccCC
Q 028061            1 MAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHL-----------HQSGT---LMEFVDP   64 (214)
Q Consensus         1 mAPE~~~~--~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~-----------~~~~~---~~~~~~~   64 (214)
                      +|||++..  ..++.++|||||||+++|+++|+.||.......   ........           .....   ....+.+
T Consensus       173 ~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  249 (338)
T cd07859         173 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH---QLDLITDLLGTPSPETISRVRNEKARRYLSSMRK  249 (338)
T ss_pred             CCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH---HHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcc
Confidence            68998865  688999999999999999999999985422110   00000000           00000   0000011


Q ss_pred             ccCCCCC---HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           65 RLGSEFN---KVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        65 ~~~~~~~---~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      .......   ......+.+++.+||+.+|++||++.+++..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         250 KQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             cCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            0000000   0123467899999999999999999999853

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.20  E-value=1.7e-11  Score=99.55  Aligned_cols=88  Identities=22%  Similarity=0.326  Sum_probs=58.7

Q ss_pred             Cccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYALW-----GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~~-----~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      +|||++..     ..++.++|||||||+++|+++|+.|+.......      .....      .....+..  ..+....
T Consensus       191 ~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~------~~~~~------~~~~~~~~--~~~~~~~  256 (286)
T cd06638         191 MAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR------ALFKI------PRNPPPTL--HQPELWS  256 (286)
T ss_pred             cChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH------HHhhc------cccCCCcc--cCCCCcC
Confidence            58998753     457889999999999999999999985322111      00000      00000111  0111123


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ..+..++.+||+.+|++||++.+|++.
T Consensus       257 ~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         257 NEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            468899999999999999999999864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.20  E-value=2.2e-11  Score=96.69  Aligned_cols=87  Identities=24%  Similarity=0.326  Sum_probs=62.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ++||.+.....+.++||||||++++|+++|..||....     ........         +.........+......+.+
T Consensus       170 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~  235 (260)
T cd06606         170 MAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-----NPMAALYK---------IGSSGEPPEIPEHLSEEAKD  235 (260)
T ss_pred             cCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHh---------ccccCCCcCCCcccCHHHHH
Confidence            47998888889999999999999999999999986433     11111111         11111112233334568999


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.+++.
T Consensus       236 ~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         236 FLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHHHhCcCChhhCCCHHHHhh
Confidence            999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.20  E-value=1.9e-11  Score=97.87  Aligned_cols=85  Identities=21%  Similarity=0.300  Sum_probs=60.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++++++|..|+....      ........         .. ...+..+...+..+.+
T Consensus       172 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~~~~~~~~---------~~-~~~~~~~~~~~~~~~~  235 (260)
T cd08222         172 MSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN------FLSVVLRI---------VE-GPTPSLPETYSRQLNS  235 (260)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHH---------Hc-CCCCCCcchhcHHHHH
Confidence            47998877788899999999999999999999885211      11111111         00 1111223345568899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||..+|++||++.++++
T Consensus       236 li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         236 IMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHHHHhcCChhhCcCHHHHhh
Confidence            999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.19  E-value=1.1e-11  Score=100.66  Aligned_cols=87  Identities=20%  Similarity=0.247  Sum_probs=58.3

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      ||||++.     ...++.++|||||||++||+++|+.||......      ........ .     ..+..  ..+...+
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~------~~~~~~~~-~-----~~~~~--~~~~~~~  235 (282)
T cd06643         170 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM------RVLLKIAK-S-----EPPTL--AQPSRWS  235 (282)
T ss_pred             cCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH------HHHHHHhh-c-----CCCCC--CCccccC
Confidence            6899874     345788999999999999999999998532211      11111100 0     00010  1122234


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+.+++.+||+.+|.+||++.+++.
T Consensus       236 ~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         236 SEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            57899999999999999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.19  E-value=9e-12  Score=107.95  Aligned_cols=99  Identities=19%  Similarity=0.158  Sum_probs=61.1

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh---------cCcccc-----ccCCc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ---------SGTLME-----FVDPR   65 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-----~~~~~   65 (214)
                      ||||++.+ ..++.++|||||||+++||++|..||.......  .+......+..         ......     +....
T Consensus       237 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~--~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  314 (440)
T PTZ00036        237 RAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD--QLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKD  314 (440)
T ss_pred             cCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchh
Confidence            69998865 468999999999999999999999986432211  01110000000         000000     00000


Q ss_pred             cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           66 LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        66 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +...++...+..+.+|+.+||+.+|.+||++.+++.
T Consensus       315 l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        315 LKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             HHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence            111112223457899999999999999999999984

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.19  E-value=1.7e-11  Score=99.96  Aligned_cols=87  Identities=20%  Similarity=0.289  Sum_probs=57.9

Q ss_pred             CcccccccC-----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYALWG-----YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~~~-----~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      +|||++..+     .++.++|||||||+++|+++|+.||.......      ...... ....     +.+  ..+....
T Consensus       195 ~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~------~~~~~~-~~~~-----~~~--~~~~~~~  260 (291)
T cd06639         195 MAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK------TLFKIP-RNPP-----PTL--LHPEKWC  260 (291)
T ss_pred             cChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH------HHHHHh-cCCC-----CCC--CcccccC
Confidence            589987643     36899999999999999999999985322110      000110 0100     111  0112233


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+.+++.+||+.+|++||++.+++.
T Consensus       261 ~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         261 RSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            46889999999999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.19  E-value=2.4e-11  Score=96.76  Aligned_cols=89  Identities=16%  Similarity=0.234  Sum_probs=65.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCC-HHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFN-KVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   79 (214)
                      |.||.+....|+.|+||||+||+++||+.-..||...      ++.....+.          ..+-.++.| ......+.
T Consensus       195 MSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~L~~KI----------~qgd~~~~p~~~YS~~l~  258 (375)
T KOG0591|consen  195 MSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLSLCKKI----------EQGDYPPLPDEHYSTDLR  258 (375)
T ss_pred             cCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHHHHHHH----------HcCCCCCCcHHHhhhHHH
Confidence            8899999999999999999999999999999999632      222222111          111123344 44677899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      .|+..|+..|++.||+...++..+..
T Consensus       259 ~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  259 ELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             HHHHHHccCCcccCCCcchHHHHHHH
Confidence            99999999999999995555554443

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.19  E-value=1.5e-11  Score=97.29  Aligned_cols=87  Identities=28%  Similarity=0.429  Sum_probs=59.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ++||++....++.++||||||++++++++|+.|+......      ....... ....     +...  ........+.+
T Consensus       164 ~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~-~~~~-----~~~~--~~~~~~~~~~~  229 (253)
T cd05122         164 MAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM------KALFKIA-TNGP-----PGLR--NPEKWSDEFKD  229 (253)
T ss_pred             cCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH------HHHHHHH-hcCC-----CCcC--cccccCHHHHH
Confidence            5899988888999999999999999999999998532211      1110100 0000     0010  01112457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.+++.
T Consensus       230 ~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         230 FLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHHHccCChhhCCCHHHHhc
Confidence            999999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.19  E-value=4.2e-11  Score=98.68  Aligned_cols=99  Identities=20%  Similarity=0.360  Sum_probs=60.1

Q ss_pred             Cccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHh-----------hcCcccc----ccC
Q 028061            1 MAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLH-----------QSGTLME----FVD   63 (214)
Q Consensus         1 mAPE~~~~--~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~----~~~   63 (214)
                      +|||++..  ..++.++|||||||+++|+++|+.||.......  ...+......           .......    ..+
T Consensus       175 ~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (314)
T cd08216         175 LSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEH  252 (314)
T ss_pred             cCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCchhhhcCCcCcccccccc
Confidence            58998865  358899999999999999999999986432111  0000000000           0000000    000


Q ss_pred             Cc----cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           64 PR----LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        64 ~~----~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +.    ............+.+++.+||+.+|++||++.++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         253 PNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             cchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence            00    001112233457889999999999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.19  E-value=1.5e-11  Score=100.08  Aligned_cols=87  Identities=22%  Similarity=0.336  Sum_probs=60.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ++||++....++.++||||||++++|+++|+.||......      ....... ....     +..  ......+..+.+
T Consensus       183 ~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~------~~~~~~~-~~~~-----~~~--~~~~~~~~~l~~  248 (286)
T cd06614         183 MAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL------RALFLIT-TKGI-----PPL--KNPEKWSPEFKD  248 (286)
T ss_pred             CCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHH-hcCC-----CCC--cchhhCCHHHHH
Confidence            5799888888999999999999999999999998532111      0000000 0000     000  111123457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|.+||++.+|+.
T Consensus       249 li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         249 FLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHHHHhccChhhCcCHHHHhh
Confidence            999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.18  E-value=9.9e-12  Score=100.92  Aligned_cols=90  Identities=18%  Similarity=0.151  Sum_probs=60.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++|||||||+++|+++|+.||.......  ........         .+...... ........+.+
T Consensus       161 ~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~--~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~  228 (277)
T cd05607         161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV--AKEELKRR---------TLEDEVKF-EHQNFTEESKD  228 (277)
T ss_pred             cCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh--hHHHHHHH---------hhcccccc-ccccCCHHHHH
Confidence            68999988889999999999999999999999985322111  00111100         01111100 00112346899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|++||++.+++..
T Consensus       229 li~~~L~~~P~~R~~~~~~~~~  250 (277)
T cd05607         229 ICRLFLAKKPEDRLGSREKNDD  250 (277)
T ss_pred             HHHHHhccCHhhCCCCccchhh
Confidence            9999999999999999776543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.18  E-value=9.6e-12  Score=103.63  Aligned_cols=93  Identities=14%  Similarity=0.075  Sum_probs=62.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.......      ........   ...+...............+..
T Consensus       165 ~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~---~~~~~~~~~~~~~~~~s~~~~~  235 (333)
T cd05600         165 MAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE------TWENLKYW---KETLQRPVYDDPRFNLSDEAWD  235 (333)
T ss_pred             cChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH------HHHHHHhc---cccccCCCCCccccccCHHHHH
Confidence            68999998899999999999999999999999986432211      00010000   0001100000001123457889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||..+|.+||++.+++..
T Consensus       236 li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         236 LITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHHHHhhChhhhcCCHHHHHhC
Confidence            9999999999999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.18  E-value=2.3e-11  Score=98.86  Aligned_cols=88  Identities=26%  Similarity=0.355  Sum_probs=60.1

Q ss_pred             CcccccccC------CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHH
Q 028061            1 MAPEYALWG------YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVE   74 (214)
Q Consensus         1 mAPE~~~~~------~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (214)
                      +|||++...      .++.++|||||||+++|+++|+.||.......   ...   .      +..+.. ......+...
T Consensus       168 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~---~------~~~~~~-~~~~~~~~~~  234 (286)
T cd06622         168 MAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN---IFA---Q------LSAIVD-GDPPTLPSGY  234 (286)
T ss_pred             cCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh---HHH---H------HHHHhh-cCCCCCCccc
Confidence            589987543      35889999999999999999999985321111   000   0      011111 1112233345


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           75 AERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ...+..++.+||+.+|++||++.+++.
T Consensus       235 ~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         235 SDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            567899999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.18  E-value=1.5e-11  Score=98.03  Aligned_cols=86  Identities=28%  Similarity=0.402  Sum_probs=59.4

Q ss_pred             CcccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGY-LTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~-~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ++||.+.... ++.++|+||||++++|+++|+.||.....      ............         ....+......+.
T Consensus       168 ~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~---------~~~~~~~~~~~~~  232 (258)
T cd06632         168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG------VAAVFKIGRSKE---------LPPIPDHLSDEAK  232 (258)
T ss_pred             eCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH------HHHHHHHHhccc---------CCCcCCCcCHHHH
Confidence            5789887665 89999999999999999999999854321      111111100000         0111222345788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +++.+||+.+|.+||++.+++.
T Consensus       233 ~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         233 DFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHHHHhhcCcccCcCHHHHhc
Confidence            9999999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.18  E-value=3.1e-11  Score=99.30  Aligned_cols=91  Identities=13%  Similarity=0.072  Sum_probs=62.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||......      ...... ..+.   ...+..    ....+..+..
T Consensus       183 ~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~------~~~~~~-~~~~---~~~~~~----~~~~~~~~~~  248 (305)
T cd05609         183 IAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE------ELFGQV-ISDD---IEWPEG----DEALPADAQD  248 (305)
T ss_pred             cCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHH-Hhcc---cCCCCc----cccCCHHHHH
Confidence            5899988888999999999999999999999998532111      111111 0000   011111    1123447899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      ++.+||+.+|++||++..+.+.|+.
T Consensus       249 li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         249 LISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             HHHHHhccChhhccCccCHHHHHhC
Confidence            9999999999999998777777765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.18  E-value=2.3e-11  Score=99.26  Aligned_cols=87  Identities=18%  Similarity=0.271  Sum_probs=57.9

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      +|||++.     ...++.++||||||+++||+++|+.|+......      ....... ..     ..+..  ..+....
T Consensus       177 ~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------~~~~~~~-~~-----~~~~~--~~~~~~~  242 (292)
T cd06644         177 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKIA-KS-----EPPTL--SQPSKWS  242 (292)
T ss_pred             cCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH------HHHHHHh-cC-----CCccC--CCCcccC
Confidence            5899874     345688999999999999999999998532110      1111110 00     00111  1122234


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+.+++.+||..+|++||++.++++
T Consensus       243 ~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         243 MEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            47889999999999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.18  E-value=8.7e-12  Score=103.37  Aligned_cols=84  Identities=13%  Similarity=0.210  Sum_probs=60.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++|+++|+.||......      ....... ..        ..  ..+......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~------~~~~~i~-~~--------~~--~~~~~~~~~~~~  225 (318)
T cd05570         163 IAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED------ELFQSIL-ED--------EV--RYPRWLSKEAKS  225 (318)
T ss_pred             cCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH------HHHHHHH-cC--------CC--CCCCcCCHHHHH
Confidence            6899999999999999999999999999999998532211      1111110 00        00  112223457899


Q ss_pred             HHHHhhccCCCCCCCH-----HHHHH
Q 028061           81 IALLCTNASPSLRPTM-----SEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~-----~~v~~  101 (214)
                      ++.+||+.+|.+||++     .+++.
T Consensus       226 li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         226 ILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            9999999999999999     77754

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.18  E-value=4e-12  Score=105.02  Aligned_cols=86  Identities=16%  Similarity=0.143  Sum_probs=59.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++|+++|+.||.....      ......         ++....  ..+......+.+
T Consensus       160 ~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~------~~~~~~---------~~~~~~--~~~~~~~~~~~~  222 (312)
T cd05585         160 LAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV------NEMYRK---------ILQEPL--RFPDGFDRDAKD  222 (312)
T ss_pred             CCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH------HHHHHH---------HHcCCC--CCCCcCCHHHHH
Confidence            689999988999999999999999999999999853211      111111         111111  122223457889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSML  103 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L  103 (214)
                      ++.+||+.+|.+||++..+.+.|
T Consensus       223 li~~~L~~dp~~R~~~~~~~e~l  245 (312)
T cd05585         223 LLIGLLSRDPTRRLGYNGAQEIK  245 (312)
T ss_pred             HHHHHcCCCHHHcCCCCCHHHHH
Confidence            99999999999998754444444

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.18  E-value=3.9e-11  Score=97.25  Aligned_cols=99  Identities=13%  Similarity=0.048  Sum_probs=60.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCcc---------ccccCCccC---C
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTL---------MEFVDPRLG---S   68 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~---~   68 (214)
                      +|||++....++.++||||||++++|+++|+.||......+  ...............         .........   .
T Consensus       173 ~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (287)
T cd07838         173 RAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD--QLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFK  250 (287)
T ss_pred             cChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH--HHHHHHHHcCCCChHhcCCCcccchhhcccccccchh
Confidence            58999988889999999999999999999988886432211  011100000000000         000000000   0


Q ss_pred             CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .........+.+++.+||+.+|.+||++.+++.
T Consensus       251 ~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         251 SFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             hhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            111123456789999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.18  E-value=9.7e-11  Score=97.40  Aligned_cols=99  Identities=23%  Similarity=0.347  Sum_probs=60.9

Q ss_pred             CcccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHH----------------HHh-------hc
Q 028061            1 MAPEYALWG--YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF----------------HLH-------QS   55 (214)
Q Consensus         1 mAPE~~~~~--~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~----------------~~~-------~~   55 (214)
                      ||||++.+.  .++.++|||||||+++|+++|+.||.......  .......                ...       ..
T Consensus       175 ~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (328)
T cd08226         175 LSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDS  252 (328)
T ss_pred             cChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH--HHHHHhcCCCCCCccccccchhhhhhccchhhhhc
Confidence            689998753  57899999999999999999999986432110  0000000                000       00


Q ss_pred             C----cc-----ccccCCccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           56 G----TL-----MEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        56 ~----~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +    ..     ...................+.+|+.+||+.+|++||++.++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         253 GIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             ccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            0    00     0000011111222335567899999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.18  E-value=2.6e-11  Score=97.04  Aligned_cols=88  Identities=20%  Similarity=0.286  Sum_probs=62.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHH-HHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKV-EAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   79 (214)
                      +|||.+....++.++|||+||++++|+++|+.|+.......   ..+.....         ... .....+.. .+..+.
T Consensus       167 ~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~~~~~~---------~~~-~~~~~~~~~~~~~l~  233 (264)
T cd06623         167 MSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS---FFELMQAI---------CDG-PPPSLPAEEFSPEFR  233 (264)
T ss_pred             cCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC---HHHHHHHH---------hcC-CCCCCCcccCCHHHH
Confidence            58999888889999999999999999999999986433211   11111111         000 00111222 445899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +++.+||..+|++||++.+++.
T Consensus       234 ~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         234 DFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             HHHHHHccCChhhCCCHHHHHh
Confidence            9999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.18  E-value=1.9e-11  Score=98.52  Aligned_cols=90  Identities=24%  Similarity=0.320  Sum_probs=59.2

Q ss_pred             CcccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGY--LTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~--~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      +|||++....  ++.++||||||++++|+++|..|+......      ........ ......+..    ......+..+
T Consensus       177 ~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~-~~~~~~~~~----~~~~~~~~~~  245 (272)
T cd06629         177 MAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI------AAMFKLGN-KRSAPPIPP----DVSMNLSPVA  245 (272)
T ss_pred             cCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH------HHHHHhhc-cccCCcCCc----cccccCCHHH
Confidence            4799877554  789999999999999999999998522110      11111100 001111111    1112234578


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+++.+||+.+|++||++.+|+.
T Consensus       246 ~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         246 LDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             HHHHHHHhcCChhhCCCHHHHhh
Confidence            99999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.18  E-value=1.6e-11  Score=101.28  Aligned_cols=86  Identities=13%  Similarity=0.108  Sum_probs=59.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||++++|+++|+.||.......         .      +..+................+.+
T Consensus       199 ~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~---------~------~~~~~~~~~~~~~~~~~~~~~~~  263 (316)
T cd05574         199 IAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE---------T------FSNILKKEVTFPGSPPVSSSARD  263 (316)
T ss_pred             cCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH---------H------HHHHhcCCccCCCccccCHHHHH
Confidence            58999988889999999999999999999999985332110         0      01111111110111114558999


Q ss_pred             HHHHhhccCCCCCCC----HHHHHH
Q 028061           81 IALLCTNASPSLRPT----MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs----~~~v~~  101 (214)
                      ++.+||+.+|++||+    +.+++.
T Consensus       264 li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         264 LIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             HHHHHccCCHhHCCCchhhHHHHHc
Confidence            999999999999999    666654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.18  E-value=2.9e-11  Score=97.20  Aligned_cols=85  Identities=16%  Similarity=0.196  Sum_probs=59.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+.+..++.++||||||++++|+++|+.||......     ..          +.........+..+......+..
T Consensus       176 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-----~~----------~~~~~~~~~~~~~~~~~~~~~~~  240 (265)
T cd06652         176 MSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-----AA----------IFKIATQPTNPVLPPHVSDHCRD  240 (265)
T ss_pred             cChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-----HH----------HHHHhcCCCCCCCchhhCHHHHH
Confidence            5899988888999999999999999999999998532110     00          00111111112234444557888


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||. +|++||++.+|+.
T Consensus       241 ~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         241 FLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             HHHHHhc-ChhhCCCHHHHhc
Confidence            9999995 8999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.17  E-value=2.6e-11  Score=98.41  Aligned_cols=99  Identities=17%  Similarity=0.230  Sum_probs=58.4

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHH----------HHhhcCcc-ccccCCccCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF----------HLHQSGTL-MEFVDPRLGS   68 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~   68 (214)
                      +|||++.+ ..++.++||||||++++|+++|+.||.......  .......          .......+ .....+....
T Consensus       167 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (286)
T cd07846         167 RAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID--QLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKE  244 (286)
T ss_pred             cCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH--HHHHHHHHhCCCchhhHHHhccchHhhccccccccC
Confidence            58998764 457889999999999999999998885322110  0000000          00000000 0000000000


Q ss_pred             -----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 -----EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 -----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                           ......+..+.+++.+||+.+|++||++.+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         245 IEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             cchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence                 001123457899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.17  E-value=2.1e-11  Score=96.89  Aligned_cols=85  Identities=16%  Similarity=0.285  Sum_probs=60.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+....++.++||||+|++++++++|+.||......      ......         .... ....+......+..
T Consensus       170 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~---------~~~~-~~~~~~~~~~~~~~  233 (258)
T cd08215         170 LSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL------ELALKI---------LKGQ-YPPIPSQYSSELRN  233 (258)
T ss_pred             cChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH------HHHHHH---------hcCC-CCCCCCCCCHHHHH
Confidence            5799888888999999999999999999999998533211      111111         0000 11122233457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||..+|++||++.+++.
T Consensus       234 ~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         234 LVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHHHHcCCChhhCcCHHHHhc
Confidence            999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.17  E-value=8.5e-11  Score=94.69  Aligned_cols=92  Identities=22%  Similarity=0.361  Sum_probs=58.0

Q ss_pred             Cccccccc-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCH
Q 028061            1 MAPEYALW-------GYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNK   72 (214)
Q Consensus         1 mAPE~~~~-------~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (214)
                      +|||++..       ..++.++|||||||+++|+++ |..||......      +........ ...+...+.    .+.
T Consensus       169 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------~~~~~~~~~-~~~~~~~~~----~~~  237 (269)
T cd05042         169 LAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE------QVLKQVVRE-QDIKLPKPQ----LDL  237 (269)
T ss_pred             cCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH------HHHHHHhhc-cCccCCCCc----ccc
Confidence            57898642       356889999999999999998 67777532211      000111111 111111111    122


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           73 VEAERMIKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        73 ~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      .....+..++..||. +|++||++.+|++.|.
T Consensus       238 ~~~~~~~~~~~~~~~-dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         238 KYSDRWYEVMQFCWL-DPETRPTAEEVHELLT  268 (269)
T ss_pred             cCCHHHHHHHHHHhc-CcccccCHHHHHHHhc
Confidence            234467788999995 9999999999998873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.17  E-value=2.4e-11  Score=98.83  Aligned_cols=88  Identities=11%  Similarity=0.152  Sum_probs=60.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++|+++|+.||........  .....         ..+....  ...+...+..+..
T Consensus       164 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~--~~~~~---------~~~~~~~--~~~~~~~~~~~~~  230 (280)
T cd05608         164 MAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELK---------QRILNDS--VTYPDKFSPASKS  230 (280)
T ss_pred             cCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh--HHHHH---------HhhcccC--CCCcccCCHHHHH
Confidence            689999999999999999999999999999999864322110  00000         0111111  1122234457889


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      ++.+||+.+|++||     ++.+++.
T Consensus       231 li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         231 FCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             HHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            99999999999999     5566654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.16  E-value=2.3e-11  Score=98.40  Aligned_cols=98  Identities=15%  Similarity=0.144  Sum_probs=60.5

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC------cccc--------ccCCc
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG------TLME--------FVDPR   65 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~--------~~~~~   65 (214)
                      +|||.+... .++.++||||||++++++++|+.||......+   ............      .+..        .....
T Consensus       165 ~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (283)
T cd05118         165 RAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID---QLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKA  241 (283)
T ss_pred             cCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCchHhcccchhhhhhhhhhhcccc
Confidence            589988766 78999999999999999999998885432111   000000000000      0000        00000


Q ss_pred             c--CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           66 L--GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        66 ~--~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .  ...........+..++.+||+.+|.+||++.+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         242 GMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             ccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            0  00111234567899999999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.16  E-value=2.6e-11  Score=98.32  Aligned_cols=99  Identities=14%  Similarity=0.031  Sum_probs=57.9

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHH-------hhc----CccccccCC---c
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHL-------HQS----GTLMEFVDP---R   65 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~-------~~~----~~~~~~~~~---~   65 (214)
                      +|||++.+ ..++.++||||||++++|+++|+.||.......  .........       +..    .......+.   .
T Consensus       168 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
T cd07861         168 RAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID--QLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKG  245 (285)
T ss_pred             cChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcc
Confidence            58998765 457899999999999999999999885321100  000000000       000    000000000   0


Q ss_pred             cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           66 LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        66 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ...........++.+++.+||+.||++||++.+|+.
T Consensus       246 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         246 SLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             hhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            000001112346789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.16  E-value=2.2e-11  Score=99.73  Aligned_cols=88  Identities=20%  Similarity=0.269  Sum_probs=60.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||......      ... ..     +.....+....  .......+..
T Consensus       185 ~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~------~~~-~~-----~~~~~~~~~~~--~~~~~~~~~~  250 (292)
T cd06658         185 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL------QAM-RR-----IRDNLPPRVKD--SHKVSSVLRG  250 (292)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHH-HH-----HHhcCCCcccc--ccccCHHHHH
Confidence            5899988888999999999999999999999998532111      000 00     00111111110  1122346888


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||..+|.+||++.+++..
T Consensus       251 li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         251 FLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHHccCChhHCcCHHHHhhC
Confidence            9999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.16  E-value=4.8e-11  Score=98.39  Aligned_cols=99  Identities=16%  Similarity=0.222  Sum_probs=60.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCcc--------------------cc
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTL--------------------ME   60 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~   60 (214)
                      +|||++.+..++.++||||||++++|+++|+.||.......   ...+..........                    .+
T Consensus       165 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (308)
T cd06615         165 MSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE---LEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFE  241 (308)
T ss_pred             cChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh---HHHhhcCccccccccCCcccccCCCCCccchhhHHH
Confidence            58999888889999999999999999999999985322111   00000000000000                    00


Q ss_pred             ccC---CccCCCCC-HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           61 FVD---PRLGSEFN-KVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        61 ~~~---~~~~~~~~-~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ..+   ....+..+ ......+.+++.+||..+|++||++.+|+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         242 LLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             HHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            000   00000001 0133468899999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.16  E-value=2.6e-11  Score=99.28  Aligned_cols=89  Identities=22%  Similarity=0.288  Sum_probs=58.5

Q ss_pred             CcccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHH
Q 028061            1 MAPEYALWG----YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAE   76 (214)
Q Consensus         1 mAPE~~~~~----~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (214)
                      +|||++...    .++.++||||||++++|+++|+.||......     .+........ .     .+...  .......
T Consensus       181 ~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~-~-----~~~~~--~~~~~~~  247 (296)
T cd06618         181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-----FEVLTKILQE-E-----PPSLP--PNEGFSP  247 (296)
T ss_pred             cCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-----HHHHHHHhcC-C-----CCCCC--CCCCCCH
Confidence            589988644    3788999999999999999999998531110     0000000000 0     00110  0112344


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           77 RMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        77 ~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      .+.+++.+||+.+|.+||++.+++..
T Consensus       248 ~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         248 DFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcC
Confidence            78999999999999999999999753

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.16  E-value=5e-11  Score=95.74  Aligned_cols=89  Identities=24%  Similarity=0.327  Sum_probs=62.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+....++.++||||+|++++|+++|+.||.......   .......         ..........+......+..
T Consensus       175 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~---------~~~~~~~~~~~~~~~~~~~~  242 (268)
T cd06630         175 MAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN---HLALIFK---------IASATTAPSIPEHLSPGLRD  242 (268)
T ss_pred             eCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc---hHHHHHH---------HhccCCCCCCchhhCHHHHH
Confidence            58999888888999999999999999999999985322211   1111110         00001112233445567889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||..+|++||++.+++.
T Consensus       243 ~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         243 VTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             HHHHHcCCCcccCcCHHHHhc
Confidence            999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.15  E-value=5.5e-11  Score=96.46  Aligned_cols=99  Identities=13%  Similarity=0.111  Sum_probs=58.2

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC------ccccccCCc----cCC-
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG------TLMEFVDPR----LGS-   68 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~----~~~-   68 (214)
                      +|||++.+. .++.++|||||||+++||++|+.|+.......  .............      .+....+..    ... 
T Consensus       166 ~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (284)
T cd07839         166 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD--DQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPAT  243 (284)
T ss_pred             cChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH--HHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCc
Confidence            589988764 47899999999999999999988864221110  0000000000000      000000000    000 


Q ss_pred             ----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 ----EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                          .........+.+++.+||+.+|.+||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         244 TSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             chhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence                001123457889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.15  E-value=2.4e-11  Score=96.60  Aligned_cols=91  Identities=23%  Similarity=0.343  Sum_probs=68.7

Q ss_pred             CcccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALWG---YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~~---~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      |+||.+...   ..-..+|.|||+|++||+.|++.||....+.+.               -+++.-.+++...|+.....
T Consensus       353 mspealqrkped~n~raadmwsfaillwel~trevpfadlspmec---------------gmkialeglrv~ippgis~h  417 (448)
T KOG0195|consen  353 MSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC---------------GMKIALEGLRVHIPPGISRH  417 (448)
T ss_pred             CCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh---------------hhhhhhccccccCCCCccHH
Confidence            688888754   234578999999999999999999975544331               12223333444445555668


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +.+||.-|+++||.+||.|..|+-.|+++
T Consensus       418 m~klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  418 MNKLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             HHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence            99999999999999999999999999875

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.15  E-value=8.1e-11  Score=95.09  Aligned_cols=88  Identities=17%  Similarity=0.163  Sum_probs=60.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||....... .....+...          .....  ..+......+.+
T Consensus       173 ~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~----------~~~~~--~~~~~~~~~~~~  239 (267)
T PHA03390        173 FSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLESLLKR----------QQKKL--PFIKNVSKNAND  239 (267)
T ss_pred             cChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHHHHHh----------hcccC--CcccccCHHHHH
Confidence            68999988889999999999999999999999986332211 111111111          00000  112234457899


Q ss_pred             HHHHhhccCCCCCCC-HHHHHH
Q 028061           81 IALLCTNASPSLRPT-MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs-~~~v~~  101 (214)
                      ++.+||+.+|.+||+ +.++++
T Consensus       240 li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        240 FVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHHHHhccChhhCCchHHHHhc
Confidence            999999999999995 688874

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.15  E-value=8.2e-11  Score=99.16  Aligned_cols=34  Identities=29%  Similarity=0.418  Sum_probs=30.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNM   34 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~   34 (214)
                      +|||++....++.++|||||||++||++++..++
T Consensus       223 ~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        223 NAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             cCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            6899999889999999999999999999855543

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.15  E-value=1.6e-11  Score=100.19  Aligned_cols=88  Identities=18%  Similarity=0.216  Sum_probs=60.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++||||||++++|+++|+.||........   .......      ......    ..+......+.+
T Consensus       168 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~---~~~~~~~------~~~~~~----~~~~~~~~~~~~  234 (285)
T cd05630         168 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK---REEVERL------VKEVQE----EYSEKFSPDARS  234 (285)
T ss_pred             cChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch---HHHHHhh------hhhhhh----hcCccCCHHHHH
Confidence            689999988999999999999999999999999964221110   0000000      000011    111223346889


Q ss_pred             HHHHhhccCCCCCCC-----HHHHHH
Q 028061           81 IALLCTNASPSLRPT-----MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs-----~~~v~~  101 (214)
                      ++.+||+.+|++||+     +.+++.
T Consensus       235 li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         235 LCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             HHHHHhhcCHHHccCCCCCchHHHHc
Confidence            999999999999999     777765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.15  E-value=3.3e-11  Score=99.64  Aligned_cols=86  Identities=26%  Similarity=0.390  Sum_probs=58.0

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||++.   .+.++.++||||||++++|+++|..|+......      ......... ..     +..   ........
T Consensus       184 ~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~------~~~~~~~~~-~~-----~~~---~~~~~~~~  248 (313)
T cd06633         184 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQN-DS-----PTL---QSNEWTDS  248 (313)
T ss_pred             cChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHhc-CC-----CCC---CccccCHH
Confidence            5899874   467888999999999999999999998532211      111111000 00     111   01112236


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +..++.+||+.+|.+||++.+++.
T Consensus       249 l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         249 FRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhc
Confidence            888999999999999999999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=3.6e-11  Score=97.99  Aligned_cols=88  Identities=20%  Similarity=0.240  Sum_probs=60.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++||||||++++|+++|+.||.......   ....+.         ..+... ....+...+..+..
T Consensus       168 ~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~---~~~~~~---------~~~~~~-~~~~~~~~~~~~~~  234 (285)
T cd05605         168 MAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV---KREEVE---------RRVKED-QEEYSEKFSEAARS  234 (285)
T ss_pred             cCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh---HHHHHH---------HHhhhc-ccccCcccCHHHHH
Confidence            68999988889999999999999999999999996432211   000000         001100 01122334457899


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      ++.+||+.||.+||     ++.+++.
T Consensus       235 li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         235 ICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             HHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            99999999999999     6777754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=1.8e-11  Score=100.15  Aligned_cols=84  Identities=14%  Similarity=0.081  Sum_probs=59.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++|||||||+++|+++|+.||......      ......         .....  .++......+.+
T Consensus       165 ~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~------~~~~~i---------~~~~~--~~~~~~~~~~~~  227 (291)
T cd05612         165 LAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF------GIYEKI---------LAGKL--EFPRHLDLYAKD  227 (291)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHH---------HhCCc--CCCccCCHHHHH
Confidence            6899998888999999999999999999999998532111      111011         11000  112222447889


Q ss_pred             HHHHhhccCCCCCCC-----HHHHHH
Q 028061           81 IALLCTNASPSLRPT-----MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs-----~~~v~~  101 (214)
                      ++.+||+.||.+||+     +.+++.
T Consensus       228 li~~~l~~dp~~R~~~~~~~~~~~l~  253 (291)
T cd05612         228 LIKKLLVVDRTRRLGNMKNGADDVKN  253 (291)
T ss_pred             HHHHHcCCCHHHccCCccCCHHHHhc
Confidence            999999999999995     777764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.15  E-value=1.1e-10  Score=99.73  Aligned_cols=102  Identities=14%  Similarity=0.127  Sum_probs=62.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc-----------------cccccC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT-----------------LMEFVD   63 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~   63 (214)
                      +|||++....++.++|||||||+++||++|+.||..............+....+...                 +....+
T Consensus       254 ~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (392)
T PHA03207        254 NSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLR  333 (392)
T ss_pred             cCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhccccc
Confidence            589999988999999999999999999999999865433221111110101000000                 000001


Q ss_pred             CccC-CCC--CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           64 PRLG-SEF--NKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        64 ~~~~-~~~--~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      +... +..  .......+..++.+||..+|++||++.+++..
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        334 PPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             CCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            1000 000  00123467789999999999999999999864

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.15  E-value=8.8e-11  Score=96.37  Aligned_cols=88  Identities=19%  Similarity=0.237  Sum_probs=60.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||......      ...... ....     ....  .........+.+
T Consensus       184 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------~~~~~~-~~~~-----~~~~--~~~~~~~~~l~~  249 (297)
T cd06659         184 MAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV------QAMKRL-RDSP-----PPKL--KNAHKISPVLRD  249 (297)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHH-hccC-----CCCc--cccCCCCHHHHH
Confidence            5899998888999999999999999999999998532211      000010 0000     0000  001112346889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|++||++.+|+..
T Consensus       250 ~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         250 FLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHHHHhcCCcccCcCHHHHhhC
Confidence            9999999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.14  E-value=4e-11  Score=96.42  Aligned_cols=89  Identities=21%  Similarity=0.340  Sum_probs=57.7

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||++.   .+.++.++|||||||+++|+++|+.|+........      ..... ...   ...+....  ....+..
T Consensus       173 ~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~------~~~~~-~~~---~~~~~~~~--~~~~~~~  240 (267)
T cd06645         173 MAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA------LFLMT-KSN---FQPPKLKD--KMKWSNS  240 (267)
T ss_pred             cChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh------HHhhh-ccC---CCCCcccc--cCCCCHH
Confidence            6899874   45688999999999999999999998753221110      00000 000   00011100  0012346


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +.+++.+||+.+|++||++.+|+.
T Consensus       241 ~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         241 FHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             HHHHHHHHccCCchhCcCHHHHhc
Confidence            889999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.14  E-value=2.2e-11  Score=112.64  Aligned_cols=83  Identities=22%  Similarity=0.299  Sum_probs=57.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+|+||++|..|+....        .......     ...+.+..     .........
T Consensus       182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--------~~~~~~~-----~~~~~~~~-----~~~~~~~~~  243 (793)
T PLN00181        182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--------RTMSSLR-----HRVLPPQI-----LLNWPKEAS  243 (793)
T ss_pred             EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--------HHHHHHH-----HhhcChhh-----hhcCHHHHH
Confidence            69999999999999999999999999999877753110        0000000     00111111     111224567


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|.+||++.+|++
T Consensus       244 ~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        244 FCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             HHHHhCCCChhhCcChHHHhh
Confidence            889999999999999999975

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.14  E-value=4.4e-11  Score=99.57  Aligned_cols=86  Identities=16%  Similarity=0.265  Sum_probs=59.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++|+++|+.||.............+........        ..  ..+......+..
T Consensus       163 ~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------~~--~~p~~~~~~~~~  232 (327)
T cd05617         163 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--------PI--RIPRFLSVKASH  232 (327)
T ss_pred             CCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--------CC--CCCCCCCHHHHH
Confidence            68999998999999999999999999999999996543322222222222221111        00  112223346789


Q ss_pred             HHHHhhccCCCCCCCH
Q 028061           81 IALLCTNASPSLRPTM   96 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~   96 (214)
                      ++.+||+.+|++|+++
T Consensus       233 li~~~L~~dP~~R~~~  248 (327)
T cd05617         233 VLKGFLNKDPKERLGC  248 (327)
T ss_pred             HHHHHhccCHHHcCCC
Confidence            9999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.14  E-value=4.7e-11  Score=96.81  Aligned_cols=99  Identities=14%  Similarity=0.055  Sum_probs=58.4

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc-----------CccccccCCcc--
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS-----------GTLMEFVDPRL--   66 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~--   66 (214)
                      +|||++..+ .++.++||||||++++|+++|+.||.......  .+..........           ...........  
T Consensus       166 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (283)
T cd07835         166 RAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID--QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQ  243 (283)
T ss_pred             CCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHHhhhhhhchhhhhhccccccc
Confidence            689987654 57899999999999999999999985322110  000000000000           00000000000  


Q ss_pred             -CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           67 -GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        67 -~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                       ...........+.+++.+||+.+|++||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         244 DLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             chhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence             00001112246889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.13  E-value=3.8e-11  Score=96.30  Aligned_cols=88  Identities=15%  Similarity=0.237  Sum_probs=61.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ++||++....++.++|+|+||++++|+++|..||.......    ....         ..+.+.......+......+..
T Consensus       159 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~---------~~~~~~~~~~~~~~~~~~~~~~  225 (262)
T cd05572         159 VAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIY---------NDILKGNGKLEFPNYIDKAAKD  225 (262)
T ss_pred             cChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHH---------HHHhccCCCCCCCcccCHHHHH
Confidence            58999888889999999999999999999999986433210    1111         1111111111223333558999


Q ss_pred             HHHHhhccCCCCCCC-----HHHHHH
Q 028061           81 IALLCTNASPSLRPT-----MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs-----~~~v~~  101 (214)
                      ++.+||+.+|++||+     +.++++
T Consensus       226 ~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         226 LIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             HHHHHccCChhhCcCCcccCHHHHhc
Confidence            999999999999999     666654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.13  E-value=2.1e-11  Score=101.11  Aligned_cols=83  Identities=18%  Similarity=0.245  Sum_probs=58.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++|+++|+.||......      ...... ..      ..+    ..+......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~------~~~~~i-~~------~~~----~~~~~~~~~~~~  225 (316)
T cd05619         163 IAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE------ELFQSI-RM------DNP----CYPRWLTREAKD  225 (316)
T ss_pred             cCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH------HHHHHH-Hh------CCC----CCCccCCHHHHH
Confidence            6899998889999999999999999999999998632211      111010 00      011    112223346889


Q ss_pred             HHHHhhccCCCCCCCHH-HHH
Q 028061           81 IALLCTNASPSLRPTMS-EVV  100 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~-~v~  100 (214)
                      ++.+||+.+|++||++. +++
T Consensus       226 li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         226 ILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             HHHHHhccCHhhcCCChHHHH
Confidence            99999999999999997 553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.13  E-value=1.7e-11  Score=101.84  Aligned_cols=84  Identities=18%  Similarity=0.206  Sum_probs=59.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.++.++.++|||||||+++|+++|+.||.......      .. ..        +.....  ..+......+.+
T Consensus       162 ~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------~~-~~--------~~~~~~--~~p~~~~~~~~~  224 (323)
T cd05595         162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER------LF-EL--------ILMEEI--RFPRTLSPEAKS  224 (323)
T ss_pred             CCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH------HH-HH--------HhcCCC--CCCCCCCHHHHH
Confidence            69999998999999999999999999999999985322110      00 00        000000  112223447889


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      ++.+||+.+|++|+     ++.++++
T Consensus       225 li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         225 LLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             HHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            99999999999998     7777764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.13  E-value=1.4e-11  Score=102.34  Aligned_cols=84  Identities=18%  Similarity=0.192  Sum_probs=59.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++|+++|+.||......      ....         .+.....  ..+......+.+
T Consensus       167 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~------~~~~---------~~~~~~~--~~~~~~~~~~~~  229 (323)
T cd05584         167 MAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK------KTID---------KILKGKL--NLPPYLTPEARD  229 (323)
T ss_pred             cChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH------HHHH---------HHHcCCC--CCCCCCCHHHHH
Confidence            6899998888999999999999999999999998632211      1111         1111111  112223347889


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      ++.+||+.+|++||     ++.+++.
T Consensus       230 li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         230 LLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            99999999999999     7777764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.13  E-value=7.8e-11  Score=97.13  Aligned_cols=37  Identities=22%  Similarity=0.302  Sum_probs=32.3

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYV   37 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~   37 (214)
                      ||||++.+ ..++.++|||||||+++|+++|+.||...
T Consensus       182 ~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             cCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            68998876 45899999999999999999999998643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.13  E-value=2.9e-11  Score=97.88  Aligned_cols=98  Identities=19%  Similarity=0.249  Sum_probs=59.1

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC------cc-----ccccCCc---
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG------TL-----MEFVDPR---   65 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~-----~~~~~~~---   65 (214)
                      +|||.+.+ ..++.++||||||++++|+++|+.||.......   ............      ..     .....+.   
T Consensus       168 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (287)
T cd07840         168 RPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE---QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPY  244 (287)
T ss_pred             CCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCchhhccccccchhhhhccccccc
Confidence            58997764 467899999999999999999999986432211   011111100000      00     0000000   


Q ss_pred             ---cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           66 ---LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        66 ---~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                         +.......++..+.+++.+||..+|++||++.+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         245 KRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             hhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence               000000112457899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.13  E-value=2.1e-11  Score=101.27  Aligned_cols=78  Identities=18%  Similarity=0.233  Sum_probs=55.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++|+++|+.||......      ......         .....  ..+...+..+..
T Consensus       168 ~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~------~~~~~i---------~~~~~--~~p~~~~~~~~~  230 (324)
T cd05589         168 LAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE------EVFDSI---------VNDEV--RYPRFLSREAIS  230 (324)
T ss_pred             cCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH------HHHHHH---------HhCCC--CCCCCCCHHHHH
Confidence            6999999889999999999999999999999998532211      111111         11000  112223447889


Q ss_pred             HHHHhhccCCCCCCC
Q 028061           81 IALLCTNASPSLRPT   95 (214)
Q Consensus        81 l~~~C~~~~p~~RPs   95 (214)
                      ++.+||+.+|.+||+
T Consensus       231 li~~~L~~dP~~R~~  245 (324)
T cd05589         231 IMRRLLRRNPERRLG  245 (324)
T ss_pred             HHHHHhhcCHhHcCC
Confidence            999999999999995

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.13  E-value=2.8e-11  Score=109.92  Aligned_cols=87  Identities=15%  Similarity=0.134  Sum_probs=61.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCcc-CCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRL-GSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   79 (214)
                      ||||++.+..++.++|||||||++||+++|+.||.....      ..+...         ++.... .+.........+.
T Consensus       547 ~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~------~~~~~~---------il~~~~~~p~~~~~~~~~~~  611 (669)
T cd05610         547 LAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETP------QQVFQN---------ILNRDIPWPEGEEKLSVNAQ  611 (669)
T ss_pred             cCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH------HHHHHH---------HHhcCCCCCcccccCCHHHH
Confidence            699999988899999999999999999999999863221      111111         111111 0111112344678


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      .++.+||..+|.+||++.+++..
T Consensus       612 ~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         612 NAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             HHHHHHcccChhHCcCHHHHHhC
Confidence            89999999999999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.13  E-value=8e-11  Score=95.25  Aligned_cols=98  Identities=18%  Similarity=0.179  Sum_probs=59.9

Q ss_pred             Ccccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh-----------cCccccccCCccCC
Q 028061            1 MAPEYAL-WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ-----------SGTLMEFVDPRLGS   68 (214)
Q Consensus         1 mAPE~~~-~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~   68 (214)
                      +|||++. .+.++.++|||||||+++|+++|..||......+   ..........           .........+....
T Consensus       165 ~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (282)
T cd07831         165 RAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD---QIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKG  241 (282)
T ss_pred             CChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH---HHHHHHHHcCCCCHHHHHhhcccccccccCccccc
Confidence            5899765 4567899999999999999999999985432111   1111111000           00000000000000


Q ss_pred             ----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 ----EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                          ......+..+.+++.+||+.+|++||++.+++.
T Consensus       242 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         242 TGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             ccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence                001123568999999999999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.13  E-value=1e-11  Score=103.11  Aligned_cols=84  Identities=18%  Similarity=0.207  Sum_probs=60.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||......      . .......+      +.    ..+......+.+
T Consensus       162 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~------~-~~~~~~~~------~~----~~p~~~~~~~~~  224 (323)
T cd05571         162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------K-LFELILME------EI----RFPRTLSPEAKS  224 (323)
T ss_pred             cChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH------H-HHHHHHcC------CC----CCCCCCCHHHHH
Confidence            6899999889999999999999999999999998532110      0 00100000      01    112223447889


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      ++.+||+.||++||     ++.++++
T Consensus       225 li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         225 LLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             HHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            99999999999999     7888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.12  E-value=3.7e-11  Score=97.43  Aligned_cols=99  Identities=15%  Similarity=0.156  Sum_probs=59.3

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHH----------HhhcCccc-cccCCccCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFH----------LHQSGTLM-EFVDPRLGS   68 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~----------~~~~~~~~-~~~~~~~~~   68 (214)
                      +|||++.+ ..++.++||||||++++|+++|+.||......+.  +......          ........ ....+....
T Consensus       167 ~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (286)
T cd07847         167 RAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ--LYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPET  244 (286)
T ss_pred             CCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCChHHhhhcccccccccccCCCccc
Confidence            58998765 5688999999999999999999999864322110  0000000          00000000 000000000


Q ss_pred             CCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 EFN-----KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+     ......+.+++.+||+.+|++||++.+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         245 REPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             ccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            000     112356889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.12  E-value=2.8e-11  Score=96.65  Aligned_cols=87  Identities=16%  Similarity=0.208  Sum_probs=60.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHH--HHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKV--EAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~   78 (214)
                      ++||++.....+.++||||||++++|+++|+.||......      ....... .+        ..  ..+..  .+..+
T Consensus       168 ~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~~-~~--------~~--~~~~~~~~~~~~  230 (265)
T cd05579         168 IAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE------EIFQNIL-NG--------KI--EWPEDVEVSDEA  230 (265)
T ss_pred             cCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHh-cC--------Cc--CCCccccCCHHH
Confidence            5789888888899999999999999999999998532211      1111110 00        00  11111  24578


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      ..++.+||+.+|++||++..+.+.|+
T Consensus       231 ~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         231 IDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             HHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            99999999999999999966666554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.12  E-value=5.3e-11  Score=99.16  Aligned_cols=90  Identities=17%  Similarity=0.259  Sum_probs=60.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC--CCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSN--CTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||++.+..++.++|||||||+++|+++|+.||.......  ......+.........        .  ..+......+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~p~~~~~~~  232 (329)
T cd05588         163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ--------I--RIPRSLSVKA  232 (329)
T ss_pred             cCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC--------C--CCCCCCCHHH
Confidence            68999998899999999999999999999999996432221  1111122222111111        1  1122233468


Q ss_pred             HHHHHHhhccCCCCCCC------HHHHH
Q 028061           79 IKIALLCTNASPSLRPT------MSEVV  100 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs------~~~v~  100 (214)
                      ..++.+||+.+|.+|++      +.+++
T Consensus       233 ~~li~~~L~~dP~~R~~~~~~~~~~~i~  260 (329)
T cd05588         233 SSVLKGFLNKDPKERLGCHPQTGFRDIK  260 (329)
T ss_pred             HHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence            89999999999999997      55665

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.12  E-value=4.9e-11  Score=96.64  Aligned_cols=87  Identities=21%  Similarity=0.257  Sum_probs=57.9

Q ss_pred             Cccccccc----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHH
Q 028061            1 MAPEYALW----GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAE   76 (214)
Q Consensus         1 mAPE~~~~----~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (214)
                      +|||++..    ..++.++|+||||++++|+++|+.||......    ... ....      .....+...   ....+.
T Consensus       170 ~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~-~~~~------~~~~~~~~~---~~~~~~  235 (283)
T cd06617         170 MAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP----FQQ-LKQV------VEEPSPQLP---AEKFSP  235 (283)
T ss_pred             cChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC----HHH-HHHH------HhcCCCCCC---ccccCH
Confidence            58998754    45688999999999999999999998532111    000 0000      000111110   112345


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           77 RMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        77 ~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+..++.+||..+|++||++.+|+.
T Consensus       236 ~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         236 EFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            7899999999999999999999975

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.12  E-value=2.5e-11  Score=97.20  Aligned_cols=91  Identities=15%  Similarity=0.074  Sum_probs=60.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+.+..++.++||||||++++|+++|..||......      ... .....+..      .........++..+.+
T Consensus       160 ~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~-~~~~~~~~------~~~~~~~~~~~~~~~~  226 (260)
T cd05611         160 LAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD------AVF-DNILSRRI------NWPEEVKEFCSPEAVD  226 (260)
T ss_pred             cChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH------HHH-HHHHhccc------CCCCcccccCCHHHHH
Confidence            5899988878899999999999999999999998532211      111 11101100      0011111224457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHh
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      ++.+||+.+|++||++.++.+.|+
T Consensus       227 ~i~~~l~~~p~~R~~~~~~~~~l~  250 (260)
T cd05611         227 LINRLLCMDPAKRLGANGYQEIKS  250 (260)
T ss_pred             HHHHHccCCHHHccCCCcHHHHHc
Confidence            999999999999998765555443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.12  E-value=5.3e-11  Score=93.37  Aligned_cols=86  Identities=21%  Similarity=0.166  Sum_probs=59.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCH--HHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNK--VEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   78 (214)
                      ++||.+....++.++|||+||++++|+++|..||.......     . ....         +..........  ..+..+
T Consensus       153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~-----~-~~~~---------~~~~~~~~~~~~~~~~~~~  217 (244)
T smart00220      153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL-----E-LFKK---------IGKPKPPFPPPEWKISPEA  217 (244)
T ss_pred             CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH-----H-HHHH---------HhccCCCCccccccCCHHH
Confidence            57998888888999999999999999999999885321110     0 0011         11100000000  034578


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+++.+||..+|++||++.++++
T Consensus       218 ~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      218 KDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHHccCCchhccCHHHHhh
Confidence            99999999999999999999985

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.12  E-value=8.7e-11  Score=95.28  Aligned_cols=98  Identities=13%  Similarity=0.120  Sum_probs=57.5

Q ss_pred             CcccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---------------ccccccCC
Q 028061            1 MAPEYALWGY-LTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---------------TLMEFVDP   64 (214)
Q Consensus         1 mAPE~~~~~~-~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~   64 (214)
                      +|||++.+.. ++.++||||||++++|+++|+.||.......  .+...........               .+......
T Consensus       167 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
T cd07860         167 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQ  244 (284)
T ss_pred             cCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhhhhHHHHHHhhccccccc
Confidence            5899877544 6889999999999999999999985322110  0000000000000               00000000


Q ss_pred             ccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           65 RLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        65 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+. .........+.+++.+||+.||++||++.+++.
T Consensus       245 ~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         245 DFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             CHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            000 000112346788999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.11  E-value=3.3e-11  Score=101.27  Aligned_cols=102  Identities=19%  Similarity=0.115  Sum_probs=61.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCc---------hhHH-------HHHHhhc-Cccc----
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC---------PLDW-------AFHLHQS-GTLM----   59 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~---------~~~~-------~~~~~~~-~~~~----   59 (214)
                      +|||++.+..++.++|||||||+++||++|+.||..........         ...+       ....... ....    
T Consensus       185 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (355)
T cd07874         185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTF  264 (355)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccc
Confidence            68999988899999999999999999999999986432110000         0000       0000000 0000    


Q ss_pred             -cccCCccC---CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           60 -EFVDPRLG---SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        60 -~~~~~~~~---~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                       ........   ..........+.+++.+|++.||++||++.+++..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         265 PKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             hhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence             00000000   01111123467899999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.11  E-value=2.6e-11  Score=100.51  Aligned_cols=81  Identities=16%  Similarity=0.165  Sum_probs=57.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++|+++|+.||......      ....... .      ..    ...+......+..
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~------~~~~~i~-~------~~----~~~~~~~~~~~~~  225 (316)
T cd05592         163 IAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED------ELFDSIL-N------DR----PHFPRWISKEAKD  225 (316)
T ss_pred             cCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH------HHHHHHH-c------CC----CCCCCCCCHHHHH
Confidence            6899998888999999999999999999999998632211      1111110 0      00    1122223446889


Q ss_pred             HHHHhhccCCCCCCCHHH
Q 028061           81 IALLCTNASPSLRPTMSE   98 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~   98 (214)
                      ++.+||+.+|.+||++.+
T Consensus       226 ll~~~l~~~P~~R~~~~~  243 (316)
T cd05592         226 CLSKLFERDPTKRLGVDG  243 (316)
T ss_pred             HHHHHccCCHHHcCCChH
Confidence            999999999999998753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.11  E-value=1.7e-11  Score=102.10  Aligned_cols=84  Identities=17%  Similarity=0.138  Sum_probs=58.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||.....      .... ..        +.....  ..+......+.+
T Consensus       182 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~-~~--------i~~~~~--~~p~~~~~~~~~  244 (329)
T PTZ00263        182 LAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP------FRIY-EK--------ILAGRL--KFPNWFDGRARD  244 (329)
T ss_pred             cCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH------HHHH-HH--------HhcCCc--CCCCCCCHHHHH
Confidence            689999988899999999999999999999999853211      0000 11        111111  111123346889


Q ss_pred             HHHHhhccCCCCCCC-----HHHHHH
Q 028061           81 IALLCTNASPSLRPT-----MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs-----~~~v~~  101 (214)
                      ++.+||+.||.+|++     +.+++.
T Consensus       245 li~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        245 LVKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             HHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            999999999999987     566653

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.11  E-value=1.7e-10  Score=97.20  Aligned_cols=102  Identities=17%  Similarity=0.116  Sum_probs=61.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCC------------chhHH----HHHHhhcC-cc-----
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCT------------CPLDW----AFHLHQSG-TL-----   58 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~------------~~~~~----~~~~~~~~-~~-----   58 (214)
                      +|||++.+..++.++|||||||+++|+++|+.||.........            .+...    ........ ..     
T Consensus       189 ~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (359)
T cd07876         189 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISF  268 (359)
T ss_pred             CCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcch
Confidence            6899999889999999999999999999999999643211000            00000    00000000 00     


Q ss_pred             ccccCCccC---CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           59 MEFVDPRLG---SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        59 ~~~~~~~~~---~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      .+.......   ..........+.+++.+||+.||++||++.+++..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         269 EELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             hhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence            000000000   00011123467899999999999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.11  E-value=2.5e-11  Score=100.56  Aligned_cols=83  Identities=18%  Similarity=0.224  Sum_probs=58.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++|||||||+++||++|+.||......      ... .....      ..+.    .+......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~------~~~-~~~~~------~~~~----~~~~~~~~~~~  225 (316)
T cd05620         163 IAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED------ELF-ESIRV------DTPH----YPRWITKESKD  225 (316)
T ss_pred             cCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH------HHH-HHHHh------CCCC----CCCCCCHHHHH
Confidence            6899999889999999999999999999999998532211      000 10000      0111    11123347889


Q ss_pred             HHHHhhccCCCCCCCHH-HHH
Q 028061           81 IALLCTNASPSLRPTMS-EVV  100 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~-~v~  100 (214)
                      ++.+||+.||++||++. +++
T Consensus       226 li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         226 ILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHHHHccCCHHHcCCChHHHH
Confidence            99999999999999984 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.11  E-value=9.8e-11  Score=94.85  Aligned_cols=101  Identities=16%  Similarity=0.151  Sum_probs=58.7

Q ss_pred             Ccccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCc----------hhHHHHHHhhcCccccccCCccC--
Q 028061            1 MAPEYAL-WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC----------PLDWAFHLHQSGTLMEFVDPRLG--   67 (214)
Q Consensus         1 mAPE~~~-~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~--   67 (214)
                      +|||++. ...++.++||||||++++|+++|+.||..........          ...|.............+.....  
T Consensus       165 ~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T cd07830         165 RAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTS  244 (283)
T ss_pred             cCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccccccc
Confidence            5899875 4567899999999999999999998885432211000          00000000000000000000000  


Q ss_pred             -CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 -SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 -~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                       ..........+..++.+||+.+|++||++.+++.
T Consensus       245 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         245 LHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             HHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence             0000111357899999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.11  E-value=2.2e-10  Score=97.88  Aligned_cols=101  Identities=13%  Similarity=0.138  Sum_probs=60.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCc----hhHHHHHHhhc----------Cccc----c--
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC----PLDWAFHLHQS----------GTLM----E--   60 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~----~~~~~~~~~~~----------~~~~----~--   60 (214)
                      +|||++....++.++|||||||+++|+++|+.|+..........    ....+......          ..+.    .  
T Consensus       250 ~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~  329 (391)
T PHA03212        250 NAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLA  329 (391)
T ss_pred             CChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHH
Confidence            58999998899999999999999999999998764322111000    00000000000          0000    0  


Q ss_pred             ---ccCCccCCCCC--HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           61 ---FVDPRLGSEFN--KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        61 ---~~~~~~~~~~~--~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                         ...+.....+.  ...+..+..|+.+||+.||.+||++.+++.
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        330 KKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             hccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence               00000011110  123457889999999999999999999985

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.10  E-value=5.7e-10  Score=99.99  Aligned_cols=94  Identities=15%  Similarity=0.173  Sum_probs=72.0

Q ss_pred             cccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            2 APEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         2 APE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      |||++.   +...++|+|||++||+||-|+....||....                   -..|++..+.=+..+.....+
T Consensus       223 sPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg-------------------~laIlng~Y~~P~~p~ys~~l  283 (738)
T KOG1989|consen  223 SPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG-------------------KLAILNGNYSFPPFPNYSDRL  283 (738)
T ss_pred             ChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc-------------------ceeEEeccccCCCCccHHHHH
Confidence            788765   5678999999999999999999999996321                   233444444222234567789


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHhcCCCCCCCCC
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIP  114 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~~~~~~  114 (214)
                      ..|+..||+.+|++||++-||+..+..+.+.+...+
T Consensus       284 ~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~  319 (738)
T KOG1989|consen  284 KDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIP  319 (738)
T ss_pred             HHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCcc
Confidence            999999999999999999999998887766554433

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.10  E-value=9.8e-11  Score=95.43  Aligned_cols=88  Identities=18%  Similarity=0.198  Sum_probs=58.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++|||||||+++|+++|+.||........   .......     +... .    ...+......+.+
T Consensus       168 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~---~~~~~~~-----~~~~-~----~~~~~~~~~~~~~  234 (285)
T cd05632         168 MAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK---REEVDRR-----VLET-E----EVYSAKFSEEAKS  234 (285)
T ss_pred             cChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHh-----hhcc-c----cccCccCCHHHHH
Confidence            689999888999999999999999999999999864321110   0000000     0000 0    0112223346889


Q ss_pred             HHHHhhccCCCCCCC-----HHHHHH
Q 028061           81 IALLCTNASPSLRPT-----MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs-----~~~v~~  101 (214)
                      ++.+||+.+|++||+     +.+++.
T Consensus       235 li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         235 ICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             HHHHHccCCHhHcCCCcccChHHHHc
Confidence            999999999999999     555553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.10  E-value=6e-11  Score=100.09  Aligned_cols=99  Identities=18%  Similarity=0.156  Sum_probs=61.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHH-------------------h-hcCccc-
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHL-------------------H-QSGTLM-   59 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~-------------------~-~~~~~~-   59 (214)
                      +|||++.+..++.++|||||||+++|+++|+.||.......   ....+...                   . ...... 
T Consensus       192 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (364)
T cd07875         192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID---QWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG  268 (364)
T ss_pred             CCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCC
Confidence            68999998899999999999999999999999986432111   00000000                   0 000000 


Q ss_pred             ----cccCCcc---CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           60 ----EFVDPRL---GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        60 ----~~~~~~~---~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                          .......   ...........+.+++.+|++.||.+||++.+++..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             CChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                0000000   000011123467899999999999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.10  E-value=1.3e-10  Score=96.01  Aligned_cols=36  Identities=22%  Similarity=0.329  Sum_probs=32.1

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      ||||++.+ ..++.++||||+||+++|+++|+.||..
T Consensus       182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             cCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence            68998876 4689999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.10  E-value=2.7e-11  Score=100.54  Aligned_cols=79  Identities=15%  Similarity=0.220  Sum_probs=56.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++|+++|+.||......      ... ...        .....  ..+......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~------~~~-~~i--------~~~~~--~~~~~~~~~~~~  225 (320)
T cd05590         163 IAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED------DLF-EAI--------LNDEV--VYPTWLSQDAVD  225 (320)
T ss_pred             cCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH------HHH-HHH--------hcCCC--CCCCCCCHHHHH
Confidence            6899999889999999999999999999999999632211      111 110        11000  111123347889


Q ss_pred             HHHHhhccCCCCCCCH
Q 028061           81 IALLCTNASPSLRPTM   96 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~   96 (214)
                      ++.+||+.||++||++
T Consensus       226 li~~~L~~dP~~R~~~  241 (320)
T cd05590         226 ILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHHHHcccCHHHCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.10  E-value=5.8e-11  Score=96.91  Aligned_cols=98  Identities=12%  Similarity=0.143  Sum_probs=59.6

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh------------cCccccccCCccC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ------------SGTLMEFVDPRLG   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~   67 (214)
                      ||||++.+ ..++.++||||+||+++|+++|+.||......+   ..........            ........-+...
T Consensus       170 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (288)
T cd07871         170 RPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE---ELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYR  246 (288)
T ss_pred             cChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHHhhccccchhhhccccCccC
Confidence            68998865 568999999999999999999999986432211   0110000000            0000111111100


Q ss_pred             CC----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 SE----FNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ~~----~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..    ..........+++.+|++.||.+||++.++++
T Consensus       247 ~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         247 AQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             CCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            00    00112346789999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.09  E-value=2.5e-11  Score=100.75  Aligned_cols=79  Identities=16%  Similarity=0.272  Sum_probs=56.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++|+++|+.||......      .....         +.....  .++......+..
T Consensus       168 ~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~------~~~~~---------i~~~~~--~~p~~~s~~~~~  230 (323)
T cd05616         168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQS---------IMEHNV--AYPKSMSKEAVA  230 (323)
T ss_pred             cCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH------HHHHH---------HHhCCC--CCCCcCCHHHHH
Confidence            6899999999999999999999999999999999632211      11111         111111  122233457889


Q ss_pred             HHHHhhccCCCCCCCH
Q 028061           81 IALLCTNASPSLRPTM   96 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~   96 (214)
                      ++.+|++.+|.+|++.
T Consensus       231 li~~~l~~~p~~R~~~  246 (323)
T cd05616         231 ICKGLMTKHPGKRLGC  246 (323)
T ss_pred             HHHHHcccCHHhcCCC
Confidence            9999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.09  E-value=2.3e-11  Score=100.94  Aligned_cols=84  Identities=14%  Similarity=0.167  Sum_probs=59.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||......      ......         .....  ..+......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~------~~~~~i---------~~~~~--~~p~~~~~~~~~  225 (321)
T cd05591         163 IAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED------DLFESI---------LHDDV--LYPVWLSKEAVS  225 (321)
T ss_pred             cCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH------HHHHHH---------HcCCC--CCCCCCCHHHHH
Confidence            6899998889999999999999999999999999643211      111111         11100  111113347889


Q ss_pred             HHHHhhccCCCCCC-------CHHHHHH
Q 028061           81 IALLCTNASPSLRP-------TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-------s~~~v~~  101 (214)
                      ++.+||+.+|++||       ++.+++.
T Consensus       226 ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         226 ILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             HHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence            99999999999999       6666653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=7.7e-11  Score=95.47  Aligned_cols=88  Identities=22%  Similarity=0.295  Sum_probs=58.3

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      +|||++.     ...++.++||||||+++||+++|+.||......      ...... ..+     ..+.+  ..+....
T Consensus       170 ~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~------~~~~~~-~~~-----~~~~~--~~~~~~~  235 (280)
T cd06611         170 MAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM------RVLLKI-LKS-----EPPTL--DQPSKWS  235 (280)
T ss_pred             cCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH------HHHHHH-hcC-----CCCCc--CCcccCC
Confidence            5788874     345678999999999999999999998532211      111111 000     00111  1112234


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ..+.+++.+||+.+|.+||++.+|++.
T Consensus       236 ~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         236 SSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            478899999999999999999999753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.09  E-value=4.5e-11  Score=99.81  Aligned_cols=102  Identities=20%  Similarity=0.168  Sum_probs=62.1

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHh-----------hcCcccccc------
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLH-----------QSGTLMEFV------   62 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~------   62 (214)
                      +|||.+.. ..++.++|||||||+++|+++|+.||.......   .........           ........+      
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (337)
T cd07858         175 RAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH---QLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYT  251 (337)
T ss_pred             cChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH---HHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcc
Confidence            58998764 468899999999999999999999985321100   000000000           000000000      


Q ss_pred             -CCccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH--HhcC
Q 028061           63 -DPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM--LEGS  106 (214)
Q Consensus        63 -~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~--L~~~  106 (214)
                       +.... .........+.+++.+||+.+|++||++.+++..  ++..
T Consensus       252 ~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         252 PRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             cccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence             00000 0011234578899999999999999999999865  5543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.09  E-value=7.8e-11  Score=98.20  Aligned_cols=86  Identities=17%  Similarity=0.284  Sum_probs=58.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCC--CchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNC--TCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||++.+..++.++|||||||+++|+++|+.||........  .....+........        ..  ..+......+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--------~~--~~p~~~~~~~  232 (329)
T cd05618         163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--------QI--RIPRSLSVKA  232 (329)
T ss_pred             cCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC--------CC--CCCCCCCHHH
Confidence            689999988999999999999999999999999964322111  11112222211111        11  1222334478


Q ss_pred             HHHHHHhhccCCCCCCCH
Q 028061           79 IKIALLCTNASPSLRPTM   96 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~   96 (214)
                      ..++.+||+.+|++||++
T Consensus       233 ~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         233 ASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             HHHHHHHhcCCHHHcCCC
Confidence            899999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.09  E-value=1.7e-10  Score=93.29  Aligned_cols=98  Identities=17%  Similarity=0.134  Sum_probs=59.3

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHH-----------HhhcCccccccCCccCC
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFH-----------LHQSGTLMEFVDPRLGS   68 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~   68 (214)
                      +|||++... .++.++||||||++++|+++|+.||.......   .......           ....-......-+....
T Consensus       165 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (282)
T cd07829         165 RAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID---QLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPP  241 (282)
T ss_pred             CChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHHHHhCCCcHHHHHhhcccccccccccccCc
Confidence            589988766 88999999999999999999988885322110   0000000           00000000000000000


Q ss_pred             ----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 ----EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                          ...+.....+.+++.+||..+|++||++.+|+.
T Consensus       242 ~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         242 KDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             cchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence                000112457899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.09  E-value=7.3e-11  Score=98.25  Aligned_cols=88  Identities=19%  Similarity=0.229  Sum_probs=58.4

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+. .++.++|||||||+++|+++|+.||........  .........       ..++.    .+......+.
T Consensus       173 ~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~~~~~~~~~-------~~~~~----~~~~~~~~~~  239 (332)
T cd05614         173 MAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT--QSEVSRRIL-------KCDPP----FPSFIGPEAQ  239 (332)
T ss_pred             cCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC--HHHHHHHHh-------cCCCC----CCCCCCHHHH
Confidence            689998764 478899999999999999999999964322211  011100000       01111    1222344788


Q ss_pred             HHHHHhhccCCCCCC-----CHHHHHH
Q 028061           80 KIALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      +++.+||+.+|++||     ++.++++
T Consensus       240 ~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         240 DLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             HHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            999999999999999     6666664

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.08  E-value=2.8e-11  Score=100.99  Aligned_cols=99  Identities=17%  Similarity=0.171  Sum_probs=59.5

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---ccccccCCc---------cC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---TLMEFVDPR---------LG   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---------~~   67 (214)
                      ||||++.. ..++.++|||||||+++|+++|+.||.......   ............   .+..+.+..         ..
T Consensus       176 ~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (336)
T cd07849         176 RAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH---QLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFK  252 (336)
T ss_pred             cChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcC
Confidence            68998654 568899999999999999999999985321100   000000000000   000000000         00


Q ss_pred             CCCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           68 SEFN-----KVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        68 ~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ...+     ......+.+++.+||+.+|++||++.+++..
T Consensus       253 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         253 PKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             CcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0000     1123468899999999999999999999875

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.08  E-value=6.1e-11  Score=94.89  Aligned_cols=86  Identities=19%  Similarity=0.112  Sum_probs=60.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++++++|..||.......    .......         ... .....+...+..+.+
T Consensus       166 ~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~---------~~~-~~~~~~~~~~~~~~~  231 (258)
T cd05578         166 MAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI----RDQIRAK---------QET-ADVLYPATWSTEAID  231 (258)
T ss_pred             cCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH----HHHHHHH---------hcc-ccccCcccCcHHHHH
Confidence            58999988889999999999999999999999986433210    1111111         000 011222233468899


Q ss_pred             HHHHhhccCCCCCCCH--HHHH
Q 028061           81 IALLCTNASPSLRPTM--SEVV  100 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~--~~v~  100 (214)
                      ++.+||+.+|.+||++  .+++
T Consensus       232 ~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         232 AINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             HHHHHccCChhHcCCccHHHHh
Confidence            9999999999999999  6554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.08  E-value=3.1e-11  Score=100.53  Aligned_cols=85  Identities=18%  Similarity=0.153  Sum_probs=60.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++|+++|+.||......      ... .....      ...    ..+......+..
T Consensus       162 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~------~~~-~~~~~------~~~----~~p~~~~~~~~~  224 (328)
T cd05593         162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLF-ELILM------EDI----KFPRTLSADAKS  224 (328)
T ss_pred             cChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH------HHH-HHhcc------CCc----cCCCCCCHHHHH
Confidence            6899999889999999999999999999999998532111      000 00000      011    112223447889


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~~  102 (214)
                      ++.+||+.+|.+|+     ++.++++.
T Consensus       225 li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         225 LLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            99999999999997     78888753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.08  E-value=6.6e-11  Score=97.07  Aligned_cols=98  Identities=12%  Similarity=0.151  Sum_probs=58.8

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc---Ccccccc---------CCccC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS---GTLMEFV---------DPRLG   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---------~~~~~   67 (214)
                      +|||++.+ ..++.++||||||++++||++|+.||.......   ....+......   .......         .+...
T Consensus       171 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (301)
T cd07873         171 RPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYR  247 (301)
T ss_pred             cCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCChhhchhhhccccccccccCccc
Confidence            58998764 457889999999999999999999986432211   01000000000   0000000         00000


Q ss_pred             CCC----CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 SEF----NKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ~~~----~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+    .......+.+++.+|++.+|.+||++.+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         248 ADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             cccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            000    0112346789999999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.08  E-value=4e-11  Score=99.58  Aligned_cols=79  Identities=16%  Similarity=0.266  Sum_probs=56.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++|||||||+++|+++|+.||......      ......         ....  ...+......+.+
T Consensus       168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~------~~~~~i---------~~~~--~~~~~~~~~~~~~  230 (324)
T cd05587         168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED------ELFQSI---------MEHN--VSYPKSLSKEAVS  230 (324)
T ss_pred             cChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHH---------HcCC--CCCCCCCCHHHHH
Confidence            6899999888999999999999999999999999632211      000011         0000  0112223347889


Q ss_pred             HHHHhhccCCCCCCCH
Q 028061           81 IALLCTNASPSLRPTM   96 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~   96 (214)
                      ++.+||+.+|.+|++.
T Consensus       231 li~~~l~~~P~~R~~~  246 (324)
T cd05587         231 ICKGLLTKHPAKRLGC  246 (324)
T ss_pred             HHHHHhhcCHHHcCCC
Confidence            9999999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.07  E-value=1.1e-10  Score=93.75  Aligned_cols=85  Identities=15%  Similarity=0.096  Sum_probs=59.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||......      ..         +............+......+.+
T Consensus       176 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~---------~~~~~~~~~~~~~p~~~~~~~~~  240 (264)
T cd06653         176 MSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM------AA---------IFKIATQPTKPMLPDGVSDACRD  240 (264)
T ss_pred             cCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH------HH---------HHHHHcCCCCCCCCcccCHHHHH
Confidence            5899998888899999999999999999999998532110      00         11111111112233444567999


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||. ++..||+..+++.
T Consensus       241 ~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         241 FLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             HHHHHhc-CcccCccHHHHhc
Confidence            9999999 5799999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.07  E-value=2.6e-10  Score=93.69  Aligned_cols=99  Identities=16%  Similarity=0.170  Sum_probs=58.4

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc---------cccccCCccCCCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT---------LMEFVDPRLGSEF   70 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~   70 (214)
                      ||||.+.+ ..++.++||||+||+++||++|+.||.......  ..............         .............
T Consensus       170 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (303)
T cd07869         170 RPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ--DQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYS  247 (303)
T ss_pred             CChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhCCCChhhccchhhccccccccccccC
Confidence            68998764 468899999999999999999999996432110  00011100000000         0000000000000


Q ss_pred             C---H------HHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           71 N---K------VEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        71 ~---~------~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +   .      .....+.+++.+|++.||++||++.+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         248 PKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             CccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            0   0      01235778999999999999999999975

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.07  E-value=2e-11  Score=102.17  Aligned_cols=88  Identities=17%  Similarity=0.092  Sum_probs=60.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++|||||||+++||++|+.||......      ........   ..    .....+.....+..+..
T Consensus       197 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~------~~~~~i~~---~~----~~~~~p~~~~~~~~~~~  263 (350)
T cd05573         197 IAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ------ETYNKIIN---WK----ESLRFPPDPPVSPEAID  263 (350)
T ss_pred             cCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH------HHHHHHhc---cC----CcccCCCCCCCCHHHHH
Confidence            6899999999999999999999999999999998643211      11111110   00    00000000113447889


Q ss_pred             HHHHhhccCCCCCCC-HHHHHHH
Q 028061           81 IALLCTNASPSLRPT-MSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs-~~~v~~~  102 (214)
                      ++.+|+. +|.+||+ +.+++..
T Consensus       264 li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         264 LICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HHHHHcc-ChhhcCCCHHHHhcC
Confidence            9999997 9999999 9999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.07  E-value=2.3e-10  Score=93.80  Aligned_cols=98  Identities=17%  Similarity=0.168  Sum_probs=58.0

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc---------CccccccCCccCCCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS---------GTLMEFVDPRLGSEF   70 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~   70 (214)
                      +|||++.+ ..++.++|||||||+++|+++|+.||.......   ...........         ..+....+.......
T Consensus       193 ~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (311)
T cd07866         193 RPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID---QLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNY  269 (311)
T ss_pred             CChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChhhchhhhhcccccccccCCCC
Confidence            57998765 358899999999999999999999985322211   00000000000         000000000000000


Q ss_pred             C-------HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           71 N-------KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        71 ~-------~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +       ......+.+++.+||+.+|++||++.+++.
T Consensus       270 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         270 PRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             CccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            0       012246889999999999999999998874

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.06  E-value=1.2e-10  Score=95.05  Aligned_cols=101  Identities=14%  Similarity=0.171  Sum_probs=59.3

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchh--------HHHHHHh------hcCccccccCCc
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPL--------DWAFHLH------QSGTLMEFVDPR   65 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~--------~~~~~~~------~~~~~~~~~~~~   65 (214)
                      ||||.+.+. .++.++|+||||++++|+++|+.||............        ...+...      ............
T Consensus       173 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (293)
T cd07843         173 RAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQ  252 (293)
T ss_pred             cCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchh
Confidence            689988654 4689999999999999999999998643221100000        0000000      000000000001


Q ss_pred             cCCCCCHH-HHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           66 LGSEFNKV-EAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        66 ~~~~~~~~-~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +...++.. ....+.+++.+||+.+|++||++.+++.
T Consensus       253 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         253 LRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             hhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence            11111111 2456889999999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.06  E-value=2.8e-10  Score=95.65  Aligned_cols=101  Identities=16%  Similarity=0.159  Sum_probs=61.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCC---------chhHHHHH-------HhhcC------cc
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCT---------CPLDWAFH-------LHQSG------TL   58 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~---------~~~~~~~~-------~~~~~------~~   58 (214)
                      +|||.+.+..++.++|||||||+++++++|+.||.........         ...++...       .....      .+
T Consensus       184 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
T cd07850         184 RAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSF  263 (353)
T ss_pred             cCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcch
Confidence            5899998889999999999999999999999998543211000         00000000       00000      00


Q ss_pred             ccccCCcc----CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           59 MEFVDPRL----GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        59 ~~~~~~~~----~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+......    ....+......+.+++.+||+.||++||++.+++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         264 EELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             hhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            00010000    00111123456889999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.06  E-value=4.3e-11  Score=100.17  Aligned_cols=103  Identities=16%  Similarity=0.208  Sum_probs=61.3

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHH-----------HhhcCccccccC--Ccc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFH-----------LHQSGTLMEFVD--PRL   66 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~--~~~   66 (214)
                      ||||++.. ..++.++|||||||+++|+++|+.||.......   .......           ..........+.  +..
T Consensus       181 ~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (342)
T cd07879         181 RAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD---QLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKY  257 (342)
T ss_pred             cChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCc
Confidence            68998875 468999999999999999999999986432110   0000000           000000000000  000


Q ss_pred             C-CCC---CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH--HhcC
Q 028061           67 G-SEF---NKVEAERMIKIALLCTNASPSLRPTMSEVVSM--LEGS  106 (214)
Q Consensus        67 ~-~~~---~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~--L~~~  106 (214)
                      . ...   .+.....+.+++.+||+.+|++||++.+++..  +++.
T Consensus       258 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         258 PRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             ccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence            0 000   01123467899999999999999999999853  5543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.06  E-value=1e-10  Score=99.03  Aligned_cols=99  Identities=13%  Similarity=0.139  Sum_probs=60.2

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc----------ccc-ccCCccCC
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT----------LME-FVDPRLGS   68 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~   68 (214)
                      +|||++.+. .++.++|||||||+++||++|+.||........   ...+........          ... +.......
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  247 (372)
T cd07853         171 RAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQ---LDLITDLLGTPSLEAMRSACEGARAHILRGPHKP  247 (372)
T ss_pred             CCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHH---HHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCC
Confidence            589988764 579999999999999999999999964332110   000000000000          000 00000000


Q ss_pred             -------CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           69 -------EFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        69 -------~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                             .........+.+++.+||+.||++||++.+++..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         248 PSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             CchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence                   0111124468899999999999999999999863

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.06  E-value=1.3e-10  Score=95.17  Aligned_cols=87  Identities=20%  Similarity=0.217  Sum_probs=59.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|..||......      ......      ...+.+...  ........+..
T Consensus       183 ~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~------~~~~~~------~~~~~~~~~--~~~~~~~~l~~  248 (292)
T cd06657         183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL------KAMKMI------RDNLPPKLK--NLHKVSPSLKG  248 (292)
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHH------HhhCCcccC--CcccCCHHHHH
Confidence            5899888888899999999999999999999998532111      000000      001111110  01112336788


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|.+||++.+++.
T Consensus       249 li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         249 FLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHHHHHhCCcccCcCHHHHhc
Confidence            999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.05  E-value=1.2e-10  Score=92.50  Aligned_cols=85  Identities=19%  Similarity=0.335  Sum_probs=59.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.....+.++|||++|++++|+++|+.|+......      ...+... ..     ..    ...+......+..
T Consensus       166 ~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~------~~~~~~~-~~-----~~----~~~~~~~~~~~~~  229 (254)
T cd06627         166 MAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM------AALFRIV-QD-----DH----PPLPEGISPELKD  229 (254)
T ss_pred             cCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHh-cc-----CC----CCCCCCCCHHHHH
Confidence            5899888777899999999999999999999998532210      0011110 00     01    1112223457889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||..+|++||++.+++.
T Consensus       230 ~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         230 FLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHhCChhhCcCHHHHhc
Confidence            999999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.05  E-value=8.7e-11  Score=97.51  Aligned_cols=105  Identities=17%  Similarity=0.157  Sum_probs=64.2

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHh-----------hcCccccccCC-ccC
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLH-----------QSGTLMEFVDP-RLG   67 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~-~~~   67 (214)
                      +|||++... .++.++||||||++++++++|+.||.......   .........           ........+.. ...
T Consensus       173 ~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (330)
T cd07834         173 RAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID---QLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKK  249 (330)
T ss_pred             CCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHhcCCCChhHhhhccccchhhHHhhcccC
Confidence            589998877 88999999999999999999999986432211   000000000           00000000000 000


Q ss_pred             CC-----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH--HhcCCC
Q 028061           68 SE-----FNKVEAERMIKIALLCTNASPSLRPTMSEVVSM--LEGSSN  108 (214)
Q Consensus        68 ~~-----~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~--L~~~~~  108 (214)
                      ..     .....+..+.+++.+||+.+|.+||++.+++..  +++...
T Consensus       250 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         250 PKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             CcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence            00     011134578899999999999999999999863  554443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.05  E-value=1.1e-10  Score=95.82  Aligned_cols=95  Identities=17%  Similarity=0.114  Sum_probs=57.2

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc---C------------------cc
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS---G------------------TL   58 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~------------------~~   58 (214)
                      +|||++.+. .++.++||||||++++|+++|+.||.......   ...........   .                  ..
T Consensus       190 ~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (310)
T cd07865         190 RPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH---QLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQ  266 (310)
T ss_pred             cCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChhhcccccchhhhhhccCCCcc
Confidence            589987654 47889999999999999999998885432111   00100010000   0                  00


Q ss_pred             ccccCCccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           59 MEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ...+...+.   +......+.+++.+||..+|.+||++.+++.
T Consensus       267 ~~~~~~~l~---~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         267 KRKVKERLK---PYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             chhhHHhcc---cccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            000000000   0011235678999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.05  E-value=1.3e-10  Score=95.04  Aligned_cols=97  Identities=22%  Similarity=0.193  Sum_probs=58.3

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---ccccc--------cCC----
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---TLMEF--------VDP----   64 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--------~~~----   64 (214)
                      +|||.+.. ..++.++|||||||+++|+++|+.||.......   ............   ....+        .++    
T Consensus       184 ~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (302)
T cd07864         184 RPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA---QLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQY  260 (302)
T ss_pred             cChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChhhccccccccccccccccccc
Confidence            57997764 457899999999999999999999886322110   000000000000   00000        000    


Q ss_pred             --ccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           65 --RLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        65 --~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                        ..... ....+..+.+++.+||+.+|.+||++.+|+.
T Consensus       261 ~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         261 RRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             ccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence              00000 0112457899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.05  E-value=1.1e-10  Score=95.23  Aligned_cols=98  Identities=16%  Similarity=0.129  Sum_probs=58.1

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc------cccccC----CccC--
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT------LMEFVD----PRLG--   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~~--   67 (214)
                      +|||++.. ..++.++||||||++++|+++|..||.......  .+.... .......      .....+    +...  
T Consensus       178 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (295)
T cd07837         178 RAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ--QLLHIF-KLLGTPTEQVWPGVSKLRDWHEFPQWKPQ  254 (295)
T ss_pred             CChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHH-HHhCCCChhhCcchhhccchhhcCcccch
Confidence            58998764 457899999999999999999999885322110  000000 0000000      000000    0000  


Q ss_pred             --CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 --SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 --~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                        ....+.....+.+++.+||+.+|.+||++.+++.
T Consensus       255 ~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         255 DLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             hHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence              0000123456889999999999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.05  E-value=2.8e-10  Score=92.67  Aligned_cols=92  Identities=17%  Similarity=0.237  Sum_probs=61.5

Q ss_pred             CcccccccCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGY--LTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~--~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      +|||.+.+..  .+.++||||||++++|+++|..||.......  .........         ....  ...+......+
T Consensus       173 ~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~---------~~~~--~~~~~~~~~~l  239 (288)
T cd05583         173 MAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQSEISRRI---------LKSK--PPFPKTMSAEA  239 (288)
T ss_pred             cCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hHHHHHHHH---------HccC--CCCCcccCHHH
Confidence            5789876654  7889999999999999999999985321110  011111111         0000  11122233468


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      .+++.+||+.+|++||++.++...|+.
T Consensus       240 ~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         240 RDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             HHHHHHHhcCCHhhccCcchHHHHhcC
Confidence            899999999999999999988887764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.04  E-value=7.8e-10  Score=96.36  Aligned_cols=102  Identities=13%  Similarity=0.116  Sum_probs=59.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC-CCCCCchhHHHHHHhhcCcc-----ccc-------------
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP-DSNCTCPLDWAFHLHQSGTL-----MEF-------------   61 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~-------------   61 (214)
                      ||||++.+..++.++|||||||++||+++|..++.... ....................     ...             
T Consensus       329 ~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~  408 (461)
T PHA03211        329 NAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRA  408 (461)
T ss_pred             cCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhh
Confidence            68999998899999999999999999998776543211 11111111111111100000     000             


Q ss_pred             ---cCCcc-CCCCCH--HHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           62 ---VDPRL-GSEFNK--VEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        62 ---~~~~~-~~~~~~--~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                         ..+.. ...+..  .....+..|+.+||+.||.+||++.++++.
T Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        409 ARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             hcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence               00000 000110  112367889999999999999999999864

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.04  E-value=4e-10  Score=98.13  Aligned_cols=83  Identities=19%  Similarity=0.292  Sum_probs=62.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      .|||++....|++++|+||+|++|+||++|+.||.......               .++..+..   +.+.........+
T Consensus       480 ~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~---------------ei~~~i~~---~~~s~~vS~~AKd  541 (612)
T KOG0603|consen  480 VAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI---------------EIHTRIQM---PKFSECVSDEAKD  541 (612)
T ss_pred             cChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH---------------HHHHhhcC---CccccccCHHHHH
Confidence            48999999999999999999999999999999996543330               01111111   1112334457889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+|++.+|.+|+++.++..
T Consensus       542 Ll~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  542 LLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             HHHHhccCChhhCcChhhhcc
Confidence            999999999999999999864

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.04  E-value=4.3e-10  Score=104.47  Aligned_cols=85  Identities=22%  Similarity=0.299  Sum_probs=58.6

Q ss_pred             Cccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~--~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||++..  ..++.++|||||||+||||++|+.||.....     .......+ ...       +.+.   ....+..+
T Consensus       208 mAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~-----~~qli~~l-k~~-------p~lp---i~~~S~eL  271 (1021)
T PTZ00266        208 WSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN-----FSQLISEL-KRG-------PDLP---IKGKSKEL  271 (1021)
T ss_pred             cCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc-----HHHHHHHH-hcC-------CCCC---cCCCCHHH
Confidence            68998864  4588999999999999999999999853211     11111111 110       0010   01123478


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..|+..||+.+|.+||++.+++.
T Consensus       272 ~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        272 NILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HHHHHHHhcCChhHCcCHHHHhc
Confidence            89999999999999999999984

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.04  E-value=1e-11  Score=102.86  Aligned_cols=81  Identities=20%  Similarity=0.210  Sum_probs=57.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++|+++|+.||......      ......         .....  ..+......+..
T Consensus       165 ~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~------~~~~~i---------~~~~~--~~p~~~~~~~~~  227 (318)
T cd05582         165 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK------ETMTMI---------LKAKL--GMPQFLSPEAQS  227 (318)
T ss_pred             cCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH------HHHHHH---------HcCCC--CCCCCCCHHHHH
Confidence            6899998888899999999999999999999998532111      111111         11111  112223447889


Q ss_pred             HHHHhhccCCCCCCCHHH
Q 028061           81 IALLCTNASPSLRPTMSE   98 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~   98 (214)
                      ++.+||+.+|++||++.+
T Consensus       228 li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         228 LLRALFKRNPANRLGAGP  245 (318)
T ss_pred             HHHHHhhcCHhHcCCCCC
Confidence            999999999999999655

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.04  E-value=2.4e-10  Score=94.06  Aligned_cols=101  Identities=14%  Similarity=0.115  Sum_probs=59.4

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCch------hHHHHHHhhc------------Cccccc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCP------LDWAFHLHQS------------GTLMEF   61 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~------~~~~~~~~~~------------~~~~~~   61 (214)
                      +|||++.+ ..++.++||||||++++|+++|+.||...........      ..........            ......
T Consensus       182 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  261 (316)
T cd07842         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTL  261 (316)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhh
Confidence            58998765 4578999999999999999999999864433220000      0000000000            000000


Q ss_pred             cCCccCCCCC----H-------HHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           62 VDPRLGSEFN----K-------VEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        62 ~~~~~~~~~~----~-------~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+.......+    .       .....+.+++.+||+.+|++||++.+++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         262 MKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             hhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            0000000011    0       12346889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.04  E-value=1.1e-10  Score=96.26  Aligned_cols=98  Identities=14%  Similarity=0.185  Sum_probs=59.4

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc-----------C-ccccccCCccC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS-----------G-TLMEFVDPRLG   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~   67 (214)
                      +|||++.+ ..++.++||||||++++|+++|+.||......+.   ..........           . .....-.+...
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (309)
T cd07872         171 RPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE---LHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYK  247 (309)
T ss_pred             cCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccC
Confidence            58998764 5689999999999999999999999864322110   0000000000           0 00000000000


Q ss_pred             C----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 S----EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ~----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .    .........+.+++.+|++.||.+||++.+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         248 PQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             CCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            0    000112346789999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.03  E-value=6.5e-11  Score=99.24  Aligned_cols=85  Identities=18%  Similarity=0.119  Sum_probs=59.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||......       ........+.        .  ..+......+.+
T Consensus       195 ~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-------~~~~~i~~~~--------~--~~p~~~~~~~~~  257 (340)
T PTZ00426        195 IAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-------LIYQKILEGI--------I--YFPKFLDNNCKH  257 (340)
T ss_pred             cCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-------HHHHHHhcCC--------C--CCCCCCCHHHHH
Confidence            6999998888999999999999999999999999632211       0111111110        0  112223346789


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~~  102 (214)
                      ++.+|++.+|++|+     ++.++++.
T Consensus       258 li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        258 LMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             HHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence            99999999999995     78887653

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.03  E-value=2.3e-10  Score=93.02  Aligned_cols=88  Identities=17%  Similarity=0.135  Sum_probs=59.7

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||.+.. ..++.++|||||||+++|+++|..||.........   . .....      ...+    ...+......+.
T Consensus       162 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~---~-~~~~~------~~~~----~~~~~~~~~~~~  227 (279)
T cd05633         162 MAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---E-IDRMT------LTVN----VELPDSFSPELK  227 (279)
T ss_pred             cCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH---H-HHHHh------hcCC----cCCccccCHHHH
Confidence            68998864 45789999999999999999999998643222110   0 00000      0011    112233445788


Q ss_pred             HHHHHhhccCCCCCC-----CHHHHHHH
Q 028061           80 KIALLCTNASPSLRP-----TMSEVVSM  102 (214)
Q Consensus        80 ~l~~~C~~~~p~~RP-----s~~~v~~~  102 (214)
                      .++.+||+.+|.+||     +++++++.
T Consensus       228 ~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         228 SLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             HHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            999999999999999     58888763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.03  E-value=1.1e-10  Score=93.17  Aligned_cols=91  Identities=21%  Similarity=0.320  Sum_probs=59.9

Q ss_pred             Ccccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYAL-WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~-~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++. ....+.++||||+|++++++++|..|+.......   .......... .......      .........+.
T Consensus       165 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~---~~~~~~~~~~-~~~~~~~------~~~~~~~~~l~  234 (260)
T PF00069_consen  165 MAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD---QLEIIEKILK-RPLPSSS------QQSREKSEELR  234 (260)
T ss_dssp             SCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH---HHHHHHHHHH-THHHHHT------TSHTTSHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccchh---hhhhhhhccc-ccccccc------cccchhHHHHH
Confidence            5899988 8899999999999999999999999986330000   0000000000 0000000      00000125899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +++.+||+.+|++||++.++++
T Consensus       235 ~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  235 DLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHSSSSGGGSTTHHHHHT
T ss_pred             HHHHHHccCChhHCcCHHHHhc
Confidence            9999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.03  E-value=4.1e-10  Score=94.26  Aligned_cols=99  Identities=14%  Similarity=0.078  Sum_probs=58.0

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHh------hc---CccccccC-CccCCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLH------QS---GTLMEFVD-PRLGSE   69 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~-~~~~~~   69 (214)
                      +|||++.. ..++.++|||||||+++|+++|+.||.........  ........      ..   ..+..... ......
T Consensus       185 ~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (342)
T cd07854         185 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQM--QLILESVPVVREEDRNELLNVIPSFVRNDGGEPR  262 (342)
T ss_pred             cCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHhcCCCChHHhhhhhhhhhhhhhhcccccC
Confidence            58997654 56788999999999999999999998533211000  00000000      00   00000000 000000


Q ss_pred             CC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           70 FN-----KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        70 ~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+     ......+.+++.+||+.+|++||++.+++.
T Consensus       263 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         263 RPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             CCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            00     112346889999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.03  E-value=2.7e-10  Score=92.31  Aligned_cols=85  Identities=14%  Similarity=0.231  Sum_probs=56.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.++.++.++||||||++++|+++|+.||.........   .   .+. ..    ...  .....+......+..
T Consensus       161 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~---~~~-~~----~~~--~~~~~~~~~~~~~~~  227 (277)
T cd05577         161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK---E---ELK-RR----TLE--MAVEYPDKFSPEAKD  227 (277)
T ss_pred             CCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH---H---HHH-hc----ccc--ccccCCccCCHHHHH
Confidence            5899988888999999999999999999999998543221100   0   000 00    000  001122223447889


Q ss_pred             HHHHhhccCCCCCCCHHH
Q 028061           81 IALLCTNASPSLRPTMSE   98 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~   98 (214)
                      ++.+||+.+|.+||++.+
T Consensus       228 li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         228 LCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             HHHHHccCChhHccCCCc
Confidence            999999999999994444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.03  E-value=1.2e-10  Score=97.20  Aligned_cols=102  Identities=19%  Similarity=0.129  Sum_probs=59.4

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHH--------HHHhhcC---ccccccC-CccC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWA--------FHLHQSG---TLMEFVD-PRLG   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~-~~~~   67 (214)
                      ||||++.. ..++.++||||||++++|+++|+.||...............        .......   .+...+. ....
T Consensus       179 ~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (337)
T cd07852         179 RAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRK  258 (337)
T ss_pred             cCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhccccccc
Confidence            58997754 56788999999999999999999998532211100000000        0000000   0000000 0000


Q ss_pred             --CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           68 --SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        68 --~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                        .......+..+.+++.+||+.+|++||++.+++..
T Consensus       259 ~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         259 PLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             chhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence              00011134578999999999999999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.02  E-value=2.6e-10  Score=90.48  Aligned_cols=75  Identities=19%  Similarity=0.207  Sum_probs=54.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||.+..+.++.++||||+|++++|+++|+.++......                 .......    ..+......+..
T Consensus       149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----------------~~~~~~~----~~~~~~~~~~~~  207 (237)
T cd05576         149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----------------INTHTTL----NIPEWVSEEARS  207 (237)
T ss_pred             cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----------------ccccccc----CCcccCCHHHHH
Confidence            6899988888999999999999999999999876422110                 0000000    112223447889


Q ss_pred             HHHHhhccCCCCCCCH
Q 028061           81 IALLCTNASPSLRPTM   96 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~   96 (214)
                      ++.+||+.||++||++
T Consensus       208 li~~~l~~dp~~R~~~  223 (237)
T cd05576         208 LLQQLLQFNPTERLGA  223 (237)
T ss_pred             HHHHHccCCHHHhcCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.01  E-value=6.1e-11  Score=98.47  Aligned_cols=80  Identities=13%  Similarity=0.060  Sum_probs=56.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.....      .......         +....  ..+......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~------~~~~~~i---------~~~~~--~~~~~~~~~~~~  225 (323)
T cd05575         163 LAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT------AEMYDNI---------LNKPL--RLKPNISVSARH  225 (323)
T ss_pred             cChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH------HHHHHHH---------HcCCC--CCCCCCCHHHHH
Confidence            689999988999999999999999999999999853211      1111111         11100  011112447889


Q ss_pred             HHHHhhccCCCCCCCHH
Q 028061           81 IALLCTNASPSLRPTMS   97 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~   97 (214)
                      ++.+||+.+|.+||++.
T Consensus       226 li~~~l~~~p~~R~~~~  242 (323)
T cd05575         226 LLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HHHHHhhcCHHhCCCCC
Confidence            99999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.01  E-value=1.1e-10  Score=97.32  Aligned_cols=98  Identities=14%  Similarity=0.154  Sum_probs=59.7

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh-----------cCccccccCC-ccC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ-----------SGTLMEFVDP-RLG   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~-~~~   67 (214)
                      +|||++.. ..++.++||||||++++|+++|+.||........   .........           ...+....+. ...
T Consensus       178 ~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  254 (334)
T cd07855         178 RAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ---LKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRK  254 (334)
T ss_pred             cChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH---HHHHHHHhCCChhHhhhhhchhhHHHHHhhcccC
Confidence            47998765 4688999999999999999999999854322110   000000000           0000000000 000


Q ss_pred             CCCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 SEFN-----KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ...+     ......+..++.+||+.+|++||++.+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         255 QPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             CCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            0111     123457899999999999999999999886

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.01  E-value=2.3e-10  Score=94.23  Aligned_cols=98  Identities=17%  Similarity=0.186  Sum_probs=58.6

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc--Cccc---------ccc--CCcc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS--GTLM---------EFV--DPRL   66 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~---------~~~--~~~~   66 (214)
                      +|||++.+ ..++.++||||+|++++|+++|+.||.......   ...........  ....         ...  ....
T Consensus       175 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (309)
T cd07845         175 RAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE---QLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQP  251 (309)
T ss_pred             cChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCChhhchhhhcccccccccccCCC
Confidence            58998765 467899999999999999999999986432211   00000000000  0000         000  0000


Q ss_pred             CCCCC---HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           67 GSEFN---KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        67 ~~~~~---~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .....   ......+.+++.+|++.||++||++.+++.
T Consensus       252 ~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         252 YNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             CCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            00000   012346788999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.01  E-value=3.4e-10  Score=104.54  Aligned_cols=92  Identities=18%  Similarity=0.163  Sum_probs=62.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||........   .       ...   ....+... ......+..+.+
T Consensus       198 mAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki---~-------~~~---~i~~P~~~-~p~~~iP~~L~~  263 (932)
T PRK13184        198 MAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI---S-------YRD---VILSPIEV-APYREIPPFLSQ  263 (932)
T ss_pred             CCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh---h-------hhh---hccChhhc-cccccCCHHHHH
Confidence            699999989999999999999999999999999864221110   0       000   00111000 001123346889


Q ss_pred             HHHHhhccCCCCCC-CHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRP-TMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RP-s~~~v~~~L~~~  106 (214)
                      ++.+||+.+|++|+ ++.+++..|+..
T Consensus       264 LI~rcL~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        264 IAMKALAVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            99999999999996 567777766654

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.01  E-value=2.5e-11  Score=100.88  Aligned_cols=84  Identities=18%  Similarity=0.186  Sum_probs=59.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.++.++.++|||||||+++|+++|+.||......      ... ......      ...    .+......+..
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~------~~~-~~i~~~------~~~----~p~~~~~~~~~  225 (325)
T cd05594         163 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLF-ELILME------EIR----FPRTLSPEAKS  225 (325)
T ss_pred             CCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH------HHH-HHHhcC------CCC----CCCCCCHHHHH
Confidence            6999999889999999999999999999999998532211      000 110000      001    11223346889


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      ++.+||+.||++|+     ++.++++
T Consensus       226 li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         226 LLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             HHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            99999999999996     8888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.00  E-value=4.3e-10  Score=91.61  Aligned_cols=99  Identities=18%  Similarity=0.157  Sum_probs=57.5

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---c------ccccc-------C
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---T------LMEFV-------D   63 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~-------~   63 (214)
                      +|||++.+ ..++.++||||||++++|+++|+.||......  .......+......   .      .....       .
T Consensus       170 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (291)
T cd07844         170 RPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV--EDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYP  247 (291)
T ss_pred             CCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH--HHHHHHHHHhcCCCChhhhhhhhhccccccccccccC
Confidence            58998765 45889999999999999999999998533210  00000000000000   0      00000       0


Q ss_pred             -CccCCCCC-HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           64 -PRLGSEFN-KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        64 -~~~~~~~~-~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                       ..+....+ ......+.+++.+|++.+|++||++.+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         248 PRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             ChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence             00000000 001146788999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.00  E-value=1.2e-10  Score=96.80  Aligned_cols=79  Identities=16%  Similarity=0.270  Sum_probs=56.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++|+++|+.||......      .....         +.....  ..+......+..
T Consensus       168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~------~~~~~---------i~~~~~--~~p~~~~~~~~~  230 (323)
T cd05615         168 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED------ELFQS---------IMEHNV--SYPKSLSKEAVS  230 (323)
T ss_pred             cCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHH---------HHhCCC--CCCccCCHHHHH
Confidence            6899998888999999999999999999999998642211      00001         111110  112223447889


Q ss_pred             HHHHhhccCCCCCCCH
Q 028061           81 IALLCTNASPSLRPTM   96 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~   96 (214)
                      ++.+||+.+|.+|++.
T Consensus       231 li~~~l~~~p~~R~~~  246 (323)
T cd05615         231 ICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHHHHcccCHhhCCCC
Confidence            9999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.00  E-value=7.3e-10  Score=90.54  Aligned_cols=99  Identities=15%  Similarity=0.135  Sum_probs=59.2

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh---------cCccccccCCccCCCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ---------SGTLMEFVDPRLGSEF   70 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~   70 (214)
                      +|||.+.. ..++.++|||||||+++|+++|..+|.......   ..........         ...+............
T Consensus       169 ~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (298)
T cd07841         169 RAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID---QLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPT  245 (298)
T ss_pred             eCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH---HHHHHHHHcCCCchhhhhhcccccccccccccCCc
Confidence            47898754 467899999999999999999977765322111   0100000000         0000001100000111


Q ss_pred             -----CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           71 -----NKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        71 -----~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                           .......+.+++.+||+.+|++||++.+|+..
T Consensus       246 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         246 PLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             chhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence                 12234578899999999999999999999873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.00  E-value=4.7e-11  Score=99.19  Aligned_cols=86  Identities=12%  Similarity=0.076  Sum_probs=59.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||......      ......         .....  ..+......+..
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i---------~~~~~--~~~~~~~~~~~~  225 (325)
T cd05602         163 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA------EMYDNI---------LNKPL--QLKPNITNSARH  225 (325)
T ss_pred             cCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH------HHHHHH---------HhCCc--CCCCCCCHHHHH
Confidence            6899999889999999999999999999999998632211      111011         00000  111123347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSML  103 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L  103 (214)
                      ++.+||+.+|.+||++.+.+..+
T Consensus       226 li~~~l~~~p~~R~~~~~~~~~i  248 (325)
T cd05602         226 LLEGLLQKDRTKRLGAKDDFMEI  248 (325)
T ss_pred             HHHHHcccCHHHCCCCCCCHHHH
Confidence            99999999999999987544433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.00  E-value=2.9e-10  Score=95.08  Aligned_cols=98  Identities=16%  Similarity=0.191  Sum_probs=58.2

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc-----------CccccccC--Ccc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS-----------GTLMEFVD--PRL   66 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~--~~~   66 (214)
                      +|||++.+ ..++.++|||||||+++||++|+.||.......   ...........           ......+.  +..
T Consensus       182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (343)
T cd07878         182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID---QLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHM  258 (343)
T ss_pred             cCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH---HHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccc
Confidence            68998876 578999999999999999999999985322110   00000000000           00000000  000


Q ss_pred             CCC----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           67 GSE----FNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        67 ~~~----~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ...    ........+.+|+.+|++.||.+||++.+++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         259 PQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             cchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            000    00001224678999999999999999999985

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.00  E-value=1.4e-10  Score=96.15  Aligned_cols=80  Identities=13%  Similarity=0.048  Sum_probs=56.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++|||||||+++||++|+.||.....      ......         ++....  ..+......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~---------i~~~~~--~~~~~~~~~~~~  225 (321)
T cd05603         163 LAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV------SQMYDN---------ILHKPL--QLPGGKTVAACD  225 (321)
T ss_pred             CCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH------HHHHHH---------HhcCCC--CCCCCCCHHHHH
Confidence            689999888899999999999999999999999853211      111111         111111  112223347889


Q ss_pred             HHHHhhccCCCCCCCHH
Q 028061           81 IALLCTNASPSLRPTMS   97 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~   97 (214)
                      ++.+||+.+|.+||+..
T Consensus       226 li~~~l~~~p~~R~~~~  242 (321)
T cd05603         226 LLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHHHHccCCHhhcCCCC
Confidence            99999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.00  E-value=2.3e-10  Score=99.39  Aligned_cols=85  Identities=26%  Similarity=0.313  Sum_probs=59.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++. ..|++..||||||++++||+|+..||+.-     .+.. .+++....|.-...+.+        -...++.+
T Consensus       211 MAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC-----~n~A-QIYKKV~SGiKP~sl~k--------V~dPevr~  275 (632)
T KOG0584|consen  211 MAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSEC-----TNPA-QIYKKVTSGIKPAALSK--------VKDPEVRE  275 (632)
T ss_pred             cChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhh-----CCHH-HHHHHHHcCCCHHHhhc--------cCCHHHHH
Confidence            8999875 89999999999999999999999999631     1111 11222112211111110        01226899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+|+.. ...||++.+++.
T Consensus       276 fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  276 FIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             HHHHHhcC-chhccCHHHHhh
Confidence            99999998 999999999985

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.00  E-value=3.4e-10  Score=90.07  Aligned_cols=85  Identities=20%  Similarity=0.259  Sum_probs=60.4

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccC---CccCCCCCHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVD---PRLGSEFNKVE   74 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   74 (214)
                      ||||.+-   ..+|..++|||||||.|+|++||+.||..-..+-    . .         +-++++   |.+...  ...
T Consensus       258 MaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF----e-~---------ltkvln~ePP~L~~~--~gF  321 (391)
T KOG0983|consen  258 MAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF----E-V---------LTKVLNEEPPLLPGH--MGF  321 (391)
T ss_pred             cCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH----H-H---------HHHHHhcCCCCCCcc--cCc
Confidence            8999886   3589999999999999999999999996422210    0 0         111111   222111  113


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           75 AERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ...+..++..|+..|+.+||...++++
T Consensus       322 Sp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  322 SPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             CHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            457899999999999999999998875

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.99  E-value=7.8e-10  Score=90.15  Aligned_cols=99  Identities=13%  Similarity=0.116  Sum_probs=58.0

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh------------cCc-cccccCCcc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ------------SGT-LMEFVDPRL   66 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~------------~~~-~~~~~~~~~   66 (214)
                      +|||++.+ ..++.++||||||++++|+++|+.||....... ..+.. .+....            ... .........
T Consensus       170 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (291)
T cd07870         170 RPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF-EQLEK-IWTVLGVPTEDTWPGVSKLPNYKPEWFLPCK  247 (291)
T ss_pred             cCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH-HHHHH-HHHHcCCCChhhhhhhhhcccccchhccccC
Confidence            58998875 357889999999999999999999986432210 00000 000000            000 000000000


Q ss_pred             CCCC-----CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           67 GSEF-----NKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        67 ~~~~-----~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ....     .......+.+++.+|++.+|.+||++.+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         248 PQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             CcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            0000     0001346788999999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.99  E-value=4.1e-10  Score=91.46  Aligned_cols=87  Identities=16%  Similarity=0.140  Sum_probs=59.7

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+ .++.++||||||++++|+++|+.||.........   .. ...      ....+.    ..+......+.
T Consensus       162 ~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~---~~-~~~------~~~~~~----~~~~~~s~~~~  227 (278)
T cd05606         162 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---EI-DRM------TLTMAV----ELPDSFSPELR  227 (278)
T ss_pred             cCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH---HH-HHH------hhccCC----CCCCcCCHHHH
Confidence            689998754 6899999999999999999999998643221110   00 000      000111    12222345789


Q ss_pred             HHHHHhhccCCCCCC-----CHHHHHH
Q 028061           80 KIALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      .++.+|+..+|.+||     ++.++++
T Consensus       228 ~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         228 SLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            999999999999999     8888874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.99  E-value=2.9e-10  Score=92.85  Aligned_cols=98  Identities=18%  Similarity=0.184  Sum_probs=58.4

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---------ccccc--cCCccCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---------TLMEF--VDPRLGS   68 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~~   68 (214)
                      +|||++.+ ..++.++||||||++++|+++|+.||......+   ............         .+...  ..+....
T Consensus       170 ~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (294)
T PLN00009        170 RAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID---ELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPP  246 (294)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChhhccccccchhhhhhcccCCC
Confidence            58998865 457899999999999999999999986432110   000000000000         00000  0000000


Q ss_pred             C----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 E----FNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ~----~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .    ........+.+++.+|++.+|++||++.+++.
T Consensus       247 ~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        247 KDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             CCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0    01112346889999999999999999999985

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.99  E-value=2.5e-10  Score=92.07  Aligned_cols=84  Identities=12%  Similarity=0.091  Sum_probs=59.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+.....+.++||||||++++|+++|+.||.......      ..         ..+.+.  ....+...+..+..
T Consensus       189 ~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~---------~~~~~~--~~~~~~~~~~~~~~  251 (280)
T cd05581         189 VSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL------TF---------QKILKL--EYSFPPNFPPDAKD  251 (280)
T ss_pred             cCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH------HH---------HHHHhc--CCCCCCccCHHHHH
Confidence            57898888889999999999999999999999986432100      00         000000  01122223457899


Q ss_pred             HHHHhhccCCCCCCCH----HHHHH
Q 028061           81 IALLCTNASPSLRPTM----SEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~----~~v~~  101 (214)
                      ++.+||+.+|.+||++    .+++.
T Consensus       252 li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         252 LIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HHHHHhcCCHhhCCCcccCHHHHhc
Confidence            9999999999999999    77654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.98  E-value=7.4e-10  Score=89.75  Aligned_cols=98  Identities=16%  Similarity=0.134  Sum_probs=58.1

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC------------ccccccCCccC
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG------------TLMEFVDPRLG   67 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~   67 (214)
                      +|||++... .++.++||||+|++++|+++|..+|......   .............            ....+..+...
T Consensus       167 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (286)
T cd07832         167 RAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI---EQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESK  243 (286)
T ss_pred             cCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH---HHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCC
Confidence            589987654 4689999999999999999997776432211   0001110000000            00000000000


Q ss_pred             ----CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 ----SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ----~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                          ..........+.+++.+||+.+|.+||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         244 PIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             cchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence                0000122367899999999999999999999975

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.98  E-value=3.2e-10  Score=90.06  Aligned_cols=81  Identities=17%  Similarity=0.145  Sum_probs=56.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ++||.+.....+.++|+|+||++++|+++|+.||.....      ......         +....  ...+...+..+.+
T Consensus       160 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~------~~~~~~---------~~~~~--~~~~~~~~~~l~~  222 (250)
T cd05123         160 LAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR------KEIYEK---------ILKDP--LRFPEFLSPEARD  222 (250)
T ss_pred             cChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHH---------HhcCC--CCCCCCCCHHHHH
Confidence            579988888889999999999999999999999853221      000001         11111  1122223457899


Q ss_pred             HHHHhhccCCCCCCCHHH
Q 028061           81 IALLCTNASPSLRPTMSE   98 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~   98 (214)
                      ++.+||..+|++||++..
T Consensus       223 ~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         223 LISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHHhcCCHhhCCCccc
Confidence            999999999999999943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.97  E-value=5e-11  Score=99.03  Aligned_cols=84  Identities=14%  Similarity=0.050  Sum_probs=58.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||......      ......         +....  ..+......+..
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~------~~~~~~---------~~~~~--~~~~~~~~~~~~  225 (325)
T cd05604         163 LAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA------EMYDNI---------LHKPL--VLRPGASLTAWS  225 (325)
T ss_pred             CCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH------HHHHHH---------HcCCc--cCCCCCCHHHHH
Confidence            6899999999999999999999999999999998532211      111111         11110  011112346788


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+|++.+|.+||++.+.+.
T Consensus       226 ll~~ll~~~p~~R~~~~~~~~  246 (325)
T cd05604         226 ILEELLEKDRQRRLGAKEDFL  246 (325)
T ss_pred             HHHHHhccCHHhcCCCCCCHH
Confidence            999999999999998764333

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.97  E-value=1.1e-09  Score=91.33  Aligned_cols=101  Identities=19%  Similarity=0.135  Sum_probs=59.8

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCc-h--------hHHHHHHhhcCccccccCC-ccCCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC-P--------LDWAFHLHQSGTLMEFVDP-RLGSE   69 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~-~~~~~   69 (214)
                      +|||++.. ..++.++||||||++++|+++|+.||.......... +        .++..... .+...+++.. .....
T Consensus       172 ~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  250 (328)
T cd07856         172 RAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTIC-SENTLRFVQSLPKREP  250 (328)
T ss_pred             cCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc-chhhHHHHhhccccCC
Confidence            58998765 568999999999999999999999985432100000 0        00000000 0000000000 00001


Q ss_pred             CCH-----HHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           70 FNK-----VEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        70 ~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      .+.     .....+.+++.+||+.+|++||++.+++..
T Consensus       251 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         251 VPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             CcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            111     123578999999999999999999998753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.97  E-value=7.2e-10  Score=89.82  Aligned_cols=98  Identities=15%  Similarity=0.220  Sum_probs=58.6

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC--------ccccccCCccC----
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG--------TLMEFVDPRLG----   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~----   67 (214)
                      ++||++.. ..++.++|||+||++++|+++|+.||......+   ............        ...........    
T Consensus       167 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (284)
T cd07836         167 RAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED---QLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPP  243 (284)
T ss_pred             cChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHHhCCCChhhHHHHhcCchhcccccCCCh
Confidence            57998765 357889999999999999999999986432211   000000000000        00000000000    


Q ss_pred             ---CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 ---SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ---~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                         ..........+.+++.+||+.+|.+||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         244 QDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence               0001122446789999999999999999999874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.97  E-value=5e-10  Score=93.26  Aligned_cols=98  Identities=18%  Similarity=0.234  Sum_probs=59.3

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc---ccc--------ccCCccCC
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT---LME--------FVDPRLGS   68 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------~~~~~~~~   68 (214)
                      +|||++.+. .++.++||||||++++|+++|+.||.......   ....+........   ...        ........
T Consensus       200 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (335)
T PTZ00024        200 RAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID---QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPK  276 (335)
T ss_pred             CCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCchhhCcchhhcccccccCcCCcc
Confidence            589988754 47899999999999999999999986432211   1111111100000   000        00000000


Q ss_pred             ---CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 ---EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                         .........+.+++.+||+.+|++||++.+++.
T Consensus       277 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        277 DLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             cHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence               001112346889999999999999999999986

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.97  E-value=3.3e-10  Score=96.07  Aligned_cols=86  Identities=19%  Similarity=0.197  Sum_probs=65.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      |.||.+.+..|+.|+|+||+||+++|+++-+++|......      ..+         .++... ...+.+.....++..
T Consensus       173 mcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~------~Li---------~ki~~~-~~~Plp~~ys~el~~  236 (426)
T KOG0589|consen  173 MCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS------ELI---------LKINRG-LYSPLPSMYSSELRS  236 (426)
T ss_pred             cCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH------HHH---------HHHhhc-cCCCCCccccHHHHH
Confidence            6799999999999999999999999999999998642211      111         111111 123344555668999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++..|+..+|+.||++.+++.+
T Consensus       237 lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  237 LVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHHhhcCCccCCCHHHHhhC
Confidence            9999999999999999999865

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.94  E-value=1.9e-09  Score=91.25  Aligned_cols=100  Identities=17%  Similarity=0.184  Sum_probs=62.4

Q ss_pred             cccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC------ccccccC--------Ccc
Q 028061            2 APEYAL-WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG------TLMEFVD--------PRL   66 (214)
Q Consensus         2 APE~~~-~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--------~~~   66 (214)
                      |||++. .+.|+.+.|+|+||||+.||.+-++-|....+.+..+.+-.+.......      .+...+.        -.+
T Consensus       177 APEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l  256 (538)
T KOG0661|consen  177 APEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPL  256 (538)
T ss_pred             chHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCCh
Confidence            899765 7899999999999999999999888775433222111110000000000      0000111        111


Q ss_pred             CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           67 GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        67 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ..- -+.+..+...++.+|+++||.+||++.+.++.
T Consensus       257 ~~L-~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  257 KDL-LPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HHh-CcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            111 12256689999999999999999999999864

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.94  E-value=5.3e-10  Score=96.90  Aligned_cols=84  Identities=17%  Similarity=0.241  Sum_probs=62.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.....+..+||||.||++|-|+.|++||....-.+          .     +..+.....  ..|........+
T Consensus       185 IAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke----------t-----y~~Ik~~~Y--~~P~~ls~~A~d  247 (592)
T KOG0575|consen  185 IAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE----------T-----YNKIKLNEY--SMPSHLSAEAKD  247 (592)
T ss_pred             cChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH----------H-----HHHHHhcCc--ccccccCHHHHH
Confidence            59999998889999999999999999999999996421110          0     111111111  112334457889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+.++.+|.+||++.+|+.
T Consensus       248 LI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  248 LIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             HHHHHhcCCcccCCCHHHHhc
Confidence            999999999999999999985

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.93  E-value=4.5e-10  Score=94.07  Aligned_cols=98  Identities=19%  Similarity=0.214  Sum_probs=58.6

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHh-----------hcCccccc---cCCc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLH-----------QSGTLMEF---VDPR   65 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~---~~~~   65 (214)
                      +|||.+.. ..++.++|||||||+++|+++|+.||.......   .........           ........   +...
T Consensus       182 ~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (343)
T cd07851         182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID---QLKRIMNLVGTPDEELLQKISSESARNYIQSLPQM  258 (343)
T ss_pred             cCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHhcCCCCHHHHhhccchhHHHHHHhcccc
Confidence            57998764 367899999999999999999999985322110   000000000           00000000   0000


Q ss_pred             cCCCC---CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           66 LGSEF---NKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        66 ~~~~~---~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ....+   .......+.+++.+||+.+|++||++.+|+.
T Consensus       259 ~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         259 PKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             CCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            00000   0112457889999999999999999999975

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.93  E-value=2.4e-10  Score=95.06  Aligned_cols=87  Identities=15%  Similarity=0.187  Sum_probs=57.2

Q ss_pred             Ccccccc------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHH
Q 028061            1 MAPEYAL------WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVE   74 (214)
Q Consensus         1 mAPE~~~------~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (214)
                      ||||++.      ...++.++|||||||+++||++|+.||......      ...........   .+.  .  +.....
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~------~~~~~i~~~~~---~~~--~--~~~~~~  236 (330)
T cd05601         170 IAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA------KTYNNIMNFQR---FLK--F--PEDPKV  236 (330)
T ss_pred             cCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH------HHHHHHHcCCC---ccC--C--CCCCCC
Confidence            6899886      456789999999999999999999998532211      11111110000   000  0  001113


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           75 AERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ...+..++.+|+. +|.+||++.+++.
T Consensus       237 ~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         237 SSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             CHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            3468889999998 9999999999874

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.93  E-value=8.2e-11  Score=97.93  Aligned_cols=85  Identities=21%  Similarity=0.217  Sum_probs=55.8

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+. .++.++|||||||+++||++|+.||......      . .......+.      ..+..   ......+.
T Consensus       163 ~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~------~-~~~~i~~~~------~~~~~---~~~~~~~~  226 (330)
T cd05586         163 LAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ------Q-MYRNIAFGK------VRFPK---NVLSDEGR  226 (330)
T ss_pred             cCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH------H-HHHHHHcCC------CCCCC---ccCCHHHH
Confidence            689988754 4799999999999999999999998532111      1 111111111      01110   11234678


Q ss_pred             HHHHHhhccCCCCCCC----HHHHHH
Q 028061           80 KIALLCTNASPSLRPT----MSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs----~~~v~~  101 (214)
                      +++.+||+.+|.+||+    +.+++.
T Consensus       227 ~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         227 QFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             HHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            8999999999999985    555543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=98.91  E-value=1.1e-09  Score=93.07  Aligned_cols=89  Identities=16%  Similarity=0.162  Sum_probs=56.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||.......      .........       ....-+........+.+
T Consensus       215 ~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~------~~~~i~~~~-------~~~~~~~~~~~s~~~~d  281 (381)
T cd05626         215 IAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTE------TQLKVINWE-------NTLHIPPQVKLSPEAVD  281 (381)
T ss_pred             cCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHH------HHHHHHccc-------cccCCCCCCCCCHHHHH
Confidence            68999988889999999999999999999999996422111      000100000       00000001112235666


Q ss_pred             HHHH--hhccCCCCCCCHHHHHHH
Q 028061           81 IALL--CTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~--C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+  |+..++..|+++.+|+..
T Consensus       282 li~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         282 LITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             HHHHHccCcccccCCCCHHHHhcC
Confidence            6665  667777789999999863

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.91  E-value=4.4e-10  Score=93.59  Aligned_cols=99  Identities=15%  Similarity=0.101  Sum_probs=57.9

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCc---------hhHHHHHHhhcCccccc---c---C-
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC---------PLDWAFHLHQSGTLMEF---V---D-   63 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~---~---~-   63 (214)
                      +|||++.+ ..++.++||||||++++|+++|+.||..........         ..+..... ........   .   . 
T Consensus       176 ~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  254 (332)
T cd07857         176 RAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI-GSPKAQNYIRSLPNIPK  254 (332)
T ss_pred             cCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh-hhhhHHHHHHhccccCC
Confidence            58998765 468899999999999999999999885422110000         00000000 00000000   0   0 


Q ss_pred             CccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           64 PRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        64 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+. .........+.+++.+||+.+|++||++.+++.
T Consensus       255 ~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         255 KPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             cchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            0000 000112347889999999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.90  E-value=3.4e-10  Score=95.90  Aligned_cols=87  Identities=17%  Similarity=0.173  Sum_probs=58.2

Q ss_pred             Cccccccc----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCC--HHH
Q 028061            1 MAPEYALW----GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFN--KVE   74 (214)
Q Consensus         1 mAPE~~~~----~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~   74 (214)
                      ||||++..    ..++.++|||||||+++||++|+.||......      ...         ..+.+......++  ...
T Consensus       210 ~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~---------~~i~~~~~~~~~~~~~~~  274 (370)
T cd05596         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTY---------SKIMDHKNSLTFPDDIEI  274 (370)
T ss_pred             ECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH------HHH---------HHHHcCCCcCCCCCcCCC
Confidence            68998864    34789999999999999999999999632211      101         1111110000111  123


Q ss_pred             HHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q 028061           75 AERMIKIALLCTNASPSL--RPTMSEVVSM  102 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~~--RPs~~~v~~~  102 (214)
                      +..+..++.+|+..+|.+  |+++.+++..
T Consensus       275 s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         275 SKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             CHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence            457889999999988987  9999999754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.90  E-value=7.5e-10  Score=90.34  Aligned_cols=83  Identities=12%  Similarity=0.143  Sum_probs=57.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+.....+.++||||||++++|+++|+.||......       .....        +....  ...+......+.+
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~--------~~~~~--~~~~~~~~~~l~~  227 (290)
T cd05580         165 LAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI-------QIYEK--------ILEGK--VRFPSFFSPDAKD  227 (290)
T ss_pred             cChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHH--------HhcCC--ccCCccCCHHHHH
Confidence            5899988888899999999999999999999998532210       00010        01100  0112222457889


Q ss_pred             HHHHhhccCCCCCC-----CHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVV  100 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~  100 (214)
                      ++.+||..+|.+|+     ++.+++
T Consensus       228 li~~~l~~~p~~R~~~~~~~~~~l~  252 (290)
T cd05580         228 LIRNLLQVDLTKRLGNLKNGVNDIK  252 (290)
T ss_pred             HHHHHccCCHHHccCcccCCHHHHH
Confidence            99999999999998     666665

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.89  E-value=2.8e-09  Score=89.66  Aligned_cols=104  Identities=24%  Similarity=0.234  Sum_probs=69.5

Q ss_pred             CcccccccC------CCCchhhHHHHHHHHHHHHcC----------CCCCCCCCCCCCCchhHHHHHHhhcCccccccCC
Q 028061            1 MAPEYALWG------YLTYKADVYSFGVVALEIVSG----------KNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDP   64 (214)
Q Consensus         1 mAPE~~~~~------~~t~ksDVySfGivl~Ei~tg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (214)
                      ||||++...      .--..+||||||.|+||+.-+          +.||...-+.+...      .-+..-...+.++|
T Consensus       387 MAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~------eeMrkVVCv~~~RP  460 (513)
T KOG2052|consen  387 MAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSF------EEMRKVVCVQKLRP  460 (513)
T ss_pred             cChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCH------HHHhcceeecccCC
Confidence            899998642      122479999999999999753          24554333322111      11112223444555


Q ss_pred             ccCCCCC-HHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcCCCCC
Q 028061           65 RLGSEFN-KVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIP  110 (214)
Q Consensus        65 ~~~~~~~-~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~~  110 (214)
                      .+.+.+. .++...+.++|..||..+|..|-++-.|.+.|.+..+.+
T Consensus       461 ~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~  507 (513)
T KOG2052|consen  461 NIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSD  507 (513)
T ss_pred             CCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcCh
Confidence            5544443 346678999999999999999999999999999877643

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.89  E-value=3e-09  Score=93.70  Aligned_cols=102  Identities=16%  Similarity=0.140  Sum_probs=57.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCC-CCCCCCCCCCchhHHHHHHhh-cC-------ccccccCCc----cC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNN-MSYVPDSNCTCPLDWAFHLHQ-SG-------TLMEFVDPR----LG   67 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p-~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~----~~   67 (214)
                      +|||++.+..++.++|||||||+++||++|+.+ +..........+......... ..       .+.+.++..    ..
T Consensus       335 ~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~  414 (501)
T PHA03210        335 NSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAG  414 (501)
T ss_pred             CCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCc
Confidence            689999988999999999999999999997753 332111110111110000000 00       000000000    00


Q ss_pred             CCCCH-----HHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           68 SEFNK-----VEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        68 ~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ...+.     .....+..++.+|++.||.+||++.+++..
T Consensus       415 ~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        415 HSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             cchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            00000     012356778899999999999999999863

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.88  E-value=1.3e-09  Score=92.20  Aligned_cols=84  Identities=18%  Similarity=0.153  Sum_probs=60.3

Q ss_pred             CcccccccCC-CC-chhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHH-HHH
Q 028061            1 MAPEYALWGY-LT-YKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVE-AER   77 (214)
Q Consensus         1 mAPE~~~~~~-~t-~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   77 (214)
                      +|||++.+.. |. .++||||+||+|+-|++|+.||.....      ......         +....+  .+|... ...
T Consensus       188 ~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~------~~l~~k---------i~~~~~--~~p~~~~S~~  250 (370)
T KOG0583|consen  188 AAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV------PNLYRK---------IRKGEF--KIPSYLLSPE  250 (370)
T ss_pred             CCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH------HHHHHH---------HhcCCc--cCCCCcCCHH
Confidence            6999999765 65 789999999999999999999974211      111111         111111  112222 557


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +..|+.+|+..+|..|+++.+|+.
T Consensus       251 ~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  251 ARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             HHHHHHHHcCCCcccCCCHHHHhh
Confidence            899999999999999999999983

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.87  E-value=4.7e-10  Score=94.56  Aligned_cols=87  Identities=16%  Similarity=0.080  Sum_probs=56.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|..||......      ........ .      ...+..+........+.+
T Consensus       206 ~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~------~~~~~i~~-~------~~~~~~~~~~~~s~~~~~  272 (364)
T cd05599         206 IAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQ------ETYRKIIN-W------KETLQFPDEVPLSPEAKD  272 (364)
T ss_pred             cCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHH------HHHHHHHc-C------CCccCCCCCCCCCHHHHH
Confidence            6899998889999999999999999999999999632211      11111100 0      000000000112346788


Q ss_pred             HHHHhhccCCCCCCC---HHHHHH
Q 028061           81 IALLCTNASPSLRPT---MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs---~~~v~~  101 (214)
                      ++.+|+. +|.+|++   +.+++.
T Consensus       273 li~~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         273 LIKRLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             HHHHHcc-CHhhcCCCCCHHHHhc
Confidence            8888886 8999998   777764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=98.86  E-value=2.8e-09  Score=92.15  Aligned_cols=84  Identities=15%  Similarity=0.185  Sum_probs=64.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.++.|+..+|.||+||++||+..|++||...          -+..+     +..++...  ..+|......+.+
T Consensus       167 mAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~----------si~~L-----v~~I~~d~--v~~p~~~S~~f~n  229 (808)
T KOG0597|consen  167 MAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR----------SITQL-----VKSILKDP--VKPPSTASSSFVN  229 (808)
T ss_pred             cCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH----------HHHHH-----HHHHhcCC--CCCcccccHHHHH
Confidence            8999999999999999999999999999999999531          11111     11122111  1344466678999


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++..-+..||..|-++.+++.
T Consensus       230 fl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  230 FLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             HHHHHhhcChhhcccHHHHhc
Confidence            999999999999999999874

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.86  E-value=1.4e-09  Score=91.13  Aligned_cols=100  Identities=13%  Similarity=0.066  Sum_probs=58.8

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHH----------hhcCc---cccccCCcc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHL----------HQSGT---LMEFVDPRL   66 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~----------~~~~~---~~~~~~~~~   66 (214)
                      +|||++.. ..++.++|||||||+++|+++|+.||.......  .+.......          .....   ....+....
T Consensus       184 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (345)
T cd07877         184 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID--QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP  261 (345)
T ss_pred             cCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccC
Confidence            58998765 568899999999999999999999985322111  000000000          00000   000000000


Q ss_pred             CCCC---CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           67 GSEF---NKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        67 ~~~~---~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ...+   .......+.+++.+|++.+|.+||++.+++..
T Consensus       262 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         262 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             CcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            0000   00123468899999999999999999998853

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.85  E-value=1.5e-09  Score=94.37  Aligned_cols=86  Identities=27%  Similarity=0.412  Sum_probs=62.1

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      ||||++.   .|.|+-|+||||+||...|+..+++|+...      +-+.-.+...++.      .|.+   ...+....
T Consensus       189 MAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM------NAMSALYHIAQNe------sPtL---qs~eWS~~  253 (948)
T KOG0577|consen  189 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAMSALYHIAQNE------SPTL---QSNEWSDY  253 (948)
T ss_pred             cchhHheeccccccCCccceeeccchhhhhhhcCCCccCc------hHHHHHHHHHhcC------CCCC---CCchhHHH
Confidence            8999986   689999999999999999999999997421      1122222221111      1111   13345668


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +.+++..|++.-|.+||+..++++
T Consensus       254 F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  254 FRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             HHHHHHHHHhhCcccCCcHHHHhh
Confidence            999999999999999999888753

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.85  E-value=2.9e-09  Score=88.77  Aligned_cols=86  Identities=19%  Similarity=0.149  Sum_probs=64.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++++...+.+.|.|.|||++|||+.|..||......               ..+..++-..+.=+..+.....+.+
T Consensus       302 lAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~---------------~Tl~NIv~~~l~Fp~~~~vs~~akD  366 (459)
T KOG0610|consen  302 LAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNK---------------ETLRNIVGQPLKFPEEPEVSSAAKD  366 (459)
T ss_pred             ccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCch---------------hhHHHHhcCCCcCCCCCcchhHHHH
Confidence            6999999999999999999999999999999999643322               2234444333321111244567899


Q ss_pred             HHHHhhccCCCCCCC----HHHHHH
Q 028061           81 IALLCTNASPSLRPT----MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs----~~~v~~  101 (214)
                      |+.+-+.+||.+|-.    +.+|.+
T Consensus       367 LIr~LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  367 LIRKLLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             HHHHHhccChhhhhccccchHHhhc
Confidence            999999999999988    666654

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.85  E-value=1.5e-09  Score=95.11  Aligned_cols=90  Identities=23%  Similarity=0.251  Sum_probs=64.1

Q ss_pred             cccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            2 APEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         2 APE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      |||++++..| ..++||||+||||+.+++|+.||+.   +.   +-... ...+.|.+          ..|...+.++..
T Consensus       179 ~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD---dN---ir~LL-lKV~~G~f----------~MPs~Is~eaQd  241 (786)
T KOG0588|consen  179 APEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD---DN---IRVLL-LKVQRGVF----------EMPSNISSEAQD  241 (786)
T ss_pred             CchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC---cc---HHHHH-HHHHcCcc----------cCCCcCCHHHHH
Confidence            7999998877 5689999999999999999999962   11   11111 11111211          123344557889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH--HhcCCC
Q 028061           81 IALLCTNASPSLRPTMSEVVSM--LEGSSN  108 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~--L~~~~~  108 (214)
                      |+.+++..||+.|-++.+|++.  |.+...
T Consensus       242 LLr~ml~VDp~~RiT~~eI~kHP~l~g~~~  271 (786)
T KOG0588|consen  242 LLRRMLDVDPSTRITTEEILKHPFLSGYTS  271 (786)
T ss_pred             HHHHHhccCccccccHHHHhhCchhhcCCC
Confidence            9999999999999999999874  555443

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.84  E-value=4.7e-09  Score=90.03  Aligned_cols=87  Identities=24%  Similarity=0.315  Sum_probs=68.5

Q ss_pred             cccccccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            2 APEYALWGYLT-YKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         2 APE~~~~~~~t-~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      |||.+.+..|. ++.||||+||+|+-+++|+.||.....               .+.+-.++|.++  ..|.....++.+
T Consensus       186 APEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND---------------SETLTmImDCKY--tvPshvS~eCrd  248 (864)
T KOG4717|consen  186 APEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND---------------SETLTMIMDCKY--TVPSHVSKECRD  248 (864)
T ss_pred             CchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc---------------hhhhhhhhcccc--cCchhhhHHHHH
Confidence            89999887764 689999999999999999999963222               233455566555  346667789999


Q ss_pred             HHHHhhccCCCCCCCHHHHHH--HHhc
Q 028061           81 IALLCTNASPSLRPTMSEVVS--MLEG  105 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~--~L~~  105 (214)
                      |+..++..||.+|.+..+|+.  +|+.
T Consensus       249 LI~sMLvRdPkkRAslEeI~s~~Wlq~  275 (864)
T KOG4717|consen  249 LIQSMLVRDPKKRASLEEIVSTSWLQA  275 (864)
T ss_pred             HHHHHHhcCchhhccHHHHhccccccC
Confidence            999999999999999999974  4544

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.84  E-value=3.6e-09  Score=92.75  Aligned_cols=87  Identities=20%  Similarity=0.288  Sum_probs=60.7

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      ||||++.     ...|.-++|||||||.|.||.-+.+|.....+      +....+.      .+.-.|.+  ..|....
T Consensus       197 MAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp------MRVllKi------aKSePPTL--lqPS~Ws  262 (1187)
T KOG0579|consen  197 MAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKI------AKSEPPTL--LQPSHWS  262 (1187)
T ss_pred             ccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch------HHHHHHH------hhcCCCcc--cCcchhh
Confidence            8999876     46899999999999999999999988642211      1111111      11111111  1233445


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+.+++.+|+..+|..||+..++++
T Consensus       263 ~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  263 RSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             hHHHHHHHHHHhcCCccCCCHHHHhh
Confidence            57899999999999999999999874

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.84  E-value=5.7e-09  Score=84.98  Aligned_cols=88  Identities=17%  Similarity=0.220  Sum_probs=56.7

Q ss_pred             Cccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~--~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      +|||++..  ..++.++||||||++++|+++|+.||.......  ...........       ..    .+.+......+
T Consensus       173 ~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~--~~~~~~~~~~~-------~~----~~~~~~~~~~~  239 (290)
T cd05613         173 MAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN--SQAEISRRILK-------SE----PPYPQEMSALA  239 (290)
T ss_pred             CChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc--cHHHHHHHhhc-------cC----CCCCccCCHHH
Confidence            58998864  346789999999999999999999985322111  11111111100       00    11222344578


Q ss_pred             HHHHHHhhccCCCCCC-----CHHHHHH
Q 028061           79 IKIALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      ..++.+||+.+|++||     +..+++.
T Consensus       240 ~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         240 KDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             HHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence            8999999999999997     5555543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.84  E-value=6.9e-10  Score=103.26  Aligned_cols=87  Identities=24%  Similarity=0.333  Sum_probs=62.5

Q ss_pred             CcccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALWG---YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~~---~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      ||||++.+.   .-..+.||||+|||++||+||++|+.....       +|+...        -+-.+-.+..|.....+
T Consensus      1405 MAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-------e~aIMy--------~V~~gh~Pq~P~~ls~~ 1469 (1509)
T KOG4645|consen 1405 MAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-------EWAIMY--------HVAAGHKPQIPERLSSE 1469 (1509)
T ss_pred             cCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-------hhHHHh--------HHhccCCCCCchhhhHh
Confidence            899999743   234578999999999999999999853221       233221        12222234555556678


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      -.+++.+|+..||++|=++.|+++.
T Consensus      1470 g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1470 GRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             HHHHHHHHHhcCchhhhHHHHHHHh
Confidence            8999999999999999888777654

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.84  E-value=4.7e-09  Score=91.71  Aligned_cols=35  Identities=26%  Similarity=0.315  Sum_probs=32.7

Q ss_pred             cccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            2 APEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         2 APE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      |||++.+..|+.+.|+||||||+.||++|.+-|..
T Consensus       356 APEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG  390 (586)
T KOG0667|consen  356 APEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG  390 (586)
T ss_pred             cchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence            89999999999999999999999999999877754

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.84  E-value=1.7e-09  Score=92.84  Aligned_cols=85  Identities=14%  Similarity=0.147  Sum_probs=62.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ++||++..+..+..+|+|+|||+|+.|+.|.+||....+.   ..            +.++++-.+  .++...+..+.+
T Consensus       254 VSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney---li------------FqkI~~l~y--~fp~~fp~~a~d  316 (604)
T KOG0592|consen  254 VSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY---LI------------FQKIQALDY--EFPEGFPEDARD  316 (604)
T ss_pred             cCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH---HH------------HHHHHHhcc--cCCCCCCHHHHH
Confidence            4799999999999999999999999999999999532211   00            112221111  222223357889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      |+.+.+..||.+|++..+|.+.
T Consensus       317 Lv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  317 LIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             HHHHHHccCccccccHHHHhhC
Confidence            9999999999999999999764

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=98.83  E-value=3.2e-09  Score=85.62  Aligned_cols=99  Identities=13%  Similarity=0.194  Sum_probs=63.6

Q ss_pred             ccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHH--------H-hhcCccccccCCcc-----
Q 028061            2 APEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFH--------L-HQSGTLMEFVDPRL-----   66 (214)
Q Consensus         2 APE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~-----   66 (214)
                      |||.+.+ ..|....|||+.||++.||++|.+-|.....-+..+++.....        . ..+..+..+.-|..     
T Consensus       169 aPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~ep  248 (396)
T KOG0593|consen  169 APELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEP  248 (396)
T ss_pred             ChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccc
Confidence            7998876 7999999999999999999999988865554443333222111        1 11111111111111     


Q ss_pred             -CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           67 -GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        67 -~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                       ...+ +....-+++++..|++.||++|++.++++.
T Consensus       249 Le~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  249 LERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             hhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence             0111 122336789999999999999999999873

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.83  E-value=4.7e-09  Score=88.58  Aligned_cols=36  Identities=25%  Similarity=0.334  Sum_probs=33.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      ||||++.+..++.++|||||||+++||++|+.||..
T Consensus       203 ~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~  238 (363)
T cd05628         203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (363)
T ss_pred             cCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence            689999988999999999999999999999999963

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.82  E-value=2.7e-09  Score=86.05  Aligned_cols=87  Identities=21%  Similarity=0.222  Sum_probs=65.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCcccccc-CCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFV-DPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..-.|..++||||+||...||..|++||....+..               .+.-+- .|...=..|.....++.
T Consensus       196 MAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR---------------AIFMIPT~PPPTF~KPE~WS~~F~  260 (502)
T KOG0574|consen  196 MAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR---------------AIFMIPTKPPPTFKKPEEWSSEFN  260 (502)
T ss_pred             ccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc---------------eeEeccCCCCCCCCChHhhhhHHH
Confidence            89999999999999999999999999999999997443321               111111 11111122455677899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      +++..|+-.+|++|.++.++++.
T Consensus       261 DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  261 DFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             HHHHHHhcCCHHHHHHHHHHhhh
Confidence            99999999999999999988753

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.82  E-value=2.5e-09  Score=93.98  Aligned_cols=79  Identities=18%  Similarity=0.235  Sum_probs=61.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....|+...|.|+|||+|+||+.|..||....+++               ....++...  ..+|.....+...
T Consensus       535 ~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee---------------~FdsI~~d~--~~yP~~ls~ea~~  597 (694)
T KOG0694|consen  535 LAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE---------------VFDSIVNDE--VRYPRFLSKEAIA  597 (694)
T ss_pred             cChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH---------------HHHHHhcCC--CCCCCcccHHHHH
Confidence            79999999999999999999999999999999996433221               011222211  2345556778999


Q ss_pred             HHHHhhccCCCCCCCH
Q 028061           81 IALLCTNASPSLRPTM   96 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~   96 (214)
                      ++.+.+..+|++|..+
T Consensus       598 il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  598 IMRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHHHHhccCcccccCC
Confidence            9999999999999876

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.80  E-value=1.6e-09  Score=91.87  Aligned_cols=88  Identities=17%  Similarity=0.145  Sum_probs=55.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||......      ....... ..      ......+........+.+
T Consensus       211 ~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~-~~------~~~~~~~~~~~~s~~~~~  277 (376)
T cd05598         211 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPA------ETQLKVI-NW------ETTLHIPSQAKLSREASD  277 (376)
T ss_pred             cCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHH------HHHHHHh-cc------CccccCCCCCCCCHHHHH
Confidence            6899999889999999999999999999999999643211      1110110 00      000000001112335666


Q ss_pred             HHHHhhccCCCCCC---CHHHHHHH
Q 028061           81 IALLCTNASPSLRP---TMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RP---s~~~v~~~  102 (214)
                      ++.+|+ .+|.+|+   ++.+++..
T Consensus       278 li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         278 LILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             HHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            777765 4999999   78888743

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=98.79  E-value=2.1e-09  Score=88.32  Aligned_cols=78  Identities=19%  Similarity=0.167  Sum_probs=56.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....|+..+|.||+||+++||++|.+||......      .+         ...++..++ ...+.....+...
T Consensus       192 mAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~------~~---------~~~I~~~k~-~~~p~~ls~~ard  255 (357)
T KOG0598|consen  192 MAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK------KM---------YDKILKGKL-PLPPGYLSEEARD  255 (357)
T ss_pred             cChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH------HH---------HHHHhcCcC-CCCCccCCHHHHH
Confidence            8999999999999999999999999999999999642211      11         112222221 1112223447888


Q ss_pred             HHHHhhccCCCCCC
Q 028061           81 IALLCTNASPSLRP   94 (214)
Q Consensus        81 l~~~C~~~~p~~RP   94 (214)
                      ++.+.+..+|++|-
T Consensus       256 ll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  256 LLKKLLKRDPRQRL  269 (357)
T ss_pred             HHHHHhccCHHHhc
Confidence            99999999999995

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.76  E-value=1.3e-09  Score=92.34  Aligned_cols=88  Identities=15%  Similarity=0.023  Sum_probs=56.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++|+++|..||.......      .........       ..+.-+........+.+
T Consensus       215 ~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~------~~~~i~~~~-------~~~~~p~~~~~s~~~~d  281 (377)
T cd05629         215 IAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHE------TYRKIINWR-------ETLYFPDDIHLSVEAED  281 (377)
T ss_pred             cCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHH------HHHHHHccC-------CccCCCCCCCCCHHHHH
Confidence            68999988899999999999999999999999996322110      000110000       00000000112346788


Q ss_pred             HHHHhhccCCCCC---CCHHHHHHH
Q 028061           81 IALLCTNASPSLR---PTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~R---Ps~~~v~~~  102 (214)
                      ++.+|+. +|.+|   +++.+++..
T Consensus       282 li~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         282 LIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             HHHHHhc-CHhhcCCCCCHHHHhcC
Confidence            9999997 66665   588888753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.76  E-value=5e-09  Score=82.31  Aligned_cols=88  Identities=14%  Similarity=0.095  Sum_probs=62.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||+++...|+..+|||+.||+|+-++.|..||......   .+.    .....+.      -.+.++......+...+
T Consensus       179 maPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~---rly----e~I~~g~------yd~~~~~w~~is~~Ak~  245 (355)
T KOG0033|consen  179 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLY----EQIKAGA------YDYPSPEWDTVTPEAKS  245 (355)
T ss_pred             cCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH---HHH----HHHhccc------cCCCCcccCcCCHHHHH
Confidence            7999999999999999999999999999999999642111   011    1111111      11122222334457889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+++..||.+|.++.+.++
T Consensus       246 LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  246 LIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             HHHHHhccChhhhccHHHHhC
Confidence            999999999999999998864

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.75  E-value=4.4e-09  Score=89.36  Aligned_cols=36  Identities=31%  Similarity=0.383  Sum_probs=33.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      ||||++.+..++.++|||||||+++||++|+.||..
T Consensus       215 ~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~  250 (382)
T cd05625         215 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLA  250 (382)
T ss_pred             CCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCC
Confidence            689999988999999999999999999999999964

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=98.75  E-value=8.2e-10  Score=91.12  Aligned_cols=100  Identities=19%  Similarity=0.227  Sum_probs=63.9

Q ss_pred             cccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHH--------------HHhhcCccc--------
Q 028061            2 APEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF--------------HLHQSGTLM--------   59 (214)
Q Consensus         2 APE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~--------------~~~~~~~~~--------   59 (214)
                      |||++.+..++.++||||+||||.|+++|...|......+....++.+.              +....+.+.        
T Consensus       277 APEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~  356 (415)
T KOG0671|consen  277 APEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKG  356 (415)
T ss_pred             CchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccc
Confidence            8999999999999999999999999999999887544322111111110              000001000        


Q ss_pred             ---cccCCcc----CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           60 ---EFVDPRL----GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        60 ---~~~~~~~----~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                         .+.++..    ...........+.+|+.+++..||.+|+|+.+++.
T Consensus       357 ~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  357 KSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             cchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence               0000000    00112234557999999999999999999999875

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=98.73  E-value=1.8e-09  Score=90.02  Aligned_cols=87  Identities=22%  Similarity=0.253  Sum_probs=63.3

Q ss_pred             CcccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCcc--CCCCCHHHH
Q 028061            1 MAPEYALWG---YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRL--GSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~~~---~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~   75 (214)
                      +|||++..+   .+..|.|+||+||||+-+++|..||+.......  +            ...+...++  .+.......
T Consensus       345 vAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s--l------------~eQI~~G~y~f~p~~w~~Is  410 (475)
T KOG0615|consen  345 VAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS--L------------KEQILKGRYAFGPLQWDRIS  410 (475)
T ss_pred             cChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc--H------------HHHHhcCcccccChhhhhhh
Confidence            599999854   344588999999999999999999975433210  0            112222222  233445567


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+...|+.+++..||+.||++.+++.
T Consensus       411 eea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  411 EEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             HHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            78999999999999999999999985

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.73  E-value=6.1e-08  Score=82.59  Aligned_cols=100  Identities=19%  Similarity=0.250  Sum_probs=68.2

Q ss_pred             cccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCC----ch---hHHH----HHHh-----------hcCccc
Q 028061            2 APEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCT----CP---LDWA----FHLH-----------QSGTLM   59 (214)
Q Consensus         2 APE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~----~~---~~~~----~~~~-----------~~~~~~   59 (214)
                      |||++.+..|+..+|+|||+|+++||+||-..|+......-.    ++   ++..    +.+.           ..|.+.
T Consensus       419 apEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~Lr  498 (590)
T KOG1290|consen  419 APEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELR  498 (590)
T ss_pred             CcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhcccccee
Confidence            799999999999999999999999999998877654433211    11   1110    1111           112222


Q ss_pred             cccCCccC---------CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           60 EFVDPRLG---------SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        60 ~~~~~~~~---------~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+-+-+..         =.++.+...++.+++.-+++.+|++||++.+.++
T Consensus       499 hI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~  549 (590)
T KOG1290|consen  499 HIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK  549 (590)
T ss_pred             cccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence            11111110         1456778889999999999999999999999885

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.73  E-value=1.9e-09  Score=88.28  Aligned_cols=110  Identities=18%  Similarity=0.107  Sum_probs=66.4

Q ss_pred             cccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHH--------HhhcCccccccC---CccCCC
Q 028061            2 APEYAL-WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFH--------LHQSGTLMEFVD---PRLGSE   69 (214)
Q Consensus         2 APE~~~-~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~---~~~~~~   69 (214)
                      |||++. ...||...||||.||++.||++|++-|.......+..++-....        ..........+.   .....+
T Consensus       195 APElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~  274 (359)
T KOG0660|consen  195 APELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQP  274 (359)
T ss_pred             CHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCC
Confidence            789765 56899999999999999999999998865443332221111100        000000111111   000000


Q ss_pred             C---CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH--HhcCCCCCC
Q 028061           70 F---NKVEAERMIKIALLCTNASPSLRPTMSEVVSM--LEGSSNIPD  111 (214)
Q Consensus        70 ~---~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~--L~~~~~~~~  111 (214)
                      +   -+.......+|+.+++..||.+|+|..+.+..  |....+..+
T Consensus       275 f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~d  321 (359)
T KOG0660|consen  275 FSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPED  321 (359)
T ss_pred             HHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCcc
Confidence            0   01233468899999999999999999999863  555444433

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.72  E-value=3.6e-09  Score=89.73  Aligned_cols=90  Identities=14%  Similarity=0.136  Sum_probs=55.1

Q ss_pred             CcccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHH
Q 028061            1 MAPEYALWG----YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAE   76 (214)
Q Consensus         1 mAPE~~~~~----~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (214)
                      ||||++...    .++.++|||||||+++||++|+.||.....      ...............+       +.......
T Consensus       210 ~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~~~~~-------~~~~~~s~  276 (371)
T cd05622         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMNHKNSLTF-------PDDNDISK  276 (371)
T ss_pred             cCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCcccC-------CCcCCCCH
Confidence            689998743    488999999999999999999999963211      1111111110000000       11112344


Q ss_pred             HHHHHHHHhhccCCCC--CCCHHHHHHHH
Q 028061           77 RMIKIALLCTNASPSL--RPTMSEVVSML  103 (214)
Q Consensus        77 ~~~~l~~~C~~~~p~~--RPs~~~v~~~L  103 (214)
                      .+..++.+|+..++.+  |+++.++++..
T Consensus       277 ~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         277 EAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             HHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence            6788999999843332  67888887643

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.72  E-value=3.1e-08  Score=83.00  Aligned_cols=100  Identities=20%  Similarity=0.207  Sum_probs=58.2

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCC---------chhHHHHHHhhcCccccccC--CccCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCT---------CPLDWAFHLHQSGTLMEFVD--PRLGS   68 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~--~~~~~   68 (214)
                      +|||++.. ..++.++||||||++++++++|+.||.........         ....+.... ........+.  +....
T Consensus       182 ~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  260 (343)
T cd07880         182 RAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKL-QSEDAKNYVKKLPRFRK  260 (343)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh-cchhHHHHHHhccccCc
Confidence            57998765 46889999999999999999999998632211000         000000000 0000000000  00000


Q ss_pred             ----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 ----EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                          .........+.+++.+|++.+|++||++.+++.
T Consensus       261 ~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         261 KDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             chHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                000112336789999999999999999999984

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.71  E-value=3.9e-09  Score=83.77  Aligned_cols=91  Identities=18%  Similarity=0.167  Sum_probs=59.5

Q ss_pred             Cccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~--~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||.+..  ..|..++||||+||.|+|+.+|+-||.....     ..+..... ..+....++.    +....+....+
T Consensus       234 mAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfeql~~V-v~gdpp~l~~----~~~~~~~s~~~  303 (361)
T KOG1006|consen  234 MAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFEQLCQV-VIGDPPILLF----DKECVHYSFSM  303 (361)
T ss_pred             cChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHHHHHHH-HcCCCCeecC----cccccccCHHH
Confidence            89998873  3589999999999999999999999852110     11111111 0111111111    11112244578


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..++..|+..|-..||.+.++++
T Consensus       304 ~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  304 VRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             HHHHHHHhhcccccCcchhhhhc
Confidence            99999999999999999998875

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.71  E-value=3.3e-09  Score=89.93  Aligned_cols=87  Identities=15%  Similarity=0.148  Sum_probs=54.9

Q ss_pred             CcccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCC--HHH
Q 028061            1 MAPEYALWG----YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFN--KVE   74 (214)
Q Consensus         1 mAPE~~~~~----~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~   74 (214)
                      ||||++...    .++.++||||+||+++||++|+.||.....      ....         ..+++.......+  ...
T Consensus       210 ~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~------~~~~---------~~i~~~~~~~~~p~~~~~  274 (370)
T cd05621         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL------VGTY---------SKIMDHKNSLNFPEDVEI  274 (370)
T ss_pred             CCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH------HHHH---------HHHHhCCcccCCCCcccC
Confidence            689998643    478999999999999999999999953221      1111         1111111000111  122


Q ss_pred             HHHHHHHHHHhhccCCC--CCCCHHHHHHH
Q 028061           75 AERMIKIALLCTNASPS--LRPTMSEVVSM  102 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~--~RPs~~~v~~~  102 (214)
                      ...+..++.+|+..++.  .|+++.++++.
T Consensus       275 s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         275 SKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             CHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            44677888888875443  38899988764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.71  E-value=3.4e-09  Score=88.33  Aligned_cols=90  Identities=11%  Similarity=0.041  Sum_probs=54.1

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      ||||++.     .+.++.++|||||||+++||++|+.||.....      ...........     .+... +.......
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~------~~~~~~i~~~~-----~~~~~-p~~~~~~s  237 (332)
T cd05623         170 ISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHK-----ERFQF-PAQVTDVS  237 (332)
T ss_pred             cCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH------HHHHHHHhCCC-----ccccC-CCccccCC
Confidence            6899886     35688999999999999999999999863211      11111111000     00000 11111234


Q ss_pred             HHHHHHHHHhhccCC--CCCCCHHHHHHH
Q 028061           76 ERMIKIALLCTNASP--SLRPTMSEVVSM  102 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p--~~RPs~~~v~~~  102 (214)
                      ..+.+++.+|+..++  ..|+++.++++.
T Consensus       238 ~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         238 EDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             HHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            467788888775443  346888888754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=98.70  E-value=4.2e-09  Score=90.26  Aligned_cols=86  Identities=16%  Similarity=0.157  Sum_probs=60.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC-CCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSN-CTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+..|+..+|.||+|||++|++.|-+||+...+.+ ...+..|...+..              +....+..+..
T Consensus       355 iAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~f--------------P~~~~~s~eA~  420 (550)
T KOG0605|consen  355 IAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKF--------------PEEVDLSDEAK  420 (550)
T ss_pred             cchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccC--------------CCcCcccHHHH
Confidence            79999999999999999999999999999999997544322 1222222211110              11112235789


Q ss_pred             HHHHHhhccCCCCCCC---HHHHHH
Q 028061           80 KIALLCTNASPSLRPT---MSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs---~~~v~~  101 (214)
                      +|+.+|+. ||+.|-.   +.||.+
T Consensus       421 DLI~rll~-d~~~RLG~~G~~EIK~  444 (550)
T KOG0605|consen  421 DLITRLLC-DPENRLGSKGAEEIKK  444 (550)
T ss_pred             HHHHHHhc-CHHHhcCcccHHHHhc
Confidence            99999998 9999965   566653

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.70  E-value=1.2e-09  Score=92.07  Aligned_cols=36  Identities=25%  Similarity=0.334  Sum_probs=33.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      ||||++.+..++.++|||||||+++||++|+.||..
T Consensus       203 ~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~  238 (360)
T cd05627         203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (360)
T ss_pred             cCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence            689999988999999999999999999999999964

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.70  E-value=7.3e-09  Score=86.23  Aligned_cols=37  Identities=30%  Similarity=0.437  Sum_probs=35.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV   37 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~   37 (214)
                      ||||+++..+|+.|+|+||.|+++|++++|+.||...
T Consensus       181 MAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~  217 (429)
T KOG0595|consen  181 MAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE  217 (429)
T ss_pred             cCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence            8999999999999999999999999999999999743

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.68  E-value=7.3e-09  Score=86.36  Aligned_cols=90  Identities=12%  Similarity=0.068  Sum_probs=52.9

Q ss_pred             Cccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYALW-----GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~~-----~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      ||||++..     +.++.++|||||||+++||++|+.||.....      .+.............     +. ......+
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~------~~~~~~i~~~~~~~~-----~~-~~~~~~~  237 (331)
T cd05597         170 ISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHKEHFQ-----FP-PDVTDVS  237 (331)
T ss_pred             cCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH------HHHHHHHHcCCCccc-----CC-CccCCCC
Confidence            68998863     4678899999999999999999999853211      111111111000000     10 0011133


Q ss_pred             HHHHHHHHHhhcc--CCCCCCCHHHHHHH
Q 028061           76 ERMIKIALLCTNA--SPSLRPTMSEVVSM  102 (214)
Q Consensus        76 ~~~~~l~~~C~~~--~p~~RPs~~~v~~~  102 (214)
                      ..+..++.+|+..  ++..|+++.+++..
T Consensus       238 ~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         238 EEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             HHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            4567777776643  44447888888754

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.64  E-value=4.3e-08  Score=83.16  Aligned_cols=110  Identities=19%  Similarity=0.105  Sum_probs=66.4

Q ss_pred             CcccccccC-CCC-----chhhHHHHHHHHHHHHcCCCCCCCCCCCCCC-chhHHHH-----HHhhcCccccccCCccCC
Q 028061            1 MAPEYALWG-YLT-----YKADVYSFGVVALEIVSGKNNMSYVPDSNCT-CPLDWAF-----HLHQSGTLMEFVDPRLGS   68 (214)
Q Consensus         1 mAPE~~~~~-~~t-----~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~   68 (214)
                      ||||++.+. .+.     .+.||||.|.|||||+++..-+......+.+ -+...+.     .-++.-.+.+..+|.++.
T Consensus       385 MAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~  464 (534)
T KOG3653|consen  385 MAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPD  464 (534)
T ss_pred             cCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChh
Confidence            899998753 222     4789999999999999987655321111110 0110000     001111123333444433


Q ss_pred             CCCHH-HHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcCCCCC
Q 028061           69 EFNKV-EAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIP  110 (214)
Q Consensus        69 ~~~~~-~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~~  110 (214)
                      .+... ...-+.+.+..||+.|++.|-|+.-|.+++..+..+.
T Consensus       465 ~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~  507 (534)
T KOG3653|consen  465 AWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW  507 (534)
T ss_pred             hhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence            33222 3345778999999999999999999998888765543

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.64  E-value=5.5e-09  Score=87.11  Aligned_cols=89  Identities=11%  Similarity=0.074  Sum_probs=53.1

Q ss_pred             Cccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYALW-----GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~~-----~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      ||||++..     +.++.++|||||||+++||++|+.||.....      ...........     ....+ +.......
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~------~~~~~~i~~~~-----~~~~~-p~~~~~~~  237 (331)
T cd05624         170 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHE-----ERFQF-PSHITDVS  237 (331)
T ss_pred             CCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH------HHHHHHHHcCC-----CcccC-CCccccCC
Confidence            68998875     5688999999999999999999999853211      11111111000     00001 01111234


Q ss_pred             HHHHHHHHHhhccCCCC--CCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSL--RPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~--RPs~~~v~~  101 (214)
                      ..+.+++.+|+..++++  |+++.++++
T Consensus       238 ~~~~~li~~ll~~~~~~~~~~~~~~~~~  265 (331)
T cd05624         238 EEAKDLIQRLICSRERRLGQNGIEDFKK  265 (331)
T ss_pred             HHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence            57788888888755433  456777664

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.59  E-value=5.4e-08  Score=82.71  Aligned_cols=87  Identities=18%  Similarity=0.123  Sum_probs=66.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCC--ccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDP--RLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   78 (214)
                      +|||++....|+...||||.||+++.|++|..||........               ...+...  .+..+........+
T Consensus       205 ~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~---------------~~~i~~~~~~f~~~~w~~is~~a  269 (382)
T KOG0032|consen  205 VAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI---------------FLAILRGDFDFTSEPWDDISESA  269 (382)
T ss_pred             cCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH---------------HHHHHcCCCCCCCCCccccCHHH
Confidence            699999989999999999999999999999999964332210               1111111  22233334456788


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ..++..++..||.+|+++.++++.
T Consensus       270 kd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  270 KDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             HHHHHHhcccCcccCCCHHHHhcC
Confidence            999999999999999999999984

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.56  E-value=6.7e-08  Score=75.61  Aligned_cols=85  Identities=18%  Similarity=0.181  Sum_probs=63.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ++||.+.+...+.+.|+|+.||+.+|++.|.+||......          ..     ..++..-++  ..|......+.+
T Consensus       189 l~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~----------et-----YkrI~k~~~--~~p~~is~~a~d  251 (281)
T KOG0580|consen  189 LPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS----------ET-----YKRIRKVDL--KFPSTISGGAAD  251 (281)
T ss_pred             CCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH----------HH-----HHHHHHccc--cCCcccChhHHH
Confidence            5899999999999999999999999999999999643211          11     111111111  223344558899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+|+..+|.+|....+++..
T Consensus       252 lI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  252 LISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             HHHHHhccCccccccHHHHhhh
Confidence            9999999999999999998753

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.53  E-value=1.4e-07  Score=84.38  Aligned_cols=26  Identities=4%  Similarity=-0.118  Sum_probs=23.1

Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           77 RMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        77 ~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ...+|+.+|++.||++||++.++++.
T Consensus       425 ~~~dLi~~mL~~dP~kR~ta~e~L~H  450 (566)
T PLN03225        425 AGWELLKSMMRFKGRQRISAKAALAH  450 (566)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhCC
Confidence            45689999999999999999999864

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=98.48  E-value=6.1e-08  Score=82.05  Aligned_cols=81  Identities=21%  Similarity=0.244  Sum_probs=58.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCcc---CCCCCHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRL---GSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   77 (214)
                      ||||++..+.|+...|.|++||+++||+.|+.||........                .+-+|.+.   ..+++.....+
T Consensus       353 MAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk----------------~eEvdrr~~~~~~ey~~kFS~e  416 (591)
T KOG0986|consen  353 MAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK----------------REEVDRRTLEDPEEYSDKFSEE  416 (591)
T ss_pred             cCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh----------------HHHHHHHHhcchhhcccccCHH
Confidence            899999999999999999999999999999999953322211                11111111   12344455667


Q ss_pred             HHHHHHHhhccCCCCCCCHH
Q 028061           78 MIKIALLCTNASPSLRPTMS   97 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~   97 (214)
                      ...+...-++.||.+|..+.
T Consensus       417 akslc~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  417 AKSLCEGLLTKDPEKRLGCR  436 (591)
T ss_pred             HHHHHHHHHccCHHHhccCC
Confidence            88888888999999997654

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.47  E-value=2.5e-07  Score=73.99  Aligned_cols=88  Identities=15%  Similarity=0.139  Sum_probs=61.8

Q ss_pred             Ccccccc------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHH
Q 028061            1 MAPEYAL------WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVE   74 (214)
Q Consensus         1 mAPE~~~------~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (214)
                      +|||.++      ...|+...|.|+.||+++-++.|++||......       ....+...|.      -.+..+...+.
T Consensus       189 LAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm-------lMLR~ImeGk------yqF~speWadi  255 (411)
T KOG0599|consen  189 LAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM-------LMLRMIMEGK------YQFRSPEWADI  255 (411)
T ss_pred             cChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH-------HHHHHHHhcc------cccCCcchhhc
Confidence            5899886      236888999999999999999999998421100       0011111111      11233334456


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           75 AERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ...+.+|+.+|++.||.+|-+.++++.
T Consensus       256 s~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  256 SATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             cccHHHHHHHHHeeCchhcccHHHHhc
Confidence            678999999999999999999999875

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.46  E-value=1.8e-07  Score=87.17  Aligned_cols=86  Identities=24%  Similarity=0.313  Sum_probs=52.9

Q ss_pred             CcccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALWG---YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~~---~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||++...   +|+.|+|+||+|||++||+.   ||...     +.-+.....+ +.+.+...      ..+.......
T Consensus       782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts-----MERa~iL~~L-R~g~iP~~------~~f~~~~~~~  846 (1351)
T KOG1035|consen  782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTS-----MERASILTNL-RKGSIPEP------ADFFDPEHPE  846 (1351)
T ss_pred             ecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCch-----HHHHHHHHhc-ccCCCCCC------cccccccchH
Confidence            589998743   69999999999999999985   34310     0001101111 11111111      0112222234


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      -..++.+.++.||.+||++.+++.
T Consensus       847 e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  847 EASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             HHHHHHHHhcCCCccCCCHHHHhh
Confidence            567888999999999999999874

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.45  E-value=1.1e-07  Score=80.94  Aligned_cols=89  Identities=19%  Similarity=0.207  Sum_probs=63.7

Q ss_pred             CcccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHH
Q 028061            1 MAPEYALWG----YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAE   76 (214)
Q Consensus         1 mAPE~~~~~----~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (214)
                      ||||.+..+    .-+.+.||||+||.||.++.|+.||....          ...+     ..+++...+.-+..++...
T Consensus       282 ~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~----------~~~l-----~~KIvn~pL~fP~~pe~~e  346 (576)
T KOG0585|consen  282 FAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF----------ELEL-----FDKIVNDPLEFPENPEINE  346 (576)
T ss_pred             cchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch----------HHHH-----HHHHhcCcccCCCcccccH
Confidence            799988763    24568899999999999999999995311          1111     2344444442222234566


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           77 RMIKIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        77 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      .+..|+++.+.+||+.|.+..+|+...-
T Consensus       347 ~~kDli~~lL~KdP~~Ri~l~~ik~Hpw  374 (576)
T KOG0585|consen  347 DLKDLIKRLLEKDPEQRITLPDIKLHPW  374 (576)
T ss_pred             HHHHHHHHHhhcChhheeehhhheecce
Confidence            8899999999999999999999976543

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.43  E-value=9.6e-08  Score=78.61  Aligned_cols=98  Identities=21%  Similarity=0.203  Sum_probs=62.4

Q ss_pred             ccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc---------CccccccCCccCC---
Q 028061            2 APEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS---------GTLMEFVDPRLGS---   68 (214)
Q Consensus         2 APE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~---   68 (214)
                      |||.+.+ ..|+.+.||||.|||+.||+.|+.-|......+.  +...+.-+...         ....+.-.+.+..   
T Consensus       193 aPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ--L~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~  270 (364)
T KOG0658|consen  193 APELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ--LVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPW  270 (364)
T ss_pred             CHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH--HHHHHHHhCCCCHHHHhhcCcccccccCcccccccc
Confidence            8998885 5899999999999999999999998865333221  11111110000         0000111111110   


Q ss_pred             --CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 --EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 --~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                        -+......+..+|+.+++..+|.+|.+..+++.
T Consensus       271 ~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  271 HKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             eeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence              122234457899999999999999999998874

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.41  E-value=1.1e-07  Score=76.51  Aligned_cols=76  Identities=13%  Similarity=0.160  Sum_probs=54.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||.+....++.++|.|+|||+++||+.|.+||....+.          ..     ..+++...+  .+|......+..
T Consensus       208 LAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~----------~i-----Y~KI~~~~v--~fP~~fs~~~kd  270 (355)
T KOG0616|consen  208 LAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI----------QI-----YEKILEGKV--KFPSYFSSDAKD  270 (355)
T ss_pred             cChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH----------HH-----HHHHHhCcc--cCCcccCHHHHH
Confidence            6999999999999999999999999999999999643321          11     122332222  234444446778


Q ss_pred             HHHHhhccCCCCC
Q 028061           81 IALLCTNASPSLR   93 (214)
Q Consensus        81 l~~~C~~~~p~~R   93 (214)
                      |+...++.|-.+|
T Consensus       271 Ll~~LL~vD~t~R  283 (355)
T KOG0616|consen  271 LLKKLLQVDLTKR  283 (355)
T ss_pred             HHHHHHhhhhHhh
Confidence            8888888887777

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=98.39  E-value=2.4e-07  Score=73.60  Aligned_cols=99  Identities=13%  Similarity=0.085  Sum_probs=61.6

Q ss_pred             ccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHh--hcC------ccccc-----cCCccC
Q 028061            2 APEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLH--QSG------TLMEF-----VDPRLG   67 (214)
Q Consensus         2 APE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~-----~~~~~~   67 (214)
                      |||.+.+ ..|+...|+||.||++.|++.|.+-|....+-++  +......+.  ...      .+.+.     ..+...
T Consensus       169 APELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQ--L~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~  246 (318)
T KOG0659|consen  169 APELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQ--LSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPL  246 (318)
T ss_pred             ChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHH--HHHHHHHcCCCCcccCccccccccHHHHhcCCCCcc
Confidence            7998875 5899999999999999999998876653322111  111110000  000      01111     111111


Q ss_pred             CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           68 SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        68 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ...-..+.....+|+...|..||.+|.+++|++++
T Consensus       247 ~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  247 NNLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             ccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence            11223355577999999999999999999999864

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.37  E-value=3.1e-07  Score=77.21  Aligned_cols=78  Identities=17%  Similarity=0.290  Sum_probs=56.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||.+.+..|....|.|+|||+|+|++.|+.||+.....+      .         +..+.+...  .+|.....+...
T Consensus       517 iAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e------l---------F~aI~ehnv--syPKslSkEAv~  579 (683)
T KOG0696|consen  517 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE------L---------FQAIMEHNV--SYPKSLSKEAVA  579 (683)
T ss_pred             cccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH------H---------HHHHHHccC--cCcccccHHHHH
Confidence            69999999999999999999999999999999997543322      0         111111111  344455567777


Q ss_pred             HHHHhhccCCCCCCC
Q 028061           81 IALLCTNASPSLRPT   95 (214)
Q Consensus        81 l~~~C~~~~p~~RPs   95 (214)
                      +...-+...|.+|..
T Consensus       580 ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  580 ICKGLLTKHPGKRLG  594 (683)
T ss_pred             HHHHHhhcCCccccC
Confidence            878888888888854

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.31  E-value=6.4e-07  Score=76.71  Aligned_cols=100  Identities=17%  Similarity=0.118  Sum_probs=61.3

Q ss_pred             ccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHH-----HhhcCccc--cccCCccC-C----
Q 028061            2 APEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFH-----LHQSGTLM--EFVDPRLG-S----   68 (214)
Q Consensus         2 APE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~-~----   68 (214)
                      |||++.+ ..|+.+.|+||.||||.||+.|++.|....+.++...+-..+.     .|....+.  ....+... .    
T Consensus       287 pPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~  366 (560)
T KOG0600|consen  287 PPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLR  366 (560)
T ss_pred             ChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHH
Confidence            7998885 5899999999999999999999998875444332211111110     11100111  11111100 0    


Q ss_pred             CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +.....+...+.|+...+..||++|.|+.+++.
T Consensus       367 E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  367 ETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             HHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            001112346788899999999999999998874

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.31  E-value=3.6e-07  Score=82.62  Aligned_cols=86  Identities=21%  Similarity=0.315  Sum_probs=64.5

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccC-CccCCCCCHHH
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVD-PRLGSEFNKVE   74 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   74 (214)
                      ||||++.     ...|+..+|+||+||+..|+.-|.+|+....+.               ..+..+.+ |......+...
T Consensus       190 MAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm---------------raLF~IpRNPPPkLkrp~kW  254 (953)
T KOG0587|consen  190 MAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM---------------RALFLIPRNPPPKLKRPKKW  254 (953)
T ss_pred             ccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh---------------hhhccCCCCCCccccchhhH
Confidence            8999987     346889999999999999999999998643332               12233322 22222335566


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           75 AERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ...+.+++..|+..|-+.||++.++++
T Consensus       255 s~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  255 SKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             HHHHHHHHHHHHhhccccCcchhhhcc
Confidence            778999999999999999999998864

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=98.24  E-value=1.1e-06  Score=71.05  Aligned_cols=99  Identities=15%  Similarity=0.140  Sum_probs=66.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCc---cCCCCCHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPR---LGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   77 (214)
                      .|||++...+|....|.||+||++|-|++|-+||........   .         ......+..+   +..+...+..+.
T Consensus       230 vaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai---s---------pgMk~rI~~gqy~FP~pEWs~VSe~  297 (400)
T KOG0604|consen  230 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---S---------PGMKRRIRTGQYEFPEPEWSCVSEA  297 (400)
T ss_pred             cCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC---C---------hhHHhHhhccCccCCChhHhHHHHH
Confidence            489999999999999999999999999999999964332110   0         0011111111   111222334556


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH--HHhcCCCCCC
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS--MLEGSSNIPD  111 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~--~L~~~~~~~~  111 (214)
                      ..+++...+..+|.+|.++.+++.  .+.....++.
T Consensus       298 aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~  333 (400)
T KOG0604|consen  298 AKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQ  333 (400)
T ss_pred             HHHHHHHHhcCCchhheeHHHhhcCchhcccccCCC
Confidence            777888889999999999999985  3544444433

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=98.23  E-value=1e-06  Score=75.84  Aligned_cols=86  Identities=17%  Similarity=0.278  Sum_probs=60.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+.+......+|.|++||+++|+++|.+||....+..   ....         +.+-+|.   -.+|........+
T Consensus       586 VAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk---tYn~---------ILkGid~---i~~Pr~I~k~a~~  650 (732)
T KOG0614|consen  586 VAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK---TYNL---------ILKGIDK---IEFPRRITKTATD  650 (732)
T ss_pred             ccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH---HHHH---------HHhhhhh---hhcccccchhHHH
Confidence            58999988889999999999999999999999997433221   1111         1111111   2345556667888


Q ss_pred             HHHHhhccCCCCCCC-----HHHHHH
Q 028061           81 IALLCTNASPSLRPT-----MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs-----~~~v~~  101 (214)
                      |+++.+..+|.+|..     +.+|.+
T Consensus       651 Lik~LCr~~P~ERLG~~~~gI~DIkk  676 (732)
T KOG0614|consen  651 LIKKLCRDNPTERLGYQKGGINDIKK  676 (732)
T ss_pred             HHHHHHhcCcHhhhccccCChHHHHh
Confidence            888888889999975     555543

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.08  E-value=1.6e-06  Score=71.02  Aligned_cols=77  Identities=19%  Similarity=0.220  Sum_probs=54.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCcccccc-CCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFV-DPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++...-|....|.|..|||++||++|+.||.......                +.+++ -..+  .+|.....+..
T Consensus       335 LAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k----------------LFeLIl~ed~--kFPr~ls~eAk  396 (516)
T KOG0690|consen  335 LAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK----------------LFELILMEDL--KFPRTLSPEAK  396 (516)
T ss_pred             cCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH----------------HHHHHHhhhc--cCCccCCHHHH
Confidence            58999999999999999999999999999999997543322                11111 0001  12333334677


Q ss_pred             HHHHHhhccCCCCCCC
Q 028061           80 KIALLCTNASPSLRPT   95 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs   95 (214)
                      .|+...+..||.+|..
T Consensus       397 tLLsGLL~kdP~kRLG  412 (516)
T KOG0690|consen  397 TLLSGLLKKDPKKRLG  412 (516)
T ss_pred             HHHHHHhhcChHhhcC
Confidence            7888889999999953

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.06  E-value=1.1e-06  Score=79.27  Aligned_cols=84  Identities=24%  Similarity=0.262  Sum_probs=57.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....-+.+.|+||+|||++.+++ |..||......+ .++.      .....+..     +  ....++  ...
T Consensus       681 ~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-~NIl------~~~~~L~~-----L--~~~~d~--eA~  744 (903)
T KOG1027|consen  681 QAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-ANIL------TGNYTLVH-----L--EPLPDC--EAK  744 (903)
T ss_pred             cCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh-hhhh------cCccceee-----e--ccCchH--HHH
Confidence            59999998888889999999999999998 478885322111 0000      00000111     0  111112  678


Q ss_pred             HHHHHhhccCCCCCCCHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVV  100 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~  100 (214)
                      +|+.++++.+|..||++.+|+
T Consensus       745 dLI~~ml~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  745 DLISRMLNPDPQLRPSATDVL  765 (903)
T ss_pred             HHHHHhcCCCcccCCCHHHHh
Confidence            899999999999999999997

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=98.01  E-value=6.4e-06  Score=67.61  Aligned_cols=97  Identities=20%  Similarity=0.230  Sum_probs=60.1

Q ss_pred             ccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc--Ccc------ccccC---------
Q 028061            2 APEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS--GTL------MEFVD---------   63 (214)
Q Consensus         2 APE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~---------   63 (214)
                      |||.+.+ ..|+...|+||+|||+.|++.+++-|.....-++.   +.+..+...  ..+      ...+.         
T Consensus       245 aPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl---~~If~llGtPte~iwpg~~~lp~~k~~~f~~~py  321 (419)
T KOG0663|consen  245 APELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQL---DKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPY  321 (419)
T ss_pred             CHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHH---HHHHHHhCCCccccCCCccccchhhccccCCCCc
Confidence            7998875 57999999999999999999999888654433211   111111100  000      00000         


Q ss_pred             CccCCCCCHH-HHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           64 PRLGSEFNKV-EAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        64 ~~~~~~~~~~-~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..++..++.. ....-++|+...+..||.+|-|+++.++
T Consensus       322 n~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  322 NNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             hhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence            0011111111 2346778889999999999999999875

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.00  E-value=9.4e-06  Score=66.85  Aligned_cols=85  Identities=18%  Similarity=0.258  Sum_probs=57.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCC-CchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNC-TCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+++..|....|.|++||+++||+.|+.||+....... .+-.++..+..-..        .+  ..|.....+..
T Consensus       418 iapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek--------qi--riprslsvkas  487 (593)
T KOG0695|consen  418 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK--------QI--RIPRSLSVKAS  487 (593)
T ss_pred             cchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh--------cc--cccceeehhhH
Confidence            589999999999999999999999999999999986543322 22233333222111        11  11222333566


Q ss_pred             HHHHHhhccCCCCCCC
Q 028061           80 KIALLCTNASPSLRPT   95 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs   95 (214)
                      .+++.-++.||.+|..
T Consensus       488 ~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  488 HVLKGFLNKDPKERLG  503 (593)
T ss_pred             HHHHHhhcCCcHHhcC
Confidence            7888889999999854

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.00  E-value=4.2e-06  Score=68.72  Aligned_cols=98  Identities=15%  Similarity=0.190  Sum_probs=59.9

Q ss_pred             cccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---ccc---cccCCc--cCC----
Q 028061            2 APEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---TLM---EFVDPR--LGS----   68 (214)
Q Consensus         2 APE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~--~~~----   68 (214)
                      |||++.+. .|+...|+||+||++.||++++.-|......+   ....+.......   ...   ...+-+  ...    
T Consensus       188 aPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~---ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~  264 (323)
T KOG0594|consen  188 APEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID---QLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGP  264 (323)
T ss_pred             CHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH---HHHHHHHHcCCCCccCCCCccccccccccCcCCCCc
Confidence            79998865 79999999999999999999988886433211   111111111000   000   000100  000    


Q ss_pred             -CCCHHHH---HHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           69 -EFNKVEA---ERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        69 -~~~~~~~---~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                       ......+   ....+++.+|++.+|.+|.++..++.+
T Consensus       265 ~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  265 KDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             cchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence             0001111   368899999999999999999998864

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=97.92  E-value=7.5e-06  Score=66.98  Aligned_cols=99  Identities=18%  Similarity=0.198  Sum_probs=60.9

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCC----
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFN----   71 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   71 (214)
                      ||||++.     ...|..+.|.||+|||||-|++|..||...=..+..--...+....++ .+.+.+..+.. ++|    
T Consensus       253 MAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~-~LFesIQEGkY-eFPdkdW  330 (463)
T KOG0607|consen  253 MAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN-KLFESIQEGKY-EFPDKDW  330 (463)
T ss_pred             cchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHH-HHHHHHhccCC-cCChhhh
Confidence            8999875     347899999999999999999999999754332211000000000011 12222222221 222    


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           72 KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        72 ~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .....+..+++..-+..++..|-++.+++.
T Consensus       331 ahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  331 AHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            234556677777788899999999888875

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=97.91  E-value=5e-06  Score=64.18  Aligned_cols=35  Identities=29%  Similarity=0.345  Sum_probs=31.5

Q ss_pred             Ccccccc----cCCCCchhhHHHHHHHHHHHHcCCCCCC
Q 028061            1 MAPEYAL----WGYLTYKADVYSFGVVALEIVSGKNNMS   35 (214)
Q Consensus         1 mAPE~~~----~~~~t~ksDVySfGivl~Ei~tg~~p~~   35 (214)
                      ||||.+.    ...|+.|+||||+||.+.||.+++.||.
T Consensus       215 maPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~  253 (282)
T KOG0984|consen  215 MAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE  253 (282)
T ss_pred             CChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence            7999876    3479999999999999999999999986

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=97.86  E-value=2.2e-06  Score=74.05  Aligned_cols=100  Identities=19%  Similarity=0.175  Sum_probs=63.9

Q ss_pred             cccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHH-----HHHhhcCc-------------------
Q 028061            2 APEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWA-----FHLHQSGT-------------------   57 (214)
Q Consensus         2 APE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~~-------------------   57 (214)
                      |||.+.+..|....|+||.||.|||+.||+..|.......+..+..-+     -++...+.                   
T Consensus       603 aPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~  682 (752)
T KOG0670|consen  603 APEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDK  682 (752)
T ss_pred             CcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccc
Confidence            899999999999999999999999999999888654433211111000     00111111                   


Q ss_pred             --------cccccCCc--c------CCCCC---HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           58 --------LMEFVDPR--L------GSEFN---KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        58 --------~~~~~~~~--~------~~~~~---~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                              ++..+.|.  +      ....+   ......+..|+..|+..||++|-+..+.+.
T Consensus       683 vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  683 VTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             cccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence                    01111110  0      00122   334567889999999999999999998875

>KOG4171 consensus Adenylate/guanylate kinase [Nucleotide transport and metabolism]

Probab=97.86  E-value=9e-07  Score=78.31  Aligned_cols=46  Identities=13%  Similarity=0.104  Sum_probs=40.6

Q ss_pred             CCCCCCCCccccccCCccCCCCCCccchhccChhHHHHHHHhhccc
Q 028061          136 NSSGLEGSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDSH  181 (214)
Q Consensus       136 ~~~~~~~~~~s~~~~~~~~~~~ss~~~~~~~~~~~y~~~d~~~d~~  181 (214)
                      ..+...++.|+|++||+.+++..+|++||++||++|++||.++|.|
T Consensus       438 ~~f~~vTilFsdIv~Ft~ic~~ctp~~vV~~LN~lyt~fD~~i~~~  483 (671)
T KOG4171|consen  438 KEFDDVTILFSDIVGFTAICSQCTPMQVVNMLNELYTRFDRIIDTH  483 (671)
T ss_pred             cccCceEEEEeccchHHhHhhccCcHHHHHHHHHHHHHHHHhhccc
Confidence            3334445799999999999999999999999999999999999965

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=97.82  E-value=5.9e-06  Score=70.28  Aligned_cols=87  Identities=18%  Similarity=0.282  Sum_probs=56.3

Q ss_pred             CcccccccC----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCC--HHH
Q 028061            1 MAPEYALWG----YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFN--KVE   74 (214)
Q Consensus         1 mAPE~~~~~----~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~   74 (214)
                      ++||++.-+    +.+.|.||||.||+++..+.|+.||.......         ...+...   ++..... .+|  +..
T Consensus       647 LPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ---------dILqeNT---IlkAtEV-qFP~KPvV  713 (775)
T KOG1151|consen  647 LPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ---------DILQENT---ILKATEV-QFPPKPVV  713 (775)
T ss_pred             cCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH---------HHHhhhc---hhcceec-cCCCCCcc
Confidence            478887644    68899999999999999999999996422211         1111111   1111110 111  123


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHH
Q 028061           75 AERMIKIALLCTNASPSLRPTMSEVV  100 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~~RPs~~~v~  100 (214)
                      ..+...++.+|++..-++|....++.
T Consensus       714 sseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  714 SSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             CHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            34678899999999999998877664

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=97.79  E-value=2.7e-05  Score=69.37  Aligned_cols=40  Identities=25%  Similarity=0.294  Sum_probs=34.5

Q ss_pred             Ccccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCC
Q 028061            1 MAPEYAL-WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDS   40 (214)
Q Consensus         1 mAPE~~~-~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~   40 (214)
                      ++||++. .+.|+...|.|||||+++|.+||..||-.....
T Consensus       190 LhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p  230 (732)
T KOG4250|consen  190 LHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP  230 (732)
T ss_pred             cChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence            4788887 489999999999999999999999999654444

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.77  E-value=1.3e-05  Score=70.25  Aligned_cols=84  Identities=15%  Similarity=0.080  Sum_probs=59.4

Q ss_pred             cccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            2 APEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         2 APE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      |||++.+..| .+..|+||+|++|+-++.|..||+.....+.               -.+++..+++  .+.....++.+
T Consensus       222 aPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L---------------r~rvl~gk~r--Ip~~ms~dce~  284 (596)
T KOG0586|consen  222 APELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL---------------RPRVLRGKYR--IPFYMSCDCED  284 (596)
T ss_pred             ChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc---------------cchheeeeec--ccceeechhHH
Confidence            7999887655 6789999999999999999999974322110               0111222221  22223447888


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+.+-.+|.+|+++.++++.
T Consensus       285 lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  285 LLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             HHHHhhccCccccCCHHHhhhh
Confidence            9999999999999999999754

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=97.72  E-value=1.7e-05  Score=68.47  Aligned_cols=78  Identities=18%  Similarity=0.173  Sum_probs=49.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      |+||-+.+..|+.|+|||++|++|+|++. -...+..                  .+.+ .-++.+..++........-+
T Consensus       429 msPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er------------------~~t~-~d~r~g~ip~~~~~d~p~e~  489 (516)
T KOG1033|consen  429 MSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER------------------IATL-TDIRDGIIPPEFLQDYPEEY  489 (516)
T ss_pred             CCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH------------------HHhh-hhhhcCCCChHHhhcCcHHH
Confidence            78999999999999999999999999987 3322211                  0001 11111111110111112356


Q ss_pred             HHHHHhhccCCCCCCCHH
Q 028061           80 KIALLCTNASPSLRPTMS   97 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~   97 (214)
                      .|+++.+...|.+||++.
T Consensus       490 ~ll~~lls~~p~~RP~~~  507 (516)
T KOG1033|consen  490 TLLQQLLSPSPEERPSAI  507 (516)
T ss_pred             HHHHHhcCCCcccCchHH
Confidence            788999999999999443

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=97.67  E-value=3.7e-05  Score=62.81  Aligned_cols=101  Identities=15%  Similarity=0.062  Sum_probs=59.8

Q ss_pred             cccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCc----------------hhHHHHHHhhc------Cccc
Q 028061            2 APEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC----------------PLDWAFHLHQS------GTLM   59 (214)
Q Consensus         2 APE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~----------------~~~~~~~~~~~------~~~~   59 (214)
                      |||++.+..+.+++||||.||++.||+.|+--|.....-+...                +...+.....+      -...
T Consensus       185 apevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~  264 (369)
T KOG0665|consen  185 APEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFS  264 (369)
T ss_pred             CchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchh
Confidence            8999988789999999999999999999987775322111000                00000000000      0011


Q ss_pred             cccCCccC---CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           60 EFVDPRLG---SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        60 ~~~~~~~~---~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      +.+.....   .+.+.-.......++.+++-.+|++|-+..+++..
T Consensus       265 ~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  265 ELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             hhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence            11111110   01111122346778999999999999999999864

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=97.66  E-value=5.4e-05  Score=63.95  Aligned_cols=82  Identities=18%  Similarity=0.217  Sum_probs=55.6

Q ss_pred             cccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            2 APEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         2 APE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      .||.+.+..| .+..|.||+||+||-++.|..||+.....      ..+.+. ..|...+       ++    .+.....
T Consensus       220 SPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk------~lvrQI-s~GaYrE-------P~----~PSdA~g  281 (668)
T KOG0611|consen  220 SPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK------RLVRQI-SRGAYRE-------PE----TPSDASG  281 (668)
T ss_pred             CccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH------HHHHHh-hcccccC-------CC----CCchHHH
Confidence            5888887766 46899999999999999999999743211      111111 1121111       11    2225666


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+++..+|++|.++.+|..
T Consensus       282 LIRwmLmVNP~RRATieDiAs  302 (668)
T KOG0611|consen  282 LIRWMLMVNPERRATIEDIAS  302 (668)
T ss_pred             HHHHHHhcCcccchhHHHHhh
Confidence            788888899999999999864

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=97.64  E-value=7.4e-05  Score=61.08  Aligned_cols=35  Identities=26%  Similarity=0.280  Sum_probs=30.7

Q ss_pred             ccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            2 APEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         2 APE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      |||.+.+ ..||.+.|||+.||++.|+++-++-|..
T Consensus       207 APELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g  242 (438)
T KOG0666|consen  207 APELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG  242 (438)
T ss_pred             ChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence            8998886 4799999999999999999998877754

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.62  E-value=8e-05  Score=65.73  Aligned_cols=82  Identities=11%  Similarity=0.056  Sum_probs=43.9

Q ss_pred             hhhHHHHHHHHHHHHcCCC-CCCCCCCCCCCchhH--HHHHHhhcCccccccCCccCCCCCHHHHHHHHHHHHHhhccCC
Q 028061           14 KADVYSFGVVALEIVSGKN-NMSYVPDSNCTCPLD--WAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASP   90 (214)
Q Consensus        14 ksDVySfGivl~Ei~tg~~-p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p   90 (214)
                      +.||||+||+++||+++.. |+........ .+..  .....|.     ........-...........+++.+++..++
T Consensus       412 ~~DvwSlGvil~em~~~~l~p~~~~~~f~~-~~~~~~~~~~~~r-----~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~  485 (507)
T PLN03224        412 LFDSYTAGVLLMQMCVPELRPVANIRLFNT-ELRQYDNDLNRWR-----MYKGQKYDFSLLDRNKEAGWDLACKLITKRD  485 (507)
T ss_pred             ccchhhHHHHHHHHHhCCCCCccchhhhhh-HHhhccchHHHHH-----hhcccCCCcccccccChHHHHHHHHHhccCC
Confidence            5799999999999999764 5532111000 0000  0000000     0000000001111234468889999998765


Q ss_pred             ---CCCCCHHHHHH
Q 028061           91 ---SLRPTMSEVVS  101 (214)
Q Consensus        91 ---~~RPs~~~v~~  101 (214)
                         .+|+++.+++.
T Consensus       486 ~~~~~RlSa~eaL~  499 (507)
T PLN03224        486 QANRGRLSVGQALS  499 (507)
T ss_pred             CCcccCCCHHHHhC
Confidence               68999999975

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.61  E-value=9.6e-05  Score=65.63  Aligned_cols=41  Identities=24%  Similarity=0.276  Sum_probs=36.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSN   41 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~   41 (214)
                      ||||++....++..+|.||.||||+||+.|+.||-...+.+
T Consensus       838 iapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~  878 (1034)
T KOG0608|consen  838 IAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGE  878 (1034)
T ss_pred             cChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCc
Confidence            69999999999999999999999999999999997655443

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.59  E-value=7.3e-05  Score=59.49  Aligned_cols=101  Identities=12%  Similarity=0.083  Sum_probs=59.5

Q ss_pred             cccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC--------ccccccC-CccCC-CC
Q 028061            2 APEYAL-WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG--------TLMEFVD-PRLGS-EF   70 (214)
Q Consensus         2 APE~~~-~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~-~~   70 (214)
                      +||.+. ...|+.+.|||.-||++.||++|.+-+..........++...+......        .+.+.+. +.+.. ..
T Consensus       196 ppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~  275 (376)
T KOG0669|consen  196 PPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQK  275 (376)
T ss_pred             CHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchh
Confidence            578766 4689999999999999999999988776443332222222211111110        0111110 00000 00


Q ss_pred             --CHH------HHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           71 --NKV------EAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        71 --~~~------~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                        -.+      .....++|+...+..||.+|++..+++..
T Consensus       276 rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  276 RKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             hhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence              000      01257789999999999999999998754

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.42  E-value=5.5e-05  Score=68.12  Aligned_cols=93  Identities=14%  Similarity=0.109  Sum_probs=60.6

Q ss_pred             CcccccccCCCCc-hhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTY-KADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~-ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....|.. ..||||.||++..|++|+-||......+..+        .........-...-........+.+..
T Consensus       491 ~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~lp~~~~  562 (601)
T KOG0590|consen  491 LAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF--------KTNNYSDQRNIFEGPNRLLSLLPRETR  562 (601)
T ss_pred             cCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch--------hhhccccccccccChHHHHHhchhhHH
Confidence            6899999888865 5899999999999999999986433332211        000000000000000011123445788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .++.+.++.+|.+|.++.+|++
T Consensus       563 ~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  563 IIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             HHHHHHccCChhheecHHHHhh
Confidence            8999999999999999999985

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=97.34  E-value=0.00014  Score=68.13  Aligned_cols=85  Identities=14%  Similarity=0.176  Sum_probs=54.3

Q ss_pred             Ccccccc----c-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCC--HH
Q 028061            1 MAPEYAL----W-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFN--KV   73 (214)
Q Consensus         1 mAPE~~~----~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~   73 (214)
                      ++||+++    + +.|....|.||+||++|||+.|..||....      +++-         ..++.+-.-.-.+|  ..
T Consensus       243 ISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads------lveT---------Y~KIm~hk~~l~FP~~~~  307 (1317)
T KOG0612|consen  243 ISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS------LVET---------YGKIMNHKESLSFPDETD  307 (1317)
T ss_pred             cCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH------HHHH---------HHHHhchhhhcCCCcccc
Confidence            4788887    3 689999999999999999999999996321      1111         11222221111222  22


Q ss_pred             HHHHHHHHHHHhhccCCCCCCC---HHHHHH
Q 028061           74 EAERMIKIALLCTNASPSLRPT---MSEVVS  101 (214)
Q Consensus        74 ~~~~~~~l~~~C~~~~p~~RPs---~~~v~~  101 (214)
                      .+....+|+.+-+. +|+.|..   +.++..
T Consensus       308 VSeeakdLI~~ll~-~~e~RLgrngiedik~  337 (1317)
T KOG0612|consen  308 VSEEAKDLIEALLC-DREVRLGRNGIEDIKN  337 (1317)
T ss_pred             cCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence            44567777766554 6788877   777764

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.33  E-value=0.00011  Score=59.21  Aligned_cols=101  Identities=14%  Similarity=0.097  Sum_probs=58.9

Q ss_pred             ccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHH--------HHHhhcCccccccCCccCC----
Q 028061            2 APEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWA--------FHLHQSGTLMEFVDPRLGS----   68 (214)
Q Consensus         2 APE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~----   68 (214)
                      |||.+++ ..|+.+.||||.||++.|++.++--|....+.....++...        ....-.|.-..+++.....    
T Consensus       225 APEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~  304 (449)
T KOG0664|consen  225 APELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQ  304 (449)
T ss_pred             cHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCcc
Confidence            7999886 47999999999999999999988888655443322211110        0111111112223222211    


Q ss_pred             -----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           69 -----EFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        69 -----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                           ..+.....+...+..+.+..+|++|.+-.+.+..
T Consensus       305 vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~  343 (449)
T KOG0664|consen  305 RLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH  343 (449)
T ss_pred             ceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence                 1111222344556666788889999888776644

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=97.29  E-value=0.00051  Score=64.55  Aligned_cols=87  Identities=23%  Similarity=0.284  Sum_probs=55.4

Q ss_pred             Cccccccc-----------CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCc--cccccCCcc
Q 028061            1 MAPEYALW-----------GYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGT--LMEFVDPRL   66 (214)
Q Consensus         1 mAPE~~~~-----------~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~   66 (214)
                      +|||.+..           ..++++=||||.||++.||++ |+++|...         +.. . ++.+.  ..+.+-..+
T Consensus       194 iAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS---------QL~-a-Yr~~~~~~~e~~Le~I  262 (1431)
T KOG1240|consen  194 IAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS---------QLL-A-YRSGNADDPEQLLEKI  262 (1431)
T ss_pred             cChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH---------HHH-h-HhccCccCHHHHHHhC
Confidence            58887653           137888999999999999988 78777421         100 0 01110  000000000


Q ss_pred             CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           67 GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        67 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                             ....+.++++.+++.+|.+|-++.+.++.-.+
T Consensus       263 -------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG  294 (1431)
T KOG1240|consen  263 -------EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG  294 (1431)
T ss_pred             -------cCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence                   01157889999999999999999999876443

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=97.19  E-value=0.0015  Score=51.54  Aligned_cols=98  Identities=15%  Similarity=0.177  Sum_probs=57.5

Q ss_pred             ccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh--------------cCccccccCCccC
Q 028061            3 PEYAL-WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ--------------SGTLMEFVDPRLG   67 (214)
Q Consensus         3 PE~~~-~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~   67 (214)
                      ||.+- ...|.-.-|+|||||+|.+|+.++.||..-.. ....++..+.-+..              ...+..++....+
T Consensus       201 PELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~d-N~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~r  279 (338)
T KOG0668|consen  201 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD-NYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSR  279 (338)
T ss_pred             chheeechhccccHHHHHHHHHHHHHHhccCcccCCCC-CHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcccc
Confidence            66655 45678889999999999999999999853222 11222222211100              0011111111111


Q ss_pred             CCCC--------HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 SEFN--------KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ~~~~--------~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+.        .-...+..+++.+.+..|-.+|+|+.+.+.
T Consensus       280 k~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  280 KPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             ccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence            1110        011246788889999999999999998874

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.15  E-value=0.0011  Score=56.10  Aligned_cols=86  Identities=22%  Similarity=0.123  Sum_probs=55.3

Q ss_pred             Cccccccc--C----CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHH
Q 028061            1 MAPEYALW--G----YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVE   74 (214)
Q Consensus         1 mAPE~~~~--~----~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (214)
                      ||||+...  |    .--.|+|.|+.|.+.|||+....||.......   +.        .....+-    ..+..+..+
T Consensus       418 mAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~---L~--------~r~Yqe~----qLPalp~~v  482 (598)
T KOG4158|consen  418 MAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML---LD--------TRTYQES----QLPALPSRV  482 (598)
T ss_pred             cchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe---ec--------hhhhhhh----hCCCCcccC
Confidence            79998763  2    12368999999999999999999986422211   00        0001111    112333444


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           75 AERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +..+.+++..-++.+|.+|++..-...
T Consensus       483 pp~~rqlV~~lL~r~pskRvsp~iAAN  509 (598)
T KOG4158|consen  483 PPVARQLVFDLLKRDPSKRVSPNIAAN  509 (598)
T ss_pred             ChHHHHHHHHHhcCCccccCCccHHHh
Confidence            557888899999999999988654433

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.07  E-value=0.00028  Score=62.90  Aligned_cols=88  Identities=22%  Similarity=0.266  Sum_probs=57.5

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      ||||+..   .+.|.+++|||+.||...|+-.-++|.....+..       +..++......   .+.+  +-.......
T Consensus       179 mapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr-------~l~LmTkS~~q---pp~l--kDk~kws~~  246 (829)
T KOG0576|consen  179 MAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR-------ALFLMTKSGFQ---PPTL--KDKTKWSEF  246 (829)
T ss_pred             cchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH-------HHHHhhccCCC---CCcc--cCCccchHH
Confidence            7999875   6789999999999999999988777753222111       11111111110   1111  112223447


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVV  100 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~  100 (214)
                      +.++++.|+-.+|++||+...++
T Consensus       247 fh~fvK~altknpKkRptaeklL  269 (829)
T KOG0576|consen  247 FHNFVKGALTKNPKKRPTAEKLL  269 (829)
T ss_pred             HHHHHHHHhcCCCccCCChhhhe
Confidence            89999999999999999987664

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.02  E-value=0.0006  Score=55.79  Aligned_cols=63  Identities=13%  Similarity=0.078  Sum_probs=42.1

Q ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHHHHHHhhccC
Q 028061           10 YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNAS   89 (214)
Q Consensus        10 ~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~   89 (214)
                      .++.+.|.|++|++++.|.++..||........                    .......+. ..++.+..|+...++.+
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~--------------------~~~~f~~C~-~~Pe~v~~LI~~lL~~~  284 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWCGRLPFGLSSPEAD--------------------PEWDFSRCR-DMPEPVQFLIRGLLQRN  284 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHHSS-STCCCGGGST--------------------SGGGGTTSS----HHHHHHHHHHT-SS
T ss_pred             eeeeccCHHHHHHHHHHHHHccCCCCCCCcccc--------------------ccccchhcC-CcCHHHHHHHHHHccCC
Confidence            688999999999999999999999964322211                    000112344 56778999999999999


Q ss_pred             CCCC
Q 028061           90 PSLR   93 (214)
Q Consensus        90 p~~R   93 (214)
                      |.+|
T Consensus       285 ~~~R  288 (288)
T PF14531_consen  285 PEDR  288 (288)
T ss_dssp             GGGS
T ss_pred             cccC
Confidence            9887

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=96.90  E-value=0.00049  Score=58.02  Aligned_cols=35  Identities=29%  Similarity=0.358  Sum_probs=30.4

Q ss_pred             cccccc-cCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            2 APEYAL-WGYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         2 APE~~~-~~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      |||++. ...-+.++||||-||+++-+++++.||..
T Consensus       245 aPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~  280 (418)
T KOG1167|consen  245 APEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFK  280 (418)
T ss_pred             chHHHhhccCcCCccceeeccceeehhhcccccccc
Confidence            789876 45778899999999999999999999854

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=96.61  E-value=0.001  Score=53.62  Aligned_cols=86  Identities=10%  Similarity=0.095  Sum_probs=51.9

Q ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHHHHHHhhccC
Q 028061           10 YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNAS   89 (214)
Q Consensus        10 ~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~   89 (214)
                      ...+.+|||.|||+++-+++|+.|+......+.   .-|-|..|..+... .+. +....    ......++-.+-+..+
T Consensus       201 ~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~---~Y~~~~~w~~rk~~-~~P-~~F~~----fs~~a~r~Fkk~lt~~  271 (378)
T KOG1345|consen  201 VVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDK---PYWEWEQWLKRKNP-ALP-KKFNP----FSEKALRLFKKSLTPR  271 (378)
T ss_pred             EecccccchheeeeeeeeecCCCcchhhhccCc---hHHHHHHHhcccCc-cCc-hhhcc----cCHHHHHHHHHhcCCc
Confidence            456789999999999999999999973322222   22333334333222 111 11112    2235666777788888


Q ss_pred             CCCCCCHHHHHHHHh
Q 028061           90 PSLRPTMSEVVSMLE  104 (214)
Q Consensus        90 p~~RPs~~~v~~~L~  104 (214)
                      +++|=...++.++-+
T Consensus       272 ~~drcki~~~kk~rk  286 (378)
T KOG1345|consen  272 FKDRCKIWTAKKMRK  286 (378)
T ss_pred             ccccchhHHHHHHHH
Confidence            888866666655443

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=96.20  E-value=0.0027  Score=56.31  Aligned_cols=33  Identities=36%  Similarity=0.470  Sum_probs=29.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS   35 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~   35 (214)
                      ||||+++  ......|.||||++++|+++|..||.
T Consensus       160 mApEI~~--gh~~a~D~ws~gvl~felltg~~pf~  192 (612)
T KOG0603|consen  160 RAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFG  192 (612)
T ss_pred             hhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCc
Confidence            7899887  56678999999999999999999985

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.09  E-value=0.0027  Score=59.54  Aligned_cols=79  Identities=14%  Similarity=0.113  Sum_probs=52.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCc-cCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPR-LGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   79 (214)
                      +|||++....|....|.|++||+++|.+-|+.||....+++.   ..            .++... ..++-....+.+..
T Consensus       225 iaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel---fg------------~visd~i~wpE~dea~p~Ea~  289 (1205)
T KOG0606|consen  225 IAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL---FG------------QVISDDIEWPEEDEALPPEAQ  289 (1205)
T ss_pred             cChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH---Hh------------hhhhhhccccccCcCCCHHHH
Confidence            478988888899999999999999999999999975433321   11            111000 01111122233677


Q ss_pred             HHHHHhhccCCCCCC
Q 028061           80 KIALLCTNASPSLRP   94 (214)
Q Consensus        80 ~l~~~C~~~~p~~RP   94 (214)
                      .++.+.++.+|..|-
T Consensus       290 dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  290 DLIEQLLRQNPLCRL  304 (1205)
T ss_pred             HHHHHHHHhChHhhc
Confidence            788888888998884

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=95.83  E-value=0.062  Score=42.89  Aligned_cols=98  Identities=17%  Similarity=0.194  Sum_probs=58.3

Q ss_pred             Cccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALW---GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~---~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||.+..   ..+....|+|++|+++++++.|..|+......   ............... ..................
T Consensus       175 ~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  250 (384)
T COG0515         175 MAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPT-PSLASPLSPSNPELISKA  250 (384)
T ss_pred             CCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCC-cccccccCccccchhhHH
Confidence            57888876   58889999999999999999999986433221   000111111000000 000000100101122346


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      +..++..|+..+|..|.+.......
T Consensus       251 ~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         251 ASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHHHhcCchhcCCHHHHhhc
Confidence            8889999999999999998876653

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=95.58  E-value=0.00095  Score=58.37  Aligned_cols=84  Identities=18%  Similarity=0.101  Sum_probs=57.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCC-HHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFN-KVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   79 (214)
                      +|||+++...|+..-|+||.||++|--++|.-||.....     +.+    ..++..++       .++.| .+......
T Consensus       733 LaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd-----Ind----QIQNAaFM-------yPp~PW~eis~~Ai  796 (888)
T KOG4236|consen  733 LAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED-----IND----QIQNAAFM-------YPPNPWSEISPEAI  796 (888)
T ss_pred             cCHHHHhhccccccccceeeeEEEEEEecccccCCCccc-----hhH----Hhhccccc-------cCCCchhhcCHHHH
Confidence            689999999999999999999999999999999963211     111    11111111       12222 33455677


Q ss_pred             HHHHHhhccCCCCCCCHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVV  100 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~  100 (214)
                      +|+...++..-.+|-+..+-+
T Consensus       797 dlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  797 DLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             HHHHHHHHHHHHHhcchHhhc
Confidence            888888888888888776654

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=94.07  E-value=0.094  Score=40.09  Aligned_cols=33  Identities=15%  Similarity=0.300  Sum_probs=24.9

Q ss_pred             ccccccc-CCCCchhhHHHHHHHHHHHHcCCCCC
Q 028061            2 APEYALW-GYLTYKADVYSFGVVALEIVSGKNNM   34 (214)
Q Consensus         2 APE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~   34 (214)
                      +|.++.+ .-|+...|+||-||++.|+....+|.
T Consensus       169 ppdvlfgakly~tsidmwsagcifaelanagrpl  202 (292)
T KOG0662|consen  169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL  202 (292)
T ss_pred             CcceeeeeehhccchHhhhcchHHHHHhhcCCCC
Confidence            3555554 35788999999999999999744443

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=93.82  E-value=0.029  Score=46.69  Aligned_cols=80  Identities=19%  Similarity=0.228  Sum_probs=45.2

Q ss_pred             cccccccCCCCchhhHHHHHHHHHHHHcCCCC-CCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            2 APEYALWGYLTYKADVYSFGVVALEIVSGKNN-MSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         2 APE~~~~~~~t~ksDVySfGivl~Ei~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      |||+-...+.+..+|||+||+..+|+.-+.-- ........    .+...    ...+. .+..+           .-..
T Consensus       250 a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~----~ee~i----a~~i~-~len~-----------lqr~  309 (458)
T KOG1266|consen  250 APESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVE----VEENI----ANVII-GLENG-----------LQRG  309 (458)
T ss_pred             cCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceee----hhhhh----hhhee-eccCc-----------cccC
Confidence            45555555677899999999999998765432 11000000    00000    00000 01111           1234


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++..|++..|..||+|+.++.
T Consensus       310 ~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  310 SITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             cCcccccCCCCCCcchhhhhc
Confidence            677899999999999998764

>KOG3618 consensus Adenylyl cyclase [General function prediction only]

Probab=93.31  E-value=0.031  Score=51.00  Aligned_cols=43  Identities=7%  Similarity=0.025  Sum_probs=36.8

Q ss_pred             CCCCCCCCccccccCCccCCCCCCccchhccChhHHHHHHHhh
Q 028061          136 NSSGLEGSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMR  178 (214)
Q Consensus       136 ~~~~~~~~~~s~~~~~~~~~~~ss~~~~~~~~~~~y~~~d~~~  178 (214)
                      +......+.|.||+|||.+++.-+-.++|.++||+|-+||..-
T Consensus       336 ~~menVSILFADIvGFTkMSsnKsA~~LV~lLNDLFgRFD~LC  378 (1318)
T KOG3618|consen  336 QQMENVSILFADIVGFTKMSSNKSAHALVGLLNDLFGRFDRLC  378 (1318)
T ss_pred             hhhhhhhhhhhhhhchhhccccccHHHHHHHHHHHHHHHHHHH
Confidence            3334445799999999999999999999999999999998753

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=91.89  E-value=0.13  Score=48.84  Aligned_cols=82  Identities=17%  Similarity=0.154  Sum_probs=56.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccC-CCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLG-SEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   79 (214)
                      +|||...+......+|.|++|++++|.++|..||....+...               +..++..... +..+......+.
T Consensus      1002 laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~---------------f~ni~~~~~~~p~g~~~~s~~aq 1066 (1205)
T KOG0606|consen 1002 LAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQI---------------FENILNRDIPWPEGPEEGSYEAQ 1066 (1205)
T ss_pred             cCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhh---------------hhccccCCCCCCCCccccChhhh
Confidence            478988888888999999999999999999999975433221               1122222111 122333444677


Q ss_pred             HHHHHhhccCCCCCCCHH
Q 028061           80 KIALLCTNASPSLRPTMS   97 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~   97 (214)
                      .+..+-+..++.+|-.+.
T Consensus      1067 ~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1067 DLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhhhhhccCchhccCcc
Confidence            777778888999997665

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=91.63  E-value=0.054  Score=48.97  Aligned_cols=88  Identities=24%  Similarity=0.263  Sum_probs=53.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      .|||++.....+.++|+||+|++++-|.. |+.-+.........   ..      .....+.-....    ....+.++.
T Consensus       176 ~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~---~~------~~~~~~~~~~~~----s~~~p~el~  242 (700)
T KOG2137|consen  176 LAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY---SF------SRNLLNAGAFGY----SNNLPSELR  242 (700)
T ss_pred             ccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchh---hh------hhcccccccccc----cccCcHHHH
Confidence            48999999899999999999999998885 44433321111100   00      000011111111    122344777


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +-+.+.+..+...||++..+..
T Consensus       243 ~~l~k~l~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  243 ESLKKLLNGDSAVRPTLDLLLS  264 (700)
T ss_pred             HHHHHHhcCCcccCcchhhhhc
Confidence            7888889999999998777653

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=88.93  E-value=0.35  Score=36.07  Aligned_cols=27  Identities=15%  Similarity=0.294  Sum_probs=24.3

Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ..+.+++.+|++.+|++||++.++++.
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence            578899999999999999999998864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG3619 consensus Adenylate/guanylate cyclase [Energy production and conversion]

Probab=88.92  E-value=0.14  Score=47.93  Aligned_cols=46  Identities=11%  Similarity=0.106  Sum_probs=40.3

Q ss_pred             CCCCCCccccccCCccCCCCCCccchhccChhHHHHHHHhhccchh
Q 028061          138 SGLEGSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDSHIH  183 (214)
Q Consensus       138 ~~~~~~~~s~~~~~~~~~~~ss~~~~~~~~~~~y~~~d~~~d~~~~  183 (214)
                      .....+.|.|++|||.+++.-|..+.|.++|++|.+||.+-..++-
T Consensus       110 h~nVSIl~adivgft~l~s~~saqelv~~LneLf~rfd~lA~~~~c  155 (867)
T KOG3619|consen  110 HDNVSILFADIVGFTQLASQCSAQELVKVLNELFARFDRLAAENHC  155 (867)
T ss_pred             ccchHhhHHHHhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHhcce
Confidence            3344579999999999999999999999999999999998877743

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=87.02  E-value=0.082  Score=46.80  Aligned_cols=76  Identities=21%  Similarity=0.256  Sum_probs=41.0

Q ss_pred             chhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccC-----CCCCHHHHHHHHHHHHHhhc
Q 028061           13 YKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLG-----SEFNKVEAERMIKIALLCTN   87 (214)
Q Consensus        13 ~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~C~~   87 (214)
                      +|+|||+.|.++.|+..|..-+.....      .+....+..-    ...+....     .....++...+..+...|.-
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~------s~~l~~i~k~----~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~  179 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTE------SEYLEILLKY----YTDDQELLSTAMEHLIQLLADKKRLPLLKKCLW  179 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHH------HHHHHHHHHh----ccCchhHHHHHHHHHHHHhhhHhHHHHhccCCc
Confidence            699999999999999887643321100      0000000000    00000000     01123455577888889998


Q ss_pred             cCCCCCCCHHH
Q 028061           88 ASPSLRPTMSE   98 (214)
Q Consensus        88 ~~p~~RPs~~~   98 (214)
                      ..|..||.+.+
T Consensus       180 ~~~~ir~l~~~  190 (725)
T KOG1093|consen  180 LEPIIRPLPME  190 (725)
T ss_pred             cccccccchhH
Confidence            88888876443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=81.05  E-value=0.4  Score=43.56  Aligned_cols=87  Identities=16%  Similarity=0.168  Sum_probs=54.1

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCc-c-CCCCCHHHHHH
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPR-L-GSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~   77 (214)
                      +|||...+ .......|+||.|+++.-+++|..|+.........              ........ . ...........
T Consensus       196 ~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~  261 (601)
T KOG0590|consen  196 GAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR--------------YSSWKSNKGRFTQLPWNSISDQ  261 (601)
T ss_pred             CCcccccchhhcCCCcccccccccccccccCCCCcccccccccc--------------ceeecccccccccCccccCChh
Confidence            57887766 45567899999999999999999987643322211              01111110 0 00011112235


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ...+..+++..+|..|.+.+++..
T Consensus       262 ~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  262 AHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             hhhcccccccCCchhccccccccc
Confidence            677778888889999999887753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	214
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-16
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-16
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		4e-10
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		4e-10
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		4e-04
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		4e-04
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		4e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKN--NMSYVPDSNCTCPLDWAFHLHQSGTL 58
           +APEY   G  + K DV+ +GV+ LE+++G+   +++ + + +    LDW   L +   L
Sbjct: 210 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 269
Query: 59  MEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 107
              VD  L   +   E E++I++ALLCT +SP  RP MSEVV MLEG  
Sbjct: 270 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 318

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKN--NMSYVPDSNCTCPLDWAFHLHQSGTL 58
           +APEY   G  + K DV+ +GV+ LE+++G+   +++ + + +    LDW   L +   L
Sbjct: 202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261
Query: 59  MEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS 107
              VD  L   +   E E++I++ALLCT +SP  RP MSEVV MLEG  
Sbjct: 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 3   PEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFV 62
           PEY + G LT K+DVYSFGVV  E++  ++ +            +WA   H +G L + V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 63  DPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           DP L  +       +    A+ C   S   RP+M +V+  LE
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 3   PEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFV 62
           PEY + G LT K+DVYSFGVV  E++  ++ +            +WA   H +G L + V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 63  DPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           DP L  +       +    A+ C   S   RP+M +V+  LE
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSG 30
           MAPE AL G +T K+D+YSFGVV LEI++G
Sbjct: 202 MAPE-ALRGEITPKSDIYSFGVVLLEIITG 230

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSG 30
           MAPE AL G +T K+D+YSFGVV LEI++G
Sbjct: 202 MAPE-ALRGEITPKSDIYSFGVVLLEIITG 230

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSG 30
           MAPE AL G +T K+D+YSFGVV LEI++G
Sbjct: 196 MAPE-ALRGEITPKSDIYSFGVVLLEIITG 224

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	214
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-53
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-44
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-40
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-18
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-11
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-10
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	6e-10
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-09
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-09
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-08
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-08
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	8e-08
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-07
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-07
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-07
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-07
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	5e-07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-07
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-07
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-06
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-06
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-06
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-06
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	5e-06
4aoj_A	329	High affinity nerve growth factor receptor; transf	9e-06
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-05
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	6e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	6e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	7e-05
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	7e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	8e-05
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	9e-05
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-04
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-04
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-04
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	7e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	7e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	8e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  172 bits (438), Expect = 3e-53
 Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 2/107 (1%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNN--MSYVPDSNCTCPLDWAFHLHQSGTL 58
           +APEY   G  + K DV+ +GV+ LE+++G+    ++ + + +    LDW   L +   L
Sbjct: 202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261

Query: 59  MEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 105
              VD  L   +   E E++I++ALLCT +SP  RP MSEVV MLEG
Sbjct: 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  150 bits (381), Expect = 1e-44
 Identities = 34/113 (30%), Positives = 55/113 (48%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           + PEY + G LT K+DVYSFGVV  E++  ++ +            +WA   H +G L +
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVI 113
            VDP L  +       +    A+ C   S   RP+M +V+  LE +  + + +
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESV 320

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  139 bits (353), Expect = 1e-40
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 7/107 (6%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV-PDSNCTCPLDWAFHLHQS-GTL 58
           MAPE  L G +T K+D+YSFGVV LEI++G   +            LD    +     T+
Sbjct: 202 MAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL---LDIKEEIEDEEKTI 257

Query: 59  MEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 105
            +++D ++  + +    E M  +A  C +   + RP + +V  +L+ 
Sbjct: 258 EDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 80.5 bits (199), Expect = 3e-18
 Identities = 21/116 (18%), Positives = 34/116 (29%), Gaps = 13/116 (11%)

Query: 1   MAPEYA-----LWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS 55
           MAPE              + D+Y+ G+V  E+ S         D     P +     H S
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML-PFEEEIGQHPS 258

Query: 56  GTLM------EFVDPRLGSEFNKVEAER-MIKIALLCTNASPSLRPTMSEVVSMLE 104
              M      +   P L   + K      + +    C +     R +   V   + 
Sbjct: 259 LEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 59.7 bits (145), Expect = 6e-11
 Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 14/104 (13%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE         K DV+SFG+V  EI+          D +   P    F L+  G    
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRV-----NADPDYL-PRTMDFGLNVRG---- 238

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           F+D                 I + C +  P  RP+  ++   LE
Sbjct: 239 FLDRYCPPNCP----PSFFPITVRCCDLDPEKRPSFVKLEHWLE 278

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 58.3 bits (141), Expect = 2e-10
 Identities = 16/120 (13%), Positives = 33/120 (27%), Gaps = 16/120 (13%)

Query: 1   MAPEYA-------LWGYLTYKADVYSFGVVALEIVSGKNNM-SYVPDSNCTCPLDWAFHL 52
           MAPE                + D+Y+ G++  EI     ++                   
Sbjct: 195 MAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGN 254

Query: 53  HQSGTLMEFV------DPRLGSEF--NKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           H +   M+ +       P+    +  N +    + +    C +     R T       + 
Sbjct: 255 HPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 56.5 bits (137), Expect = 6e-10
 Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 14/107 (13%)

Query: 1   MAPE---YALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT 57
           MAPE          ++++DVY+FG+V  E+++G+     +P SN     D    +   G+
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ-----LPYSNIN-NRDQIIEMVGRGS 242

Query: 58  LMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           L     P L    +      M ++   C       RP+   +++ +E
Sbjct: 243 LS----PDLSKVRSNCPKR-MKRLMAECLKKKRDERPSFPRILAEIE 284

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 53.6 bits (129), Expect = 7e-09
 Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 1   MAPEYALWGYLTY-------KADVYSFGVVALEIVSGKNNMSYVPD----SNCTCPLDWA 49
           M PE  L   L          AD+YSFG++  E+     +   V +     +   P D +
Sbjct: 213 MPPE-VLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPS 271

Query: 50  FHLHQSGTLMEFVDPRLGSEFNKVEA-ERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           +   +    ++ + P   + ++  E   +M K+   C   +P+ R T   V   L 
Sbjct: 272 YEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 51.8 bits (125), Expect = 3e-08
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 26/111 (23%)

Query: 1   MAPEYALWG--YLTY--KADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG 56
           +APE AL      T    AD++SF V+  E+V+ +     VP ++ +  ++    +   G
Sbjct: 175 VAPE-ALQKKPEDTNRRSADMWSFAVLLWELVTRE-----VPFADLS-NMEIGMKVALEG 227

Query: 57  ---TLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              T+   + P +          +++KI   C N  P+ RP    +V +LE
Sbjct: 228 LRPTIPPGISPHV---------SKLMKI---CMNEDPAKRPKFDMIVPILE 266

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 21/107 (19%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE       +  +DV+S+GV+  E+++G+     VP       L  A+ +  +   + 
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGE-----VPFRGID-GLAVAYGVAMNKLALP 234

Query: 61  F---VDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
                                 K+   C N  P  RP+ + ++  L 
Sbjct: 235 IPSTCPEPFA------------KLMEDCWNPDPHSRPSFTNILDQLT 269

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 50.8 bits (122), Expect = 5e-08
 Identities = 27/123 (21%), Positives = 38/123 (30%), Gaps = 49/123 (39%)

Query: 1   MAPEYALWGYLTY--KADVYSFGVVALEIVSGK---NNMSYV--------------PDSN 41
           MAPE       +Y  KAD YSF ++   I++G+   +  SY               P   
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP 252

Query: 42  CTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS 101
             CP            ++E                       LC +  P  RP  S +V 
Sbjct: 253 EDCPPRLR-------NVIE-----------------------LCWSGDPKKRPHFSYIVK 282

Query: 102 MLE 104
            L 
Sbjct: 283 ELS 285

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 50.4 bits (121), Expect = 8e-08
 Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 22/108 (20%)

Query: 1   MAPE-YALWGYLTYKADVYSFGVVALEIVSGK---NNMSYVPDSNCTCPLDWAFHLHQSG 56
           MAPE +    Y + K DV+S+G++  E+++ +   + +           + WA H     
Sbjct: 170 MAPEVFEGSNY-SEKCDVFSWGIILWEVITRRKPFDEIGGPAFR-----IMWAVHNGTRP 223

Query: 57  TLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
            L++ +   +         E ++     C +  PS RP+M E+V ++ 
Sbjct: 224 PLIKNLPKPI---------ESLMT---RCWSKDPSQRPSMEEIVKIMT 259

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 49.7 bits (119), Expect = 1e-07
 Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 13/116 (11%)

Query: 1   MAPE------YALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPD-----SNCTCPLDWA 49
           MAPE               + D+++FG+V  E+     +   V D      +   P D +
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV-PNDPS 242

Query: 50  FHLHQSGTLMEFVDPRLGSEFNKVEA-ERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           F   +    ++   P + + +        + K+   C   +PS R T   +   L 
Sbjct: 243 FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 35/122 (28%)

Query: 1   MAPE------YALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ 54
           MAPE               K+DVYSFGV+  E+ + +      P  N   P      +  
Sbjct: 206 MAPEVLRDEPS------NEKSDVYSFGVILWELATLQ-----QPWGNLN-PAQVVAAVGF 253

Query: 55  SGTLMEF---VDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG--SSNI 109
               +E    ++P++           +I+    C    P  RP+ + ++ +L     S +
Sbjct: 254 KCKRLEIPRNLNPQV---------AAIIE---GCWTNEPWKRPSFATIMDLLRPLIKSAV 301

Query: 110 PD 111
           P 
Sbjct: 302 PP 303

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 21/113 (18%), Positives = 37/113 (32%), Gaps = 24/113 (21%)

Query: 1   MAPEYALWGYL---------TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFH 51
           +APE                +  +DV++ G +  E+ + +      P      P +    
Sbjct: 201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE-----WPFKTQ--PAEAIIW 253

Query: 52  LHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              +G         +G E           I L C       RPT ++++ MLE
Sbjct: 254 QMGTGMKPNLSQIGMGKEI--------SDILLFCWAFEQEERPTFTKLMDMLE 298

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 48.1 bits (115), Expect = 5e-07
 Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 17/105 (16%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLM 59
           MAPE       T+++DV+SFGV+  EI + G     Y        P++  F L + G  M
Sbjct: 272 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG--SPY-----PGIPVEELFKLLKEGHRM 324

Query: 60  EFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           +   P   +         +  +   C +A PS RPT  ++V  L+
Sbjct: 325 D--KPANCT-------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 360

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 47.7 bits (114), Expect = 6e-07
 Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 15/98 (15%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE     Y     DVY+FG+  LE+ + +      P S C       +    SG    
Sbjct: 197 MAPEMYEEKY-DESVDVYAFGMCMLEMATSE-----YPYSECQNAAQI-YRRVTSGVKPA 249

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSE 98
                    F+KV    + +I   C   +   R ++ +
Sbjct: 250 --------SFDKVAIPEVKEIIEGCIRQNKDERYSIKD 279

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 48.0 bits (114), Expect = 7e-07
 Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 14/104 (13%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE       T ++DV+SFGV+  EI S    +   P        ++     + GT M 
Sbjct: 262 MAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEF-CRRLKEGTRMR 316

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              P   +         M +  L C +  PS RPT SE+V  L 
Sbjct: 317 A--PDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLG 351

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 22/108 (20%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-GKN---NMSYVPDSNCTCPLDWAFHLHQSG 56
           MAPE    G  T K+DV+S+G++  EI S G N    +    +          + L Q+G
Sbjct: 241 MAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN---------FYKLIQNG 291

Query: 57  TLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
             M+   P   +       E +  I   C       RP+   + S L 
Sbjct: 292 FKMD--QPFYAT-------EEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 26/120 (21%), Positives = 42/120 (35%), Gaps = 21/120 (17%)

Query: 1   MAPEYALWGYLTY-------KADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLH 53
           MAPE  L   +         +AD+Y+ G+V  EI    +      D      L +   + 
Sbjct: 218 MAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED----YQLPYYDLVP 272

Query: 54  QSGTLMEFVD--------PRLGSEFNKVEA-ERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              ++ E           P + + +   EA   M KI   C  A+ + R T   +   L 
Sbjct: 273 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 29/128 (22%), Positives = 44/128 (34%), Gaps = 45/128 (35%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYVPDSNC-----TCP 45
           M PE  + G  T K D +SFGV+  EI S        K+N   + +V           CP
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCP 312

Query: 46  LDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 105
                 +++   +M                         C    P  RP  + ++  +E 
Sbjct: 313 GP----VYR---IM-----------------------TQCWQHQPEDRPNFAIILERIEY 342

Query: 106 SSNIPDVI 113
            +  PDVI
Sbjct: 343 CTQDPDVI 350

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 22/108 (20%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-GKN---NMSYVPDSNCTCPLDWAFHLHQSG 56
           MAPE       T+++DV+S+G+   E+ S G +    M               + + + G
Sbjct: 214 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK---------FYKMIKEG 264

Query: 57  TLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
             M    P             M  I   C +A P  RPT  ++V ++E
Sbjct: 265 FRML--SPEHAP-------AEMYDIMKTCWDADPLKRPTFKQIVQLIE 303

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 29/128 (22%), Positives = 44/128 (34%), Gaps = 45/128 (35%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYVPDSNC-----TCP 45
           M PE  + G  T K D +SFGV+  EI S        K+N   + +V           CP
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCP 271

Query: 46  LDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 105
                 +++   +M                         C    P  RP  + ++  +E 
Sbjct: 272 GP----VYR---IM-----------------------TQCWQHQPEDRPNFAIILERIEY 301

Query: 106 SSNIPDVI 113
            +  PDVI
Sbjct: 302 CTQDPDVI 309

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 45.4 bits (108), Expect = 4e-06
 Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 17/105 (16%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLM 59
           MAPE       T+++DV+SFGV+  EI + G     Y        P++  F L + G  M
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG--SPY-----PGIPVEELFKLLKEGHRM 278

Query: 60  EFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           +   P   +         +  +   C +A PS RPT  ++V  L+
Sbjct: 279 D--KPANCT-------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 314

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 45.0 bits (107), Expect = 5e-06
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 23/115 (20%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLM 59
            APE       + ++DV+SFGVV  E+ +      S  P +     +     +     L+
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCD--KSCSPSAEFLRMMGCERDVPALSRLL 254

Query: 60  EFVDPRLGSEFNKVEAERMIK----------IALLCTNASPSLRPTMSEVVSMLE 104
           E ++          E +R+            +  LC   SP  RP+ S +   L+
Sbjct: 255 ELLE----------EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 44.6 bits (106), Expect = 9e-06
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 37/123 (30%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYVPDSNC-TCPLDWA 49
           M PE  L+   T ++DV+SFGVV  EI +         +N   +  +        P    
Sbjct: 227 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACP 286

Query: 50  FHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI 109
             ++    +M                         C    P  R ++ +V + L+  +  
Sbjct: 287 PEVYA---IM-----------------------RGCWQREPQQRHSIKDVHARLQALAQA 320

Query: 110 PDV 112
           P V
Sbjct: 321 PPV 323

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 28/111 (25%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNNMSYVPDSNCTCPLDWAFHLH 53
           MAPE       T ++DV+S+G++  EI S       G    S              + L 
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF------------YKLV 280

Query: 54  QSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           + G  M    P           + +  I   C    P+ RPT  ++ S L+
Sbjct: 281 KDGYQMA--QPAFAP-------KNIYSIMQACWALEPTHRPTFQQICSFLQ 322

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 28/128 (21%), Positives = 42/128 (32%), Gaps = 46/128 (35%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYVPDSNC-----TCP 45
           +A E       T K+DV++FGV   EI +       G  N     Y+   +       C 
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCL 275

Query: 46  LDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 105
            +    L++   +M                         C    P  RPT S +   LE 
Sbjct: 276 DE----LYE---IM-----------------------YSCWRTDPLDRPTFSVLRLQLEK 305

Query: 106 -SSNIPDV 112
              ++PDV
Sbjct: 306 LLESLPDV 313

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 51/122 (41%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYV--------PDSNC 42
           MAPE  ++G  +  +D++S+GVV  E+ S       G +N   +  +        PD   
Sbjct: 197 MAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDD-- 254

Query: 43  TCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM 102
            CP      ++    LM                       + C N  PS RP   ++ S 
Sbjct: 255 -CPAW----VYA---LM-----------------------IECWNEFPSRRPRFKDIHSR 283

Query: 103 LE 104
           L 
Sbjct: 284 LR 285

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 51/122 (41%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYV--------PDSNC 42
           M PE  ++   T ++DV+SFGV+  EI +         +N   +  +        P    
Sbjct: 202 MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRV-- 259

Query: 43  TCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM 102
            CP +    ++    +M                       L C    P  R  + E+  +
Sbjct: 260 -CPKE----VYD---VM-----------------------LGCWQREPQQRLNIKEIYKI 288

Query: 103 LE 104
           L 
Sbjct: 289 LH 290

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 14/104 (13%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE       T ++DV+SFGV+  EI S    +   P        +      + GT M 
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEE-FCRRLKEGTRMR 271

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              P   +         M +  L C +  PS RPT SE+V  L 
Sbjct: 272 --APDYTT-------PEMYQTMLDCWHGEPSQRPTFSELVEHLG 306

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 45/119 (37%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYVPDSNC-----TCP 45
           M PE   +   T ++DV+++GVV  EI S       G  +   + YV D N       CP
Sbjct: 243 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCP 302

Query: 46  LDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           L+    L+    LM                        LC +  P+ RP+   +  +L+
Sbjct: 303 LE----LYN---LM-----------------------RLCWSKLPADRPSFCSIHRILQ 331

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 35/114 (30%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYVPDSNCTCPLDWAF 50
           MA E       T ++DV+SFGV+  EIV+       G       + +             
Sbjct: 219 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL------------- 265

Query: 51  HLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              ++G  ME   P   S       E M ++ L C    P  RP  +++   LE
Sbjct: 266 ---KTGHRME--RPDNCS-------EEMYRLMLQCWKQEPDKRPVFADISKDLE 307

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 17/105 (16%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLM 59
           MAPE       T+++DV+SFGV+  EI + G     Y        P++  F L + G  M
Sbjct: 260 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG--SPY-----PGVPVEELFKLLKEGHRM 312

Query: 60  EFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           +   P   +         +  +   C +A PS RPT  ++V  L+
Sbjct: 313 D--KPSNCT-------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 348

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 25/116 (21%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLD-WAFHLHQSGTL 58
            APE        Y +DV+SFGV   E+++   ++ S          +      + +   L
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR---L 260

Query: 59  MEFVDPRLGSEFNKVEAERMIK----------IALLCTNASPSLRPTMSEVVSMLE 104
            E ++            ER+ +          +   C     S RPT   ++ +L+
Sbjct: 261 TELLE----------RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 42.2 bits (100), Expect = 6e-05
 Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 35/114 (30%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYVPDSNCTCPLDWAF 50
            APE   +G  + ++DV+SFG++  E  S         +N     +V             
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV------------- 328

Query: 51  HLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              + G  +    P L         + + ++   C    P  RP+ S +   L+
Sbjct: 329 ---EKGGRLPC--PELCP-------DAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 41.9 bits (99), Expect = 6e-05
 Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 45/119 (37%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYVPDSN-----CTCP 45
           MA E       T K+DV+SFGV+  E+++         N      Y+           CP
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 258

Query: 46  LDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
                 L++   +M                       L C +    +RP+ SE+VS + 
Sbjct: 259 DP----LYE---VM-----------------------LKCWHPKAEMRPSFSELVSRIS 287

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 41.9 bits (99), Expect = 7e-05
 Identities = 24/119 (20%), Positives = 39/119 (32%), Gaps = 45/119 (37%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYVPDSNC-----TCP 45
           +A E       T  +DV++FGV   EI++       G  N    +Y+   N       C 
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECM 265

Query: 46  LDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
            +    ++    LM                         C +A P  RP+ + +   LE
Sbjct: 266 EE----VYD---LM-----------------------YQCWSADPKQRPSFTCLRMELE 294

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 41.9 bits (99), Expect = 7e-05
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 35/114 (30%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYVPDSNCTCPLDWAF 50
           M+PE    G  T  +DV+SFGVV  EI +       G +N   + +V             
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV------------- 253

Query: 51  HLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
                G L++   P           + + ++  +C   +P +RP+  E++S ++
Sbjct: 254 ---MEGGLLD--KPDNCP-------DMLFELMRMCWQYNPKMRPSFLEIISSIK 295

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 41.5 bits (98), Expect = 8e-05
 Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 51/122 (41%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYV--------PDSNC 42
            A E       T K+DV+SFGV+  E+++         +      ++        P+   
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEY-- 252

Query: 43  TCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM 102
            CP      L+Q   +M                         C  A P++RPT   +V  
Sbjct: 253 -CPDS----LYQ---VM-----------------------QQCWEADPAVRPTFRVLVGE 281

Query: 103 LE 104
           +E
Sbjct: 282 VE 283

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 41.1 bits (97), Expect = 9e-05
 Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 25/116 (21%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS--GKNNMSYVPDSNCTCPLDWAFHLHQSGTL 58
            APE  +       +DV+SFGV   E+++    ++           P      + +   L
Sbjct: 196 YAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR---L 252

Query: 59  MEFVDPRLGSEFNKVEAERMIK----------IALLCTNASPSLRPTMSEVVSMLE 104
           +  +           E +R+            +   C    PS R +   ++   E
Sbjct: 253 VNTLK----------EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 20/114 (17%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE       +  +DV+SFGVV  E+ +        P        +          L+E
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243

Query: 61  FVDPRLGSEFNKVEAERMIK----------IALLCTNASPSLRPTMSEVVSMLE 104
            +              R+ +          I   C N + + RP+  ++   ++
Sbjct: 244 LLK----------NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 27/122 (22%), Positives = 38/122 (31%), Gaps = 51/122 (41%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYV--------PDSNC 42
           MAPE   +   T  +DV+ FGV   EI+        G  N   +  +        P +  
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-- 616

Query: 43  TCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM 102
            CP      L+    LM                         C    PS RP  +E+ + 
Sbjct: 617 -CPPT----LYS---LM-----------------------TKCWAYDPSRRPRFTELKAQ 645

Query: 103 LE 104
           L 
Sbjct: 646 LS 647

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 20/114 (17%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE       +  +DV+SFGVV  E+ +        P        +          L+E
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274

Query: 61  FVDPRLGSEFNKVEAERMIK----------IALLCTNASPSLRPTMSEVVSMLE 104
            +              R+ +          I   C N + + RP+  ++   ++
Sbjct: 275 LLK----------NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 17/105 (16%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLM 59
           MA E   +   T  +DV+S+GV+  EIVS G     Y     C       +     G  +
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG--TPY-----CGMTCAELYEKLPQGYRL 260

Query: 60  EFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           E   P           + +  +   C    P  RP+ ++++  L 
Sbjct: 261 E--KPLNCD-------DEVYDLMRQCWREKPYERPSFAQILVSLN 296

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 45/119 (37%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYVPDSN-----CTCP 45
           MA E       T K+DV+SFGV+  E+++         N      Y+           CP
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 322

Query: 46  LDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
                 L++   +M                       L C +    +RP+ SE+VS + 
Sbjct: 323 DP----LYE---VM-----------------------LKCWHPKAEMRPSFSELVSRIS 351

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE AL+G  T K+DV+SFG++  E+ + K  + Y    N            + G  M 
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTT-KGRVPYPGMVNRE-----VLDQVERGYRMP 401

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              P           E +  +   C    P  RPT   + + LE
Sbjct: 402 C--PPECP-------ESLHDLMCQCWRKEPEERPTFEYLQAFLE 436

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 27/122 (22%), Positives = 38/122 (31%), Gaps = 51/122 (41%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYV--------PDSNC 42
           MAPE   +   T  +DV+ FGV   EI+        G  N   +  +        P +  
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN-- 241

Query: 43  TCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM 102
            CP      L+    LM                         C    PS RP  +E+ + 
Sbjct: 242 -CPPT----LYS---LM-----------------------TKCWAYDPSRRPRFTELKAQ 270

Query: 103 LE 104
           L 
Sbjct: 271 LS 272

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 39.9 bits (93), Expect = 3e-04
 Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE AL+G  T K+DV+SFG++  E+ + K  + Y    N            + G  M 
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTT-KGRVPYPGMVNRE-----VLDQVERGYRMP 484

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              P           E +  +   C    P  RPT   + + LE
Sbjct: 485 C--PPECP-------ESLHDLMCQCWRKEPEERPTFEYLQAFLE 519

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 58/157 (36%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYV--------PDSNC 42
            APE   +   T  +DV+SFG+V  E+++         +N   M  +        P    
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMD-- 274

Query: 43  TCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM 102
            CP      ++Q   LM                       + C     + RP  +++VS+
Sbjct: 275 -CPSA----IYQ---LM-----------------------MQCWQQERARRPKFADIVSI 303

Query: 103 LEGSSNIPDVIPEAGGLSEDLRFKTLRDHPREMNSSG 139
           L+     PD +               R   R  ++SG
Sbjct: 304 LDKLIRAPDSLKTLADFDP-------RVSIRLPSTSG 333

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 39.4 bits (92), Expect = 5e-04
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE   +   + K+DV++FGV+  EI +      Y             + L +    ME
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQ-----VYELLEKDYRME 439

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              P           E++ ++   C   +PS RP+ +E+    E
Sbjct: 440 R--PEGCP-------EKVYELMRACWQWNPSDRPSFAEIHQAFE 474

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 38.7 bits (91), Expect = 6e-04
 Identities = 33/122 (27%), Positives = 45/122 (36%), Gaps = 51/122 (41%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYV--------PDSNC 42
            APE   +G  T K+DV+SFG++  EIV+       G  N   +  +        PD   
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--- 233

Query: 43  TCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM 102
            CP +    L+Q   LM                        LC    P  RPT   + S+
Sbjct: 234 NCPEE----LYQ---LM-----------------------RLCWKERPEDRPTFDYLRSV 263

Query: 103 LE 104
           LE
Sbjct: 264 LE 265

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 38.7 bits (91), Expect = 7e-04
 Identities = 27/122 (22%), Positives = 38/122 (31%), Gaps = 51/122 (41%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYV--------PDSNC 42
           M+PE   +   T  +DV+ F V   EI+S          N   +  +        PD   
Sbjct: 181 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL-- 238

Query: 43  TCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM 102
            CP      L+    LM                         C +  PS RP  +E+V  
Sbjct: 239 -CPPV----LYT---LM-----------------------TRCWDYDPSDRPRFTELVCS 267

Query: 103 LE 104
           L 
Sbjct: 268 LS 269

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 32/138 (23%), Positives = 49/138 (35%), Gaps = 51/138 (36%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYV--------PDSNC 42
            APE   +   +  +DV+SFGVV  E+++          N   +S V        P    
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMG-- 278

Query: 43  TCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM 102
            CP      LHQ   LM                       L C +   + RP  S++VS+
Sbjct: 279 -CPHA----LHQ---LM-----------------------LDCWHKDRAQRPRFSQIVSV 307

Query: 103 LEGSSNIPDVIPEAGGLS 120
           L+     P+ +     +S
Sbjct: 308 LDALIRSPESLRATATVS 325

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 26/122 (21%), Positives = 42/122 (34%), Gaps = 51/122 (41%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVS-------GKNN---MSYV--------PDSNC 42
            +PE   +   T  +DV+S+G+V  E++S         +N   +  V        P    
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD-- 274

Query: 43  TCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM 102
            CP      L+Q   LM                       L C     + RP   ++VS+
Sbjct: 275 -CPAA----LYQ---LM-----------------------LDCWQKDRNNRPKFEQIVSI 303

Query: 103 LE 104
           L+
Sbjct: 304 LD 305

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	214
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.81
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.77
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.76
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.75
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.73
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.69
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.69
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.62
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.6
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.57
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.55
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.54
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.53
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.53
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.53
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.52
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.52
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.51
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.51
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.5
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.5
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.5
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.5
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.5
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.49
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.48
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.48
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.48
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.48
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.48
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.48
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.47
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.47
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.47
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.47
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.47
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.47
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.46
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.46
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.46
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.46
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.46
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.46
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.46
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.45
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.45
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.45
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.45
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.45
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.45
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.45
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.45
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.45
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.45
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.44
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.44
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.44
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.44
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.44
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.44
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.44
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.43
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.43
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.43
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.43
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.42
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.42
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.42
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.42
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.41
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.41
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.41
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.41
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.41
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.41
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.41
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.41
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.41
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.41
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.4
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.4
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.4
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.4
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.39
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.39
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.39
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.39
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.39
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.39
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.38
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.38
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.38
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.38
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.38
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.36
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.36
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.36
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.36
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.35
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.34
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.34
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.34
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.34
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.33
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.33
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.33
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.33
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.33
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.32
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.32
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.32
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.31
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.31
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.3
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.3
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.3
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.3
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.29
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.29
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.29
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.29
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.29
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.28
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.28
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.28
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.28
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.28
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.28
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.28
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.28
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.28
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.28
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.28
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.27
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.27
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.27
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.27
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.27
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.27
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.26
3niz_A	311	Rhodanese family protein; structural genomics, str	99.26
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.26
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.26
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.26
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.26
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.26
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.25
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.25
3bhy_A	283	Death-associated protein kinase 3; death associate	99.25
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.25
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.25
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.25
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.25
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.25
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.25
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.25
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.25
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.25
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.24
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.24
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.24
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.24
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.24
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.24
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.23
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.23
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.23
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.23
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.23
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.23
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.23
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.23
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.23
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.23
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.23
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.22
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.22
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.22
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.22
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.22
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.21
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.21
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.21
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.21
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.21
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.2
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.2
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.2
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.2
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.2
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.2
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.19
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.19
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.19
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.19
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.19
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.18
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.18
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.18
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.18
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.18
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.18
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.17
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.17
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.16
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.16
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.16
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.16
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.16
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.16
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.16
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.15
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.15
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.15
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.15
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.15
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.14
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.14
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.14
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.14
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.14
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.14
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.14
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.14
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.13
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.13
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.13
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.13
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.13
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.12
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.12
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.12
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.11
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.1
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.1
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.09
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.09
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.08
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.06
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.06
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.05
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.03
3uqc_A	286	Probable conserved transmembrane protein; structur	99.03
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.02
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.01
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.97
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.84
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	97.75
1y10_A	407	Hypothetical protein RV1264/MT1302; adenylyl cycla	92.47
1yk9_A	204	Adenylate cyclase; beta-alpha-beta sandwich, struc	91.1
1ab8_A	220	Adenylyl cyclase; lyase, complex (transferase-inhi	90.42
3et6_A	190	Soluble guanylyl cyclase beta; guanylate cyclase,	89.63
3uvj_A	225	Guanylate cyclase soluble subunit alpha-3; nitric	87.18
1azs_A	220	VC1; complex (lyase/hydrolase), hydrolase, signal	86.47
2wz1_A	219	Guanylate cyclase soluble subunit beta-1; lyase, G	83.91
3r5g_A	198	CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas	83.19
2w01_A	208	Adenylate cyclase; guanylyl cyclase, class III nuc	83.04
1fx2_A	235	Receptor-type adenylate cyclase gresag 4.1; CAMP,	81.39
1wc3_A	219	Adenylate cyclase; soluble adenylyl cyclase, CAMP	81.12

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.81  E-value=4.1e-21  Score=157.57  Aligned_cols=93  Identities=27%  Similarity=0.412  Sum_probs=71.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.++.|+.|+|||||||+||||++ |+.||.....      .+..          ..+..+...+.|..++..+.
T Consensus       214 mAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~------~~~~----------~~i~~~~~~~~p~~~~~~~~  277 (308)
T 4gt4_A          214 MAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------QDVV----------EMIRNRQVLPCPDDCPAWVY  277 (308)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH------HHHH----------HHHHTTCCCCCCTTCCHHHH
T ss_pred             cCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH------HHHH----------HHHHcCCCCCCcccchHHHH
Confidence            89999999999999999999999999998 8899863221      1111          11111222234445667899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      +|+.+||+.||++||+|.+|++.|+...++
T Consensus       278 ~li~~C~~~dP~~RPs~~ei~~~L~a~~nl  307 (308)
T 4gt4_A          278 ALMIECWNEFPSRRPRFKDIHSRLRAWGNL  307 (308)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTSCC-
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHhccCC
Confidence            999999999999999999999999987654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.77  E-value=4.1e-20  Score=152.91  Aligned_cols=93  Identities=25%  Similarity=0.324  Sum_probs=70.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+..++.++|||||||++|||++ |+.||.....      .+..... ..         +...+.|..++..+.
T Consensus       227 mAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~------~~~~~~i-~~---------g~~~~~p~~~~~~~~  290 (329)
T 4aoj_A          227 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN------TEAIDCI-TQ---------GRELERPRACPPEVY  290 (329)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH------HHHHHHH-HH---------TCCCCCCTTCCHHHH
T ss_pred             cChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH------HHHHHHH-Hc---------CCCCCCcccccHHHH
Confidence            89999999999999999999999999999 8999863221      1111111 11         111223344556899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      +|+.+||+.||++||+|.+|+..|+.+.+.
T Consensus       291 ~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          291 AIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             HHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            999999999999999999999999876544

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.76  E-value=7.5e-20  Score=149.47  Aligned_cols=90  Identities=22%  Similarity=0.369  Sum_probs=68.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.++.|+.|+|||||||++|||+| |+.||.....      .+..... ..+         ...+.|..++..+.
T Consensus       197 mAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~------~~~~~~i-~~~---------~~~~~p~~~~~~~~  260 (299)
T 4asz_A          197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN------NEVIECI-TQG---------RVLQRPRTCPQEVY  260 (299)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHH-HHT---------CCCCCCTTCCHHHH
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHH-HcC---------CCCCCCccchHHHH
Confidence            79999999999999999999999999998 8999964221      1111111 111         11223444556899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +|+.+||+.||++||+|.+|+..|+..
T Consensus       261 ~li~~cl~~dP~~RPs~~~i~~~L~~~  287 (299)
T 4asz_A          261 ELMLGCWQREPHMRKNIKGIHTLLQNL  287 (299)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.75  E-value=1.1e-19  Score=151.63  Aligned_cols=91  Identities=31%  Similarity=0.349  Sum_probs=68.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.++.|+.++|||||||++|||++ |+.||......      ......         +..+.+...|..++.++.
T Consensus       254 mAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~------~~~~~~---------i~~g~~~~~p~~~~~~~~  318 (353)
T 4ase_A          254 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCRR---------LKEGTRMRAPDYTTPEMY  318 (353)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS------HHHHHH---------HHHTCCCCCCTTCCHHHH
T ss_pred             cCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH------HHHHHH---------HHcCCCCCCCccCCHHHH
Confidence            89999999999999999999999999998 89999643221      111111         111122233344556899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.||++||+|.+|++.|+..
T Consensus       319 ~li~~c~~~dP~~RPt~~eil~~L~~l  345 (353)
T 4ase_A          319 QTMLDCWHGEPSQRPTFSELVEHLGNL  345 (353)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            999999999999999999999998764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.73  E-value=2.1e-18  Score=141.23  Aligned_cols=96  Identities=26%  Similarity=0.438  Sum_probs=67.8

Q ss_pred             Cccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALW---GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~---~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      ||||++..   +.|+.|+|||||||+||||++|+.||......      .........+.    ..+.+ ...+..++..
T Consensus       201 mAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------~~~~~~~~~~~----~~p~~-~~~~~~~~~~  269 (307)
T 3omv_A          201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGY----ASPDL-SKLYKNCPKA  269 (307)
T ss_dssp             CCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHTTC----CCCCS-TTSCTTSCHH
T ss_pred             cCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCC----CCCCc-ccccccchHH
Confidence            89999863   46999999999999999999999999632211      11111111111    11111 1223345568


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +.+|+.+||+.+|++||+|.+|+..|+.+.
T Consensus       270 l~~li~~cl~~dP~~RPs~~ei~~~Le~l~  299 (307)
T 3omv_A          270 MKRLVADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             HHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            999999999999999999999999887643

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.69  E-value=4.4e-17  Score=133.55  Aligned_cols=109  Identities=31%  Similarity=0.511  Sum_probs=93.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++..+.++.++||||||++++|+++|+.||.............|.......+.+...+++......+...+..+.+
T Consensus       208 ~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  287 (321)
T 2qkw_B          208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGD  287 (321)
T ss_dssp             CCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHH
T ss_pred             cCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHH
Confidence            68999998999999999999999999999999997666655666667766666666677777777777778888999999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      ++.+||+.+|++||++.+|++.|+.....
T Consensus       288 li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          288 TAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence            99999999999999999999999876544

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.69  E-value=2.2e-18  Score=141.00  Aligned_cols=103  Identities=21%  Similarity=0.137  Sum_probs=68.0

Q ss_pred             CcccccccC------CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCc--------hhHHHHHHhhcCccccccCCcc
Q 028061            1 MAPEYALWG------YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC--------PLDWAFHLHQSGTLMEFVDPRL   66 (214)
Q Consensus         1 mAPE~~~~~------~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~   66 (214)
                      ||||++.+.      .++.|+|||||||++|||++|+.|+.........+        .........    ....+++.+
T Consensus       179 mAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~rp~~  254 (303)
T 3hmm_A          179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV----CEQKLRPNI  254 (303)
T ss_dssp             CCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH----TTSCCCCCC
T ss_pred             cCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHH----hcccCCCCC
Confidence            799998753      57889999999999999999988764322211100        011111111    111222222


Q ss_pred             CCC-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           67 GSE-FNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        67 ~~~-~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      ... ...+++..+.+|+.+||+.||++||||.+|++.|+.+.
T Consensus       255 p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~  296 (303)
T 3hmm_A          255 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            211 12346678999999999999999999999999998654

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.62  E-value=7.1e-16  Score=126.43  Aligned_cols=108  Identities=39%  Similarity=0.657  Sum_probs=87.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCC--CCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV--PDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      +|||++..+.++.++||||||++++|+++|+.||...  .........+|.........+....+.......+......+
T Consensus       202 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  281 (326)
T 3uim_A          202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQL  281 (326)
T ss_dssp             CCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHH
T ss_pred             cCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHH
Confidence            6899998889999999999999999999999998532  12223345555555555555666777777777788888999


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .+++.+||+.+|.+||++.+|++.|++..-
T Consensus       282 ~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          282 IQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             HHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             HHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence            999999999999999999999999997543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.60  E-value=2.3e-16  Score=130.54  Aligned_cols=92  Identities=16%  Similarity=0.094  Sum_probs=67.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..|+.++|||||||++|||++|+.||.......   +..   ......       +. ....+..++..+.+
T Consensus       223 mAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~~~---~i~~~~-------~~-~~~~~~~~s~~~~~  288 (336)
T 4g3f_A          223 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP---LCL---KIASEP-------PP-IREIPPSCAPLTAQ  288 (336)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC---CHH---HHHHSC-------CG-GGGSCTTSCHHHHH
T ss_pred             cCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---HHH---HHHcCC-------CC-chhcCccCCHHHHH
Confidence            79999999999999999999999999999999996433221   111   111100       00 01122334457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++.+||+.||.+||++.+|++.|...
T Consensus       289 li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          289 AIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            99999999999999999999887653

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.57  E-value=4.1e-16  Score=126.74  Aligned_cols=86  Identities=24%  Similarity=0.402  Sum_probs=59.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++. +.|+.++|||||||++|||++|+.||.....     ... .......+.     .+   ...+...+..+.+
T Consensus       197 mAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~-----~~~-~~~~i~~~~-----~~---~~~~~~~~~~~~~  261 (290)
T 3fpq_A          197 MAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQ-IYRRVTSGV-----KP---ASFDKVAIPEVKE  261 (290)
T ss_dssp             CCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHH-HHHHHTTTC-----CC---GGGGGCCCHHHHH
T ss_pred             cCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-----HHH-HHHHHHcCC-----CC---CCCCccCCHHHHH
Confidence            8999886 5699999999999999999999999953211     111 111111111     00   0111112336889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.||++||++.++++
T Consensus       262 li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          262 IIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999975

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.55  E-value=6.2e-16  Score=128.59  Aligned_cols=85  Identities=15%  Similarity=0.248  Sum_probs=62.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..|+.++||||+||++|||++|+.||....      ..+...... .+..         +..+...+..+.+
T Consensus       192 mAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~-~~~~---------~~~~~~~s~~~~~  255 (350)
T 4b9d_A          192 LSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS------MKNLVLKII-SGSF---------PPVSLHYSYDLRS  255 (350)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHH-HTCC---------CCCCTTSCHHHHH
T ss_pred             cCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHH-cCCC---------CCCCccCCHHHHH
Confidence            79999999999999999999999999999999996321      111111111 1111         1112223457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.||++||++.++++
T Consensus       256 li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          256 LVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999985

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.54  E-value=2.5e-15  Score=129.03  Aligned_cols=90  Identities=23%  Similarity=0.286  Sum_probs=68.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||.+..+.++.++|||||||++|||++ |+.||.......   ...             .+..+.....+..++..+.
T Consensus       353 ~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~-------------~i~~~~~~~~p~~~~~~l~  416 (450)
T 1k9a_A          353 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP-------------RVEKGYKMDAPDGCPPAVY  416 (450)
T ss_dssp             SCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHH-------------HHHTTCCCCCCTTCCHHHH
T ss_pred             eCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH-------------HHHcCCCCCCCCcCCHHHH
Confidence            69999999999999999999999999998 999986433221   111             1111111223334556899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|.+||++.+|+..|+.+
T Consensus       417 ~li~~cl~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          417 DVMKNCWHLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.53  E-value=9.8e-16  Score=128.58  Aligned_cols=90  Identities=21%  Similarity=0.352  Sum_probs=66.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+..+.++.++|||||||++||+++ |..||......       .....         +......+.+..++..+.
T Consensus       282 ~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-------~~~~~---------~~~~~~~~~~~~~~~~l~  345 (377)
T 3cbl_A          282 TAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------QTREF---------VEKGGRLPCPELCPDAVF  345 (377)
T ss_dssp             SCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-------HHHHH---------HHTTCCCCCCTTCCHHHH
T ss_pred             CCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHH---------HHcCCCCCCCCCCCHHHH
Confidence            69999998999999999999999999998 88888532211       11111         111111222333455789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.+|++.|+.+
T Consensus       346 ~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          346 RLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.53  E-value=2.6e-15  Score=123.45  Aligned_cols=91  Identities=21%  Similarity=0.306  Sum_probs=67.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++.+..++.++|||||||+++|+++ |+.||.......                +...+........+..+...+.
T Consensus       186 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~  249 (327)
T 3poz_A          186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----------------ISSILEKGERLPQPPICTIDVY  249 (327)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----------------HHHHHHTTCCCCCCTTBCHHHH
T ss_pred             cChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH----------------HHHHHHcCCCCCCCccCCHHHH
Confidence            68999999999999999999999999999 999986432211                1111111111122233445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      .++.+||+.+|.+||++.+|+..|+...
T Consensus       250 ~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          250 MIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             HHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            9999999999999999999999998754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.53  E-value=2.1e-15  Score=129.65  Aligned_cols=92  Identities=27%  Similarity=0.394  Sum_probs=68.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||++|||++ |+.||.....      .+..... .         .....+.+..++..+.
T Consensus       352 ~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~------~~~~~~i-~---------~~~~~~~~~~~~~~l~  415 (454)
T 1qcf_A          352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN------PEVIRAL-E---------RGYRMPRPENCPEELY  415 (454)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHH-H---------HTCCCCCCTTSCHHHH
T ss_pred             cCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH------HHHHHHH-H---------cCCCCCCCCCCCHHHH
Confidence            69999998999999999999999999999 9999853211      1111111 1         1111122333455899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      +++.+||+.+|++||+|.+|+..|+....
T Consensus       416 ~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          416 NIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             HHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999998654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.52  E-value=4.9e-15  Score=127.26  Aligned_cols=93  Identities=26%  Similarity=0.367  Sum_probs=69.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||++|||++ |+.||.....      .+.. ..         +......+.+..++..+.
T Consensus       348 ~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~------~~~~-~~---------i~~~~~~~~~~~~~~~l~  411 (452)
T 1fmk_A          348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVL-DQ---------VERGYRMPCPPECPESLH  411 (452)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHH-HH---------HHTTCCCCCCTTSCHHHH
T ss_pred             cCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH------HHHH-HH---------HHcCCCCCCCCCCCHHHH
Confidence            69999999999999999999999999999 8988853211      1111 11         111111222334556899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      +++.+||+.+|++||++.+|+..|+.....
T Consensus       412 ~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          412 DLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            999999999999999999999999986543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.52  E-value=4.1e-15  Score=124.58  Aligned_cols=91  Identities=27%  Similarity=0.356  Sum_probs=67.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+..++.++|||||||++|||++ |+.||.......   +.    ..         +........+..++..+.
T Consensus       272 ~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~---~~----~~---------~~~~~~~~~~~~~~~~l~  335 (370)
T 2psq_A          272 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LF----KL---------LKEGHRMDKPANCTNELY  335 (370)
T ss_dssp             CCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HH----HH---------HHTTCCCCCCTTSCHHHH
T ss_pred             ECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----HH---------HhcCCCCCCCCCCCHHHH
Confidence            69999999999999999999999999999 899985422111   11    11         111111122333455799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||+.+|.+||++.+|++.|+.+.
T Consensus       336 ~li~~~l~~dP~~Rpt~~ell~~L~~il  363 (370)
T 2psq_A          336 MMMRDCWHAVPSQRPTFKQLVEDLDRIL  363 (370)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999999998753

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.51  E-value=4.6e-15  Score=128.87  Aligned_cols=92  Identities=25%  Similarity=0.367  Sum_probs=69.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||++|||++ |..||......   .             +.+.+........+..++..+.
T Consensus       386 ~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---~-------------~~~~~~~~~~~~~~~~~~~~l~  449 (495)
T 1opk_A          386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---Q-------------VYELLEKDYRMERPEGCPEKVY  449 (495)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---G-------------HHHHHHTTCCCCCCTTCCHHHH
T ss_pred             eCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---H-------------HHHHHHcCCCCCCCCCCCHHHH
Confidence            69999999999999999999999999999 88888532211   1             1111111222223334456899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      +|+.+||+.+|++||+|.+|++.|+....
T Consensus       450 ~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          450 ELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             HHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999997643

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.51  E-value=5.4e-14  Score=113.35  Aligned_cols=97  Identities=12%  Similarity=0.041  Sum_probs=68.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+.+..++.++|||||||+++|+++|+.||....................... ..    .+...    .+..+..
T Consensus       182 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~----~~~~l~~  252 (296)
T 3uzp_A          182 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-IE----VLCKG----YPSEFAT  252 (296)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-HH----HHTTT----SCHHHHH
T ss_pred             CChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-hH----HHHhh----CCHHHHH
Confidence            689999988999999999999999999999999975443332222221111100000 00    00111    2347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++.+||+.+|.+||++.+|++.|+..
T Consensus       253 li~~~l~~dp~~Rps~~~l~~~l~~~  278 (296)
T 3uzp_A          253 YLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence            99999999999999999999999864

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.50  E-value=3.1e-15  Score=124.24  Aligned_cols=87  Identities=22%  Similarity=0.256  Sum_probs=62.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....|+.++||||+||+++||++|+.||.....      .+.....      .....+.+  ..+......+.+
T Consensus       237 mAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~~~i------~~~~~~~~--~~~~~~s~~~~d  302 (346)
T 4fih_A          237 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAMKMI------RDNLPPRL--KNLHKVSPSLKG  302 (346)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHH------HHSSCCCC--SCGGGSCHHHHH
T ss_pred             CCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHH------HcCCCCCC--CccccCCHHHHH
Confidence            799999999999999999999999999999999953211      1111111      11111111  112233457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.||++||++.++++
T Consensus       303 li~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          303 FLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999976

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.50  E-value=5.9e-15  Score=131.37  Aligned_cols=90  Identities=18%  Similarity=0.241  Sum_probs=68.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||++|||++ |+.||......+   ..    ..         +........+..++..+.
T Consensus       506 ~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~----~~---------i~~~~~~~~p~~~~~~l~  569 (613)
T 2ozo_A          506 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VM----AF---------IEQGKRMECPPECPPELY  569 (613)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH---HH----HH---------HHTTCCCCCCTTCCHHHH
T ss_pred             eCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HH----HH---------HHcCCCCCCCCcCCHHHH
Confidence            69999999999999999999999999998 999986432211   11    11         111111223334556899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||+|.+|++.|+..
T Consensus       570 ~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          570 ALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             HHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            999999999999999999999998863

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.50  E-value=3.5e-15  Score=122.00  Aligned_cols=94  Identities=21%  Similarity=0.218  Sum_probs=67.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||++++|+++|+.||.....      ...........     ..    ...+...+..+.+
T Consensus       206 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~------~~~~~~~~~~~-----~~----~~~~~~~~~~l~~  270 (309)
T 3p86_A          206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP------AQVVAAVGFKC-----KR----LEIPRNLNPQVAA  270 (309)
T ss_dssp             SCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH------HHHHHHHHHSC-----CC----CCCCTTSCHHHHH
T ss_pred             cChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcC-----CC----CCCCccCCHHHHH
Confidence            689999999999999999999999999999999853221      11111110000     01    1122233447899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      ++.+||+.+|.+||++.+|++.|+.....
T Consensus       271 li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          271 IIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            99999999999999999999999876543

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.50  E-value=6e-14  Score=112.99  Aligned_cols=97  Identities=12%  Similarity=0.049  Sum_probs=68.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+.+..++.++|||||||+++|+++|+.||........................ ..    ....    .+..+..
T Consensus       182 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~----~~~~l~~  252 (296)
T 4hgt_A          182 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-EV----LCKG----YPSEFAT  252 (296)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-HH----HTTT----SCHHHHH
T ss_pred             cchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh-hh----hhcc----CCHHHHH
Confidence            6899999889999999999999999999999999754443332222211111000000 00    0011    1347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++.+||+.+|++||++.+|++.|+..
T Consensus       253 li~~~l~~~p~~Rpt~~~l~~~l~~~  278 (296)
T 4hgt_A          253 YLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999998864

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.50  E-value=5.6e-15  Score=117.80  Aligned_cols=90  Identities=24%  Similarity=0.400  Sum_probs=66.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+.+..++.++||||||++++|+++|+.||.....      .......         .........+..++..+.+
T Consensus       181 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~---------~~~~~~~~~~~~~~~~~~~  245 (271)
T 3dtc_A          181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG------LAVAYGV---------AMNKLALPIPSTCPEPFAK  245 (271)
T ss_dssp             SCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH------HHHHHHH---------HTSCCCCCCCTTCCHHHHH
T ss_pred             eCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHhh---------hcCCCCCCCCcccCHHHHH
Confidence            589999988999999999999999999999999853211      1111111         1111111222334457999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      ++.+||+.+|.+||++.++++.|+.
T Consensus       246 li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          246 LMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHhcCCcccCcCHHHHHHHHhc
Confidence            9999999999999999999999975

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.49  E-value=4.7e-14  Score=113.81  Aligned_cols=98  Identities=15%  Similarity=0.078  Sum_probs=67.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||++++|+++|+.||..........................     ....    .+..+.+
T Consensus       185 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~l~~  255 (298)
T 1csn_A          185 MSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE-----LCAG----FPEEFYK  255 (298)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH-----HTTT----SCHHHHH
T ss_pred             CCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHH-----HHhh----CcHHHHH
Confidence            689999988999999999999999999999999965433221111111111100000000     0111    2347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      ++.+||+.+|++||++.+|++.|+...
T Consensus       256 li~~~l~~dp~~RP~~~~l~~~l~~~~  282 (298)
T 1csn_A          256 YMHYARNLAFDATPDYDYLQGLFSKVL  282 (298)
T ss_dssp             HHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence            999999999999999999999988653

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.48  E-value=5.2e-15  Score=117.68  Aligned_cols=92  Identities=22%  Similarity=0.332  Sum_probs=64.4

Q ss_pred             CcccccccCCCC---chhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALWGYLT---YKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~~~~t---~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||.+....++   .++||||||++++|+++|+.||.....      ........         ........+...+..
T Consensus       175 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~---------~~~~~~~~~~~~~~~  239 (271)
T 3kmu_A          175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------MEIGMKVA---------LEGLRPTIPPGISPH  239 (271)
T ss_dssp             SCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------HHHHHHHH---------HSCCCCCCCTTCCHH
T ss_pred             cChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------HHHHHHHH---------hcCCCCCCCCCCCHH
Confidence            689998865444   489999999999999999999853211      11111111         111111222233457


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +..++.+||+.+|++||++.++++.|+...
T Consensus       240 ~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          240 VSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            899999999999999999999999998653

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.48  E-value=9.9e-15  Score=119.75  Aligned_cols=106  Identities=16%  Similarity=0.034  Sum_probs=67.5

Q ss_pred             Cccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHH-----HhhcCccccccCCccCCC-
Q 028061            1 MAPEYALW-----GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFH-----LHQSGTLMEFVDPRLGSE-   69 (214)
Q Consensus         1 mAPE~~~~-----~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-   69 (214)
                      +|||++.+     ..++.++|||||||++|||++|+.||..........+......     ............+.+... 
T Consensus       200 ~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (322)
T 3soc_A          200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYW  279 (322)
T ss_dssp             CCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGG
T ss_pred             cCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccc
Confidence            68999875     3667789999999999999999999865433222211111000     000000001111111111 


Q ss_pred             CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           70 FNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        70 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ....+...+.+++.+||+.||++||++.+|++.|+.+
T Consensus       280 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l  316 (322)
T 3soc_A          280 QKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM  316 (322)
T ss_dssp             GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            1224566799999999999999999999999999864

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.48  E-value=5.2e-15  Score=124.15  Aligned_cols=91  Identities=23%  Similarity=0.321  Sum_probs=66.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++|||||||++||+++ |+.||.....      .... .         .+........+..++..+.
T Consensus       217 ~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~------~~~~-~---------~i~~~~~~~~~~~~~~~l~  280 (373)
T 2qol_A          217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN------QDVI-K---------AVDEGYRLPPPMDCPAALY  280 (373)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH------HHHH-H---------HHHTTEECCCCTTCBHHHH
T ss_pred             cChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH------HHHH-H---------HHHcCCCCCCCccccHHHH
Confidence            68999999999999999999999999998 9999853211      1111 1         1111111122223445799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||+.+|.+||++.+|++.|+...
T Consensus       281 ~li~~cl~~dp~~RPs~~~i~~~L~~~~  308 (373)
T 2qol_A          281 QLMLDCWQKDRNNRPKFEQIVSILDKLI  308 (373)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999999998753

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.48  E-value=1e-13  Score=112.52  Aligned_cols=103  Identities=29%  Similarity=0.499  Sum_probs=74.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh-cCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ-SGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+. +.++.++||||||++++|+++|+.||.......  .+..+...... ...+...+++.+ ...+...+..+.
T Consensus       202 ~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~  277 (307)
T 2nru_A          202 MAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ--LLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMY  277 (307)
T ss_dssp             CCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS--BTTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHH
T ss_pred             CChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcchH--HHHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHH
Confidence            6899775 468999999999999999999999997543322  12222222111 122334444444 345667788899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      .++.+||+.+|.+||++.+|++.|+.+.
T Consensus       278 ~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          278 SVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            9999999999999999999999998653

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.48  E-value=1.2e-14  Score=116.89  Aligned_cols=92  Identities=25%  Similarity=0.350  Sum_probs=65.3

Q ss_pred             Ccccccc--cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYAL--WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~--~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      +|||++.  ...++.++||||||++++|+++|+.||.......    .........         .......+..++..+
T Consensus       193 ~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~---------~~~~~~~~~~~~~~l  259 (287)
T 4f0f_A          193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIRE---------EGLRPTIPEDCPPRL  259 (287)
T ss_dssp             SCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH----HHHHHHHHH---------SCCCCCCCTTSCHHH
T ss_pred             cCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH----HHHHHHHhc---------cCCCCCCCcccCHHH
Confidence            6899984  5568899999999999999999999996432221    111111111         111112223344579


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      .+++.+||+.+|.+||++.+|++.|+.
T Consensus       260 ~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          260 RNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            999999999999999999999999975

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.48  E-value=1.2e-14  Score=127.46  Aligned_cols=93  Identities=26%  Similarity=0.367  Sum_probs=69.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||++|||++ |+.||.....      .+.. ..         +........+..++..+.
T Consensus       431 ~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~------~~~~-~~---------i~~~~~~~~~~~~~~~l~  494 (535)
T 2h8h_A          431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVL-DQ---------VERGYRMPCPPECPESLH  494 (535)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH------HHHH-HH---------HHTTCCCCCCTTCCHHHH
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHH-HH---------HHcCCCCCCCCCCCHHHH
Confidence            68999999999999999999999999999 8888853211      1111 11         111111222334455899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      +|+.+||+.+|++||+|.+|+..|+.....
T Consensus       495 ~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          495 DLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence            999999999999999999999999986543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.47  E-value=8.9e-15  Score=122.36  Aligned_cols=92  Identities=26%  Similarity=0.340  Sum_probs=66.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||+++||++ |..||......      ... .....+         .....+..++..+.
T Consensus       253 ~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~------~~~-~~i~~~---------~~~~~~~~~~~~l~  316 (367)
T 3l9p_A          253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVL-EFVTSG---------GRMDPPKNCPGPVY  316 (367)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHH-HHHHTT---------CCCCCCTTCCHHHH
T ss_pred             ECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------HHH-HHHHcC---------CCCCCCccCCHHHH
Confidence            69999999999999999999999999998 88888532111      111 111111         11112223345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      +|+.+||+.+|.+||++.+|++.|+....
T Consensus       317 ~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          317 RIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            99999999999999999999999987533

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.47  E-value=1.4e-14  Score=119.29  Aligned_cols=92  Identities=21%  Similarity=0.270  Sum_probs=68.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+.+..++.++||||||++++|+++ |+.||.......   +             ...+........+...+..+.
T Consensus       186 ~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~-------------~~~~~~~~~~~~~~~~~~~l~  249 (327)
T 3lzb_A          186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---I-------------SSILEKGERLPQPPICTIDVY  249 (327)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---H-------------HHHHHTTCCCCCCTTBCHHHH
T ss_pred             cCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---H-------------HHHHHcCCCCCCCccCCHHHH
Confidence            68999999999999999999999999999 999986432211   1             111111111122223444789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .++.+||+.+|.+||++.++++.|+....
T Consensus       250 ~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          250 MIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999987643

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.47  E-value=4.5e-15  Score=122.11  Aligned_cols=93  Identities=23%  Similarity=0.322  Sum_probs=68.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |+.||......      ......          ........+..++..+.
T Consensus       221 ~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------~~~~~~----------~~~~~~~~~~~~~~~l~  284 (325)
T 3kul_A          221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR------DVISSV----------EEGYRLPAPMGCPHALH  284 (325)
T ss_dssp             SCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH------HHHHHH----------HTTCCCCCCTTCCHHHH
T ss_pred             cCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH------HHHHHH----------HcCCCCCCCCCcCHHHH
Confidence            68999998999999999999999999999 99998532111      111111          11111122233445799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      +++.+||+.+|++||++.+|++.|+.....
T Consensus       285 ~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          285 QLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            999999999999999999999999976543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.47  E-value=1.9e-14  Score=117.29  Aligned_cols=94  Identities=23%  Similarity=0.429  Sum_probs=67.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||++++||++|+.||......    .....+... .+     ..+    ..+...+..+.+
T Consensus       170 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~-~~-----~~~----~~~~~~~~~l~~  235 (307)
T 2eva_A          170 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP----AFRIMWAVH-NG-----TRP----PLIKNLPKPIES  235 (307)
T ss_dssp             SCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS----HHHHHHHHH-TT-----CCC----CCBTTCCHHHHH
T ss_pred             EChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc----HHHHHHHHh-cC-----CCC----CcccccCHHHHH
Confidence            6899999889999999999999999999999998643221    111111111 11     111    112223347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      ++.+||+.+|++||++.+|++.|+....
T Consensus       236 li~~~l~~dp~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          236 LMTRCWSKDPSQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred             HHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999987544

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.47  E-value=2.1e-14  Score=120.44  Aligned_cols=91  Identities=25%  Similarity=0.313  Sum_probs=65.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++|||||||++||+++ |..||.......   .....   . .+.         ....+..++..+.
T Consensus       263 ~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~~---~-~~~---------~~~~p~~~~~~l~  326 (373)
T 3c1x_A          263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYL---L-QGR---------RLLQPEYCPDPLY  326 (373)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHHH---H-TTC---------CCCCCTTCCHHHH
T ss_pred             cChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHHH---H-cCC---------CCCCCCCCCHHHH
Confidence            68999999999999999999999999999 666665322211   11111   0 110         0111222345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||+.+|++||++.+|++.|+...
T Consensus       327 ~li~~cl~~dp~~RPs~~ell~~L~~i~  354 (373)
T 3c1x_A          327 EVMLKCWHPKAEMRPSFSELVSRISAIF  354 (373)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999999998753

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.47  E-value=1.1e-14  Score=119.57  Aligned_cols=92  Identities=22%  Similarity=0.320  Sum_probs=66.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||++++|+++ |+.||.......   ...    ....+         .....+..++..+.
T Consensus       184 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~~---------~~~~~~~~~~~~~~  247 (325)
T 3kex_A          184 MALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPD----LLEKG---------ERLAQPQICTIDVY  247 (325)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHH----HHHTT---------CBCCCCTTBCTTTT
T ss_pred             cChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHH----HHHcC---------CCCCCCCcCcHHHH
Confidence            68999998999999999999999999999 999986432211   111    11111         01111112233688


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .++.+||+.+|.+||++.+|++.|+....
T Consensus       248 ~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          248 MVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            89999999999999999999999987643

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.46  E-value=4.5e-14  Score=114.08  Aligned_cols=100  Identities=20%  Similarity=0.185  Sum_probs=66.1

Q ss_pred             CcccccccC------CCCchhhHHHHHHHHHHHHcC----------CCCCCCCCCCCCCchhHHHHHHhhcCccccccCC
Q 028061            1 MAPEYALWG------YLTYKADVYSFGVVALEIVSG----------KNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDP   64 (214)
Q Consensus         1 mAPE~~~~~------~~t~ksDVySfGivl~Ei~tg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (214)
                      +|||++...      .++.++|||||||+++||++|          +.||......... . .........    ....+
T Consensus       184 ~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~-~-~~~~~~~~~----~~~~~  257 (301)
T 3q4u_A          184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPS-F-EDMRKVVCV----DQQRP  257 (301)
T ss_dssp             CCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC-H-HHHHHHHTT----SCCCC
T ss_pred             eChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcc-h-hhhhHHHhc----cCCCC
Confidence            689998866      556899999999999999999          6776433222111 1 111111100    11111


Q ss_pred             ccCC-CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           65 RLGS-EFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        65 ~~~~-~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      .... ......+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus       258 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          258 NIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            1111 12234667899999999999999999999999999863

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.46  E-value=1.1e-14  Score=117.41  Aligned_cols=84  Identities=15%  Similarity=0.114  Sum_probs=60.3

Q ss_pred             CcccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+..+ +.++||||+||+++||++|+.||....      ........ ..+.      .    ..+...+..+.
T Consensus       178 ~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~------~~~~~~~i-~~~~------~----~~p~~~s~~~~  240 (275)
T 3hyh_A          178 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNI-SNGV------Y----TLPKFLSPGAA  240 (275)
T ss_dssp             SCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHH-HHTC------C----CCCTTSCHHHH
T ss_pred             CChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHH-HcCC------C----CCCCCCCHHHH
Confidence            79999987765 689999999999999999999996321      11111111 1111      1    11222334788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +|+.+||+.||++||++.++++
T Consensus       241 ~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          241 GLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHccCChhHCcCHHHHHc
Confidence            9999999999999999999986

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.46  E-value=9.7e-15  Score=124.18  Aligned_cols=87  Identities=22%  Similarity=0.265  Sum_probs=62.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....|+.++|||||||+++||++|+.||.....      ........      ....+.+  ..+......+.+
T Consensus       314 mAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~~~i~------~~~~~~~--~~~~~~s~~~~d  379 (423)
T 4fie_A          314 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAMKMIR------DNLPPRL--KNLHKVSPSLKG  379 (423)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHH------HSCCCCC--SCTTSSCHHHHH
T ss_pred             CCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHH------cCCCCCC--cccccCCHHHHH
Confidence            899999999999999999999999999999999953211      11111111      1111111  111123347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.||++||++.++++
T Consensus       380 li~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          380 FLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999986

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.46  E-value=2.6e-14  Score=114.52  Aligned_cols=90  Identities=23%  Similarity=0.299  Sum_probs=66.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||||++++|+++ |+.||......      ... .         .+........+...+..+.
T Consensus       181 ~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~------~~~-~---------~~~~~~~~~~~~~~~~~l~  244 (278)
T 1byg_A          181 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK------DVV-P---------RVEKGYKMDAPDGCPPAVY  244 (278)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG------GHH-H---------HHTTTCCCCCCTTCCHHHH
T ss_pred             cCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH------HHH-H---------HHhcCCCCCCcccCCHHHH
Confidence            68999988899999999999999999998 99988532211      111 1         1111111122223345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|.+||++.++++.|+..
T Consensus       245 ~li~~~l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          245 EVMKNCWHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence            999999999999999999999998864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.46  E-value=1.5e-14  Score=119.04  Aligned_cols=92  Identities=22%  Similarity=0.351  Sum_probs=67.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++||++ |+.||.....      .... .....+..         ...+..++..+.
T Consensus       243 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------~~~~-~~~~~~~~---------~~~~~~~~~~l~  306 (343)
T 1luf_A          243 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH------EEVI-YYVRDGNI---------LACPENCPLELY  306 (343)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHH-HHHHTTCC---------CCCCTTCCHHHH
T ss_pred             cChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh------HHHH-HHHhCCCc---------CCCCCCCCHHHH
Confidence            68999998899999999999999999999 8889853211      1111 11111111         112223345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      +++.+||+.+|++||++.+|++.|+....
T Consensus       307 ~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          307 NLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999997654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.46  E-value=1.7e-14  Score=128.86  Aligned_cols=89  Identities=24%  Similarity=0.277  Sum_probs=67.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++|||||||+++||++ |+.||......      . ...         .+........+..++..+.
T Consensus       539 ~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~------~-~~~---------~i~~~~~~~~p~~~~~~l~  602 (635)
T 4fl3_A          539 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------E-VTA---------MLEKGERMGCPAGCPREMY  602 (635)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------H-HHH---------HHHTTCCCCCCTTCCHHHH
T ss_pred             eChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------H-HHH---------HHHcCCCCCCCCCCCHHHH
Confidence            69999999999999999999999999998 99998532211      1 111         1111112223334556899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +++.+||+.+|++||++.+|++.|+.
T Consensus       603 ~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          603 DLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            99999999999999999999999885

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.46  E-value=1.4e-14  Score=117.00  Aligned_cols=90  Identities=24%  Similarity=0.285  Sum_probs=66.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||||++++|+++ |+.||......      . .......+         .....+...+..+.
T Consensus       187 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~-~~~~~~~~---------~~~~~~~~~~~~l~  250 (291)
T 1xbb_A          187 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------E-VTAMLEKG---------ERMGCPAGCPREMY  250 (291)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------H-HHHHHHTT---------CCCCCCTTCCHHHH
T ss_pred             eChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH------H-HHHHHHcC---------CCCCCCCCCCHHHH
Confidence            58999988889999999999999999999 99998532211      1 11111111         11122223445799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      .++.+||+.+|.+||++.+|++.|+..
T Consensus       251 ~li~~~l~~dp~~Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          251 DLMNLCWTYDVENRPGFAAVELRLRNY  277 (291)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.45  E-value=9.4e-15  Score=119.39  Aligned_cols=84  Identities=20%  Similarity=0.215  Sum_probs=60.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..|+.++||||+||+++||++|+.||.....      .+...... .+        ..  ..|...+..+.+
T Consensus       193 mAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~i~-~~--------~~--~~p~~~s~~~~~  255 (304)
T 3ubd_A          193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR------KETMTMIL-KA--------KL--GMPQFLSPEAQS  255 (304)
T ss_dssp             CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-HC--------CC--CCCTTSCHHHHH
T ss_pred             CCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH------HHHHHHHH-cC--------CC--CCCCcCCHHHHH
Confidence            899999999999999999999999999999999963211      11111111 11        11  112223447899


Q ss_pred             HHHHhhccCCCCCCCH-----HHHHH
Q 028061           81 IALLCTNASPSLRPTM-----SEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~-----~~v~~  101 (214)
                      |+.+||+.||++||++     .++++
T Consensus       256 li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          256 LLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             HHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             HHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            9999999999999984     56653

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.45  E-value=2.5e-14  Score=114.90  Aligned_cols=90  Identities=24%  Similarity=0.364  Sum_probs=65.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||||++++|+++ |..||.......   ...   .. ..+         .....+...+..+.
T Consensus       184 ~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~~---~i-~~~---------~~~~~~~~~~~~l~  247 (281)
T 1mp8_A          184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIG---RI-ENG---------ERLPMPPNCPPTLY  247 (281)
T ss_dssp             CCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH---HH-HTT---------CCCCCCTTCCHHHH
T ss_pred             cChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HHH---HH-HcC---------CCCCCCCCCCHHHH
Confidence            68999988899999999999999999997 888886432211   111   11 011         01112223445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      .++.+||+.+|++||++.+|++.|+..
T Consensus       248 ~li~~~l~~~p~~Rps~~~l~~~l~~~  274 (281)
T 1mp8_A          248 SLMTKCWAYDPSRRPRFTELKAQLSTI  274 (281)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999998864

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.45  E-value=2e-14  Score=115.31  Aligned_cols=90  Identities=26%  Similarity=0.383  Sum_probs=65.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||||++++|+++ |+.||.......   ...   .. ..+         .....+...+..+.
T Consensus       181 ~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~---~~-~~~---------~~~~~~~~~~~~l~  244 (281)
T 3cc6_A          181 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIG---VL-EKG---------DRLPKPDLCPPVLY  244 (281)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHH---HH-HHT---------CCCCCCTTCCHHHH
T ss_pred             eCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHH---HH-hcC---------CCCCCCCCCCHHHH
Confidence            68999988899999999999999999998 999985322211   111   11 000         00111222344789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      .++.+||+.+|++||++.++++.|+..
T Consensus       245 ~li~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          245 TLMTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHccCCchhCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.45  E-value=2.3e-14  Score=118.14  Aligned_cols=91  Identities=21%  Similarity=0.349  Sum_probs=66.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |+.||.....      .... .....+         .....+..++..+.
T Consensus       217 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~~~-~~~~~~---------~~~~~~~~~~~~l~  280 (333)
T 1mqb_A          217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN------HEVM-KAINDG---------FRLPTPMDCPSAIY  280 (333)
T ss_dssp             SCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHH-HHHHTT---------CCCCCCTTCBHHHH
T ss_pred             cCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH------HHHH-HHHHCC---------CcCCCcccCCHHHH
Confidence            68999988899999999999999999998 9999853211      1111 111111         11112223445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||+.+|.+||++.+|++.|+...
T Consensus       281 ~li~~~l~~~p~~Rps~~~l~~~L~~~~  308 (333)
T 1mqb_A          281 QLMMQCWQQERARRPKFADIVSILDKLI  308 (333)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999999998754

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.45  E-value=1.2e-14  Score=120.52  Aligned_cols=91  Identities=32%  Similarity=0.363  Sum_probs=66.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++|||||||+++||++ |+.||.......      ........+         .....+......+.
T Consensus       262 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~---------~~~~~~~~~~~~l~  326 (359)
T 3vhe_A          262 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEG---------TRMRAPDYTTPEMY  326 (359)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHT---------CCCCCCTTCCHHHH
T ss_pred             EChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHHcC---------CCCCCCCCCCHHHH
Confidence            68999999999999999999999999998 999985432211      111111111         11111222334789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|.+||++.+|++.|+..
T Consensus       327 ~li~~~l~~dP~~Rps~~ell~~L~~~  353 (359)
T 3vhe_A          327 QTMLDCWHGEPSQRPTFSELVEHLGNL  353 (359)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            999999999999999999999999864

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.45  E-value=1.9e-14  Score=116.94  Aligned_cols=90  Identities=31%  Similarity=0.435  Sum_probs=66.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+.+..++.++||||||++++||++ |+.||.......   +.    .....+         .....+...+..+.
T Consensus       219 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~----~~~~~~---------~~~~~~~~~~~~~~  282 (314)
T 2ivs_A          219 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER---LF----NLLKTG---------HRMERPDNCSEEMY  282 (314)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HH----HHHHTT---------CCCCCCTTCCHHHH
T ss_pred             cChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHhhcC---------CcCCCCccCCHHHH
Confidence            68999988899999999999999999999 999985432211   11    111111         11112223345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.+|++.|+++
T Consensus       283 ~li~~~l~~dp~~Rps~~~l~~~l~~~  309 (314)
T 2ivs_A          283 RLMLQCWKQEPDKRPVFADISKDLEKM  309 (314)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999998864

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.45  E-value=1.7e-14  Score=116.27  Aligned_cols=90  Identities=19%  Similarity=0.238  Sum_probs=66.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |+.||......      ... .....+         .....+...+..+.
T Consensus       180 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~-~~i~~~---------~~~~~~~~~~~~l~  243 (287)
T 1u59_A          180 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP------EVM-AFIEQG---------KRMECPPECPPELY  243 (287)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH------HHH-HHHHTT---------CCCCCCTTCCHHHH
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH------HHH-HHHhcC---------CcCCCCCCcCHHHH
Confidence            68999988889999999999999999998 99998543211      111 111111         11122233445899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|.+||++.+|++.|+..
T Consensus       244 ~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          244 ALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999998864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.45  E-value=2.2e-15  Score=121.87  Aligned_cols=99  Identities=19%  Similarity=0.252  Sum_probs=67.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC-------ccccccCCccCCCCCHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG-------TLMEFVDPRLGSEFNKV   73 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~   73 (214)
                      +|||.+....++.++||||||++++|+++|..|+.....       .+........       .+.+.+........+..
T Consensus       184 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (295)
T 3ugc_A          184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA-------EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDG  256 (295)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHH-------HHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTT
T ss_pred             eCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChH-------HHHhhhcCccccchhHHHHHHHHhccCcCCCCcC
Confidence            689999989999999999999999999999988743110       0000000000       01111111112223334


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           74 EAERMIKIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        74 ~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++..+.+++.+||+.+|++||++.+|++.|+..
T Consensus       257 ~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l  289 (295)
T 3ugc_A          257 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  289 (295)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            556899999999999999999999999999864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.45  E-value=1.5e-14  Score=119.29  Aligned_cols=93  Identities=28%  Similarity=0.365  Sum_probs=67.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+..+.++.++||||||++++||++ |..||.......      .......         .......+...+..+.
T Consensus       241 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~~~~~---------~~~~~~~~~~~~~~l~  305 (344)
T 1rjb_A          241 MAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA------NFYKLIQ---------NGFKMDQPFYATEEIY  305 (344)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHH---------TTCCCCCCTTCCHHHH
T ss_pred             cCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH------HHHHHHh---------cCCCCCCCCCCCHHHH
Confidence            68999998999999999999999999998 999986432211      1111111         1111122223345799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .++.+||+.+|.+||++.+|++.|+....
T Consensus       306 ~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          306 IIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999997544

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.45  E-value=1.6e-14  Score=121.25  Aligned_cols=92  Identities=30%  Similarity=0.395  Sum_probs=67.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++.+..++.++|||||||+++|+++ |+.||.....      .. .......+         .....+..++..+.
T Consensus       260 ~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~------~~-~~~~~~~~---------~~~~~~~~~~~~l~  323 (382)
T 3tt0_A          260 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------EE-LFKLLKEG---------HRMDKPSNCTNELY  323 (382)
T ss_dssp             SCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HH-HHHHHHTT---------CCCCCCSSCCHHHH
T ss_pred             eCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH------HH-HHHHHHcC---------CCCCCCccCCHHHH
Confidence            68999999999999999999999999999 9988853211      11 11111111         11111222344789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .++.+||+.+|++||++.+|++.|+....
T Consensus       324 ~li~~~l~~dP~~Rps~~ell~~L~~~~~  352 (382)
T 3tt0_A          324 MMMRDCWHAVPSQRPTFKQLVEDLDRIVA  352 (382)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999987643

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.44  E-value=1.7e-14  Score=119.43  Aligned_cols=101  Identities=12%  Similarity=0.035  Sum_probs=66.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++|||||||+++||++|+.||....... ........... . .+...+.....   ....+..+.+
T Consensus       227 ~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~~---~~~~~~~l~~  300 (345)
T 2v62_A          227 TSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP-VAVQTAKTNLL-D-ELPQSVLKWAP---SGSSCCEIAQ  300 (345)
T ss_dssp             CCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH-HHHHHHHHHHH-H-TTTHHHHHHSC---TTSCCHHHHH
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc-HHHHHHHHhhc-c-cccHHHHhhcc---ccccHHHHHH
Confidence            68999998899999999999999999999999995211110 00000000000 0 00000000000   0013347999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      ++.+||+.+|++||++.+|++.|+...
T Consensus       301 li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          301 FLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            999999999999999999999998754

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.44  E-value=2e-14  Score=116.84  Aligned_cols=91  Identities=26%  Similarity=0.446  Sum_probs=65.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++||++ |+.||.......      .........     ..    ...+...+..+.
T Consensus       214 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~-----~~----~~~~~~~~~~l~  278 (313)
T 1t46_A          214 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------KFYKMIKEG-----FR----MLSPEHAPAEMY  278 (313)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH------HHHHHHHHT-----CC----CCCCTTSCHHHH
T ss_pred             eChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh------HHHHHhccC-----CC----CCCcccCCHHHH
Confidence            68999998999999999999999999998 998885432211      111111110     11    111222344789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|.+||++.+|++.|+..
T Consensus       279 ~li~~~l~~dp~~Rps~~ell~~L~~~  305 (313)
T 1t46_A          279 DIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (313)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.44  E-value=2e-14  Score=116.99  Aligned_cols=92  Identities=26%  Similarity=0.330  Sum_probs=65.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||++++|+++|..|+.............          .....+...    +..++..+.+
T Consensus       189 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~----------~~~~~~~~~----~~~~~~~l~~  254 (310)
T 3s95_A          189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN----------VRGFLDRYC----PPNCPPSFFP  254 (310)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC----------HHHHHHHTC----CTTCCTTHHH
T ss_pred             eCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh----------hhccccccC----CCCCCHHHHH
Confidence            68999999999999999999999999999998875432221110000          001111111    1122336889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++.+||+.+|++||++.+|++.|+..
T Consensus       255 li~~~l~~dP~~Rps~~~l~~~L~~l  280 (310)
T 3s95_A          255 ITVRCCDLDPEKRPSFVKLEHWLETL  280 (310)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHH
Confidence            99999999999999999999998864

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.44  E-value=1.7e-14  Score=118.51  Aligned_cols=91  Identities=25%  Similarity=0.369  Sum_probs=65.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+.+..++.++||||||++++||++ |..||.......      ........         ......+...+..+.
T Consensus       233 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~~~~~~---------~~~~~~~~~~~~~l~  297 (333)
T 2i1m_A          233 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS------KFYKLVKD---------GYQMAQPAFAPKNIY  297 (333)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH------HHHHHHHH---------TCCCCCCTTCCHHHH
T ss_pred             cCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH------HHHHHHhc---------CCCCCCCCCCCHHHH
Confidence            68999988899999999999999999998 888885322111      11111111         111111222344789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      .++.+||+.+|.+||++.+|++.|+..
T Consensus       298 ~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          298 SIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhccChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999998854

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.44  E-value=2.4e-14  Score=114.14  Aligned_cols=90  Identities=23%  Similarity=0.354  Sum_probs=65.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||+|++++|+++ |+.||.....      ........ .+         .....+...+..+.
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~------~~~~~~~~-~~---------~~~~~~~~~~~~~~  237 (269)
T 4hcu_A          174 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SEVVEDIS-TG---------FRLYKPRLASTHVY  237 (269)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHH-TT---------CCCCCCTTSCHHHH
T ss_pred             CCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH------HHHHHHHh-cC---------ccCCCCCcCCHHHH
Confidence            68999998999999999999999999999 8888853211      11111111 10         11111222344789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      .++.+||+.+|++||++.++++.|+..
T Consensus       238 ~li~~~l~~~p~~Rps~~~ll~~l~~l  264 (269)
T 4hcu_A          238 QIMNHCWRERPEDRPAFSRLLRQLAEI  264 (269)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.44  E-value=3.6e-14  Score=116.06  Aligned_cols=93  Identities=23%  Similarity=0.287  Sum_probs=67.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||||++++|+++ |+.||.......   ...   ... .+         .....+...+..+.
T Consensus       206 ~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~---~~~-~~---------~~~~~~~~~~~~l~  269 (323)
T 3qup_A          206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---IYN---YLI-GG---------NRLKQPPECMEEVY  269 (323)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH---HHH-TT---------CCCCCCTTCCHHHH
T ss_pred             cCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---HHH---HHh-cC---------CCCCCCCccCHHHH
Confidence            68999988999999999999999999999 888886422211   111   110 00         01111223345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      +++.+||+.+|++||++.++++.|+....-
T Consensus       270 ~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          270 DLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            999999999999999999999999875443

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.43  E-value=2.3e-14  Score=114.13  Aligned_cols=92  Identities=24%  Similarity=0.392  Sum_probs=66.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||||++++|+++ |+.||......      ....... .+.         ....+...+..+.
T Consensus       172 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~-~~~---------~~~~~~~~~~~l~  235 (268)
T 3sxs_A          172 SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS------EVVLKVS-QGH---------RLYRPHLASDTIY  235 (268)
T ss_dssp             CCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHH-TTC---------CCCCCTTSCHHHH
T ss_pred             CCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH------HHHHHHH-cCC---------CCCCCCcChHHHH
Confidence            68999988899999999999999999999 99998532211      1111111 000         0011111234789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      +++.+||+.+|.+||++.++++.|+...+
T Consensus       236 ~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          236 QIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            99999999999999999999999997654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.43  E-value=1.8e-13  Score=112.27  Aligned_cols=103  Identities=20%  Similarity=0.192  Sum_probs=66.6

Q ss_pred             CcccccccCCCCch------hhHHHHHHHHHHHHcC----------CCCCCCCCCCCCCchhHHHHHHhhcCccccccCC
Q 028061            1 MAPEYALWGYLTYK------ADVYSFGVVALEIVSG----------KNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDP   64 (214)
Q Consensus         1 mAPE~~~~~~~t~k------sDVySfGivl~Ei~tg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (214)
                      +|||++.......+      +|||||||++|||++|          +.||.........  .........    .....+
T Consensus       213 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~----~~~~~~  286 (337)
T 3mdy_A          213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPS--YEDMREIVC----IKKLRP  286 (337)
T ss_dssp             CCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC--HHHHHHHHT----TSCCCC
T ss_pred             eChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCc--hhhhHHHHh----hhccCc
Confidence            68999887666554      9999999999999999          4555332221111  011111110    111111


Q ss_pred             ccCCC-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           65 RLGSE-FNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        65 ~~~~~-~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      ..... ....++..+.+++.+||+.+|.+||++.+|++.|+.....
T Consensus       287 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          287 SFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             CCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             cccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence            11111 1235778899999999999999999999999999876543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.43  E-value=1e-13  Score=115.58  Aligned_cols=100  Identities=7%  Similarity=-0.037  Sum_probs=67.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.......  .......... ...+..++++.+..   ..++..+..
T Consensus       228 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~  301 (364)
T 3op5_A          228 TSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP--KYVRDSKIRY-RENIASLMDKCFPA---ANAPGEIAK  301 (364)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH--HHHHHHHHHH-HHCHHHHHHHHSCT---TCCCHHHHH
T ss_pred             cCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH--HHHHHHHHHh-hhhHHHHHHHhccc---ccCHHHHHH
Confidence            68999998899999999999999999999999996322111  1111111110 11122222222110   112347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++..||+.+|.+||++.+|++.|+..
T Consensus       302 li~~cl~~~p~~RP~~~~l~~~l~~~  327 (364)
T 3op5_A          302 YMETVKLLDYTEKPLYENLRDILLQG  327 (364)
T ss_dssp             HHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999988864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.42  E-value=5.3e-14  Score=114.58  Aligned_cols=90  Identities=28%  Similarity=0.285  Sum_probs=65.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||||++++||++ |..||.......   ...   .. ..+         .....+...+..+.
T Consensus       216 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~---~~-~~~---------~~~~~~~~~~~~l~  279 (313)
T 3brb_A          216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---MYD---YL-LHG---------HRLKQPEDCLDELY  279 (313)
T ss_dssp             SCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH---HH-HTT---------CCCCCBTTCCHHHH
T ss_pred             cCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHH---HH-HcC---------CCCCCCccccHHHH
Confidence            58999988899999999999999999999 888885322111   111   11 011         01112223345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|.+||++.+|+..|+..
T Consensus       280 ~li~~~l~~dp~~Rps~~~l~~~L~~l  306 (313)
T 3brb_A          280 EIMYSCWRTDPLDRPTFSVLRLQLEKL  306 (313)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.42  E-value=3.5e-14  Score=112.79  Aligned_cols=90  Identities=23%  Similarity=0.354  Sum_probs=65.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||||++++|+++ |+.||.....      ........ .+         .....+...+..+.
T Consensus       172 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~i~-~~---------~~~~~~~~~~~~l~  235 (267)
T 3t9t_A          172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SEVVEDIS-TG---------FRLYKPRLASTHVY  235 (267)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHH-TT---------CCCCCCTTSCHHHH
T ss_pred             cChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH------HHHHHHHh-cC---------CcCCCCccCcHHHH
Confidence            58999988899999999999999999999 8888853211      11111111 11         00111122334789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||++.++++.|+..
T Consensus       236 ~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (267)
T 3t9t_A          236 QIMNHCWRERPEDRPAFSRLLRQLAEI  262 (267)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.42  E-value=5.6e-14  Score=112.93  Aligned_cols=90  Identities=26%  Similarity=0.382  Sum_probs=66.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||||++++|+++ |..||.......   ..             ..+........+...+..+.
T Consensus       179 ~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~-------------~~~~~~~~~~~~~~~~~~l~  242 (288)
T 3kfa_A          179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VY-------------ELLEKDYRMERPEGCPEKVY  242 (288)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HH-------------HHHHTTCCCCCCTTCCHHHH
T ss_pred             CChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH-------------HHHhccCCCCCCCCCCHHHH
Confidence            68999998999999999999999999999 888885322111   11             11111111122223345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|.+||++.+|++.|+..
T Consensus       243 ~li~~~l~~dp~~Rps~~~~~~~l~~~  269 (288)
T 3kfa_A          243 ELMRACWQWNPSDRPSFAEIHQAFETM  269 (288)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999998864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.42  E-value=3.3e-14  Score=115.65  Aligned_cols=91  Identities=33%  Similarity=0.376  Sum_probs=65.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |+.||.......      ........+.     ..    ..+......+.
T Consensus       217 ~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~~~~~~~-----~~----~~~~~~~~~l~  281 (316)
T 2xir_A          217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGT-----RM----RAPDYTTPEMY  281 (316)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH------HHHHHHHHTC-----CC----CCCTTCCHHHH
T ss_pred             cCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH------HHHHHhccCc-----cC----CCCCCCCHHHH
Confidence            68999998999999999999999999998 999985432111      1111111110     01    11122334789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|.+||++.+|++.|+..
T Consensus       282 ~li~~~l~~dp~~Rps~~ell~~L~~~  308 (316)
T 2xir_A          282 QTMLDCWHGEPSQRPTFSELVEHLGNL  308 (316)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.41  E-value=2.8e-14  Score=114.78  Aligned_cols=93  Identities=16%  Similarity=0.204  Sum_probs=66.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++|+++ |+.||.....      ..........         ......+...+..+.
T Consensus       191 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~---------~~~~~~~~~~~~~l~  255 (291)
T 1u46_A          191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG------SQILHKIDKE---------GERLPRPEDCPQDIY  255 (291)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTS---------CCCCCCCTTCCHHHH
T ss_pred             eCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH------HHHHHHHHcc---------CCCCCCCcCcCHHHH
Confidence            58999988889999999999999999999 9999853211      1111111111         111111223345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      +++.+||+.+|++||++.++++.|+....
T Consensus       256 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          256 NVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence            99999999999999999999999987543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.41  E-value=3.9e-14  Score=113.70  Aligned_cols=90  Identities=26%  Similarity=0.380  Sum_probs=65.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....++.++||||||++++|+++ |+.||......      ....... .         ......+...+..+.
T Consensus       188 ~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~------~~~~~~~-~---------~~~~~~~~~~~~~l~  251 (283)
T 3gen_A          188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS------ETAEHIA-Q---------GLRLYRPHLASEKVY  251 (283)
T ss_dssp             CCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHH-T---------TCCCCCCTTCCHHHH
T ss_pred             CCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh------HHHHHHh-c---------ccCCCCCCcCCHHHH
Confidence            68999998899999999999999999998 99998532211      1111111 0         111111122234789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|.+||++.++++.|+..
T Consensus       252 ~li~~~l~~~p~~Rps~~~ll~~L~~~  278 (283)
T 3gen_A          252 TIMYSCWHEKADERPTFKILLSNILDV  278 (283)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            999999999999999999999998864

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.41  E-value=1.2e-13  Score=111.40  Aligned_cols=96  Identities=26%  Similarity=0.472  Sum_probs=66.5

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||.+.   ...++.++||||||++++|+++|+.||......      .........+...    +.. ......++..
T Consensus       189 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~----~~~-~~~~~~~~~~  257 (289)
T 3og7_A          189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR------DQIIEMVGRGSLS----PDL-SKVRSNCPKR  257 (289)
T ss_dssp             CCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH------HHHHHHHHHTSCC----CCT-TSSCTTSCHH
T ss_pred             cCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH------HHHHHHhcccccC----cch-hhccccCCHH
Confidence            6899886   567889999999999999999999999632211      1111111111111    111 1112234458


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +.+++.+||+.+|.+||++.+|++.|+...
T Consensus       258 l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          258 MKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            999999999999999999999999998764

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.41  E-value=2.7e-13  Score=111.39  Aligned_cols=96  Identities=9%  Similarity=0.008  Sum_probs=65.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||....................... .+.    +..    ..+ .+..
T Consensus       184 ~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~-~~~----~~~----~~p-~~~~  253 (330)
T 2izr_A          184 MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP-IEV----LCE----NFP-EMAT  253 (330)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC-HHH----HTT----TCH-HHHH
T ss_pred             cChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC-HHH----Hhc----cCh-HHHH
Confidence            689999999999999999999999999999999975432221111111100000000 000    000    123 7999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++.+||+.+|.+||++.+|++.|+..
T Consensus       254 li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          254 YLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             HHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999988753

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.41  E-value=2.8e-14  Score=117.47  Aligned_cols=91  Identities=29%  Similarity=0.371  Sum_probs=66.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++.+..++.++||||||++++||++ |+.||.....      .... .....+.     .    ...+..++..+.
T Consensus       226 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~-~~~~~~~-----~----~~~~~~~~~~l~  289 (334)
T 2pvf_A          226 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV------EELF-KLLKEGH-----R----MDKPANCTNELY  289 (334)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHH-HHHHHTC-----C----CCCCTTCCHHHH
T ss_pred             eChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH------HHHH-HHHhcCC-----C----CCCCccCCHHHH
Confidence            68999988899999999999999999999 9988853211      1111 1111110     1    111222344789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      .++.+||+.+|.+||++.+|++.|+...
T Consensus       290 ~li~~~l~~dp~~Rps~~ell~~L~~l~  317 (334)
T 2pvf_A          290 MMMRDCWHAVPSQRPTFKQLVEDLDRIL  317 (334)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999999998754

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.41  E-value=4.4e-14  Score=115.26  Aligned_cols=83  Identities=17%  Similarity=0.249  Sum_probs=56.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..|+.++|||||||+++||++   ||...        .+....      +..+..... ++...........
T Consensus       197 mAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~--------~~~~~~------~~~~~~~~~-p~~~~~~~~~~~~  258 (299)
T 4g31_A          197 MSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ--------MERVRT------LTDVRNLKF-PPLFTQKYPCEYV  258 (299)
T ss_dssp             SCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH--------HHHHHH------HHHHHTTCC-CHHHHHHCHHHHH
T ss_pred             cCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc--------cHHHHH------HHHHhcCCC-CCCCcccCHHHHH
Confidence            79999999999999999999999999996   65310        000000      011111111 1111223345678


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.||++||++.++++
T Consensus       259 li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          259 MVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999986

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.41  E-value=4.4e-14  Score=115.72  Aligned_cols=89  Identities=13%  Similarity=0.141  Sum_probs=56.4

Q ss_pred             Cccccc---ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYA---LWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~---~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||++   ....++.++|||||||+++||++|+.||.......                   ++...............
T Consensus       217 ~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-------------------~~~~~~~~~~~~~~~~~  277 (337)
T 3ll6_A          217 RTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-------------------IVNGKYSIPPHDTQYTV  277 (337)
T ss_dssp             -------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------------------------CCCCTTCCSSGG
T ss_pred             CChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-------------------hhcCcccCCcccccchH
Confidence            589988   46678999999999999999999999985321110                   01111100011111235


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      +..++.+||+.+|.+||++.++++.|+....
T Consensus       278 ~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          278 FHSLIRAMLQVNPEERLSIAEVVHQLQEIAA  308 (337)
T ss_dssp             GHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            7889999999999999999999999987543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.41  E-value=1e-13  Score=115.77  Aligned_cols=93  Identities=10%  Similarity=-0.068  Sum_probs=62.7

Q ss_pred             Cccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~--~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||++..  ..++.++|||||||+++||++|+.||..........        +.....................+..+
T Consensus       258 ~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (371)
T 3q60_A          258 APREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS--------WKRPSLRVPGTDSLAFGSCTPLPDFV  329 (371)
T ss_dssp             CCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTC--------CCBCCTTSCCCCSCCCTTSSCCCHHH
T ss_pred             cChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccc--------hhhhhhhhccccccchhhccCCCHHH
Confidence            69999987  689999999999999999999999996543221100        00000011111111111112334578


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+|+.+||+.||++||++.++++
T Consensus       330 ~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          330 KTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             HHHHHHHcCCChhhCCCHHHHhc
Confidence            99999999999999999999864

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.41  E-value=3e-13  Score=117.19  Aligned_cols=97  Identities=9%  Similarity=0.033  Sum_probs=67.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||++|||++|+.||..............+........+..+.     ..    ++..+..
T Consensus       180 ~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~-----~~----~p~~l~~  250 (483)
T 3sv0_A          180 ASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALC-----RG----YPTEFAS  250 (483)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHH-----TT----SCHHHHH
T ss_pred             cCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHh-----cC----CcHHHHH
Confidence            68999999999999999999999999999999997543332111111111110000000000     11    2347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++.+||+.+|++||++.+|++.|+..
T Consensus       251 li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          251 YFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            99999999999999999999988763

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.41  E-value=3.9e-14  Score=113.46  Aligned_cols=90  Identities=30%  Similarity=0.423  Sum_probs=65.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+..+.++.++||||||++++|+++ |+.||.....      ....... ..+         .....+...+..+.
T Consensus       177 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~-~~~---------~~~~~~~~~~~~l~  240 (279)
T 1qpc_A          177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNL-ERG---------YRMVRPDNCPEELY  240 (279)
T ss_dssp             SCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHHH-HTT---------CCCCCCTTCCHHHH
T ss_pred             cChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH------HHHHHHH-hcc---------cCCCCcccccHHHH
Confidence            58999988899999999999999999999 8888853211      1111111 111         11111222345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      .++.+||+.+|++||++.++++.|+..
T Consensus       241 ~li~~~l~~~p~~Rps~~~l~~~l~~~  267 (279)
T 1qpc_A          241 QLMRLCWKERPEDRPTFDYLRSVLEDF  267 (279)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhccChhhCCCHHHHHHHHHHH
Confidence            999999999999999999999998864

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.40  E-value=8.3e-14  Score=112.38  Aligned_cols=91  Identities=23%  Similarity=0.217  Sum_probs=63.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+....++.++||||||++++|+++|+.|+.....  .......   . ..         ......+...+..+.+
T Consensus       195 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~~~~---~-~~---------~~~~~~~~~~~~~l~~  259 (298)
T 3pls_A          195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDLTHF---L-AQ---------GRRLPQPEYCPDSLYQ  259 (298)
T ss_dssp             SCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGHHHH---H-HT---------TCCCCCCTTCCHHHHH
T ss_pred             cChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHHHHH---h-hc---------CCCCCCCccchHHHHH
Confidence            589999888999999999999999999996665432111  1111111   0 00         0111112223447899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++.+||+.+|.+||++.++++.|+..
T Consensus       260 li~~~l~~~p~~Rps~~~ll~~l~~~  285 (298)
T 3pls_A          260 VMQQCWEADPAVRPTFRVLVGEVEQI  285 (298)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHH
Confidence            99999999999999999999999864

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.40  E-value=5.6e-14  Score=115.28  Aligned_cols=91  Identities=26%  Similarity=0.346  Sum_probs=65.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++..+.++.++||||||++++||++ |+.||.....      .... .....+.         ....+..++..+.
T Consensus       212 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~-~~~~~~~---------~~~~~~~~~~~l~  275 (327)
T 2yfx_A          212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------QEVL-EFVTSGG---------RMDPPKNCPGPVY  275 (327)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHH-HHHHTTC---------CCCCCTTCCHHHH
T ss_pred             eCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH------HHHH-HHHhcCC---------CCCCCCCCCHHHH
Confidence            68999988999999999999999999998 8888853211      1111 1111110         0111222344789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||+.+|.+||++.+|++.|+...
T Consensus       276 ~li~~~l~~dp~~Rps~~~ll~~l~~~~  303 (327)
T 2yfx_A          276 RIMTQCWQHQPEDRPNFAIILERIEYCT  303 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence            9999999999999999999999988653

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.40  E-value=5.7e-14  Score=115.24  Aligned_cols=91  Identities=23%  Similarity=0.261  Sum_probs=66.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....++.++||||||++++||++ |+.||.....      .......          ........+...+..+.
T Consensus       208 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~~~~~~----------~~~~~~~~~~~~~~~l~  271 (327)
T 1fvr_A          208 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEKL----------PQGYRLEKPLNCDDEVY  271 (327)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHG----------GGTCCCCCCTTBCHHHH
T ss_pred             cChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH------HHHHHHh----------hcCCCCCCCCCCCHHHH
Confidence            58999988889999999999999999998 9999853211      1111111          11111112223345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||+.+|.+||++.++++.|+...
T Consensus       272 ~li~~~l~~dp~~Rps~~ell~~L~~~~  299 (327)
T 1fvr_A          272 DLMRQCWREKPYERPSFAQILVSLNRML  299 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999999988643

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.40  E-value=6.5e-14  Score=114.38  Aligned_cols=91  Identities=24%  Similarity=0.387  Sum_probs=66.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++.+..++.++||||||++++|+++ |+.||.....      .... .....+..         ...+...+..+.
T Consensus       207 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~-~~~~~~~~---------~~~~~~~~~~l~  270 (322)
T 1p4o_A          207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------EQVL-RFVMEGGL---------LDKPDNCPDMLF  270 (322)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH------HHHH-HHHHTTCC---------CCCCTTCCHHHH
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH------HHHH-HHHHcCCc---------CCCCCCCCHHHH
Confidence            68999998999999999999999999999 7888853211      1111 11111111         111222345789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||+.+|.+||++.++++.|+...
T Consensus       271 ~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          271 ELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence            9999999999999999999999998753

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.39  E-value=1.6e-13  Score=111.84  Aligned_cols=94  Identities=19%  Similarity=0.247  Sum_probs=64.3

Q ss_pred             CcccccccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALWG---YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~~---~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||++...   .++.++||||||++++||++|+.||.......              ..+...+......+.....+..
T Consensus       210 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~  275 (317)
T 2buj_A          210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG--------------DSVALAVQNQLSIPQSPRHSSA  275 (317)
T ss_dssp             CCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT--------------SCHHHHHHCC--CCCCTTSCHH
T ss_pred             CCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc--------------chhhHHhhccCCCCccccCCHH
Confidence            689988744   37899999999999999999999984210000              0000000001111111223447


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      +.+++.+||+.+|.+||++.+|++.|+....
T Consensus       276 l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          276 LWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             HHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence            8999999999999999999999999997654

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.39  E-value=9.5e-14  Score=117.09  Aligned_cols=88  Identities=22%  Similarity=0.390  Sum_probs=60.3

Q ss_pred             Cccccccc-----------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCC
Q 028061            1 MAPEYALW-----------GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSE   69 (214)
Q Consensus         1 mAPE~~~~-----------~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (214)
                      ||||++..           ..++.++|||||||+++||++|+.||.....     ....         +..++++.....
T Consensus       223 ~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~---------~~~~~~~~~~~~  288 (390)
T 2zmd_A          223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISK---------LHAIIDPNHEIE  288 (390)
T ss_dssp             CCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----HHHH---------HHHHHCTTSCCC
T ss_pred             cChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-----HHHH---------HHHHhCccccCC
Confidence            68998864           4789999999999999999999999953211     1111         112222222112


Q ss_pred             CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           70 FNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        70 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      .+......+.+|+.+||+.||.+||++.+|++.
T Consensus       289 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            222223478899999999999999999999863

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.39  E-value=3.3e-14  Score=113.78  Aligned_cols=90  Identities=17%  Similarity=0.179  Sum_probs=63.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+....++.++||||||++++||++|+.||.....      ....... ..+..         ...+...+..+.+
T Consensus       183 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~i-~~~~~---------~~~~~~~~~~l~~  246 (279)
T 2w5a_A          183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ------KELAGKI-REGKF---------RRIPYRYSDELNE  246 (279)
T ss_dssp             CCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HHTCC---------CCCCTTSCHHHHH
T ss_pred             cChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH------HHHHHHH-hhccc---------ccCCcccCHHHHH
Confidence            689999888999999999999999999999999863211      1111111 11111         1112223447899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++.+||+.+|.+||++.+|++.+...
T Consensus       247 li~~~l~~~p~~Rps~~~ll~~~~~~  272 (279)
T 2w5a_A          247 IITRMLNLKDYHRPSVEEILENPLIL  272 (279)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred             HHHHHcCCCcccCCCHHHHHhChhhh
Confidence            99999999999999999999876543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.39  E-value=1.6e-13  Score=110.93  Aligned_cols=91  Identities=25%  Similarity=0.274  Sum_probs=63.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSG-KNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+.+..++.++||||||++++|+++| ..||.......   ...   ... .+         .....+...+..+.
T Consensus       199 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~---~~~-~~---------~~~~~~~~~~~~l~  262 (298)
T 3f66_A          199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITV---YLL-QG---------RRLLQPEYCPDPLY  262 (298)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHH---HHH-TT---------CCCCCCTTCCHHHH
T ss_pred             cChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHH---HHh-cC---------CCCCCCccCCHHHH
Confidence            589999888999999999999999999995 45554222111   111   110 00         00111122334789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||+.+|.+||++.++++.|+...
T Consensus       263 ~li~~~l~~~p~~Rps~~ell~~L~~~~  290 (298)
T 3f66_A          263 EVMLKCWHPKAEMRPSFSELVSRISAIF  290 (298)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999999999998753

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.39  E-value=2.5e-13  Score=111.53  Aligned_cols=103  Identities=16%  Similarity=0.113  Sum_probs=66.0

Q ss_pred             Cccccccc-------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCC-CCchhH----------HHHHHhhcCcccccc
Q 028061            1 MAPEYALW-------GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSN-CTCPLD----------WAFHLHQSGTLMEFV   62 (214)
Q Consensus         1 mAPE~~~~-------~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~-~~~~~~----------~~~~~~~~~~~~~~~   62 (214)
                      +|||++.+       ..++.++|||||||+++||++|+.|+....... ......          ........    ...
T Consensus       195 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  270 (336)
T 3g2f_A          195 MAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSR----EKQ  270 (336)
T ss_dssp             CCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTT----SCC
T ss_pred             eCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcc----ccc
Confidence            68998876       467789999999999999999977654322211 111000          00000000    111


Q ss_pred             CCccCCC--CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           63 DPRLGSE--FNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        63 ~~~~~~~--~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      .+.+...  .....+..+.+++.+||+.||++||++.+|++.|+...
T Consensus       271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          271 RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence            1111111  12346668999999999999999999999999998754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.39  E-value=9.5e-14  Score=114.84  Aligned_cols=88  Identities=22%  Similarity=0.390  Sum_probs=60.5

Q ss_pred             Cccccccc-----------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCC
Q 028061            1 MAPEYALW-----------GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSE   69 (214)
Q Consensus         1 mAPE~~~~-----------~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (214)
                      ||||++..           ..++.++|||||||+++||++|+.||.....     ....         +..++++.....
T Consensus       176 ~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~---------~~~~~~~~~~~~  241 (343)
T 3dbq_A          176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISK---------LHAIIDPNHEIE  241 (343)
T ss_dssp             CCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHH---------HHHHHCTTSCCC
T ss_pred             CCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-----HHHH---------HHHHhcCCcccC
Confidence            68998864           6789999999999999999999999853211     1111         111222222222


Q ss_pred             CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           70 FNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        70 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      .+......+.+++.+||+.+|.+||++.++++.
T Consensus       242 ~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          242 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            222233478899999999999999999999864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.38  E-value=1.2e-13  Score=112.36  Aligned_cols=96  Identities=17%  Similarity=0.227  Sum_probs=66.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++||++|+.||.....    ......... ......     ..   .....+..+..
T Consensus       203 ~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~-~~~~~~-----~~---~~~~~~~~l~~  269 (310)
T 2wqm_A          203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKI-EQCDYP-----PL---PSDHYSEELRQ  269 (310)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C----CHHHHHHHH-HTTCSC-----CC---CTTTSCHHHHH
T ss_pred             eChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----hHHHHHHHh-hcccCC-----CC---cccccCHHHHH
Confidence            689999989999999999999999999999999853211    111111111 111111     00   01123347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      ++.+||+.||.+||++.+|++.|+.+...
T Consensus       270 li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          270 LVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            99999999999999999999999876443

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.38  E-value=8.8e-14  Score=113.36  Aligned_cols=94  Identities=21%  Similarity=0.337  Sum_probs=63.6

Q ss_pred             Cccccccc---------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCC
Q 028061            1 MAPEYALW---------GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFN   71 (214)
Q Consensus         1 mAPE~~~~---------~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (214)
                      +|||++..         ..++.++||||||++++|+++|+.||.....      ....... ..+.     .+...   .
T Consensus       201 ~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~-~~~~-----~~~~~---~  265 (319)
T 2y4i_B          201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA------EAIIWQM-GTGM-----KPNLS---Q  265 (319)
T ss_dssp             SCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH------HHHHHHH-HTTC-----CCCCC---C
T ss_pred             cChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHh-ccCC-----CCCCC---c
Confidence            58998864         4578999999999999999999999853211      1111111 1111     11110   0


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           72 KVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        72 ~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      ...+..+.+++.+||+.+|++||++.+|++.|+.....
T Consensus       266 ~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          266 IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            01223688999999999999999999999999976543

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.38  E-value=2.3e-14  Score=117.31  Aligned_cols=83  Identities=11%  Similarity=0.030  Sum_probs=60.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..|+.++||||+||+++||++|+.||....      ......... .+.      .    .++......+.+
T Consensus       201 mAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~-~~~------~----~~p~~~s~~~~d  263 (311)
T 4aw0_A          201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN------EGLIFAKII-KLE------Y----DFPEKFFPKARD  263 (311)
T ss_dssp             CCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH-HTC------C----CCCTTCCHHHHH
T ss_pred             CCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHH-cCC------C----CCCcccCHHHHH
Confidence            79999999999999999999999999999999996321      111111111 111      1    112223347889


Q ss_pred             HHHHhhccCCCCCCCHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVV  100 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~  100 (214)
                      |+.+|++.||++||++.+++
T Consensus       264 li~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          264 LVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHHHHSCSSGGGSTTSGGGT
T ss_pred             HHHHHccCCHhHCcChHHHc
Confidence            99999999999999998863

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.38  E-value=4.4e-13  Score=110.26  Aligned_cols=101  Identities=22%  Similarity=0.145  Sum_probs=65.4

Q ss_pred             CcccccccC------CCCchhhHHHHHHHHHHHHcC----------CCCCCCCCCCCCCchhHHHHHHhhcCccccccCC
Q 028061            1 MAPEYALWG------YLTYKADVYSFGVVALEIVSG----------KNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDP   64 (214)
Q Consensus         1 mAPE~~~~~------~~t~ksDVySfGivl~Ei~tg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (214)
                      +|||++...      .++.++||||||++++||++|          ..||........ ....+. ....    ....++
T Consensus       218 ~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~-~~~~~~-~~~~----~~~~~~  291 (342)
T 1b6c_B          218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP-SVEEMR-KVVC----EQKLRP  291 (342)
T ss_dssp             CCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC-CHHHHH-HHHT----TSCCCC
T ss_pred             CCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcc-cHHHHH-HHHH----HHHhCC
Confidence            689988755      344789999999999999999          556643222111 111111 1111    111112


Q ss_pred             ccCCC-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           65 RLGSE-FNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        65 ~~~~~-~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      .+... ....+...+.+++.+||+.+|++||++.+|++.|+.+.
T Consensus       292 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~  335 (342)
T 1b6c_B          292 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  335 (342)
T ss_dssp             CCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            21111 12356678999999999999999999999999998753

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.38  E-value=5.2e-13  Score=110.72  Aligned_cols=101  Identities=13%  Similarity=0.025  Sum_probs=67.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++|||||||+++||++|+.||....... ..+.........  ......+....   ....+..+..
T Consensus       235 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~  308 (352)
T 2jii_A          235 ISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT-EDIMKQKQKFVD--KPGPFVGPCGH---WIRPSETLQK  308 (352)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-HHHHHHHHHHHH--SCCCEECTTSC---EECCCHHHHH
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH-HHHHHHHHhccC--Chhhhhhhccc---cCCCcHHHHH
Confidence            68999998899999999999999999999999986432111 001111111100  01111111100   0012347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      ++.+||+.+|.+||++.+|++.|+...
T Consensus       309 li~~~l~~dp~~Rps~~~l~~~L~~~~  335 (352)
T 2jii_A          309 YLKVVMALTYEEKPPYAMLRNNLEALL  335 (352)
T ss_dssp             HHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence            999999999999999999999988753

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.36  E-value=7e-14  Score=114.71  Aligned_cols=101  Identities=21%  Similarity=0.247  Sum_probs=68.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc------CccccccCCccCCCCCHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS------GTLMEFVDPRLGSEFNKVE   74 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~   74 (214)
                      +|||++.+..++.++||||||++++|+++|+.||......       ........      ..+...+........+..+
T Consensus       197 ~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (327)
T 3lxl_A          197 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE-------FLRMMGCERDVPALSRLLELLEEGQRLPAPPAC  269 (327)
T ss_dssp             SCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH-------HHHHCC----CCHHHHHHHHHHTTCCCCCCTTC
T ss_pred             cCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccch-------hhhhcccccccccHHHHHHHhhcccCCCCCCcc
Confidence            6899998889999999999999999999999987421100       00000000      0011111122222233344


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           75 AERMIKIALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      +..+.+++.+||+.+|.+||++.+|++.|+....
T Consensus       270 ~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          270 PAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            5689999999999999999999999999997644

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.36  E-value=7.1e-13  Score=110.94  Aligned_cols=101  Identities=20%  Similarity=0.200  Sum_probs=66.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHH---HHHhhc--------Cc-----------c
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWA---FHLHQS--------GT-----------L   58 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~---~~~~~~--------~~-----------~   58 (214)
                      ||||++.+..++.++|||||||+++||++|+.||...............   ......        +.           +
T Consensus       260 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  339 (397)
T 1wak_A          260 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL  339 (397)
T ss_dssp             CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSB
T ss_pred             cCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccc
Confidence            6999999889999999999999999999999999754433221111111   000000        00           0


Q ss_pred             ccccCCcc---------CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           59 MEFVDPRL---------GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        59 ~~~~~~~~---------~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+.+...         ....+......+.+|+.+||+.||++||++.+|++
T Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          340 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             SSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             ccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence            00000000         01235667778999999999999999999999985

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.36  E-value=2e-12  Score=105.64  Aligned_cols=104  Identities=8%  Similarity=0.060  Sum_probs=69.3

Q ss_pred             Ccccccc--------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc---Ccccccc-------
Q 028061            1 MAPEYAL--------WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS---GTLMEFV-------   62 (214)
Q Consensus         1 mAPE~~~--------~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------   62 (214)
                      +|||++.        ...++.++|||||||+++||++|+.||.........  ..........   ..+..+.       
T Consensus       182 ~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~  259 (319)
T 4euu_A          182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYKIITGKPSGAISGVQKAENGPI  259 (319)
T ss_dssp             CCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC--HHHHHHHHHHCCTTCCEEEECSTTCCE
T ss_pred             cCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh--HHHHHHHhcCCCcccchhhhcccCCcc
Confidence            5899876        478899999999999999999999998643322111  1111111110   0000000       


Q ss_pred             --CCc--cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           63 --DPR--LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        63 --~~~--~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                        ...  ............+..++.+||+.||++||++.++++.....
T Consensus       260 ~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          260 DWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             EEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             ccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence              001  11234566778899999999999999999999999987753

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.36  E-value=8.2e-14  Score=113.99  Aligned_cols=105  Identities=20%  Similarity=0.222  Sum_probs=67.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||....... .....+.........+...+........+..++..+.+
T Consensus       204 ~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  282 (318)
T 3lxp_A          204 YAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF-LELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYH  282 (318)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-HHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             eChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh-hhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHH
Confidence            68999988899999999999999999999999875211000 00000000000000011122222222233344558999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++.+||+.+|.+||++.++++.|+..
T Consensus       283 li~~~l~~dP~~Rps~~ell~~L~~l  308 (318)
T 3lxp_A          283 LMKNCWETEASFRPTFENLIPILKTV  308 (318)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            99999999999999999999998864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.35  E-value=1.8e-13  Score=111.00  Aligned_cols=87  Identities=20%  Similarity=0.285  Sum_probs=62.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++|||||||+++||++|+.||.....      ..........+      .+.  ...+...+..+.+
T Consensus       183 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~------~~~--~~~~~~~~~~~~~  248 (297)
T 3fxz_A          183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP------LRALYLIATNG------TPE--LQNPEKLSAIFRD  248 (297)
T ss_dssp             CCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHHC------SCC--CSCGGGSCHHHHH
T ss_pred             cChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCC------CCC--CCCccccCHHHHH
Confidence            689999999999999999999999999999999853211      11111111111      011  1112233457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.||++||++.++++
T Consensus       249 li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          249 FLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHccCChhHCcCHHHHhh
Confidence            999999999999999999985

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.34  E-value=3.3e-13  Score=109.89  Aligned_cols=87  Identities=21%  Similarity=0.380  Sum_probs=60.0

Q ss_pred             Cccccccc-----------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCC
Q 028061            1 MAPEYALW-----------GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSE   69 (214)
Q Consensus         1 mAPE~~~~-----------~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (214)
                      +|||++..           ..++.++||||||++++||++|+.||.....     .....         ...+++.....
T Consensus       195 ~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~---------~~~~~~~~~~~  260 (313)
T 3cek_A          195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKL---------HAIIDPNHEIE  260 (313)
T ss_dssp             CCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHH---------HHHHCTTSCCC
T ss_pred             CCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHH---------HHHHhcccccC
Confidence            68998865           4788999999999999999999999853211     01111         11122211111


Q ss_pred             CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           70 FNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        70 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+......+.+++.+||+.+|.+||++.++++
T Consensus       261 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          261 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            22222347889999999999999999999986

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.34  E-value=1.6e-12  Score=104.48  Aligned_cols=92  Identities=21%  Similarity=0.290  Sum_probs=62.1

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++.. ..++.++||||||++++|+++|+.++.....     ..... .....       .......    .+..+.
T Consensus       184 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-----~~~~~-~~~~~-------~~~~~~~----~~~~l~  246 (289)
T 4fvq_A          184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-----SQRKL-QFYED-------RHQLPAP----KAAELA  246 (289)
T ss_dssp             SCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHH-HHHHT-------TCCCCCC----SSCTTH
T ss_pred             cCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-----hHHHH-HHhhc-------cCCCCCC----CCHHHH
Confidence            68999887 7799999999999999999996554321110     00100 11000       0111111    123688


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      +++.+||+.+|.+||++.++++.|+.....
T Consensus       247 ~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          247 NLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence            999999999999999999999999987653

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.34  E-value=1.1e-12  Score=109.01  Aligned_cols=101  Identities=19%  Similarity=0.189  Sum_probs=63.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHh---------------------hcCccc
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLH---------------------QSGTLM   59 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~   59 (214)
                      ||||++.+..++.++|||||||+++||++|+.||...................                     ......
T Consensus       202 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  281 (373)
T 1q8y_A          202 RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLL  281 (373)
T ss_dssp             CCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CB
T ss_pred             cCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchh
Confidence            69999999899999999999999999999999996433221111111100000                     000000


Q ss_pred             cccCC-c---------cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           60 EFVDP-R---------LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        60 ~~~~~-~---------~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+.. .         .....+......+.+|+.+||+.||++||++.+|++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          282 RNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             SSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             cccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence            00000 0         011345667788999999999999999999999986

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.34  E-value=2.8e-13  Score=111.12  Aligned_cols=99  Identities=19%  Similarity=0.235  Sum_probs=66.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc-------CccccccCCccCCCCCHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS-------GTLMEFVDPRLGSEFNKV   73 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~   73 (214)
                      +|||.+....++.++||||||++++|+++|..|+....       ..+.......       ..+.+.+........+..
T Consensus       215 ~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (326)
T 2w1i_A          215 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP-------AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDG  287 (326)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH-------HHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTT
T ss_pred             ECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH-------HHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCc
Confidence            68999988889999999999999999999988864210       0000000000       001111111111122333


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           74 EAERMIKIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        74 ~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++..+..++.+||+.+|.+||++.+|++.|+.+
T Consensus       288 ~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l  320 (326)
T 2w1i_A          288 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  320 (326)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            455899999999999999999999999998864

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.33  E-value=2.9e-13  Score=110.46  Aligned_cols=82  Identities=22%  Similarity=0.318  Sum_probs=57.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+ .++.++|||||||+++|+++|..++...        ..  +.....+.    ..+.    .+......+.+
T Consensus       223 ~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~--------~~--~~~~~~~~----~~~~----~~~~~~~~l~~  283 (311)
T 3p1a_A          223 MAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG--------EG--WQQLRQGY----LPPE----FTAGLSSELRS  283 (311)
T ss_dssp             CCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH--------HH--HHHHTTTC----CCHH----HHTTSCHHHHH
T ss_pred             cCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc--------cH--HHHHhccC----CCcc----cccCCCHHHHH
Confidence            69998864 7999999999999999999997665310        00  11111111    1111    11122347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.++++
T Consensus       284 li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          284 VLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHcCCChhhCcCHHHHHh
Confidence            999999999999999999985

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.33  E-value=9.3e-13  Score=105.34  Aligned_cols=88  Identities=18%  Similarity=0.212  Sum_probs=64.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++||++|..|+...        .. ....        +.+......++    ..+..
T Consensus       188 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~-~~~~--------~~~~~~~~~~~----~~~~~  246 (284)
T 2a19_B          188 MSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SK-FFTD--------LRDGIISDIFD----KKEKT  246 (284)
T ss_dssp             SCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HH-HHHH--------HHTTCCCTTSC----HHHHH
T ss_pred             cChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HH-HHHH--------hhcccccccCC----HHHHH
Confidence            6899999889999999999999999999998876310        00 0111        11111112222    36789


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcCCCC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGSSNI  109 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~~~~  109 (214)
                      ++.+||+.+|.+||++.++++.|+.....
T Consensus       247 li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          247 LLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence            99999999999999999999999876543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.33  E-value=1.9e-13  Score=113.60  Aligned_cols=87  Identities=26%  Similarity=0.374  Sum_probs=60.4

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      ||||++.   .+.++.++|||||||+++||++|+.||....      ............      .+..   .+...+..
T Consensus       217 ~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~------~~~~~~~~~~~~------~~~~---~~~~~~~~  281 (348)
T 1u5q_A          217 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNE------SPAL---QSGHWSEY  281 (348)
T ss_dssp             CCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSC------CCCC---CCTTSCHH
T ss_pred             eCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhcC------CCCC---CCCCCCHH
Confidence            6899884   5689999999999999999999999985321      111111111111      1111   11122346


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      +.+++.+||+.+|++||++.++++.
T Consensus       282 l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          282 FRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHHcccChhhCcCHHHHhhC
Confidence            8899999999999999999999853

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.33  E-value=2.2e-13  Score=122.12  Aligned_cols=90  Identities=26%  Similarity=0.318  Sum_probs=65.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++||||||+++|||++ |..||.....      .+...... .+         .....+..++..+.
T Consensus       559 ~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~------~~~~~~i~-~~---------~~~~~~~~~~~~l~  622 (656)
T 2j0j_A          559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN------NDVIGRIE-NG---------ERLPMPPNCPPTLY  622 (656)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHH-HT---------CCCCCCTTCCHHHH
T ss_pred             eCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHH-cC---------CCCCCCccccHHHH
Confidence            69999998899999999999999999997 8888853211      11111111 11         01112223445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      .++.+||+.+|.+||++.+|++.|+..
T Consensus       623 ~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          623 SLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            999999999999999999999998864

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.33  E-value=8.4e-13  Score=110.54  Aligned_cols=80  Identities=10%  Similarity=0.029  Sum_probs=58.3

Q ss_pred             CcccccccC-----------CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCC
Q 028061            1 MAPEYALWG-----------YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSE   69 (214)
Q Consensus         1 mAPE~~~~~-----------~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (214)
                      ||||++...           .++.++|||||||+++||++|+.||........               ...+... . ..
T Consensus       269 ~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~---------------~~~~~~~-~-~~  331 (377)
T 3byv_A          269 EPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG---------------SEWIFRS-C-KN  331 (377)
T ss_dssp             CCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC---------------SGGGGSS-C-CC
T ss_pred             cChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc---------------hhhhhhh-c-cC
Confidence            689999877           899999999999999999999999853222110               1111110 0 12


Q ss_pred             CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           70 FNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        70 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .    +..+.+++.+||+.||++||++.++++
T Consensus       332 ~----~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          332 I----PQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             C----CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             C----CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            2    347889999999999999999999985

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.32  E-value=7.4e-13  Score=111.99  Aligned_cols=92  Identities=15%  Similarity=0.111  Sum_probs=63.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCc-hhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC-PLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....++.++|||||||+++||++|+.||.......... ....+    ..+..      .............+.
T Consensus       230 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i----~~~~~------~~~~~~~~~~s~~~~  299 (400)
T 1nxk_A          230 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQY------EFPNPEWSEVSEEVK  299 (400)
T ss_dssp             CCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH----HHTCC------CCCTTTTTTSCHHHH
T ss_pred             cCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH----HcCcc------cCCCcccccCCHHHH
Confidence            69999999999999999999999999999999996443222110 11100    01100      000011112344789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      +|+.+||+.||++||++.+|+..
T Consensus       300 ~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          300 MLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHCCCChhHCcCHHHHhcC
Confidence            99999999999999999999874

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.32  E-value=7.9e-13  Score=108.31  Aligned_cols=90  Identities=21%  Similarity=0.288  Sum_probs=52.0

Q ss_pred             Cccccc----ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHH
Q 028061            1 MAPEYA----LWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAE   76 (214)
Q Consensus         1 mAPE~~----~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (214)
                      +|||++    ....++.++||||||++++||++|+.||.......         ..  ...+.....+.+..........
T Consensus       192 ~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---------~~--~~~~~~~~~~~~~~~~~~~~~~  260 (327)
T 3aln_A          192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF---------DQ--LTQVVKGDPPQLSNSEEREFSP  260 (327)
T ss_dssp             --------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------------CCCCCSCCCCCCCCSSCCCCH
T ss_pred             cCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH---------HH--HHHHhcCCCCCCCCcccccCCH
Confidence            589998    45678999999999999999999999986422110         00  0001111111111111112344


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           77 RMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        77 ~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+..++.+||+.+|++||++.+|++
T Consensus       261 ~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          261 SFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHhhCChhhCcCHHHHHh
Confidence            7899999999999999999999975

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.32  E-value=3.2e-13  Score=109.21  Aligned_cols=97  Identities=18%  Similarity=0.210  Sum_probs=65.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--------CCCCCchhHHHHHHhhcCccccccCCccCCCCCH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP--------DSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNK   72 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (214)
                      +|||.+.+..++.++||||||++++|+++|+.|+....        ..........         +...+........+.
T Consensus       196 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~  266 (302)
T 4e5w_A          196 YAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR---------LVNTLKEGKRLPCPP  266 (302)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH---------HHHHHHTTCCCCCCT
T ss_pred             cCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH---------HHHHHhccCCCCCCC
Confidence            68999988899999999999999999999988753110        0000000000         011111111122233


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           73 VEAERMIKIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        73 ~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ..+..+.+++.+||+.+|.+||++.++++.|+..
T Consensus       267 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          267 NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            3445899999999999999999999999999853

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.31  E-value=2.2e-13  Score=110.38  Aligned_cols=86  Identities=28%  Similarity=0.442  Sum_probs=61.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||.....      ........ ..     ..+.+...    .+..+..
T Consensus       186 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~-~~-----~~~~~~~~----~~~~l~~  249 (303)
T 3a7i_A          186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP------MKVLFLIP-KN-----NPPTLEGN----YSKPLKE  249 (303)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHH-HS-----CCCCCCSS----CCHHHHH
T ss_pred             cCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH------HHHHHHhh-cC-----CCCCCccc----cCHHHHH
Confidence            689999988999999999999999999999999853211      11111110 00     11111122    2347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|.+||++.+|++.
T Consensus       250 li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          250 FVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHHCCSSGGGSCCHHHHTTC
T ss_pred             HHHHHcCCChhhCcCHHHHhhC
Confidence            9999999999999999999863

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.31  E-value=1.1e-12  Score=107.61  Aligned_cols=88  Identities=19%  Similarity=0.256  Sum_probs=61.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++||++|+.||.....      ........      ....+..  ......+..+.+
T Consensus       208 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~------~~~~~~~~------~~~~~~~--~~~~~~~~~l~~  273 (321)
T 2c30_A          208 MAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP------VQAMKRLR------DSPPPKL--KNSHKVSPVLRD  273 (321)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHH------HSSCCCC--TTGGGSCHHHHH
T ss_pred             cCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHh------cCCCCCc--CccccCCHHHHH
Confidence            689999999999999999999999999999999853211      11111111      1111111  111123347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|++||++.++++.
T Consensus       274 li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          274 FLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHccCChhhCcCHHHHhcC
Confidence            9999999999999999999863

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.30  E-value=7.4e-13  Score=109.09  Aligned_cols=88  Identities=17%  Similarity=0.052  Sum_probs=60.6

Q ss_pred             Cccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~--~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      +|||++..  ..++.++||||||++++||++|+.||.....      .+...........       ...+........+
T Consensus       241 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~~~~~~~~-------~~~~~~~~~~~~~  307 (345)
T 3hko_A          241 VAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVND------ADTISQVLNKKLC-------FENPNYNVLSPLA  307 (345)
T ss_dssp             CCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC-------TTSGGGGGSCHHH
T ss_pred             cCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCh------HHHHHHHHhcccc-------cCCcccccCCHHH
Confidence            68999875  6889999999999999999999999853221      1111111111100       0001111133478


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+++.+||+.+|.+||++.++++
T Consensus       308 ~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          308 RDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             HHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             HHHHHHHcCCChhHCCCHHHHhc
Confidence            99999999999999999999986

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.30  E-value=7.6e-12  Score=101.83  Aligned_cols=95  Identities=18%  Similarity=0.115  Sum_probs=62.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||.....       .......... ..   .+   ...+...+..+.+
T Consensus       202 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~-~~---~~---~~~~~~~~~~l~~  267 (309)
T 2h34_A          202 MAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-------SVMGAHINQA-IP---RP---STVRPGIPVAFDA  267 (309)
T ss_dssp             CCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-------HHHHHHHHSC-CC---CG---GGTSTTCCTHHHH
T ss_pred             cCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-------HHHHHHhccC-CC---Cc---cccCCCCCHHHHH
Confidence            689999988999999999999999999999999853211       1111111110 00   00   0111122337889


Q ss_pred             HHHHhhccCCCCCC-CHHHHHHHHhcCCCC
Q 028061           81 IALLCTNASPSLRP-TMSEVVSMLEGSSNI  109 (214)
Q Consensus        81 l~~~C~~~~p~~RP-s~~~v~~~L~~~~~~  109 (214)
                      ++.+||+.+|++|| ++.+++..|+.....
T Consensus       268 li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          268 VIARGMAKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             HHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence            99999999999999 999999999976543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.30  E-value=7.8e-13  Score=108.72  Aligned_cols=95  Identities=18%  Similarity=0.136  Sum_probs=53.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++||++|+.||.....................+..      ..........+..+.+
T Consensus       176 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~s~~~~~  249 (325)
T 3kn6_A          176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF------SFEGEAWKNVSQEAKD  249 (325)
T ss_dssp             --------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCC------CCCSHHHHTSCHHHHH
T ss_pred             cCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCC------CCCcccccCCCHHHHH
Confidence            6899999899999999999999999999999999643322111111111111111110      0000111123457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.||.+||++.+++.
T Consensus       250 li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          250 LIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             HHHHHHCCCTTTCCCTTTSTT
T ss_pred             HHHHHCCCChhHCCCHHHHhc
Confidence            999999999999999998864

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.30  E-value=1.1e-12  Score=115.79  Aligned_cols=88  Identities=20%  Similarity=0.142  Sum_probs=62.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..|+.++||||+||+++||++|+.||.....      .+...... ...      ..+...........+.+
T Consensus       323 ~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~------~~~~~~i~-~~~------~~~~~~~~~~~s~~~~d  389 (573)
T 3uto_A          323 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND------DETLRNVK-SCD------WNMDDSAFSGISEDGKD  389 (573)
T ss_dssp             CCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHH-TTC------CCCCSGGGTTSCHHHHH
T ss_pred             cCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHH-hCC------CCCCcccccCCCHHHHH
Confidence            799999999999999999999999999999999963211      11111110 110      01111111123347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.||.+||++.++++
T Consensus       390 li~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          390 FIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999987

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.29  E-value=7.8e-13  Score=105.75  Aligned_cols=84  Identities=19%  Similarity=0.232  Sum_probs=49.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+....++.++||||||++++|+++|+.||........               +..+.....  ..+......+.+
T Consensus       179 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---------------~~~~~~~~~--~~~~~~~~~~~~  241 (278)
T 3cok_A          179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT---------------LNKVVLADY--EMPSFLSIEAKD  241 (278)
T ss_dssp             -------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCSSCC--CCCTTSCHHHHH
T ss_pred             CCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH---------------HHHHhhccc--CCccccCHHHHH
Confidence            589999888899999999999999999999999864322110               011111111  112223347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.++++
T Consensus       242 li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          242 LIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             HHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHcccCHhhCCCHHHHhc
Confidence            999999999999999999975

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.29  E-value=7.7e-13  Score=109.17  Aligned_cols=92  Identities=14%  Similarity=0.131  Sum_probs=52.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||..........      ... .  .................+..+.+
T Consensus       196 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------~~~-~--~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
T 3fhr_A          196 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP------GMK-R--RIRLGQYGFPNPEWSEVSEDAKQ  266 (336)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------------CCCTTTSTTCCHHHHH
T ss_pred             cChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh------hHH-H--hhhccccccCchhhccCCHHHHH
Confidence            68999988899999999999999999999999985432221000      000 0  00000000111111223457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|.+||++.++++
T Consensus       267 li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          267 LIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHCCCChhHCcCHHHHhc
Confidence            999999999999999999997

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.29  E-value=1.4e-12  Score=107.91  Aligned_cols=84  Identities=20%  Similarity=0.162  Sum_probs=60.6

Q ss_pred             CcccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++.+..+ +.++|||||||+++|+++|+.||.......                +...+.... ...+...+..+.
T Consensus       174 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~----------------~~~~i~~~~-~~~p~~~s~~~~  236 (336)
T 3h4j_B          174 AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN----------------LFKKVNSCV-YVMPDFLSPGAQ  236 (336)
T ss_dssp             SCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT----------------CBCCCCSSC-CCCCTTSCHHHH
T ss_pred             CCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH----------------HHHHHHcCC-CCCcccCCHHHH
Confidence            68999987765 789999999999999999999996432211                111111111 111222344788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +++.+||+.||.+||++.++++
T Consensus       237 ~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          237 SLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHcCCChhHCcCHHHHHh
Confidence            9999999999999999999985

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.29  E-value=1.4e-12  Score=107.06  Aligned_cols=88  Identities=18%  Similarity=0.111  Sum_probs=60.0

Q ss_pred             CcccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....+ +.++|||||||+++||++|+.||........ ...    .. ...        .............+.
T Consensus       174 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~----~~-~~~--------~~~~~~~~~~~~~~~  239 (323)
T 3tki_A          174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYS----DW-KEK--------KTYLNPWKKIDSAPL  239 (323)
T ss_dssp             SCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHH----HH-HTT--------CTTSTTGGGSCHHHH
T ss_pred             cCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHH----HH-hcc--------cccCCccccCCHHHH
Confidence            68999887665 7899999999999999999999964322110 000    00 000        000011112334678


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      +|+.+||+.||.+||++.++++.
T Consensus       240 ~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          240 ALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHccCChhhCcCHHHHhhC
Confidence            99999999999999999999763

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.29  E-value=8.2e-13  Score=109.66  Aligned_cols=89  Identities=13%  Similarity=0.084  Sum_probs=62.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++|||||||+++||++|+.||......      ............ .     ...+.....+..+.+
T Consensus       217 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~i~~~~~-~-----~~~~~~~~~~~~~~~  284 (349)
T 2w4o_A          217 CAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD------QFMFRRILNCEY-Y-----FISPWWDEVSLNAKD  284 (349)
T ss_dssp             SCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH------HHHHHHHHTTCC-C-----CCTTTTTTSCHHHHH
T ss_pred             cCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc------HHHHHHHHhCCC-c-----cCCchhhhCCHHHHH
Confidence            6899999889999999999999999999999998532211      101111111100 0     011111223447889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.||++||++.++++
T Consensus       285 li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          285 LVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999986

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.28  E-value=2.7e-12  Score=107.79  Aligned_cols=100  Identities=20%  Similarity=0.335  Sum_probs=60.0

Q ss_pred             Cccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh----------------------cC
Q 028061            1 MAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ----------------------SG   56 (214)
Q Consensus         1 mAPE~~~~--~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~----------------------~~   56 (214)
                      +|||++..  ..++.++|||||||+++||++|+.||........  +.........                      ..
T Consensus       202 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (389)
T 3gni_B          202 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANS  279 (389)
T ss_dssp             SCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC------------------------------
T ss_pred             cCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHhcCCCCcccccccccccccccccccccccc
Confidence            68999987  5799999999999999999999999964332210  0000000000                      00


Q ss_pred             ccccccC---Cc------cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           57 TLMEFVD---PR------LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        57 ~~~~~~~---~~------~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      .+...+.   +.      .....+......+.+|+.+||+.||.+||++.++++.
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          280 GLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             --------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             ccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence            0000000   00      0001122234578999999999999999999999853

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.28  E-value=4.1e-12  Score=107.12  Aligned_cols=105  Identities=8%  Similarity=0.039  Sum_probs=69.7

Q ss_pred             Cccccccc--------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---ccccc---c----
Q 028061            1 MAPEYALW--------GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---TLMEF---V----   62 (214)
Q Consensus         1 mAPE~~~~--------~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~----   62 (214)
                      +|||++..        ..++.++|||||||+++|+++|+.||.........  ...........   .+...   .    
T Consensus       182 ~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~  259 (396)
T 4eut_A          182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYKIITGKPSGAISGVQKAENGPI  259 (396)
T ss_dssp             CCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC--HHHHHHHHHSCCTTCCEEEECSTTCCE
T ss_pred             cCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch--HHHHHHHhcCCCcccchhheeccCCCc
Confidence            58998764        57788999999999999999999999643322211  11111111110   00000   0    


Q ss_pred             ----CCccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           63 ----DPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        63 ----~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                          +..............+..++.+||+.||++||++.++++.++.+.
T Consensus       260 ~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il  308 (396)
T 4eut_A          260 DWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (396)
T ss_dssp             EEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred             ccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence                001112344667788999999999999999999999998887653

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.28  E-value=5.6e-13  Score=107.92  Aligned_cols=97  Identities=21%  Similarity=0.224  Sum_probs=67.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+.+..++.++||||||++++|+++|+.||.....      ........... ... ...    ..+...+..+.+
T Consensus       179 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~-~~~-~~~----~~~~~~~~~l~~  246 (294)
T 4eqm_A          179 FSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA------VSIAIKHIQDS-VPN-VTT----DVRKDIPQSLSN  246 (294)
T ss_dssp             CCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH------HHHHHHHHSSC-CCC-HHH----HSCTTSCHHHHH
T ss_pred             cCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhhcc-CCC-cch----hcccCCCHHHHH
Confidence            689999988999999999999999999999999953211      11111111110 000 000    111123347899


Q ss_pred             HHHHhhccCCCCCC-CHHHHHHHHhcCCCC
Q 028061           81 IALLCTNASPSLRP-TMSEVVSMLEGSSNI  109 (214)
Q Consensus        81 l~~~C~~~~p~~RP-s~~~v~~~L~~~~~~  109 (214)
                      ++.+||+.+|.+|| ++.++.+.|+.....
T Consensus       247 li~~~l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          247 VILRATEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             HHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             HHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence            99999999999998 899999999876543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.28  E-value=1.3e-12  Score=106.16  Aligned_cols=98  Identities=18%  Similarity=0.135  Sum_probs=61.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc---ccc-------ccCCccCC--
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT---LME-------FVDPRLGS--   68 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~--   68 (214)
                      ||||++....++.++|||||||+++||++|+.||.......   .............   ...       ...+....  
T Consensus       186 ~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (308)
T 3g33_A          186 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPV  262 (308)
T ss_dssp             CCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCH
T ss_pred             cCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChhhccchhhccccccCCCCCCcH
Confidence            69999999999999999999999999999999985422111   1111111100000   000       00000000  


Q ss_pred             -CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 -EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 -~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                       .........+.+++.+||+.||++||++.++++
T Consensus       263 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          263 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence             000112347889999999999999999999985

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.28  E-value=1.7e-12  Score=103.54  Aligned_cols=87  Identities=18%  Similarity=0.163  Sum_probs=59.3

Q ss_pred             CcccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....+ +.++||||||++++|+++|+.||....... ...     ..+.....  ..      .........+.
T Consensus       174 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~-----~~~~~~~~--~~------~~~~~~~~~~~  239 (276)
T 2yex_A          174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEY-----SDWKEKKT--YL------NPWKKIDSAPL  239 (276)
T ss_dssp             CCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-HHH-----HHHHTTCT--TS------TTGGGSCHHHH
T ss_pred             cChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-HHH-----HHhhhccc--cc------CchhhcCHHHH
Confidence            58999887664 789999999999999999999996432211 000     11111000  00      00112334788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +++.+||+.+|.+||++.++++
T Consensus       240 ~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          240 ALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHCCCCchhCCCHHHHhc
Confidence            9999999999999999999975

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.28  E-value=7.3e-13  Score=105.90  Aligned_cols=82  Identities=17%  Similarity=0.243  Sum_probs=57.4

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+... .++.++||||||++++|+++|..++...      .  .  ......+..     +    ..+...+..+.
T Consensus       197 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------~--~--~~~~~~~~~-----~----~~~~~~~~~~~  257 (289)
T 1x8b_A          197 LANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG------D--Q--WHEIRQGRL-----P----RIPQVLSQEFT  257 (289)
T ss_dssp             CCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS------H--H--HHHHHTTCC-----C----CCSSCCCHHHH
T ss_pred             cChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch------h--H--HHHHHcCCC-----C----CCCcccCHHHH
Confidence            689998765 6778999999999999999988765311      0  0  011111111     1    11222334789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +++.+||+.||++||++.++++
T Consensus       258 ~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          258 ELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhCCCcccCCCHHHHhh
Confidence            9999999999999999999975

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.28  E-value=3.7e-12  Score=102.79  Aligned_cols=91  Identities=27%  Similarity=0.417  Sum_probs=59.6

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC--ccc-cccCCccCCCCCHHHHH
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG--TLM-EFVDPRLGSEFNKVEAE   76 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~   76 (214)
                      +|||++.. ..++.++||||||++++|+++|+.||.......      .........  ... ...++.....    .+.
T Consensus       193 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  262 (303)
T 2vwi_A          193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK------VLMLTLQNDPPSLETGVQDKEMLKK----YGK  262 (303)
T ss_dssp             CCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG------HHHHHHTSSCCCTTC-----CCCCC----CCH
T ss_pred             cCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh------HHHHHhccCCCccccccccchhhhh----hhH
Confidence            58998875 568999999999999999999999986432211      000110000  000 0011111122    234


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           77 RMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        77 ~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+.+++.+||+.+|.+||++.++++
T Consensus       263 ~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          263 SFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhh
Confidence            7889999999999999999999986

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.28  E-value=8.4e-13  Score=106.76  Aligned_cols=86  Identities=20%  Similarity=0.120  Sum_probs=58.4

Q ss_pred             CcccccccCC---CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALWGY---LTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~~~---~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||.+....   ++.++|||||||+++|+++|+.||....      ......... ....    ..    +.....+..
T Consensus       204 ~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~-~~~~----~~----~~~~~~~~~  268 (298)
T 2zv2_A          204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER------IMCLHSKIK-SQAL----EF----PDQPDIAED  268 (298)
T ss_dssp             CCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH-HCCC----CC----CSSSCCCHH
T ss_pred             cChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc------HHHHHHHHh-cccC----CC----CCccccCHH
Confidence            6899987654   4789999999999999999999985321      111111111 1100    00    001112347


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +.+++.+||+.||++||++.++++
T Consensus       269 l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          269 LKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHhhcChhhCCCHHHHhc
Confidence            899999999999999999999864

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.28  E-value=1.6e-12  Score=106.83  Aligned_cols=89  Identities=16%  Similarity=0.194  Sum_probs=62.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++||++|+.||.....      ......... .      ...............+.+
T Consensus       200 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~-~------~~~~~~~~~~~~~~~~~~  266 (327)
T 3lm5_A          200 LAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN------QETYLNISQ-V------NVDYSEETFSSVSQLATD  266 (327)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH-T------CCCCCTTTTTTSCHHHHH
T ss_pred             cCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc------hHHHHHHHh-c------ccccCchhhcccCHHHHH
Confidence            689999989999999999999999999999999853211      111111100 0      001111111223447889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|.+||++.++++.
T Consensus       267 li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          267 FIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             HHHHHSCSSGGGSCCHHHHTTC
T ss_pred             HHHHHcCCChhhCcCHHHHhCC
Confidence            9999999999999999999753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.28  E-value=1.1e-12  Score=105.67  Aligned_cols=86  Identities=23%  Similarity=0.317  Sum_probs=58.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++. +.++.++||||||++++||++|+.||.....     ..... .....+....        ..+......+..
T Consensus       197 ~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~-~~~~~~~~~~--------~~~~~~~~~l~~  261 (290)
T 1t4h_A          197 MAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQIY-RRVTSGVKPA--------SFDKVAIPEVKE  261 (290)
T ss_dssp             CCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHHHH-HHHTTTCCCG--------GGGGCCCHHHHH
T ss_pred             CCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc-----HHHHH-HHHhccCCcc--------ccCCCCCHHHHH
Confidence            6899876 5699999999999999999999999853211     11111 1111111000        111112246899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|.+||++.+|++
T Consensus       262 li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          262 IIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHccCChhhCCCHHHHhh
Confidence            999999999999999999985

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.27  E-value=1.3e-12  Score=107.43  Aligned_cols=88  Identities=17%  Similarity=0.197  Sum_probs=60.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||.....      ......... .      ............+..+.+
T Consensus       184 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~  250 (326)
T 2y0a_A          184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANVSA-V------NYEFEDEYFSNTSALAKD  250 (326)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHH-T------CCCCCHHHHTTSCHHHHH
T ss_pred             CCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH------HHHHHHHHh-c------CCCcCccccccCCHHHHH
Confidence            699999888999999999999999999999999853211      111111100 0      000000000112346889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.++++
T Consensus       251 li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          251 FIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCChhhCCCHHHHhc
Confidence            999999999999999999986

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.27  E-value=5e-12  Score=105.98  Aligned_cols=36  Identities=25%  Similarity=0.323  Sum_probs=33.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      ||||++.+..++.++|||||||+++||++|+.||..
T Consensus       225 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  260 (382)
T 2vx3_A          225 RSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG  260 (382)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            699999998999999999999999999999999964

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.27  E-value=1.6e-12  Score=104.12  Aligned_cols=93  Identities=12%  Similarity=0.091  Sum_probs=63.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||.....      ....... ..+...      .........+..+.+
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~  240 (284)
T 3kk8_A          174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQI-KAGAYD------YPSPEWDTVTPEAKS  240 (284)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HHTCCC------CCTTTTTTSCHHHHH
T ss_pred             cCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch------hHHHHHH-Hhcccc------CCchhhcccCHHHHH
Confidence            689999988999999999999999999999999853211      1111111 111100      000111122347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH--HHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVS--MLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~--~L~~~  106 (214)
                      ++.+||+.+|++||++.++++  .++..
T Consensus       241 li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (284)
T 3kk8_A          241 LIDSMLTVNPKKRITADQALKVPWICNR  268 (284)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred             HHHHHcccChhhCCCHHHHhcCccccCC
Confidence            999999999999999999986  34443

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.27  E-value=6.4e-13  Score=108.18  Aligned_cols=99  Identities=18%  Similarity=0.160  Sum_probs=60.7

Q ss_pred             Cccccccc-----CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCH---
Q 028061            1 MAPEYALW-----GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNK---   72 (214)
Q Consensus         1 mAPE~~~~-----~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   72 (214)
                      +|||++..     ..++.++|||||||+++||++|+.||..........................+.....  ..+.   
T Consensus       188 ~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~  265 (316)
T 2ac3_A          188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY--EFPDKDW  265 (316)
T ss_dssp             CCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCC--CCCHHHH
T ss_pred             cChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCc--ccCchhc
Confidence            68998874     5688999999999999999999999965433221100000000000000000000000  1111   


Q ss_pred             -HHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           73 -VEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        73 -~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                       ..+..+.+++.+||+.||.+||++.++++
T Consensus       266 ~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          266 AHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence             12347899999999999999999999986

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.27  E-value=7.3e-13  Score=106.38  Aligned_cols=87  Identities=18%  Similarity=0.263  Sum_probs=58.0

Q ss_pred             Cccccc----ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHH
Q 028061            1 MAPEYA----LWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAE   76 (214)
Q Consensus         1 mAPE~~----~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (214)
                      +|||++    ....++.++||||||++++|+++|+.||......     ...........      .+..   .....+.
T Consensus       176 ~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~------~~~~---~~~~~~~  241 (290)
T 3fme_A          176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-----FQQLKQVVEEP------SPQL---PADKFSA  241 (290)
T ss_dssp             SCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-----HHHHHHHHHSC------CCCC---CTTTSCH
T ss_pred             cChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-----HHHHHHHhccC------CCCc---ccccCCH
Confidence            689996    4567899999999999999999999998532111     11111111110      0111   1112334


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           77 RMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        77 ~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+.+++.+||+.+|++||++.++++
T Consensus       242 ~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          242 EFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHhhcChhhCcCHHHHHh
Confidence            7899999999999999999999975

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.26  E-value=2.6e-12  Score=106.09  Aligned_cols=79  Identities=18%  Similarity=0.233  Sum_probs=59.1

Q ss_pred             CcccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....+ +.++|||||||+++|+++|+.||....                     +.......  .+......+.
T Consensus       196 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---------------------~~~~~~~~--~~~~~~~~l~  252 (335)
T 3dls_A          196 CAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE---------------------ETVEAAIH--PPYLVSKELM  252 (335)
T ss_dssp             CCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG---------------------GGTTTCCC--CSSCCCHHHH
T ss_pred             cChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH---------------------HHHhhccC--CCcccCHHHH
Confidence            68999987766 889999999999999999999985311                     01111110  0111234789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      .++.+||+.+|++||++.++++.
T Consensus       253 ~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          253 SLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             HHHHHHccCChhhCcCHHHHhcC
Confidence            99999999999999999999874

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.26  E-value=5.8e-12  Score=102.77  Aligned_cols=98  Identities=15%  Similarity=0.167  Sum_probs=61.2

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc---ccccc------CCc--cCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT---LMEFV------DPR--LGS   68 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~~~--~~~   68 (214)
                      +|||++.+ ..++.++|||||||+++|+++|+.||.......   .............   .....      ...  ...
T Consensus       186 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (311)
T 3niz_A          186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD---QLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFE  262 (311)
T ss_dssp             CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT---HHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCC
T ss_pred             CCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHHCCCChHHhhhhhccchhhhccccccc
Confidence            68999875 568999999999999999999999996543322   1111111100000   00000      000  000


Q ss_pred             CCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 EFN-----KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+     ......+.+|+.+||+.||.+||++.++++
T Consensus       263 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          263 KKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             CCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            000     112346889999999999999999999986

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.26  E-value=1.6e-12  Score=107.91  Aligned_cols=36  Identities=31%  Similarity=0.331  Sum_probs=33.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      +|||++.+..++.++|||||||+++||++|+.||..
T Consensus       226 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          226 RAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence            699999999999999999999999999999999964

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.26  E-value=3.4e-12  Score=108.30  Aligned_cols=80  Identities=9%  Similarity=-0.025  Sum_probs=58.2

Q ss_pred             Cccccc----------ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCC
Q 028061            1 MAPEYA----------LWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEF   70 (214)
Q Consensus         1 mAPE~~----------~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (214)
                      ||||++          ....++.++|||||||++|||++|+.||.......               ....++...  ...
T Consensus       274 ~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~---------------~~~~~~~~~--~~~  336 (413)
T 3dzo_A          274 APPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG---------------GSEWIFRSC--KNI  336 (413)
T ss_dssp             CCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGS---------------CSGGGGSSC--CCC
T ss_pred             eCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhh---------------hHHHHHhhc--ccC
Confidence            699998          55578899999999999999999999996322111               111111111  122


Q ss_pred             CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           71 NKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        71 ~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                          +..+..|+.+||+.+|++||++.++++
T Consensus       337 ----~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          337 ----PQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             ----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                247899999999999999999877753

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.26  E-value=7.2e-13  Score=106.66  Aligned_cols=87  Identities=23%  Similarity=0.336  Sum_probs=59.3

Q ss_pred             CcccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWG--YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~--~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      +|||++..+  .++.++||||||++++||++|+.||......     ........     .....+.    .+...+..+
T Consensus       190 ~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~-----~~~~~~~----~~~~~~~~~  255 (295)
T 2clq_A          190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP-----QAAMFKVG-----MFKVHPE----IPESMSAEA  255 (295)
T ss_dssp             CCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH-----HHHHHHHH-----HHCCCCC----CCTTSCHHH
T ss_pred             cChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch-----hHHHHhhc-----ccccccc----ccccCCHHH
Confidence            589988764  3889999999999999999999998532111     00000000     0001111    222234478


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+++.+||+.+|++||++.+++.
T Consensus       256 ~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          256 KAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHccCChhhCCCHHHHhc
Confidence            89999999999999999999975

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.26  E-value=8.1e-13  Score=108.03  Aligned_cols=86  Identities=23%  Similarity=0.402  Sum_probs=57.6

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      +|||++.     ...++.++||||||++++||++|+.||.....      ......... ..     .+...   ....+
T Consensus       196 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~-~~-----~~~~~---~~~~~  260 (326)
T 2x7f_A          196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP------MRALFLIPR-NP-----APRLK---SKKWS  260 (326)
T ss_dssp             CCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHH-SC-----CCCCS---CSCSC
T ss_pred             cChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH------HHHHHHhhc-Cc-----cccCC---ccccC
Confidence            6899886     56789999999999999999999999853211      111111111 00     01110   11123


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+..++.+||..+|.+||++.++++
T Consensus       261 ~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          261 KKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHhh
Confidence            47899999999999999999999986

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.26  E-value=1.4e-12  Score=106.64  Aligned_cols=98  Identities=20%  Similarity=0.165  Sum_probs=63.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc-----------Ccc-----------
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS-----------GTL-----------   58 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~-----------   58 (214)
                      +|||++.+..++.++||||||++++|+++|+.||.......   ...........           ...           
T Consensus       201 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  277 (339)
T 1z57_A          201 RAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE---HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEH  277 (339)
T ss_dssp             CCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH---HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTT
T ss_pred             cChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCCHHHHhhccchhHHhhcccccccc
Confidence            68999998899999999999999999999999986432111   00000000000           000           


Q ss_pred             -------ccccCCcc-CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           59 -------MEFVDPRL-GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        59 -------~~~~~~~~-~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                             .....+.. ...........+.+++.+||+.||.+||++.+|++
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          278 SSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             SHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence                   00000000 01122345678999999999999999999999975

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.25  E-value=2.7e-12  Score=105.00  Aligned_cols=88  Identities=19%  Similarity=0.168  Sum_probs=60.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||.....      ........ ....  ..++...    ...+..+.+
T Consensus       185 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~-~~~~--~~~~~~~----~~~~~~~~~  251 (321)
T 2a2a_A          185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANIT-SVSY--DFDEEFF----SHTSELAKD  251 (321)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHH-TTCC--CCCHHHH----TTCCHHHHH
T ss_pred             cCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHH-hccc--ccChhhh----cccCHHHHH
Confidence            689999988999999999999999999999999853211      11111110 0000  0000000    112346889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.++++
T Consensus       252 li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          252 FIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HHHTTSCSSTTTSCCHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHhc
Confidence            999999999999999999986

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.25  E-value=5.4e-12  Score=102.26  Aligned_cols=93  Identities=19%  Similarity=0.224  Sum_probs=64.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||.....      ....... ..+.. .     .........+..+.+
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i-~~~~~-~-----~~~~~~~~~~~~~~~  240 (304)
T 2jam_A          174 VAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE------SKLFEKI-KEGYY-E-----FESPFWDDISESAKD  240 (304)
T ss_dssp             CCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHH-HHCCC-C-----CCTTTTTTSCHHHHH
T ss_pred             cChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHH-HcCCC-C-----CCccccccCCHHHHH
Confidence            689999988999999999999999999999999853211      1111111 11110 0     011111223447899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH--HHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVS--MLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~--~L~~~  106 (214)
                      ++.+||+.+|.+||++.++++  .+++.
T Consensus       241 li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          241 FICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             HHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             HHHHHcCCChhHCcCHHHHhcCccccCC
Confidence            999999999999999999986  45543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.25  E-value=2e-12  Score=103.58  Aligned_cols=88  Identities=18%  Similarity=0.223  Sum_probs=60.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||.....      ....... ...      ............+..+.+
T Consensus       178 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~  244 (283)
T 3bhy_A          178 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK------QETLTNI-SAV------NYDFDEEYFSNTSELAKD  244 (283)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHH-HTT------CCCCCHHHHTTCCHHHHH
T ss_pred             cCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch------HHHHHHh-Hhc------ccCCcchhcccCCHHHHH
Confidence            689999888999999999999999999999999853211      1111111 000      000000000112347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|.+||++.+++.
T Consensus       245 li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          245 FIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCCHhHCcCHHHHHh
Confidence            999999999999999999986

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.25  E-value=9.7e-13  Score=109.05  Aligned_cols=91  Identities=20%  Similarity=0.293  Sum_probs=62.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||.......   ........ ..+...      ............+.+
T Consensus       187 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~~~~i-~~~~~~------~~~~~~~~~s~~~~~  256 (342)
T 2qr7_A          187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT---PEEILARI-GSGKFS------LSGGYWNSVSDTAKD  256 (342)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC---HHHHHHHH-HHCCCC------CCSTTTTTSCHHHHH
T ss_pred             cCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC---HHHHHHHH-ccCCcc------cCccccccCCHHHHH
Confidence            68999988889999999999999999999999996422211   11111111 111110      111111223447889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||..||++||++.++++
T Consensus       257 li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          257 LVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHCCCChhHCcCHHHHhc
Confidence            999999999999999999975

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.25  E-value=1.6e-12  Score=108.38  Aligned_cols=91  Identities=18%  Similarity=0.135  Sum_probs=59.6

Q ss_pred             CcccccccCCCCch-hhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYK-ADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~k-sDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++.+..+..+ +|||||||+++||++|+.||.......  .........         .......+........+.
T Consensus       184 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~---------~~~~~~~~~~~~~s~~~~  252 (361)
T 3uc3_A          184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRI---------LSVKYSIPDDIRISPECC  252 (361)
T ss_dssp             SCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHH---------HTTCCCCCTTSCCCHHHH
T ss_pred             CChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHH---------hcCCCCCCCcCCCCHHHH
Confidence            68999988777655 899999999999999999996432221  111111111         111110001111234788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      .|+.+||+.+|.+||++.++++.
T Consensus       253 ~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          253 HLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHccCChhHCcCHHHHHhC
Confidence            99999999999999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.25  E-value=5.5e-12  Score=100.93  Aligned_cols=85  Identities=22%  Similarity=0.268  Sum_probs=61.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+.+..++.++||||||++++|+++|+.||.....      ........ .      ...    ..+......+.+
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~-~------~~~----~~~~~~~~~~~~  236 (279)
T 3fdn_A          174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------QETYKRIS-R------VEF----TFPDFVTEGARD  236 (279)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHH-H------TCC----CCCTTSCHHHHH
T ss_pred             cCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH------HHHHHHHH-h------CCC----CCCCcCCHHHHH
Confidence            689999988999999999999999999999999853211      11110110 0      011    112223347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|.+||++.+|++.
T Consensus       237 li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          237 LISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             HHHHHCCSSGGGSCCHHHHHHC
T ss_pred             HHHHHhccChhhCCCHHHHhhC
Confidence            9999999999999999999863

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.25  E-value=9.6e-13  Score=108.48  Aligned_cols=84  Identities=18%  Similarity=0.156  Sum_probs=59.8

Q ss_pred             CcccccccCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLT-YKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t-~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++.+..+. .++|||||||+++||++|+.||....      ......... .+.        .  ..+...+..+.
T Consensus       180 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~-~~~--------~--~~p~~~s~~~~  242 (328)
T 3fe3_A          180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN------LKELRERVL-RGK--------Y--RIPFYMSTDCE  242 (328)
T ss_dssp             CCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH-HCC--------C--CCCTTSCHHHH
T ss_pred             eCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHH-hCC--------C--CCCCCCCHHHH
Confidence            689999877764 89999999999999999999996321      111111111 110        0  11222334788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +++.+||+.||.+||++.++++
T Consensus       243 ~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          243 NLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             HHHHHHCCSSTTTSCCHHHHTT
T ss_pred             HHHHHHCCCChhHCcCHHHHhc
Confidence            9999999999999999999986

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.25  E-value=1.1e-12  Score=112.03  Aligned_cols=36  Identities=25%  Similarity=0.348  Sum_probs=33.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      ||||++.+..++.++|||||||+++||++|+.||..
T Consensus       266 ~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~  301 (429)
T 3kvw_A          266 RAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG  301 (429)
T ss_dssp             CCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence            699999999999999999999999999999999864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.25  E-value=2.6e-12  Score=108.35  Aligned_cols=89  Identities=16%  Similarity=0.159  Sum_probs=62.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||.....      ........ ....  ..+...    ....+..+.+
T Consensus       217 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------~~~~~~i~-~~~~--~~~~~~----~~~~s~~~~~  283 (387)
T 1kob_A          217 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD------LETLQNVK-RCDW--EFDEDA----FSSVSPEAKD  283 (387)
T ss_dssp             CCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHH-HCCC--CCCSST----TTTSCHHHHH
T ss_pred             cCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH------HHHHHHHH-hCCC--CCCccc----cccCCHHHHH
Confidence            699999988999999999999999999999999963211      11111111 0000  011111    1123347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.||.+||++.++++.
T Consensus       284 li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          284 FIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHcCCChhHCcCHHHHhhC
Confidence            9999999999999999999863

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.25  E-value=5.1e-12  Score=107.88  Aligned_cols=89  Identities=21%  Similarity=0.240  Sum_probs=61.8

Q ss_pred             Cccccccc-------CCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCH
Q 028061            1 MAPEYALW-------GYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNK   72 (214)
Q Consensus         1 mAPE~~~~-------~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (214)
                      ||||++.+       ..++.++|||||||+++||++ |+.||......    ..    .... +.. .  .+........
T Consensus       199 ~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~----~~----~i~~-~~~-~--~~~~~~~~~~  266 (434)
T 2rio_A          199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR----ES----NIIR-GIF-S--LDEMKCLHDR  266 (434)
T ss_dssp             SCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH----HH----HHHH-TCC-C--CCCCTTCCCH
T ss_pred             cCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh----HH----HHhc-CCC-C--cccccccccc
Confidence            68999865       678999999999999999999 88898532111    00    0000 000 0  0111112234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           73 VEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        73 ~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .....+.+++.+||+.+|.+||++.+|++
T Consensus       267 ~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          267 SLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            56678999999999999999999999975

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.25  E-value=1.4e-12  Score=104.64  Aligned_cols=84  Identities=17%  Similarity=0.184  Sum_probs=61.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||++++|+++|+.||.....      ........ .      .+.    ..+...+..+.+
T Consensus       179 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~-~------~~~----~~~~~~~~~~~~  241 (284)
T 2vgo_A          179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH------TETHRRIV-N------VDL----KFPPFLSDGSKD  241 (284)
T ss_dssp             CCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHH-T------TCC----CCCTTSCHHHHH
T ss_pred             CCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH------hHHHHHHh-c------ccc----CCCCcCCHHHHH
Confidence            689999988999999999999999999999999853211      11111110 0      011    112223347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|.+||++.++++
T Consensus       242 li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          242 LISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHhhcCHhhCCCHHHHhh
Confidence            999999999999999999985

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.25  E-value=2e-12  Score=110.86  Aligned_cols=88  Identities=15%  Similarity=0.117  Sum_probs=61.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++||||+||+++||++|..||.....      .... .....+.. .     ...+.....+..+.+
T Consensus       180 ~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~------~~~~-~~i~~~~~-~-----~~~~~~~~~s~~~~~  246 (444)
T 3soa_A          180 LSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ------HRLY-QQIKAGAY-D-----FPSPEWDTVTPEAKD  246 (444)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHH-HHHHHTCC-C-----CCTTTTTTSCHHHHH
T ss_pred             CCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH------HHHH-HHHHhCCC-C-----CCccccccCCHHHHH
Confidence            699999988999999999999999999999999853211      1111 11111110 0     001111123347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.||.+||++.++++
T Consensus       247 li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          247 LINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHcCCChhHCCCHHHHhc
Confidence            999999999999999999986

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.24  E-value=5.5e-12  Score=101.54  Aligned_cols=98  Identities=20%  Similarity=0.261  Sum_probs=60.2

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc------cc--cccCCccC----
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT------LM--EFVDPRLG----   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~----   67 (214)
                      +|||++.+ ..++.++|||||||+++||++|+.||.......   .............      ..  ...++...    
T Consensus       167 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (288)
T 1ob3_A          167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD---QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP  243 (288)
T ss_dssp             CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCC
T ss_pred             cCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHHCCCChhhchhhhcccccccccccccC
Confidence            68999875 468999999999999999999999986422110   0000111000000      00  00011100    


Q ss_pred             ---CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 ---SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ---~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                         ..........+.+++.+||+.||++||++.++++
T Consensus       244 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             CCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence               0011123347889999999999999999999975

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.24  E-value=8.1e-12  Score=105.66  Aligned_cols=96  Identities=16%  Similarity=0.131  Sum_probs=60.2

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc-----------cc---cccCCc
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT-----------LM---EFVDPR   65 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------~~---~~~~~~   65 (214)
                      ||||++.+. .++.++||||+||+++||++|+.||.......   ....+........           ..   ..+.+.
T Consensus       229 ~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~---~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~  305 (398)
T 4b99_A          229 RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH---QLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPR  305 (398)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH---HHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCC
T ss_pred             cCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH---HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCc
Confidence            799998764 57999999999999999999999996422111   1111111100000           00   000000


Q ss_pred             cCCCCCH-----HHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           66 LGSEFNK-----VEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        66 ~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .  ..+.     .....+.+|+.+||..||.+|||+.++++
T Consensus       306 ~--~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          306 Q--PVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             C--CCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             C--CCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            0  1111     12346789999999999999999999976

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.24  E-value=1.4e-12  Score=106.57  Aligned_cols=83  Identities=14%  Similarity=0.200  Sum_probs=58.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||++++||++|..|+..        ....         ....... ..+.........+..
T Consensus       243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--------~~~~---------~~~~~~~-~~~~~~~~~~~~~~~  304 (332)
T 3qd2_B          243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--------RVRI---------ITDVRNL-KFPLLFTQKYPQEHM  304 (332)
T ss_dssp             SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--------HHHH---------HHHHHTT-CCCHHHHHHCHHHHH
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--------HHHH---------HHHhhcc-CCCcccccCChhHHH
Confidence            689999988999999999999999999998765410        0000         0000110 111112233456789


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.++++
T Consensus       305 li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          305 MVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHHHHHCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCCCCcCCCHHHHhh
Confidence            999999999999999999986

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.24  E-value=8.3e-13  Score=108.41  Aligned_cols=88  Identities=17%  Similarity=0.145  Sum_probs=61.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++|||||||+++||++|..||.....      ......... +...  .+...    ....+..+.+
T Consensus       170 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~-~~~~--~~~~~----~~~~s~~~~~  236 (321)
T 1tki_A          170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN------QQIIENIMN-AEYT--FDEEA----FKEISIEAMD  236 (321)
T ss_dssp             SCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHH-TCCC--CCHHH----HTTSCHHHHH
T ss_pred             cCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHc-CCCC--CChhh----hccCCHHHHH
Confidence            689999888899999999999999999999999953211      111111110 0000  00000    0112347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.||.+||++.++++
T Consensus       237 li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          237 FVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999999987

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.24  E-value=7.1e-12  Score=104.74  Aligned_cols=35  Identities=31%  Similarity=0.363  Sum_probs=32.0

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCC
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMS   35 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~   35 (214)
                      ||||++.+. .++.++||||+||+++||++|+.||.
T Consensus       213 ~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~  248 (361)
T 4f9c_A          213 RAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY  248 (361)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred             cCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence            799998765 58999999999999999999999985

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.24  E-value=6e-12  Score=101.25  Aligned_cols=86  Identities=19%  Similarity=0.193  Sum_probs=57.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+. +.++.++||||||++++|+++|+.||.....      ..............    ......    ....+.+
T Consensus       193 ~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~----~~~~~~----~~~~~~~  257 (285)
T 3is5_A          193 MAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL------EEVQQKATYKEPNY----AVECRP----LTPQAVD  257 (285)
T ss_dssp             CCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCC----CC--CC----CCHHHHH
T ss_pred             CChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH------HHHHhhhccCCccc----ccccCc----CCHHHHH
Confidence            6899875 5789999999999999999999999853211      11111110000000    000011    2236889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.||++||++.+|++
T Consensus       258 li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          258 LLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999985

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.23  E-value=2.6e-12  Score=105.83  Aligned_cols=98  Identities=16%  Similarity=0.112  Sum_probs=62.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc--------Ccccc------------
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS--------GTLME------------   60 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~~------------   60 (214)
                      +|||++.+..++.++|||||||+++||++|+.||.......   ...........        .....            
T Consensus       206 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  282 (355)
T 2eu9_A          206 RPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE---HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDEN  282 (355)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTT
T ss_pred             cCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCcHHHhhhccchhhhcccccccccc
Confidence            69999998999999999999999999999999996422111   00000000000        00000            


Q ss_pred             ---------ccCCc-cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           61 ---------FVDPR-LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        61 ---------~~~~~-~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                               ...+. ............+.+|+.+||+.||++||++.++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          283 SSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             SHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                     00000 000112234557899999999999999999999974

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.23  E-value=3.7e-12  Score=106.77  Aligned_cols=88  Identities=19%  Similarity=0.238  Sum_probs=61.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||.....      ........... . . ...    .........+.+
T Consensus       255 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~~~~-~-~-~~~----~~~~~~~~~~~~  321 (373)
T 2x4f_A          255 LAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND------AETLNNILACR-W-D-LED----EEFQDISEEAKE  321 (373)
T ss_dssp             CCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTC-C-C-SCS----GGGTTSCHHHHH
T ss_pred             eChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcc-C-C-CCh----hhhccCCHHHHH
Confidence            699999989999999999999999999999999853211      11111111100 0 0 000    011122347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.+|.+||++.++++
T Consensus       322 li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          322 FISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCChhhCCCHHHHhc
Confidence            999999999999999999986

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.23  E-value=1.4e-12  Score=108.88  Aligned_cols=88  Identities=13%  Similarity=0.100  Sum_probs=61.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||.....      ....... ..+...      .........+..+.+
T Consensus       197 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~------~~~~~~i-~~~~~~------~~~~~~~~~~~~~~~  263 (362)
T 2bdw_A          197 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQI-KAGAYD------YPSPEWDTVTPEAKS  263 (362)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HHTCCC------CCTTGGGGSCHHHHH
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHH-HhCCCC------CCcccccCCCHHHHH
Confidence            699999988999999999999999999999999853211      1111111 111100      000111123447889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.||++||++.++++
T Consensus       264 li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          264 LIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             HHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHcCCChhhCcCHHHHhc
Confidence            999999999999999999975

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.23  E-value=1.5e-12  Score=108.19  Aligned_cols=87  Identities=23%  Similarity=0.196  Sum_probs=60.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||....       .. .......+...  ..+....    ..+..+.+
T Consensus       200 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~-~~~~i~~~~~~--~~~~~~~----~~s~~~~~  265 (351)
T 3c0i_A          200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-------ER-LFEGIIKGKYK--MNPRQWS----HISESAKD  265 (351)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------HH-HHHHHHHTCCC--CCHHHHT----TSCHHHHH
T ss_pred             cCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------HH-HHHHHHcCCCC--CCccccc----cCCHHHHH
Confidence            69999998899999999999999999999999995321       01 11110011000  0000001    12347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.||++||++.++++
T Consensus       266 li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          266 LVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHCCCChhHCcCHHHHhc
Confidence            999999999999999999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.23  E-value=4.7e-12  Score=105.82  Aligned_cols=98  Identities=16%  Similarity=0.141  Sum_probs=62.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHH-------------------Hhhc-Cc---
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFH-------------------LHQS-GT---   57 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~-------------------~~~~-~~---   57 (214)
                      +|||++.+..++.++|||||||+++||++|+.||.......   ....+..                   .... ..   
T Consensus       193 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (371)
T 2xrw_A          193 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID---QWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG  269 (371)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCC
T ss_pred             cCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccc
Confidence            69999998899999999999999999999999996422100   0000000                   0000 00   


Q ss_pred             --cccccCCccCCC---CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           58 --LMEFVDPRLGSE---FNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        58 --~~~~~~~~~~~~---~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                        +.........+.   ........+.+|+.+||+.||.+||++.++++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          270 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             CCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence              000000000000   11223567899999999999999999999986

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.23  E-value=3.1e-12  Score=105.90  Aligned_cols=84  Identities=17%  Similarity=0.126  Sum_probs=60.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.....      ........ .+.      .    ..+......+..
T Consensus       172 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~-~~~------~----~~p~~~s~~~~~  234 (337)
T 1o6l_A          172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------ERLFELIL-MEE------I----RFPRTLSPEAKS  234 (337)
T ss_dssp             CCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-HCC------C----CCCTTSCHHHHH
T ss_pred             CChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH------HHHHHHHH-cCC------C----CCCCCCCHHHHH
Confidence            699999999999999999999999999999999853211      11111111 010      1    112223447899


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      ++.+||+.+|.+||     ++.+|++
T Consensus       235 li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          235 LLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            99999999999999     8888875

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.23  E-value=6.5e-12  Score=102.10  Aligned_cols=88  Identities=19%  Similarity=0.225  Sum_probs=57.2

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      +|||++.     ...++.++||||||++++||++|+.||.....     ............      .+...  .....+
T Consensus       191 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~------~~~~~--~~~~~~  257 (318)
T 2dyl_A          191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-----DFEVLTKVLQEE------PPLLP--GHMGFS  257 (318)
T ss_dssp             CCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHHSC------CCCCC--SSSCCC
T ss_pred             cChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-----cHHHHHHHhccC------CCCCC--ccCCCC
Confidence            5899984     45788999999999999999999999853211     111111111110      01110  001123


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+..++.+||+.+|.+||++.+|++
T Consensus       258 ~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          258 GDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhh
Confidence            47889999999999999999999975

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.23  E-value=8.1e-12  Score=102.08  Aligned_cols=98  Identities=15%  Similarity=0.257  Sum_probs=59.9

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc--Ccccc------ccCCcc----C
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS--GTLME------FVDPRL----G   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~----~   67 (214)
                      +|||++.+ ..++.++|||||||+++||++|+.||.......   ....+......  .....      ...+..    .
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (317)
T 2pmi_A          175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE---QLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPP  251 (317)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCC
T ss_pred             cCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChhHhhhhhhhhhcccccccccc
Confidence            68999875 468999999999999999999999996422110   11111110000  00000      000000    0


Q ss_pred             C--------CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 S--------EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ~--------~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .        .........+.+++.+||+.||++||++.++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          252 RDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             CCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            0        000112347899999999999999999999975

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.23  E-value=4.2e-12  Score=106.03  Aligned_cols=88  Identities=19%  Similarity=0.214  Sum_probs=60.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++|||||||+++||++|..||.....      ....... ..+..      .............+.+
T Consensus       185 ~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~------~~~~~~i-~~~~~------~~~~~~~~~~s~~~~~  251 (361)
T 2yab_A          185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANI-TAVSY------DFDEEFFSQTSELAKD  251 (361)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHH-HTTCC------CCCHHHHTTSCHHHHH
T ss_pred             ECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHH-HhcCC------CCCchhccCCCHHHHH
Confidence            699999988999999999999999999999999953211      1111111 01100      0000000112346889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||..||.+||++.++++
T Consensus       252 li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          252 FIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHCCCChhHCcCHHHHhc
Confidence            999999999999999999975

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.23  E-value=3.3e-12  Score=103.83  Aligned_cols=87  Identities=22%  Similarity=0.339  Sum_probs=61.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++||++|+.||.....      ..........      ..+..  ..+...+..+.+
T Consensus       192 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~------~~~~~--~~~~~~~~~l~~  257 (314)
T 3com_A          192 MAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP------MRAIFMIPTN------PPPTF--RKPELWSDNFTD  257 (314)
T ss_dssp             CCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHS------CCCCC--SSGGGSCHHHHH
T ss_pred             cChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcC------CCccc--CCcccCCHHHHH
Confidence            589999888999999999999999999999999853211      1111111100      00111  111223447899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|.+||++.++++
T Consensus       258 li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          258 FVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHccCChhhCcCHHHHHh
Confidence            999999999999999999975

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.22  E-value=5.9e-12  Score=103.21  Aligned_cols=103  Identities=12%  Similarity=0.152  Sum_probs=62.7

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---ccccccC---------CccC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---TLMEFVD---------PRLG   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---------~~~~   67 (214)
                      +|||++.+ ..++.++|||||||+++||++|+.||.......   ....+.......   .......         +...
T Consensus       167 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (324)
T 3mtl_A          167 RPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYR  243 (324)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCC
T ss_pred             cChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhcchhhccccccccc
Confidence            68998876 578999999999999999999999996422111   111111110000   0000000         0000


Q ss_pred             CC----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH--HHhcC
Q 028061           68 SE----FNKVEAERMIKIALLCTNASPSLRPTMSEVVS--MLEGS  106 (214)
Q Consensus        68 ~~----~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~~  106 (214)
                      ..    ........+.+|+.+||+.||.+||++.++++  .+...
T Consensus       244 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  288 (324)
T 3mtl_A          244 AEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL  288 (324)
T ss_dssp             CCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             chhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhc
Confidence            00    00112346889999999999999999999986  34443

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.22  E-value=3.3e-12  Score=104.30  Aligned_cols=98  Identities=18%  Similarity=0.133  Sum_probs=61.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---ccc-------cccCC---ccC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---TLM-------EFVDP---RLG   67 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~-------~~~~~---~~~   67 (214)
                      +|||++....++.++||||||++++|+++|+.||......   .............   ...       .....   ...
T Consensus       186 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (326)
T 1blx_A          186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV---DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPI  262 (326)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCG
T ss_pred             eCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHHHcCCCCcccCccccccchhhhcccCcchh
Confidence            6899999889999999999999999999999998632211   0111111100000   000       00000   000


Q ss_pred             CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .......+..+.+++.+||+.+|++||++.+++.
T Consensus       263 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          263 EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             GGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            0111223447889999999999999999999985

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.22  E-value=1.2e-11  Score=100.75  Aligned_cols=92  Identities=18%  Similarity=0.252  Sum_probs=60.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++.+..++.++||||||++++||++|+.||.....      ..............    +.   ......+..+..
T Consensus       186 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~----~~---~~~~~~~~~l~~  252 (311)
T 3ork_A          186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDPIP----PS---ARHEGLSADLDA  252 (311)
T ss_dssp             CCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHCCCCC----HH---HHSTTCCHHHHH
T ss_pred             CCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcCCCCC----cc---cccCCCCHHHHH
Confidence            689999988999999999999999999999999853211      11111111111000    00   000112347899


Q ss_pred             HHHHhhccCCCCCCCHHHHH-HHHhc
Q 028061           81 IALLCTNASPSLRPTMSEVV-SMLEG  105 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~-~~L~~  105 (214)
                      ++.+||+.||++||+..+++ ..|..
T Consensus       253 li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          253 VVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHHHhcCHhhChhhHHHHHHHHHH
Confidence            99999999999999766655 44443

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.22  E-value=1.4e-12  Score=105.84  Aligned_cols=102  Identities=16%  Similarity=0.152  Sum_probs=60.7

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHH--------HHHhhcCcccc---ccCCccCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWA--------FHLHQSGTLME---FVDPRLGS   68 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~---~~~~~~~~   68 (214)
                      +|||++.+ ..++.++||||||++++|+++|+.||...............        ...........   ..++....
T Consensus       169 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (311)
T 4agu_A          169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDME  248 (311)
T ss_dssp             CCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCC
T ss_pred             cChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccc
Confidence            68998875 67899999999999999999999998643221100000000        00000000000   00000000


Q ss_pred             CC---CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           69 EF---NKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        69 ~~---~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ..   ....+..+.+++.+||+.||.+||++.++++.
T Consensus       249 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          249 PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             CHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             hhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            00   01123468899999999999999999999863

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.22  E-value=4.9e-12  Score=103.53  Aligned_cols=78  Identities=21%  Similarity=0.356  Sum_probs=57.5

Q ss_pred             CcccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....+ +.++||||||++++||++|+.||....            ... ....      .....    .+..+.
T Consensus       215 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~-~~~~------~~~~~----~~~~~~  271 (320)
T 3a99_A          215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EII-RGQV------FFRQR----VSSECQ  271 (320)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHH-HCCC------CCSSC----CCHHHH
T ss_pred             CChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------hhh-cccc------ccccc----CCHHHH
Confidence            68998886665 788999999999999999999985210            000 0000      01112    234788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +++.+||+.+|++||++.+|++
T Consensus       272 ~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          272 HLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHccCChhhCcCHHHHhc
Confidence            9999999999999999999986

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.21  E-value=3.2e-12  Score=103.25  Aligned_cols=87  Identities=20%  Similarity=0.311  Sum_probs=59.8

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      +|||++.     ...++.++||||||++++|+++|+.||.....      ........... .     +..  ..+...+
T Consensus       184 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~-~-----~~~--~~~~~~~  249 (302)
T 2j7t_A          184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSD-P-----PTL--LTPSKWS  249 (302)
T ss_dssp             CCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSC-C-----CCC--SSGGGSC
T ss_pred             cCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH------HHHHHHHhccC-C-----ccc--CCccccC
Confidence            5899883     56789999999999999999999999853211      11111111110 0     000  1122234


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+..++.+||+.+|.+||++.++++
T Consensus       250 ~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          250 VEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHhc
Confidence            47899999999999999999999875

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.21  E-value=3.7e-12  Score=104.27  Aligned_cols=100  Identities=14%  Similarity=0.096  Sum_probs=60.8

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHH--------HHhhcCc------cccccC--
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAF--------HLHQSGT------LMEFVD--   63 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~--------~~~~~~~------~~~~~~--   63 (214)
                      +|||++.. ..++.++|||||||+++||++|+.||....... ..+.....        .......      ....+.  
T Consensus       197 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (330)
T 3nsz_A          197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRH  275 (330)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH-HHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCC
T ss_pred             cChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH-HHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhc
Confidence            58998876 679999999999999999999999984321110 00000000        0000000      000000  


Q ss_pred             ------CccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           64 ------PRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        64 ------~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                            .......+......+.+|+.+||+.||++||++.++++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          276 SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             CCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                  00011111123457899999999999999999999986

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.21  E-value=7.8e-12  Score=106.29  Aligned_cols=89  Identities=24%  Similarity=0.262  Sum_probs=59.6

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      ||||++.   ...++.++|||||||+++||++|+.||.......  .+....    ..+... .. +    .........
T Consensus       308 ~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~~i----~~~~~~-~~-~----~~~~~~~~~  375 (419)
T 3i6u_A          308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQI----TSGKYN-FI-P----EVWAEVSEK  375 (419)
T ss_dssp             CCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHHHH----HTTCCC-CC-H----HHHTTSCHH
T ss_pred             cCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHHHH----hcCCCC-CC-c----hhhcccCHH
Confidence            6999985   3678899999999999999999999996432211  111111    011000 00 0    000112347


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +.+++.+||+.+|++||++.++++
T Consensus       376 ~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          376 ALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHccCChhHCcCHHHHhC
Confidence            899999999999999999999986

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.21  E-value=4.4e-12  Score=106.98  Aligned_cols=100  Identities=21%  Similarity=0.208  Sum_probs=61.2

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh---------cCccccccCCccCC--
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ---------SGTLMEFVDPRLGS--   68 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~--   68 (214)
                      +|||++.+. .++.++|||||||+++||++|+.||.......  .+......+..         ........-+....  
T Consensus       208 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~  285 (394)
T 4e7w_A          208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID--QLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHP  285 (394)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCC
T ss_pred             cCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCc
Confidence            689988754 68999999999999999999999996422111  01111100000         00000000000000  


Q ss_pred             ---CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           69 ---EFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        69 ---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                         .++......+.+|+.+||+.||.+||++.+++..
T Consensus       286 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          286 FSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence               0111233478999999999999999999999863

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.21  E-value=1.8e-12  Score=107.35  Aligned_cols=99  Identities=16%  Similarity=0.131  Sum_probs=60.9

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHH----------hhc-CccccccCCc---
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHL----------HQS-GTLMEFVDPR---   65 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~---   65 (214)
                      +|||++.+. .++.++|||||||+++||++|+.||.......  .+.......          ... .......+..   
T Consensus       198 ~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (360)
T 3e3p_A          198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG--QLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIP  275 (360)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCC
T ss_pred             eCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH--HHHHHHHHcCCCCHHHHHhcccchhhccccccccCC
Confidence            689988654 58999999999999999999999996422111  001110000          000 0000000000   


Q ss_pred             ---cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           66 ---LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        66 ---~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                         ............+.+|+.+||+.||.+||++.++++
T Consensus       276 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          276 WSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             cccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence               001111124567999999999999999999999986

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.20  E-value=2.6e-12  Score=106.61  Aligned_cols=36  Identities=22%  Similarity=0.403  Sum_probs=33.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      +|||++.+..++.++||||||++++||++|+.||..
T Consensus       197 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  232 (360)
T 3eqc_A          197 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  232 (360)
T ss_dssp             CCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred             ECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            689999999999999999999999999999999864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.20  E-value=1.2e-11  Score=99.57  Aligned_cols=99  Identities=14%  Similarity=0.105  Sum_probs=59.8

Q ss_pred             CcccccccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc------cccccC---------C
Q 028061            1 MAPEYALWGY-LTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT------LMEFVD---------P   64 (214)
Q Consensus         1 mAPE~~~~~~-~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---------~   64 (214)
                      +|||++.+.. ++.++|||||||+++|+++|+.|+.....  ................      .....+         .
T Consensus       168 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (292)
T 3o0g_A          168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--VDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT  245 (292)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS--HHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTT
T ss_pred             cChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC--HHHHHHHHHHHhCCCChhhhhhhcccccccccccccCC
Confidence            6899987665 89999999999999999998888632111  1111111111100000      000000         0


Q ss_pred             ccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           65 RLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        65 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .............+.+|+.+||+.||++||++.++++
T Consensus       246 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          246 TSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            0000111223457889999999999999999999985

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.20  E-value=5.9e-12  Score=108.53  Aligned_cols=99  Identities=17%  Similarity=0.116  Sum_probs=62.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHh-------------------hcC-----
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLH-------------------QSG-----   56 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~-------------------~~~-----   56 (214)
                      +|||++.+..++.++||||+||+++||++|+.||.......   ....+....                   ...     
T Consensus       230 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~---~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~  306 (464)
T 3ttj_A          230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID---QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG  306 (464)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCC
T ss_pred             cCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCC
Confidence            69999999999999999999999999999999996422110   000000000                   000     


Q ss_pred             -ccccccCCccCCCC---CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           57 -TLMEFVDPRLGSEF---NKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        57 -~~~~~~~~~~~~~~---~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                       .+.........+..   .......+.+|+.+||+.||++||++.++++.
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          307 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             CCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence             00000000000000   11125578999999999999999999999863

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.20  E-value=9.7e-12  Score=101.64  Aligned_cols=89  Identities=21%  Similarity=0.197  Sum_probs=59.8

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      +|||++.   ...++.++|||||||+++|+++|+.||.......  .+.....    .+...  ..+..    ....+..
T Consensus       183 ~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~----~~~~~--~~~~~----~~~~~~~  250 (322)
T 2ycf_A          183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQIT----SGKYN--FIPEV----WAEVSEK  250 (322)
T ss_dssp             CCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHH----HTCCC--CCHHH----HTTSCHH
T ss_pred             cCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHH----hCccc--cCchh----hhhcCHH
Confidence            6899874   5678999999999999999999999996432221  1111111    11000  00000    0112347


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +.+++.+||+.||++||++.++++
T Consensus       251 ~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          251 ALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHcccCHhhCCCHHHHhh
Confidence            899999999999999999999974

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.20  E-value=3.5e-12  Score=104.80  Aligned_cols=98  Identities=12%  Similarity=0.108  Sum_probs=59.6

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---ccccc--------cCCccCC
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---TLMEF--------VDPRLGS   68 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--------~~~~~~~   68 (214)
                      +|||++.+. .++.++|||||||+++||++|+.||.......   ............   .....        ..+....
T Consensus       204 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (329)
T 3gbz_A          204 RPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID---QLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRG  280 (329)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCC
T ss_pred             cCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH---HHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhcc
Confidence            689998864 58999999999999999999999985322110   000000000000   00000        0000000


Q ss_pred             CC-----CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 EF-----NKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ~~-----~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..     +......+.+|+.+||+.||.+||++.++++
T Consensus       281 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          281 KTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             CCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            00     0012347889999999999999999999986

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.20  E-value=1.8e-12  Score=104.50  Aligned_cols=85  Identities=18%  Similarity=0.232  Sum_probs=60.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++|+++|+.||.....      .+...... ...      .    ..+......+..
T Consensus       182 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~-~~~------~----~~~~~~~~~~~~  244 (294)
T 2rku_A          182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL------KETYLRIK-KNE------Y----SIPKHINPVAAS  244 (294)
T ss_dssp             CCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHH-TTC------C----CCCTTSCHHHHH
T ss_pred             CCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHh-hcc------C----CCccccCHHHHH
Confidence            689999888899999999999999999999999853211      11111111 110      0    111122347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ++.+||+.+|++||++.++++.
T Consensus       245 li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          245 LIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             HHHHHTCSSGGGSCCGGGGGGS
T ss_pred             HHHHHcccChhhCcCHHHHhhC
Confidence            9999999999999999999863

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.19  E-value=3.8e-12  Score=108.94  Aligned_cols=84  Identities=15%  Similarity=0.134  Sum_probs=61.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.....      ......... .      ..    ..+......+.+
T Consensus       316 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~-~------~~----~~p~~~~~~~~~  378 (446)
T 4ejn_A          316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILM-E------EI----RFPRTLGPEAKS  378 (446)
T ss_dssp             CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH-C------CC----CCCTTSCHHHHH
T ss_pred             cCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH------HHHHHHHHh-C------CC----CCCccCCHHHHH
Confidence            699999999999999999999999999999999953211      111111110 0      01    112223347899


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      |+.+||+.||.+||     ++.++++
T Consensus       379 li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          379 LLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            99999999999999     9999875

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.19  E-value=3.9e-12  Score=101.47  Aligned_cols=85  Identities=14%  Similarity=0.148  Sum_probs=59.3

Q ss_pred             CcccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+....+ +.++||||||++++|+++|+.||....      ..... .....+.      .    ..+......+.
T Consensus       177 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~-~~~~~~~------~----~~~~~~~~~l~  239 (276)
T 2h6d_A          177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH------VPTLF-KKIRGGV------F----YIPEYLNRSVA  239 (276)
T ss_dssp             CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHH-HHHHHCC------C----CCCTTSCHHHH
T ss_pred             cCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHH-HHhhcCc------c----cCchhcCHHHH
Confidence            58999887655 689999999999999999999985321      11111 1111110      0    01112234788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      .++.+||+.+|.+||++.+|++.
T Consensus       240 ~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          240 TLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHccCChhhCCCHHHHHhC
Confidence            99999999999999999999873

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.19  E-value=1.2e-11  Score=101.56  Aligned_cols=99  Identities=19%  Similarity=0.234  Sum_probs=61.0

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHH----------HHHhhcC-ccccccCCccCC
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWA----------FHLHQSG-TLMEFVDPRLGS   68 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~   68 (214)
                      +|||++.+. .++.++||||||++++|+++|+.||.......  .+....          ....... .......+....
T Consensus       191 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (331)
T 4aaa_A          191 RAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID--QLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKE  268 (331)
T ss_dssp             CCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSS
T ss_pred             cCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHHHhCCCChhhhhHhhhccccccccCccccc
Confidence            689998765 78999999999999999999999986432111  000000          0000000 000011111111


Q ss_pred             CCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 EFN-----KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+     ...+..+.+|+.+||+.||++||++.++++
T Consensus       269 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          269 REPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             CCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             cchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            111     123457899999999999999999999875

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.19  E-value=4e-12  Score=101.57  Aligned_cols=83  Identities=18%  Similarity=0.214  Sum_probs=58.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCH----HHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNK----VEAE   76 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~   76 (214)
                      +|||.+.+ .++.++||||||++++|+++|+.||.....      ........ .+.        .  ..+.    ..+.
T Consensus       175 ~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~-~~~--------~--~~~~~~~~~~~~  236 (277)
T 3f3z_A          175 VSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTD------SEVMLKIR-EGT--------F--TFPEKDWLNVSP  236 (277)
T ss_dssp             CCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-HCC--------C--CCCHHHHTTSCH
T ss_pred             cChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCH------HHHHHHHH-hCC--------C--CCCchhhhcCCH
Confidence            58998754 589999999999999999999999853211      11111111 110        0  0111    1234


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           77 RMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        77 ~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+..++.+||+.+|++||++.++++
T Consensus       237 ~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          237 QAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            7899999999999999999999974

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.19  E-value=4.9e-12  Score=102.31  Aligned_cols=85  Identities=15%  Similarity=0.130  Sum_probs=58.9

Q ss_pred             CcccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWG--YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~--~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      +|||++...  ..+.++||||||++++||++|+.||....      ......... .+.      ...    +..+...+
T Consensus       178 ~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~-~~~------~~~----~~~~~~~l  240 (305)
T 2wtk_C          178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------IYKLFENIG-KGS------YAI----PGDCGPPL  240 (305)
T ss_dssp             CCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHH-HCC------CCC----CSSSCHHH
T ss_pred             cChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHh-cCC------CCC----CCccCHHH
Confidence            589988754  34789999999999999999999985321      111111111 110      011    11233478


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      .+++.+||+.||.+||++.++++.
T Consensus       241 ~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          241 SDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHccCChhhCCCHHHHhcC
Confidence            899999999999999999999863

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.18  E-value=2.1e-12  Score=108.42  Aligned_cols=36  Identities=33%  Similarity=0.349  Sum_probs=32.7

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      +|||++.+ ..++.++|||||||+++||++|+.||..
T Consensus       197 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  233 (388)
T 3oz6_A          197 RAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG  233 (388)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence            69999876 6799999999999999999999999964

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.18  E-value=4.5e-12  Score=104.16  Aligned_cols=84  Identities=14%  Similarity=0.140  Sum_probs=59.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||.....      .........         ...  ..+......+.+
T Consensus       188 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~---------~~~--~~p~~~~~~~~~  250 (327)
T 3a62_A          188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR------KKTIDKILK---------CKL--NLPPYLTQEARD  250 (327)
T ss_dssp             SCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHH---------TCC--CCCTTSCHHHHH
T ss_pred             cCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHh---------CCC--CCCCCCCHHHHH
Confidence            689999988999999999999999999999999953211      111111110         000  112223347899


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      ++.+||+.+|.+||     ++.+++.
T Consensus       251 li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          251 LLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            99999999999999     6777765

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.18  E-value=1.6e-11  Score=104.80  Aligned_cols=87  Identities=23%  Similarity=0.254  Sum_probs=57.5

Q ss_pred             Ccccccc---cCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHH
Q 028061            1 MAPEYAL---WGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAE   76 (214)
Q Consensus         1 mAPE~~~---~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (214)
                      ||||++.   ...++.++|||||||+++|+++ |..||.....       ........... ...    .  ........
T Consensus       193 ~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-------~~~~~~~~~~~-~~~----~--~~~~~~~~  258 (432)
T 3p23_A          193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-------RQANILLGACS-LDC----L--HPEKHEDV  258 (432)
T ss_dssp             CCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-------HHHHHHTTCCC-CTT----S--CTTCHHHH
T ss_pred             cChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-------HHHHHHhccCC-ccc----c--CccccccH
Confidence            6999987   4677889999999999999999 8888842111       00000100000 000    0  11123445


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           77 RMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        77 ~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+.+|+.+||+.||.+||++.+|++
T Consensus       259 ~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          259 IARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            6789999999999999999999984

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.18  E-value=5e-12  Score=101.67  Aligned_cols=87  Identities=23%  Similarity=0.251  Sum_probs=58.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||.+.+ .++.++||||||++++|+++|+.||.....      ....... ..+...  .+  .  +.....+..+.+
T Consensus       190 ~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~-~~~~~~--~~--~--~~~~~~~~~~~~  255 (287)
T 2wei_A          190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRV-ETGKYA--FD--L--PQWRTISDDAKD  255 (287)
T ss_dssp             CCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HHCCCC--CC--S--GGGTTSCHHHHH
T ss_pred             cChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH------HHHHHHH-HcCCCC--CC--c--hhhhhcCHHHHH
Confidence            58998764 589999999999999999999999853211      1111111 111110  00  0  000112347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|++||++.++++
T Consensus       256 li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          256 LIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcccChhhCcCHHHHhc
Confidence            999999999999999999986

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.18  E-value=1.9e-12  Score=106.67  Aligned_cols=84  Identities=18%  Similarity=0.264  Sum_probs=60.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++....++.++||||||++++||++|+.||....      ..+....... ..      ..+    +......+..
T Consensus       208 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~-~~------~~~----~~~~~~~~~~  270 (335)
T 2owb_A          208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKK-NE------YSI----PKHINPVAAS  270 (335)
T ss_dssp             CCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHH-TC------CCC----CTTSCHHHHH
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHhc-CC------CCC----CccCCHHHHH
Confidence            68999988889999999999999999999999985321      1111111111 10      011    1122346889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.||++||++.++++
T Consensus       271 li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          271 LIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             HHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999986

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.18  E-value=1.1e-11  Score=102.46  Aligned_cols=99  Identities=16%  Similarity=0.102  Sum_probs=59.7

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---c--------cccccCCccCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---T--------LMEFVDPRLGS   68 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~~~   68 (214)
                      +|||++.+ ..++.++|||||||+++||++|+.||.......   ............   .        ....+......
T Consensus       195 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (351)
T 3mi9_A          195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH---QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQ  271 (351)
T ss_dssp             CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSC
T ss_pred             cCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChhhccccccchhhccccccccc
Confidence            68998875 568999999999999999999999986422111   111111100000   0        00000000000


Q ss_pred             CCC-HH------HHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           69 EFN-KV------EAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        69 ~~~-~~------~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ... ..      ....+.+|+.+||+.||++||++.++++.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          272 KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             CCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            000 11      12357899999999999999999999863

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.17  E-value=5.7e-12  Score=104.78  Aligned_cols=84  Identities=15%  Similarity=0.154  Sum_probs=60.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.....      ........ .+.      .    ..+......+..
T Consensus       205 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~-~~~------~----~~p~~~~~~~~~  267 (350)
T 1rdq_E          205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP------IQIYEKIV-SGK------V----RFPSHFSSDLKD  267 (350)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-HCC------C----CCCTTCCHHHHH
T ss_pred             cCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH------HHHHHHHH-cCC------C----CCCCCCCHHHHH
Confidence            699999988999999999999999999999999953211      11111111 111      0    112223447899


Q ss_pred             HHHHhhccCCCCCCC-----HHHHHH
Q 028061           81 IALLCTNASPSLRPT-----MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs-----~~~v~~  101 (214)
                      ++.+||+.||.+||+     +.+|+.
T Consensus       268 li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          268 LLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHhhcCHHhccCCccCCHHHHHh
Confidence            999999999999998     788764

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.17  E-value=6.4e-12  Score=103.08  Aligned_cols=84  Identities=18%  Similarity=0.193  Sum_probs=60.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||.....      .......         +....  .++......+..
T Consensus       170 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~i---------~~~~~--~~p~~~~~~~~~  232 (318)
T 1fot_A          170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEKI---------LNAEL--RFPPFFNEDVKD  232 (318)
T ss_dssp             CCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHH---------HHCCC--CCCTTSCHHHHH
T ss_pred             cCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHH---------HhCCC--CCCCCCCHHHHH
Confidence            699999988999999999999999999999999953211      1111111         11111  112223347889


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      ++.+||+.+|.+||     ++.+|+.
T Consensus       233 li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          233 LLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             HHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            99999999999999     7888874

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.16  E-value=3.7e-12  Score=108.31  Aligned_cols=99  Identities=21%  Similarity=0.205  Sum_probs=61.4

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh---------cCccccccCCccCC-C
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ---------SGTLMEFVDPRLGS-E   69 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~   69 (214)
                      ||||++.+. .++.++|||||||+++||++|+.||.......  .+......+..         .....+..-+.... .
T Consensus       223 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~--~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~  300 (420)
T 1j1b_A          223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP  300 (420)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCC
T ss_pred             CCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCC
Confidence            699998754 79999999999999999999999996422110  11111110000         00000110011100 0


Q ss_pred             ----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           70 ----FNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        70 ----~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                          ++...+..+.+|+.+||+.||.+||++.+++.
T Consensus       301 ~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          301 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             HHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence                11122357899999999999999999999985

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.16  E-value=2.9e-11  Score=98.19  Aligned_cols=79  Identities=19%  Similarity=0.341  Sum_probs=57.6

Q ss_pred             CcccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++....+ +.++||||||++++|+++|+.||....            .....       ..    ..+......+.
T Consensus       205 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~-------~~----~~~~~~~~~~~  261 (312)
T 2iwi_A          205 SPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------EILEA-------EL----HFPAHVSPDCC  261 (312)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHT-------CC----CCCTTSCHHHH
T ss_pred             cCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------HHhhh-------cc----CCcccCCHHHH
Confidence            58998876665 458999999999999999999985210            00000       00    11112334788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      +++.+||+.+|++||++.++++.
T Consensus       262 ~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          262 ALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHccCChhhCcCHHHHhcC
Confidence            99999999999999999999863

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.16  E-value=4.1e-11  Score=98.87  Aligned_cols=98  Identities=19%  Similarity=0.184  Sum_probs=59.7

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc----c--------ccccC--Cc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT----L--------MEFVD--PR   65 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----~--------~~~~~--~~   65 (214)
                      +|||++.. ..++.++|||||||+++||++|+.||.......   .............    .        .+.+.  +.
T Consensus       189 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (353)
T 2b9h_A          189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH---QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPM  265 (353)
T ss_dssp             CCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCC
T ss_pred             cCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHHhCCCchhccccccccchhhHHhhcccC
Confidence            68998764 789999999999999999999999986432100   0000000000000    0        00000  00


Q ss_pred             cC-C---CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           66 LG-S---EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        66 ~~-~---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .. .   ......+..+.+++.+||+.||++||++.++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          266 YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             CCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            00 0   000123347889999999999999999999986

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.16  E-value=4.1e-11  Score=101.26  Aligned_cols=86  Identities=17%  Similarity=0.284  Sum_probs=58.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCC--CchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNC--TCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||++.+..++.++|||||||+++||++|+.||........  ..............        ..  ..+......+
T Consensus       220 ~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--------~~--~~p~~~s~~~  289 (396)
T 4dc2_A          220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--------QI--RIPRSLSVKA  289 (396)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC--------CC--CCCTTSCHHH
T ss_pred             CCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc--------cc--CCCCcCCHHH
Confidence            699999999999999999999999999999999964322211  11111111111111        11  1222234478


Q ss_pred             HHHHHHhhccCCCCCCCH
Q 028061           79 IKIALLCTNASPSLRPTM   96 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~   96 (214)
                      ..|+.+||+.||.+||++
T Consensus       290 ~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          290 ASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             HHHHHHHTCSCTTTSTTC
T ss_pred             HHHHHHHhcCCHhHcCCC
Confidence            899999999999999985

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.16  E-value=1e-11  Score=102.37  Aligned_cols=95  Identities=16%  Similarity=0.176  Sum_probs=60.0

Q ss_pred             CcccccccC-CCCc-hhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccc------cCC---ccCCC
Q 028061            1 MAPEYALWG-YLTY-KADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEF------VDP---RLGSE   69 (214)
Q Consensus         1 mAPE~~~~~-~~t~-ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~   69 (214)
                      +|||.+... .++. ++||||||++++|+++|+.||......     ....... ..+...-.      ..+   .....
T Consensus       217 ~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~  290 (348)
T 2pml_X          217 MPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-----VELFNNI-RTKNIEYPLDRNHFLYPLTNKKSTC  290 (348)
T ss_dssp             CCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-----HHHHHHH-TSCCCCCCCSSSSSTTTTCC-----
T ss_pred             cCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HHHHHHH-hccCcCCccchhhhhcccccccccc
Confidence            689998876 6666 999999999999999999999643221     1111111 11111000      000   00000


Q ss_pred             CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           70 FNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        70 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .....+..+.+++.+||+.+|.+||++.++++
T Consensus       291 ~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          291 SNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             ---CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             chhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            01223457899999999999999999999986

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.16  E-value=8.3e-12  Score=107.96  Aligned_cols=88  Identities=15%  Similarity=0.144  Sum_probs=61.5

Q ss_pred             CcccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++.+..+ +.++|||||||+++||++|+.||.....      ....... ..+.        .  ..+......+.
T Consensus       182 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i-~~~~--------~--~~p~~~s~~~~  244 (476)
T 2y94_A          182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV------PTLFKKI-CDGI--------F--YTPQYLNPSVI  244 (476)
T ss_dssp             CCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS------HHHHHHH-HTTC--------C--CCCTTCCHHHH
T ss_pred             EChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH------HHHHHHH-hcCC--------c--CCCccCCHHHH
Confidence            68999987655 7899999999999999999999963211      1111111 1111        1  11112234788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH--HHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVS--MLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~--~L~~  105 (214)
                      +++.+||+.||.+||++.+|++  .++.
T Consensus       245 ~Li~~~L~~dP~~Rpt~~eil~hp~~~~  272 (476)
T 2y94_A          245 SLLKHMLQVDPMKRATIKDIREHEWFKQ  272 (476)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred             HHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence            9999999999999999999986  4554

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.15  E-value=5e-11  Score=100.65  Aligned_cols=37  Identities=22%  Similarity=0.302  Sum_probs=32.9

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYV   37 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~   37 (214)
                      +|||++.+ ..++.++|||||||+++||++|+.||...
T Consensus       202 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  239 (405)
T 3rgf_A          202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  239 (405)
T ss_dssp             CCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred             cCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence            68999886 45999999999999999999999999643

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.15  E-value=1.1e-11  Score=104.06  Aligned_cols=99  Identities=21%  Similarity=0.144  Sum_probs=60.5

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh---------cCccccccCCcc----
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ---------SGTLMEFVDPRL----   66 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~----   66 (214)
                      +|||++.+. .++.++||||+||+++||++|+.||......+  .+...+.....         .....+..-+..    
T Consensus       208 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~  285 (383)
T 3eb0_A          208 RAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSID--QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKD  285 (383)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCC
T ss_pred             cCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCCHHHHHHhCcccccccCCccCccc
Confidence            689988764 58999999999999999999999996422111  01111000000         000000000000    


Q ss_pred             -CCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           67 -GSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        67 -~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                       ....+...+..+.+|+.+||+.+|.+||++.++++
T Consensus       286 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          286 WRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             HHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             00011223447899999999999999999999974

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.15  E-value=2.6e-11  Score=100.71  Aligned_cols=89  Identities=16%  Similarity=0.213  Sum_probs=59.4

Q ss_pred             Cccccccc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~--~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||++.+  ..++.++|||||||+++||++|+.||........  ..........       ..+    ..+......+
T Consensus       227 ~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~-------~~~----~~~~~~~~~~  293 (355)
T 1vzo_A          227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILK-------SEP----PYPQEMSALA  293 (355)
T ss_dssp             CCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHH-------CCC----CCCTTSCHHH
T ss_pred             cChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHhc-------cCC----CCCcccCHHH
Confidence            68999875  3578999999999999999999999964322211  1111111110       011    1222234478


Q ss_pred             HHHHHHhhccCCCCCC-----CHHHHHHH
Q 028061           79 IKIALLCTNASPSLRP-----TMSEVVSM  102 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RP-----s~~~v~~~  102 (214)
                      .+|+.+||+.||.+||     ++.++++.
T Consensus       294 ~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          294 KDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             HHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             HHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            8999999999999999     88988764

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.15  E-value=1.7e-11  Score=102.37  Aligned_cols=88  Identities=15%  Similarity=0.216  Sum_probs=58.1

Q ss_pred             Cccccccc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHH
Q 028061            1 MAPEYALW------GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVE   74 (214)
Q Consensus         1 mAPE~~~~------~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (214)
                      +|||++..      ..++.++|||||||+++||++|+.||.....      .... .....+... ...+. ..    ..
T Consensus       266 ~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~~~~-~~i~~~~~~-~~~~~-~~----~~  332 (365)
T 2y7j_A          266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ------ILML-RMIMEGQYQ-FSSPE-WD----DR  332 (365)
T ss_dssp             CCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHH-HHHHHTCCC-CCHHH-HS----SS
T ss_pred             cChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH------HHHH-HHHHhCCCC-CCCcc-cc----cC
Confidence            68998863      3588999999999999999999999853211      0111 110011000 00000 00    12


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           75 AERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +..+..++.+||+.+|++||++.++++
T Consensus       333 ~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          333 SSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            346889999999999999999999986

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.15  E-value=7.4e-12  Score=104.25  Aligned_cols=84  Identities=15%  Similarity=0.245  Sum_probs=59.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||.....      ........         ....  .++......+..
T Consensus       188 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~---------~~~~--~~p~~~s~~~~~  250 (353)
T 2i0e_A          188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIM---------EHNV--AYPKSMSKEAVA  250 (353)
T ss_dssp             CCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH---------HCCC--CCCTTSCHHHHH
T ss_pred             cChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH------HHHHHHHH---------hCCC--CCCCCCCHHHHH
Confidence            699999989999999999999999999999999963211      11111111         1111  112223447899


Q ss_pred             HHHHhhccCCCCCCC-----HHHHHH
Q 028061           81 IALLCTNASPSLRPT-----MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs-----~~~v~~  101 (214)
                      ++.+||+.+|.+||+     +.+|+.
T Consensus       251 li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          251 ICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             HHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             HHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            999999999999996     466653

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.14  E-value=3.7e-11  Score=99.63  Aligned_cols=86  Identities=17%  Similarity=0.284  Sum_probs=57.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCC--chhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCT--CPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.........  .............        ..  ..+......+
T Consensus       177 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--------~~--~~p~~~s~~~  246 (345)
T 3a8x_A          177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--------QI--RIPRSLSVKA  246 (345)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--------CC--CCCTTSCHHH
T ss_pred             cCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--------CC--CCCCCCCHHH
Confidence            6999999889999999999999999999999999643221110  1111111111111        11  1122234478


Q ss_pred             HHHHHHhhccCCCCCCCH
Q 028061           79 IKIALLCTNASPSLRPTM   96 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~   96 (214)
                      ..++.+||+.||.+||++
T Consensus       247 ~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          247 ASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             HHHHHHHTCSSTTTSTTC
T ss_pred             HHHHHHHhcCCHhHCCCC
Confidence            899999999999999995

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.14  E-value=3.3e-12  Score=106.37  Aligned_cols=84  Identities=15%  Similarity=0.171  Sum_probs=60.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++||||+||+++||++|+.||.....      .+......         ....  .++......+..
T Consensus       191 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~---------~~~~--~~p~~~~~~~~~  253 (353)
T 3txo_A          191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE------DDLFEAIL---------NDEV--VYPTWLHEDATG  253 (353)
T ss_dssp             CCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH---------HCCC--CCCTTSCHHHHH
T ss_pred             EChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH------HHHHHHHH---------cCCC--CCCCCCCHHHHH
Confidence            699999988999999999999999999999999963211      11111111         1111  112223347889


Q ss_pred             HHHHhhccCCCCCCCH------HHHHH
Q 028061           81 IALLCTNASPSLRPTM------SEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~------~~v~~  101 (214)
                      ++.+||+.+|.+||++      .+|++
T Consensus       254 li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          254 ILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             HHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             HHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            9999999999999998      66664

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.14  E-value=1.1e-10  Score=100.82  Aligned_cols=92  Identities=20%  Similarity=0.207  Sum_probs=62.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+ .++.++||||+||+++|+++|+.||.....      ....... ..+...      ...+.....+..+.+
T Consensus       190 ~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i-~~~~~~------~~~~~~~~~s~~~~~  255 (486)
T 3mwu_A          190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRV-ETGKYA------FDLPQWRTISDDAKD  255 (486)
T ss_dssp             CCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HHTCCC------SCSGGGGGSCHHHHH
T ss_pred             CCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHH-HhCCCC------CCCcccCCCCHHHHH
Confidence            69998864 699999999999999999999999953211      1111111 111100      000111123447889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH--HhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSM--LEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~--L~~~  106 (214)
                      ++.+||+.+|.+||++.++++.  ++..
T Consensus       256 li~~~L~~dp~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          256 LIRKMLTFHPSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred             HHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence            9999999999999999999863  5543

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.14  E-value=4e-11  Score=99.10  Aligned_cols=99  Identities=15%  Similarity=0.151  Sum_probs=60.7

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---c------cccccCCccCCCC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---T------LMEFVDPRLGSEF   70 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~   70 (214)
                      +|||++.+ ..++.++|||||||+++||++|..||......   .....+.......   .      +.+.+.....+..
T Consensus       179 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (346)
T 1ua2_A          179 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL---DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI  255 (346)
T ss_dssp             CCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCC
T ss_pred             cCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHHHcCCCChhhhhhhccCcccccccccCCC
Confidence            68999875 45899999999999999999999888532111   0011111100000   0      0000000000111


Q ss_pred             C-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           71 N-----KVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        71 ~-----~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      +     ......+.+++.+||+.||.+||++.++++.
T Consensus       256 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          256 PLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             CHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             ChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            1     1123578999999999999999999999874

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.14  E-value=3e-11  Score=101.68  Aligned_cols=87  Identities=18%  Similarity=0.297  Sum_probs=59.2

Q ss_pred             Cccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALW---GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~---~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      ||||++..   ..++.++|||||||+++||++|+.||.......   ......... ..      .    ...+......
T Consensus       181 ~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~---~~~~~~~~~-~~------~----~~~p~~~s~~  246 (384)
T 4fr4_A          181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS---SKEIVHTFE-TT------V----VTYPSAWSQE  246 (384)
T ss_dssp             CCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC---HHHHHHHHH-HC------C----CCCCTTSCHH
T ss_pred             cCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc---HHHHHHHHh-hc------c----cCCCCcCCHH
Confidence            69999873   458999999999999999999999996433222   111111110 00      0    1112223447


Q ss_pred             HHHHHHHhhccCCCCCCC-HHHHHH
Q 028061           78 MIKIALLCTNASPSLRPT-MSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs-~~~v~~  101 (214)
                      +..|+.+||+.+|.+||+ +.+|+.
T Consensus       247 ~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          247 MVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HHHHHHHHhcCCHhHhcccHHHHHc
Confidence            899999999999999998 677653

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.14  E-value=1.9e-11  Score=101.80  Aligned_cols=98  Identities=14%  Similarity=0.153  Sum_probs=59.9

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccc-----------ccc-CCccC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLM-----------EFV-DPRLG   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~   67 (214)
                      +|||++.. ..++.++|||||||+++||++|+.||.......   ....+..........           ... .....
T Consensus       198 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (364)
T 3qyz_A          198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD---QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK  274 (364)
T ss_dssp             CCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG---HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCC
T ss_pred             CCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH---HHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCc
Confidence            68998764 458999999999999999999999996432211   111111100000000           000 00000


Q ss_pred             CCCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 SEFN-----KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ...+     ......+.+|+.+||+.||.+||++.++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          275 NKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             CCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0001     112346889999999999999999999986

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.14  E-value=7.7e-12  Score=108.00  Aligned_cols=87  Identities=21%  Similarity=0.208  Sum_probs=59.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+ .++.++||||+||+++|+++|+.||.....      ....... ..+...      ...+.....+..+..
T Consensus       195 ~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i-~~~~~~------~~~~~~~~~s~~~~~  260 (484)
T 3nyv_A          195 IAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE------YDILKKV-EKGKYT------FELPQWKKVSESAKD  260 (484)
T ss_dssp             CCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HHCCCC------CCSGGGGGSCHHHHH
T ss_pred             cCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH------HHHHHHH-HcCCCC------CCCcccccCCHHHHH
Confidence            68998864 799999999999999999999999963211      1111111 111110      000111223457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|.+||++.++++
T Consensus       261 li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          261 LIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHCCCChhHCcCHHHHhh
Confidence            999999999999999999985

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.14  E-value=2.8e-11  Score=104.87  Aligned_cols=87  Identities=18%  Similarity=0.189  Sum_probs=59.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++. +.++.++||||+||+++||++|..||.....      ....... ..+...  .+.    +.....+..+..
T Consensus       205 ~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i-~~~~~~--~~~----~~~~~~s~~~~~  270 (494)
T 3lij_A          205 IAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD------QEILRKV-EKGKYT--FDS----PEWKNVSEGAKD  270 (494)
T ss_dssp             CCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HHTCCC--CCS----GGGTTSCHHHHH
T ss_pred             eCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHH-HhCCCC--CCc----hhcccCCHHHHH
Confidence            6899875 5799999999999999999999999963221      1111111 111100  000    001123347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ++.+||+.+|.+||++.++++
T Consensus       271 li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          271 LIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHCCCChhhCccHHHHhc
Confidence            999999999999999999974

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.13  E-value=1.4e-11  Score=110.05  Aligned_cols=87  Identities=15%  Similarity=0.100  Sum_probs=59.8

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.. ..|+.++|+||+||+++||++|+.||.......   ........         ....  ..++......+.
T Consensus       357 mAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~---~~~i~~~i---------~~~~--~~~p~~~S~~a~  422 (689)
T 3v5w_A          357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMT---------LTMA--VELPDSFSPELR  422 (689)
T ss_dssp             CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC---HHHHHHHH---------HHCC--CCCCTTSCHHHH
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHhh---------cCCC--CCCCccCCHHHH
Confidence            89999975 479999999999999999999999996432221   11111000         0000  112222344789


Q ss_pred             HHHHHhhccCCCCCCC-----HHHHHH
Q 028061           80 KIALLCTNASPSLRPT-----MSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs-----~~~v~~  101 (214)
                      +|+.+||+.||.+|++     +.+|+.
T Consensus       423 dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          423 SLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             HHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             HHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            9999999999999998     577753

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.13  E-value=7.5e-12  Score=100.91  Aligned_cols=88  Identities=18%  Similarity=0.183  Sum_probs=59.3

Q ss_pred             Ccccccc------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHH
Q 028061            1 MAPEYAL------WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVE   74 (214)
Q Consensus         1 mAPE~~~------~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (214)
                      +|||++.      ...++.++||||||++++|+++|+.||.....      ........ .+..      ....+.....
T Consensus       190 ~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~-~~~~------~~~~~~~~~~  256 (298)
T 1phk_A          190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------MLMLRMIM-SGNY------QFGSPEWDDY  256 (298)
T ss_dssp             CCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-HTCC------CCCTTTGGGS
T ss_pred             cCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH------HHHHHHHh-cCCc------ccCccccccc
Confidence            5899875      45688999999999999999999999853211      11111111 1110      0001111223


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           75 AERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +..+..++.+||+.+|.+||++.++++
T Consensus       257 ~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          257 SDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            457899999999999999999999975

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.13  E-value=1e-11  Score=102.90  Aligned_cols=97  Identities=14%  Similarity=0.139  Sum_probs=61.3

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC------------------ccccc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG------------------TLMEF   61 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~   61 (214)
                      +|||++.. ..++.++||||||++++|+++|+.||.......   ............                  .+...
T Consensus       190 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (353)
T 3coi_A          190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD---QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT  266 (353)
T ss_dssp             SCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH---HHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBC
T ss_pred             CCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCC
Confidence            68998876 688999999999999999999999986422110   000000000000                  00000


Q ss_pred             cCCccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           62 VDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+.+ ..........+.+++.+||+.||++||++.+++.
T Consensus       267 ~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          267 PRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             SSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            00011 1111233457899999999999999999999985

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.13  E-value=9.3e-12  Score=104.02  Aligned_cols=98  Identities=17%  Similarity=0.176  Sum_probs=61.5

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc------------------cccc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT------------------LMEF   61 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~   61 (214)
                      +|||++.+ ..++.++||||+||+++||++|+.||.......   ....+........                  +...
T Consensus       192 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  268 (367)
T 1cm8_A          192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD---QLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL  268 (367)
T ss_dssp             CCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCC
T ss_pred             CCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCC
Confidence            68998876 689999999999999999999999996322110   0000000000000                  0000


Q ss_pred             cCCccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           62 VDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ....+ ..........+.+|+.+||+.||.+||++.++++.
T Consensus       269 ~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          269 EKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             CCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence            00000 01111234478899999999999999999999873

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.13  E-value=5.8e-12  Score=105.65  Aligned_cols=83  Identities=12%  Similarity=0.072  Sum_probs=58.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.....      .......         +....  ..+......+..
T Consensus       206 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i---------~~~~~--~~~~~~~~~~~~  268 (373)
T 2r5t_A          206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT------AEMYDNI---------LNKPL--QLKPNITNSARH  268 (373)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH------HHHHHHH---------HHSCC--CCCSSSCHHHHH
T ss_pred             cCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHH---------Hhccc--CCCCCCCHHHHH
Confidence            699999998999999999999999999999999953211      1111111         11111  111123347889


Q ss_pred             HHHHhhccCCCCCCCHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVV  100 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~  100 (214)
                      ++.+||+.||.+||++.+.+
T Consensus       269 li~~lL~~dp~~R~~~~~~~  288 (373)
T 2r5t_A          269 LLEGLLQKDRTKRLGAKDDF  288 (373)
T ss_dssp             HHHHHTCSSGGGSTTTTTTH
T ss_pred             HHHHHcccCHHhCCCCCCCH
Confidence            99999999999999985433

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.12  E-value=5.9e-11  Score=99.10  Aligned_cols=99  Identities=13%  Similarity=0.118  Sum_probs=61.1

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc--------------cccccCCc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT--------------LMEFVDPR   65 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~   65 (214)
                      +|||++.. ..++.++|||||||+++|+++|+.||.......   .............              ....+...
T Consensus       208 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (371)
T 4exu_A          208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD---QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT  284 (371)
T ss_dssp             SCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCC
T ss_pred             cCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCC
Confidence            68999876 689999999999999999999999996322110   0000000000000              00000000


Q ss_pred             cCCC---CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           66 LGSE---FNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        66 ~~~~---~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ....   ........+.+|+.+||+.||++||++.++++.
T Consensus       285 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          285 PRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             CCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             cchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            0000   011124578999999999999999999999863

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.12  E-value=1.8e-11  Score=101.57  Aligned_cols=98  Identities=15%  Similarity=0.148  Sum_probs=60.8

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc-----------cccccCCccC-
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT-----------LMEFVDPRLG-   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~-   67 (214)
                      +|||++.. ..++.++|||||||+++|+++|+.||.......   .............           ....+..... 
T Consensus       200 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (362)
T 3pg1_A          200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN---QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSN  276 (362)
T ss_dssp             CCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCC
T ss_pred             cCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCChHHhhhccchhhhHHHHhhccc
Confidence            68998876 679999999999999999999999986422110   0110000000000           0000100000 


Q ss_pred             --C----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 --S----EFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 --~----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                        .    .........+.+|+.+||+.+|.+||++.++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          277 VPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             CCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence              0    001112346889999999999999999999986

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.12  E-value=8.2e-12  Score=101.37  Aligned_cols=98  Identities=14%  Similarity=0.148  Sum_probs=59.9

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhc----------CccccccCCccC-C
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS----------GTLMEFVDPRLG-S   68 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~-~   68 (214)
                      +|||.+.. ..++.++||||||++++|+++|+.||.......   ...........          ..+...+..... .
T Consensus       191 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (320)
T 2i6l_A          191 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE---QMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEP  267 (320)
T ss_dssp             CCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSC
T ss_pred             cCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCchhhhhhhhhcCcccccccccCC
Confidence            58998765 689999999999999999999999986422110   00000000000          000000000000 0


Q ss_pred             CC-----CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           69 EF-----NKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        69 ~~-----~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..     ....+..+.+++.+||+.||++||++.++++
T Consensus       268 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          268 HKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             CCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            00     0112457899999999999999999999985

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.11  E-value=2.4e-11  Score=97.81  Aligned_cols=86  Identities=23%  Similarity=0.299  Sum_probs=56.4

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||++.+ +.++.++||||||++++|+++   |+...     .......... ..      .........+...+..+.
T Consensus       197 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~-----~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~  261 (303)
T 1zy4_A          197 VATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG-----MERVNILKKL-RS------VSIEFPPDFDDNKMKVEK  261 (303)
T ss_dssp             SCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH-----HHHHHHHHHH-HS------TTCCCCTTCCTTTSHHHH
T ss_pred             cCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc-----hhHHHHHHhc-cc------cccccCccccccchHHHH
Confidence            58998875 478999999999999999998   43210     0000111111 00      111112223333445788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +++.+||+.||.+||++.++++
T Consensus       262 ~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          262 KIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhcCcccCcCHHHHhC
Confidence            9999999999999999999986

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.10  E-value=4.4e-12  Score=105.30  Aligned_cols=83  Identities=17%  Similarity=0.247  Sum_probs=59.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.....      ........ .+      .+.    .+......+..
T Consensus       185 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~-~~------~~~----~p~~~s~~~~~  247 (345)
T 1xjd_A          185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE------EELFHSIR-MD------NPF----YPRWLEKEAKD  247 (345)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-HC------CCC----CCTTSCHHHHH
T ss_pred             CChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHH-hC------CCC----CCcccCHHHHH
Confidence            699999988999999999999999999999999963211      11111111 00      111    12223347889


Q ss_pred             HHHHhhccCCCCCCCHH-HHH
Q 028061           81 IALLCTNASPSLRPTMS-EVV  100 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~-~v~  100 (214)
                      ++.+||+.+|.+||++. +|+
T Consensus       248 li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          248 LLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HHHHHSCSSGGGSBTTBSCGG
T ss_pred             HHHHHhcCCHhHcCCChHHHH
Confidence            99999999999999987 554

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.10  E-value=2.3e-11  Score=109.32  Aligned_cols=84  Identities=15%  Similarity=0.254  Sum_probs=61.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++....++.++|||||||+++||++|+.||.....      .+....         ++....  .++......+.+
T Consensus       509 ~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~------~~~~~~---------i~~~~~--~~p~~~s~~~~~  571 (674)
T 3pfq_A          509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQS---------IMEHNV--AYPKSMSKEAVA  571 (674)
T ss_dssp             CCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH---------HHSSCC--CCCTTSCHHHHH
T ss_pred             cCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH------HHHHHH---------HHhCCC--CCCccCCHHHHH
Confidence            799999999999999999999999999999999963211      111111         111111  122234457899


Q ss_pred             HHHHhhccCCCCCCCH-----HHHHH
Q 028061           81 IALLCTNASPSLRPTM-----SEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~-----~~v~~  101 (214)
                      |+.+||+.||.+||++     .+|++
T Consensus       572 li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          572 ICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             HHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             HHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            9999999999999997     66653

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.09  E-value=1.9e-11  Score=102.21  Aligned_cols=99  Identities=14%  Similarity=0.155  Sum_probs=60.7

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc-----------cccccCCc-cC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT-----------LMEFVDPR-LG   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-~~   67 (214)
                      +|||++.+ ..++.++|||||||+++||++|+.||.......   ....+........           ....+..- ..
T Consensus       196 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~  272 (367)
T 2fst_X          196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID---QLKLILRLVGTPGAELLKKISSESARNYIQSLTQM  272 (367)
T ss_dssp             CCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCC
T ss_pred             cChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCC
Confidence            68999876 689999999999999999999999996422110   1111111000000           00000000 00


Q ss_pred             CCCCH-----HHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           68 SEFNK-----VEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        68 ~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      +..+.     .....+.+|+.+||+.||.+||++.+++..
T Consensus       273 ~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          273 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             CCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence            00010     123468899999999999999999999863

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.09  E-value=1.7e-11  Score=106.51  Aligned_cols=92  Identities=21%  Similarity=0.182  Sum_probs=61.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      +|||++. +.++.++||||+||+++|+++|..||.....      ....... ..+...  .+.    ......+..+.+
T Consensus       215 ~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i-~~~~~~--~~~----~~~~~~s~~~~~  280 (504)
T 3q5i_A          215 IAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND------QDIIKKV-EKGKYY--FDF----NDWKNISDEAKE  280 (504)
T ss_dssp             CCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HHCCCC--CCH----HHHTTSCHHHHH
T ss_pred             CCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHH-HcCCCC--CCc----cccCCCCHHHHH
Confidence            6899876 5799999999999999999999999963221      1111111 111100  000    000112347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH--HHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVS--MLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~--~L~~~  106 (214)
                      ++.+||+.+|.+||++.++++  .+++.
T Consensus       281 li~~~L~~dp~~R~t~~e~l~h~~~~~~  308 (504)
T 3q5i_A          281 LIKLMLTYDYNKRCTAEEALNSRWIKKY  308 (504)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred             HHHHHcCCChhHCCCHHHHhcCHhhhhc
Confidence            999999999999999999985  35443

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.08  E-value=1.2e-10  Score=99.33  Aligned_cols=34  Identities=26%  Similarity=0.313  Sum_probs=28.8

Q ss_pred             Cccccc-ccCCCCchhhHHHHHHHHHHHHcCCCCC
Q 028061            1 MAPEYA-LWGYLTYKADVYSFGVVALEIVSGKNNM   34 (214)
Q Consensus         1 mAPE~~-~~~~~t~ksDVySfGivl~Ei~tg~~p~   34 (214)
                      +|||++ ....++.++|||||||+++||++|..|+
T Consensus       218 ~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          218 RAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             cCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            689986 4667999999999999999999865554

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.06  E-value=6.1e-11  Score=95.95  Aligned_cols=81  Identities=16%  Similarity=0.147  Sum_probs=53.1

Q ss_pred             cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCC----HHHHHHHHHHHH
Q 028061            8 WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFN----KVEAERMIKIAL   83 (214)
Q Consensus         8 ~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~   83 (214)
                      ...++.++|||||||+++||++|+.||........            .......+.... ...+    ...+..+..++.
T Consensus       172 ~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~  238 (299)
T 3m2w_A          172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------------SPGMKTRIRMGQ-YEFPNPEWSEVSEEVKMLIR  238 (299)
T ss_dssp             TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------------CCSCCSSCTTC-CSSCHHHHTTSCHHHHHHHH
T ss_pred             cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------------hHHHHHHHhhcc-ccCCchhcccCCHHHHHHHH
Confidence            45688999999999999999999999854322110            000011111000 0111    123457899999


Q ss_pred             HhhccCCCCCCCHHHHHH
Q 028061           84 LCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        84 ~C~~~~p~~RPs~~~v~~  101 (214)
                      +||+.+|.+||++.++++
T Consensus       239 ~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          239 NLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             HHTCSSTTTSCCHHHHHT
T ss_pred             HHcccChhhCCCHHHHhc
Confidence            999999999999999986

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.06  E-value=2.1e-10  Score=98.27  Aligned_cols=30  Identities=33%  Similarity=0.401  Sum_probs=26.6

Q ss_pred             Cccccc-ccCCCCchhhHHHHHHHHHHHHcC
Q 028061            1 MAPEYA-LWGYLTYKADVYSFGVVALEIVSG   30 (214)
Q Consensus         1 mAPE~~-~~~~~t~ksDVySfGivl~Ei~tg   30 (214)
                      ||||++ ....++.++|||||||+++||++|
T Consensus       250 ~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          250 RAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            699976 466799999999999999999984

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.05  E-value=8.3e-11  Score=103.77  Aligned_cols=88  Identities=18%  Similarity=0.220  Sum_probs=61.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||........  . .........      ...    .++......+..
T Consensus       352 ~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~-~~i~~~i~~------~~~----~~p~~~s~~~~d  418 (576)
T 2acx_A          352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--R-EEVERLVKE------VPE----EYSERFSPQARS  418 (576)
T ss_dssp             CCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--H-HHHHHHHHH------CCC----CCCTTSCHHHHH
T ss_pred             cCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--H-HHHHHHhhc------ccc----cCCccCCHHHHH
Confidence            699999988999999999999999999999999964322211  1 111111000      011    112223347899


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      |+.+||+.||.+||     ++.+|++
T Consensus       419 LI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          419 LCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             HHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             HHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            99999999999999     6788764

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.05  E-value=1.4e-10  Score=101.76  Aligned_cols=83  Identities=13%  Similarity=0.174  Sum_probs=57.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.......  ..........         ...  ..++...+..+..
T Consensus       356 ~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~~i~---------~~~--~~~p~~~s~~~~~  422 (543)
T 3c4z_A          356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQRVL---------EQA--VTYPDKFSPASKD  422 (543)
T ss_dssp             SCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHHHHH---------HCC--CCCCTTSCHHHHH
T ss_pred             cChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHHHHh---------hcc--cCCCcccCHHHHH
Confidence            69999999899999999999999999999999996432211  1111111111         000  0112223447889


Q ss_pred             HHHHhhccCCCCCCCH
Q 028061           81 IALLCTNASPSLRPTM   96 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~   96 (214)
                      ++.+||+.+|.+||++
T Consensus       423 li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          423 FCEALLQKDPEKRLGF  438 (543)
T ss_dssp             HHHHHSCSSGGGSCCC
T ss_pred             HHHHhccCCHhHCCCC
Confidence            9999999999999975

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.03  E-value=4e-10  Score=93.71  Aligned_cols=85  Identities=8%  Similarity=-0.009  Sum_probs=60.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||......                 .. .+...+... +  ....+..
T Consensus       252 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-----------------~~-~~~~~~~~~-~--~~~~~~~  310 (365)
T 3e7e_A          252 QCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG-----------------EC-KPEGLFRRL-P--HLDMWNE  310 (365)
T ss_dssp             CCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-----------------EE-EECSCCTTC-S--SHHHHHH
T ss_pred             CChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-----------------ce-eechhcccc-C--cHHHHHH
Confidence            7999999989999999999999999999999998421111                 00 011111111 1  2345778


Q ss_pred             HHHHhhccCCCCC-CCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLR-PTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~R-Ps~~~v~~~L~~~  106 (214)
                      ++..|++.+|.+| |++.++.+.|+..
T Consensus       311 ~~~~~l~~~p~~r~~~~~~l~~~l~~~  337 (365)
T 3e7e_A          311 FFHVMLNIPDCHHLPSLDLLRQKLKKV  337 (365)
T ss_dssp             HHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence            8999999999988 6788887777753

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.03  E-value=2.1e-10  Score=92.61  Aligned_cols=86  Identities=6%  Similarity=0.064  Sum_probs=57.9

Q ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCC--CCCHHHHHHHHHHHHHhhc
Q 028061           10 YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGS--EFNKVEAERMIKIALLCTN   87 (214)
Q Consensus        10 ~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~C~~   87 (214)
                      .++.++|||||||++||+++|+.||..........            .....+......  ......+..+..++.+||+
T Consensus       178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  245 (286)
T 3uqc_A          178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA------------PAERDTAGQPIEPADIDRDIPFQISAVAARSVQ  245 (286)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE------------ECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHC
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH------------HHHHHhccCCCChhhcccCCCHHHHHHHHHHcc
Confidence            57889999999999999999999996433221100            000111110000  0011233478999999999


Q ss_pred             cCCCCCCCHHHHHHHHhcCCC
Q 028061           88 ASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        88 ~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      .||++| ++.++++.|+....
T Consensus       246 ~dP~~R-s~~el~~~L~~~~~  265 (286)
T 3uqc_A          246 GDGGIR-SASTLLNLMQQATA  265 (286)
T ss_dssp             TTSSCC-CHHHHHHHHHHHHC
T ss_pred             cCCccC-CHHHHHHHHHHHhc
Confidence            999999 99999999997544

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.02  E-value=2.4e-10  Score=102.24  Aligned_cols=94  Identities=17%  Similarity=0.179  Sum_probs=57.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh----cCccccccC------Cc--cCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ----SGTLMEFVD------PR--LGS   68 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------~~--~~~   68 (214)
                      +|||++.+..++.++||||||++++|+++|+.||.....     ...|......    .........      ..  ...
T Consensus       190 ~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~  264 (676)
T 3qa8_A          190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPN  264 (676)
T ss_dssp             CSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC------CCSCCCCSSSCCCCSSSCCSC
T ss_pred             CChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccchhhhhhhhhccccccccccCCch
Confidence            689999999999999999999999999999999853210     0000000000    000000000      00  011


Q ss_pred             CCCHHHHHHHHHHHHHhhccCCCCCCCHHHH
Q 028061           69 EFNKVEAERMIKIALLCTNASPSLRPTMSEV   99 (214)
Q Consensus        69 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v   99 (214)
                      ......+..+..++.+||..||++||++.++
T Consensus       265 ~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          265 HLSGILAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             CCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             hhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence            2334456789999999999999999998663

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.01  E-value=2.6e-11  Score=102.94  Aligned_cols=89  Identities=11%  Similarity=0.055  Sum_probs=59.0

Q ss_pred             CcccccccCC----CCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHH
Q 028061            1 MAPEYALWGY----LTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAE   76 (214)
Q Consensus         1 mAPE~~~~~~----~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (214)
                      ||||++....    ++.++|||||||+++||++|+.||.....      ...........  .. +.  .  +.......
T Consensus       236 ~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~--~~-~~--~--p~~~~~s~  302 (410)
T 3v8s_A          236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMNHK--NS-LT--F--PDDNDISK  302 (410)
T ss_dssp             CCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHH--HH-CC--C--CTTCCCCH
T ss_pred             cCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh------hhHHHHHHhcc--cc-cc--C--CCcccccH
Confidence            6999987654    88999999999999999999999963211      11111110000  00 00  0  00011234


Q ss_pred             HHHHHHHHhhccCCCC--CCCHHHHHHH
Q 028061           77 RMIKIALLCTNASPSL--RPTMSEVVSM  102 (214)
Q Consensus        77 ~~~~l~~~C~~~~p~~--RPs~~~v~~~  102 (214)
                      .+..|+.+||..+|.+  ||++.+|++.
T Consensus       303 ~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          303 EAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             HHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             HHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            7889999999988888  9999999864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.97  E-value=3.4e-11  Score=103.02  Aligned_cols=89  Identities=13%  Similarity=0.123  Sum_probs=58.2

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      ||||++.     .+.++.++|||||||+++||++|+.||.....      .+.........  ....-+.....    ..
T Consensus       243 ~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~--~~~~~p~~~~~----~s  310 (437)
T 4aw2_A          243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHK--ERFQFPTQVTD----VS  310 (437)
T ss_dssp             CCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHH--HHCCCCSSCCC----SC
T ss_pred             eChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh------hHHHHhhhhcc--ccccCCccccc----CC
Confidence            6999987     56799999999999999999999999963211      11111110000  00000111111    23


Q ss_pred             HHHHHHHHHhhccCCCC--CCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSL--RPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~--RPs~~~v~~  101 (214)
                      ..+.+|+.+|+..+|++  ||++.++++
T Consensus       311 ~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          311 ENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             HHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            47888999999887777  999999986

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.97  E-value=4.8e-11  Score=101.38  Aligned_cols=88  Identities=16%  Similarity=0.159  Sum_probs=56.7

Q ss_pred             Ccccccc-------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHH
Q 028061            1 MAPEYAL-------WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKV   73 (214)
Q Consensus         1 mAPE~~~-------~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (214)
                      ||||++.       .+.++.++|||||||+++||++|+.||......      .........   ...+.  . +..+..
T Consensus       230 ~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~---~~~~~--~-p~~~~~  297 (412)
T 2vd5_A          230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA------ETYGKIVHY---KEHLS--L-PLVDEG  297 (412)
T ss_dssp             CCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTH---HHHCC--C-C----C
T ss_pred             CCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH------HHHHHHHhc---ccCcC--C-CccccC
Confidence            6999987       357899999999999999999999999632111      111011000   00000  0 011112


Q ss_pred             HHHHHHHHHHHhhccCCCCC---CCHHHHHH
Q 028061           74 EAERMIKIALLCTNASPSLR---PTMSEVVS  101 (214)
Q Consensus        74 ~~~~~~~l~~~C~~~~p~~R---Ps~~~v~~  101 (214)
                      .+..+.+|+.+||. +|.+|   |++.+|+.
T Consensus       298 ~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          298 VPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            34478999999999 99988   58888875

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.84  E-value=1.9e-09  Score=96.95  Aligned_cols=81  Identities=17%  Similarity=0.114  Sum_probs=55.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++..+. +.++|||||||+++||++|..|+......                    .+.   ...........+..
T Consensus       244 ~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~--------------------~~~---~~~~~~~~~~~l~~  299 (681)
T 2pzi_A          244 QAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD--------------------GLP---EDDPVLKTYDSYGR  299 (681)
T ss_dssp             SCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS--------------------SCC---TTCHHHHHCHHHHH
T ss_pred             cCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc--------------------ccc---ccccccccCHHHHH
Confidence            6899887654 89999999999999999998876421100                    000   00111123357889


Q ss_pred             HHHHhhccCCCCCCC-HHHHHHHHhc
Q 028061           81 IALLCTNASPSLRPT-MSEVVSMLEG  105 (214)
Q Consensus        81 l~~~C~~~~p~~RPs-~~~v~~~L~~  105 (214)
                      ++.+||+.+|.+||+ +.++...|.+
T Consensus       300 li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          300 LLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHhhhccCChhhCCCHHHHHHHHHHH
Confidence            999999999999996 4555555543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=97.75  E-value=1.6e-05  Score=64.89  Aligned_cols=83  Identities=12%  Similarity=0.122  Sum_probs=50.7

Q ss_pred             CcccccccCCCCchhhHHHHHHH-HHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccc-c-ccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVV-ALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLM-E-FVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGiv-l~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~   77 (214)
                      ||||++.+.. +.++||||++++ ..++++|..||..         ..|.....  ..+. . .................
T Consensus       244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~  311 (336)
T 2vuw_A          244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLT--DKMLKQMTFKTKCNTPAMKQIKRK  311 (336)
T ss_dssp             TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHH--HHHHHTCCCSSCCCSHHHHHHHHH
T ss_pred             cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHH--HhhhhhhccCcccchhhhhhcCHH
Confidence            7999997555 899999998776 6677788888731         01100000  0000 0 01111111223456778


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVV  100 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~  100 (214)
                      +.+|+.+||+.+     ++.+++
T Consensus       312 ~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          312 IQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHGGGSS-----SHHHHH
T ss_pred             HHHHHHHHhccC-----CHHHHH
Confidence            999999999976     888887

>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*

Probab=92.47  E-value=0.035  Score=46.72  Aligned_cols=43  Identities=5%  Similarity=-0.097  Sum_probs=38.6

Q ss_pred             CCCCCCccccccCCccCCCCCCccchhccChhHHHHHHHhhcc
Q 028061          138 SGLEGSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDS  180 (214)
Q Consensus       138 ~~~~~~~~s~~~~~~~~~~~ss~~~~~~~~~~~y~~~d~~~d~  180 (214)
                      ....++.|+||+|||.++...+|.+++.++|+.|..|+.++..
T Consensus       213 ~~~vTVlFaDIvgFT~ls~~~~p~evv~lLn~~~~~~~~i~~~  255 (407)
T 1y10_A          213 ARQVTVAFADLVGFTQLGEVVSAEELGHLAGRLAGLARDLTAP  255 (407)
T ss_dssp             CEEEEEEEEEECSBCTTSCBCCHHHHHHHHHHHHHHHHHHCCT
T ss_pred             eeeEEEEEEEccCchHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Confidence            3445689999999999999999999999999999999999874

>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis}

Probab=91.10  E-value=0.055  Score=40.87  Aligned_cols=41  Identities=17%  Similarity=0.167  Sum_probs=37.6

Q ss_pred             CCCccccccCCccCCCCCCccchhccChhHHHHHHHhhccc
Q 028061          141 EGSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDSH  181 (214)
Q Consensus       141 ~~~~~s~~~~~~~~~~~ss~~~~~~~~~~~y~~~d~~~d~~  181 (214)
                      ..+.|.|++|||.++...+|.+++.++|+.|..++.++..|
T Consensus        11 vtvlf~DI~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i~~~   51 (204)
T 1yk9_A           11 ASVLFADIVGFTERASSTAPADLVRFLDRLYSAFDELVDQH   51 (204)
T ss_dssp             EEEEEEEESCSSCSSCCCCSSSTTTHHHHHHTTTTGGGTTS
T ss_pred             EEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            34689999999999999999999999999999999998877

>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B*

Probab=90.42  E-value=0.052  Score=41.52  Aligned_cols=41  Identities=7%  Similarity=-0.089  Sum_probs=35.6

Q ss_pred             CCCccccccCCccCCCCC----CccchhccChhHHHHHHHhhccc
Q 028061          141 EGSLSHYSSSASFLPGSS----STDDIREINAEAYLKFKAMRDSH  181 (214)
Q Consensus       141 ~~~~~s~~~~~~~~~~~s----s~~~~~~~~~~~y~~~d~~~d~~  181 (214)
                      .++.|.|++|||.++..-    .|.+++.++|+.|..|+.++..|
T Consensus        15 vtvlF~DI~gfT~l~~~l~~~~~p~~~~~~Ln~~~~~~~~~i~~~   59 (220)
T 1ab8_A           15 VCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKP   59 (220)
T ss_dssp             EEEEEEECTTHHHHCCCSTTTTTTHHHHHHHHHHHHHHHGGGGSG
T ss_pred             EEEEEEEccchHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            457999999999987664    46799999999999999999886

>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B

Probab=89.63  E-value=0.054  Score=40.21  Aligned_cols=40  Identities=18%  Similarity=0.142  Sum_probs=37.7

Q ss_pred             CCccccccCCccCCCCCCccchhccChhHHHHHHHhhccc
Q 028061          142 GSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDSH  181 (214)
Q Consensus       142 ~~~~s~~~~~~~~~~~ss~~~~~~~~~~~y~~~d~~~d~~  181 (214)
                      ++.|.|++|||.++...+|.+++.++|+.|..++.+++.|
T Consensus        11 tvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~   50 (190)
T 3et6_A           11 TVLFSDIVGFTEIASRSSPLEVXSLLDELYQRFDAAIEEY   50 (190)
T ss_dssp             EEEEEEETTHHHHTTTSCHHHHHHHHHHHHHHHHHHGGGC
T ss_pred             EEEEeEecChhHhHhhCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999999887

>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}

Probab=87.18  E-value=0.032  Score=42.91  Aligned_cols=42  Identities=10%  Similarity=-0.035  Sum_probs=38.0

Q ss_pred             CCCCccccccCCccCCCCCCccchhccChhHHHHHHHhhccc
Q 028061          140 LEGSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDSH  181 (214)
Q Consensus       140 ~~~~~~s~~~~~~~~~~~ss~~~~~~~~~~~y~~~d~~~d~~  181 (214)
                      ..++.|.|++|||.++...+|.+++.++|+.|..++.++..|
T Consensus        14 ~vtvlF~Di~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i~~~   55 (225)
T 3uvj_A           14 NVTMLFSDIVGFTAICSQCSPLQVITMLNALYTRFDQQCGEL   55 (225)
T ss_dssp             EEEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            345799999999999999999999999999999999988876

>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*

Probab=86.47  E-value=0.033  Score=42.76  Aligned_cols=41  Identities=10%  Similarity=0.120  Sum_probs=37.6

Q ss_pred             CCCccccccCCccCCCCCCccchhccChhHHHHHHHhhccc
Q 028061          141 EGSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDSH  181 (214)
Q Consensus       141 ~~~~~s~~~~~~~~~~~ss~~~~~~~~~~~y~~~d~~~d~~  181 (214)
                      .++.|.|++|||.++...+|.+++.++|+.|..++.++..|
T Consensus        35 vtvlF~DI~gfT~l~e~~~~~~~~~~Ln~~~~~~~~~i~~~   75 (220)
T 1azs_A           35 VSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAEN   75 (220)
T ss_dssp             EEEEEEEEETHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEccChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            34789999999999999899999999999999999998877

>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B

Probab=83.91  E-value=0.073  Score=40.68  Aligned_cols=39  Identities=13%  Similarity=0.113  Sum_probs=35.2

Q ss_pred             CCCccccccCCccCCCCCC----ccchhccChhHHHHHHHhhc
Q 028061          141 EGSLSHYSSSASFLPGSSS----TDDIREINAEAYLKFKAMRD  179 (214)
Q Consensus       141 ~~~~~s~~~~~~~~~~~ss----~~~~~~~~~~~y~~~d~~~d  179 (214)
                      .++.|.|++|||.++...+    |.+++.++|+.|..++.++.
T Consensus        13 vtvlF~DI~gfT~l~e~~~~~~~~~~~~~~Ln~~~~~~~~~i~   55 (219)
T 2wz1_A           13 VTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTD   55 (219)
T ss_dssp             EEEEEEEETTHHHHHHHSCCC--HHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEEEccCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3468999999999988777    89999999999999999998

>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0

Probab=83.19  E-value=0.1  Score=38.97  Aligned_cols=40  Identities=3%  Similarity=-0.068  Sum_probs=37.1

Q ss_pred             CCccccccCCccCCCCCCccchhccChhHHHHHHHhhccc
Q 028061          142 GSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDSH  181 (214)
Q Consensus       142 ~~~~s~~~~~~~~~~~ss~~~~~~~~~~~y~~~d~~~d~~  181 (214)
                      ++.|.|++|||.++...+|.+++.++|+.|..++.++..|
T Consensus        11 tvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~   50 (198)
T 3r5g_A           11 TVFFSDIRGFTELSEELEAEALTDLLNNYLNEMSKIALKY   50 (198)
T ss_dssp             EEEEEEEETHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEccccchhhhhCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999998877

>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP}

Probab=83.04  E-value=0.11  Score=39.20  Aligned_cols=40  Identities=8%  Similarity=0.037  Sum_probs=36.9

Q ss_pred             CCccccccCCccCCCCCCccchhccChhHHHHHHHhhccc
Q 028061          142 GSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDSH  181 (214)
Q Consensus       142 ~~~~s~~~~~~~~~~~ss~~~~~~~~~~~y~~~d~~~d~~  181 (214)
                      ++.|.|++|||.++...+|.+++.++|+.|..++.++..|
T Consensus        16 tvlf~Di~gfT~l~~~~~~~~~~~~l~~~~~~~~~~i~~~   55 (208)
T 2w01_A           16 TILTSDLRGFTSTSEGLNPEEVVKVLNIYFGKMADVITHH   55 (208)
T ss_dssp             EEEEEECTTHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEecChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999988877

>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A

Probab=81.39  E-value=0.12  Score=39.72  Aligned_cols=43  Identities=9%  Similarity=-0.057  Sum_probs=36.9

Q ss_pred             CCCCCCccccccCCccCCCCCCccchhccChhHHHHHHHhhccc
Q 028061          138 SGLEGSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDSH  181 (214)
Q Consensus       138 ~~~~~~~~s~~~~~~~~~~~ss~~~~~~~~~~~y~~~d~~~d~~  181 (214)
                      ....++.|.|++|||.++... |.+++.++|+.|..++.++..|
T Consensus        10 ~~~vtvlF~DI~gfT~l~~~~-~~~~~~~l~~~~~~~~~~i~~~   52 (235)
T 1fx2_A           10 TDPVTLIFTDIESSTALWAAH-PDLMPDAVAAHHRMVRSLIGRY   52 (235)
T ss_dssp             TSCEEEEEEEETTHHHHHHHC-TTTHHHHHHHHHHHHHHHHHHT
T ss_pred             CCcEEEEEEeccChHHHHHHC-HHHHHHHHHHHHHHHHHHHHHc
Confidence            334567999999999998875 8889999999999999998887

>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*

Probab=81.12  E-value=0.11  Score=39.71  Aligned_cols=40  Identities=8%  Similarity=-0.053  Sum_probs=36.8

Q ss_pred             CCccccccCCccCCCCCCccchhccChhHHHHHHHhhccc
Q 028061          142 GSLSHYSSSASFLPGSSSTDDIREINAEAYLKFKAMRDSH  181 (214)
Q Consensus       142 ~~~~s~~~~~~~~~~~ss~~~~~~~~~~~y~~~d~~~d~~  181 (214)
                      ++.|.|++|||.++...+|.+++.++|+.|..++.++..|
T Consensus        29 tvlF~DI~gfT~l~~~~~~~~~~~~Ln~~~~~~~~~i~~~   68 (219)
T 1wc3_A           29 TILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAVFEN   68 (219)
T ss_dssp             EEEEEEEESHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEecChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999998776

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	214
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	8e-18
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-17
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-16
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-15
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-15
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-14
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	7e-14
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	8e-14
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-13
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-13
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-13
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-13
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-13
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-13
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-12
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-12
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-12
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-11
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-11
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-11
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-10
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-10
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	6e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-09
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	7e-09
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-08
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-08
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-08
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	8e-08
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-06
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-06
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-06
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-06
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-06
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	8e-06
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-05
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-05
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-05
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-05
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-04
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-04
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	5e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-04
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	0.001

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (190), Expect = 8e-18
 Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 11/115 (9%)

Query: 1   MAPEYAL------WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC----PLDWAF 50
           MAPE               +AD+Y+ G+V  EI    +      D         P D + 
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238

Query: 51  HLHQSGTLMEFVDPRLGSEFNKVEAER-MIKIALLCTNASPSLRPTMSEVVSMLE 104
              +     + + P + + +   EA R M KI   C  A+ + R T   +   L 
Sbjct: 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 2e-17
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 15/114 (13%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE   +   T  +DV+SFG+V  E+++                  W    H+   +M+
Sbjct: 180 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGE------------RPYWELSNHE---VMK 224

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIP 114
            ++              + ++ + C     + RP  +++VS+L+     PD + 
Sbjct: 225 AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLK 278

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.3 bits (177), Expect = 5e-16
 Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 14/107 (13%)

Query: 1   MAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT 57
           MAPE          ++++DVY+FG+V  E+++G+     +P SN        F + +   
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-----LPYSNINNRDQIIFMVGR--- 224

Query: 58  LMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              ++ P L S+      + M ++   C       RP   ++++ +E
Sbjct: 225 --GYLSPDL-SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 1e-15
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MA E       T K+DV+SFGV+  E+++        P        D   +L Q   L+ 
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGA-----PPYPDVNTFDITVYLLQGRRLL- 254

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              P           + + ++ L C +    +RP+ SE+VS + 
Sbjct: 255 --QPEYCP-------DPLYEVMLKCWHPKAEMRPSFSELVSRIS 289

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.8 bits (170), Expect = 5e-15
 Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 18/118 (15%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE   +   + K+DV++FGV+  EI +   +                +       + E
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP---------------YPGIDLSQVYE 227

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG---SSNIPDVIPE 115
            ++     E  +   E++ ++   C   +PS RP+ +E+    E     S+I D + +
Sbjct: 228 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEK 285

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 2e-14
 Identities = 23/104 (22%), Positives = 35/104 (33%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            +PE   +   + K+DV+SFGV+  E+ S                         +G    
Sbjct: 169 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP------YENRSNSEVVEDISTG--FR 220

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              PRL S         + +I   C    P  RP  S ++  L 
Sbjct: 221 LYKPRLAST-------HVYQIMNHCWKERPEDRPAFSRLLRQLA 257

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 7e-14
 Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE       + K+DV+SFG++  EI S       VP      PL       + G  M+
Sbjct: 167 TAPEALREKKFSTKSDVWSFGILLWEIYSFG----RVPYPR--IPLKDVVPRVEKGYKMD 220

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
             D              + ++   C +   ++RP+  ++   LE
Sbjct: 221 APDGC---------PPAVYEVMKNCWHLDAAMRPSFLQLREQLE 255

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.3 bits (161), Expect = 8e-14
 Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
             PE  ++   + K+D+++FGV+  EI S                    +    +    E
Sbjct: 168 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG---------------KMPYERFTNSETAE 212

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
            +   L      + +E++  I   C +     RPT   ++S + 
Sbjct: 213 HIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 1e-13
 Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE AL+G  T K+DV+SFG++  E+ +                    +    +  +++
Sbjct: 181 TAPEAALYGRFTIKSDVWSFGILLTELTTKG---------------RVPYPGMVNREVLD 225

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
            V+            E +  +   C    P  RPT   + + LE
Sbjct: 226 QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 269

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 1e-13
 Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 18/112 (16%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE       T+++DV+S+G+   E+ S  ++                  +       +
Sbjct: 214 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSS--------------PYPGMPVDSKFYK 259

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG----SSN 108
            +         +     M  I   C +A P  RPT  ++V ++E     S+N
Sbjct: 260 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 3e-13
 Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE   +G  T K+DV+SFG++  EIV+                    +    +  +++
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR---------------IPYPGMTNPEVIQ 221

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
            ++            E + ++  LC    P  RPT   + S+LE
Sbjct: 222 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.5 bits (156), Expect = 4e-13
 Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           M PE   +   T ++DV+++GVV  EI S      Y          +   +  + G ++ 
Sbjct: 209 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY------GMAHEEVIYYVRDGNILA 262

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
             +              +  +  LC +  P+ RP+   +  +L+
Sbjct: 263 CPEN---------CPLELYNLMRLCWSKLPADRPSFCSIHRILQ 297

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 4e-13
 Identities = 19/104 (18%), Positives = 31/104 (29%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE   +   + K+DV+SFGV+  E  S                    +   +   +  
Sbjct: 177 YAPECINYYKFSSKSDVWSFGVLMWEAFSYG---------------QKPYRGMKGSEVTA 221

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
            ++              M  +  LC       RP  + V   L 
Sbjct: 222 MLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 265

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 5e-13
 Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 37/173 (21%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MA E  L    T+++DV+S+GV   E+++  +                 +    +  +  
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGS---------------KPYDGIPASEISS 224

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDVIPEAGGLS 120
            ++         +    +  I + C       RP   E++                    
Sbjct: 225 ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS---------------- 268

Query: 121 EDLRFKTLRDHPREMNSSGLEGSLSHYSSSASFLPGSSSTDDIRE-INAEAYL 172
                K  RD  R +   G E       + ++F       +D+ + ++A+ YL
Sbjct: 269 -----KMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEEDMDDVVDADEYL 316

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.2 bits (153), Expect = 1e-12
 Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE   +   T  +DV+S+G+V  E++S                 +  +    +  ++ 
Sbjct: 200 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYG---------------ERPYWDMTNQDVIN 244

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
            ++              + ++ L C     + RP   ++V+ L+
Sbjct: 245 AIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 288

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 6e-12
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE       T+++DV+SFGV+  EI +        P      P++  F L + G  M+
Sbjct: 204 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLG----GSPYPGV--PVEELFKLLKEGHRMD 257

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
                            +  +   C +A PS RPT  ++V  L+
Sbjct: 258 KPSN---------CTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 6e-12
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 15/105 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           M+PE    G  T  +DV+SFGVV  EI +      Y   SN     +        G L++
Sbjct: 202 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLSN-----EQVLRFVMEGGLLD 255

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEG 105
             D            + + ++  +C   +P +RP+  E++S ++ 
Sbjct: 256 KPDN---------CPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 291

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 1e-11
 Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MA E   +   T  +DV+S+GV+  EIVS                    +       L E
Sbjct: 193 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP---------------YCGMTCAELYE 237

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
            +      E      + +  +   C    P  RP+ ++++  L 
Sbjct: 238 KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 281

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 2e-11
 Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 14/104 (13%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE    G  T K+DV+S+G++  EI S   N                  +       +
Sbjct: 233 MAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP--------------GIPVDANFYK 278

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
            +      +      E +  I   C       RP+   + S L 
Sbjct: 279 LIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 4e-11
 Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE   +   + ++DV+S+GV   E +S                    +   +   +M 
Sbjct: 179 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQ---------------KPYKKMKGPEVMA 223

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
           F++     E        +  +   C       RP    V   + 
Sbjct: 224 FIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 1e-10
 Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 14/104 (13%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE       ++ +D + FGV   E+ +        P             + + G  + 
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYG----QEPWIGLN-GSQILHKIDKEGERLP 235

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
             +            + +  + + C    P  RPT   +   L 
Sbjct: 236 RPED---------CPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 1e-10
 Identities = 30/104 (28%), Positives = 39/104 (37%), Gaps = 14/104 (13%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE       T ++DV+SFGV+  EI S                 +      + GT M 
Sbjct: 203 MAPETIFDRVYTIQSDVWSFGVLLWEIFSL-----GASPYPGVKIDEEFCRRLKEGTRMR 257

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
             D              M +  L C +  PS RPT SE+V  L 
Sbjct: 258 APDY---------TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 292

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (137), Expect = 2e-10
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 15/101 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE     Y     DVY+FG+  LE+ + +             P     +  Q      
Sbjct: 180 MAPEMYEEKY-DESVDVYAFGMCMLEMATSE------------YPYSECQNAAQ--IYRR 224

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS 101
                  + F+KV    + +I   C   +   R ++ ++++
Sbjct: 225 VTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.2 bits (132), Expect = 6e-10
 Identities = 12/104 (11%), Positives = 25/104 (24%), Gaps = 9/104 (8%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            +    L    + + D+ S G V +    G      +  +          +   S   M 
Sbjct: 180 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT-----KRQKYERISEKKMS 234

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
                L   +              C +     +P  S +  +  
Sbjct: 235 TPIEVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFR 274

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 54.8 bits (131), Expect = 1e-09
 Identities = 15/104 (14%), Positives = 28/104 (26%), Gaps = 9/104 (8%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           M+    L    + + D+ + G V +  + G      +  +      +      QS  L E
Sbjct: 180 MSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE 239

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
                   EF         K      N +    P    +  +  
Sbjct: 240 LC-AGFPEEF--------YKYMHYARNLAFDATPDYDYLQGLFS 274

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 4e-09
 Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 15/104 (14%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE   +   T  +DV+ FGV   EI      + +          +      ++G  + 
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEI------LMHGVKPFQGVKNNDVIGRIENGERLP 229

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              P             +  +   C    PS RP  +E+ + L 
Sbjct: 230 M-PPNCPPT--------LYSLMTKCWAYDPSRRPRFTELKAQLS 264

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 7e-09
 Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 16/100 (16%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           M+PE         K+D++S G +  E+ +               P         +G + E
Sbjct: 181 MSPEQMNRMSYNEKSDIWSLGCLLYELCALM------------PPFTAFSQKELAGKIRE 228

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVV 100
               R+   ++    + + +I     N     RP++ E++
Sbjct: 229 GKFRRIPYRYS----DELNEIITRMLNLKDYHRPSVEEIL 264

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 3e-08
 Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 15/102 (14%)

Query: 1   MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLM 59
           +APE      +     DV+S G+V   +++G+         +        +   +     
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE------LPWDQPSDSCQEYSDWKEKKTY 225

Query: 60  EFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS 101
                ++ S         ++   +L  N  PS R T+ ++  
Sbjct: 226 LNPWKKIDS-----APLALLH-KILVEN--PSARITIPDIKK 259

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 3e-08
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 19/121 (15%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           MAPE         K D++S G++A+E++ G+      P  N       A +L  +    E
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE-----PPYLNENP--LRALYLIATNGTPE 235

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEV-----VSMLEGSSNIPDVIPE 115
             +P   S          +     C +     R +  E+     + + +  S++  +I  
Sbjct: 236 LQNPEKLSA----IFRDFLN---RCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAA 288

Query: 116 A 116
           A
Sbjct: 289 A 289

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (117), Expect = 6e-08
 Identities = 23/101 (22%), Positives = 34/101 (33%), Gaps = 17/101 (16%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           + PE         K D++S GV+  E + GK      P    T    +        T  +
Sbjct: 171 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK-----PPFEANTYQETYKRISRVEFTFPD 225

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS 101
           FV            A  +I         +PS RP + EV+ 
Sbjct: 226 FVTE---------GARDLIS---RLLKHNPSQRPMLREVLE 254

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 8e-08
 Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 33/129 (25%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGK-----------------------NNMSYV 37
           M+PE     + + ++D++S G+  +E+  G+                             
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPR 229

Query: 38  PDSNCTCPLDWAFHLHQSGTLMEFVD-------PRLGSEFNKVEAERMIKIALLCTNASP 90
           P +       +         + E +D       P+L S    +E +  +    L  N  P
Sbjct: 230 PRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN-KCLIKN--P 286

Query: 91  SLRPTMSEV 99
           + R  + ++
Sbjct: 287 AERADLKQL 295

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 45.1 bits (106), Expect = 2e-06
 Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 13/99 (13%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE A    + Y  D++S GV++  ++SG +     P                   + +
Sbjct: 192 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS-----PFGGENDDETLRNVKSCDWNMDD 246

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEV 99
                +  +                  A P+ R T+ + 
Sbjct: 247 SAFSGISEDG--------KDFIRKLLLADPNTRMTIHQA 277

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 44.7 bits (105), Expect = 3e-06
 Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 14/105 (13%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           ++PE A    +  ++DVYS G V  E+++G+      P +  +       H+ +      
Sbjct: 181 LSPEQARGDSVDARSDVYSLGCVLYEVLTGE-----PPFTGDSPVSVAYQHVREDPIPPS 235

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRP-TMSEVVSMLE 104
                L ++           + L     +P  R  T +E+ + L 
Sbjct: 236 ARHEGLSADL--------DAVVLKALAKNPENRYQTAAEMRADLV 272

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.6 bits (105), Expect = 3e-06
 Identities = 23/104 (22%), Positives = 33/104 (31%), Gaps = 18/104 (17%)

Query: 1   MAPEYALW---GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT 57
           MAPE  L    G    K DV+S G+  +E+   K             PL     +     
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP------------PLFNMNAMSALYH 225

Query: 58  LMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS 101
           + +   P L S          +     C    P  RPT   ++ 
Sbjct: 226 IAQNESPALQSGHWSEYFRNFVD---SCLQKIPQDRPTSEVLLK 266

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 44.3 bits (104), Expect = 4e-06
 Identities = 25/165 (15%), Positives = 47/165 (28%), Gaps = 18/165 (10%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE      + +  D+++ GV+   ++SG       P +                   E
Sbjct: 195 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGL-----SPFAGEDDLETLQNVKRCDWEFDE 249

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS---MLEGSSNIPDVIPEAG 117
                +  E                    P  R T+ + +    +    SN+   IP + 
Sbjct: 250 DAFSSVSPEA--------KDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSS- 300

Query: 118 GLSEDLRFKTLRDHPREMNSSGLEGSLSHYSSSASFLPGSSSTDD 162
                +R K    +          G ++++SS     P      D
Sbjct: 301 -RYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHRPQEYQIYD 344

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 4e-06
 Identities = 18/109 (16%), Positives = 30/109 (27%), Gaps = 10/109 (9%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSN----------CTCPLDWAF 50
            APE  L        D++S G +  E+   K       D +               DW  
Sbjct: 182 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 241

Query: 51  HLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEV 99
            +            +   +F     E    + L C   +P+ R +    
Sbjct: 242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 8e-06
 Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 13/99 (13%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           +APE   +  L  +AD++S GV+   ++SG              P            +  
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGA------------SPFLGDTKQETLANVSA 230

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEV 99
            V+     E+    +              P  R T+ + 
Sbjct: 231 -VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS 268

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 1e-05
 Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 23/125 (18%)

Query: 1   MAPEYALW-----GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQS 55
           MAPE  +          YKADV+S G+  +E+   +      P      P+     + +S
Sbjct: 177 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE-----PPHHELN-PMRVLLKIAKS 230

Query: 56  GTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM----LEGSSNIPD 111
                    R  S F              C   +   R T S+++      ++ +  I +
Sbjct: 231 EPPTLAQPSRWSSNF--------KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRE 282

Query: 112 VIPEA 116
           +I EA
Sbjct: 283 LIAEA 287

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 2e-05
 Identities = 21/99 (21%), Positives = 32/99 (32%), Gaps = 13/99 (13%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
            APE      ++   D++S G +   ++SG N     P    T        ++   T  E
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN-----PFLAETNQQIIENIMNAEYTFDE 224

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEV 99
                +       EA   +   LL        R T SE 
Sbjct: 225 EAFKEISI-----EAMDFVD-RLLVKE--RKSRMTASEA 255

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 5e-05
 Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 9/99 (9%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           +APE           D++S GV+   ++ G       P       L  +  +     + +
Sbjct: 180 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGY------PPFYSNHGLAISPGMKTRIRMGQ 233

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEV 99
           +  P         E + +I+  LL T   P+ R T++E 
Sbjct: 234 YEFPNPEWSEVSEEVKMLIR-NLLKTE--PTQRMTITEF 269

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 6e-05
 Identities = 15/104 (14%), Positives = 34/104 (32%), Gaps = 17/104 (16%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           ++PE          +D+++ G +  ++V+G       P       L +   +       E
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLP-----PFRAGNEYLIFQKIIKLEYDFPE 231

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLE 104
              P         +A  +++  LL  +   + R    E+     
Sbjct: 232 KFFP---------KARDLVE-KLLVLD--ATKRLGCEEMEGYGP 263

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 1e-04
 Identities = 16/112 (14%), Positives = 34/112 (30%), Gaps = 13/112 (11%)

Query: 1   MAPE-YALWGYLTYKADVYSFGVVALEIVSGK--------NNMSYVPDSNCTCPLDWAFH 51
            APE      Y +   D++S G +  E+V+ +         +  +        P +  + 
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228

Query: 52  LHQSGTLMEFVDPRLG----SEFNKVEAERMIKIALLCTNASPSLRPTMSEV 99
              S    +   P+      S+      E    +     +  P+ R +    
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 14/99 (14%), Positives = 29/99 (29%), Gaps = 13/99 (13%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           +APE       +   D +S GV+A  ++ G              P  +  +  +    + 
Sbjct: 176 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGY-------------PPFYDENDAKLFEQIL 222

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEV 99
             +    S +    ++             P  R T  + 
Sbjct: 223 KAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQA 261

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 3e-04
 Identities = 17/114 (14%), Positives = 31/114 (27%), Gaps = 18/114 (15%)

Query: 1   MAPEYAL-WGYLTYKADVYSFGVVALEIVSGK------------NNMSYVPDSNCTCPLD 47
            APE            D+++ G +  E++                 +     +       
Sbjct: 167 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 226

Query: 48  WAFHLHQSGTLMEFVDPRLGSEFNKV--EAERMIKIALLCTNASPSLRPTMSEV 99
               L    T   F    L   F+    +   +I+  L   N  P  R T ++ 
Sbjct: 227 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQ-GLFLFN--PCARITATQA 277

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 13/99 (13%), Positives = 28/99 (28%), Gaps = 13/99 (13%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
                        + D++S GV+   +++G              P  W         ++ 
Sbjct: 182 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS-------------PPFWHRKQMLMLRMIM 228

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEV 99
             + + GS      ++ +  +        P  R T  E 
Sbjct: 229 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 267

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 38.3 bits (88), Expect = 3e-04
 Identities = 17/112 (15%), Positives = 34/112 (30%), Gaps = 13/112 (11%)

Query: 1   MAPEYAL-WGYLTYKADVYSFGVVALEIVSGK------------NNMSYVPDSNCTCPLD 47
            AP+  +     +   D++S G +  E+V+G               +  +  +  +    
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP 226

Query: 48  WAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEV 99
               L +        +P     F K   E  I +        P+ R T  + 
Sbjct: 227 NVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 5e-04
 Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 21/117 (17%)

Query: 1   MAPEYAL-WGYLTYKADVYSFGVVALEIVSGKN---------------NMSYVPDSNCTC 44
            APE  L W   T   D++S G +  E+++GK                 ++  P +    
Sbjct: 185 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 244

Query: 45  PLDWAFHLHQSGTLMEFVDPRLGSEFNKV--EAERMIKIALLCTNASPSLRPTMSEV 99
            L      +    L E       S        A  +++  +L  +     R T  E 
Sbjct: 245 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLE-KMLVLD--AEQRVTAGEA 298

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 7e-04
 Identities = 20/100 (20%), Positives = 32/100 (32%), Gaps = 24/100 (24%)

Query: 1   MAPEYAL-WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLM 59
             PE+     Y    A V+S G++  ++V G      +P  +    +             
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-----IPFEHDEEIIRGQVFF------- 223

Query: 60  EFVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEV 99
                R+ SE           +   C    PS RPT  E+
Sbjct: 224 ---RQRVSSEC--------QHLIRWCLALRPSDRPTFEEI 252

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 0.001
 Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 17/98 (17%)

Query: 1   MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLME 60
           +APE  L     +  D +SFGV+  E++ G++     P         +      +     
Sbjct: 170 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS-----PFHGQDEEELFHSIRMDNPFYPR 224

Query: 61  FVDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSE 98
           +++          EA+ ++   L      P  R  +  
Sbjct: 225 WLEK---------EAKDLLV-KLFVRE--PEKRLGVRG 250

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	214
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.72
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.72
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.71
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.71
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.71
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.71
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.7
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.7
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.69
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.69
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.69
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.68
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.68
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.68
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.67
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.67
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.67
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.66
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.64
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.64
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.64
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.61
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.61
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.59
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.55
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.54
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.53
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.52
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.51
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.51
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.51
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.51
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.51
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.49
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.48
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.46
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.44
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.44
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.43
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.41
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.41
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.4
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.38
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.36
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.35
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.35
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.34
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.33
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.32
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.3
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.3
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.28
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.26
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.26
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.25
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.24
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.22
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.19
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.18
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.14
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.08
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.02
d1azsb_	199	Adenylyl cyclase IIC1, domain C2a {Rat (Rattus nor	90.58

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=5.2e-19  Score=141.66  Aligned_cols=89  Identities=18%  Similarity=0.234  Sum_probs=67.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||++|||++ |+.||......      +.. ..         +..+.+.+.+..++..+.
T Consensus       179 ~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~------~~~-~~---------i~~~~~~~~p~~~~~~l~  242 (285)
T d1u59a_         179 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP------EVM-AF---------IEQGKRMECPPECPPELY  242 (285)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH------HHH-HH---------HHTTCCCCCCTTCCHHHH
T ss_pred             cChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH------HHH-HH---------HHcCCCCCCCCcCCHHHH
Confidence            79999999999999999999999999998 89998643211      111 11         111122233344556899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +|+.+||+.+|++||+|.+|++.|+.
T Consensus       243 ~li~~cl~~~p~~RPs~~~i~~~L~~  268 (285)
T d1u59a_         243 ALMSDCWIYKWEDRPDFLTVEQRMRA  268 (285)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            99999999999999999999998874

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=7.5e-19  Score=140.47  Aligned_cols=93  Identities=19%  Similarity=0.323  Sum_probs=68.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++..+.++.++|||||||++|||++++.|+......     ..          +...+..+...+.+..++..+.+
T Consensus       180 ~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~-----~~----------~~~~i~~~~~~~~~~~~~~~l~~  244 (283)
T d1mqba_         180 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-----HE----------VMKAINDGFRLPTPMDCPSAIYQ  244 (283)
T ss_dssp             SCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HH----------HHHHHHTTCCCCCCTTCBHHHHH
T ss_pred             cCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH-----HH----------HHHHHhccCCCCCchhhHHHHHH
Confidence            7999999999999999999999999999976665321110     11          11112222223334445568999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      |+.+||+.+|++||+|.+|++.|+.+..
T Consensus       245 li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         245 LMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            9999999999999999999999986543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=9.5e-19  Score=141.00  Aligned_cols=91  Identities=21%  Similarity=0.314  Sum_probs=68.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||++|||++ |+.||......      +..          ..+......+.+..++..+.
T Consensus       200 ~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~------~~~----------~~i~~~~~~~~~~~~~~~l~  263 (299)
T d1jpaa_         200 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ------DVI----------NAIEQDYRLPPPMDCPSALH  263 (299)
T ss_dssp             SCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHH----------HHHHTTCCCCCCTTCCHHHH
T ss_pred             cCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH------HHH----------HHHHcCCCCCCCccchHHHH
Confidence            79999999999999999999999999998 88898532211      111          11111122233344556899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +|+.+||+.+|++||+|.+|++.|+++.
T Consensus       264 ~li~~cl~~~P~~RPs~~ei~~~L~~~l  291 (299)
T d1jpaa_         264 QLMLDCWQKDRNHRPKFGQIVNTLDKMI  291 (299)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            9999999999999999999999998653

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=6.5e-19  Score=140.50  Aligned_cols=89  Identities=22%  Similarity=0.260  Sum_probs=67.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||.+..+.++.++|||||||++|||++ |+.||.....      .+.          ...+..+.+.+.+..++..+.
T Consensus       177 ~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~------~~~----------~~~i~~~~~~~~p~~~~~~~~  240 (277)
T d1xbba_         177 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG------SEV----------TAMLEKGERMGCPAGCPREMY  240 (277)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHH----------HHHHHTTCCCCCCTTCCHHHH
T ss_pred             cCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCH------HHH----------HHHHHcCCCCCCCcccCHHHH
Confidence            79999999999999999999999999998 8999863221      111          111111122233344556899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +|+.+||+.||++||+|.+|+..|+.
T Consensus       241 ~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         241 DLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence            99999999999999999999988864

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.5e-18  Score=137.33  Aligned_cols=90  Identities=22%  Similarity=0.281  Sum_probs=66.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.++.++.++|||||||++|||++ |+.|+......   .+.             ..+..+...+.+...+..+.
T Consensus       167 ~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~---~~~-------------~~i~~~~~~~~~~~~~~~~~  230 (262)
T d1byga_         167 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVV-------------PRVEKGYKMDAPDGCPPAVY  230 (262)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHH-------------HHHTTTCCCCCCTTCCHHHH
T ss_pred             CChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH---HHH-------------HHHHcCCCCCCCccCCHHHH
Confidence            69999999999999999999999999998 66666432111   111             11112222233344455889


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +|+.+||+.||.+||+|.+|+++|+.+
T Consensus       231 ~li~~cl~~dP~~Rps~~~l~~~L~~i  257 (262)
T d1byga_         231 EVMKNCWHLDAAMRPSFLQLREQLEHI  257 (262)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=8.2e-19  Score=138.83  Aligned_cols=90  Identities=20%  Similarity=0.276  Sum_probs=64.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCC-CCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNN-MSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.|+|||||||++|||++++.| +....      ........ .         .......+..++..+.
T Consensus       169 ~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~------~~~~~~~i-~---------~~~~~~~p~~~~~~l~  232 (263)
T d1sm2a_         169 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDI-S---------TGFRLYKPRLASTHVY  232 (263)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC------HHHHHHHH-H---------HTCCCCCCTTSCHHHH
T ss_pred             CChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC------HHHHHHHH-H---------hcCCCCCccccCHHHH
Confidence            799999999999999999999999999995544 43211      11111111 1         1111122233445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.+|++||+|.+|++.|+++
T Consensus       233 ~li~~cl~~~p~~Rps~~~il~~L~~i  259 (263)
T d1sm2a_         233 QIMNHCWKERPEDRPAFSRLLRQLAEI  259 (263)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            999999999999999999999999864

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.2e-18  Score=142.01  Aligned_cols=89  Identities=27%  Similarity=0.401  Sum_probs=67.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||++|||++ |+.||.......      .         +.+++......+.+..++..+.
T Consensus       233 ~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~------~---------~~~~~~~~~~~~~p~~~~~~l~  297 (325)
T d1rjba_         233 MAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA------N---------FYKLIQNGFKMDQPFYATEEIY  297 (325)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------H---------HHHHHHTTCCCCCCTTCCHHHH
T ss_pred             CChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH------H---------HHHHHhcCCCCCCCCcCCHHHH
Confidence            79999999999999999999999999998 899986432211      0         1112222222233444556899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHh
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLE  104 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~  104 (214)
                      +|+.+||+.+|++||+|.+|++.|.
T Consensus       298 ~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         298 IIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHh
Confidence            9999999999999999999999985

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.70  E-value=1.6e-18  Score=139.75  Aligned_cols=91  Identities=21%  Similarity=0.296  Sum_probs=67.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCC-CCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGK-NNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+..++.|+|||||||++|||++|. .||.....      .+.... ...+         ...+.+..++..+.
T Consensus       209 ~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~------~e~~~~-v~~~---------~~~~~p~~~~~~~~  272 (301)
T d1lufa_         209 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH------EEVIYY-VRDG---------NILACPENCPLELY  272 (301)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHH-HHTT---------CCCCCCTTCCHHHH
T ss_pred             CCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCH------HHHHHH-HHcC---------CCCCCCccchHHHH
Confidence            7999999999999999999999999999986 45643211      111111 1111         11223334455899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +|+.+||+.+|++||+|.+|+++|+++.
T Consensus       273 ~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         273 NLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            9999999999999999999999999764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.6e-18  Score=137.89  Aligned_cols=90  Identities=27%  Similarity=0.306  Sum_probs=64.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++..+.++.++|||||||++|||++|+.|+.....     ..+.. ..         +........+..++..+.+
T Consensus       177 ~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~-----~~~~~-~~---------i~~~~~~~~p~~~~~~l~~  241 (272)
T d1qpca_         177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-----NPEVI-QN---------LERGYRMVRPDNCPEELYQ  241 (272)
T ss_dssp             SCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHH-HH---------HHTTCCCCCCTTCCHHHHH
T ss_pred             cChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCC-----HHHHH-HH---------HHhcCCCCCcccChHHHHH
Confidence            799999999999999999999999999997665432111     11111 11         1111112223334557899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      |+.+||+.+|++||+|.+|++.|+.
T Consensus       242 li~~cl~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         242 LMRLCWKERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHcCCCHhHCcCHHHHHHHhhh
Confidence            9999999999999999999999875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.3e-18  Score=135.93  Aligned_cols=89  Identities=26%  Similarity=0.390  Sum_probs=66.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.|+|||||||++|||++ |+.||......      +..... ..         ..+...|..++..+.
T Consensus       168 ~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~------~~~~~i-~~---------~~~~~~p~~~~~~l~  231 (258)
T d1k2pa_         168 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS------ETAEHI-AQ---------GLRLYRPHLASEKVY  231 (258)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH------HHHHHH-HT---------TCCCCCCTTCCHHHH
T ss_pred             CCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH------HHHHHH-Hh---------CCCCCCcccccHHHH
Confidence            69999999999999999999999999998 78888532211      111111 11         111222333445899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +|+.+||+.+|++||+|.+|++.|..
T Consensus       232 ~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         232 TIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            99999999999999999999999864

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.7e-18  Score=139.30  Aligned_cols=90  Identities=21%  Similarity=0.306  Sum_probs=67.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.++.++.++|||||||++|||++ |..||.......                +...+..+...+.+..++..+.
T Consensus       180 ~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~----------------~~~~i~~~~~~~~p~~~~~~~~  243 (317)
T d1xkka_         180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----------------ISSILEKGERLPQPPICTIDVY  243 (317)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG----------------HHHHHHHTCCCCCCTTBCHHHH
T ss_pred             cChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH----------------HHHHHHcCCCCCCCcccCHHHH
Confidence            79999999999999999999999999998 788875332111                1111111222233344556899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +|+.+||+.+|.+||+|.+|+..|+..
T Consensus       244 ~li~~cl~~dP~~RPs~~eil~~l~~~  270 (317)
T d1xkka_         244 MIMVKCWMIDADSRPKFRELIIEFSKM  270 (317)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHhCCCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999999988764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=7.1e-18  Score=134.35  Aligned_cols=96  Identities=24%  Similarity=0.432  Sum_probs=66.9

Q ss_pred             Cccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALW---GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~---~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      ||||++..   +.++.++|||||||++|||++|+.||......      .........+.    ..+.. ...+..++..
T Consensus       173 ~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~------~~~~~~~~~~~----~~p~~-~~~~~~~~~~  241 (276)
T d1uwha_         173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR------DQIIFMVGRGY----LSPDL-SKVRSNCPKA  241 (276)
T ss_dssp             CCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHHTS----CCCCG-GGSCTTCCHH
T ss_pred             CCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCC----CCCcc-hhccccchHH
Confidence            79999864   46899999999999999999999999643211      11111111111    11111 1122334458


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +.+|+.+||+.+|++||+|.+|++.|+.+.
T Consensus       242 l~~li~~cl~~dp~~RPt~~~il~~Le~l~  271 (276)
T d1uwha_         242 MKRLMAECLKKKRDERPLFPQILASIELLA  271 (276)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            999999999999999999999999988643

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.68  E-value=3.8e-18  Score=136.64  Aligned_cols=92  Identities=24%  Similarity=0.295  Sum_probs=68.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.++.++.|+|||||||++|||++|+.|+.....     . ..         +.+.+........+..++..+.+
T Consensus       183 ~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~-----~-~~---------~~~~i~~~~~~~~~~~~~~~l~~  247 (287)
T d1opja_         183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----L-SQ---------VYELLEKDYRMERPEGCPEKVYE  247 (287)
T ss_dssp             CCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC-----H-HH---------HHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             cChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch-----H-HH---------HHHHHhcCCCCCCCccchHHHHH
Confidence            799999999999999999999999999997776532111     0 11         11122222222333445568999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      |+.+||+.||++||++.+|++.|+...
T Consensus       248 li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         248 LMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            999999999999999999999998754

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.8e-18  Score=136.53  Aligned_cols=90  Identities=17%  Similarity=0.185  Sum_probs=66.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+..++.++|||||||++|||++ |+.||....      ..+.....         .......+.+...+..+.
T Consensus       181 ~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~------~~~~~~~i---------~~~~~~~~~~~~~~~~l~  245 (273)
T d1u46a_         181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN------GSQILHKI---------DKEGERLPRPEDCPQDIY  245 (273)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHH---------HTSCCCCCCCTTCCHHHH
T ss_pred             CCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcC------HHHHHHHH---------HhCCCCCCCcccccHHHH
Confidence            69999999999999999999999999998 899985321      11111111         111122222333445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      +|+.+||+.||++||+|.+|++.|+.
T Consensus       246 ~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         246 NVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            99999999999999999999999875

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=7e-18  Score=136.58  Aligned_cols=92  Identities=23%  Similarity=0.241  Sum_probs=66.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++..+.++.++|||||||++|||++|+.|+......  ......+.    .+         .....+..++..+.+
T Consensus       201 ~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~--~~~~~~i~----~g---------~~~~~p~~~~~~l~~  265 (311)
T d1r0pa_         201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYLL----QG---------RRLLQPEYCPDPLYE  265 (311)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------CHHHHH----TT---------CCCCCCTTCCHHHHH
T ss_pred             cChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH--HHHHHHHH----cC---------CCCCCcccCcHHHHH
Confidence            6899999999999999999999999999988877532211  11111111    11         111222334457999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      |+.+||+.||++||+|.+|++.|+...
T Consensus       266 li~~cl~~dP~~RPs~~ei~~~L~~i~  292 (311)
T d1r0pa_         266 VMLKCWHPKAEMRPSFSELVSRISAIF  292 (311)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            999999999999999999999998753

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=8e-18  Score=133.70  Aligned_cols=90  Identities=24%  Similarity=0.335  Sum_probs=67.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||++|||++ |..||.......   +..    ....+         ...+.+..++..+.
T Consensus       176 ~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~---~~~----~i~~~---------~~~~~~~~~~~~~~  239 (273)
T d1mp8a_         176 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIG----RIENG---------ERLPMPPNCPPTLY  239 (273)
T ss_dssp             CCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----HHHTT---------CCCCCCTTCCHHHH
T ss_pred             chhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH---HHH----HHHcC---------CCCCCCCCCCHHHH
Confidence            79999999999999999999999999998 788886432211   111    11111         11122334456899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +|+.+||+.||++||++.+|++.|+.+
T Consensus       240 ~li~~cl~~dp~~Rps~~ei~~~L~~i  266 (273)
T d1mp8a_         240 SLMTKCWAYDPSRRPRFTELKAQLSTI  266 (273)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            999999999999999999999998764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1e-17  Score=134.07  Aligned_cols=93  Identities=25%  Similarity=0.283  Sum_probs=67.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++..+.++.++|||||||++|||++|+.|+.....     ..+.. ..         +......+.+..++..+.+
T Consensus       181 ~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~-----~~~~~-~~---------i~~~~~~~~~~~~~~~l~~  245 (285)
T d1fmka3         181 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVL-DQ---------VERGYRMPCPPECPESLHD  245 (285)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHH-HH---------HHTTCCCCCCTTSCHHHHH
T ss_pred             cChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCC-----HHHHH-HH---------HHhcCCCCCCcccCHHHHH
Confidence            699999999999999999999999999997766532111     11111 11         1111122233445568999


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcCCC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGSSN  108 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~~~  108 (214)
                      ++.+||+.+|++||+|.+|+.+|+....
T Consensus       246 li~~cl~~dP~~Rps~~~i~~~L~~~~~  273 (285)
T d1fmka3         246 LMCQCWRKEPEERPTFEYLQAFLEDYFT  273 (285)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             HHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence            9999999999999999999999997543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=6.4e-18  Score=135.99  Aligned_cols=90  Identities=30%  Similarity=0.369  Sum_probs=66.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.|+.|+|||||||++|||++ |..||.....       ..+....         ..+.....+...+..+.
T Consensus       204 ~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~-------~~~~~~i---------~~~~~~~~p~~~~~~l~  267 (299)
T d1fgka_         204 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-------EELFKLL---------KEGHRMDKPSNCTNELY  267 (299)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHH---------HTTCCCCCCSSCCHHHH
T ss_pred             hhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH-------HHHHHHH---------HcCCCCCCCccchHHHH
Confidence            69999999999999999999999999998 6777742211       1111111         11122222333445799


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +|+.+||+.+|.+||++.+|++.|+++
T Consensus       268 ~li~~cl~~dP~~Rps~~eil~~L~~i  294 (299)
T d1fgka_         268 MMMRDCWHAVPSQRPTFKQLVEDLDRI  294 (299)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            999999999999999999999999865

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.3e-17  Score=134.69  Aligned_cols=91  Identities=22%  Similarity=0.234  Sum_probs=66.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCC-CCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKN-NMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      +|||.+..+.++.++|||||||++|||++|.. ||....      ..+.          ...+..+.....+..++..+.
T Consensus       193 ~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~------~~~~----------~~~i~~~~~~~~~~~~~~~~~  256 (309)
T d1fvra_         193 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT------CAEL----------YEKLPQGYRLEKPLNCDDEVY  256 (309)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHH----------HHHGGGTCCCCCCTTBCHHHH
T ss_pred             cchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCC------HHHH----------HHHHHhcCCCCCCccCCHHHH
Confidence            68999999999999999999999999999765 553211      1111          111111122233334456899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +|+.+||+.||++||+|.+|++.|+++.
T Consensus       257 ~li~~cl~~dP~~RPs~~eil~~L~~i~  284 (309)
T d1fvra_         257 DLMRQCWREKPYERPSFAQILVSLNRML  284 (309)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            9999999999999999999999988754

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.5e-17  Score=133.74  Aligned_cols=91  Identities=30%  Similarity=0.306  Sum_probs=65.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCC-CCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGK-NNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.++.++.++|||||||++|||++|. .||......      ......         +..+.....+..++..+.
T Consensus       203 ~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~------~~~~~~---------~~~~~~~~~~~~~~~~l~  267 (299)
T d1ywna1         203 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCRR---------LKEGTRMRAPDYTTPEMY  267 (299)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS------HHHHHH---------HHHTCCCCCCTTCCHHHH
T ss_pred             cchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH------HHHHHH---------HhcCCCCCCCccCCHHHH
Confidence            7999999999999999999999999999865 566432211      111111         111111222333445789


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +++.+||+.||++||++.+|++.|+.+
T Consensus       268 ~li~~cl~~dP~~Rpt~~eil~~L~~i  294 (299)
T d1ywna1         268 QTMLDCWHGEPSQRPTFSELVEHLGNL  294 (299)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            999999999999999999999999854

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.6e-17  Score=134.34  Aligned_cols=91  Identities=24%  Similarity=0.390  Sum_probs=65.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCC-CCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNN-MSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++..+.++.++|||||||++|||++++.| +......      ..         +.+++..+.....+...+..+.
T Consensus       214 ~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~------~~---------~~~~i~~~~~~~~~~~~~~~l~  278 (311)
T d1t46a_         214 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD------SK---------FYKMIKEGFRMLSPEHAPAEMY  278 (311)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS------HH---------HHHHHHHTCCCCCCTTSCHHHH
T ss_pred             cCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHH------HH---------HHHHHhcCCCCCCcccccHHHH
Confidence            689999999999999999999999999995444 4322111      11         1111222222222333455899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      +|+.+||+.||++||+|.+|+++|++.
T Consensus       279 ~Li~~cl~~dP~~RPs~~~il~~L~~~  305 (311)
T d1t46a_         279 DIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (311)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            999999999999999999999999863

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=3.8e-17  Score=129.59  Aligned_cols=85  Identities=18%  Similarity=0.224  Sum_probs=62.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.....      .+.... ...+..         ...+...+..+.+
T Consensus       181 ~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~------~~~~~~-i~~~~~---------~~~~~~~s~~l~~  244 (269)
T d2java1         181 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ------KELAGK-IREGKF---------RRIPYRYSDELNE  244 (269)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHH-HHHTCC---------CCCCTTSCHHHHH
T ss_pred             CCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH------HHHHHH-HHcCCC---------CCCCcccCHHHHH
Confidence            799999999999999999999999999999999953211      111111 111111         1112223447899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.||.+||++.++++
T Consensus       245 li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         245 IITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHcCCChhHCcCHHHHHh
Confidence            999999999999999999874

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=6.3e-17  Score=130.66  Aligned_cols=91  Identities=23%  Similarity=0.314  Sum_probs=66.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCC-CCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGK-NNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||.+.++.++.++|||||||++|||++|+ .||....      ..+..... ..+.         ....+..++..+.
T Consensus       202 ~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~------~~~~~~~i-~~~~---------~~~~p~~~~~~l~  265 (308)
T d1p4oa_         202 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS------NEQVLRFV-MEGG---------LLDKPDNCPDMLF  265 (308)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------HHHHHHHH-HTTC---------CCCCCTTCCHHHH
T ss_pred             CCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCC------HHHHHHHH-HhCC---------CCCCcccchHHHH
Confidence            6899999999999999999999999999975 5553211      11111111 1111         1122333445899


Q ss_pred             HHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           80 KIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      +++.+||+.+|++||+|.+|++.|++..
T Consensus       266 ~li~~cl~~~P~~RPs~~~il~~L~~~~  293 (308)
T d1p4oa_         266 ELMRMCWQYNPKMRPSFLEIISSIKEEM  293 (308)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            9999999999999999999999998753

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=9.4e-17  Score=129.34  Aligned_cols=103  Identities=21%  Similarity=0.157  Sum_probs=67.3

Q ss_pred             CcccccccC------CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCc--------hhHHHHHHhhcCccccccCCcc
Q 028061            1 MAPEYALWG------YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC--------PLDWAFHLHQSGTLMEFVDPRL   66 (214)
Q Consensus         1 mAPE~~~~~------~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~   66 (214)
                      ||||++...      .++.|+|||||||++|||++|..|+..........        .........    .....++.+
T Consensus       179 ~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~  254 (303)
T d1vjya_         179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV----CEQKLRPNI  254 (303)
T ss_dssp             CCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH----TTSCCCCCC
T ss_pred             CChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHH----hccccCCCC
Confidence            799998743      36889999999999999999988775432221110        011111111    111222222


Q ss_pred             CCCC-CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHhcCC
Q 028061           67 GSEF-NKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSS  107 (214)
Q Consensus        67 ~~~~-~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~~~  107 (214)
                      .... .......+.+|+.+||+.||++||+|.+|++.|+.+.
T Consensus       255 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~  296 (303)
T d1vjya_         255 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             CGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            1111 2345567999999999999999999999999998643

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=3.5e-16  Score=123.58  Aligned_cols=84  Identities=21%  Similarity=0.250  Sum_probs=62.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.....      .... ......        ..  ..+...+..+.+
T Consensus       171 ~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~-~~i~~~--------~~--~~p~~~s~~~~~  233 (263)
T d2j4za1         171 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------QETY-KRISRV--------EF--TFPDFVTEGARD  233 (263)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHH-HHHHTT--------CC--CCCTTSCHHHHH
T ss_pred             cCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH------HHHH-HHHHcC--------CC--CCCccCCHHHHH
Confidence            799999999999999999999999999999999953211      1111 111111        11  112223457889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.||++||++.++++
T Consensus       234 li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         234 LISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHccCCHhHCcCHHHHHc
Confidence            999999999999999999985

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=5.4e-16  Score=122.92  Aligned_cols=86  Identities=24%  Similarity=0.392  Sum_probs=59.2

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++. +.++.++|||||||++|||++|+.||.....     ... .......+..     +   ...+......+.+
T Consensus       180 ~aPE~~~-~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~-----~~~-~~~~i~~~~~-----~---~~~~~~~~~~~~~  244 (270)
T d1t4ha_         180 MAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQ-IYRRVTSGVK-----P---ASFDKVAIPEVKE  244 (270)
T ss_dssp             CCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHH-HHHHHTTTCC-----C---GGGGGCCCHHHHH
T ss_pred             cCHHHhC-CCCCCcCchhhHHHHHHHHHHCCCCCCCccc-----HHH-HHHHHHcCCC-----C---cccCccCCHHHHH
Confidence            7999886 4699999999999999999999999953211     111 1111111110     0   0111112336889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.||++||++.++++
T Consensus       245 li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         245 IIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHccCCHhHCcCHHHHhC
Confidence            999999999999999999975

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.53  E-value=8e-15  Score=117.40  Aligned_cols=96  Identities=11%  Similarity=0.035  Sum_probs=64.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||.+.+..++.++|||||||+++|+++|+.||........................     +.....    ++..+.+
T Consensus       180 ~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~p~~~~~  250 (299)
T d1ckia_         180 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----EVLCKG----YPSEFAT  250 (299)
T ss_dssp             CCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCH-----HHHTTT----SCHHHHH
T ss_pred             cCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCCh-----hHhccC----CCHHHHH
Confidence            7999999889999999999999999999999999654333222111111000000000     001112    2347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhc
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEG  105 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~  105 (214)
                      ++.+||+.+|++||++.++.+.|+.
T Consensus       251 li~~cl~~~p~~RP~~~~i~~~l~~  275 (299)
T d1ckia_         251 YLNFCRSLRFDDKPDYSYLRQLFRN  275 (299)
T ss_dssp             HHHHHHHSCTTCCCCHHHHHHHHHH
T ss_pred             HHHHHccCChhHCcCHHHHHHHHHH
Confidence            9999999999999999998887775

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.52  E-value=7.6e-16  Score=124.31  Aligned_cols=86  Identities=27%  Similarity=0.386  Sum_probs=60.2

Q ss_pred             Cccccccc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHH
Q 028061            1 MAPEYALW---GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAER   77 (214)
Q Consensus         1 mAPE~~~~---~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
                      ||||++.+   +.|+.++|||||||++|||++|+.||....      ............      .+..   .+...+..
T Consensus       178 ~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~------~~~~~~~i~~~~------~~~~---~~~~~s~~  242 (309)
T d1u5ra_         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNE------SPAL---QSGHWSEY  242 (309)
T ss_dssp             CCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSC------CCCC---SCTTSCHH
T ss_pred             cCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCC------CCCC---CCCCCCHH
Confidence            79999863   568999999999999999999999985321      111111111111      1111   11123347


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHH
Q 028061           78 MIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        78 ~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +.+|+.+||+.||.+||++.++++
T Consensus       243 ~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         243 FRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHCcCChhHCcCHHHHHh
Confidence            899999999999999999999975

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.51  E-value=9.8e-15  Score=115.75  Aligned_cols=93  Identities=22%  Similarity=0.296  Sum_probs=65.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||....      ..+............    +.   ......+..+.+
T Consensus       181 ~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~~~~~~~~~~~----~~---~~~~~~s~~l~~  247 (277)
T d1o6ya_         181 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS------PVSVAYQHVREDPIP----PS---ARHEGLSADLDA  247 (277)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHCCCCC----GG---GTSSSCCHHHHH
T ss_pred             cCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcC------HHHHHHHHHhcCCCC----Cc---hhccCCCHHHHH
Confidence            79999999999999999999999999999999996321      111121211111111    00   011122347889


Q ss_pred             HHHHhhccCCCCCC-CHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRP-TMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RP-s~~~v~~~L~~~  106 (214)
                      ++.+||+.||.+|| ++.+++..|.+.
T Consensus       248 li~~~L~~dp~~R~~sa~~l~~~l~r~  274 (277)
T d1o6ya_         248 VVLKALAKNPENRYQTAAEMRADLVRV  274 (277)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence            99999999999999 899998887653

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.9e-15  Score=120.78  Aligned_cols=87  Identities=21%  Similarity=0.235  Sum_probs=60.8

Q ss_pred             Ccccccc-----cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHH
Q 028061            1 MAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEA   75 (214)
Q Consensus         1 mAPE~~~-----~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (214)
                      ||||++.     ...|+.++|||||||+++||++|+.||.......      ........ ..     +.  ...+...+
T Consensus       177 ~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~------~~~~i~~~-~~-----~~--~~~~~~~s  242 (288)
T d2jfla1         177 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR------VLLKIAKS-EP-----PT--LAQPSRWS  242 (288)
T ss_dssp             CCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG------HHHHHHHS-CC-----CC--CSSGGGSC
T ss_pred             CCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH------HHHHHHcC-CC-----CC--CCccccCC
Confidence            7999984     4568999999999999999999999996432111      11111111 00     01  11222344


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           76 ERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        76 ~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..+.+|+.+||+.||++||++.++++
T Consensus       243 ~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         243 SNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            57899999999999999999999875

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.8e-15  Score=119.92  Aligned_cols=87  Identities=18%  Similarity=0.145  Sum_probs=59.7

Q ss_pred             CcccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.+..+ +.++||||+||+++||++|+.||........    . ..... .        ...........+..+.
T Consensus       172 ~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~----~-~~~~~-~--------~~~~~~~~~~~s~~~~  237 (271)
T d1nvra_         172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ----E-YSDWK-E--------KKTYLNPWKKIDSAPL  237 (271)
T ss_dssp             SCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSH----H-HHHHH-T--------TCTTSTTGGGSCHHHH
T ss_pred             cCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHH----H-HHHHh-c--------CCCCCCccccCCHHHH
Confidence            79999987765 6789999999999999999999964322110    0 00010 0        0000011112334678


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +|+.+||+.||++||++.++++
T Consensus       238 ~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         238 ALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHcCCChhHCcCHHHHhc
Confidence            8999999999999999999865

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=5.2e-15  Score=120.64  Aligned_cols=90  Identities=14%  Similarity=0.108  Sum_probs=62.9

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCc--cCCCCCHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPR--LGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~   78 (214)
                      ||||++.+..|+.++|||||||+++||++|+.||.........   .   .+     ...+....  +........+..+
T Consensus       180 ~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~---~---~~-----~~~i~~~~~~~~~~~~~~~s~~~  248 (335)
T d2ozaa1         180 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---P---GM-----KTRIRMGQYEFPNPEWSEVSEEV  248 (335)
T ss_dssp             CCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-------------------CCCSCSSSCCTTHHHHSCHHH
T ss_pred             CCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHH---H---HH-----HHHHhcCCCCCCCcccccCCHHH
Confidence            7999999999999999999999999999999999643222100   0   00     00111111  1111112345678


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHH
Q 028061           79 IKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .+|+.+||+.||++||++.+++.
T Consensus       249 ~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         249 KMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHccCChhHCcCHHHHHc
Confidence            99999999999999999999987

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.51  E-value=1.7e-15  Score=122.19  Aligned_cols=89  Identities=16%  Similarity=0.132  Sum_probs=63.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.....      ........ .+.      .....+.....+..+.+
T Consensus       176 ~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~------~~~~~~i~-~~~------~~~~~~~~~~~s~~~~~  242 (307)
T d1a06a_         176 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND------AKLFEQIL-KAE------YEFDSPYWDDISDSAKD  242 (307)
T ss_dssp             SCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHH-TTC------CCCCTTTTTTSCHHHHH
T ss_pred             cCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH------HHHHHHHh-ccC------CCCCCccccCCCHHHHH
Confidence            799999999999999999999999999999999963211      11111111 110      01111112223447899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      |+.+||+.||++||++.++++.
T Consensus       243 li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         243 FIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHccCCHhHCcCHHHHhcC
Confidence            9999999999999999999873

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.5e-15  Score=120.41  Aligned_cols=87  Identities=21%  Similarity=0.300  Sum_probs=62.6

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.++.++.++|||||||+++||++|+.||.....      ..........+.      +.  ...+...+..+.+
T Consensus       183 ~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~------~~~~~~~~~~~~------~~--~~~~~~~s~~~~~  248 (293)
T d1yhwa1         183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP------LRALYLIATNGT------PE--LQNPEKLSAIFRD  248 (293)
T ss_dssp             CCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHHCS------CC--CSSGGGSCHHHHH
T ss_pred             cChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCH------HHHHHHHHhCCC------CC--CCCcccCCHHHHH
Confidence            799999999999999999999999999999999953211      111111111110      11  1122334457899


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.||++||++.++++
T Consensus       249 li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         249 FLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999975

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=4.3e-15  Score=118.83  Aligned_cols=88  Identities=17%  Similarity=0.197  Sum_probs=61.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||.....      .+..... ....      .......+...+..+.+
T Consensus       183 ~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~------~~~~~~i-~~~~------~~~~~~~~~~~s~~~~~  249 (293)
T d1jksa_         183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANV-SAVN------YEFEDEYFSNTSALAKD  249 (293)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HTTC------CCCCHHHHTTSCHHHHH
T ss_pred             cCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCH------HHHHHHH-HhcC------CCCCchhcCCCCHHHHH
Confidence            799999999999999999999999999999999963211      1111111 1110      00000011122347889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.||++||++.++++
T Consensus       250 li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         250 FIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999986

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=5.4e-15  Score=118.65  Aligned_cols=98  Identities=19%  Similarity=0.174  Sum_probs=62.1

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---------ccc-cccCCcc---C
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---------TLM-EFVDPRL---G   67 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~~~~~~---~   67 (214)
                      ||||++.+..++.++||||+||+++||++|+.||.......   ............         ... .......   .
T Consensus       182 ~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
T d1blxa_         182 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPI  258 (305)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCG
T ss_pred             cCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHH---HHHHHHHhhCCCchhcccccccchhhhhccccccch
Confidence            79999999999999999999999999999999996432111   000010100000         000 0000000   0


Q ss_pred             CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 SEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ..........+.+|+.+||+.||++|||+.++++
T Consensus       259 ~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         259 EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             GGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            0111123346788999999999999999999976

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=3e-15  Score=119.63  Aligned_cols=83  Identities=11%  Similarity=0.097  Sum_probs=60.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++||||+||+++||++|+.||.....      ......         +.....  ..+......+.+
T Consensus       177 ~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~------~~~~~~---------i~~~~~--~~p~~~s~~~~~  239 (288)
T d1uu3a_         177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE------YLIFQK---------IIKLEY--DFPEKFFPKARD  239 (288)
T ss_dssp             CCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH---------HHTTCC--CCCTTCCHHHHH
T ss_pred             cCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH------HHHHHH---------HHcCCC--CCCccCCHHHHH
Confidence            799999999999999999999999999999999963211      111111         111111  112223447889


Q ss_pred             HHHHhhccCCCCCCCHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVV  100 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~  100 (214)
                      |+.+||+.||.+||++.+++
T Consensus       240 li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         240 LVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             HHHTTSCSSGGGSTTSGGGT
T ss_pred             HHHHHccCCHhHCcCHHHHc
Confidence            99999999999999999874

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.5e-14  Score=117.17  Aligned_cols=36  Identities=22%  Similarity=0.403  Sum_probs=34.3

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY   36 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~   36 (214)
                      ||||++.+..|+.++||||+||+++||++|+.||..
T Consensus       170 ~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~  205 (322)
T d1s9ja_         170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  205 (322)
T ss_dssp             CCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSC
T ss_pred             cCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            799999999999999999999999999999999964

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.43  E-value=2.2e-14  Score=117.51  Aligned_cols=89  Identities=20%  Similarity=0.135  Sum_probs=62.7

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++||||+||+++||++|+.||.....      .+...... ...      ...........+..+.+
T Consensus       192 ~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~-~~~------~~~~~~~~~~~s~~~~~  258 (350)
T d1koaa2         192 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND------DETLRNVK-SCD------WNMDDSAFSGISEDGKD  258 (350)
T ss_dssp             CCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-HTC------CCSCCGGGGGCCHHHHH
T ss_pred             cCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH------HHHHHHHH-hCC------CCCCcccccCCCHHHHH
Confidence            799999999999999999999999999999999953211      11111111 000      00111111223447889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      |+.+||+.||++||++.++++.
T Consensus       259 li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         259 FIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHHHHCCSSGGGSCCHHHHHHS
T ss_pred             HHHHHccCChhHCcCHHHHhcC
Confidence            9999999999999999999874

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.41  E-value=3.3e-14  Score=116.51  Aligned_cols=89  Identities=15%  Similarity=0.158  Sum_probs=62.8

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++||||+||+++||++|+.||.....      ........ .+.      ...........+..+.+
T Consensus       195 ~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~i~-~~~------~~~~~~~~~~~s~~~~~  261 (352)
T d1koba_         195 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD------LETLQNVK-RCD------WEFDEDAFSSVSPEAKD  261 (352)
T ss_dssp             CCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHH-HCC------CCCCSSTTTTSCHHHHH
T ss_pred             cCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHH-hCC------CCCCcccccCCCHHHHH
Confidence            799999999999999999999999999999999953211      11111111 111      11111111223447889


Q ss_pred             HHHHhhccCCCCCCCHHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      |+.+||+.||.+||++.++++.
T Consensus       262 li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         262 FIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHccCChhHCcCHHHHhcC
Confidence            9999999999999999999863

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.41  E-value=1.6e-13  Score=109.54  Aligned_cols=97  Identities=16%  Similarity=0.123  Sum_probs=66.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||.+.+..++.++|||||||+++||++|+.||..............+..........+     +...+    +.++..
T Consensus       180 ~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~-----l~~~~----p~~l~~  250 (293)
T d1csna_         180 MSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE-----LCAGF----PEEFYK  250 (293)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH-----HTTTS----CHHHHH
T ss_pred             cCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHH-----hcCCC----CHHHHH
Confidence            799999999999999999999999999999999964433321111111111110000111     11122    347899


Q ss_pred             HHHHhhccCCCCCCCHHHHHHHHhcC
Q 028061           81 IALLCTNASPSLRPTMSEVVSMLEGS  106 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~~L~~~  106 (214)
                      ++..||..+|++||++..+.+.|+..
T Consensus       251 ii~~~~~~~~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         251 YMHYARNLAFDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             HHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            99999999999999999888877653

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=5.2e-14  Score=111.36  Aligned_cols=78  Identities=21%  Similarity=0.341  Sum_probs=57.7

Q ss_pred             CcccccccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~~~~-t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++....+ +.++||||+||+++||++|+.||....            ... .+.      ......    .+.++.
T Consensus       176 ~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------------~i~-~~~------~~~~~~----~s~~~~  232 (273)
T d1xwsa_         176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EII-RGQ------VFFRQR----VSSECQ  232 (273)
T ss_dssp             SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHH-HCC------CCCSSC----CCHHHH
T ss_pred             CCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch------------HHh-hcc------cCCCCC----CCHHHH
Confidence            79999987655 677999999999999999999985210            010 010      011112    234788


Q ss_pred             HHHHHhhccCCCCCCCHHHHHH
Q 028061           80 KIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +|+.+||+.||++||++.++++
T Consensus       233 ~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         233 HLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHccCCHhHCcCHHHHhc
Confidence            9999999999999999999976

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.38  E-value=2.4e-13  Score=111.82  Aligned_cols=87  Identities=15%  Similarity=0.127  Sum_probs=59.8

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHH
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMI   79 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (214)
                      ||||++.. ..++.++|||||||+++||++|+.||.......   ..... ..        .....  ...+...+..+.
T Consensus       172 ~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~~~~~-~~--------~~~~~--~~~~~~~s~~~~  237 (364)
T d1omwa3         172 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEID-RM--------TLTMA--VELPDSFSPELR  237 (364)
T ss_dssp             CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC---HHHHH-HH--------SSSCC--CCCCSSSCHHHH
T ss_pred             chhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH---HHHHH-Hh--------cccCC--CCCCCCCCHHHH
Confidence            79999975 468999999999999999999999996433221   11100 00        00000  111222334789


Q ss_pred             HHHHHhhccCCCCCCC-----HHHHHH
Q 028061           80 KIALLCTNASPSLRPT-----MSEVVS  101 (214)
Q Consensus        80 ~l~~~C~~~~p~~RPs-----~~~v~~  101 (214)
                      +|+.+||+.||.+||+     +.++++
T Consensus       238 ~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         238 SLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             HHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             HHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            9999999999999999     577764

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=9.9e-14  Score=110.96  Aligned_cols=98  Identities=13%  Similarity=0.138  Sum_probs=60.4

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC---ccc------cccCCccCCCC
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG---TLM------EFVDPRLGSEF   70 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~~~   70 (214)
                      ||||++..+ .++.++|||||||+++||++|+.||......+   ....+.......   ...      ....-......
T Consensus       167 ~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~---~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (299)
T d1ua2a_         167 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD---QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI  243 (299)
T ss_dssp             CCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCC
T ss_pred             ccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH---HHHHHHHhcCCCChhhccchhccchhhhhccCCCC
Confidence            799998754 67999999999999999999999985322111   111111110000   000      00000000111


Q ss_pred             CH-----HHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           71 NK-----VEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        71 ~~-----~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +.     .....+.+|+.+||+.||++|||+.++++
T Consensus       244 ~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         244 PLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             CHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             ChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence            11     12347899999999999999999999986

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=3.9e-14  Score=114.62  Aligned_cols=83  Identities=17%  Similarity=0.247  Sum_probs=60.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.++.++.++|||||||+++||++|+.||.....      ....... ..+      .+    ..+...+..+.+
T Consensus       170 ~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~i-~~~------~~----~~p~~~s~~~~d  232 (320)
T d1xjda_         170 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE------EELFHSI-RMD------NP----FYPRWLEKEAKD  232 (320)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HHC------CC----CCCTTSCHHHHH
T ss_pred             CCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCH------HHHHHHH-HcC------CC----CCCccCCHHHHH
Confidence            799999999999999999999999999999999963211      1111111 111      11    112223447899


Q ss_pred             HHHHhhccCCCCCCCHH-HHH
Q 028061           81 IALLCTNASPSLRPTMS-EVV  100 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~-~v~  100 (214)
                      |+.+||+.||.+||++. +|+
T Consensus       233 li~~~L~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         233 LLVKLFVREPEKRLGVRGDIR  253 (320)
T ss_dssp             HHHHHSCSSGGGSBTTBSCGG
T ss_pred             HHHHhcccCCCCCcCHHHHHH
Confidence            99999999999999985 664

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.35  E-value=8.1e-14  Score=112.55  Aligned_cols=84  Identities=17%  Similarity=0.147  Sum_probs=60.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++||||+||+++||++|+.||.....      ........ .+.      .    ..+...+..+.+
T Consensus       168 ~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~------~~~~~~i~-~~~------~----~~p~~~s~~~~~  230 (316)
T d1fota_         168 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEKIL-NAE------L----RFPPFFNEDVKD  230 (316)
T ss_dssp             CCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHH-HCC------C----CCCTTSCHHHHH
T ss_pred             cCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH------HHHHHHHH-cCC------C----CCCCCCCHHHHH
Confidence            799999998999999999999999999999999963211      11111111 110      1    112223347889


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      ++.+||+.||.+|+     ++.++++
T Consensus       231 li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         231 LLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHhhhCHHhccccchhhHHHHHc
Confidence            99999999999996     8888875

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.34  E-value=8.4e-14  Score=113.99  Aligned_cols=84  Identities=17%  Similarity=0.186  Sum_probs=60.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..++.++|||||||+++||++|+.||....      ......... .+.      .    ..+...+..+.+
T Consensus       205 ~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~------~~~~~~~i~-~~~------~----~~p~~~s~~~~~  267 (350)
T d1rdqe_         205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ------PIQIYEKIV-SGK------V----RFPSHFSSDLKD  267 (350)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH-HCC------C----CCCTTCCHHHHH
T ss_pred             CCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcC------HHHHHHHHh-cCC------C----CCCccCCHHHHH
Confidence            79999999999999999999999999999999995321      111111111 110      1    112223347889


Q ss_pred             HHHHhhccCCCCCC-----CHHHHHH
Q 028061           81 IALLCTNASPSLRP-----TMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RP-----s~~~v~~  101 (214)
                      ++.+||+.||.+|+     ++.++++
T Consensus       268 li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         268 LLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHhhhCHHhccccccccHHHHHc
Confidence            99999999999994     8888875

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.8e-13  Score=111.41  Aligned_cols=84  Identities=18%  Similarity=0.143  Sum_probs=60.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||++.+..|+.++||||+||+++||++|+.||.....      .... .....+.      .    .+|...+..+.+
T Consensus       172 ~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~------~~~~-~~i~~~~------~----~~p~~~s~~~~d  234 (337)
T d1o6la_         172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------ERLF-ELILMEE------I----RFPRTLSPEAKS  234 (337)
T ss_dssp             CCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHH-HHHHHCC------C----CCCTTSCHHHHH
T ss_pred             hhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH------HHHH-HHHhcCC------C----CCCccCCHHHHH
Confidence            799999999999999999999999999999999964221      1111 1111111      1    122223447889


Q ss_pred             HHHHhhccCCCCCCC-----HHHHHH
Q 028061           81 IALLCTNASPSLRPT-----MSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs-----~~~v~~  101 (214)
                      |+.+||+.||.+|++     +.++++
T Consensus       235 li~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         235 LLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHhhccCCchhhcccccccHHHHHc
Confidence            999999999999995     777764

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=3.3e-13  Score=108.66  Aligned_cols=99  Identities=15%  Similarity=0.086  Sum_probs=59.3

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC--c---------cccccCCccCC
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG--T---------LMEFVDPRLGS   68 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~~~~   68 (214)
                      +|||++... .++.++|||||||+++||++|+.||.......   ............  .         ....+......
T Consensus       188 ~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (318)
T d3blha1         188 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH---QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQ  264 (318)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTCCCC-------CCSSC
T ss_pred             hhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHH---HHHHHHHhcCCCChhhccccchhhhhhhhcccccc
Confidence            689998754 68999999999999999999999986322110   001111110000  0         00000000000


Q ss_pred             CCCH-H------HHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           69 EFNK-V------EAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        69 ~~~~-~------~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      .... .      ....+.+|+.+||+.||++||++.++++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         265 KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             CBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence            1111 1      12356789999999999999999999864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.1e-13  Score=111.91  Aligned_cols=88  Identities=17%  Similarity=0.145  Sum_probs=61.0

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHHHH
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERMIK   80 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
                      ||||.+.+..++.++||||+||+++||++|+.||.....      .+....... +...  .+...    ....+..+.+
T Consensus       170 ~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~------~~~~~~i~~-~~~~--~~~~~----~~~~s~~~~~  236 (321)
T d1tkia_         170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN------QQIIENIMN-AEYT--FDEEA----FKEISIEAMD  236 (321)
T ss_dssp             SCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHH-TCCC--CCHHH----HTTSCHHHHH
T ss_pred             ccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh-CCCC--CChhh----ccCCCHHHHH
Confidence            689999889999999999999999999999999963221      111111110 0000  00000    0112346889


Q ss_pred             HHHHhhccCCCCCCCHHHHHH
Q 028061           81 IALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        81 l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      |+.+||+.||.+||++.++++
T Consensus       237 li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         237 FVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999986

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.30  E-value=9e-13  Score=104.57  Aligned_cols=98  Identities=19%  Similarity=0.211  Sum_probs=59.4

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC------------cccccc---CC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG------------TLMEFV---DP   64 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~---~~   64 (214)
                      +|||.+.. ..++.++||||+||+++||++|+.||.......   ............            ......   .+
T Consensus       167 ~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (286)
T d1ob3a_         167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD---QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP  243 (286)
T ss_dssp             CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCC
T ss_pred             hhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHH---HHHHHHHhhCCCChhhccchhhhhhcccccccccC
Confidence            58998864 567999999999999999999999996432110   000000000000            000000   00


Q ss_pred             ccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           65 RLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        65 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .............+.+|+.+||+.||++||+++++++
T Consensus       244 ~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             CCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0000111122347889999999999999999999974

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.28  E-value=2e-13  Score=108.19  Aligned_cols=88  Identities=18%  Similarity=0.207  Sum_probs=59.7

Q ss_pred             Cccccccc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHH
Q 028061            1 MAPEYALW------GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVE   74 (214)
Q Consensus         1 mAPE~~~~------~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (214)
                      +|||++..      ..++.++||||+||+++||++|+.||.....      .. .......+..      ..........
T Consensus       176 ~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~------~~-~~~~i~~~~~------~~~~~~~~~~  242 (277)
T d1phka_         176 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------ML-MLRMIMSGNY------QFGSPEWDDY  242 (277)
T ss_dssp             CCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHTCC------CCCTTTGGGS
T ss_pred             CCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCH------HH-HHHHHHhCCC------CCCCcccccC
Confidence            58888762      3578899999999999999999999964221      11 1111111111      0111112234


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           75 AERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        75 ~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      +..+.+|+.+||+.+|++||++.+|++
T Consensus       243 s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         243 SDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            457899999999999999999999875

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.26  E-value=5.7e-12  Score=102.80  Aligned_cols=102  Identities=19%  Similarity=0.157  Sum_probs=63.4

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHH----HHHh-------hc----------Cccc
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWA----FHLH-------QS----------GTLM   59 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~----~~~~-------~~----------~~~~   59 (214)
                      +|||.+....++.++||||+||+++|+++|+.||............+..    ..+.       ..          ....
T Consensus       196 ~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  275 (362)
T d1q8ya_         196 RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLL  275 (362)
T ss_dssp             CCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CB
T ss_pred             cChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhh
Confidence            6999999999999999999999999999999998643322211111110    0000       00          0000


Q ss_pred             cccCCc----------cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           60 EFVDPR----------LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        60 ~~~~~~----------~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ..+...          ............+.+|+.+|+..||.+|||+.++++.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         276 RNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             SSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             hccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            000000          0112345567789999999999999999999999863

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.2e-12  Score=104.66  Aligned_cols=99  Identities=16%  Similarity=0.154  Sum_probs=59.2

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcC--c----ccc------ccCCccC
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSG--T----LME------FVDPRLG   67 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~----~~~------~~~~~~~   67 (214)
                      +|||.+... .++.++||||+||+++||++|+.||.......   ............  .    ...      .......
T Consensus       169 ~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (298)
T d1gz8a_         169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID---QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR  245 (298)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCC
T ss_pred             eehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH---HHHHHHHhcCCCchhhccccccccccccccccccc
Confidence            689987755 46899999999999999999999996322110   000000000000  0    000      0000000


Q ss_pred             CCC---CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           68 SEF---NKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        68 ~~~---~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ...   .......+.+|+.+||+.||++||++.++++.
T Consensus       246 ~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             CCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            000   01122468899999999999999999999874

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=7.8e-13  Score=106.94  Aligned_cols=88  Identities=16%  Similarity=0.201  Sum_probs=58.3

Q ss_pred             CcccccccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCccccccCCccCCCCCHHHHHHH
Q 028061            1 MAPEYALWG--YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTLMEFVDPRLGSEFNKVEAERM   78 (214)
Q Consensus         1 mAPE~~~~~--~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (214)
                      +|||.+...  .++.++||||+||+|+||++|+.||........  .........         ..  ....+......+
T Consensus       197 ~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~--~~~i~~~~~---------~~--~~~~~~~~s~~~  263 (322)
T d1vzoa_         197 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRIL---------KS--EPPYPQEMSALA  263 (322)
T ss_dssp             CCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHH---------HC--CCCCCTTSCHHH
T ss_pred             chhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcc---------cC--CCCCcccCCHHH
Confidence            588888643  578899999999999999999999965433221  111111110         00  011223345588


Q ss_pred             HHHHHHhhccCCCCCCC-----HHHHHH
Q 028061           79 IKIALLCTNASPSLRPT-----MSEVVS  101 (214)
Q Consensus        79 ~~l~~~C~~~~p~~RPs-----~~~v~~  101 (214)
                      .+|+.+||+.||++||+     +.++++
T Consensus       264 ~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         264 KDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             HHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             HHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            99999999999999995     678764

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.7e-12  Score=105.91  Aligned_cols=99  Identities=17%  Similarity=0.138  Sum_probs=59.9

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHH----------HHHhhcC----ccccccCCc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWA----------FHLHQSG----TLMEFVDPR   65 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~----------~~~~~~~----~~~~~~~~~   65 (214)
                      +|||.+.. ..++.++||||+||+++||++|+.||.......  .+....          +......    .+.......
T Consensus       189 ~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~--~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (350)
T d1q5ka_         189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP  266 (350)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH--HHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCC
T ss_pred             cChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHH--HHHHHHHHhCCChHHhhhhhccchhhccccccccCc
Confidence            68997764 578999999999999999999999995322111  000000          0000000    000000000


Q ss_pred             cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           66 LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        66 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ............+.+|+.+||+.||++|||+.++++
T Consensus       267 ~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             GGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            000111123346889999999999999999999985

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=6.8e-12  Score=102.50  Aligned_cols=102  Identities=18%  Similarity=0.088  Sum_probs=63.5

Q ss_pred             CcccccccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCc----------------hhHHHHHHhhcC------cc
Q 028061            1 MAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTC----------------PLDWAFHLHQSG------TL   58 (214)
Q Consensus         1 mAPE~~~~~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~----------------~~~~~~~~~~~~------~~   58 (214)
                      +|||++.+..++.++||||+||+++||++|+.||..........                ............      ..
T Consensus       185 ~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (355)
T d2b1pa1         185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTF  264 (355)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCH
T ss_pred             cChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccc
Confidence            69999999999999999999999999999999985322110000                000000000000      00


Q ss_pred             ccccCCccCC---CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           59 MEFVDPRLGS---EFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        59 ~~~~~~~~~~---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ..........   .........+.+|+.+|+..||++|||+.+|++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         265 PKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            0011111111   1122345678999999999999999999999853

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=1.4e-11  Score=100.12  Aligned_cols=103  Identities=17%  Similarity=0.164  Sum_probs=62.5

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhh--------cCc----------cccc
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQ--------SGT----------LMEF   61 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~--------~~~----------~~~~   61 (214)
                      ||||.+.+ ..++.++||||+||+++||++|+.||.......   ..........        ...          +.+.
T Consensus       185 ~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (346)
T d1cm8a_         185 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD---QLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL  261 (346)
T ss_dssp             CCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCC
T ss_pred             cCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHH---HHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcc
Confidence            69998875 467899999999999999999999996432110   0000000000        000          0000


Q ss_pred             cCCccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH--HhcCC
Q 028061           62 VDPRLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSM--LEGSS  107 (214)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~--L~~~~  107 (214)
                      ....+ ..........+.+|+.+||..||.+|||+.++++.  |+...
T Consensus       262 ~~~~~-~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         262 EKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             CCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             cccch-HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence            00000 01111223467899999999999999999999874  55443

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=4e-12  Score=100.73  Aligned_cols=99  Identities=14%  Similarity=0.109  Sum_probs=58.8

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc------cccccC---------C
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT------LMEFVD---------P   64 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---------~   64 (214)
                      +|||.+... .++.++||||+||+++||++|+.||......  ......+........      .....+         .
T Consensus       168 ~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (292)
T d1unla_         168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV--DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT  245 (292)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH--HHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTT
T ss_pred             hhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCH--HHHHHHHHhhcCCCChhhhhhhhhccccccccccccc
Confidence            478877755 4699999999999999999999987432111  111111111110000      000000         0


Q ss_pred             ccCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           65 RLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        65 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      .............+.+|+.+||+.||.+|||+.+|++
T Consensus       246 ~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         246 TSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             chhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0001112223346889999999999999999999975

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.6e-11  Score=99.91  Aligned_cols=99  Identities=14%  Similarity=0.121  Sum_probs=59.4

Q ss_pred             Cccccccc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCcc-----------cc-ccCCccC
Q 028061            1 MAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGTL-----------ME-FVDPRLG   67 (214)
Q Consensus         1 mAPE~~~~-~~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~   67 (214)
                      +|||++.. ..++.++||||+||+++||++|+.||........   .............           .. .......
T Consensus       179 ~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (345)
T d1pmea_         179 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ---LNHILGILGSPSQEDLNCIINLKARNYLLSLPHK  255 (345)
T ss_dssp             CCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCC
T ss_pred             chHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHH---HHHHhhhccCCChhhhhhhhhhhhhcccccCCcc
Confidence            68999854 5678999999999999999999999964321110   0000000000000           00 0000000


Q ss_pred             CCCCH-----HHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 028061           68 SEFNK-----VEAERMIKIALLCTNASPSLRPTMSEVVSM  102 (214)
Q Consensus        68 ~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  102 (214)
                      ...+.     .....+.+|+.+||+.||.+||++.++++.
T Consensus       256 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         256 NKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             CCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            01111     112368899999999999999999999863

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.08  E-value=2.3e-11  Score=98.08  Aligned_cols=101  Identities=13%  Similarity=0.103  Sum_probs=60.3

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCch-h-H-----HHHHHhhcCc------cccccCCc-
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCP-L-D-----WAFHLHQSGT------LMEFVDPR-   65 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~-~-~-----~~~~~~~~~~------~~~~~~~~-   65 (214)
                      +|||.+... .++.++||||+||+++|+++|+.||........... . .     ..........      ........ 
T Consensus       196 ~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (328)
T d3bqca1         196 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHS  275 (328)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCC
T ss_pred             cCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhccccc
Confidence            689988754 579999999999999999999999864322110000 0 0     0000000000      00000000 


Q ss_pred             -------cCCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           66 -------LGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        66 -------~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                             ...........++.+|+.+|+..||++|||+.++++
T Consensus       276 ~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         276 RKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                   011111223346889999999999999999999975

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=1.3e-10  Score=94.14  Aligned_cols=98  Identities=14%  Similarity=0.145  Sum_probs=58.5

Q ss_pred             CcccccccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHhhcCc-----------cccccCCc-cC
Q 028061            1 MAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHQSGT-----------LMEFVDPR-LG   67 (214)
Q Consensus         1 mAPE~~~~~-~~t~ksDVySfGivl~Ei~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-~~   67 (214)
                      +|||.+... .++.++||||+||+++||++|+.||......   .....+........           ........ ..
T Consensus       185 ~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (348)
T d2gfsa1         185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI---DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM  261 (348)
T ss_dssp             SCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCC
T ss_pred             cCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccC
Confidence            689976654 5689999999999999999999999532111   00010000000000           00000000 00


Q ss_pred             CCCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 028061           68 SEFN-----KVEAERMIKIALLCTNASPSLRPTMSEVVS  101 (214)
Q Consensus        68 ~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  101 (214)
                      ....     ......+.+|+.+|++.||.+|||+.++++
T Consensus       262 ~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         262 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             CCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence            0000     012346789999999999999999999986

>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase IIC1, domain C2a
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.58  E-value=0.014  Score=42.29  Aligned_cols=42  Identities=7%  Similarity=-0.103  Sum_probs=35.0

Q ss_pred             CCCccccccCCccCCCCC----CccchhccChhHHHHHHHhhccch
Q 028061          141 EGSLSHYSSSASFLPGSS----STDDIREINAEAYLKFKAMRDSHI  182 (214)
Q Consensus       141 ~~~~~s~~~~~~~~~~~s----s~~~~~~~~~~~y~~~d~~~d~~~  182 (214)
                      .++.|.|++|||.++...    .|.+++.++|+.|..||.+++.+.
T Consensus         7 vtvlF~Di~gfT~l~~~~~~~~~~~~~~~~Ln~~~~~fd~~~~~~~   52 (199)
T d1azsb_           7 VCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPK   52 (199)
T ss_dssp             EEEEEEECTTHHHHCCCCTTTTTTHHHHHHHHHHHHHHHGGGGSGG
T ss_pred             EEEEEEEcCCChHHHHhCCcccCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            456899999999887654    356899999999999999999853