Query 028063
Match_columns 214
No_of_seqs 151 out of 185
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 08:49:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028063.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028063hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bho_A Cleavage and polyadenyl 100.0 1.2E-93 4.2E-98 614.4 18.4 200 12-212 9-208 (208)
2 3i7u_A AP4A hydrolase; nudix p 99.3 5.8E-12 2E-16 97.9 8.4 50 77-133 16-65 (134)
3 1vcd_A NDX1; nudix protein, di 99.2 2.2E-10 7.5E-15 85.4 10.4 104 60-188 1-106 (126)
4 2pbt_A AP4A hydrolase; nudix p 99.1 1.6E-10 5.4E-15 86.8 8.5 96 77-188 16-111 (134)
5 3eds_A MUTT/nudix family prote 99.1 2.5E-10 8.6E-15 89.2 10.0 129 46-188 5-134 (153)
6 3f13_A Putative nudix hydrolas 99.1 4.9E-10 1.7E-14 90.1 9.8 63 62-134 16-78 (163)
7 3id9_A MUTT/nudix family prote 99.1 4.5E-10 1.5E-14 88.6 9.4 77 49-136 11-89 (171)
8 2fvv_A Diphosphoinositol polyp 99.1 2E-10 6.9E-15 94.9 7.5 73 54-134 33-107 (194)
9 3f6a_A Hydrolase, nudix family 99.0 1E-09 3.4E-14 85.9 10.0 63 61-133 5-68 (159)
10 3gwy_A Putative CTP pyrophosph 99.0 4.7E-10 1.6E-14 85.8 7.7 101 63-187 7-114 (140)
11 3i9x_A MUTT/nudix family prote 99.0 3.2E-10 1.1E-14 91.7 7.0 69 62-137 28-111 (187)
12 3oga_A Nucleoside triphosphata 99.0 5E-10 1.7E-14 87.9 7.7 59 55-115 20-84 (165)
13 3u53_A BIS(5'-nucleosyl)-tetra 99.0 3.8E-10 1.3E-14 88.3 6.7 51 65-115 6-65 (155)
14 3son_A Hypothetical nudix hydr 99.0 4E-10 1.4E-14 86.9 6.7 57 59-115 1-60 (149)
15 1ktg_A Diadenosine tetraphosph 99.0 5.1E-10 1.7E-14 84.6 6.9 68 61-132 3-73 (138)
16 2azw_A MUTT/nudix family prote 99.0 4.3E-10 1.5E-14 85.8 6.4 111 61-188 18-129 (148)
17 2fb1_A Conserved hypothetical 99.0 6.7E-10 2.3E-14 93.9 8.2 72 59-137 11-86 (226)
18 3gg6_A Nudix motif 18, nucleos 99.0 7E-10 2.4E-14 86.1 7.5 104 59-188 18-129 (156)
19 2yyh_A MUTT domain, 8-OXO-DGTP 99.0 1.5E-09 5.2E-14 82.7 9.2 69 60-136 8-80 (139)
20 3q1p_A Phosphohydrolase (MUTT/ 99.0 1.8E-09 6.1E-14 89.3 9.7 64 61-135 68-132 (205)
21 3grn_A MUTT related protein; s 99.0 1.2E-09 4.1E-14 84.7 7.8 65 60-134 7-77 (153)
22 3gz5_A MUTT/nudix family prote 99.0 9.3E-10 3.2E-14 94.0 7.8 73 60-139 21-99 (240)
23 3shd_A Phosphatase NUDJ; nudix 99.0 1.2E-09 4.2E-14 84.3 7.0 93 76-187 16-113 (153)
24 2b0v_A Nudix hydrolase; struct 98.9 2.3E-09 7.8E-14 82.4 7.8 51 76-133 19-73 (153)
25 1sjy_A MUTT/nudix family prote 98.9 2.5E-09 8.4E-14 82.7 8.1 106 61-188 13-129 (159)
26 3h95_A Nucleoside diphosphate- 98.9 2.3E-09 8E-14 87.7 8.2 63 61-132 26-91 (199)
27 1k2e_A Nudix homolog; nudix/MU 98.9 1.6E-09 5.3E-14 84.9 6.8 61 62-133 2-63 (156)
28 2pqv_A MUTT/nudix family prote 98.9 1.7E-09 5.8E-14 83.7 6.9 63 59-133 17-79 (154)
29 3cng_A Nudix hydrolase; struct 98.9 5.6E-09 1.9E-13 84.8 10.2 62 61-133 40-105 (189)
30 1nqz_A COA pyrophosphatase (MU 98.9 1.3E-09 4.4E-14 88.2 6.1 111 58-189 31-151 (194)
31 2o1c_A DATP pyrophosphohydrola 98.9 2.8E-09 9.6E-14 81.0 7.6 116 61-188 9-131 (150)
32 4dyw_A MUTT/nudix family prote 98.9 3.7E-09 1.3E-13 83.0 8.6 64 60-134 28-95 (157)
33 1mut_A MUTT, nucleoside tripho 98.9 7.4E-10 2.5E-14 82.4 4.2 51 62-115 5-60 (129)
34 2w4e_A MUTT/nudix family prote 98.9 1.3E-09 4.5E-14 84.5 5.4 106 62-189 5-117 (145)
35 3ees_A Probable pyrophosphohyd 98.9 5.2E-09 1.8E-13 79.9 8.5 62 61-132 21-87 (153)
36 3q93_A 7,8-dihydro-8-oxoguanin 98.9 3E-09 1E-13 85.6 7.3 63 61-133 24-90 (176)
37 2rrk_A ORF135, CTP pyrophospho 98.9 4.6E-09 1.6E-13 79.3 7.9 50 77-133 21-75 (140)
38 2fkb_A Putative nudix hydrolas 98.9 1.2E-08 4.3E-13 80.9 10.4 56 58-115 33-95 (180)
39 3o8s_A Nudix hydrolase, ADP-ri 98.9 3.2E-09 1.1E-13 87.8 7.1 64 61-135 70-133 (206)
40 1rya_A GDP-mannose mannosyl hy 98.9 5.1E-09 1.7E-13 80.9 7.5 54 59-115 16-73 (160)
41 3hhj_A Mutator MUTT protein; n 98.9 2.4E-09 8.1E-14 83.4 5.6 40 76-115 41-85 (158)
42 3r03_A Nudix hydrolase; struct 98.8 2.3E-09 7.8E-14 81.5 5.0 40 76-115 20-64 (144)
43 2fml_A MUTT/nudix family prote 98.8 9.6E-09 3.3E-13 89.2 9.2 76 59-139 37-118 (273)
44 3fk9_A Mutator MUTT protein; s 98.8 5.8E-09 2E-13 85.1 7.2 52 60-115 3-55 (188)
45 1vhz_A ADP compounds hydrolase 98.8 2.2E-08 7.4E-13 82.6 10.3 106 61-189 48-160 (198)
46 1f3y_A Diadenosine 5',5'''-P1, 98.8 4.9E-09 1.7E-13 81.0 5.9 54 59-115 12-67 (165)
47 2kdv_A RNA pyrophosphohydrolas 98.8 6.1E-09 2.1E-13 83.0 6.5 54 59-115 6-60 (164)
48 2yvp_A NDX2, MUTT/nudix family 98.8 3.3E-09 1.1E-13 84.8 4.7 105 61-188 41-153 (182)
49 3fcm_A Hydrolase, nudix family 98.8 1.1E-08 3.9E-13 83.3 7.6 52 64-116 47-99 (197)
50 3exq_A Nudix family hydrolase; 98.8 1.6E-08 5.4E-13 79.7 7.7 65 62-134 10-78 (161)
51 2b06_A MUTT/nudix family prote 98.8 1.3E-08 4.3E-13 78.7 6.9 66 61-133 8-76 (155)
52 1q27_A Putative nudix hydrolas 98.8 2.3E-08 7.7E-13 78.8 8.3 105 61-188 34-147 (171)
53 1hzt_A Isopentenyl diphosphate 98.8 7.2E-09 2.4E-13 83.7 5.4 58 57-116 27-91 (190)
54 2jvb_A Protein PSU1, mRNA-deca 98.7 1.5E-08 5.1E-13 77.5 5.4 52 64-116 6-58 (146)
55 1mk1_A ADPR pyrophosphatase; n 98.7 2.7E-08 9.1E-13 82.2 6.6 63 63-134 44-112 (207)
56 2a6t_A SPAC19A8.12; alpha/beta 98.7 2.6E-08 8.8E-13 86.9 6.7 62 54-116 93-156 (271)
57 1x51_A A/G-specific adenine DN 98.7 1.8E-08 6.2E-13 78.4 4.8 56 60-115 18-80 (155)
58 1g0s_A Hypothetical 23.7 kDa p 98.6 1.7E-07 6E-12 77.8 9.5 106 63-189 58-179 (209)
59 1v8y_A ADP-ribose pyrophosphat 98.6 5.8E-08 2E-12 76.9 6.2 101 64-188 36-143 (170)
60 2dsc_A ADP-sugar pyrophosphata 98.6 1.3E-07 4.5E-12 78.3 8.1 108 63-190 63-184 (212)
61 3fjy_A Probable MUTT1 protein; 98.6 1.1E-07 3.7E-12 84.9 7.7 53 73-132 35-88 (364)
62 2qjt_B Nicotinamide-nucleotide 98.6 1.7E-07 5.8E-12 82.1 8.5 50 62-115 209-262 (352)
63 3e57_A Uncharacterized protein 98.6 3.3E-08 1.1E-12 84.4 3.9 64 60-133 66-144 (211)
64 2qjo_A Bifunctional NMN adenyl 98.5 1.2E-07 3.9E-12 82.5 7.2 51 61-115 203-257 (341)
65 1vk6_A NADH pyrophosphatase; 1 98.5 7.9E-08 2.7E-12 84.1 6.2 62 63-133 140-204 (269)
66 1u20_A U8 snoRNA-binding prote 98.5 2.7E-07 9.4E-12 76.9 8.4 121 53-189 25-165 (212)
67 3o6z_A GDP-mannose pyrophospha 98.4 2.3E-07 7.9E-12 75.8 6.1 103 64-188 47-165 (191)
68 1q33_A Pyrophosphatase, ADP-ri 98.4 4.3E-07 1.5E-11 79.9 7.1 41 75-115 138-179 (292)
69 3kvh_A Protein syndesmos; NUDT 98.4 1.2E-07 4E-12 81.5 3.0 112 58-189 18-149 (214)
70 3fsp_A A/G-specific adenine gl 98.4 1.7E-07 5.9E-12 84.6 3.9 50 75-132 251-305 (369)
71 2xsq_A U8 snoRNA-decapping enz 98.2 1.1E-06 3.7E-11 74.3 4.8 96 77-190 66-174 (217)
72 3q91_A Uridine diphosphate glu 98.1 3.1E-06 1E-10 71.7 5.2 85 85-188 94-187 (218)
73 3qsj_A Nudix hydrolase; struct 98.1 2.1E-06 7.2E-11 73.8 3.8 57 60-116 7-90 (232)
74 2dho_A Isopentenyl-diphosphate 97.8 7.5E-05 2.5E-09 63.6 9.5 58 57-116 54-127 (235)
75 2pny_A Isopentenyl-diphosphate 97.8 4.4E-05 1.5E-09 65.6 6.8 58 57-116 65-138 (246)
76 3rh7_A Hypothetical oxidoreduc 97.5 0.00011 3.8E-09 65.8 5.8 64 59-137 181-245 (321)
77 3dup_A MUTT/nudix family prote 97.4 0.0003 1E-08 62.7 6.7 59 58-116 114-180 (300)
78 2qlc_A DNA repair protein RADC 61.8 1.1 3.8E-05 34.9 -1.0 49 59-128 63-114 (126)
No 1
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=100.00 E-value=1.2e-93 Score=614.35 Aligned_cols=200 Identities=45% Similarity=0.838 Sum_probs=189.9
Q ss_pred CCCCCCCceEEEeeCCceeeccccCCCCCChhHHHHHHHHHHhhcccCCeeEEEEEEEEecCCCCeEEEEeecCCceecC
Q 028063 12 NGSDRNGYVVDIYPLSSYYFGSKEAIPFKDETLYNRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLP 91 (214)
Q Consensus 12 ~~~~~~~~~~~~Ypl~nY~fg~k~~~~ekd~sv~~rl~Rl~~~y~~~GmRrsV~aVllvh~h~~phVLLLQ~~~~~fkLP 91 (214)
+.++...++|+||||+||+||+||+++|||+|+.+||+||+++|++.|||++|+|||+||+|++|||||+|+++++|+||
T Consensus 9 ~~~~~~~~~~~iYplsnY~f~~k~~~~ekd~s~~~r~~rl~~~y~~~g~R~sV~avil~~~~~~phVLLlq~~~~~f~LP 88 (208)
T 3bho_A 9 TKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLP 88 (208)
T ss_dssp CCCTTTCCEEEECBGGGEEEEEECCCCCSCSSHHHHHHHHHHHHHHHCSEEEEEEEEEEEETTEEEEEEEEEETTEEECS
T ss_pred CCCccccceEEEecccceeEccCCccccccccHHHHHHHHHHHHHhhCCceEEEEEEEEcCCCCcEEEEEEcCCCcEECC
Confidence 45666678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeecCCCCCCCCCCCCCCCCCcceeeEEEEEEcCCceEEe
Q 028063 92 GGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFF 171 (214)
Q Consensus 92 GGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwRpnFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~ 171 (214)
||++++||++++||+|||.|+||. ++++..+|+||||||+|||||||++||||+||||||||||+|||+|||||+|+|+
T Consensus 89 GGkle~gE~~~eaL~REL~EELg~-~~~~~~~~eIge~lg~wwRp~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~~~f~ 167 (208)
T 3bho_A 89 GGELNPGEDEVEGLKRLMTEILGR-QDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFA 167 (208)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHCC-CC-----CEEEEEEEEEEECSSSSCCBSSCCTTCCSCSEEEEEEEEECCSSEEEE
T ss_pred CcccCCCCCHHHHHHHHHHHHhCC-CcCCCccEEEhheEEEEecCCCCCcCCCCCCcccCchhhheeeeeEecCccceEe
Confidence 999999999999999999999998 4667789999999999999999999999999999999999999999999999999
Q ss_pred ecCCCeEEeccchhhhcCcccccceeecccceeeeeEEEEe
Q 028063 172 VPKNLKLLAVPLCQIHENHKTYGQIISGVPQLLSKFSFNII 212 (214)
Q Consensus 172 vpkn~kL~AvPLfely~N~~~yG~~is~iP~llSRf~f~~~ 212 (214)
|||||||+||||||||||+++|||+||||||+||||+|+|+
T Consensus 168 vPkn~kL~AvPLfely~N~~~yG~~issiP~llSRf~~~~~ 208 (208)
T 3bho_A 168 VPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN 208 (208)
T ss_dssp EETTCEEEEEEHHHHTTCHHHHHHHHTTHHHHHTTCEEEEC
T ss_pred cCCCCeEEeecHHhhhcchhhhchhhhhhhhhhhheeeEeC
Confidence 99999999999999999999999999999999999999985
No 2
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.30 E-value=5.8e-12 Score=97.89 Aligned_cols=50 Identities=20% Similarity=0.414 Sum_probs=46.5
Q ss_pred eEEEEeecCCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeee
Q 028063 77 HLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (214)
Q Consensus 77 hVLLLQ~~~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~W 133 (214)
+|||+|+.++.|.||||++++||++.+|++||+.||+|. +.++.++++..
T Consensus 16 ~vLL~~r~~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl-------~~~~~~~l~~~ 65 (134)
T 3i7u_A 16 EVLLIKTPSNVWSFPKGNIEPGEKPEETAVREVWEETGV-------KGEILDYIGEI 65 (134)
T ss_dssp EEEEEECTTSCEECCEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEEE
T ss_pred EEEEEEeCCCcEECCeeEecCCCCHHHHHHHHHHHhcCc-------eEEEeeeeeee
Confidence 899999999999999999999999999999999999998 67788888763
No 3
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.16 E-value=2.2e-10 Score=85.39 Aligned_cols=104 Identities=16% Similarity=0.016 Sum_probs=72.6
Q ss_pred CeeEEEEEEEEecCCCCeEEEEeecCCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeecCCCC
Q 028063 60 LRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFE 139 (214)
Q Consensus 60 mRrsV~aVllvh~h~~phVLLLQ~~~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwRpnFe 139 (214)
|..+|.+|++.++ -+|||.|+..+.|.||||++++||+..+++.||+.||+|. ...+.+.++.+..
T Consensus 1 m~~~~~~vi~~~~---~~vLl~~r~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl-------~~~~~~~~~~~~~---- 66 (126)
T 1vcd_A 1 MELGAGGVVFNAK---REVLLLRDRMGFWVFPKGHPEPGESLEEAAVREVWEETGV-------RAEVLLPLYPTRY---- 66 (126)
T ss_dssp CEEEEEEEEECTT---SCEEEEECTTSCEECCEECCCTTCCHHHHHHHHHHHHHCC-------EEEEEEEEEEEEE----
T ss_pred CeeEEEEEEEcCC---CEEEEEEECCCCccCCcCcCCCCCCHHHHHHHHHHHhhCc-------EeeeccEEeEEEE----
Confidence 5677888777322 2899999988999999999999999999999999999998 5666777776521
Q ss_pred CCCCCCCCCCCCCcceeeEEEEEEcCCceEEeec--CCCeEEeccchhhhc
Q 028063 140 TLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVP--KNLKLLAVPLCQIHE 188 (214)
Q Consensus 140 ~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~vp--kn~kL~AvPLfely~ 188 (214)
++ +|. .....+|.++..... ..+ ....+.-+|+=|+.+
T Consensus 67 ----~~--~~~---~~~~~~~~~~~~~~~--~~~~~e~~~~~w~~~~el~~ 106 (126)
T 1vcd_A 67 ----VN--PKG---VEREVHWFLMRGEGA--PRLEEGMTGAGWFSPEEARA 106 (126)
T ss_dssp ----EC--TTS---CEEEEEEEEEEEESC--CCCCTTCCEEEEECHHHHHH
T ss_pred ----ec--CCc---eEEEEEEEEEEcCCC--CCCCcceeeeEEcCHHHHHH
Confidence 11 232 234567777654332 111 224566677766654
No 4
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.14 E-value=1.6e-10 Score=86.81 Aligned_cols=96 Identities=16% Similarity=0.219 Sum_probs=64.4
Q ss_pred eEEEEeecCCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeecCCCCCCCCCCCCCCCCCccee
Q 028063 77 HLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKRPKEC 156 (214)
Q Consensus 77 hVLLLQ~~~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwRpnFe~~~yPYlP~Hit~pKE~ 156 (214)
+|||+|+.++.|.||||.+++||+..+|+.||+.||+|. +....+.++..-. .| +. +-..-...
T Consensus 16 ~vLl~~r~~~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl-------~~~~~~~~~~~~~-~~-----~~---~~~~~~~~ 79 (134)
T 2pbt_A 16 EVLLIKTPSNVWSFPKGNIEPGEKPEETAVREVWEETGV-------KGEILDYIGEIHY-WY-----TL---KGERIFKT 79 (134)
T ss_dssp EEEEEECTTSCEECCEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEEEEE-EE-----EE---TTEEEEEE
T ss_pred EEEEEEeCCCcEECCccccCCCCCHHHHHHHHHHHHHCC-------ccEEeeeeeEEEE-Ee-----eC---CCcEEEEE
Confidence 999999988999999999999999999999999999998 5666677776311 01 00 01122345
Q ss_pred eEEEEEEcCCceEEeecCCCeEEeccchhhhc
Q 028063 157 TKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHE 188 (214)
Q Consensus 157 ~kl~~V~Lpe~~~f~vpkn~kL~AvPLfely~ 188 (214)
..+|++++.....-.-.....+.-+|+=|+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 111 (134)
T 2pbt_A 80 VKYYLMKYKEGEPRPSWEVKDAKFFPIKEAKK 111 (134)
T ss_dssp EEEEEEEEEEECCCCCTTSSEEEEEEHHHHHH
T ss_pred EEEEEEEecCCCcCCCcceeEEEEEcHHHHHh
Confidence 56777776543211111224556667766654
No 5
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.13 E-value=2.5e-10 Score=89.18 Aligned_cols=129 Identities=14% Similarity=0.171 Sum_probs=77.8
Q ss_pred HHHHHHHHhhcccCCeeEEEEEEEEecCCCCeEEEEeecCCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceE
Q 028063 46 NRVLRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWE 125 (214)
Q Consensus 46 ~rl~Rl~~~y~~~GmRrsV~aVllvh~h~~phVLLLQ~~~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~e 125 (214)
+.+..++.........+.+.+++++.+ ..+|||.|+..+.|.||||++++||+..+|++|||.||+|. +..
T Consensus 5 ~~~~~~r~~~~~~~~~~~~v~~ii~~~--~~~vLL~~r~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~ 75 (153)
T 3eds_A 5 LYYKKIREQLGHELIFXPSVAAVIKNE--QGEILFQYPGGEYWSLPAGAIELGETPEEAVVREVWEETGL-------KVQ 75 (153)
T ss_dssp HHHHHHHHHHTTSCEEEEEEEEEEBCT--TCCEEEECC---CBBCSEEECCTTSCHHHHHHHHHHHHHCE-------EEE
T ss_pred hHHHHHHHhcCCCcEEeeeEEEEEEcC--CCeEEEEEcCCCcEECCccccCCCCCHHHHHHHHHHHHHCc-------cce
Confidence 344556666666666555555555433 35799988888899999999999999999999999999998 667
Q ss_pred EceeeeeeecCCCCCCCCCCCCCCCCCcceeeEEEEEEcCCceEEeec-CCCeEEeccchhhhc
Q 028063 126 VGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVP-KNLKLLAVPLCQIHE 188 (214)
Q Consensus 126 Vge~Lg~WwRpnFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~vp-kn~kL~AvPLfely~ 188 (214)
+.+.++.+-.+.+ .+.| ++-........+|.+.+.......-+ ....+.-+|+=||-+
T Consensus 76 ~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 134 (153)
T 3eds_A 76 VKKQKGVFGGKEY---RYTY--SNGDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPP 134 (153)
T ss_dssp EEEEEEEECSGGG---EEEC--TTSCEEEEEEEEEEEEEEEECCC-------CEEEECGGGCCC
T ss_pred eeeEEEEecccce---eeec--CCCCeEEEEEEEEEEEecCCccccCCCcEEEEEEECHHHCch
Confidence 7778887633322 1111 12111233456777776543211111 112455556655543
No 6
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.08 E-value=4.9e-10 Score=90.11 Aligned_cols=63 Identities=19% Similarity=0.184 Sum_probs=47.0
Q ss_pred eEEEEEEEEecCCCCeEEEEeecCCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeee
Q 028063 62 TCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWW 134 (214)
Q Consensus 62 rsV~aVllvh~h~~phVLLLQ~~~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~Ww 134 (214)
..|.++++.++. +|||+|+..+.|.||||++++||+..++++||+.||+|. +....+.++.+.
T Consensus 16 ~~~~~~ii~~~~---~vLL~~r~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~l~~~~ 78 (163)
T 3f13_A 16 ARRATAIIEMPD---GVLVTASRGGRYNLPGGKANRGELRSQALIREIREETGL-------RINSMLYLFDHI 78 (163)
T ss_dssp EEEEEEECEETT---EEEEEECC---BBCSEEECCTTCCHHHHHHHHHHHHHCC-------CCCEEEEEEEEE
T ss_pred eEEEEEEEEeCC---EEEEEEECCCeEECCceeCCCCCCHHHHHHHHHHHHHCc-------ccceeEEEEEEe
Confidence 344444443333 799999989999999999999999999999999999998 445556676654
No 7
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.08 E-value=4.5e-10 Score=88.64 Aligned_cols=77 Identities=26% Similarity=0.393 Sum_probs=55.3
Q ss_pred HHHHHhhcccCCeeEEEEEEEEecCCCCeEEEEeec--CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEE
Q 028063 49 LRMKSNYDAHGLRTCVEAVLLVELFKHPHLLLLQVR--NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEV 126 (214)
Q Consensus 49 ~Rl~~~y~~~GmRrsV~aVllvh~h~~phVLLLQ~~--~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eV 126 (214)
.+....+....++..|.+|++ ++ .+|||+|+. .+.|.||||++++||+..++++||+.||+|. +.++
T Consensus 11 ~~~~~~~~~~~~~~~v~~ii~-~~---~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl-------~~~~ 79 (171)
T 3id9_A 11 NRKRRLYIENIMQVRVTGILI-ED---EKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGL-------EVKI 79 (171)
T ss_dssp -----------CEEEEEEEEE-ET---TEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCC-------CEEE
T ss_pred ChhhhhccCCceEEEEEEEEE-EC---CEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCC-------cccc
Confidence 334444555566777777665 33 489999986 5899999999999999999999999999998 5677
Q ss_pred ceeeeeeecC
Q 028063 127 GECLGMWWKP 136 (214)
Q Consensus 127 ge~Lg~WwRp 136 (214)
.+.++.+..+
T Consensus 80 ~~~~~~~~~~ 89 (171)
T 3id9_A 80 KKLLYVCDKP 89 (171)
T ss_dssp EEEEEEEEET
T ss_pred ceEEEEEccc
Confidence 8888876544
No 8
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.08 E-value=2e-10 Score=94.89 Aligned_cols=73 Identities=18% Similarity=0.361 Sum_probs=60.7
Q ss_pred hhcccCCeeEEEEEEEEecCCCCeEEEEeec--CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeee
Q 028063 54 NYDAHGLRTCVEAVLLVELFKHPHLLLLQVR--NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLG 131 (214)
Q Consensus 54 ~y~~~GmRrsV~aVllvh~h~~phVLLLQ~~--~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg 131 (214)
.|...+.+..|.+|++. ..+..+|||+|+. .+.|.||||++++||+.++|++||+.||+|. +..+.++++
T Consensus 33 ~~~~~~~~~~~~~vi~~-~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl-------~~~~~~~l~ 104 (194)
T 2fvv_A 33 TYDGDGYKKRAACLCFR-SESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGV-------KGTLGRLVG 104 (194)
T ss_dssp CBCTTSCEEEEEEEEES-STTCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCE-------EEEEEEEEE
T ss_pred ccccCCccccEEEEEEE-ECCCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCC-------ccccceEEE
Confidence 46666888888777763 2334699999975 4799999999999999999999999999998 677788898
Q ss_pred eee
Q 028063 132 MWW 134 (214)
Q Consensus 132 ~Ww 134 (214)
.+.
T Consensus 105 ~~~ 107 (194)
T 2fvv_A 105 IFE 107 (194)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 9
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.05 E-value=1e-09 Score=85.86 Aligned_cols=63 Identities=16% Similarity=0.125 Sum_probs=50.3
Q ss_pred eeEEEEEEEEecCCCCeEEEEeec-CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeee
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~-~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~W 133 (214)
|+.+.++++.++ -+|||+|+. .+.|.||||++++||+..+|++|||.||+|. +..+.+.++.+
T Consensus 5 ~~~~v~~vi~~~---~~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~~~~~ 68 (159)
T 3f6a_A 5 RHFTVSVFIVCK---DKVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGL-------NVTLYNPIDIN 68 (159)
T ss_dssp SCEEEEEEEEET---TEEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCC-------CCEECCCCCHH
T ss_pred ceEEEEEEEEEC---CEEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCC-------Cceeccccccc
Confidence 344445555543 399999986 4899999999999999999999999999998 56677777643
No 10
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.04 E-value=4.7e-10 Score=85.82 Aligned_cols=101 Identities=20% Similarity=0.262 Sum_probs=66.4
Q ss_pred EEEEEEEEecCCCCeEEEEeecC-------CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeec
Q 028063 63 CVEAVLLVELFKHPHLLLLQVRN-------SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWK 135 (214)
Q Consensus 63 sV~aVllvh~h~~phVLLLQ~~~-------~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwR 135 (214)
.+.++++.++ .+|||+|+.. +.|.||||++++||+..+|+.||+.||+|. +.+..+.++.+..
T Consensus 7 ~~v~~vi~~~---~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl-------~~~~~~~~~~~~~ 76 (140)
T 3gwy_A 7 EVVAAVIRLG---EKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDY-------VIEVGEKLLTVHH 76 (140)
T ss_dssp EEEEEEEEET---TEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCC-------CEEEEEEEEEEEC
T ss_pred EEEEEEEEeC---CEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCc-------EEEeceEEEEEEE
Confidence 3344444443 4899999853 579999999999999999999999999998 6777778887421
Q ss_pred CCCCCCCCCCCCCCCCCcceeeEEEEEEcCCceEEeecCCCeEEeccchhhh
Q 028063 136 PDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIH 187 (214)
Q Consensus 136 pnFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~vpkn~kL~AvPLfely 187 (214)
. ++ | -.....+|.+++.... +.......+.-+|+=||-
T Consensus 77 -~-----~~----~---~~~~~~~f~~~~~~~~-~~~~E~~~~~W~~~~el~ 114 (140)
T 3gwy_A 77 -T-----YP----D---FEITMHAFLCHPVGQR-YVLKEHIAAQWLSTREMA 114 (140)
T ss_dssp -C-----CS----S---CCEEEEEEEEEECCSC-CCCCSSCEEEEECHHHHT
T ss_pred -E-----eC----C---ceEEEEEEEEEecCCc-ccccccceeEeccHHHHh
Confidence 1 11 1 2345678888876542 111122344555655554
No 11
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.04 E-value=3.2e-10 Score=91.72 Aligned_cols=69 Identities=23% Similarity=0.251 Sum_probs=56.4
Q ss_pred eEEEEEEEEecCC----CCeEEEEee-----------cCCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEE
Q 028063 62 TCVEAVLLVELFK----HPHLLLLQV-----------RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEV 126 (214)
Q Consensus 62 rsV~aVllvh~h~----~phVLLLQ~-----------~~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eV 126 (214)
.+|.+|++....+ ..+|||+|+ ..+.|.||||.+++||+..+|++||+.||+|. +..+
T Consensus 28 ~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl-------~~~~ 100 (187)
T 3i9x_A 28 YTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSL-------TDIP 100 (187)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCC-------CSCC
T ss_pred ceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCC-------CCcc
Confidence 7888888875554 569999999 24799999999999999999999999999998 4455
Q ss_pred ceeeeeeecCC
Q 028063 127 GECLGMWWKPD 137 (214)
Q Consensus 127 ge~Lg~WwRpn 137 (214)
.+.++.+..+.
T Consensus 101 ~~~l~~~~~~~ 111 (187)
T 3i9x_A 101 LIPFGVFDKPG 111 (187)
T ss_dssp CEEEEEECCTT
T ss_pred eEEEEEEcCCc
Confidence 66777765443
No 12
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.03 E-value=5e-10 Score=87.90 Aligned_cols=59 Identities=22% Similarity=0.378 Sum_probs=45.1
Q ss_pred hcccCCeeEEEEEEEEecCCCCeEEEEeecC------CceecCCcccCCCCChHHHHHHHHHhhhCC
Q 028063 55 YDAHGLRTCVEAVLLVELFKHPHLLLLQVRN------SIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 55 y~~~GmRrsV~aVllvh~h~~phVLLLQ~~~------~~fkLPGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
+...+|++.+.+++++... .+|||+|+.. +.|.||||.+++||+..++++||+.||+|.
T Consensus 20 ~~~~~~~~~~~~~~ii~~~--~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl 84 (165)
T 3oga_A 20 FQSNAMRQRTIVCPLIQND--GCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGE 84 (165)
T ss_dssp ----CCEEEEEEEEEEEET--TEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCS
T ss_pred ccCCCcceEEEEEEEEeCC--CEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCC
Confidence 3445775555555555433 4899999863 689999999999999999999999999998
No 13
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.03 E-value=3.8e-10 Score=88.35 Aligned_cols=51 Identities=22% Similarity=0.372 Sum_probs=44.3
Q ss_pred EEEEEEe-------cCCCCeEEEEeecC--CceecCCcccCCCCChHHHHHHHHHhhhCC
Q 028063 65 EAVLLVE-------LFKHPHLLLLQVRN--SIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 65 ~aVllvh-------~h~~phVLLLQ~~~--~~fkLPGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
.|+|+.. +++...|||+|+.. +.|.||||++++||++.+|++||+.||+|.
T Consensus 6 ~G~iifr~~~~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl 65 (155)
T 3u53_A 6 CGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGI 65 (155)
T ss_dssp EEEEEEEECCCSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCC
T ss_pred eEEEEEccccccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCC
Confidence 4666554 46778999999864 689999999999999999999999999998
No 14
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.02 E-value=4e-10 Score=86.85 Aligned_cols=57 Identities=18% Similarity=0.226 Sum_probs=45.2
Q ss_pred CCee--EEEEEEEEecCCCCeEEEEeecC-CceecCCcccCCCCChHHHHHHHHHhhhCC
Q 028063 59 GLRT--CVEAVLLVELFKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 59 GmRr--sV~aVllvh~h~~phVLLLQ~~~-~~fkLPGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
||++ +|.+|++....+..+|||+|+.. +.|.||||++++||+..+|++||+.||+|.
T Consensus 1 gm~~~~~v~vvi~~~~~~~~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl 60 (149)
T 3son_A 1 GMRQPFQVLVIPFIKTEANYQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNL 60 (149)
T ss_dssp ---CCCEEEEEEEEECSSSEEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTC
T ss_pred CCCCceEEEEEEEEecCCCeEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCC
Confidence 5644 45455544445567999999864 899999999999999999999999999998
No 15
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.02 E-value=5.1e-10 Score=84.63 Aligned_cols=68 Identities=19% Similarity=0.327 Sum_probs=50.8
Q ss_pred eeEEEEEEEEecCCCCeEEEEeecC--CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEc-eeeee
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVRN--SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVG-ECLGM 132 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~~--~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVg-e~Lg~ 132 (214)
+++|.+|++....+..+|||+|+.. +.|.||||++++||+..+|++||+.||+|.. ..++++. .+++.
T Consensus 3 ~~~~~~vi~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~----~~~~~~~~~~~~~ 73 (138)
T 1ktg_A 3 VKAAGLVIYRKLAGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANIT----KEQLTIHEDCHET 73 (138)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCC----GGGEEEEEEEEEE
T ss_pred eEEEEEEEEEecCCCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCC----ccceEEeccccce
Confidence 4555555554444457999999864 4999999999999999999999999999983 1245544 45443
No 16
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.01 E-value=4.3e-10 Score=85.77 Aligned_cols=111 Identities=15% Similarity=0.172 Sum_probs=72.9
Q ss_pred eeEEEEEEEEecCCCCeEEEEeecCCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeecCCCCC
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFET 140 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwRpnFe~ 140 (214)
|.+|.+||+.. ...+|||+|+.++.|.||||.+++||+..+++.||+.||+|. +..+.+.++.+- .
T Consensus 18 ~~~~~~vi~~~--~~~~vLl~~r~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl-------~~~~~~~~~~~~-----~ 83 (148)
T 2azw_A 18 RYAAYIIVSKP--ENNTMVLVQAPNGAYFLPGGEIEGTETKEEAIHREVLEELGI-------SVEIGCYLGEAD-----E 83 (148)
T ss_dssp CCEEEEECEEG--GGTEEEEEECTTSCEECSEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEEEE-----E
T ss_pred eeEEEEEEECC--CCCeEEEEEcCCCCEeCCCcccCCCCCHHHHHHHHHHHHhCC-------eeEeeeEEEEEE-----E
Confidence 55666666532 235999999988999999999999999999999999999998 566677777631 0
Q ss_pred CCCCCCCCCC-CCcceeeEEEEEEcCCceEEeecCCCeEEeccchhhhc
Q 028063 141 LLFPYFPPNV-KRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHE 188 (214)
Q Consensus 141 ~~yPYlP~Hi-t~pKE~~kl~~V~Lpe~~~f~vpkn~kL~AvPLfely~ 188 (214)
+.| ++|. +.-.+...+|.++......-.-...-.+.-+|+=|+.+
T Consensus 84 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 129 (148)
T 2azw_A 84 YFY---SNHRQTAYYNPGYFYVANTWRQLSEPLERTNTLHWVAPEEAVR 129 (148)
T ss_dssp EEE---ETTTTEEEEEEEEEEEEEEEEECSSCC-CCSEEEEECHHHHHH
T ss_pred EEc---CCCCCcceEEEEEEEEEEcCcCCcCCCCceeeEEEeeHHHHHh
Confidence 111 1222 22345567787776432210011223566677766654
No 17
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.01 E-value=6.7e-10 Score=93.93 Aligned_cols=72 Identities=22% Similarity=0.148 Sum_probs=58.7
Q ss_pred CCeeEEEEEEEEecCCCCeEEEEeecC----CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeee
Q 028063 59 GLRTCVEAVLLVELFKHPHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWW 134 (214)
Q Consensus 59 GmRrsV~aVllvh~h~~phVLLLQ~~~----~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~Ww 134 (214)
..+.+|.+||+.-..+..+|||+|+.. +.|.||||.+++||+..+|++|||.||+|. +....+.++++.
T Consensus 11 ~p~v~v~~vi~~~~~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl-------~~~~~~~l~~~~ 83 (226)
T 2fb1_A 11 TFYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGL-------ENVYMEQVGAFG 83 (226)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCC-------CSCEEEEEEEEC
T ss_pred CCeEEEEEEEEEEeCCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCC-------CCCceEEEEEeC
Confidence 347788888886555678999999874 789999999999999999999999999998 344556777765
Q ss_pred cCC
Q 028063 135 KPD 137 (214)
Q Consensus 135 Rpn 137 (214)
.+.
T Consensus 84 ~~~ 86 (226)
T 2fb1_A 84 AID 86 (226)
T ss_dssp CTT
T ss_pred CCC
Confidence 443
No 18
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.01 E-value=7e-10 Score=86.12 Aligned_cols=104 Identities=22% Similarity=0.267 Sum_probs=71.5
Q ss_pred CCeeEEEEEEEEecCCCCeEEEEeecC----CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeee
Q 028063 59 GLRTCVEAVLLVELFKHPHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWW 134 (214)
Q Consensus 59 GmRrsV~aVllvh~h~~phVLLLQ~~~----~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~Ww 134 (214)
.+.+.|.+|++. ...+|||+|+.. +.|.||||++++||+..+|++||+.||+|. +..+.+.++.+.
T Consensus 18 ~~~~~v~~~i~~---~~~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl-------~~~~~~~~~~~~ 87 (156)
T 3gg6_A 18 NVCYVVLAVFLS---EQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGL-------HCEPETLLSVEE 87 (156)
T ss_dssp TCEEEEEEECBC---TTSEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCE-------EEEEEEEEEEEE
T ss_pred ceEEEEEEEEEe---CCCEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCc-------eeEeeeEEEEEc
Confidence 455566666552 235999999864 799999999999999999999999999998 677888888765
Q ss_pred cCCCCCCCCCCCCCCCCCcceeeEEEEEEcCCceEEee----cCCCeEEeccchhhhc
Q 028063 135 KPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFV----PKNLKLLAVPLCQIHE 188 (214)
Q Consensus 135 RpnFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~v----pkn~kL~AvPLfely~ 188 (214)
... ....-+|++.+.....-.. .....+.-+|+=||-+
T Consensus 88 ~~~----------------~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 129 (156)
T 3gg6_A 88 RGP----------------SWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPT 129 (156)
T ss_dssp SST----------------TEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCS
T ss_pred CCC----------------CEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcc
Confidence 211 1234577776643321111 1223556666666654
No 19
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.00 E-value=1.5e-09 Score=82.66 Aligned_cols=69 Identities=16% Similarity=0.265 Sum_probs=53.3
Q ss_pred CeeEEEEEEEEecCCCCe--EEEEeecC--CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeec
Q 028063 60 LRTCVEAVLLVELFKHPH--LLLLQVRN--SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWK 135 (214)
Q Consensus 60 mRrsV~aVllvh~h~~ph--VLLLQ~~~--~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwR 135 (214)
.+.+|.+|++..+.+ -+ |||+|+.. +.|.||||++++||+..+|++||+.||+|. +..+.+.++.+-.
T Consensus 8 p~~~v~~vi~~~~~~-~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl-------~~~~~~~~~~~~~ 79 (139)
T 2yyh_A 8 PLLATDVIIRLWDGE-NFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGL-------EVRLHKLMGVYSD 79 (139)
T ss_dssp CEEEEEEEEEEEETT-EEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCC-------CCEEEEEEEEECC
T ss_pred CeEEEEEEEEEEcCC-CcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCC-------CcccceEEEEECC
Confidence 466777777643222 24 99999863 459999999999999999999999999998 5667778887643
Q ss_pred C
Q 028063 136 P 136 (214)
Q Consensus 136 p 136 (214)
+
T Consensus 80 ~ 80 (139)
T 2yyh_A 80 P 80 (139)
T ss_dssp T
T ss_pred C
Confidence 3
No 20
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=98.99 E-value=1.8e-09 Score=89.31 Aligned_cols=64 Identities=17% Similarity=0.281 Sum_probs=52.2
Q ss_pred eeEEEEEEEEecCCCCeEEEEeec-CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeec
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWK 135 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~-~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwR 135 (214)
+.+|.|||+ ++ -+|||+|+. .+.|.||||++++||+..+|++||+.||+|. +..+.+.++.+..
T Consensus 68 ~~~v~~vv~-~~---~~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~v~~~~~l~~~~~ 132 (205)
T 3q1p_A 68 KVDIRAVVF-QN---EKLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGY-------EVDHFKLLAIFDK 132 (205)
T ss_dssp EEEEEEEEE-ET---TEEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEEEEH
T ss_pred cceEEEEEE-EC---CEEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCC-------ccccceEEEEEec
Confidence 455666665 32 399999986 6899999999999999999999999999998 6778888888654
No 21
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=98.98 E-value=1.2e-09 Score=84.75 Aligned_cols=65 Identities=25% Similarity=0.373 Sum_probs=50.2
Q ss_pred CeeEEEEEEEEecCCCCeEEEEeecC------CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeee
Q 028063 60 LRTCVEAVLLVELFKHPHLLLLQVRN------SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (214)
Q Consensus 60 mRrsV~aVllvh~h~~phVLLLQ~~~------~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~W 133 (214)
.+.+|.+||+ + ...+|||+|+.. +.|.||||.+++||+..+|++||+.||+|. +..+.+.++.+
T Consensus 7 ~~~~v~~vi~-~--~~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl-------~~~~~~~~~~~ 76 (153)
T 3grn_A 7 YIISVYALIR-N--EKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGI-------TMVPGDIAGQV 76 (153)
T ss_dssp EEEEEEEEEE-C--TTCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCC-------CCCCCSEEEEE
T ss_pred eEEEEEEEEE-c--CCCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCc-------EeecceEEEEE
Confidence 3556666655 2 234899999864 789999999999999999999999999998 34445566664
Q ss_pred e
Q 028063 134 W 134 (214)
Q Consensus 134 w 134 (214)
.
T Consensus 77 ~ 77 (153)
T 3grn_A 77 N 77 (153)
T ss_dssp E
T ss_pred E
Confidence 3
No 22
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=98.98 E-value=9.3e-10 Score=93.98 Aligned_cols=73 Identities=27% Similarity=0.208 Sum_probs=61.0
Q ss_pred CeeEEEEEEEEecCCCCeEEEEeecC----CceecCCcccCC--CCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeee
Q 028063 60 LRTCVEAVLLVELFKHPHLLLLQVRN----SIFKLPGGRLRP--GESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (214)
Q Consensus 60 mRrsV~aVllvh~h~~phVLLLQ~~~----~~fkLPGGrl~~--gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~W 133 (214)
...+|.+||+.-..+..+|||+|+.. +.|.||||.+++ ||+..+|++|||.||+|. +....+.+++|
T Consensus 21 p~v~v~~vi~~~~~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl-------~~~~~~~l~~~ 93 (240)
T 3gz5_A 21 QLLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAV-------VPPYIEQLCTV 93 (240)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSS-------CCSEEEEEEEE
T ss_pred CccEEEEEEEEEeCCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCC-------CCCceeeEEEe
Confidence 35788888887566678999999874 789999999999 999999999999999998 34556788888
Q ss_pred ecCCCC
Q 028063 134 WKPDFE 139 (214)
Q Consensus 134 wRpnFe 139 (214)
..+..+
T Consensus 94 ~~~~r~ 99 (240)
T 3gz5_A 94 GNNSRD 99 (240)
T ss_dssp EESSSS
T ss_pred CCCccC
Confidence 776554
No 23
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=98.95 E-value=1.2e-09 Score=84.26 Aligned_cols=93 Identities=15% Similarity=0.126 Sum_probs=62.9
Q ss_pred CeEEEEeec---CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeecCCCCCCCCCCCCCCCCC
Q 028063 76 PHLLLLQVR---NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDFETLLFPYFPPNVKR 152 (214)
Q Consensus 76 phVLLLQ~~---~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwRpnFe~~~yPYlP~Hit~ 152 (214)
.+|||+|+. .+.|.||||++++||+..++++||+.||+|. +..+.+.++..-- .+| ..
T Consensus 16 ~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~~~~~~~------~~~------~~ 76 (153)
T 3shd_A 16 GKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGI-------SAQPQHFIRMHQW------IAP------DK 76 (153)
T ss_dssp TEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCC-------CCCCCEEEEEEEE------CCT------TS
T ss_pred CEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCc-------ccccCcEEEEEEE------ecC------CC
Confidence 399999973 4679999999999999999999999999998 3444556665410 111 11
Q ss_pred cceeeEEEEEEcCCceEEee--cCCCeEEeccchhhh
Q 028063 153 PKECTKLFLVKLPVSQKFFV--PKNLKLLAVPLCQIH 187 (214)
Q Consensus 153 pKE~~kl~~V~Lpe~~~f~v--pkn~kL~AvPLfely 187 (214)
-.....+|.+.+........ .....+.-+|+=||.
T Consensus 77 ~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~ 113 (153)
T 3shd_A 77 TPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEIL 113 (153)
T ss_dssp CCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHHH
T ss_pred ceEEEEEEEEEccccCcCCCCcccceeeEEecHHHhh
Confidence 22345678887776542222 123456667777773
No 24
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=98.94 E-value=2.3e-09 Score=82.36 Aligned_cols=51 Identities=24% Similarity=0.349 Sum_probs=44.8
Q ss_pred CeEEEEeecC----CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeee
Q 028063 76 PHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (214)
Q Consensus 76 phVLLLQ~~~----~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~W 133 (214)
.+|||+|+.. +.|.||||++++||+..++++||+.||+|. +..+.+.++.+
T Consensus 19 ~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl-------~~~~~~~~~~~ 73 (153)
T 2b0v_A 19 DKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGH-------SFLPEVLTGIY 73 (153)
T ss_dssp TEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSE-------EEEEEEEEEEE
T ss_pred CEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCc-------EeccceEEEEE
Confidence 3899999863 379999999999999999999999999998 66777888875
No 25
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=98.94 E-value=2.5e-09 Score=82.65 Aligned_cols=106 Identities=17% Similarity=0.206 Sum_probs=70.1
Q ss_pred eeEEEEEEEEecCCCCeEEEEeecC--------CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeee
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVRN--------SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~~--------~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~ 132 (214)
+++|.+|| ++. ..+|||+|+.. +.|.||||++++||+..+++.||+.||+|. +....+.++.
T Consensus 13 ~~~~~~vi-~~~--~~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl-------~~~~~~~l~~ 82 (159)
T 1sjy_A 13 LRAAGVVL-LNE--RGDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGL-------RVRPVKFLGA 82 (159)
T ss_dssp EEEEEEEE-BCT--TCCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSC-------CEEEEEEEEE
T ss_pred EEeEEEEE-EeC--CCCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCc-------cceeeEEEEE
Confidence 44454444 332 34799999873 789999999999999999999999999998 5666778887
Q ss_pred eecCCCCCCCCCCCCCCCCCcceeeEEEEEEcCCceEEee-cC--CCeEEeccchhhhc
Q 028063 133 WWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFV-PK--NLKLLAVPLCQIHE 188 (214)
Q Consensus 133 WwRpnFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~v-pk--n~kL~AvPLfely~ 188 (214)
+... |+ |- -.....+|.++++....+.. .. ...+.-+|+=|+-+
T Consensus 83 ~~~~------~~----~~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 129 (159)
T 1sjy_A 83 YLGR------FP----DG--VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQ 129 (159)
T ss_dssp EEEE------CT----TS--CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHH
T ss_pred Eecc------cC----CC--ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHH
Confidence 6432 11 10 23456788887765432222 11 12455566666554
No 26
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=98.93 E-value=2.3e-09 Score=87.72 Aligned_cols=63 Identities=22% Similarity=0.317 Sum_probs=51.3
Q ss_pred eeEEEEEEEEecCCCCeEEEEeecC---CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeee
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVRN---SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~~---~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~ 132 (214)
+.+|.++++. ....+|||+|+.. +.|.||||++++||+.++|++||+.||+|. +..+.+.++.
T Consensus 26 ~v~v~~~v~~--~~~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl-------~~~~~~l~~~ 91 (199)
T 3h95_A 26 QVGVAGAVFD--ESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGI-------KSEFRSVLSI 91 (199)
T ss_dssp CCEEEEEEEE--TTTTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCC-------CEEEEEEEEE
T ss_pred cceEEEEEEe--CCCCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCC-------ccccceEEEE
Confidence 4566666663 2235999999875 899999999999999999999999999998 5666777764
No 27
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=98.93 E-value=1.6e-09 Score=84.89 Aligned_cols=61 Identities=21% Similarity=0.304 Sum_probs=49.3
Q ss_pred eEEEEEEEEecCCCCeEEEEeec-CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeee
Q 028063 62 TCVEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (214)
Q Consensus 62 rsV~aVllvh~h~~phVLLLQ~~-~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~W 133 (214)
.+|.|||+ + ..+|||+|+. .+.|.||||++++||+..++++||+.||+|. +.++.+.++..
T Consensus 2 ~~~~~vi~-~---~~~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~~~~~ 63 (156)
T 1k2e_A 2 IVTSGVLV-E---NGKVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGI-------VVEPIGFTYGI 63 (156)
T ss_dssp EEEEEECE-E---TTEEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSE-------EEEECCCCCCC
T ss_pred eEEEEEEE-E---CCEEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCC-------cceeccceeee
Confidence 45566665 3 3489999986 4789999999999999999999999999998 56666666543
No 28
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=98.93 E-value=1.7e-09 Score=83.74 Aligned_cols=63 Identities=16% Similarity=0.202 Sum_probs=51.9
Q ss_pred CCeeEEEEEEEEecCCCCeEEEEeecCCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeee
Q 028063 59 GLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (214)
Q Consensus 59 GmRrsV~aVllvh~h~~phVLLLQ~~~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~W 133 (214)
.++.+|.+||+ ++ .+|||.|+ .+.|.||||++++||+..++++||+.||+|. +..+.+.++.+
T Consensus 17 ~~~~~~~~ii~-~~---~~vLl~~r-~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl-------~~~~~~~~~~~ 79 (154)
T 2pqv_A 17 VFGVRATALIV-QN---HKLLVTKD-KGKYYTIGGAIQVNESTEDAVVREVKEELGV-------KAQAGQLAFVV 79 (154)
T ss_dssp EEEEEEEECCE-ET---TEEEEEEE-TTEEECEEEECBTTCCHHHHHHHHHHHHHCC-------CEEEEEEEEEE
T ss_pred eEeEEEEEEEE-EC---CEEEEEec-CCeEECcccCcCCCCCHHHHHHHHHHHHhCC-------eeeeceEEEEE
Confidence 44667777765 32 48999999 8899999999999999999999999999998 56666676653
No 29
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=98.92 E-value=5.6e-09 Score=84.79 Aligned_cols=62 Identities=18% Similarity=0.248 Sum_probs=48.9
Q ss_pred eeEEEEEEEEecCCCCeEEEEeec----CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeee
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVR----NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~----~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~W 133 (214)
+.+|.+|+ .++ -+|||+|+. .+.|.||||++++||+.+++++|||.||+|. +..+.+.++.+
T Consensus 40 ~~~v~~ii-~~~---~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~~~~~ 105 (189)
T 3cng_A 40 KVIVGCIP-EWE---NKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANA-------RVEIRELYAVY 105 (189)
T ss_dssp EEEEEEEE-EET---TEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCC-------CEEEEEEEEEE
T ss_pred ceEEEEEE-EeC---CEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCC-------ccccceeEEEE
Confidence 33444444 343 389999986 4789999999999999999999999999998 56666666654
No 30
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=98.92 E-value=1.3e-09 Score=88.25 Aligned_cols=111 Identities=17% Similarity=0.170 Sum_probs=73.8
Q ss_pred cCCeeEEEEEEEEecCCCCeEEEEeec------CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeee
Q 028063 58 HGLRTCVEAVLLVELFKHPHLLLLQVR------NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLG 131 (214)
Q Consensus 58 ~GmRrsV~aVllvh~h~~phVLLLQ~~------~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg 131 (214)
.+.|.+|.+|++ ...+.++|||+|+. .+.|.||||++++||+.+++++||+.||+|.. ....+.++
T Consensus 31 ~~~~~~~~~v~i-~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~-------~~~~~~l~ 102 (194)
T 1nqz_A 31 PHYRRAAVLVAL-TREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALD-------PAAVTLLG 102 (194)
T ss_dssp --CEEEEEEEEE-ESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCC-------GGGCEEEE
T ss_pred CCCceEEEEEEE-ecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCC-------ccceEEEE
Confidence 467777777777 55556799999985 37899999999999999999999999999982 33344566
Q ss_pred eeecCCCCCCCCCCCCCCCCCcceeeEEEEEEcCCceE-EeecCC--CeEEeccchhh-hcC
Q 028063 132 MWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQK-FFVPKN--LKLLAVPLCQI-HEN 189 (214)
Q Consensus 132 ~WwRpnFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~-f~vpkn--~kL~AvPLfel-y~N 189 (214)
.+... + . ...+...+|++.+..... .....+ ..+.-+|+=|| -++
T Consensus 103 ~~~~~-~---------~---~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 151 (194)
T 1nqz_A 103 ELDDV-F---------T---PVGFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVP 151 (194)
T ss_dssp ECCCE-E---------E---TTTEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSC
T ss_pred EccCc-c---------C---CCCeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccCC
Confidence 53210 0 0 113456778777763322 222222 25666788887 553
No 31
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=98.92 E-value=2.8e-09 Score=80.97 Aligned_cols=116 Identities=15% Similarity=0.246 Sum_probs=69.9
Q ss_pred eeEEEEEEEEecCCCCeEEEEeec--CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEc--eeeeeeecC
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVR--NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVG--ECLGMWWKP 136 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~--~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVg--e~Lg~WwRp 136 (214)
+.+|.++++.. +..+|||+|+. .+.|.||||++++||+..++++||+.||+|.. ..+. .+++..-.+
T Consensus 9 ~~~v~~~i~~~--~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~-------~~~~~~~~~~~~~~~ 79 (150)
T 2o1c_A 9 PVSILVVIYAQ--DTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTID-------VVAEQLTLIDCQRTV 79 (150)
T ss_dssp SEEEEEEEEET--TTCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCC-------HHHHTCCEEEEEEEE
T ss_pred ceEEEEEEEeC--CCCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCC-------ccccceeEEeeecee
Confidence 34666665532 22489999986 48999999999999999999999999999982 2221 133322111
Q ss_pred C---CCCCCCCCCCCCCCCcceeeEEEEEEcCCceEEeecCCCeEEeccchhhhc
Q 028063 137 D---FETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVPKNLKLLAVPLCQIHE 188 (214)
Q Consensus 137 n---Fe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~vpkn~kL~AvPLfely~ 188 (214)
. |....+.|-+.| -.....+|.+.+.............+.-+|+=|+-+
T Consensus 80 ~~~~~~~~~~~~~~~~---~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~ 131 (150)
T 2o1c_A 80 EFEIFSHLRHRYAPGV---TRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAA 131 (150)
T ss_dssp EEECCGGGGGGBCTTC---CEEEEEEEEEEESSCCCCCCSSSSCEEEEEHHHHHH
T ss_pred eeeeecccccccCCCC---cceEEEEEEEEcCCCCCcChhHhhccEeecHHHHHh
Confidence 1 111122222222 234567888887654332223345566666666654
No 32
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=98.92 E-value=3.7e-09 Score=82.97 Aligned_cols=64 Identities=20% Similarity=0.251 Sum_probs=51.3
Q ss_pred CeeEEEEEEEEecCCCCeEEEEeec----CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeee
Q 028063 60 LRTCVEAVLLVELFKHPHLLLLQVR----NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWW 134 (214)
Q Consensus 60 mRrsV~aVllvh~h~~phVLLLQ~~----~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~Ww 134 (214)
.|.+|.+|++ ++ .+|||+|+. .+.|.||||.+++||+..++++||+.||+|. +..+.+.++.+.
T Consensus 28 ~~~~v~~vi~-~~---~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~~~~~~ 95 (157)
T 4dyw_A 28 PRVGCGAAIV-RD---GRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGI-------ALERATLLCVVD 95 (157)
T ss_dssp CEEEEEEEEE-ET---TEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSC-------EEESCEEEEEEE
T ss_pred ceeEEEEEEE-EC---CEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCc-------ccccCcEEEEEE
Confidence 3555555555 33 489999986 4789999999999999999999999999998 566667777643
No 33
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=98.91 E-value=7.4e-10 Score=82.39 Aligned_cols=51 Identities=16% Similarity=0.368 Sum_probs=41.7
Q ss_pred eEEEEEEEEecCCCCeEEEEeecC-----CceecCCcccCCCCChHHHHHHHHHhhhCC
Q 028063 62 TCVEAVLLVELFKHPHLLLLQVRN-----SIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 62 rsV~aVllvh~h~~phVLLLQ~~~-----~~fkLPGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
+.+.+||+.++ .+|||.|+.. +.|.||||++++||+..+++.||+.||+|.
T Consensus 5 ~~~~~ii~~~~---~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~ 60 (129)
T 1mut_A 5 QIAVGIIRNEN---NEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGI 60 (129)
T ss_dssp ECCCEECEETT---TEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCC
T ss_pred EEEEEEEEecC---CEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCC
Confidence 33445554222 4899999863 789999999999999999999999999998
No 34
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=98.90 E-value=1.3e-09 Score=84.53 Aligned_cols=106 Identities=14% Similarity=0.078 Sum_probs=62.6
Q ss_pred eEEEEEEEEecCCCCeEEEEee-cC----CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeecC
Q 028063 62 TCVEAVLLVELFKHPHLLLLQV-RN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKP 136 (214)
Q Consensus 62 rsV~aVllvh~h~~phVLLLQ~-~~----~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwRp 136 (214)
..+.+|+++...+ +|||++. .. +.|.||||++++||+.+++++||+.||+|. +....+.++.+|.
T Consensus 5 ~~~v~vi~~~~~~--~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl-------~~~~~~~l~~~~~- 74 (145)
T 2w4e_A 5 PRAVFILPVTAQG--EAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGG-------AASEWVPLPGFYP- 74 (145)
T ss_dssp CEEEEEEEEETTS--EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCE-------ECSEEEECCCBBS-
T ss_pred CCEEEEEEEcCCC--EEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCC-------ccCeEEEEecCcC-
Confidence 3445555554433 6888754 22 379999999999999999999999999998 2223345655331
Q ss_pred CCCCCCCCCCCCCCCCcceeeEEEEEEcCCceEEeec--CCCeEEeccchhhhcC
Q 028063 137 DFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVP--KNLKLLAVPLCQIHEN 189 (214)
Q Consensus 137 nFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~vp--kn~kL~AvPLfely~N 189 (214)
-|. ...+...+|++........... ....+.-+|+=|+.+.
T Consensus 75 ---------~~~---~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 117 (145)
T 2w4e_A 75 ---------QPS---ISGVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYRM 117 (145)
T ss_dssp ---------CTT---TCCCEEEEEEEEEEEEC--------CEEEEEEEHHHHHHH
T ss_pred ---------CCC---ccCceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHHH
Confidence 111 1234566777662111111111 2235666777777653
No 35
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=98.90 E-value=5.2e-09 Score=79.94 Aligned_cols=62 Identities=29% Similarity=0.367 Sum_probs=49.2
Q ss_pred eeEEEEEEEEecCCCCeEEEEeecC-----CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeee
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVRN-----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~~-----~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~ 132 (214)
.+.|.++++.++ .+|||+|+.. +.|.||||.+++||+..+++.||+.||+|. +....+.++.
T Consensus 21 ~~~~~~~i~~~~---~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl-------~~~~~~~~~~ 87 (153)
T 3ees_A 21 WIPVVAGFLRKD---GKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGI-------EAEVGELKLA 87 (153)
T ss_dssp EEEEEEEEEEET---TEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSC-------EEECCCEEEE
T ss_pred eEEEEEEEEEEC---CEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCC-------ccccCceEEE
Confidence 345555555444 4999999864 789999999999999999999999999998 4555556665
No 36
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=98.89 E-value=3e-09 Score=85.63 Aligned_cols=63 Identities=21% Similarity=0.258 Sum_probs=48.5
Q ss_pred eeEEEEEEEEecCCCCeEEEEeecC----CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeee
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~~----~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~W 133 (214)
++.+.++++.++ .+|||+|+.. +.|.||||++++||+.++|++||+.||+|. +..+.+.++.+
T Consensus 24 ~~~~~~~vi~~~---~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~l~~~ 90 (176)
T 3q93_A 24 SRLYTLVLVLQP---QRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGL-------TVDALHKVGQI 90 (176)
T ss_dssp EEEEEEEEEECS---SEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSC-------EESCCEEEEEE
T ss_pred CcEEEEEEEEeC---CEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCC-------cceeeEEEEEE
Confidence 445545554333 3999998753 789999999999999999999999999998 34445566664
No 37
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=98.89 E-value=4.6e-09 Score=79.27 Aligned_cols=50 Identities=30% Similarity=0.547 Sum_probs=43.3
Q ss_pred eEEEEeecC-----CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeee
Q 028063 77 HLLLLQVRN-----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (214)
Q Consensus 77 hVLLLQ~~~-----~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~W 133 (214)
+|||.|+.. +.|.||||.+++||+..+++.||+.||+|. +..+.+.++..
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl-------~~~~~~~~~~~ 75 (140)
T 2rrk_A 21 KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGI-------EATVGEYVASH 75 (140)
T ss_dssp EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCE-------EEECCEEEEEE
T ss_pred EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCC-------eeecccEEEEE
Confidence 899999853 899999999999999999999999999998 45556677764
No 38
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=98.88 E-value=1.2e-08 Score=80.94 Aligned_cols=56 Identities=14% Similarity=0.291 Sum_probs=44.9
Q ss_pred cCCeeEEEEEEEEecCCCCeEEEEeecC------Cceec-CCcccCCCCChHHHHHHHHHhhhCC
Q 028063 58 HGLRTCVEAVLLVELFKHPHLLLLQVRN------SIFKL-PGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 58 ~GmRrsV~aVllvh~h~~phVLLLQ~~~------~~fkL-PGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
.++++.+.+|++.... -+|||.++.. |.|.| |||++++||+..++++||+.||+|.
T Consensus 33 ~~~~~~~~~v~i~~~~--~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl 95 (180)
T 2fkb_A 33 QCLRHRATYIVVHDGM--GKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGI 95 (180)
T ss_dssp HTCCEEEEEEEEECSS--SCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCC
T ss_pred cCceeeEEEEEEECCC--CEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCC
Confidence 4665556666665433 2688888752 56999 9999999999999999999999998
No 39
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=98.87 E-value=3.2e-09 Score=87.84 Aligned_cols=64 Identities=20% Similarity=0.323 Sum_probs=54.5
Q ss_pred eeEEEEEEEEecCCCCeEEEEeecCCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeec
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWK 135 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwR 135 (214)
+.+|.+||+ ++ -+|||+|+..+.|.||||++++||+..+|+.||+.||+|. +....+.++.+..
T Consensus 70 ~~~v~~vv~-~~---~~vLLvrr~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~l~~~~~ 133 (206)
T 3o8s_A 70 KLDTRAAIF-QE---DKILLVQENDGLWSLPGGWCDVDQSVKDNVVKEVKEEAGL-------DVEAQRVVAILDK 133 (206)
T ss_dssp EEEEEEEEE-ET---TEEEEEECTTSCEECSEEECCTTSCHHHHHHHHHHHHHCE-------EEEEEEEEEEEEH
T ss_pred CccEEEEEE-EC---CEEEEEEecCCeEECCeeccCCCCCHHHHHHHHHHHHHCC-------cceeeeEEEEEec
Confidence 556666665 33 4999999988999999999999999999999999999998 6777888888653
No 40
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=98.86 E-value=5.1e-09 Score=80.94 Aligned_cols=54 Identities=20% Similarity=0.276 Sum_probs=45.8
Q ss_pred CCeeEEEEEEEEecCCCCeEEEEeecC----CceecCCcccCCCCChHHHHHHHHHhhhCC
Q 028063 59 GLRTCVEAVLLVELFKHPHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 59 GmRrsV~aVllvh~h~~phVLLLQ~~~----~~fkLPGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
..+.+|.+|++- ...+|||+|+.. +.|.||||++++||+..++++||+.||+|.
T Consensus 16 ~~~~~v~~vi~~---~~~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl 73 (160)
T 1rya_A 16 TPLVSLDFIVEN---SRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGL 73 (160)
T ss_dssp SCEEEEEEEEEC---TTSCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSS
T ss_pred CcEEEEEEEEEc---CCCEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC
Confidence 456777777762 234899999864 789999999999999999999999999998
No 41
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=98.86 E-value=2.4e-09 Score=83.44 Aligned_cols=40 Identities=30% Similarity=0.587 Sum_probs=37.2
Q ss_pred CeEEEEeecC-----CceecCCcccCCCCChHHHHHHHHHhhhCC
Q 028063 76 PHLLLLQVRN-----SIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 76 phVLLLQ~~~-----~~fkLPGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
.+|||+|+.. +.|.||||++++||+..+++.||+.||+|.
T Consensus 41 ~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 85 (158)
T 3hhj_A 41 NRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGV 85 (158)
T ss_dssp SEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCc
Confidence 4899999873 589999999999999999999999999998
No 42
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=98.85 E-value=2.3e-09 Score=81.55 Aligned_cols=40 Identities=35% Similarity=0.660 Sum_probs=37.1
Q ss_pred CeEEEEeecC-----CceecCCcccCCCCChHHHHHHHHHhhhCC
Q 028063 76 PHLLLLQVRN-----SIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 76 phVLLLQ~~~-----~~fkLPGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
.+|||.|+.. +.|.||||++++||+..+++.||+.||+|.
T Consensus 20 ~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl 64 (144)
T 3r03_A 20 GRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGV 64 (144)
T ss_dssp SCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCc
Confidence 4799999863 789999999999999999999999999998
No 43
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=98.84 E-value=9.6e-09 Score=89.21 Aligned_cols=76 Identities=24% Similarity=0.289 Sum_probs=57.2
Q ss_pred CCeeEEEEEEEEecCC--CCeEEEEeecC----CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeee
Q 028063 59 GLRTCVEAVLLVELFK--HPHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (214)
Q Consensus 59 GmRrsV~aVllvh~h~--~phVLLLQ~~~----~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~ 132 (214)
..+.+|.+|++....+ ..+|||+|+.+ +.|.||||.+++||+..++++|||.||+|..-. ...+ +.+++
T Consensus 37 ~p~v~v~~vv~~~~~~~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~--~~~l---~~l~~ 111 (273)
T 2fml_A 37 KPSLTVDMVLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVIS--QENI---EQLHS 111 (273)
T ss_dssp CCEEEEEEEEEEEETTTTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCC--GGGE---EEEEE
T ss_pred CCceEEEEEEEEEcCCCCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCC--cCcE---EEEEE
Confidence 3467888888875544 67999999874 789999999999999999999999999996211 1112 34666
Q ss_pred eecCCCC
Q 028063 133 WWKPDFE 139 (214)
Q Consensus 133 WwRpnFe 139 (214)
|..++.+
T Consensus 112 ~~~~~r~ 118 (273)
T 2fml_A 112 FSRPDRD 118 (273)
T ss_dssp ECCTTSS
T ss_pred EcCCCCC
Confidence 6655543
No 44
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=98.83 E-value=5.8e-09 Score=85.12 Aligned_cols=52 Identities=25% Similarity=0.473 Sum_probs=43.4
Q ss_pred CeeEEEEEEEEecCCCCeEEEEeec-CCceecCCcccCCCCChHHHHHHHHHhhhCC
Q 028063 60 LRTCVEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 60 mRrsV~aVllvh~h~~phVLLLQ~~-~~~fkLPGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
|++.|.+||. ++ .+|||+|+. .+.|.||||++++||+..+|++||+.||+|.
T Consensus 3 ~~~v~~~vi~-~~---~~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl 55 (188)
T 3fk9_A 3 LQRVTNCIVV-DH---DQVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGI 55 (188)
T ss_dssp CCEEEEEEEE-ET---TEEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSC
T ss_pred ceEEEEEEEE-EC---CEEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCC
Confidence 4555555544 43 389999985 5899999999999999999999999999998
No 45
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=98.82 E-value=2.2e-08 Score=82.62 Aligned_cols=106 Identities=15% Similarity=0.139 Sum_probs=71.0
Q ss_pred eeEEEEEEEEecCCCCeEEEEeec-C----CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeec
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVR-N----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWK 135 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~-~----~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwR 135 (214)
+..+.+|+++++. +|||++.. . +.|.||||++++||++++|++|||.||+|. +....+.++.++.
T Consensus 48 ~~~av~vl~~~~~---~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl-------~~~~~~~l~~~~~ 117 (198)
T 1vhz_A 48 NREAVMIVPIVDD---HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGF-------GANDLTFLKKLSM 117 (198)
T ss_dssp CCCEEEEEEEETT---EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEEEEC
T ss_pred CCCEEEEEEEECC---EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCC-------CcCceEEEEEEeC
Confidence 3445566655443 99999763 2 479999999999999999999999999998 4555677887652
Q ss_pred CCCCCCCCCCCCCCCCCcceeeEEEEEEcCCceEEee--cCCCeEEeccchhhhcC
Q 028063 136 PDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFV--PKNLKLLAVPLCQIHEN 189 (214)
Q Consensus 136 pnFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~v--pkn~kL~AvPLfely~N 189 (214)
. |.+ ..+...+|++.......... .....+.-+|+=|+.+-
T Consensus 118 ~----------~~~---~~~~~~~f~a~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 160 (198)
T 1vhz_A 118 A----------PSY---FSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDL 160 (198)
T ss_dssp C----------TTT---CCCEEEEEEEEEEEECCCCCCCSSCCCEEEEEGGGGGGG
T ss_pred C----------CCc---cCcEEEEEEEEeCCcccCCCCCCceEEEEEEEHHHHHHH
Confidence 1 111 23556788876433221111 12345677788887764
No 46
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=98.81 E-value=4.9e-09 Score=81.01 Aligned_cols=54 Identities=19% Similarity=0.341 Sum_probs=46.0
Q ss_pred CCeeEEEEEEEEecCCCCeEEEEeecC--CceecCCcccCCCCChHHHHHHHHHhhhCC
Q 028063 59 GLRTCVEAVLLVELFKHPHLLLLQVRN--SIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 59 GmRrsV~aVllvh~h~~phVLLLQ~~~--~~fkLPGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
..|++|.++++.+ .-+|||+|+.. +.|.||||++++||+..+|++||+.||+|.
T Consensus 12 ~~~~~v~~~i~~~---~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 67 (165)
T 1f3y_A 12 GYRRNVGICLMNN---DKKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGV 67 (165)
T ss_dssp SCCCEEEEEEECT---TSCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred ceeeeEEEEEECC---CCcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCC
Confidence 4577887776632 24899999864 799999999999999999999999999998
No 47
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=98.81 E-value=6.1e-09 Score=82.98 Aligned_cols=54 Identities=24% Similarity=0.399 Sum_probs=45.3
Q ss_pred CCeeEEEEEEEEecCCCCeEEEEeec-CCceecCCcccCCCCChHHHHHHHHHhhhCC
Q 028063 59 GLRTCVEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 59 GmRrsV~aVllvh~h~~phVLLLQ~~-~~~fkLPGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
..|.+|.+|++.++ -+|||+|+. .+.|.||||.+++||+..+++.||+.||+|.
T Consensus 6 ~~~~~v~~~i~~~~---~~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~ 60 (164)
T 2kdv_A 6 GYRPNVGIVICNRQ---GQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL 60 (164)
T ss_dssp SEEEEEEEEEECTT---SEEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCCcEEEEEEEccC---CEEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCC
Confidence 55777666665322 389999986 4799999999999999999999999999998
No 48
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=98.80 E-value=3.3e-09 Score=84.83 Aligned_cols=105 Identities=16% Similarity=0.156 Sum_probs=65.5
Q ss_pred eeEEEEEEEEecCCCCeEEEEeec-----CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeec
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVR-----NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWK 135 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~-----~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwR 135 (214)
+.+|.++++ ... .+|||+|+. .+.|.||||.+++||+.++|++||+.||+|.. ....+.++.++.
T Consensus 41 ~~~v~v~i~-~~~--~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~-------~~~~~~l~~~~~ 110 (182)
T 2yvp_A 41 VAASFVLPV-TER--GTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAE-------AETLIPLPSFHP 110 (182)
T ss_dssp CEEEEEEEB-CTT--SEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEE-------CSCEEECCCBCS
T ss_pred CCEEEEEEE-cCC--CEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCC-------cccEEEEEEEeC
Confidence 444444443 332 379999875 36899999999999999999999999999982 223345655421
Q ss_pred CCCCCCCCCCCCCCCCCcceeeEEEEEEcCC-ceEEeec--CCCeEEeccchhhhc
Q 028063 136 PDFETLLFPYFPPNVKRPKECTKLFLVKLPV-SQKFFVP--KNLKLLAVPLCQIHE 188 (214)
Q Consensus 136 pnFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe-~~~f~vp--kn~kL~AvPLfely~ 188 (214)
-| +...+...+|++.... ......+ ....+.-+|+=|+.+
T Consensus 111 ----------~~---~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 153 (182)
T 2yvp_A 111 ----------QP---SFTAVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYA 153 (182)
T ss_dssp ----------CT---TTBCCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHH
T ss_pred ----------CC---CccccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHH
Confidence 11 2234566788876422 1111111 224556667766654
No 49
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=98.79 E-value=1.1e-08 Score=83.32 Aligned_cols=52 Identities=10% Similarity=0.218 Sum_probs=42.5
Q ss_pred EEEEEEEecCCCCeEEEEeec-CCceecCCcccCCCCChHHHHHHHHHhhhCCC
Q 028063 64 VEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (214)
Q Consensus 64 V~aVllvh~h~~phVLLLQ~~-~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~ 116 (214)
+.++++++ .+..+|||+|+. .+.|.||||++++||+..+|++||+.||+|..
T Consensus 47 ~~~~vv~~-~~~~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~ 99 (197)
T 3fcm_A 47 TSSAFAVN-KERNKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVK 99 (197)
T ss_dssp EEEEEEEC-TTSCEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCS
T ss_pred EEEEEEEE-CCCCEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCC
Confidence 34444443 334599999886 58999999999999999999999999999983
No 50
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=98.77 E-value=1.6e-08 Score=79.67 Aligned_cols=65 Identities=18% Similarity=0.154 Sum_probs=47.8
Q ss_pred eEEEEEEEEecCCCCeEEEEeecCC----ceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeee
Q 028063 62 TCVEAVLLVELFKHPHLLLLQVRNS----IFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWW 134 (214)
Q Consensus 62 rsV~aVllvh~h~~phVLLLQ~~~~----~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~Ww 134 (214)
+.+.++++. +.+..+|||+|+.++ .|.||||++++||+..+|++||+.||+|. +....+.++.+.
T Consensus 10 ~~~v~~vi~-~~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~~~~~~ 78 (161)
T 3exq_A 10 ELVTMVMVT-DPETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGL-------RLSGVTFCGTCE 78 (161)
T ss_dssp EEEEEEEEB-CTTTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCC-------EESCCEEEEEEE
T ss_pred eEEEEEEEE-eCCCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCc-------EecCCcEEEEEe
Confidence 333344443 333358999998763 56699999999999999999999999998 344456666643
No 51
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=98.77 E-value=1.3e-08 Score=78.68 Aligned_cols=66 Identities=12% Similarity=0.113 Sum_probs=44.7
Q ss_pred eeEEEEEEEEecCCCCeEEEEeecCCc---eecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeee
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVRNSI---FKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~~~~---fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~W 133 (214)
+.+|.+|+.....+...|||.++..+. |.||||++++||+..++++||+.||+|. +..+.+.++..
T Consensus 8 ~~~~~~ii~~~~~~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl-------~~~~~~~~~~~ 76 (155)
T 2b06_A 8 ILTNICLIEDLETQRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGL-------TIQNPQLVGIK 76 (155)
T ss_dssp EEEEEEEEEETTTTEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSE-------EEESCEEEEEE
T ss_pred EEEEEEEEEECCCCeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCc-------cccCCcEEEEE
Confidence 445555554222223448888775422 6999999999999999999999999998 45556666653
No 52
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=98.76 E-value=2.3e-08 Score=78.81 Aligned_cols=105 Identities=13% Similarity=0.151 Sum_probs=64.7
Q ss_pred eeEEEEEEEEecCCCCeEEEEeec------CCcee-cCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeee
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVR------NSIFK-LPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~------~~~fk-LPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~W 133 (214)
.++|.++++. .. -+|||.|+. .+.|. ||||++++||+..++++||+.||+|..-.. ..+ ..++++
T Consensus 34 ~~~v~v~i~~-~~--~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~--~~l---~~~~~~ 105 (171)
T 1q27_A 34 VRVVNAFLRN-SQ--GQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDA--LSW---RPLASF 105 (171)
T ss_dssp CEEEEEEEEE-TT--TEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSS--SCE---EEEEEE
T ss_pred ceEEEEEEEC-CC--CeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccc--cce---EEEEEE
Confidence 4555555543 32 289999874 36798 999999999999999999999999983211 111 245554
Q ss_pred ecCCCCCCCCCCCCCCCCCcceeeEEEEEEcCCceEEeec--CCCeEEeccchhhhc
Q 028063 134 WKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVP--KNLKLLAVPLCQIHE 188 (214)
Q Consensus 134 wRpnFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~vp--kn~kL~AvPLfely~ 188 (214)
. ||--+|- ....+|.+++... +... ....+.-+|+=||.+
T Consensus 106 ~---------~~~~~~~----~~~~~f~~~~~~~--~~~~~~E~~~~~W~~~~el~~ 147 (171)
T 1q27_A 106 S---------PFQTTLS----SFMCVYELRSDAT--PIFNPNDISGGEWLTPEHLLA 147 (171)
T ss_dssp C---------SSSSCCS----SEEEEEEEECCCC--CCSCTTTCSCCEEECHHHHHH
T ss_pred e---------ccCCCCc----cEEEEEEEEECCc--cccCchhhheEEEecHHHHHH
Confidence 3 1111221 1668888887322 2221 123455566666653
No 53
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=98.76 E-value=7.2e-09 Score=83.73 Aligned_cols=58 Identities=17% Similarity=0.138 Sum_probs=43.6
Q ss_pred ccCCeeEEEEEEEEecCCCCeEEEEeec------CCceec-CCcccCCCCChHHHHHHHHHhhhCCC
Q 028063 57 AHGLRTCVEAVLLVELFKHPHLLLLQVR------NSIFKL-PGGRLRPGESDIYGLKRKLTRKLSLN 116 (214)
Q Consensus 57 ~~GmRrsV~aVllvh~h~~phVLLLQ~~------~~~fkL-PGGrl~~gE~e~egLkReL~EeLg~~ 116 (214)
..|+++.+.+|+++... .+|||.|+. .+.|.| |||.+++||+.++|++||+.||+|..
T Consensus 27 ~~~~~~~~v~~~i~~~~--g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~ 91 (190)
T 1hzt_A 27 ADTRLHLAFSSWLFNAK--GQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVE 91 (190)
T ss_dssp ----CEECEEEEEECTT--CCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCC
T ss_pred cCCceEEEEEEEEEcCC--CEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCC
Confidence 45665545555555433 379999985 378999 99999999999999999999999983
No 54
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=98.70 E-value=1.5e-08 Score=77.53 Aligned_cols=52 Identities=19% Similarity=0.391 Sum_probs=42.7
Q ss_pred EEEEEEEecCCCCeEEEEeec-CCceecCCcccCCCCChHHHHHHHHHhhhCCC
Q 028063 64 VEAVLLVELFKHPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (214)
Q Consensus 64 V~aVllvh~h~~phVLLLQ~~-~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~ 116 (214)
+.+++++++ +..+|||+|+. .+.|.||||.+++||+..+++.||+.||+|..
T Consensus 6 ~~~~~i~~~-~~~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~ 58 (146)
T 2jvb_A 6 VRGAAIFNE-NLSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFD 58 (146)
T ss_dssp CEEEEEBCT-TSSEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCC
T ss_pred EEEEEEEeC-CCCEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCC
Confidence 344454433 23599999986 58999999999999999999999999999983
No 55
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=98.68 E-value=2.7e-08 Score=82.18 Aligned_cols=63 Identities=17% Similarity=0.244 Sum_probs=48.7
Q ss_pred EEEEEEEEecCCCCeEEEEeec-----CCceecCCcccC-CCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeee
Q 028063 63 CVEAVLLVELFKHPHLLLLQVR-----NSIFKLPGGRLR-PGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWW 134 (214)
Q Consensus 63 sV~aVllvh~h~~phVLLLQ~~-----~~~fkLPGGrl~-~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~Ww 134 (214)
.+.+|+++. ...+|||+|+. .+.|.||||.++ +||+.+++++|||.||+|. +....+.++.++
T Consensus 44 ~av~v~i~~--~~~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl-------~~~~~~~l~~~~ 112 (207)
T 1mk1_A 44 GAVAIVAMD--DNGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGL-------QASTWQVLVDLD 112 (207)
T ss_dssp CEEEEEECC--TTSEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCE-------EEEEEEEEEEEC
T ss_pred CEEEEEEEc--CCCEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCC-------cccccEEEEEEE
Confidence 344555443 23589999864 358999999999 9999999999999999998 555666777653
No 56
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=98.67 E-value=2.6e-08 Score=86.88 Aligned_cols=62 Identities=16% Similarity=0.303 Sum_probs=49.1
Q ss_pred hhcccCCeeEEEEEEEEecCCCCeEEEEeec--CCceecCCcccCCCCChHHHHHHHHHhhhCCC
Q 028063 54 NYDAHGLRTCVEAVLLVELFKHPHLLLLQVR--NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (214)
Q Consensus 54 ~y~~~GmRrsV~aVllvh~h~~phVLLLQ~~--~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~ 116 (214)
.|.+.-.+..|.|+++++. ...+|||+|+. .+.|.||||++++||+.++|++||+.||+|..
T Consensus 93 ~~~~~~~~v~~v~avv~~~-~~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~ 156 (271)
T 2a6t_A 93 DFLRYKTRIPVRGAIMLDM-SMQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFD 156 (271)
T ss_dssp HHHHHSCCCCEEEEEEBCS-SSSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred HHHhcCCCCCeEEEEEEEC-CCCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCC
Confidence 3444444566777776543 23599999985 47899999999999999999999999999984
No 57
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=98.66 E-value=1.8e-08 Score=78.36 Aligned_cols=56 Identities=23% Similarity=0.248 Sum_probs=43.9
Q ss_pred CeeEEEEEEEEecCCCCeEEEEeecC-----CceecCCcccCCCCChH-HHHHHHHHhhhC-C
Q 028063 60 LRTCVEAVLLVELFKHPHLLLLQVRN-----SIFKLPGGRLRPGESDI-YGLKRKLTRKLS-L 115 (214)
Q Consensus 60 mRrsV~aVllvh~h~~phVLLLQ~~~-----~~fkLPGGrl~~gE~e~-egLkReL~EeLg-~ 115 (214)
.|..+.+||+......-+|||.|+.. |.|.||||++++||+.. +++.|++.||+| .
T Consensus 18 ~~~~~~~vi~~~~~~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l 80 (155)
T 1x51_A 18 EESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPL 80 (155)
T ss_dssp EEEEEEEEEEEECSSSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCC
T ss_pred eEEEEEEEEEecCCCCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCc
Confidence 35566666654321134899999863 68999999999999996 999999999999 5
No 58
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=98.60 E-value=1.7e-07 Score=77.77 Aligned_cols=106 Identities=12% Similarity=0.120 Sum_probs=67.6
Q ss_pred EEEEEEEEecCCCCeEEEEee-c---------CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeee
Q 028063 63 CVEAVLLVELFKHPHLLLLQV-R---------NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (214)
Q Consensus 63 sV~aVllvh~h~~phVLLLQ~-~---------~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~ 132 (214)
.+.+|++++. +..+|||++. . .+.|.||||++++||++++|++|||.||+|... ..+ +.|+.
T Consensus 58 ~av~vl~~~~-~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~----~~~---~~l~~ 129 (209)
T 1g0s_A 58 HAAVLLPFDP-VRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIV----KRT---KPVLS 129 (209)
T ss_dssp CEEEEEEEET-TTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCC----CCE---EEEEE
T ss_pred CEEEEEEEEC-CCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCccc----CcE---EEeEE
Confidence 4555555542 2348999854 2 246899999999999999999999999999832 123 35665
Q ss_pred eecCCCCCCCCCCCCCCCCCcceeeEEEEEEcCCce--E-E---eecCCCeEEeccchhhhcC
Q 028063 133 WWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQ--K-F---FVPKNLKLLAVPLCQIHEN 189 (214)
Q Consensus 133 WwRpnFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~--~-f---~vpkn~kL~AvPLfely~N 189 (214)
+|.. |. ...|...+|++...... - . .-.....+.-+|+=|+.+-
T Consensus 130 ~~~~----------~g---~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~ 179 (209)
T 1g0s_A 130 FLAS----------PG---GTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQW 179 (209)
T ss_dssp EESC----------TT---TBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHH
T ss_pred EecC----------CC---ccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHH
Confidence 4311 11 12466788988863221 1 1 1112357888898888763
No 59
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=98.60 E-value=5.8e-08 Score=76.87 Aligned_cols=101 Identities=18% Similarity=0.241 Sum_probs=65.0
Q ss_pred EEEEEEEecCCCCeEEEEeec-----CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeecCCC
Q 028063 64 VEAVLLVELFKHPHLLLLQVR-----NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKPDF 138 (214)
Q Consensus 64 V~aVllvh~h~~phVLLLQ~~-----~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwRpnF 138 (214)
+.+|++++ ..+|||+|+. .+.|.||||.+++||+.+++++||+.||+|. ....+.++.++..
T Consensus 36 ~v~vii~~---~~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl--------~~~~~~l~~~~~~-- 102 (170)
T 1v8y_A 36 AVAVIALR---EGRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL--------SGDLTYLFSYFVS-- 102 (170)
T ss_dssp EEEEEEEE---TTEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE--------EEEEEEEEEEESC--
T ss_pred eEEEEEEE---CCEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC--------CcCceeeEEEecC--
Confidence 45555555 2389999863 3589999999999999999999999999996 2334567776421
Q ss_pred CCCCCCCCCCCCCCcceeeEEEEEEcCCceEEee--cCCCeEEeccchhhhc
Q 028063 139 ETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFV--PKNLKLLAVPLCQIHE 188 (214)
Q Consensus 139 e~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~v--pkn~kL~AvPLfely~ 188 (214)
|. ...+...+|.+.......... .....+.-+|+=|+-+
T Consensus 103 --------~~---~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 143 (170)
T 1v8y_A 103 --------PG---FTDEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALE 143 (170)
T ss_dssp --------TT---TBCCEEEEEEEEEEEECC--------CEEEEECHHHHHH
T ss_pred --------CC---ccccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHH
Confidence 11 123556788877644322221 1234566677766654
No 60
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=98.58 E-value=1.3e-07 Score=78.28 Aligned_cols=108 Identities=14% Similarity=0.212 Sum_probs=67.0
Q ss_pred EEEEEEEEecC-CCCeEEEEee-c----CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeecC
Q 028063 63 CVEAVLLVELF-KHPHLLLLQV-R----NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWKP 136 (214)
Q Consensus 63 sV~aVllvh~h-~~phVLLLQ~-~----~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwRp 136 (214)
+|..+.++.+. +..+|||++. . .+.|.||||.+++||++.+|++|||.||+|. ...+.+.++.++..
T Consensus 63 av~v~~v~~~~~~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl-------~~~~~~~l~~~~~~ 135 (212)
T 2dsc_A 63 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGY-------KGDIAECSPAVCMD 135 (212)
T ss_dssp EEEEEEEEECTTSCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCC-------CCEEEEECCCEESC
T ss_pred EEEEEEEEeCCCCCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCC-------CccceEEeccEEcC
Confidence 44444444332 2568998874 2 2479999999999999999999999999998 34445556554321
Q ss_pred CCCCCCCCCCCCCCCCcceeeEEEEEEcC--Cce----EEee--cCCCeEEeccchhhhcCc
Q 028063 137 DFETLLFPYFPPNVKRPKECTKLFLVKLP--VSQ----KFFV--PKNLKLLAVPLCQIHENH 190 (214)
Q Consensus 137 nFe~~~yPYlP~Hit~pKE~~kl~~V~Lp--e~~----~f~v--pkn~kL~AvPLfely~N~ 190 (214)
| ....|...+|++.+. ... .... .....+.-+|+=|+.+..
T Consensus 136 ----------~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~ 184 (212)
T 2dsc_A 136 ----------P---GLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRL 184 (212)
T ss_dssp ----------T---TTBCCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHH
T ss_pred ----------C---CccCceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHH
Confidence 1 112355677776532 110 1111 144567778887776543
No 61
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=98.56 E-value=1.1e-07 Score=84.90 Aligned_cols=53 Identities=13% Similarity=0.217 Sum_probs=47.4
Q ss_pred CCCCeEEEEeecC-CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeee
Q 028063 73 FKHPHLLLLQVRN-SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (214)
Q Consensus 73 h~~phVLLLQ~~~-~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~ 132 (214)
.+..+|||+|+.. +.|.||||++++||+..+|++||+.||+|. +.+++++++.
T Consensus 35 ~~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl-------~~~~~~~l~~ 88 (364)
T 3fjy_A 35 LDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGS-------PVKLGPYLCE 88 (364)
T ss_dssp HTTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSC-------CEEEEEEEEE
T ss_pred CCceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCC-------eeeeccccce
Confidence 3467999999864 899999999999999999999999999998 6778888875
No 62
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.55 E-value=1.7e-07 Score=82.11 Aligned_cols=50 Identities=26% Similarity=0.471 Sum_probs=42.0
Q ss_pred eEEEEEEEEecCCCCeEEEEeecC----CceecCCcccCCCCChHHHHHHHHHhhhCC
Q 028063 62 TCVEAVLLVELFKHPHLLLLQVRN----SIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 62 rsV~aVllvh~h~~phVLLLQ~~~----~~fkLPGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
.+|.+|++ ++ .+|||+|+.. +.|.||||++++||+.+++++||+.||+|.
T Consensus 209 ~~v~~vv~-~~---~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl 262 (352)
T 2qjt_B 209 VTVDALVI-VN---DHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNI 262 (352)
T ss_dssp EEEEEEEE-ET---TEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCC
T ss_pred eEEEEEEE-EC---CEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCC
Confidence 44555444 33 4899999863 789999999999999999999999999998
No 63
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=98.55 E-value=3.3e-08 Score=84.35 Aligned_cols=64 Identities=20% Similarity=0.453 Sum_probs=50.0
Q ss_pred CeeEEEEEEEEecCCCCeEEEEeecC--------Cceec-CCcccCCCCC--h----HHHHHHHHHhhhCCCCCCCCcce
Q 028063 60 LRTCVEAVLLVELFKHPHLLLLQVRN--------SIFKL-PGGRLRPGES--D----IYGLKRKLTRKLSLNEDGGEVDW 124 (214)
Q Consensus 60 mRrsV~aVllvh~h~~phVLLLQ~~~--------~~fkL-PGGrl~~gE~--e----~egLkReL~EeLg~~~~~~~~~~ 124 (214)
.+..|-++++.++. +|||+|+.. +.|.+ |||++++||+ + ++|++|||.||+|. ++
T Consensus 66 ~~q~i~~~II~~~g---rvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl-------~v 135 (211)
T 3e57_A 66 TKQVIPYVVIMDGD---RVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDV-------SL 135 (211)
T ss_dssp EEEEEEEEEEEETT---EEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEE-------EE
T ss_pred ccceEEEEEEEECC---EEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCC-------ee
Confidence 36666666665543 899999953 46888 9999999999 6 99999999999998 67
Q ss_pred EEceeeeee
Q 028063 125 EVGECLGMW 133 (214)
Q Consensus 125 eVge~Lg~W 133 (214)
++..++|..
T Consensus 136 ~~~~~ig~~ 144 (211)
T 3e57_A 136 RELEFLGLI 144 (211)
T ss_dssp EEEEEEEEE
T ss_pred eccEEEEEE
Confidence 888888874
No 64
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=98.55 E-value=1.2e-07 Score=82.48 Aligned_cols=51 Identities=25% Similarity=0.492 Sum_probs=43.4
Q ss_pred eeEEEEEEEEecCCCCeEEEEeec----CCceecCCcccCCCCChHHHHHHHHHhhhCC
Q 028063 61 RTCVEAVLLVELFKHPHLLLLQVR----NSIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 61 RrsV~aVllvh~h~~phVLLLQ~~----~~~fkLPGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
+.+|.+|++ ++ .+|||+|+. .+.|.||||.+++||+.++|++||+.||+|.
T Consensus 203 ~~~v~~vi~-~~---~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl 257 (341)
T 2qjo_A 203 FITTDAVVV-QA---GHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRL 257 (341)
T ss_dssp EEEEEEEEE-ET---TEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCC
T ss_pred ceEEEEEEE-eC---CEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCC
Confidence 456666665 33 489999986 4789999999999999999999999999998
No 65
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=98.55 E-value=7.9e-08 Score=84.10 Aligned_cols=62 Identities=13% Similarity=0.108 Sum_probs=49.4
Q ss_pred EEEEEEEEecCCCCeEEEEeec---CCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeee
Q 028063 63 CVEAVLLVELFKHPHLLLLQVR---NSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMW 133 (214)
Q Consensus 63 sV~aVllvh~h~~phVLLLQ~~---~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~W 133 (214)
++.+++++... -+|||.|+. .+.|.||||.+++||+.++++.||+.||+|. ++...++++..
T Consensus 140 ~~~viv~v~~~--~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl-------~v~~~~~~~~~ 204 (269)
T 1vk6_A 140 APCIIVAIRRD--DSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGI-------KVKNLRYVTSQ 204 (269)
T ss_dssp EEEEEEEEEET--TEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCC-------EEEEEEEEEEE
T ss_pred CcEEEEEEEeC--CEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCc-------eeeeEEEEEEE
Confidence 34444444433 499999986 3799999999999999999999999999998 56666777764
No 66
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=98.51 E-value=2.7e-07 Score=76.86 Aligned_cols=121 Identities=20% Similarity=0.251 Sum_probs=75.7
Q ss_pred HhhcccCCeeEEEEEEEEec--------CCCCeEEEEeecCCceecCCcccCCCC-ChHHHHHHHHHhhhCCCCCCCCcc
Q 028063 53 SNYDAHGLRTCVEAVLLVEL--------FKHPHLLLLQVRNSIFKLPGGRLRPGE-SDIYGLKRKLTRKLSLNEDGGEVD 123 (214)
Q Consensus 53 ~~y~~~GmRrsV~aVllvh~--------h~~phVLLLQ~~~~~fkLPGGrl~~gE-~e~egLkReL~EeLg~~~~~~~~~ 123 (214)
+.....+.++++.+++.... .+..+|||.|+..+.|.||||++++|| +.++|++|||.||+|..-.. ..
T Consensus 25 ~~~~~~~~~~~~~~~l~~~~~~vv~~i~~~~~~vLl~~r~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~--~~ 102 (212)
T 1u20_A 25 ESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLMMMRFDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALAT--VE 102 (212)
T ss_dssp HHHSCSSCEEEEEEEEEEECCCEETTTEECCEEEEEEEETTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGG--CC
T ss_pred HHhhcCCCcccceEEEeCCCceEEEEEEecCCEEEEEEeCCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccc--cc
Confidence 44444567888877775421 123478888887899999999999999 99999999999999983110 01
Q ss_pred eEEceeeeeeecCCCCCCCCCCCCCCCCCcceeeEEEEEEcCCceEEe---------ec--CCCeEEeccchhhhcC
Q 028063 124 WEVGECLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFF---------VP--KNLKLLAVPLCQIHEN 189 (214)
Q Consensus 124 ~eVge~Lg~WwRpnFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~---------vp--kn~kL~AvPLfely~N 189 (214)
..+.++++.... .|| -.....+|++.+.....-. -. .-+.+.-+|+=+|.+.
T Consensus 103 l~~~~~~~~~~~------~~~--------~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 103 VTEDDYRSSQVR------EHP--------QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp CCGGGEEEEEEE------CTT--------SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred eeeeeEEEeccc------cCC--------CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 112334554321 122 1345678888876432100 01 1134677888777553
No 67
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=98.45 E-value=2.3e-07 Score=75.76 Aligned_cols=103 Identities=15% Similarity=0.208 Sum_probs=65.5
Q ss_pred EEEEEEEecCCCCeEEEEee-----------cCCceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeee
Q 028063 64 VEAVLLVELFKHPHLLLLQV-----------RNSIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (214)
Q Consensus 64 V~aVllvh~h~~phVLLLQ~-----------~~~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~ 132 (214)
..+|++.+. ...+|||++. ..+.|.||||+++ ||+..+|++|||.||+|.. ....+.++.
T Consensus 47 av~v~~~~~-~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~-------~~~~~~l~~ 117 (191)
T 3o6z_A 47 GATILLYNT-KKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYE-------VGEVRKLFE 117 (191)
T ss_dssp EEEEEEEET-TTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CC-------CSCEEEEEE
T ss_pred EEEEEEEEC-CCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCc-------cCcEEEEEE
Confidence 444554443 2358998875 3467999999999 9999999999999999983 222345665
Q ss_pred eecCCCCCCCCCCCCCCCCCcceeeEEEEEEcCCceEEe-----ecCCCeEEeccchhhhc
Q 028063 133 WWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFF-----VPKNLKLLAVPLCQIHE 188 (214)
Q Consensus 133 WwRpnFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~-----vpkn~kL~AvPLfely~ 188 (214)
.+.. | ....+...+|++......... -.....+.-+|+=|+.+
T Consensus 118 ~~~~----------~---~~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~ 165 (191)
T 3o6z_A 118 LYMS----------P---GGVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALE 165 (191)
T ss_dssp EESC----------T---TTBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHH
T ss_pred EEeC----------C---CccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHH
Confidence 4321 1 123456788888765422111 12456777788877765
No 68
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.40 E-value=4.3e-07 Score=79.91 Aligned_cols=41 Identities=22% Similarity=0.368 Sum_probs=38.0
Q ss_pred CCeEEEEeec-CCceecCCcccCCCCChHHHHHHHHHhhhCC
Q 028063 75 HPHLLLLQVR-NSIFKLPGGRLRPGESDIYGLKRKLTRKLSL 115 (214)
Q Consensus 75 ~phVLLLQ~~-~~~fkLPGGrl~~gE~e~egLkReL~EeLg~ 115 (214)
..+|||+|+. .+.|.||||.+++||+..++++|||.||+|.
T Consensus 138 ~l~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl 179 (292)
T 1q33_A 138 ILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALN 179 (292)
T ss_dssp CEEEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSC
T ss_pred ceEEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 4589999986 5899999999999999999999999999997
No 69
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.39 E-value=1.2e-07 Score=81.45 Aligned_cols=112 Identities=24% Similarity=0.267 Sum_probs=75.6
Q ss_pred cCCeeEEEEEEEEecCC-------CCeEEEEeec-CCceecCCcccCCCC-ChHHHHHHHHHhhhCCCCCCCCcceEEce
Q 028063 58 HGLRTCVEAVLLVELFK-------HPHLLLLQVR-NSIFKLPGGRLRPGE-SDIYGLKRKLTRKLSLNEDGGEVDWEVGE 128 (214)
Q Consensus 58 ~GmRrsV~aVllvh~h~-------~phVLLLQ~~-~~~fkLPGGrl~~gE-~e~egLkReL~EeLg~~~~~~~~~~eVge 128 (214)
.|.|+++.+.+-+.+.+ .-+.+|+|.. .|.|.||||++++|| +.++||+|||.||+|.. .++.++
T Consensus 18 ~~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~------~V~~~~ 91 (214)
T 3kvh_A 18 PGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCL------RLTEAD 91 (214)
T ss_dssp TTCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC---------CCCGGG
T ss_pred cCccEeeEEEEEcCCccccccccchhheEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCe------eeeeee
Confidence 47899999998875422 1356777775 689999999999999 99999999999999962 234444
Q ss_pred eeeeeecCCCCCCCCCCCCCCCCCcceeeEEEEEEcCCceEEeec------C-----CCeEEeccchhhhcC
Q 028063 129 CLGMWWKPDFETLLFPYFPPNVKRPKECTKLFLVKLPVSQKFFVP------K-----NLKLLAVPLCQIHEN 189 (214)
Q Consensus 129 ~Lg~WwRpnFe~~~yPYlP~Hit~pKE~~kl~~V~Lpe~~~f~vp------k-----n~kL~AvPLfely~N 189 (214)
++.+-. .-|| .+| +-.+|.+++.+.....+- + ++=++-|||+.+-|.
T Consensus 92 y~~s~~------~~yp---~~V-----~LHfY~crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPlytl~D~ 149 (214)
T 3kvh_A 92 YLSSHL------TEGP---HRV-----VAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQKDR 149 (214)
T ss_dssp EEEEEE------C-------CE-----EEEEEEEECCHHHHHHHHHHHHTSTTBTTTEEEEEEECCCBCTTS
T ss_pred eEEEEe------ccCC---CEE-----EEEEEEEEeeCCccchhhhcccCCcccCceecceEEeeeEEeccC
Confidence 444321 1244 244 346888888765533221 2 345899999999885
No 70
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=98.37 E-value=1.7e-07 Score=84.61 Aligned_cols=50 Identities=12% Similarity=0.191 Sum_probs=43.2
Q ss_pred CCeEEEEeecC-----CceecCCcccCCCCChHHHHHHHHHhhhCCCCCCCCcceEEceeeee
Q 028063 75 HPHLLLLQVRN-----SIFKLPGGRLRPGESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGM 132 (214)
Q Consensus 75 ~phVLLLQ~~~-----~~fkLPGGrl~~gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~ 132 (214)
.-+|||.|+.+ |.|.||||++++| ++++++.||+.||+|. +.++.+.++.
T Consensus 251 ~g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl-------~v~~~~~l~~ 305 (369)
T 3fsp_A 251 EGRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGL-------QVELTEPIVS 305 (369)
T ss_dssp SSEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSC-------CEEECCCCCE
T ss_pred CCEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCC-------ceeeeccccc
Confidence 34899999863 6899999999999 9999999999999998 5666766665
No 71
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.20 E-value=1.1e-06 Score=74.27 Aligned_cols=96 Identities=19% Similarity=0.254 Sum_probs=62.2
Q ss_pred eEEEEeecCCceecCCcccCCCC-ChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeec-CCCCCCCCCCCCCCCCCcc
Q 028063 77 HLLLLQVRNSIFKLPGGRLRPGE-SDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWK-PDFETLLFPYFPPNVKRPK 154 (214)
Q Consensus 77 hVLLLQ~~~~~fkLPGGrl~~gE-~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwR-pnFe~~~yPYlP~Hit~pK 154 (214)
.+||+++..+.|.||||++++|| +.++|++|||.||+|..... ..+. .++.+.. +.+ .+.
T Consensus 66 ~~ll~~r~~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~--~~l~---~l~~~~~~~~~-------------~~~ 127 (217)
T 2xsq_A 66 AILMQMRFDGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAA--FRVE---RTDYRSSHVGS-------------GPR 127 (217)
T ss_dssp EEEEEEETTSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGG--CCCC---GGGEEEEEECS-------------SSS
T ss_pred cEEEEEccCCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCcc--ceeE---EEEEEeecCCC-------------CCe
Confidence 56777777889999999999999 99999999999999983110 0111 1122211 111 124
Q ss_pred eeeEEEEEEcCCceEEe--------e---cCCCeEEeccchhhhcCc
Q 028063 155 ECTKLFLVKLPVSQKFF--------V---PKNLKLLAVPLCQIHENH 190 (214)
Q Consensus 155 E~~kl~~V~Lpe~~~f~--------v---pkn~kL~AvPLfely~N~ 190 (214)
+..-.|.+.++...... . +.-+.+..|||-+|.|..
T Consensus 128 ~~~~~f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d~~ 174 (217)
T 2xsq_A 128 VVAHFYAKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLRDGV 174 (217)
T ss_dssp EEEEEEEEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTTSS
T ss_pred EEEEEEEEEeccccceecccccccccccCCceeeEEEEEHHHhhhcc
Confidence 56677888876543210 0 122678889999997643
No 72
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=98.08 E-value=3.1e-06 Score=71.73 Aligned_cols=85 Identities=12% Similarity=0.137 Sum_probs=53.7
Q ss_pred CCceecCCcccCC-CCChHHHHHHHHHhhhCCCCCCCCcceEEceeeeeeec-CCCCCCCCCCCCCCCCCcceeeEEEEE
Q 028063 85 NSIFKLPGGRLRP-GESDIYGLKRKLTRKLSLNEDGGEVDWEVGECLGMWWK-PDFETLLFPYFPPNVKRPKECTKLFLV 162 (214)
Q Consensus 85 ~~~fkLPGGrl~~-gE~e~egLkReL~EeLg~~~~~~~~~~eVge~Lg~WwR-pnFe~~~yPYlP~Hit~pKE~~kl~~V 162 (214)
.+.|.||||.+++ ||++++|++|||.||+|... ....+ ..++.++. |.+ ..+...+|++
T Consensus 94 ~~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~--~~~~l---~~l~~~~~~~g~--------------~~~~~~~f~a 154 (218)
T 3q91_A 94 GVTVELCAGLVDQPGLSLEEVACKEAWEECGYHL--APSDL---RRVATYWSGVGL--------------TGSRQTMFYT 154 (218)
T ss_dssp CEEEECEEEECCSSSCCHHHHHHHHHHHHHCBCC--CGGGC---EEEEEEEEC-----------------CCEEEEEEEE
T ss_pred CeEEECCcceeCCCCCCHHHHHHHHHHHHhCCcc--ccCce---EEEEEEecCCCc--------------cceEEEEEEE
Confidence 3588999999999 99999999999999999831 01233 35555432 221 2456677777
Q ss_pred EcCCceEE-------eecCCCeEEeccchhhhc
Q 028063 163 KLPVSQKF-------FVPKNLKLLAVPLCQIHE 188 (214)
Q Consensus 163 ~Lpe~~~f-------~vpkn~kL~AvPLfely~ 188 (214)
........ .=.....+.-+|+=|+.+
T Consensus 155 ~~~~~~~~~~~~~~~d~~E~~ev~wv~l~el~~ 187 (218)
T 3q91_A 155 EVTDAQRSGPGGGLVEEGELIEVVHLPLEGAQA 187 (218)
T ss_dssp EECGGGBCC---------CCEEEEEEEGGGHHH
T ss_pred EECCcccccCCCCCCCCCcEEEEEEEEHHHHHH
Confidence 75432211 111355677777777665
No 73
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.06 E-value=2.1e-06 Score=73.78 Aligned_cols=57 Identities=14% Similarity=0.314 Sum_probs=45.7
Q ss_pred CeeEEEEEEEEecCCC-CeEEEEeecC------CceecCCcccCCCCCh--------------------HHHHHHHHHhh
Q 028063 60 LRTCVEAVLLVELFKH-PHLLLLQVRN------SIFKLPGGRLRPGESD--------------------IYGLKRKLTRK 112 (214)
Q Consensus 60 mRrsV~aVllvh~h~~-phVLLLQ~~~------~~fkLPGGrl~~gE~e--------------------~egLkReL~Ee 112 (214)
.|.++..|++....+. ++|||+|+.. |.|-||||++++||++ .+|..||+.||
T Consensus 7 ~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 7 IRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 3666666666543333 8999999973 6899999999999985 79999999999
Q ss_pred hCCC
Q 028063 113 LSLN 116 (214)
Q Consensus 113 Lg~~ 116 (214)
+|+.
T Consensus 87 ~Gl~ 90 (232)
T 3qsj_A 87 IGWL 90 (232)
T ss_dssp HSCC
T ss_pred hCce
Confidence 9973
No 74
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=97.84 E-value=7.5e-05 Score=63.65 Aligned_cols=58 Identities=21% Similarity=0.209 Sum_probs=44.8
Q ss_pred ccCCeeEEEEEEEEecCCCCeEEEEeecC------CceecC-CcccCCC------CCh---HHHHHHHHHhhhCCC
Q 028063 57 AHGLRTCVEAVLLVELFKHPHLLLLQVRN------SIFKLP-GGRLRPG------ESD---IYGLKRKLTRKLSLN 116 (214)
Q Consensus 57 ~~GmRrsV~aVllvh~h~~phVLLLQ~~~------~~fkLP-GGrl~~g------E~e---~egLkReL~EeLg~~ 116 (214)
+.|+.+.+.+|++.... -+|||.|+.. |.|.+| ||.+++| |++ .++++|||.||+|..
T Consensus 54 ~~g~~h~av~v~v~~~~--g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~ 127 (235)
T 2dho_A 54 EKGLLHRAFSVFLFNTE--NKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIP 127 (235)
T ss_dssp TTTCCEEEEEEEEECTT--CCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCC
T ss_pred CCCceEEEEEEEEEcCC--CEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCC
Confidence 45776666666665433 3788888753 589999 5999999 775 899999999999984
No 75
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=97.76 E-value=4.4e-05 Score=65.65 Aligned_cols=58 Identities=17% Similarity=0.181 Sum_probs=45.1
Q ss_pred ccCCeeEEEEEEEEecCCCCeEEEEeecC------CceecCC-cccCCC------CCh---HHHHHHHHHhhhCCC
Q 028063 57 AHGLRTCVEAVLLVELFKHPHLLLLQVRN------SIFKLPG-GRLRPG------ESD---IYGLKRKLTRKLSLN 116 (214)
Q Consensus 57 ~~GmRrsV~aVllvh~h~~phVLLLQ~~~------~~fkLPG-Grl~~g------E~e---~egLkReL~EeLg~~ 116 (214)
+.|+.+.+.+|++.... -+|||.|+.. |.|.+|+ |.+++| |+. .+|++|||.||+|..
T Consensus 65 ~~g~~h~av~v~v~~~~--g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~ 138 (246)
T 2pny_A 65 EKGLLHRAFSVVLFNTK--NRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIP 138 (246)
T ss_dssp TTTCCEEEEEEEEECTT--CCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEEEEEEEEeCC--CEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCC
Confidence 45776666666665433 3788888753 5799995 999999 887 899999999999984
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=97.50 E-value=0.00011 Score=65.84 Aligned_cols=64 Identities=13% Similarity=0.111 Sum_probs=48.5
Q ss_pred CCeeEEEEEEEEecCCCCeEEEEeecCCceecCCcccCCCCChHHHHHHHHHhhh-CCCCCCCCcceEEceeeeeeecCC
Q 028063 59 GLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTRKL-SLNEDGGEVDWEVGECLGMWWKPD 137 (214)
Q Consensus 59 GmRrsV~aVllvh~h~~phVLLLQ~~~~~fkLPGGrl~~gE~e~egLkReL~EeL-g~~~~~~~~~~eVge~Lg~WwRpn 137 (214)
+.+..| |+|+.++. +|||+ ..+| |.||||.+ +|++.++..||..||. |. +++++..++.|=.+.
T Consensus 181 ~p~~~v-gaii~~~g---~vLL~-~~~G-W~LPG~~~--~~~~~~~a~RE~~EEttGl-------~v~~~~L~~v~~~~~ 245 (321)
T 3rh7_A 181 EGEIRL-GAVLEQQG---AVFLA-GNET-LSLPNCTV--EGGDPARTLAAYLEQLTGL-------NVTIGFLYSVYEDKS 245 (321)
T ss_dssp HSCEEE-EEEEESSS---CEEEB-CSSE-EBCCEEEE--SSSCHHHHHHHHHHHHHSS-------CEEEEEEEEEEECTT
T ss_pred CCcceE-EEEEEECC---EEEEe-eCCC-ccCCcccC--CCChhHHHHHHHHHHhcCC-------EEeeceEEEEEEcCC
Confidence 455555 66665543 88888 5567 99999866 4555568999999998 98 899999999876544
No 77
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=97.35 E-value=0.0003 Score=62.71 Aligned_cols=59 Identities=15% Similarity=0.039 Sum_probs=47.5
Q ss_pred cCC-eeEEEEEEEEecCCCCeEEEEeecC------Cce-ecCCcccCCCCChHHHHHHHHHhhhCCC
Q 028063 58 HGL-RTCVEAVLLVELFKHPHLLLLQVRN------SIF-KLPGGRLRPGESDIYGLKRKLTRKLSLN 116 (214)
Q Consensus 58 ~Gm-RrsV~aVllvh~h~~phVLLLQ~~~------~~f-kLPGGrl~~gE~e~egLkReL~EeLg~~ 116 (214)
.|+ .++|...+++.+.+..++|+-|+.. |.| .++||.+++||+..+|+.||+.||+|..
T Consensus 114 ~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~ 180 (300)
T 3dup_A 114 FGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLP 180 (300)
T ss_dssp GTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCC
T ss_pred cceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 466 4666666666555556888888863 678 6999999999999999999999999984
No 78
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=61.79 E-value=1.1 Score=34.94 Aligned_cols=49 Identities=22% Similarity=0.376 Sum_probs=31.6
Q ss_pred CCeeEEEEEEEEecCCCCeEEEEeecCCceecCCcccCCCCChHHHHHHHHHh---hhCCCCCCCCcceEEce
Q 028063 59 GLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIYGLKRKLTR---KLSLNEDGGEVDWEVGE 128 (214)
Q Consensus 59 GmRrsV~aVllvh~h~~phVLLLQ~~~~~fkLPGGrl~~gE~e~egLkReL~E---eLg~~~~~~~~~~eVge 128 (214)
.++..+.+||++|.| |.|-.+|.+.+++ +-|+|.+ -+|. ...+.+-||+
T Consensus 63 Al~~~A~~vIl~HNH-----------------PSG~~~PS~~D~~-~T~~l~~a~~ll~I---~llDHiIig~ 114 (126)
T 2qlc_A 63 AIRESAHSIILVHNH-----------------PSGDVQPSNADKQ-VTSILKKAGDLLQI---ELLDHVIVGN 114 (126)
T ss_dssp HHHTTCSEEEEEEEC-----------------SSSCCSCCHHHHH-HHHHHHHHHHHHTC---EEEEEEEECS
T ss_pred HHHcCCcEEEEEecC-----------------CCCCCCCCHHHHH-HHHHHHHHHHHCCC---eEeeeEEEeC
Confidence 344556899999998 8899999887765 3444444 4443 2233455554
Done!