Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>028075
MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKITTPILTSPPPTESSLTDI
LVRRSSTSSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQ
RFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIK
PLAVTTTRSEVSCSSSSLQKDDKLESSSTEGKLD

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028075
        (214 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2155041 - symbol:AT5G66290 "AT5G66290" species...   573  1.4e-55   1


>TAIR|locus:2155041 [details] [associations]
            symbol:AT5G66290 "AT5G66290" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] EMBL:CP002688 EMBL:AB022211
            UniGene:At.46822 IPI:IPI00517719 RefSeq:NP_201430.1 PRIDE:Q9FH60
            EnsemblPlants:AT5G66290.1 GeneID:836761 KEGG:ath:AT5G66290
            TAIR:At5g66290 HOGENOM:HOG000240384 InParanoid:Q9FH60 OMA:EVISNCD
            PhylomeDB:Q9FH60 ProtClustDB:CLSN2686690 ArrayExpress:Q9FH60
            Genevestigator:Q9FH60 Uniprot:Q9FH60
        Length = 202

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 114/186 (61%), Positives = 149/186 (80%)

Query:     1 MGASESTLSSPQSQRPIDDITTVSYKSESVDPILENIKSLKXXXXXXXXXXXXXXXXXDI 60
             MGAS+STL   Q  R  D ITT+S++SE VDPILEN+K+L                  DI
Sbjct:     1 MGASDSTLLGSQENRG-DVITTISHRSEIVDPILENLKAL-TVSRPILKSPPTESSLTDI 58

Query:    61 LVRRSSTSSASGTVNPKVLLELFSMYRDWQEEKAKQISKRQEEIENKIEVADALATKLLQ 120
             LVR++ +SS+S TV+P++L+ELFS+YR+WQE KA++I+KRQE+IENKIEVADALATKLLQ
Sbjct:    59 LVRKALSSSSSNTVDPQILVELFSIYREWQENKAQEITKRQEDIENKIEVADALATKLLQ 118

Query:   121 RFGYSVSAMKTSSQHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPDSLKASIK 180
             RF +SVSAM+T++QHLS+VH LQVE+GELKGRLTEVISNCD LCKRI +EGP+SL++++ 
Sbjct:   119 RFNHSVSAMRTTAQHLSQVHGLQVELGELKGRLTEVISNCDTLCKRINSEGPESLRSTVA 178

Query:   181 PLAVTT 186
             P ++ +
Sbjct:   179 PFSLAS 184


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.308   0.124   0.321    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      214       188   0.00087  110 3  10 23  0.40    33
                                                     31  0.42    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  187 KB (2108 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.37u 0.13s 26.50t   Elapsed:  00:00:02
  Total cpu time:  26.37u 0.13s 26.50t   Elapsed:  00:00:02
  Start:  Fri May 10 01:26:43 2013   End:  Fri May 10 01:26:45 2013

Back to top