BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028078
(214 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 31/217 (14%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPE-----GANVPAFYVTLETGAY 57
R +CNF K+ NAQ AGY AAIV+ + LI M + ++P+ ++ +
Sbjct: 99 RLECNFDIKVLNAQRAGYKAAIVHNVDSDD-LISMGSNDIEILKKIDIPSVFIGEASANS 157
Query: 58 LKEHARGEAGECCIF------PLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPI 111
LKE E G + PL Y + +I+ G+ L+ ++ I ++ F + +
Sbjct: 158 LKEEFTYEKGGHVVLIPEFSLPLEYYL---IPFLIIVGICLILIV-IFMITKFVQDRHRA 213
Query: 112 DSPRRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPC 171
R + +Q ++LP V + +C+ICL++Y +G+ LR+LPC
Sbjct: 214 RRNRLRK-DQLKKLP--------------VHKFKKGDEYDVCAICLDEYEDGDKLRILPC 258
Query: 172 RHEFHSSCVDSWLIRWGTFCPVCRHEIRRSTSNEGNE 208
H +H CVD WL + CPVC+ ++ S + +E
Sbjct: 259 SHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSE 295
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 31/210 (14%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPE-----GANVPAFYVTLETGAY 57
R CNF K+ NAQ AGY AAIV+ + LI M + ++P+ ++ +
Sbjct: 99 RLDCNFDIKVLNAQRAGYKAAIVHNVDSDD-LISMGSNDIDTLKKIDIPSVFIGESSANS 157
Query: 58 LKEHARGEAGECCIF------PLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPI 111
LK+ E G I PL Y + +I+ G+ L+ ++ I ++ F + +
Sbjct: 158 LKDEFTYEKGGHIILVPELSLPLEYYL---IPFLIIVGICLILIV-IFMITKFVQDRHRN 213
Query: 112 DSPRRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPC 171
R + +Q ++LP V + +C+ICLE+Y +G+ LR+LPC
Sbjct: 214 RRNRLRK-DQLKKLP--------------VHKFKKGDEYDVCAICLEEYEDGDKLRILPC 258
Query: 172 RHEFHSSCVDSWLIRWGTFCPVCRHEIRRS 201
H +H CVD WL + CPVC+ ++ S
Sbjct: 259 SHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 31/210 (14%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPE-----GANVPAFYVTLETGAY 57
R CNF K+ NAQ AGY AAIV+ + LI M + ++P+ ++ +
Sbjct: 99 RLDCNFDIKVLNAQRAGYKAAIVHNVDSDD-LISMGSNDIDILKKIDIPSVFIGESSANS 157
Query: 58 LKEHARGEAGECCIF------PLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPI 111
LK+ E G I PL Y + +I+ G+ L+ ++ I ++ F + +
Sbjct: 158 LKDEFTYEKGGHVILVPELSLPLEYYL---IPFLIIVGICLILIV-IFMITKFVQDRHRN 213
Query: 112 DSPRRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPC 171
R + +Q ++LP V + +C+ICLE+Y +G+ LR+LPC
Sbjct: 214 RRNRLRK-DQLKKLP--------------VHKFKKGDEYDVCAICLEEYEDGDKLRILPC 258
Query: 172 RHEFHSSCVDSWLIRWGTFCPVCRHEIRRS 201
H +H CVD WL + CPVC+ ++ S
Sbjct: 259 SHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 31/207 (14%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPE-----GANVPAFYVTLETGAY 57
R CNF K+ NAQ AGY AAIV+ + LI M + ++P+ ++ +
Sbjct: 99 RLDCNFDIKVLNAQRAGYKAAIVHNVDSDD-LISMGSNDIEVLKKIDIPSVFIGESSANS 157
Query: 58 LKEHARGEAGECCIF------PLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPI 111
LK+ E G I PL Y + +I+ G+ L+ ++ I ++ F + +
Sbjct: 158 LKDEFTYEKGGHLILVPEFSLPLEYYL---IPFLIIVGICLILIV-IFMITKFVQDRHRA 213
Query: 112 DSPRRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPC 171
R + +Q ++LP V + +C+ICL++Y +G+ LR+LPC
Sbjct: 214 RRNRLRK-DQLKKLP--------------VHKFKKGDEYDVCAICLDEYEDGDKLRILPC 258
Query: 172 RHEFHSSCVDSWLIRWGTFCPVCRHEI 198
H +H CVD WL + CPVC+ ++
Sbjct: 259 SHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 31/207 (14%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPE-----GANVPAFYVTLETGAY 57
R CNF K+ NAQ AGY AAIV+ + LI M + ++P+ ++ +
Sbjct: 99 RLDCNFDIKVLNAQRAGYKAAIVHNVDSDD-LISMGSNDIEVLKKIDIPSVFIGESSANS 157
Query: 58 LKEHARGEAGECCIF------PLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPI 111
LK+ E G I PL Y + +I+ G+ L+ ++ I ++ F + +
Sbjct: 158 LKDEFTYEKGGHLILVPEFSLPLEYYL---IPFLIIVGICLILIV-IFMITKFVQDRHRA 213
Query: 112 DSPRRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPC 171
R + +Q ++LP V + +C+ICL++Y +G+ LR+LPC
Sbjct: 214 RRNRLRK-DQLKKLP--------------VHKFKKGDEYDVCAICLDEYEDGDKLRILPC 258
Query: 172 RHEFHSSCVDSWLIRWGTFCPVCRHEI 198
H +H CVD WL + CPVC+ ++
Sbjct: 259 SHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 31/207 (14%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPE-----GANVPAFYVTLETGAY 57
R CNF K+ NAQ AGY AAIV+ + LI M + ++P+ ++ +
Sbjct: 99 RLDCNFDEKVLNAQRAGYKAAIVHNVDSDD-LISMGSNDIEVLKKIDIPSVFIGESSANS 157
Query: 58 LKEHARGEAGECCIF------PLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPI 111
LK+ E G I PL Y + +I+ G+ L+ ++ I ++ F + +
Sbjct: 158 LKDEFTYEKGGHIILVPEFSLPLEYYL---IPFLIIVGICLILIV-IFMITKFVQDRHRA 213
Query: 112 DSPRRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPC 171
R + +Q ++LP V + +C+ICL++Y +G+ LR+LPC
Sbjct: 214 RRNRLRK-DQLKKLP--------------VHKFKKGDEYDVCAICLDEYEDGDKLRILPC 258
Query: 172 RHEFHSSCVDSWLIRWGTFCPVCRHEI 198
H +H CVD WL + CPVC+ ++
Sbjct: 259 SHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPEGAN----VPAFYVTLETGAYL 58
R CNF K+ NAQ AGY AA+V+ + L + E +P+ ++ + YL
Sbjct: 89 RFDCNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWNSEEIQQQIWIPSVFIGERSSEYL 148
Query: 59 KEHARGEAGECCI------FPLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPID 112
+ E G + FPL Y I G++ L V+++ + AR +
Sbjct: 149 RALFVYEKGARVLLVPDNTFPLGYYL------IPFTGIVGLLVLAMGAVM-IARCI---- 197
Query: 113 SPRRHRPE-QTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPC 171
+HR Q +L + + +P+ + + +C+ICL++Y +G+ LRVLPC
Sbjct: 198 ---QHRKRLQRNRLTKEQLKQIPTHDYQK------GDQYDVCAICLDEYEDGDKLRVLPC 248
Query: 172 RHEFHSSCVDSWLIRWGTFCPVCRHEIRRSTSN 204
H +HS CVD WL + CP+C+ + R +
Sbjct: 249 AHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGD 281
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 31/210 (14%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPEGAN----VPAFYVTLETGAYL 58
R CNF K+ NAQ AGY AA+V+ + L + E +P+ ++ + YL
Sbjct: 89 RFDCNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWNSEEIQQQIWIPSVFIGERSAEYL 148
Query: 59 KEHARGEAGECCI------FPLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPID 112
+ E G + FPL Y L+ F + LL + +
Sbjct: 149 RALFVYEKGARVLLVPDNSFPLGY-------------YLIPFTGIVGLLVLAMGTVLIVR 195
Query: 113 SPRRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRE-TLCSICLEDYREGENLRVLPC 171
+ + Q +L + + +P+ + G E +C+ICL++Y +G+ LR+LPC
Sbjct: 196 CIQHRKRLQRNRLTKEQLKQIPTHDYQK-------GDEYDVCAICLDEYEDGDKLRILPC 248
Query: 172 RHEFHSSCVDSWLIRWGTFCPVCRHEIRRS 201
H +HS CVD WL + CP+C+ + R
Sbjct: 249 AHAYHSRCVDPWLTQTRKTCPICKQPVHRG 278
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 84.3 bits (207), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 31/210 (14%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPEGAN----VPAFYVTLETGAYL 58
R CNF K+ NAQ AGY AA+V+ + L + E +P+ ++ + YL
Sbjct: 89 RFDCNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWNSEEIQQQIWIPSVFIGERSAEYL 148
Query: 59 KEHARGEAGECCI------FPLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPID 112
+ E G + FPL Y L+ F + LL + +
Sbjct: 149 RALFVYEKGARVLLVPDNSFPLGY-------------YLIPFTGIVGLLVLAMGTVLIVR 195
Query: 113 SPRRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRE-TLCSICLEDYREGENLRVLPC 171
+ + Q +L + + +P+ + G E +C+ICL++Y +G+ LRVLPC
Sbjct: 196 CIQHRKRLQRNRLTKEQLKQIPTHDYQK-------GDEYDVCAICLDEYEDGDKLRVLPC 248
Query: 172 RHEFHSSCVDSWLIRWGTFCPVCRHEIRRS 201
H +HS CVD WL + CP+C+ + R
Sbjct: 249 AHAYHSRCVDPWLTQTRKTCPICKQPVHRG 278
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPEGANVPAFYVTLETG----AYL 58
RG C F KI A A ++Y + K + MT+P ++ A +T G +YL
Sbjct: 110 RGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILSYL 169
Query: 59 KEHARGE---AGECCIFPLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPIDSPR 115
+++ + A + P +++ V I + ++L+ + S L+F+F +K+ ++
Sbjct: 170 EKNISVQMTIAVGTRMPPKNFSRGSLVFVSISF-IVLMIISSAWLIFYFIQKIRYTNARD 228
Query: 116 RHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETL-----CSICLEDYREGENLRVLP 170
R++ R+L + A+ + +V+ +ET C++C+E Y++ + +RVLP
Sbjct: 229 RNQ----RRLGDAAKKAISKL---TTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP 281
Query: 171 CRHEFHSSCVDSWLIRWGTFCPVCRHEIRRS 201
C+H FH SCVD WL T CP+C+ I ++
Sbjct: 282 CKHVFHKSCVDPWLSEHCT-CPMCKLNILKA 311
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPEGANVPAFYVTLETG----AYL 58
RG C F KI A A ++Y + K + MT+P ++ A +T G +YL
Sbjct: 110 RGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILSYL 169
Query: 59 KEHARGE---AGECCIFPLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPIDSPR 115
+++ + A + P +++ V I + ++L+ + S L+F+F +K+ ++
Sbjct: 170 EKNISVQMTIAVGTRMPPKNFSRGSLVFVSISF-IVLMIISSAWLIFYFIQKIRYTNARD 228
Query: 116 RHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETL-----CSICLEDYREGENLRVLP 170
R++ R+L + A+ + +V+ +ET C++C+E Y++ + +RVLP
Sbjct: 229 RNQ----RRLGDAAKKAISKL---TTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLP 281
Query: 171 CRHEFHSSCVDSWLIRWGTFCPVCRHEIRRS 201
C+H FH SCVD WL T CP+C+ I ++
Sbjct: 282 CKHVFHKSCVDPWLSEHCT-CPMCKLNILKA 311
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPEGANVPAFYVTLETG----AYL 58
RG C F KI A A ++Y + K + MT+P ++ A +T G +YL
Sbjct: 110 RGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILSYL 169
Query: 59 KEHARGE---AGECCIFPLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPIDSPR 115
+++ + A + P +++ V I + ++L+ + S L+F+F +K+ ++
Sbjct: 170 EKNISVQMTIAVGTRMPPKNFSRGSLVFVSISF-IVLMIISSAWLIFYFIQKIRYTNARD 228
Query: 116 RHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETL-----CSICLEDYREGENLRVLP 170
R++ R+L + A+ + +V+ +ET C++C+E Y++ + +R+LP
Sbjct: 229 RNQ----RRLGDAAKKAISKL---TTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP 281
Query: 171 CRHEFHSSCVDSWLIRWGTFCPVCRHEIRRS 201
C+H FH SCVD WL T CP+C+ I ++
Sbjct: 282 CKHVFHKSCVDPWLSEHCT-CPMCKLNILKA 311
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 120 EQTRQLPRSTVNALPSFVFSSVTSVRCHGRETL-CSICLEDYREGENLRVLP-CRHEFHS 177
+Q R L S + P+F +S+V ++R G+E L CS+CL ++ + E LR++P C H FH
Sbjct: 111 QQARGLDASIIETFPTFQYSTVKTLRI-GKEALECSVCLNEFEDDETLRLIPKCCHVFHP 169
Query: 178 SCVDSWLIRWGTFCPVCRHEI 198
C+D+WL R T CP+CR ++
Sbjct: 170 GCIDAWL-RSHTTCPLCRADL 189
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 148 GRETLCSICLEDYREGENLRVLPCRHEFHSSCVDSWLIRWGTFCPVCRHEIRRSTSNEG 206
G + C+ICLE Y +GE LRV+PC H FH CVD WL++ T CP CRH I N G
Sbjct: 285 GSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHT-CPHCRHNIIEQKGNPG 342
>sp|Q4R6Y5|ZNRF4_MACFA Zinc/RING finger protein 4 OS=Macaca fascicularis GN=ZNRF4 PE=2
SV=1
Length = 429
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 23/206 (11%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPE-----GANVPAFYVTLETGAY 57
R C F K+ NAQ AG++AAIV+ + L+ MT+ +P+ +V
Sbjct: 163 RYDCTFDLKVLNAQRAGFEAAIVHNVHSDD-LVSMTHVSEDLRGQIAIPSVFVGEAASQD 221
Query: 58 LKEHARGEAGECCIF----PLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPIDS 113
L+ + + P + H + W + + + LF R +
Sbjct: 222 LRVILGCDKSAHVLLLPDDPPCRDLDCHPVLTVSWALGRTLALVVSTLFVLNRLWLWAQA 281
Query: 114 PRRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPCRH 173
HR R + ST F+ R LC+ICL++Y EG+ L++LPC H
Sbjct: 282 CCSHR----RLVKTSTCQKAQVRTFTR--------RNDLCAICLDEYEEGDQLKILPCSH 329
Query: 174 EFHSSCVDSWLIRWG-TFCPVCRHEI 198
+H C+D W + CPVC+ +
Sbjct: 330 TYHCKCIDPWFSQAPRRSCPVCKQSV 355
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 122 TRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVL-PCRHEFHSSCV 180
+R L + +N+ PSF++S V ++ C+ICL ++ + E LR++ PC H FH+SC+
Sbjct: 97 SRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCI 156
Query: 181 DSWLIRWGTFCPVCRHEIRRSTSNEGN 207
D WL T CPVCR + ++ N
Sbjct: 157 DVWLSSRST-CPVCRASLPPKPGSDQN 182
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 123 RQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLP-CRHEFHSSCVD 181
R L + + + P+F++S V ++ C+ICL ++ + E LR +P C H FH++C+D
Sbjct: 93 RGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCID 152
Query: 182 SWLIRWGTFCPVCRHEI 198
WL W T CPVCR +
Sbjct: 153 VWLSSWST-CPVCRANL 168
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPEG--ANVPAFYVTLETGAYLKE 60
RG C + KI++A A +++ + +P +T P ++V A + G L
Sbjct: 111 RGNCTYKDKIRHAVGHNASAVVIFNVGSSNPNETITMPHQGISDVVAIMIPEPKGRELVL 170
Query: 61 -HARGEAGECCIFPLSYAWNKHVEKIIV----WGMLLLFVISIP-LLFWFARKLYPIDSP 114
R I + K+V + V ++L +IS+ L+F++ ++ ++
Sbjct: 171 LMERNITVHMHITIGTRNLQKYVSRTSVVFVSISFIILMIISLAWLVFYYIQRFRYANAR 230
Query: 115 RRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETL-----CSICLEDYREGENLRVL 169
R++ R+L + A+ V ++R +ET C++C+E Y+ + +R+L
Sbjct: 231 DRNQ----RRLGDAAKKAISQL---QVRTIRKGDQETESDFDNCAVCIEGYKPNDVVRIL 283
Query: 170 PCRHEFHSSCVDSWLIRWGTFCPVCRHEIRRS 201
PCRH FH CVD WL+ T CP+C+ I ++
Sbjct: 284 PCRHLFHKCCVDPWLVDHRT-CPMCKMNILKA 314
>sp|Q8LBA0|NIPL2_ARATH NEP1-interacting protein-like 2 OS=Arabidopsis thaliana GN=ATL24
PE=1 SV=2
Length = 223
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 121 QTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLP-CRHEFHSSC 179
+ R L ++ LP ++ SS R + T C+ICL+D + GE R LP C H FH C
Sbjct: 147 EARGLSGDSLRKLPCYIMSSEMVRR---QVTHCTICLQDIKTGEITRSLPKCDHTFHLVC 203
Query: 180 VDSWLIRWGTFCPVCRHEIR 199
VD WLIR G+ CP+CR ++
Sbjct: 204 VDKWLIRHGS-CPICRQAVK 222
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 122 TRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLP-CRHEFHSSCV 180
++ L V+ +P + ++ G + CS+CL+D++ GE +R LP C H FH C+
Sbjct: 160 SKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCI 219
Query: 181 DSWLIRWGTFCPVCRHEI 198
D+WL R G+ CP+CR ++
Sbjct: 220 DNWLFRHGS-CPMCRRDL 236
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 121 QTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPCRHEFHSSCV 180
+ R L ++ + LPS+ F+ + +TLC +C D+ + LRVLPC HEFH+ CV
Sbjct: 351 KPRGLTKADIEQLPSYRFNPDSH---QSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCV 407
Query: 181 DSWLIRWGTFCPVCRHE 197
D WL + CP+CR +
Sbjct: 408 DKWL-KANRTCPICRAD 423
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 125 LPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLP-CRHEFHSSCVDSW 183
L + V + P F +SSV + ++ C+ICL + + E +R+LP C H FH C+D+W
Sbjct: 96 LDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTW 155
Query: 184 LIRWGTFCPVCRHEIRRSTSNEGNEQVHV 212
L T CPVCR + ++ G+E V
Sbjct: 156 LYSHAT-CPVCRSNLTAKSNKPGDEDDGV 183
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 153 CSICLEDYREGENLRVLPCRHEFHSSCVDSWLIRWGTFCPVCRHEIRRSTSN 204
C+ICLE Y +GE LRV+PC H FH CVD WL++ T CP CRH I N
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHT-CPHCRHNIIEQKGN 343
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 8/60 (13%)
Query: 146 CHGRETL-------CSICLEDYREGENLRVLPCRHEFHSSCVDSWLIRWGTFCPVCRHEI 198
C G +TL C+ICLE Y +GE LRV+PC H FH CVD WL++ T CP CRH I
Sbjct: 188 CGGLDTLSSSSISDCAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHT-CPHCRHNI 246
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 121 QTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPCRHEFHSSCV 180
+ R L ++ + LPS+ F+ + +TLC +C D+ + LRVLPC HEFH+ CV
Sbjct: 269 KPRGLTKADIEQLPSYRFNPDSH---QSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCV 325
Query: 181 DSWLIRWGTFCPVCR 195
D WL + CP+CR
Sbjct: 326 DKWL-KANRTCPICR 339
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 153 CSICLEDYREGENLRVLPCRHEFHSSCVDSWLIRWGTFCPVCRHEI 198
C+ICLE Y +GE LRV+PC H FH CVD WL++ T CP CRH I
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHT-CPHCRHNI 311
>sp|Q9LT17|BBR_ARATH E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana
GN=BBR PE=2 SV=1
Length = 340
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 121 QTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPCRHEFHSSCV 180
++R L T+ +LPS + + +G C IC DY + E+L +LPC+H +HS C+
Sbjct: 258 ESRGLSADTIASLPSKRYKEGDNQ--NGTNESCVICRLDYEDDEDLILLPCKHSYHSECI 315
Query: 181 DSWLIRWGTFCPVCRHEIRRSTSNE 205
++WL + CPVC E+ STS +
Sbjct: 316 NNWL-KINKVCPVCSAEVSTSTSGQ 339
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKK-SPLIYMTYPEGANVPAFYVTLETGAYLKEH 61
RG C F K+ NA G A ++Y K + + M++ N V+ G + E
Sbjct: 110 RGGCTFKEKVFNAANRGASAVVIYNEAKSGNATVSMSHLGTGNTVVIMVSYPKGMEIMEP 169
Query: 62 ARGEAGECCIFPLSYAWNKHVEKII--------VWGMLLLFVISIP--LLFWFARKLYP- 110
R + + + +HV++ I + + +IS+ + ++ R LY
Sbjct: 170 LRRDIPVKMVITVG---TRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTG 226
Query: 111 ----IDSPRRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENL 166
S R+ + QL V + + C++C+E+Y+ + +
Sbjct: 227 AQCGNQSNRKETKKAISQLQLHRVKKGEKGIDIDAEN---------CAVCIENYKTKDLV 277
Query: 167 RVLPCRHEFHSSCVDSWLIRWGTFCPVCRHEIRRS 201
R+LPC+H FH C+D WLI T CP+C+ ++ ++
Sbjct: 278 RILPCKHIFHRLCIDPWLIEHRT-CPMCKLDVIKA 311
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYAL-RKKSPLIYMTYPEGANVPAFYVTLETGAYLKEH 61
+G C + KI+NA A +++ + + I M + ++ A + G +
Sbjct: 122 KGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHAGVEDIVAIMIPEPKGKEIVSL 181
Query: 62 -ARGEAGECCIFPLSYAWNKHVEKIIV----WGMLLLFVISIP-LLFWFARKLYPIDSPR 115
R I + K+V + V ++L +IS+ L+F++ ++ ++
Sbjct: 182 LERNITVTMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARD 241
Query: 116 RHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETL-----CSICLEDYREGENLRVLP 170
R++ R+L + A+ V ++R +ET C++C+E Y+ + +R+LP
Sbjct: 242 RNQ----RRLGDAAKKAISKL---QVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILP 294
Query: 171 CRHEFHSSCVDSWLIRWGTFCPVCRHEIRRS 201
CRH FH SCVD WL+ T CP+C+ I ++
Sbjct: 295 CRHLFHKSCVDPWLLDHRT-CPMCKMNILKA 324
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 121 QTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPCRHEFHSSCV 180
+ R L ++ + LPS+ F+ +TLC +C D+ + LRVLPC HEFH+ CV
Sbjct: 367 KPRGLTKADIEQLPSYRFNLENH---QSEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCV 423
Query: 181 DSWLIRWGTFCPVCR 195
D WL + CP+CR
Sbjct: 424 DKWL-KTNRTCPICR 437
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 121 QTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPCRHEFHSSCV 180
+ R L ++ + LPS+ F+ +TLC +C+ D+ + LRVLPC HEFH+ CV
Sbjct: 437 KPRGLTKADIEQLPSYRFNPSNH---QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCV 493
Query: 181 DSWLIRWGTFCPVCR 195
D WL + CP+CR
Sbjct: 494 DKWL-KGNRTCPICR 507
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 121 QTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPCRHEFHSSCV 180
+ R L ++ + LPS+ F+ + +TLC +C D+ + LRVLPC HEFH+ CV
Sbjct: 326 KPRGLTKADIEQLPSYRFNPDSH---QSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCV 382
Query: 181 DSWLIRWGTFCPVCR 195
D WL + CP+CR
Sbjct: 383 DKWL-KANRTCPICR 396
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 121 QTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPCRHEFHSSCV 180
+ R L ++ + LPS+ F+ +TLC +C+ D+ + LRVLPC HEFH+ CV
Sbjct: 434 KPRGLTKADIEQLPSYRFNPNNH---QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCV 490
Query: 181 DSWLIRWGTFCPVCR 195
D WL + CP+CR
Sbjct: 491 DKWL-KANRTCPICR 504
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYP-EGANVPA----------FYVT 51
RG+C F K+++ I+Y ++ L M + N+ A +T
Sbjct: 147 RGRCTFEEKVKHVYQQNAAGVIIYNDKQVMQLEKMQIKGKTRNIAAVITYQNIGQDLSLT 206
Query: 52 LETGAYLK-EHARGEAGECCIFPLSYAWNKHVEKIIVWGMLLLFVISIP-LLFWFARKLY 109
L+ G + G G I L N+ + ++L +IS+ L+F++ ++
Sbjct: 207 LDKGYNVTISIIEGRRGVRTISSL----NRTSVLFVSISFIVLMIISLVWLIFYYIQRFR 262
Query: 110 PIDSPRRHRPEQTRQLPRSTVNALPSF-VFSSVTSVRCHGRETLCSICLEDYREGENLRV 168
+ + + +Q+R L T A+ + S C+IC+E Y+ + +R+
Sbjct: 263 YMQA----KDQQSRNLCSVTKKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRI 318
Query: 169 LPCRHEFHSSCVDSWLIRWGTFCPVCRHEI 198
LPC+HEFH +C+D WLI T CP+C+ ++
Sbjct: 319 LPCKHEFHKNCIDPWLIEHRT-CPMCKLDV 347
>sp|Q08D68|ZNRF3_XENTR E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis GN=znrf3
PE=2 SV=1
Length = 853
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 153 CSICLEDYREGENLRVLPCRHEFHSSCVDSWLIRWGTFCPVCRHEI 198
C+ICLE Y +GE LRV+PC H FH CVD WL++ T CP CRH I
Sbjct: 266 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHT-CPHCRHNI 310
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 15/124 (12%)
Query: 83 EKIIVWGMLLLFVISIPLLF------WFARKLYPIDSPRRHR---PEQTRQLPRSTVNAL 133
+ +++ LL +I + L W R DSP ++ + + LPRST A
Sbjct: 27 DMVVILSALLCALICVAGLAAVVRCAWLRRFTAGGDSPSPNKGLKKKALQSLPRSTFTAA 86
Query: 134 PSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLP-CRHEFHSSCVDSWLIRWGTFCP 192
S ++ G T C+ICL D+ +GE +RVLP C H FH C+D WL+ + CP
Sbjct: 87 ESTSGAAAE----EGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSS-CP 141
Query: 193 VCRH 196
CR
Sbjct: 142 SCRR 145
>sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2
SV=1
Length = 212
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 10/81 (12%)
Query: 125 LPRSTVNALPSFVFS-SVTSV-------RCHGRETLCSICLEDYREGENLRVLP-CRHEF 175
L S +N+ P F F+ +T+V GRET CSICL +Y E E LR++P C+H F
Sbjct: 100 LDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHYF 159
Query: 176 HSSCVDSWLIRWGTFCPVCRH 196
H C+D+WL G+ CPVCR+
Sbjct: 160 HVYCLDAWLKLNGS-CPVCRN 179
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 123 RQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLP-CRHEFHSSCVD 181
R L S V P+F++S V + + E C+ICL ++ + E LR+LP C H FH C+D
Sbjct: 98 RGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCID 157
Query: 182 SWLIRWGTFCPVCRHEI 198
+WL T CPVCR +
Sbjct: 158 AWLEAHVT-CPVCRANL 173
>sp|Q8WWF5|ZNRF4_HUMAN Zinc/RING finger protein 4 OS=Homo sapiens GN=ZNRF4 PE=2 SV=3
Length = 429
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYP-----EGANVPAFYVTLETGAY 57
R C F K+ NAQ AG++AAIV+ + L+ MT+ +P+ +V+
Sbjct: 163 RYDCTFDLKVLNAQRAGFEAAIVHNVHSDD-LVSMTHVYEDLRGQIAIPSVFVSEAASQD 221
Query: 58 LKE----HARGEAGECCIFPLSYAWNKHVEKIIVWGMLLLFVISIPLLFWFARK-LYPID 112
L+ + A P + H + W + + + F L+
Sbjct: 222 LRVILGCNKSAHALLLPDDPPCHDLGCHPVLTVSWVLGCTLALVVSAFFVLNHLWLWAQA 281
Query: 113 SPRRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPCR 172
RP +T ++ V +F + LC+ICL++Y EG+ L++LPC
Sbjct: 282 CCSHRRPVKTSTCQKAQVR---TFTW----------HNDLCAICLDEYEEGDQLKILPCS 328
Query: 173 HEFHSSCVDSWLIRWG-TFCPVCRHEI 198
H +H C+D W + CPVC+ +
Sbjct: 329 HTYHCKCIDPWFSQAPRRSCPVCKQSV 355
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 122 TRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLP-CRHEFHSSCV 180
++ L V +P + + CS+CL+D++ GE +R LP C H FH C+
Sbjct: 165 SKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCI 224
Query: 181 DSWLIRWGTFCPVCRHEI 198
D+WL+R G+ CP+CR +I
Sbjct: 225 DNWLLRHGS-CPMCRRDI 241
>sp|O82353|ATL67_ARATH RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2
SV=1
Length = 214
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Query: 125 LPRSTVNALPSFVFSSVTSVRCHGR-----ETLCSICLEDYREGENLRVLP-CRHEFHSS 178
L ++ +N+ P F FS TS +T CSICL +Y+E E LR++P C+H FH
Sbjct: 105 LDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHYFHLC 164
Query: 179 CVDSWLIRWGTFCPVCRH 196
C+D+WL G+ CPVCR+
Sbjct: 165 CLDAWLKLNGS-CPVCRN 181
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYAL-RKKSPLIYMTYPEGANVPAFYVTLETGAYLKEH 61
+G C + KI+NA A +++ + + I M + ++ A + G +
Sbjct: 123 KGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHAGVEDIVAIMIPEPKGKEIVSL 182
Query: 62 -ARGEAGECCIFPLSYAWNKHVEKIIV----WGMLLLFVISIP-LLFWFARKLYPIDSPR 115
R I + K+V + V ++L +IS+ L+F++ ++ ++
Sbjct: 183 LERNITVTMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARD 242
Query: 116 RHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETL-----CSICLEDYREGENLRVLP 170
R++ R+L + A+ + +++ +ET C++C+E Y+ + +R+LP
Sbjct: 243 RNQ----RRLGDAAKKAISKL---QIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILP 295
Query: 171 CRHEFHSSCVDSWLIRWGTFCPVCRHEIRRS 201
CRH FH SCVD WL+ T CP+C+ I ++
Sbjct: 296 CRHLFHKSCVDPWLLDHRT-CPMCKMNILKA 325
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Query: 4 GQCNFSYKIQNAQAAGYDAAIVYALRKKSPLIYMTYPEGANVPAFYVTLETGAYLKEHAR 63
G C F+ KI A G A +VY + + M++P + A + G + + +
Sbjct: 108 GGCTFTEKINRAAERGARAVVVYNNGIDNEVFEMSHPGTKDTVAIMIGNLKGNEIVDLIK 167
Query: 64 GEAGECCIFPLSY---AWNKHVEKIIVWGMLLLFVISIPLLFWFARKLYPIDSPRRHRPE 120
G + + +W H I + + F+++ + +F Y R R +
Sbjct: 168 GGMQVTMVIEVGRKHGSWINHYS--IFFVSVSFFIVTAATVGYFI--FYSARRWRLTRAQ 223
Query: 121 QTRQ--LPRSTVNALPSFVFSSVTSVRCHGRETL------CSICLEDYREGENLRVLPCR 172
+Q L A+ ++ G + L C++C+E Y+ + +R+L C
Sbjct: 224 NKKQKRLKAEAKKAIGKLQLRTIK----QGDKVLGPDGDSCAVCIEPYKPSDVVRILTCN 279
Query: 173 HEFHSSCVDSWLIRWGTFCPVCRHEIRRS 201
H FH +C+D WL+ T CP+C+ +I +S
Sbjct: 280 HFFHKNCIDPWLLEHRT-CPMCKCDILKS 307
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 113 SPRRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVL-PC 171
SPRR R L + + PSFV++ + E C +CL ++++ E LR++ PC
Sbjct: 49 SPRR----PPRGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPC 104
Query: 172 RHEFHSSCVDSWLIRWGTFCPVCRHEI 198
H FH+ CVD WL T CP+CR ++
Sbjct: 105 VHVFHADCVDIWLSHSST-CPICRAKV 130
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 125 LPRSTVNALPSFVFSSVTSVRCHGRETL-CSICLEDYREGENLRVLP-CRHEFHSSCVDS 182
L S + P+F +S+V ++R G+E L C +CL ++ + E LR++P C H FH C+D+
Sbjct: 90 LDASVIETFPTFPYSTVKTLRI-GKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDA 148
Query: 183 WLIRWGTFCPVCRHEI 198
WL R T CP+CR +
Sbjct: 149 WL-RSQTTCPLCRANL 163
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 23/134 (17%)
Query: 89 GMLLLFVISIPLLFWFARK---LYPI------------DSPRRHRP--EQTRQLPRSTVN 131
++++F+ + L+F F RK L+PI SP+ L ++ ++
Sbjct: 128 ALIIVFLGVLYLIFKFLRKSSTLFPIPHFNYNPDLFSFSSPQLQHLFFLHDSGLDQTAID 187
Query: 132 ALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLP-CRHEFHSSCVDSWLIRWGTF 190
ALP F++ +VT + C++CL ++ + + LR+LP C H FH C+D+WL+ T
Sbjct: 188 ALPVFLYGNVTISLEQPFD--CAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNST- 244
Query: 191 CPVCRHEIRRSTSN 204
CP+CR + STSN
Sbjct: 245 CPLCRRSL--STSN 256
>sp|P87139|YDM9_SCHPO Uncharacterized RING finger protein C57A7.09 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC57A7.09 PE=1 SV=1
Length = 372
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 85/224 (37%), Gaps = 34/224 (15%)
Query: 3 RGQCNFSYKIQNAQAAGYDAAIVYALRKKSP--LIYMTYPEGAN-----VPAFYVTLETG 55
RG+C + K AQ G+ IV R S L YM P+ + +P+ +V+ +
Sbjct: 149 RGKCTYFDKALEAQRLGFKGVIVGDNRSPSSFRLHYMVAPDKVDESKVHIPSLFVSTSSY 208
Query: 56 AYLKEHARGEAGECCIFPLSYAWNKHVEKIIVWGMLLLFVISIPLLFW--------FARK 107
L + PL + W LL F SI +L F R
Sbjct: 209 NLLWSDLLHSYRQ----PLKLYAKPEELGDMFWPFLLCFSPSIIMLITVQALAIRKFIRT 264
Query: 108 LYPIDSPRR---HRPEQT----------RQLPRSTVNALPSFVFSSVTSVRCHGRETLCS 154
RR P +T ++ ST N + T G E C
Sbjct: 265 YRTKSKTRRFIEDLPSRTISREGFYSEEEEIENSTQNGELVPLMDESTRRATFGVE--CV 322
Query: 155 ICLEDYREGENLRVLPCRHEFHSSCVDSWLIRWGTFCPVCRHEI 198
ICLE + +G+ + LPC+HEFH C+ W++ + CP C E+
Sbjct: 323 ICLESFTKGDKVVALPCKHEFHRPCIAKWIVDYRHACPTCNTEV 366
>sp|Q5RF74|RN128_PONAB E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2
SV=1
Length = 428
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 23/215 (10%)
Query: 4 GQCNFSYKIQNAQAAGYDAAIVYAL-RKKSPLIYMTYPEGANVPAFYV-TLETGAYLKEH 61
G C F+ KI A G A+++ ++ +I M++P ++ A + L+ L+
Sbjct: 124 GGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAGDIVAIMIGNLKGTKILQSI 183
Query: 62 ARGEAGECCI--FPLSYAWNKHVEKIIVWGMLLLFVISIP----LLFWFARKLYPIDSPR 115
RG I W H V + F+I+ +F+ AR+L
Sbjct: 184 QRGIQVTMVIEVGKKHGPWVNHYSIFFV--SVSFFIITAATVGYFIFYSARRL------- 234
Query: 116 RHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRE-----TLCSICLEDYREGENLRVLP 170
R+ Q+R+ + +A + + +++ RE C++C+E Y+ + +R+L
Sbjct: 235 RNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDREIGPDGDSCAVCIELYKPNDLVRILT 294
Query: 171 CRHEFHSSCVDSWLIRWGTFCPVCRHEIRRSTSNE 205
C H FH +CVD WL+ T CP+C+ +I ++ E
Sbjct: 295 CNHIFHKTCVDPWLLEHRT-CPMCKCDILKALGIE 328
>sp|Q9D304|RN128_MOUSE E3 ubiquitin-protein ligase RNF128 OS=Mus musculus GN=Rnf128 PE=1
SV=1
Length = 428
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 25/216 (11%)
Query: 4 GQCNFSYKIQNAQAAGYDAAIVYAL-RKKSPLIYMTYPEGANVPAFYV-TLETGAYLKEH 61
G C F+ KI A G A+++ ++ +I M++P ++ A + L+ L+
Sbjct: 124 GGCTFADKIHLASERGASGAVIFNFPGTRNEVIPMSHPGAGDIVAIMIGNLKGTKILQSI 183
Query: 62 ARGEAGECCI--FPLSYAWNKHVEKIIVWGMLLLFVISIP----LLFWFARKLYPIDSPR 115
RG I W H V + F+I+ +F+ AR+L
Sbjct: 184 QRGIQVTMVIEVGKKHGPWVNHYSIFFV--SVSFFIITAATVGYFIFYSARRLRNA---- 237
Query: 116 RHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETL------CSICLEDYREGENLRVL 169
R + + RQL A+ ++ G + + C++C+E Y+ + +R+L
Sbjct: 238 RAQSRKQRQLKADAKKAIGKLQLRTLK----QGDKEIGPDGDSCAVCIELYKPNDLVRIL 293
Query: 170 PCRHEFHSSCVDSWLIRWGTFCPVCRHEIRRSTSNE 205
C H FH +CVD WL+ T CP+C+ +I ++ E
Sbjct: 294 TCNHIFHKTCVDPWLLEHRT-CPMCKCDILKALGIE 328
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 128 STVNALPSFVFSSVTSVRCHGRETLCSICLEDYREGENLRVLPCRHEFHSSCVDSWLIRW 187
ST ++ + S+ S + E CS+CLE GE +R LPC H+FH+ C+D WL +
Sbjct: 186 STSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQ 245
Query: 188 GTFCPVCR 195
GT CPVC+
Sbjct: 246 GT-CPVCK 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,830,324
Number of Sequences: 539616
Number of extensions: 3321682
Number of successful extensions: 9516
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 311
Number of HSP's that attempted gapping in prelim test: 9094
Number of HSP's gapped (non-prelim): 550
length of query: 214
length of database: 191,569,459
effective HSP length: 113
effective length of query: 101
effective length of database: 130,592,851
effective search space: 13189877951
effective search space used: 13189877951
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)