BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028081
(214 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P69834|ISPD_ARATH 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase,
chloroplastic OS=Arabidopsis thaliana GN=ISPD PE=1 SV=1
Length = 302
Score = 353 bits (907), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/208 (81%), Positives = 191/208 (91%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
M +MPKQY+PLLGQPIALYSF+TFSRM EVKEIVVVCDP + DIFEE +E I+VDL+F+
Sbjct: 92 MKMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESIDVDLRFA 151
Query: 61 LPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKA 120
+PGKERQDSVYSGLQE+D NSELVCIHDSARPLV ++DV+KVL D VGAAVLGVPAKA
Sbjct: 152 IPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKA 211
Query: 121 TIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKH 180
TIKE NS+S VV+TLDRKTLWEMQTPQVIKP+LLKKGFELV EGLEVTDDVSIVE+LKH
Sbjct: 212 TIKEVNSDSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTDDVSIVEYLKH 271
Query: 181 PVYITEGSYTNIKVTTPDDLLIAERILN 208
PVY+++GSYTNIKVTTPDDLL+AERIL+
Sbjct: 272 PVYVSQGSYTNIKVTTPDDLLLAERILS 299
>sp|Q5N8G1|ISPD_ORYSJ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase,
chloroplastic OS=Oryza sativa subsp. japonica GN=ISPD
PE=2 SV=1
Length = 297
Score = 319 bits (817), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/208 (75%), Positives = 185/208 (88%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
MGA+MPKQYLPLLG PIAL+S TF ++ EVKE+VVVCDP Y DIFE + E + + +KF+
Sbjct: 88 MGASMPKQYLPLLGLPIALHSLKTFCQLKEVKEVVVVCDPDYKDIFEGSIENVQIPIKFA 147
Query: 61 LPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKA 120
LPGKERQDSVY+GLQE+D +SELVC+HDSARPLV S+DV+KVL DA+ GAAVLGVP KA
Sbjct: 148 LPGKERQDSVYNGLQEIDGDSELVCVHDSARPLVSSEDVKKVLEDAIVHGAAVLGVPVKA 207
Query: 121 TIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKH 180
TIKEA+S SFVV+TLDRKTLWEMQTPQV++P LL+ GFELV R+GLEVTDDVSIVE+LKH
Sbjct: 208 TIKEADSNSFVVKTLDRKTLWEMQTPQVMRPSLLRDGFELVKRDGLEVTDDVSIVEYLKH 267
Query: 181 PVYITEGSYTNIKVTTPDDLLIAERILN 208
VYITEGSYTNIKVTTPDDLL+AER++N
Sbjct: 268 SVYITEGSYTNIKVTTPDDLLLAERLMN 295
>sp|Q6MEE8|ISPD_PARUW 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Protochlamydia amoebophila (strain UWE25) GN=ispD
PE=3 SV=1
Length = 230
Score = 196 bits (497), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 142/211 (67%), Gaps = 7/211 (3%)
Query: 1 MGANM----PKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD 56
MG M PKQYL + +PIAL+SF + M E+++++VVC+P Y +F T K+N
Sbjct: 17 MGTRMKNLIPKQYLTIQEKPIALHSFEKLASMPEIEQMIVVCEPQYEQLF--TVYKLNKP 74
Query: 57 LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGV 116
L F+ PG RQDS+++G++ + N LVCIHDSARP + +++ + +A + GAAVLGV
Sbjct: 75 LIFARPGLRRQDSLWNGIKLIAGNP-LVCIHDSARPFIEIDRIRQTVAEAEKWGAAVLGV 133
Query: 117 PAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVE 176
KATIK + F+V T +R LWEMQTPQ+++ LL GF + + L V+DDVS+VE
Sbjct: 134 RVKATIKICEEKQFIVNTPNRAFLWEMQTPQIVRLKLLYDGFSVAQKNELTVSDDVSLVE 193
Query: 177 HLKHPVYITEGSYTNIKVTTPDDLLIAERIL 207
+ PV + EGSY NIK+TTP+DLLIA+ IL
Sbjct: 194 LIDKPVKVVEGSYLNIKITTPEDLLIAQSIL 224
>sp|Q9Z7X5|ISPD_CHLPN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydia pneumoniae GN=ispD PE=3 SV=1
Length = 211
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 122/207 (58%), Gaps = 12/207 (5%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
G+ +PKQYLPL G P+ L+S S + ++ E++VVCDPSY + F+E + F+
Sbjct: 17 FGSKIPKQYLPLNGTPLVLHSLKILSSLPQIAEVIVVCDPSYQETFQE------YPVSFA 70
Query: 61 LPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKA 120
+PG+ RQDSV+SGLQ+V + V IHD ARP + ++ +L A ++GA L P
Sbjct: 71 IPGERRQDSVFSGLQQVSY--PWVIIHDGARPFIYPDEIHDLLETAEKIGATALASPIPY 128
Query: 121 TIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKH 180
TIK+ N VRTLDR L + TPQ IK ++L++G L + L + DD+ E +
Sbjct: 129 TIKQRNP----VRTLDRDNLAIIHTPQCIKTEILREGLALAKEKQLTLVDDIEAAEIIGK 184
Query: 181 PVYITEGSYTNIKVTTPDDLLIAERIL 207
P + + IK++ P+DL IA+ +L
Sbjct: 185 PSQLVFNKHPQIKISYPEDLTIAQALL 211
>sp|Q5L433|ISPD_GEOKA 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Geobacillus kaustophilus (strain HTA426) GN=ispD PE=3
SV=1
Length = 228
Score = 154 bits (389), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 4/209 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
M A M KQ+L L G+P+ + + F R IV+V +P+ FE+ + + +
Sbjct: 16 MNAGMNKQFLELGGEPLIVRTLNVFERDERCTRIVLVVNPAERSRFEQLLARFRIQKVAA 75
Query: 61 LP--GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
L G+ERQ SVY+GLQ + E+V IHD ARP V + +++ A++ GAA+ V
Sbjct: 76 LTDGGEERQHSVYNGLQALA-GEEIVLIHDGARPFVRVHHLHELVNAAVQYGAAIPAVRV 134
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK+AN FV +T+DR +LW +QTPQ + L+ + E + G TDD S+VE +
Sbjct: 135 KDTIKKANG-LFVEQTIDRSSLWAVQTPQAFRLSLIMEAHEAAKQAGYLGTDDASLVERI 193
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERIL 207
PV I EG Y NIK+TTP+DLL AE IL
Sbjct: 194 GKPVKIIEGDYRNIKLTTPEDLLFAEAIL 222
>sp|A4J0Y3|ISPD_DESRM 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Desulfotomaculum reducens (strain MI-1) GN=ispD PE=3
SV=1
Length = 234
Score = 154 bits (388), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 127/210 (60%), Gaps = 3/210 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
MG + KQYL L +PI ++ ++ ++ IV+V P + +E K N+ K
Sbjct: 17 MGTEVKKQYLKLQDRPILAHTIDALEQVPDITGIVLVVSPGEETLCQELILKGNLFNKIM 76
Query: 61 --LPGKE-RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
+PG + RQ SVY GL + ++ELV IHD ARPLV ++ ++ +A RVGAA L VP
Sbjct: 77 AVVPGGDHRQTSVYHGLCSLPGDTELVVIHDGARPLVQRAEISHIIKEARRVGAAALAVP 136
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 177
K T+K N + +V+ T +R+ LW +QTPQV +L+ K + +G+ TDD ++VE
Sbjct: 137 VKDTVKLVNDQGYVIATPNREKLWAVQTPQVFNYELILKAHQDAREKGVYATDDCALVEA 196
Query: 178 LKHPVYITEGSYTNIKVTTPDDLLIAERIL 207
L PV + +GSY NIK+TTP+D+++A+ L
Sbjct: 197 LGQPVKLVQGSYENIKITTPEDMVMAQAFL 226
>sp|Q824I4|ISPD_CHLCV 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydophila caviae (strain GPIC) GN=ispD PE=3 SV=2
Length = 212
Score = 150 bits (380), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 118/207 (57%), Gaps = 12/207 (5%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
GAN PKQYLP G+P+ L++ T + E+ E++VVCD SY IFE +KF+
Sbjct: 18 FGANQPKQYLPFQGEPLILHALKTALHIPEITEVIVVCDVSYRHIFE------GFPVKFA 71
Query: 61 LPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKA 120
GK RQDSV+SGLQ V ++ V IHD RP + +V +++ A + GAA L
Sbjct: 72 ESGKRRQDSVFSGLQHV--SNPWVLIHDGVRPFIYPDEVTELIAVAQQTGAATLVSNVPY 129
Query: 121 TIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKH 180
TIK+ + V+TLDR L + TPQ +K ++L G E +REG+ + DD E L
Sbjct: 130 TIKQRHP----VKTLDRDALSIVHTPQCVKTEILSAGLEFASREGITLVDDTQAAELLDI 185
Query: 181 PVYITEGSYTNIKVTTPDDLLIAERIL 207
PV + + IK+T P+DL IA +L
Sbjct: 186 PVSLVSSKHPQIKITYPEDLTIAHALL 212
>sp|A4IJG4|ISPD_GEOTN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=ispD PE=3 SV=1
Length = 228
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 124/209 (59%), Gaps = 4/209 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LK 58
M A M KQ++ L G+P+ + + F IV+V +P+ FE+ E+ + +
Sbjct: 16 MNAGMNKQFIELGGEPLIVRTLKVFDGDERCNGIVLVVNPTERGQFEQLFERYRIRKVVA 75
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
F+ G+ERQ SVY+GLQ + + E+V IHD ARP V + + ++ A++ GAA+ V
Sbjct: 76 FADGGQERQHSVYNGLQALR-SGEIVLIHDGARPFVRIRHLHELADAAVQYGAAIPAVRV 134
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK+ + FV +T+DR +LW +QTPQ + L+ + E + G TDD S+VE L
Sbjct: 135 KDTIKKVDG-LFVEQTIDRSSLWAVQTPQAFRLSLIMEAHEEAKKAGYLGTDDASLVERL 193
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERIL 207
PV I EG Y NIK+TTP+DLL AE IL
Sbjct: 194 GRPVKILEGDYRNIKLTTPEDLLFAEAIL 222
>sp|Q8R7S6|ISPD_THETN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Thermoanaerobacter tengcongensis (strain DSM 15242 /
JCM 11007 / NBRC 100824 / MB4) GN=ispD PE=3 SV=1
Length = 227
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 123/210 (58%), Gaps = 3/210 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEET---KEKINVDL 57
M ++ K YL + G+P+ YS F + +KEI+VV P ++ +E K N
Sbjct: 16 MNKSLNKVYLSIAGKPVLYYSIKAFDEIEWIKEIIVVTSPEETEYCQENVLEKFYWNKPF 75
Query: 58 KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
K G+ERQ SVY+G+ VD + E+V IHD ARPLV + + + + A AA +GVP
Sbjct: 76 KIVKGGEERQYSVYNGISVVDKDCEIVAIHDGARPLVTKEIIMEAIKAAYLYKAAAVGVP 135
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 177
K TIK A+ ++F++ T DR+ LW +QTPQV + +L+ K EG TDD +VE
Sbjct: 136 VKDTIKVADEDNFILDTPDRRYLWAIQTPQVFEKELIVKAHRKALEEGFLGTDDSVLVER 195
Query: 178 LKHPVYITEGSYTNIKVTTPDDLLIAERIL 207
+ V + EG Y NIK+TTP+DL++AE L
Sbjct: 196 MGFKVKLVEGDYKNIKITTPEDLVVAELFL 225
>sp|Q253C1|ISPD_CHLFF 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydophila felis (strain Fe/C-56) GN=ispD PE=3
SV=1
Length = 212
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 118/207 (57%), Gaps = 12/207 (5%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
GAN PKQYLP GQP+ L++ + + E+ EI+VVCD SY IFE +KF+
Sbjct: 18 FGANQPKQYLPFQGQPLILHALNSALLIPEINEIIVVCDASYEHIFE------GYSVKFA 71
Query: 61 LPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKA 120
G RQDSV+SGL V + V +HD RP + +V ++++ A + GAA L
Sbjct: 72 PAGMRRQDSVFSGLHHV--TNPWVLVHDGVRPFIYPDEVSELIVIAQQTGAATLVSNVPY 129
Query: 121 TIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKH 180
TIK+ N V+TLDR +L + TPQ IK ++L +G EL +RE + + DD E L
Sbjct: 130 TIKQRNP----VKTLDRDSLSIVHTPQCIKTEILLEGLELADREQITLVDDTQAAELLGI 185
Query: 181 PVYITEGSYTNIKVTTPDDLLIAERIL 207
PV + + IK+T P+DL IA +L
Sbjct: 186 PVSLVSNKHPQIKITYPEDLTIAHALL 212
>sp|A7Z0L2|ISPD_BACA2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus amyloliquefaciens (strain FZB42) GN=ispD
PE=3 SV=1
Length = 232
Score = 146 bits (369), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 120/214 (56%), Gaps = 5/214 (2%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE--TKEKINVDLK 58
M A K ++ L G P+ +++ F ++I++V + S + F + + I +++
Sbjct: 16 MKAGKNKLFISLKGAPVIIHTLRVFESHAPCQKIILVINESEREDFRQLLAQFPIQTEIE 75
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
G ERQ SVY GL+ +D S +V +HD ARP V + + K++ A GAAVL VP
Sbjct: 76 LVTGGAERQHSVYEGLKMIDKES-VVLVHDGARPFVTHQHIDKLVETAEEAGAAVLAVPV 134
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK A S V T DR +LW +QTPQ + LLK +G TDD S+VE L
Sbjct: 135 KDTIKRAEG-SRVAETFDRSSLWAVQTPQAFRLSLLKTAHMEAENKGFLGTDDASLVERL 193
Query: 179 -KHPVYITEGSYTNIKVTTPDDLLIAERILNLSS 211
+ V I EGSYTNIK+TTPDDL+ AE I+ S
Sbjct: 194 DGYQVSIVEGSYTNIKLTTPDDLIFAEAIMKAES 227
>sp|Q0SQB9|ISPD_CLOPS 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium perfringens (strain SM101 / Type A)
GN=ispD PE=3 SV=1
Length = 225
Score = 146 bits (369), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 121/210 (57%), Gaps = 5/210 (2%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
MGA + KQ++ + G+PI Y+ F ++ EI++V D F+ E D K S
Sbjct: 17 MGAEVSKQFIEINGKPIIYYTLKAFEECKDIDEIILVLPKDEIDYFKREIEP-RFDFKIS 75
Query: 61 L---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
GKERQDSVY+ L + + ++V IHD AR V +K ++ + + GAA GV
Sbjct: 76 KIIEGGKERQDSVYNALNSIG-DCDIVLIHDGARAFVSNKIIEDGIKYSREFGAAAPGVM 134
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 177
K TIK N E F V T +R +L +QTPQ K +L+KKG V E ++VTDD IVE
Sbjct: 135 PKDTIKVKNLEGFSVDTPNRASLVAVQTPQCFKYNLIKKGHNKVKNEKIQVTDDTMIVEL 194
Query: 178 LKHPVYITEGSYTNIKVTTPDDLLIAERIL 207
L VY+ EG Y NIKVTTP+DL++AE +
Sbjct: 195 LGEKVYLFEGDYKNIKVTTPEDLILAEHFV 224
>sp|Q5L6V2|ISPD_CHLAB 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydophila abortus (strain S26/3) GN=ispD PE=3
SV=1
Length = 217
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 117/207 (56%), Gaps = 12/207 (5%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
GAN PKQYLP G+P+ L++ R+ E+ EI+VVCD +Y IFE +KF+
Sbjct: 23 FGANQPKQYLPFRGEPLILHALNMALRIPEISEIIVVCDVNYESIFE------GYPVKFA 76
Query: 61 LPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKA 120
PG RQDSV+SGLQ+V + V +HD RP + +V +++ A + GAA L
Sbjct: 77 RPGTRRQDSVFSGLQQV--ANPWVLVHDGVRPFIYPDEVTELVTAAYQTGAATLVSNVPY 134
Query: 121 TIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKH 180
TIK+ + V+TLDR L + TPQ IK +L +G E N+E + + DD E L
Sbjct: 135 TIKQRDP----VKTLDRDALSIVHTPQCIKTQILLEGLERANQERITLVDDTQAAELLNL 190
Query: 181 PVYITEGSYTNIKVTTPDDLLIAERIL 207
PV + + IKVT P+DL +A +L
Sbjct: 191 PVALVFNKHPQIKVTYPEDLTLAHALL 217
>sp|Q8XHQ3|ISPD_CLOPE 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium perfringens (strain 13 / Type A) GN=ispD
PE=3 SV=1
Length = 225
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 120/210 (57%), Gaps = 5/210 (2%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
MGA + KQ++ + G+PI Y+ F + EI++V D F+ E D K S
Sbjct: 17 MGAEVSKQFIEINGKPIIYYTLKAFEECKGIDEIILVLPKDEIDYFKREIEP-RFDFKIS 75
Query: 61 L---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
GKERQDSVY+ L + + ++V IHD AR V +K ++ + + GAA GV
Sbjct: 76 KIIEGGKERQDSVYNALNSIG-DCDIVLIHDGARAFVSNKIIEDGIKYSREFGAAAPGVM 134
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 177
K TIK N E F V T +R +L +QTPQ K +L+KKG V E ++VTDD IVE
Sbjct: 135 PKDTIKVKNLEGFSVDTPNRASLVAVQTPQCFKYNLIKKGHNKVKNEKIQVTDDTMIVEL 194
Query: 178 LKHPVYITEGSYTNIKVTTPDDLLIAERIL 207
L VY+ EG Y NIKVTTP+DL++AE +
Sbjct: 195 LGEKVYLFEGDYKNIKVTTPEDLILAEHFV 224
>sp|Q0TMM2|ISPD_CLOP1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=ispD PE=3 SV=1
Length = 225
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 120/210 (57%), Gaps = 5/210 (2%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
MGA + KQ++ + G+PI Y+ F + EI++V D F+ E D K S
Sbjct: 17 MGAEVSKQFIEINGKPIIYYTLKAFEECKGIDEIILVLPKDEIDYFKREIEP-RFDFKIS 75
Query: 61 L---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
GKERQDSVY+ L + + ++V IHD AR V +K ++ + + GAA GV
Sbjct: 76 KIIEGGKERQDSVYNALNSIG-DCDIVLIHDGARAFVSNKIIEDGIKYSREFGAAAPGVM 134
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 177
K TIK N E F V T +R +L +QTPQ K +L+KKG V E ++VTDD IVE
Sbjct: 135 PKDTIKVKNLEGFSVDTPNRASLVAVQTPQCFKYNLIKKGHNKVKNEKIQVTDDTMIVEL 194
Query: 178 LKHPVYITEGSYTNIKVTTPDDLLIAERIL 207
L VY+ EG Y NIKVTTP+DL++AE +
Sbjct: 195 LGEKVYLFEGDYKNIKVTTPEDLILAEHFV 224
>sp|A7GJ99|ISPD_CLOBL 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Langeland / NCTC 10281
/ Type F) GN=ispD PE=3 SV=1
Length = 229
Score = 144 bits (364), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 126/209 (60%), Gaps = 2/209 (0%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--K 58
M +++ KQ+L + +PI Y+ FS + EIV+V ++ + +K N++ K
Sbjct: 17 MNSSISKQFLQIKNKPILYYTLSKFSAHESIDEIVLVTLEDKIEVCSDIIDKYNINKVSK 76
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + A + GAA GV
Sbjct: 77 IVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRCANQYGAAACGVIP 136
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK N + F + T +R+ L+ +QTPQ +++ E + + +VTDD ++E+
Sbjct: 137 KDTIKIKNEKEFAIDTPNREDLFIVQTPQCFNYNIILDCHEKLKKHNKKVTDDTMVLENY 196
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERIL 207
VY+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 197 GKSVYLYEGSYSNIKITTPEDLILGEQIL 225
>sp|A5I7N1|ISPD_CLOBH 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC
13319 / Type A) GN=ispD PE=3 SV=1
Length = 229
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 125/209 (59%), Gaps = 2/209 (0%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--K 58
M +++ KQ+L + +PI Y+ FS + EIV+V ++ + +K N++ K
Sbjct: 17 MNSSISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCSDIIDKYNINKVSK 76
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + + GAA GV
Sbjct: 77 IVPGGKERQDSVYNGLKGVSKDCEVVLIHDAARPFVTSDIIENGIRYTNQYGAAACGVIP 136
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK N + F + T +R+ L+ +QTPQ +++ E + + +VTDD ++E+
Sbjct: 137 KDTIKIKNEKGFAIDTPNREDLFIVQTPQCFNYNIILSCHEKLKKHNKKVTDDTMVLENY 196
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERIL 207
VY+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 197 GKSVYLYEGSYSNIKITTPEDLILGEQIL 225
>sp|A7FZ94|ISPD_CLOB1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain ATCC 19397 / Type A)
GN=ispD PE=3 SV=1
Length = 229
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 125/209 (59%), Gaps = 2/209 (0%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--K 58
M +++ KQ+L + +PI Y+ FS + EIV+V ++ + +K N++ K
Sbjct: 17 MNSSISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCSDIIDKYNINKVSK 76
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + + GAA GV
Sbjct: 77 IVPGGKERQDSVYNGLKGVSKDCEVVLIHDAARPFVTSDIIENGIRYTNQYGAAACGVIP 136
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK N + F + T +R+ L+ +QTPQ +++ E + + +VTDD ++E+
Sbjct: 137 KDTIKIKNEKGFAIDTPNREDLFIVQTPQCFNYNIILSCHEKLKKHNKKVTDDTMVLENY 196
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERIL 207
VY+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 197 GKSVYLYEGSYSNIKITTPEDLILGEQIL 225
>sp|C1FMX6|ISPD_CLOBJ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Kyoto / Type A2)
GN=ispD PE=3 SV=1
Length = 229
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 125/209 (59%), Gaps = 2/209 (0%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--K 58
M +++ KQ+L + +PI Y+ FS + EIV+V ++ + +K N++ K
Sbjct: 17 MNSSISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCGDIIDKYNINKVSK 76
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + + GAA GV
Sbjct: 77 IVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYTNQYGAAACGVIP 136
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK N + F + T +R+ L+ +QTPQ +++ E + + +VTDD ++E+
Sbjct: 137 KDTIKIKNEKGFAIDTPNREDLFIVQTPQCFNYNIILSCHEKLKKHNKKVTDDTMVLENY 196
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERIL 207
VY+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 197 GKSVYLYEGSYSNIKITTPEDLILGEQIL 225
>sp|B1KTA8|ISPD_CLOBM 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Loch Maree / Type A3)
GN=ispD PE=3 SV=1
Length = 229
Score = 142 bits (357), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 123/209 (58%), Gaps = 2/209 (0%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEK--INVDLK 58
M +++ KQ+L + +PI Y+ FS + EIV+V ++ E +K IN K
Sbjct: 17 MNSSISKQFLQIKNKPILYYTLNKFSTHESIDEIVLVTLEDKIEVCSEIIDKYSINKVSK 76
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + A + GAA G+
Sbjct: 77 IVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYANQYGAAACGIIP 136
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK N + F + T +R+ L+ QTPQ +++ E + + +VTDD ++E
Sbjct: 137 KDTIKIKNEKGFAIDTPNREDLFIAQTPQCFNYNIILDCHEKLKKHNKKVTDDTMVLEDY 196
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERIL 207
VY+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 197 GKSVYLYEGSYSNIKITTPEDLILGEQIL 225
>sp|Q9PJT1|ISPD_CHLMU 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydia muridarum (strain MoPn / Nigg) GN=ispD PE=3
SV=1
Length = 218
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 114/203 (56%), Gaps = 12/203 (5%)
Query: 6 PKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKE 65
PKQY PL G+P+ L++ +++ + ++EIVVVC+ Y ++F +KF+ PG
Sbjct: 23 PKQYTPLCGEPLILHALHSYQSLPFIQEIVVVCEEHYQELFSP------YSVKFASPGAL 76
Query: 66 RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEA 125
RQDSV+SGLQ+V VC+HD RP V + +V +V AL+ GAA L A TIK
Sbjct: 77 RQDSVFSGLQQVSL--PWVCVHDGVRPFVYANEVSEVCSAALKTGAAALATSATYTIKSR 134
Query: 126 NSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYIT 185
VRTLDR + + TPQ I ++LK+G L N ++DD E L +
Sbjct: 135 TP----VRTLDRDAVAVIHTPQCINTEILKEGLLLANMMDFTLSDDSEAAELLGIEPTLV 190
Query: 186 EGSYTNIKVTTPDDLLIAERILN 208
+ +K+T P+DLL AE +L+
Sbjct: 191 FSNRVQMKITYPEDLLFAEALLS 213
>sp|Q2RFM0|ISPD_MOOTA 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Moorella thermoacetica (strain ATCC 39073) GN=ispD
PE=3 SV=1
Length = 229
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 112/212 (52%), Gaps = 8/212 (3%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDP-----SYSDIFEETKEKINV 55
+G + K +LPL G+P+ YS V EI++V P + E K+
Sbjct: 17 LGREVNKVFLPLAGKPMLAYSLAVAVASPLVDEIIIVTRPDDIPLCRQVVAGEGAGKVKA 76
Query: 56 DLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLG 115
+ G ERQDS+ GL+ V +E V +HD ARP + ++K ++ A GAA+
Sbjct: 77 IVAG---GAERQDSIAEGLKAVARAAEWVAVHDGARPFLTPALLEKTILAARNTGAAIAA 133
Query: 116 VPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIV 175
+P K TIK+ V TLDRK LW QTPQV + + L + +G + TDD ++V
Sbjct: 134 LPVKETIKQGGEAGIVAATLDRKGLWSAQTPQVFRREWLVDAYREAAEKGWQATDDAALV 193
Query: 176 EHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 207
E L +PV + G TNIK+TTP DL++A +L
Sbjct: 194 ERLGYPVKLVPGEETNIKITTPGDLVLAGALL 225
>sp|A8MLB1|ISPD_ALKOO 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Alkaliphilus oremlandii (strain OhILAs) GN=ispD PE=3
SV=1
Length = 236
Score = 140 bits (354), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 118/216 (54%), Gaps = 3/216 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
MG + KQY+ L QPI ++ F M + EI++V + +++ ++ K S
Sbjct: 20 MGRDYNKQYIQLEAQPIVAHTIKVFEEMDCINEIILVVGAGEVEFLKKSIIEVYGFQKVS 79
Query: 61 L---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
G ER+DSVY+GL+ V + +V IHD ARPL+ +++ ++ A GA + VP
Sbjct: 80 AIVEGGLERRDSVYNGLKAVSQDCSIVLIHDGARPLITKDIIEESIIVAKESGACIAAVP 139
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 177
K TIK +N V+ T R LW +QTPQ + DL+ + + + TDD I+E
Sbjct: 140 VKDTIKISNDNMEVIHTPKRDNLWSVQTPQTFQYDLILEAYNHQQPKDSTATDDAMILEA 199
Query: 178 LKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSES 213
L H V I GSY NIK+TTP+DL++AE IL E
Sbjct: 200 LGHTVKIIHGSYNNIKITTPEDLIVAEEILKTRREG 235
>sp|C3KVS6|ISPD_CLOB6 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain 657 / Type Ba4) GN=ispD
PE=3 SV=1
Length = 229
Score = 140 bits (353), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 125/209 (59%), Gaps = 2/209 (0%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--K 58
M +++ KQ+L + +PI Y+ FS + EIV+V ++ + +K N++ K
Sbjct: 17 MNSSISKQFLQIKNKPILYYTLNKFSTHESIDEIVLVALEDKIEVCSDIIDKYNINKVSK 76
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + + GAA GV
Sbjct: 77 IVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYVNQYGAAACGVIP 136
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K T+K + + F + T +R+ L+ +QTPQ +++ E + + +VTDD ++E+
Sbjct: 137 KDTVKIKDEKGFAIDTPNREDLFIVQTPQCFNYNIILDCHEKLKKHNKKVTDDTMVLENY 196
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERIL 207
VY+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 197 GKSVYLYEGSYSNIKITTPEDLILGEQIL 225
>sp|B1IGH9|ISPD_CLOBK 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Okra / Type B1) GN=ispD
PE=3 SV=1
Length = 229
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 125/209 (59%), Gaps = 2/209 (0%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--K 58
M +++ KQ+L + +PI Y+ FS + EIV+V ++ + +K N++ K
Sbjct: 17 MNSSISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCGDIIDKYNINKVSK 76
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + + GAA GV
Sbjct: 77 IVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYTNQYGAAACGVIP 136
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK + + F + T +R+ L+ +QTPQ +++ E + + +VTDD ++E+
Sbjct: 137 KDTIKIKSEKGFAIDTPNREDLFIVQTPQCFNYNIILDCHEKLKKHNKKVTDDTMVLENY 196
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERIL 207
VY+ EG+Y+NIK+TTP+DL++ E+IL
Sbjct: 197 GKSVYLYEGNYSNIKITTPEDLILGEQIL 225
>sp|A5D5L4|ISPD_PELTS 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Pelotomaculum thermopropionicum (strain DSM 13744 /
JCM 10971 / SI) GN=ispD PE=3 SV=1
Length = 238
Score = 137 bits (344), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 117/210 (55%), Gaps = 3/210 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK-EKINVDLKF 59
MG KQYL L G P+ + VK +V V P + F T E++ +
Sbjct: 17 MGTETRKQYLSLAGLPVVGHVLRAMEASSAVKSVVTVVAPGEENYFRLTVVERLGIRKVA 76
Query: 60 SL--PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
++ G+ERQDSVY+GL + ++ +V +HD ARPL+ D+ V+ A GAA L VP
Sbjct: 77 AIVPGGEERQDSVYNGLLALAPDTGIVVVHDGARPLLSPGDINAVVQAAAAYGAATLAVP 136
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 177
K T+K A + FV+RTL R+ LW +QTPQ + D++ ++ TDD +VE
Sbjct: 137 VKDTVKMAGRDGFVLRTLSREHLWLVQTPQAFRYDIIMNAHRQARQKKYAATDDAGLVEL 196
Query: 178 LKHPVYITEGSYTNIKVTTPDDLLIAERIL 207
L PV I GSY NIK+TTP+DL +AE ++
Sbjct: 197 LGRPVKIVAGSYENIKITTPEDLTVAEAVI 226
>sp|Q2LUS9|ISPD_SYNAS 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Syntrophus aciditrophicus (strain SB) GN=ispD PE=3
SV=1
Length = 234
Score = 136 bits (343), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 121/216 (56%), Gaps = 13/216 (6%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
M ++ PKQY + G P+ +++ + + EI++V P +F N++ +
Sbjct: 18 MQSSNPKQYFLINGMPVLVHTLLRLQQFPLIDEILLVV-PHSDMVFVRD----NIEKPYQ 72
Query: 61 LP--------GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAA 112
L G+ERQDSV +GL+ V E+V IHD RP V K + +V+ A R GAA
Sbjct: 73 LTKIRGIVAGGRERQDSVRNGLKCVVEKDEIVVIHDGVRPFVTEKILSRVIDAAHRSGAA 132
Query: 113 VLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDV 172
+ VPA T+KE +S+ + TLDRK +W QTPQ ++++ ++ ++ TDD
Sbjct: 133 IAAVPAMDTVKEVHSDGHISVTLDRKRIWLAQTPQAFHRRIIQEAYKKAVQDDYYGTDDA 192
Query: 173 SIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN 208
S+VE L PV + GS TNIK+TTPDDL++AE L
Sbjct: 193 SLVERLGIPVEVVPGSCTNIKITTPDDLILAEAFLK 228
>sp|Q18CD1|ISPD_CLOD6 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium difficile (strain 630) GN=ispD PE=3 SV=1
Length = 237
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 3/211 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK-EKINV-DLK 58
M ++ KQ++ L + I ++ F + + EIVV D F+E K N ++K
Sbjct: 15 MNLDINKQFIKLREKEIIAHTIQVFYENINIDEIVVCIKKEEEDFFKENIINKYNFKNIK 74
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
+ GKERQDS+Y+GL+++D N ++V IHD ARP V + + + + A A V+GVP
Sbjct: 75 IAYGGKERQDSIYNGLKKLDKNCDIVLIHDGARPFVDHRIINESIKVAKEKKAVVVGVPV 134
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
TIK S+ V T +R LW QTPQ + +L+ +E + TDD +VE++
Sbjct: 135 SDTIKIV-SDGTVKETPERNLLWAAQTPQTFEYNLIIDAYEQAYKNNYYGTDDSMLVENI 193
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERILNL 209
V + GSY NIK+T+P+DL IAE+ILN+
Sbjct: 194 GQSVTMVMGSYENIKITSPEDLNIAEQILNM 224
>sp|A9VN98|ISPD_BACWK 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus weihenstephanensis (strain KBAB4) GN=ispD
PE=3 SV=1
Length = 226
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 119/214 (55%), Gaps = 4/214 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LK 58
MGA K +L + G PI +++ F + K I++ + FEE +K V+ ++
Sbjct: 15 MGAGKNKLFLLINGVPIIVHTLRAFEKDKACKRIIMAINEEERPYFEELMQKYPVEKQVQ 74
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
F G ERQDSVY+ LQ V E V +HD ARP V +K +Q VL A + GA++ VP
Sbjct: 75 FIQGGAERQDSVYNALQYVS-GVEYVLVHDGARPFVTNKMMQDVLTAAEKYGASICAVPV 133
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK+ + VV T++R L +QTPQ LL + + TDD S+VE +
Sbjct: 134 KDTIKKVE-QGVVVETVERSQLKAVQTPQGFSVPLLLEAHRSAKQSCFLGTDDASLVERV 192
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERILNLSSE 212
V + EGSY NIKVTTP+DLLIAE L++ +
Sbjct: 193 GKKVGVVEGSYYNIKVTTPEDLLIAESFLHVQKK 226
>sp|B1I0S9|ISPDF_DESAP Bifunctional enzyme IspD/IspF OS=Desulforudis audaxviator (strain
MP104C) GN=ispDF PE=3 SV=1
Length = 394
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 110/214 (51%), Gaps = 10/214 (4%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
MG KQY L G+P+ + F V +V+V P D +E+I F+
Sbjct: 17 MGEGPKKQYRLLAGRPVLGRTLEVFEHAPAVDGVVLVVAPGEEDW---CREEIVTRFGFT 73
Query: 61 -----LPGKE-RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVL 114
+PG E R+DSV++GLQ + LV +HD RP V ++ + V A GAA L
Sbjct: 74 KVVAVVPGGEVRRDSVWAGLQALP-PCALVLVHDGVRPFVTARQIAAVAEAARECGAATL 132
Query: 115 GVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSI 174
VP K T+K V TL R+ LW +QTPQ + D+L K L GL TDD S+
Sbjct: 133 AVPPKDTVKLGGPPGAPVSTLPRENLWLVQTPQAFRFDVLIKAHHLARERGLAATDDTSL 192
Query: 175 VEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN 208
E + V + G+YTNIK+TTP+DL AE +L
Sbjct: 193 AEAAGYDVRMVPGAYTNIKITTPEDLAFAEALLG 226
>sp|A8F958|ISPD_BACP2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus pumilus (strain SAFR-032) GN=ispD PE=3 SV=1
Length = 229
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 5/211 (2%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
M A K ++ L P+ +++ F + K +++ + FE + S
Sbjct: 16 MKAGRNKLFIELKRMPVIIHTLKVFDAHAQCKRMILAINEEERQDFERLLKVHAFQTPVS 75
Query: 61 L--PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
L G+ERQ SVY GL+ V ++++V +HD ARP + + ++ A+ G+AV+ VP
Sbjct: 76 LVNGGEERQQSVYEGLKAVK-DADIVLVHDGARPFIKHTQIDLLVKAAIEKGSAVVAVPV 134
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK E V +T++R++LW +QTPQ + +LK+ E R G TDD S+VE L
Sbjct: 135 KDTIKRVQ-EGKVEQTIERQSLWAVQTPQAFRHSILKEAHEYAERTGFLGTDDASLVEQL 193
Query: 179 K-HPVYITEGSYTNIKVTTPDDLLIAERILN 208
VYI +G YTNIK+TTPDDLL+A+ I++
Sbjct: 194 HGENVYIVQGDYTNIKLTTPDDLLVAKAIMD 224
>sp|Q9KGF8|ISPD_BACHD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197
/ FERM 7344 / JCM 9153 / C-125) GN=ispD PE=3 SV=1
Length = 228
Score = 134 bits (336), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 4/209 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE--TKEKINVDLK 58
M A KQ++ L G+PI ++ F + +V+V + + E + +I+ K
Sbjct: 16 MRAGHNKQFIELGGKPILAHTLAVFEQDDWCTNVVIVANEQEIEEMGELANRYQISKAKK 75
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
G+ERQ+SV++GL+ + + LV IHD ARP V K++ ++ A + AAVL VP
Sbjct: 76 IVAGGRERQESVFAGLKALSQDG-LVLIHDGARPFVTEKEIHSLVETAAKTHAAVLAVPV 134
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK E+ V+ T+ R+ LW +QTPQ L+K+ + E + TDD S++E L
Sbjct: 135 KDTIKRVEGEA-VLETMPREELWAVQTPQAFDLALIKQAHQKAENEQMLGTDDASLMEWL 193
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERIL 207
+ V + +GSY N K+TTP+DLL AE IL
Sbjct: 194 GYSVAVVQGSYFNFKLTTPEDLLFAEAIL 222
>sp|Q06755|ISPD_BACSU 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus subtilis (strain 168) GN=ispD PE=3 SV=2
Length = 232
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 118/214 (55%), Gaps = 5/214 (2%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE--TKEKINVDLK 58
M A K ++ L G P+ +++ F + +I++V + + F++ + ++
Sbjct: 16 MKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHFQQLLSDYPFQTSIE 75
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
G ERQ SVY GL+ V ++V +HD ARP + + + +++ +A + GAA+L VP
Sbjct: 76 LVAGGDERQHSVYKGLKAVK-QEKIVLVHDGARPFIKHEQIDELIAEAEQTGAAILAVPV 134
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK V T++R +LW +QTPQ + LL K R+G TDD S+VE +
Sbjct: 135 KDTIKRVQDLQ-VSETIERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQM 193
Query: 179 K-HPVYITEGSYTNIKVTTPDDLLIAERILNLSS 211
+ V + EGSYTNIK+TTPDDL AE I+ S
Sbjct: 194 EGGSVRVVEGSYTNIKLTTPDDLTSAEAIMESES 227
>sp|A5N4M5|ISPD_CLOK5 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 /
NCIMB 10680) GN=ispD PE=3 SV=1
Length = 231
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 10/210 (4%)
Query: 5 MP--KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVD--L 57
MP KQ++ + G+PI YS FS+ V +IV+VC + Y +E +K N D +
Sbjct: 19 MPINKQFICIQGKPILYYSISVFSKNPLVDKIVLVCAEDEIEYCK--QEIVKKYNFDKVV 76
Query: 58 KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
K GKERQ SV++ L+ ++ N +V IHD ARP V + ++ + + GA GV
Sbjct: 77 KIVSGGKERQHSVFNALKVLE-NCSVVLIHDGARPFVTDRIIEDGIKYSNMYGACACGVV 135
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 177
K TIK E F +TL RK L+ +QTPQ +L+ + + ++VTDD ++ E+
Sbjct: 136 PKDTIKIKGKEGFSYKTLVRKELFIVQTPQCFDYNLIYDCHKKLANNKVQVTDDTTVAEY 195
Query: 178 LKHPVYITEGSYTNIKVTTPDDLLIAERIL 207
+ VY+ EGSY NIK+TTP+DL+IAE I
Sbjct: 196 FGNMVYLYEGSYDNIKITTPEDLIIAENIF 225
>sp|B9DY87|ISPD_CLOK1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium kluyveri (strain NBRC 12016) GN=ispD PE=3
SV=1
Length = 231
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 10/210 (4%)
Query: 5 MP--KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVD--L 57
MP KQ++ + G+PI YS FS+ V +IV+VC + Y +E +K N D +
Sbjct: 19 MPINKQFICIQGKPILYYSISVFSKNPLVDKIVLVCAEDEIEYCK--QEIVKKYNFDKVV 76
Query: 58 KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
K GKERQ SV++ L+ ++ N +V IHD ARP V + ++ + + GA GV
Sbjct: 77 KIVSGGKERQHSVFNALKVLE-NCSVVLIHDGARPFVTDRIIEDGIKYSNMYGACACGVV 135
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 177
K TIK E F +TL RK L+ +QTPQ +L+ + + ++VTDD ++ E+
Sbjct: 136 PKDTIKIKGKEGFSYKTLVRKELFIVQTPQCFDYNLIYDCHKKLANNKVQVTDDTTVAEY 195
Query: 178 LKHPVYITEGSYTNIKVTTPDDLLIAERIL 207
+ VY+ EGSY NIK+TTP+DL+IAE I
Sbjct: 196 FGNMVYLYEGSYDNIKITTPEDLIIAENIF 225
>sp|B2TIF4|ISPD_CLOBB 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Eklund 17B / Type B)
GN=ispD PE=3 SV=1
Length = 224
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 116/214 (54%), Gaps = 11/214 (5%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSY------SDIFEETKEKIN 54
MG KQYL L G+PI Y+ +F V I++V PS+ +I E+ K+N
Sbjct: 15 MGTVQSKQYLSLNGKPILYYTIKSFLDCKLVDNIILVV-PSHEIDYCEKEILEKNSLKVN 73
Query: 55 VDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVL 114
K G ER DSVY+GL E S++V IHD RP V + ++ + + GAA
Sbjct: 74 ---KIVAGGDERYDSVYNGLIEAK-GSDIVLIHDGVRPFVSKETIENAIKYSEEYGAAAP 129
Query: 115 GVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSI 174
GV K TIK + F + T +R L +QTPQ K DL+ + + E + +TDD +
Sbjct: 130 GVMPKDTIKIIDDNRFSIDTPNRSHLISVQTPQAFKFDLIYDCHKKIKNENVNITDDTMV 189
Query: 175 VEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN 208
E+ + VYI G YTNIK+TTP+DL+I E ++N
Sbjct: 190 AEYFGNKVYIYPGEYTNIKITTPEDLIIGEYLVN 223
>sp|B5YF77|ISPD_DICT6 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM
3960 / H-6-12) GN=ispD PE=3 SV=1
Length = 231
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 120/205 (58%), Gaps = 12/205 (5%)
Query: 14 GQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS------LPGKERQ 67
G PI YS + ++++I++V +++ E KEKI D K L G+ERQ
Sbjct: 28 GMPIVYYSIRKLHDIKDIEKIILVVR---NEMLEYYKEKIK-DWKLEKVYKLVLGGEERQ 83
Query: 68 DSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVG-AAVLGVPAKATIKEA- 125
DSVY+ L+ VDF+ + V IHD+ARP V K +++++ +A+LG+P K TIK
Sbjct: 84 DSVYNALKSVDFHCDYVLIHDAARPFVSIKKIEELIKFCTENSLSAILGIPVKDTIKVVD 143
Query: 126 NSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYIT 185
N+ ++ TLDR LW +QTPQ+ +++K+ + E TDD S+VE L PVY+
Sbjct: 144 NTTKRIMETLDRSKLWIIQTPQMFPFEIIKEAHKKAREENFVGTDDASLVERLGIPVYVI 203
Query: 186 EGSYTNIKVTTPDDLLIAERILNLS 210
EG NIK+TT DDLL E IL+ S
Sbjct: 204 EGEPFNIKITTKDDLLWMEGILSKS 228
>sp|A0PXS4|ISPD_CLONN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium novyi (strain NT) GN=ispD PE=3 SV=1
Length = 231
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 115/210 (54%), Gaps = 4/210 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPS-YSDIFEETKEKINVDLKF 59
M ++ KQ++ L G PI Y+ F + IV+V E +K ++D
Sbjct: 17 MNTDINKQFINLKGNPILYYTLKKFQDNTSIDNIVLVLSKDEIGYCVENVLKKYHLDKVT 76
Query: 60 SL--PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
+ GK RQ+SV SGL V +SE+V IHD ARP + + ++ + A GA+ GV
Sbjct: 77 HIVEGGKTRQESVISGLNAVK-DSEIVLIHDGARPFIEDRIIEDGIKYAKLYGASACGVK 135
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 177
K TIK + F TL R+ L+ +QTPQ K DL+ + ++ +EVTDD S+VE
Sbjct: 136 VKDTIKVIAEDGFSKDTLKREELFSVQTPQCFKYDLILNCHKKALKDNIEVTDDTSVVES 195
Query: 178 LKHPVYITEGSYTNIKVTTPDDLLIAERIL 207
H VY+ EGSY NIK+TTP+DL + E IL
Sbjct: 196 YGHRVYLYEGSYNNIKITTPEDLPMGESIL 225
>sp|Q6HPT2|ISPD_BACHK 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus thuringiensis subsp. konkukian (strain
97-27) GN=ispD PE=3 SV=1
Length = 226
Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 118/214 (55%), Gaps = 4/214 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LK 58
MGA K +L + PI +++ F + K I++ + FEE +K V+ ++
Sbjct: 15 MGAGKNKLFLLINEVPIIVHTLRAFEKDKACKNIIMAINEEERPYFEELMQKYPVEKPVQ 74
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
F G ERQDSVY+ +Q + E V +HD ARP V +K +Q VL A + GA++ VP
Sbjct: 75 FIQGGAERQDSVYNAIQHTT-DVEYVLVHDGARPFVTNKVIQDVLTAAEKYGASICAVPV 133
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K T+K+ + VV T++R L +QTPQ LL + + TDD S+VE +
Sbjct: 134 KDTVKKVE-QGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCFLGTDDASLVERI 192
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERILNLSSE 212
V + EGSY NIKVTTP+DLLIAE L++ +
Sbjct: 193 GKQVGVVEGSYYNIKVTTPEDLLIAESFLHVQKK 226
>sp|Q63HB4|ISPD_BACCZ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus cereus (strain ZK / E33L) GN=ispD PE=3 SV=1
Length = 226
Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 118/214 (55%), Gaps = 4/214 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LK 58
MGA K +L + PI +++ F + K I++ + FEE +K V+ ++
Sbjct: 15 MGAGKNKLFLLINEVPIIVHTLRAFEKDKACKNIIMAINEEERPYFEELMQKYPVEKPVQ 74
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
F G ERQDSVY+ +Q + E V +HD ARP V +K +Q VL A + GA++ VP
Sbjct: 75 FIQGGAERQDSVYNAIQHTT-DVEYVLVHDGARPFVTNKVIQDVLTAAEKYGASICAVPV 133
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K T+K+ + VV T++R L +QTPQ LL + + TDD S+VE +
Sbjct: 134 KDTVKKVE-QGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCFLGTDDASLVERI 192
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERILNLSSE 212
V + EGSY NIKVTTP+DLLIAE L++ +
Sbjct: 193 GKQVGVVEGSYYNIKVTTPEDLLIAESFLHVQKK 226
>sp|Q81VV5|ISPD_BACAN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus anthracis GN=ispD PE=3 SV=1
Length = 226
Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 118/214 (55%), Gaps = 4/214 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LK 58
MGA K +L + PI +++ F + K I++ + FEE +K V+ ++
Sbjct: 15 MGAGKNKLFLLINEVPIIVHTLRAFEKDKACKNIIMAINEEERPYFEELMQKYPVEKPVQ 74
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
F G ERQDSVY+ +Q + E V +HD ARP V +K +Q VL A + GA++ VP
Sbjct: 75 FIQGGAERQDSVYNAIQHTT-DVEYVLVHDGARPFVTNKVIQDVLTAAEKYGASICAVPV 133
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K T+K+ + VV T++R L +QTPQ LL + + TDD S+VE +
Sbjct: 134 KDTVKKVE-QGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCFLGTDDASLVERI 192
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERILNLSSE 212
V + EGSY NIKVTTP+DLLIAE L++ +
Sbjct: 193 GKQVGVVEGSYYNIKVTTPEDLLIAESFLHVQKK 226
>sp|A0R8F7|ISPD_BACAH 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus thuringiensis (strain Al Hakam) GN=ispD PE=3
SV=1
Length = 226
Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 118/214 (55%), Gaps = 4/214 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LK 58
MGA K +L + PI +++ F + K I++ + FEE +K V+ ++
Sbjct: 15 MGAGKNKLFLLINEVPIIVHTLRAFEKDKACKNIIMAINEEERPYFEELMQKYPVEKPVQ 74
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
F G ERQDSVY+ +Q + E V +HD ARP V +K +Q VL A + GA++ VP
Sbjct: 75 FIQGGAERQDSVYNAIQHTT-DVEYVLVHDGARPFVTNKVIQDVLTAAEKYGASICAVPV 133
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K T+K+ + VV T++R L +QTPQ LL + + TDD S+VE +
Sbjct: 134 KDTVKKVE-QGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCFLGTDDASLVERI 192
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERILNLSSE 212
V + EGSY NIKVTTP+DLLIAE L++ +
Sbjct: 193 GKQVGVVEGSYYNIKVTTPEDLLIAESFLHVQKK 226
>sp|Q67JP5|ISPD_SYMTH 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Symbiobacterium thermophilum (strain T / IAM 14863)
GN=ispD PE=3 SV=1
Length = 236
Score = 130 bits (327), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 110/203 (54%), Gaps = 8/203 (3%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
MG KQ+LPL G+P+ + + FS V EIV+ + D+ E T+ + K +
Sbjct: 25 MGGGTAKQFLPLRGEPVLVRTVRRFSECPLVDEIVI----AAGDV-EATRALVGHMPKVT 79
Query: 61 L---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
G ERQDSV++ LQ V +V +HD+ARPL+ + ++ VL A A V+ VP
Sbjct: 80 RIVQGGAERQDSVWAALQAVHSRPRIVAVHDAARPLLTADVLKGVLQAAADHPAQVVAVP 139
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 177
+ TIK+ + VV T DR LW +QTPQV D+L + F +G TDD S+VE
Sbjct: 140 VQDTIKQVGPDGVVVATPDRSMLWAVQTPQVFWADVLVRAFRQAIADGFLGTDDASLVER 199
Query: 178 LKHPVYITEGSYTNIKVTTPDDL 200
+ PV + G N+K+TTP D
Sbjct: 200 IGVPVRVYRGHPGNLKLTTPTDF 222
>sp|Q73FC1|ISPD_BACC1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus cereus (strain ATCC 10987) GN=ispD PE=3 SV=1
Length = 226
Score = 130 bits (327), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 117/214 (54%), Gaps = 4/214 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LK 58
MGA K +L + PI +++ F + K I++ + FEE +K V ++
Sbjct: 15 MGAGKNKLFLLINEVPIIVHTLRAFEKDKACKNIIMAINEEERPYFEELMQKYPVKKPVQ 74
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
F G ERQDSVY+ +Q + E V +HD ARP V +K +Q VL A + GA++ VP
Sbjct: 75 FIQGGAERQDSVYNAIQHTS-DVEYVLVHDGARPFVTNKVIQDVLTAAEKYGASICAVPV 133
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K T+K+ + VV T++R L +QTPQ LL + + TDD S+VE +
Sbjct: 134 KDTVKKVE-QGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCFLGTDDASLVERI 192
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERILNLSSE 212
V + EGSY NIKVTTP+DLLIAE L++ +
Sbjct: 193 GKQVGVVEGSYYNIKVTTPEDLLIAESFLHVQKK 226
>sp|A6TWL0|ISPD_ALKMQ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Alkaliphilus metalliredigens (strain QYMF) GN=ispD
PE=3 SV=1
Length = 241
Score = 130 bits (327), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 118/214 (55%), Gaps = 9/214 (4%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEET---KEKINVDL 57
MG + KQY+ L +PI ++ F + E+ EI++V + + K +
Sbjct: 20 MGRSYNKQYIMLENKPILYHTLAVFEKHSEINEIILVVASGEEEYCQGQIIKKYGLKKVR 79
Query: 58 KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
K G ER++SV +GL+E++ E+V +HD ARP + + + K + A GA ++ VP
Sbjct: 80 KVVAGGSERRNSVKNGLEELEEACEVVLVHDGARPFITKEVITKSIEVAYEEGAVIVAVP 139
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGF---ELVNREGLEVTDDVSI 174
K TIK N + VV T +R+ LW +QTPQV + +LK+ + E R G TDD +
Sbjct: 140 VKDTIKRVNEKMEVVETPERQQLWAVQTPQVFRSGILKRAYKEAEDFERVG---TDDAVL 196
Query: 175 VEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN 208
VE + V + G Y NIKVTTP+DL+I + ILN
Sbjct: 197 VEAAGYTVKVVLGIYENIKVTTPEDLIIGQGILN 230
>sp|A7GJZ7|ISPD_BACCN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98)
GN=ispD PE=3 SV=1
Length = 226
Score = 130 bits (326), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINV--DLK 58
MGA K +L + PI +++ F + ++I++ + FE +K + +++
Sbjct: 15 MGAGKNKLFLLINEVPIIVHTLRAFEKDEACEKIIMAINEQERSDFEALIQKYGIRKNVQ 74
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
F G ERQDSVY LQ V +E V +HD ARP V +K + +VL+ A GA++ VP
Sbjct: 75 FIQGGAERQDSVYHALQYVK-ETEYVLVHDGARPFVTNKMIHEVLIVAKEKGASICAVPV 133
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K TIK+ +++ V T++R L +QTPQ LL + + + G TDD S+VE +
Sbjct: 134 KDTIKKVVNDA-VFETVERSQLRAVQTPQGFSVALLLEAHQSAKQSGFLGTDDASLVERI 192
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERILNL 209
V + EGSY NIKVTTP+DLLIAE L++
Sbjct: 193 GKEVGVVEGSYYNIKVTTPEDLLIAESFLHV 223
>sp|Q97EC9|ISPD_CLOAB 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792
/ JCM 1419 / LMG 5710 / VKM B-1787) GN=ispD PE=3 SV=1
Length = 229
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 116/214 (54%), Gaps = 4/214 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEET---KEKINVDL 57
M N KQ++ + G+PI Y+ F R + EI++V S + + K K N
Sbjct: 15 MKVNKNKQFILIQGKPILAYTIDKFQRSPLIDEIIIVAAESEINFCMQEIVYKYKFNKVK 74
Query: 58 KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
G ERQ SV +GL+ V ++ +V IHD ARP V +K ++ + A + G A GV
Sbjct: 75 NIVSGGSERQQSVMNGLKAVK-SANIVLIHDGARPFVDNKIIENGIKYAEKYGGAACGVQ 133
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 177
K TIK + + F +T+DR L+ +QTPQ K D + K +EG+ TDD I E
Sbjct: 134 PKDTIKIKSEDGFSEKTIDRSKLFCVQTPQCFKYDSILKAHINAEKEGILATDDTMIFEM 193
Query: 178 LKHPVYITEGSYTNIKVTTPDDLLIAERILNLSS 211
+ VY+ +GSY N+K+TTPDDL AE +L +S
Sbjct: 194 SGNKVYLYDGSYENLKITTPDDLYAAETLLKKNS 227
>sp|Q81J63|ISPD_BACCR 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ispD
PE=3 SV=1
Length = 226
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LK 58
MGA K +L + PI +++ F + K I++ + FEE +K ++ ++
Sbjct: 15 MGAGKNKLFLLIDEVPIIVHTLRAFEKDKACKSIIMAINEEERPYFEELMQKYQIEKHVQ 74
Query: 59 FSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPA 118
F G ERQDSVY+ LQ E V +HD ARP V +K ++ VL A + GA++ VP
Sbjct: 75 FIQGGAERQDSVYNALQYAS-GVEYVLVHDGARPFVTNKVIRDVLTAAEKYGASICAVPV 133
Query: 119 KATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL 178
K T+K+ + VV T++R L +QTPQ LL + + TDD S+VE +
Sbjct: 134 KDTVKKVE-QGVVVETVERSQLNAVQTPQGFSVSLLLEAHRSAKQSCFLGTDDASLVERV 192
Query: 179 KHPVYITEGSYTNIKVTTPDDLLIAERILNL 209
V + EGSY NIKVTTP+DLLIAE L +
Sbjct: 193 GKQVGVVEGSYYNIKVTTPEDLLIAESFLRV 223
>sp|Q3A8C6|ISPD_PELCD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
GN=ispD PE=3 SV=1
Length = 233
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 119/219 (54%), Gaps = 11/219 (5%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS 60
MGA++ KQYLPL +P+ ++ F R + I V+C + F + ++ F
Sbjct: 16 MGASVNKQYLPLGDRPVLSHTIALFDRHPGIDHIFVICPEAE---FPLCRREVIDPYDFR 72
Query: 61 ------LPGKERQDSVYSGLQEVDF-NSELVCIHDSARPLVLSKDVQKVLMDALRVGAAV 113
G ERQDSV +GLQ ++V IHD ARPL+ ++ + A + GAA+
Sbjct: 73 KVRGLVAGGAERQDSVRNGLQACQAAEGDIVLIHDGARPLLPPALIEPTVAAAQQCGAAI 132
Query: 114 LGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVS 173
+GVP K TIK ++ + T DR LW+ QTPQ + L++ ++ + TDD S
Sbjct: 133 VGVPVKDTIKLV-TDGMIDSTPDRSLLWQAQTPQAFRFGLIRDAHAQALQQHHKGTDDAS 191
Query: 174 IVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSE 212
++E L V + EGSY NIK+TTP+DL++A+ L+ +
Sbjct: 192 LIEWLGGRVAMIEGSYRNIKITTPEDLVLAQAFLDTPGD 230
>sp|A6LPN9|ISPD_CLOB8 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB
8052) GN=ispD PE=3 SV=1
Length = 226
Score = 127 bits (320), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 116/207 (56%), Gaps = 5/207 (2%)
Query: 1 MGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE---TKEKINVDL 57
MG KQY+ L G PI Y+ F + +I++V D + K + +D
Sbjct: 15 MGNIQSKQYIDLNGAPILYYTLKQFIENDLIDKIILVVPEDEKDYCKREVLNKYGLKIDD 74
Query: 58 KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 117
S G ERQ+SVY+ L++++ S++V IHD ARP V K + + A R AA GV
Sbjct: 75 LVS-GGNERQESVYNALEKLE-KSDIVLIHDGARPFVSQKIINYAVEYAKRYKAAAPGVM 132
Query: 118 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 177
K TIK +S +F V TL R L +QTPQ +L+ + + + + + VTDD S+VE
Sbjct: 133 PKDTIKIKDSNNFSVDTLVRSELVAIQTPQAFDFNLIYECHKEIKKRCISVTDDTSVVEL 192
Query: 178 LKHPVYITEGSYTNIKVTTPDDLLIAE 204
L H VYI EG Y NIK+TTP+DL++AE
Sbjct: 193 LGHKVYIYEGDYKNIKITTPEDLILAE 219
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,599,807
Number of Sequences: 539616
Number of extensions: 3080954
Number of successful extensions: 10202
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 8819
Number of HSP's gapped (non-prelim): 522
length of query: 214
length of database: 191,569,459
effective HSP length: 113
effective length of query: 101
effective length of database: 130,592,851
effective search space: 13189877951
effective search space used: 13189877951
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)