Your job contains 1 sequence.
>028086
MALCLSRSFSSYSQLHLSSLLSRCKPNFTSPNYPHKLPKSTNLPLVHHQNQICSSSYSMD
APPEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQNEDPKVAALRELKEETGVSSAEV
LAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFG
EWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028086
(214 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2075840 - symbol:NUDX26 "AT3G10620" species:37... 719 4.8e-71 1
TAIR|locus:2164220 - symbol:NUDX27 "AT5G06340" species:37... 552 2.4e-53 1
TAIR|locus:2202487 - symbol:NUDX25 "AT1G30110" species:37... 491 6.9e-47 1
TIGR_CMR|SPO_3585 - symbol:SPO_3585 "hydrolase, NUDIX fam... 326 2.1e-29 1
TIGR_CMR|CBU_1551 - symbol:CBU_1551 "MutT/nudix family pr... 265 6.1e-23 1
UNIPROTKB|Q47Y27 - symbol:rppH "RNA pyrophosphohydrolase"... 241 2.1e-20 1
TIGR_CMR|CPS_3625 - symbol:CPS_3625 "(di)nucleoside polyp... 241 2.1e-20 1
TIGR_CMR|CJE_0684 - symbol:CJE_0684 "(di)nucleoside polyp... 233 1.5e-19 1
UNIPROTKB|Q9KU53 - symbol:rppH "RNA pyrophosphohydrolase"... 223 1.7e-18 1
TIGR_CMR|VC_0671 - symbol:VC_0671 "MutT/nudix family prot... 223 1.7e-18 1
UNIPROTKB|P0A776 - symbol:rppH species:83333 "Escherichia... 215 1.2e-17 1
TIGR_CMR|SO_1331 - symbol:SO_1331 "MutT/nudix family prot... 206 1.1e-16 1
DICTYBASE|DDB_G0290689 - symbol:DDB_G0290689 "dinucleosid... 122 1.2e-06 1
DICTYBASE|DDB_G0286883 - symbol:DDB_G0286883 "dinucleosid... 120 3.6e-06 1
UNIPROTKB|P0AFC0 - symbol:nudB "dihydroneopterin triphosp... 102 0.00021 1
>TAIR|locus:2075840 [details] [associations]
symbol:NUDX26 "AT3G10620" species:3702 "Arabidopsis
thaliana" [GO:0004081 "bis(5'-nucleosyl)-tetraphosphatase
(asymmetrical) activity" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0034432 "bis(5'-adenosyl)-pentaphosphatase
activity" evidence=IDA] [GO:0019243 "methylglyoxal catabolic
process to D-lactate" evidence=RCA] [GO:0006753 "nucleoside
phosphate metabolic process" evidence=IDA] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IDA] InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
eggNOG:COG0494 Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502
SUPFAM:SSF55811 EMBL:AC011560 EMBL:AC013428 GO:GO:0004081
GO:GO:0034432 HOGENOM:HOG000066722 InterPro:IPR022927 EMBL:AF370187
EMBL:AY059145 IPI:IPI00542208 RefSeq:NP_187673.1 UniGene:At.19953
UniGene:At.69665 ProteinModelPortal:Q9CAF2 SMR:Q9CAF2 STRING:Q9CAF2
PaxDb:Q9CAF2 PRIDE:Q9CAF2 EnsemblPlants:AT3G10620.1 GeneID:820231
KEGG:ath:AT3G10620 TAIR:At3g10620 InParanoid:Q9CAF2 OMA:PEHVQIL
PhylomeDB:Q9CAF2 ProtClustDB:CLSN2913371 ArrayExpress:Q9CAF2
Genevestigator:Q9CAF2 Uniprot:Q9CAF2
Length = 216
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 133/194 (68%), Positives = 159/194 (81%)
Query: 32 NYPHKLPKSTNLPLVHH--QNQICSSSY----SMDAPPEGYRRNVGICLINSSKKIFAAS 85
NYP K K ++LP +H ++++ SSS SM++PPEGYRRNVG+CL+NSSKKIF AS
Sbjct: 23 NYPSKPIKFSSLPFLHRCRKSRVSSSSARCCSSMESPPEGYRRNVGVCLMNSSKKIFTAS 82
Query: 86 RLDIPDSWQMPQN-----EDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVREKL 140
RLDIP +WQMPQ EDP+VA +RELKEETGV SAE+LAE P+W+TYDFPP+VREKL
Sbjct: 83 RLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWITYDFPPDVREKL 142
Query: 141 KHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKP 200
K +WG DWKGQAQKWFLLKFTGK+EEINLLGD +EKPEFGEW W SP+Q++E AV+FKKP
Sbjct: 143 KVRWGSDWKGQAQKWFLLKFTGKDEEINLLGDGTEKPEFGEWSWTSPDQVVENAVEFKKP 202
Query: 201 VYKEVFTVFTPHLQ 214
VYKEV + F HLQ
Sbjct: 203 VYKEVMSAFASHLQ 216
>TAIR|locus:2164220 [details] [associations]
symbol:NUDX27 "AT5G06340" species:3702 "Arabidopsis
thaliana" [GO:0004081 "bis(5'-nucleosyl)-tetraphosphatase
(asymmetrical) activity" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0034432 "bis(5'-adenosyl)-pentaphosphatase activity"
evidence=IDA] [GO:0019243 "methylglyoxal catabolic process to
D-lactate" evidence=RCA] InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0046872
eggNOG:COG0494 Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502
SUPFAM:SSF55811 EMBL:AB006700 GO:GO:0034432 HOGENOM:HOG000066722
InterPro:IPR022927 EMBL:AF372941 EMBL:AY113163 IPI:IPI00534536
RefSeq:NP_196252.1 UniGene:At.7280 ProteinModelPortal:Q9FNH4
SMR:Q9FNH4 STRING:Q9FNH4 EnsemblPlants:AT5G06340.1 GeneID:830522
KEGG:ath:AT5G06340 TAIR:At5g06340 InParanoid:Q9FNH4 OMA:GKVWVGR
PhylomeDB:Q9FNH4 ProtClustDB:CLSN2916502 Genevestigator:Q9FNH4
Uniprot:Q9FNH4
Length = 227
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 103/178 (57%), Positives = 132/178 (74%)
Query: 40 STNLPLVHHQNQICSSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQN- 98
S+ PLV + S + ++++PP GYR+NVGICL++ +KIF AS++ IPD+WQMPQ
Sbjct: 36 SSPKPLVVLSVALSSPARTVESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQGG 95
Query: 99 ----EDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQK 154
ED + AA REL+EETGV+SAE +AE+P WLTYDFP EV++KL +W +KGQAQK
Sbjct: 96 ADEGEDLRNAAFRELREETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQK 155
Query: 155 WFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPH 212
WFL KFTGKEEEINLLGD + KPEF W WM PEQ++E AV FK+PVY+ V F P+
Sbjct: 156 WFLFKFTGKEEEINLLGDGTAKPEFKVWSWMLPEQVIEHAVYFKRPVYEHVIKQFNPY 213
>TAIR|locus:2202487 [details] [associations]
symbol:NUDX25 "AT1G30110" species:3702 "Arabidopsis
thaliana" [GO:0004081 "bis(5'-nucleosyl)-tetraphosphatase
(asymmetrical) activity" evidence=ISS;IDA] [GO:0009507
"chloroplast" evidence=ISM] [GO:0015967 "diadenosine tetraphosphate
catabolic process" evidence=IDA] [GO:0006857 "oligopeptide
transport" evidence=RCA] [GO:0019243 "methylglyoxal catabolic
process to D-lactate" evidence=RCA] [GO:0006753 "nucleoside
phosphate metabolic process" evidence=IDA] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IDA] InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
eggNOG:COG0494 Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502
SUPFAM:SSF55811 GO:GO:0004081 GO:GO:0015967 EMBL:AC074176
EMBL:AY087445 EMBL:BT025530 EMBL:AK229734 IPI:IPI00540816
PIR:B86425 RefSeq:NP_001185114.1 RefSeq:NP_174303.1
UniGene:At.43787 HSSP:P08337 ProteinModelPortal:Q9C6Z2 SMR:Q9C6Z2
PaxDb:Q9C6Z2 PRIDE:Q9C6Z2 EnsemblPlants:AT1G30110.1
EnsemblPlants:AT1G30110.2 GeneID:839890 KEGG:ath:AT1G30110
TAIR:At1g30110 HOGENOM:HOG000066722 InParanoid:Q9C6Z2 OMA:GNSEYDG
PhylomeDB:Q9C6Z2 ProtClustDB:CLSN2682056 Genevestigator:Q9C6Z2
InterPro:IPR022927 Uniprot:Q9C6Z2
Length = 175
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 88/158 (55%), Positives = 117/158 (74%)
Query: 59 MDAPPEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQN-----EDPKVAALRELKEET 113
M+ P GYR NVG+CLINS +F ASRL++P +WQMPQ EDPK AA+REL+EET
Sbjct: 1 MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60
Query: 114 GVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEE--INLLG 171
GV SAE+++EVP WLTYDFPP V+ K+ WGG+W GQAQKW+L++ E+E INL
Sbjct: 61 GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWYLVRLRNDEDEKEINLAN 120
Query: 172 DKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
++++ EF EWKW PE+++E+AVD+K+P Y+EV F
Sbjct: 121 NEADS-EFAEWKWAKPEEVVEQAVDYKRPTYEEVIKTF 157
>TIGR_CMR|SPO_3585 [details] [associations]
symbol:SPO_3585 "hydrolase, NUDIX family, NudH subfamily"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] HAMAP:MF_00298 InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:CP000031 GenomeReviews:CP000031_GR eggNOG:COG0494
Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811
GO:GO:0016787 HOGENOM:HOG000066722 OMA:GNSEYDG InterPro:IPR022927
KO:K08311 RefSeq:YP_168780.1 ProteinModelPortal:Q5LMH8
GeneID:3195400 KEGG:sil:SPO3585 PATRIC:23380647
ProtClustDB:CLSK759298 Uniprot:Q5LMH8
Length = 161
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 66/156 (42%), Positives = 97/156 (62%)
Query: 66 YRRNVGICLINSSKKIFAASRLDI-PDSWQMPQ-----NEDPKVAALRELKEETGVSS-- 117
YR VG+ L+N +F R+D D+WQMPQ +EDP AALREL EETGV++
Sbjct: 11 YRPCVGVVLMNGDGFVFVGQRMDQNTDAWQMPQGGVDEDEDPFEAALRELWEETGVTADL 70
Query: 118 AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKP 177
E++AE WL YD P ++ ++ W G ++GQ QKW+L +F G++++I+L ++ P
Sbjct: 71 VEMVAETDGWLPYDLPHDLVPRI---WKGRYRGQEQKWYLFRFLGRDDQIDL---ETGHP 124
Query: 178 EFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 213
EF WKW P++++ V FK+ VY+ V F PHL
Sbjct: 125 EFSRWKWQDPDRLVAEIVPFKRDVYERVVAAFAPHL 160
>TIGR_CMR|CBU_1551 [details] [associations]
symbol:CBU_1551 "MutT/nudix family protein" species:227377
"Coxiella burnetii RSA 493" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=ISS] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=ISS] HAMAP:MF_00298 InterPro:IPR000086
InterPro:IPR015797 InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893
PROSITE:PS51462 eggNOG:COG0494 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0016787 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR022927 OMA:PEHVQIL KO:K08311 ProtClustDB:PRK00714
HOGENOM:HOG000066723 RefSeq:NP_820534.1 ProteinModelPortal:Q83BF8
GeneID:1209461 KEGG:cbu:CBU_1551 PATRIC:17931865
BioCyc:CBUR227377:GJ7S-1531-MONOMER Uniprot:Q83BF8
Length = 228
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 59/157 (37%), Positives = 91/157 (57%)
Query: 65 GYRRNVGICLINSSKKIFAASRLDIPDSWQMPQ-----NEDPKVAALRELKEETGVSSAE 119
G+R VG+ ++N ++ R+ PD+WQ PQ NE + A REL EE G+S +
Sbjct: 76 GFRLGVGMVIMNRQGELLWGRRVGNPDAWQFPQGGLLPNETLREALNRELDEEVGLSPHD 135
Query: 120 V--LAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKP 177
V L E W++Y P + R +H+ G GQ QKWFLL+FTGK++ I+L D +P
Sbjct: 136 VIYLRETRQWISYRLPKKFRRP-EHR-GPVCIGQRQKWFLLQFTGKDDAISL--DHCSQP 191
Query: 178 EFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
EF +W+W+ ++ V+FK+ VY++V T F ++
Sbjct: 192 EFDQWRWVDYWYPVDHVVEFKRDVYQKVLTEFAEFIR 228
>UNIPROTKB|Q47Y27 [details] [associations]
symbol:rppH "RNA pyrophosphohydrolase" species:167879
"Colwellia psychrerythraea 34H" [GO:0015961 "diadenosine
polyphosphate catabolic process" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=ISS] HAMAP:MF_00298
InterPro:IPR000086 InterPro:IPR015797 InterPro:IPR020084
Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462 eggNOG:COG0494
Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811
GO:GO:0016787 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0015961
InterPro:IPR022927 OMA:PEHVQIL KO:K08311 ProtClustDB:PRK00714
RefSeq:YP_270293.1 ProteinModelPortal:Q47Y27 STRING:Q47Y27
GeneID:3522053 KEGG:cps:CPS_3625 PATRIC:21470177
HOGENOM:HOG000066723 BioCyc:CPSY167879:GI48-3647-MONOMER
Uniprot:Q47Y27
Length = 171
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 58/153 (37%), Positives = 79/153 (51%)
Query: 64 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQN-----EDPKVAALRELKEETGVSS- 117
EGYR NVGI +IN ++F A R SWQ PQ E + REL EE G+
Sbjct: 5 EGYRANVGIVIINDMGQVFWARRYG-QHSWQYPQGGVDEGETAEQTMYRELHEEVGLKPE 63
Query: 118 -AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEK 176
+++A +WL Y P + ++H GQ QKWFLLK T E ++LL S
Sbjct: 64 HVKIVASTKHWLKYKLP---KRYIRHDSKPVCIGQKQKWFLLKLTAAESSVDLL--HSSH 118
Query: 177 PEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
PEF +W+W+S + + V FK+ VY+ V F
Sbjct: 119 PEFDDWRWVSYWYPVRQVVSFKRDVYRMVMKEF 151
>TIGR_CMR|CPS_3625 [details] [associations]
symbol:CPS_3625 "(di)nucleoside polyphosphate hydrolase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0015961
"diadenosine polyphosphate catabolic process" evidence=ISS]
[GO:0016787 "hydrolase activity" evidence=ISS] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=ISS] HAMAP:MF_00298
InterPro:IPR000086 InterPro:IPR015797 InterPro:IPR020084
Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462 eggNOG:COG0494
Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811
GO:GO:0016787 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0015961
InterPro:IPR022927 OMA:PEHVQIL KO:K08311 ProtClustDB:PRK00714
RefSeq:YP_270293.1 ProteinModelPortal:Q47Y27 STRING:Q47Y27
GeneID:3522053 KEGG:cps:CPS_3625 PATRIC:21470177
HOGENOM:HOG000066723 BioCyc:CPSY167879:GI48-3647-MONOMER
Uniprot:Q47Y27
Length = 171
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 58/153 (37%), Positives = 79/153 (51%)
Query: 64 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQN-----EDPKVAALRELKEETGVSS- 117
EGYR NVGI +IN ++F A R SWQ PQ E + REL EE G+
Sbjct: 5 EGYRANVGIVIINDMGQVFWARRYG-QHSWQYPQGGVDEGETAEQTMYRELHEEVGLKPE 63
Query: 118 -AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEK 176
+++A +WL Y P + ++H GQ QKWFLLK T E ++LL S
Sbjct: 64 HVKIVASTKHWLKYKLP---KRYIRHDSKPVCIGQKQKWFLLKLTAAESSVDLL--HSSH 118
Query: 177 PEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
PEF +W+W+S + + V FK+ VY+ V F
Sbjct: 119 PEFDDWRWVSYWYPVRQVVSFKRDVYRMVMKEF 151
>TIGR_CMR|CJE_0684 [details] [associations]
symbol:CJE_0684 "(di)nucleoside polyphosphate hydrolase"
species:195099 "Campylobacter jejuni RM1221" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=ISS] HAMAP:MF_00298
InterPro:IPR000086 InterPro:IPR015797 InterPro:IPR020084
Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462 eggNOG:COG0494
Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811
GO:GO:0016787 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000066722 InterPro:IPR022927 OMA:PEHVQIL
RefSeq:YP_178696.1 ProteinModelPortal:Q5HVI9 STRING:Q5HVI9
GeneID:3231994 KEGG:cjr:CJE0684 PATRIC:20043096 KO:K08311
ProtClustDB:PRK00714 BioCyc:CJEJ195099:GJC0-701-MONOMER
Uniprot:Q5HVI9
Length = 156
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 58/155 (37%), Positives = 86/155 (55%)
Query: 64 EGYRRNVGICLINSSK----KIFAASRLDIPDSWQMPQN-----EDPKVAALRELKEETG 114
+ YR NV +++SS KIF A R D+ + WQ PQ E K A RELKEE G
Sbjct: 5 KNYRPNVAAIVLSSSYPFECKIFIAKRSDMDNIWQFPQGGIDKGESVKNALFRELKEEIG 64
Query: 115 VSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKS 174
E++AE P WL+YDFP ++ +K+ + GQ QK+FL++ IN+ +
Sbjct: 65 TDEVEIIAEYPEWLSYDFPSKIVKKMY-----PYDGQIQKYFLVRLK-HGATINI---NT 115
Query: 175 EKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
+ PEF +++++S +QI E FKK +Y +V F
Sbjct: 116 KHPEFDDYQFVSVKQIFEMINHFKKNIYVKVIKYF 150
>UNIPROTKB|Q9KU53 [details] [associations]
symbol:rppH "RNA pyrophosphohydrolase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=ISS] HAMAP:MF_00298 InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
GO:GO:0003824 EMBL:AE003852 GenomeReviews:AE003852_GR
eggNOG:COG0494 GO:GO:0006281 Gene3D:3.90.79.10 InterPro:IPR020476
PRINTS:PR00502 SUPFAM:SSF55811 GO:GO:0016787 InterPro:IPR022927
OMA:PEHVQIL KO:K08311 ProtClustDB:PRK00714 PIR:G82294
RefSeq:NP_230320.1 ProteinModelPortal:Q9KU53 DNASU:2615460
GeneID:2615460 KEGG:vch:VC0671 PATRIC:20080459 Uniprot:Q9KU53
Length = 172
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 56/155 (36%), Positives = 78/155 (50%)
Query: 64 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQN-----EDPKVAALRELKEETGVSSA 118
+GYR NVGI + N+ ++F A R SWQ PQ E P+ A REL EE G++
Sbjct: 5 DGYRLNVGIVICNNHGQVFWAKRYG-QHSWQFPQGGIDDGESPEQAMFRELYEEVGLTKK 63
Query: 119 EV--LAEVPYWLTYDFPPEVREKLKHQWGGD--WKGQAQKWFLLKFTGKEEEINLLGDKS 174
+V +A +WL Y P K +W GQ QKWFLL+ E +IN+ +
Sbjct: 64 DVKVIATSRHWLRYKLP-----KRLVRWDSQPVCIGQKQKWFLLRLECDESKINM--QRG 116
Query: 175 EKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
PEF W+W+S + + V FK+ VY+ F
Sbjct: 117 SSPEFDGWRWVSYWYPVRQVVSFKRDVYRRAMKEF 151
>TIGR_CMR|VC_0671 [details] [associations]
symbol:VC_0671 "MutT/nudix family protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] HAMAP:MF_00298
InterPro:IPR000086 InterPro:IPR015797 InterPro:IPR020084
Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462 GO:GO:0003824
EMBL:AE003852 GenomeReviews:AE003852_GR eggNOG:COG0494
GO:GO:0006281 Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502
SUPFAM:SSF55811 GO:GO:0016787 InterPro:IPR022927 OMA:PEHVQIL
KO:K08311 ProtClustDB:PRK00714 PIR:G82294 RefSeq:NP_230320.1
ProteinModelPortal:Q9KU53 DNASU:2615460 GeneID:2615460
KEGG:vch:VC0671 PATRIC:20080459 Uniprot:Q9KU53
Length = 172
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 56/155 (36%), Positives = 78/155 (50%)
Query: 64 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQN-----EDPKVAALRELKEETGVSSA 118
+GYR NVGI + N+ ++F A R SWQ PQ E P+ A REL EE G++
Sbjct: 5 DGYRLNVGIVICNNHGQVFWAKRYG-QHSWQFPQGGIDDGESPEQAMFRELYEEVGLTKK 63
Query: 119 EV--LAEVPYWLTYDFPPEVREKLKHQWGGD--WKGQAQKWFLLKFTGKEEEINLLGDKS 174
+V +A +WL Y P K +W GQ QKWFLL+ E +IN+ +
Sbjct: 64 DVKVIATSRHWLRYKLP-----KRLVRWDSQPVCIGQKQKWFLLRLECDESKINM--QRG 116
Query: 175 EKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
PEF W+W+S + + V FK+ VY+ F
Sbjct: 117 SSPEFDGWRWVSYWYPVRQVVSFKRDVYRRAMKEF 151
>UNIPROTKB|P0A776 [details] [associations]
symbol:rppH species:83333 "Escherichia coli K-12"
[GO:0050779 "RNA destabilization" evidence=IMP] [GO:0034353 "RNA
pyrophosphohydrolase activity" evidence=IDA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IDA] [GO:0006402 "mRNA catabolic process"
evidence=IMP] HAMAP:MF_00298 InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG0494 Gene3D:3.90.79.10
InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811 EMBL:U29581
GO:GO:0006402 InterPro:IPR022927 OMA:PEHVQIL KO:K08311
ProtClustDB:PRK00714 HOGENOM:HOG000066723 PIR:G65065
RefSeq:NP_417307.1 RefSeq:YP_491035.1 PDB:2KDV PDB:2KDW PDBsum:2KDV
PDBsum:2KDW ProteinModelPortal:P0A776 SMR:P0A776 DIP:DIP-47855N
IntAct:P0A776 PRIDE:P0A776 EnsemblBacteria:EBESCT00000000762
EnsemblBacteria:EBESCT00000018382 GeneID:12934210 GeneID:947300
KEGG:ecj:Y75_p2764 KEGG:eco:b2830 PATRIC:32121078 EchoBASE:EB2896
EcoGene:EG13091 BioCyc:EcoCyc:G7459-MONOMER
BioCyc:ECOL316407:JW2798-MONOMER BioCyc:MetaCyc:G7459-MONOMER
EvolutionaryTrace:P0A776 Genevestigator:P0A776 GO:GO:0034353
GO:GO:0050779 Uniprot:P0A776
Length = 176
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 60/157 (38%), Positives = 77/157 (49%)
Query: 64 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQN-----EDPKVAALRELKEETGVSSA 118
+GYR NVGI + N ++ A R SWQ PQ E + A REL EE G+S
Sbjct: 5 DGYRPNVGIVICNRQGQVMWARRFG-QHSWQFPQGGINPGESAEQAMYRELFEEVGLSRK 63
Query: 119 EV--LAEVPYWLTYDFPPEVREKLKHQWGGDWK----GQAQKWFLLKFTGKEEEINLLGD 172
+V LA WL Y P K +W D K GQ QKWFLL+ + EIN+
Sbjct: 64 DVRILASTRNWLRYKLP-----KRLVRW--DTKPVCIGQKQKWFLLQLVSGDAEINM--Q 114
Query: 173 KSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
S PEF W+W+S + + V FK+ VY+ V F
Sbjct: 115 TSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEF 151
>TIGR_CMR|SO_1331 [details] [associations]
symbol:SO_1331 "MutT/nudix family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=ISS] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=ISS] HAMAP:MF_00298 InterPro:IPR000086
InterPro:IPR015797 InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893
PROSITE:PS51462 eggNOG:COG0494 Gene3D:3.90.79.10 InterPro:IPR020476
PRINTS:PR00502 SUPFAM:SSF55811 GO:GO:0016787 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR022927 OMA:PEHVQIL KO:K08311
ProtClustDB:PRK00714 HOGENOM:HOG000066723 RefSeq:NP_716951.1
ProteinModelPortal:Q8EH98 GeneID:1169152 KEGG:son:SO_1331
PATRIC:23522318 Uniprot:Q8EH98
Length = 174
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 56/154 (36%), Positives = 75/154 (48%)
Query: 64 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQN-----EDPKVAALRELKEETGV--S 116
+G+R NVGI + N ++ A R SWQ PQ E + A REL EE G+
Sbjct: 5 DGFRANVGIIICNRYGQVMWARRFG-QHSWQFPQGGVDDGESAEEAMYRELYEEVGLRPE 63
Query: 117 SAEVLAEVPYWLTYDFPPE-VREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSE 175
VL WL Y P VR+ K GQ QKWFLL+ ++ INL S
Sbjct: 64 HVTVLTSTRSWLRYRLPKRLVRQDSKPVC----IGQKQKWFLLQLKSQDSAINL--SSSG 117
Query: 176 KPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
PEF +W+W+S + + V FK+ VY++V F
Sbjct: 118 HPEFDDWRWVSYWYPVRQVVSFKRDVYRKVMKEF 151
>DICTYBASE|DDB_G0290689 [details] [associations]
symbol:DDB_G0290689 "dinucleoside polyphosphate
hydrolase" species:44689 "Dictyostelium discoideum" [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000086
InterPro:IPR015797 Pfam:PF00293 PROSITE:PS51462
dictyBase:DDB_G0290689 eggNOG:COG0494 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0016787 EMBL:AAFI02000166 RefSeq:XP_635597.1
ProteinModelPortal:Q54FR0 EnsemblProtists:DDB0266800 GeneID:8627778
KEGG:ddi:DDB_G0290689 OMA:VEKNEDY ProtClustDB:CLSZ2429647
Uniprot:Q54FR0
Length = 183
Score = 122 (48.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/162 (30%), Positives = 68/162 (41%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPDS----WQMPQ-------NEDPKVAALRELKEETG 114
YR VG + N + ++ R + WQ PQ NED VA RE+KEE G
Sbjct: 6 YRSCVGALIFNQNNQVLICKRSSKKKTAVGKWQFPQGGVEVEKNEDYYVAVQREIKEEVG 65
Query: 115 VS-SAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKE-EEINLLGD 172
+ S + L V L + K + GG GQ W+L + +NL +
Sbjct: 66 LEPSIDTLKYVSK-LQNPLSYIYEDSPKSRSGGHI-GQMIHWYLFYLPNDLIKTVNL--N 121
Query: 173 KSEKPEFGEWKWMSPEQIL---ERAVDFKKPVYKEVFTVFTP 211
E+PEF E KW E+ + E V FKK + +F P
Sbjct: 122 VEEEPEFEECKWFGFEEFINNNEMIVPFKKDMLHSLFLESQP 163
>DICTYBASE|DDB_G0286883 [details] [associations]
symbol:DDB_G0286883 "dinucleoside polyphosphate
hydrolase" species:44689 "Dictyostelium discoideum" [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000086
InterPro:IPR015797 Pfam:PF00293 PROSITE:PS51462
dictyBase:DDB_G0286883 eggNOG:COG0494 Gene3D:3.90.79.10
InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811 GO:GO:0016787
EMBL:AAFI02000091 ProtClustDB:CLSZ2429647 RefSeq:XP_637504.1
ProteinModelPortal:Q54L59 EnsemblProtists:DDB0266799 GeneID:8625843
KEGG:ddi:DDB_G0286883 OMA:RINISDT Uniprot:Q54L59
Length = 190
Score = 120 (47.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 49/178 (27%), Positives = 76/178 (42%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPDS----WQMPQ-------NEDPKVAALRELKEETG 114
YR VG + N ++ R + WQ PQ +ED VA LRE+KEE G
Sbjct: 6 YRSCVGALIFNDQGQVLVCKRASKKKTAVGKWQFPQGGVEAGRDEDYYVAVLREIKEEVG 65
Query: 115 VSSAE------VLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEIN 168
+ + E P Y++ + + + + + GQ W L F K+ I+
Sbjct: 66 LEVTDDKLRFVSKIEEPLSYLYEYKNSITKAIGKVFNHN--GQMIHWHLF-FLPKDL-IS 121
Query: 169 LLG-DKSEKPEFGEWKWMSPEQILERA-----------VDFKKPVYKEVFTVFTPHLQ 214
L+ EKPEF E KW + + L + V FKK +YK++ T+ P ++
Sbjct: 122 LIDLGFEEKPEFDECKWFNFDDFLNQEEQPNNNDQTLPVPFKKEMYKQLLTLSNPIIE 179
>UNIPROTKB|P0AFC0 [details] [associations]
symbol:nudB "dihydroneopterin triphosphate
pyrophosphohydrolase" species:83333 "Escherichia coli K-12"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=IDA] [GO:0008828 "dATP pyrophosphohydrolase
activity" evidence=IEA;IDA] [GO:0046654 "tetrahydrofolate
biosynthetic process" evidence=IMP] [GO:0046656 "folic acid
biosynthetic process" evidence=IEA;IMP] [GO:0019177
"dihydroneopterin triphosphate pyrophosphohydrolase activity"
evidence=IDA] InterPro:IPR000086 InterPro:IPR003564
InterPro:IPR015797 InterPro:IPR020084 Pfam:PF00293 PRINTS:PR01404
PROSITE:PS00893 PROSITE:PS51462 GO:GO:0000287 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
eggNOG:COG0494 GO:GO:0006281 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0046654 GO:GO:0046656 GO:GO:0008828 EMBL:X59551 EMBL:D10165
PIR:B38113 RefSeq:NP_416379.1 RefSeq:YP_490127.1 PDB:2O1C PDB:2O5W
PDBsum:2O1C PDBsum:2O5W ProteinModelPortal:P0AFC0 SMR:P0AFC0
IntAct:P0AFC0 EnsemblBacteria:EBESCT00000002268
EnsemblBacteria:EBESCT00000015656 GeneID:12931354 GeneID:946383
KEGG:ecj:Y75_p1841 KEGG:eco:b1865 PATRIC:32119053 EchoBASE:EB1128
EcoGene:EG11138 HOGENOM:HOG000264405 KO:K08310 OMA:PGFWQSV
ProtClustDB:PRK09438
BioCyc:EcoCyc:H2NEOPTERINP3PYROPHOSPHOHYDRO-MONOMER
BioCyc:ECOL316407:JW1854-MONOMER
BioCyc:MetaCyc:H2NEOPTERINP3PYROPHOSPHOHYDRO-MONOMER
EvolutionaryTrace:P0AFC0 Genevestigator:P0AFC0 GO:GO:0019177
Uniprot:P0AFC0
Length = 150
Score = 102 (41.0 bits), Expect = 0.00021, P = 0.00021
Identities = 30/102 (29%), Positives = 48/102 (47%)
Query: 66 YRRNVGICLI---NSSKKIFAASRLDIPDSWQ-----MPQNEDPKVAALRELKEETGVSS 117
Y+R V I ++ +K++ R D PD WQ + + E AA+RE+KEE +
Sbjct: 6 YKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDV 65
Query: 118 -AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLL 158
AE L + T +F E+ L+H++ + WF L
Sbjct: 66 VAEQLTLIDCQRTVEF--EIFSHLRHRYAPGVTRNTESWFCL 105
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 214 194 0.00076 111 3 11 22 0.37 33
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 613 (65 KB)
Total size of DFA: 200 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.57u 0.10s 19.67t Elapsed: 00:00:01
Total cpu time: 19.57u 0.10s 19.67t Elapsed: 00:00:01
Start: Mon May 20 15:05:05 2013 End: Mon May 20 15:05:06 2013