BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028086
(214 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CAF2|NUD26_ARATH Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana GN=NUDT26
PE=1 SV=1
Length = 216
Score = 269 bits (688), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 130/194 (67%), Positives = 153/194 (78%), Gaps = 11/194 (5%)
Query: 32 NYPHKLPKSTNLPLVHHQNQ------ICSSSYSMDAPPEGYRRNVGICLINSSKKIFAAS 85
NYP K K ++LP +H + SM++PPEGYRRNVG+CL+NSSKKIF AS
Sbjct: 23 NYPSKPIKFSSLPFLHRCRKSRVSSSSARCCSSMESPPEGYRRNVGVCLMNSSKKIFTAS 82
Query: 86 RLDIPDSWQMPQN-----EDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVREKL 140
RLDIP +WQMPQ EDP+VA +RELKEETGV SAE+LAE P+W+TYDFPP+VREKL
Sbjct: 83 RLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWITYDFPPDVREKL 142
Query: 141 KHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKP 200
K +WG DWKGQAQKWFLLKFTGK+EEINLLGD +EKPEFGEW W SP+Q++E AV+FKKP
Sbjct: 143 KVRWGSDWKGQAQKWFLLKFTGKDEEINLLGDGTEKPEFGEWSWTSPDQVVENAVEFKKP 202
Query: 201 VYKEVFTVFTPHLQ 214
VYKEV + F HLQ
Sbjct: 203 VYKEVMSAFASHLQ 216
>sp|Q9FNH4|NUD27_ARATH Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana GN=NUDT27
PE=1 SV=1
Length = 227
Score = 217 bits (552), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 130/175 (74%), Gaps = 5/175 (2%)
Query: 44 PLVHHQNQICSSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQN----- 98
PLV + S + ++++PP GYR+NVGICL++ +KIF AS++ IPD+WQMPQ
Sbjct: 40 PLVVLSVALSSPARTVESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQGGADEG 99
Query: 99 EDPKVAALRELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLL 158
ED + AA REL+EETGV+SAE +AE+P WLTYDFP EV++KL +W +KGQAQKWFL
Sbjct: 100 EDLRNAAFRELREETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQKWFLF 159
Query: 159 KFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 213
KFTGKEEEINLLGD + KPEF W WM PEQ++E AV FK+PVY+ V F P+
Sbjct: 160 KFTGKEEEINLLGDGTAKPEFKVWSWMLPEQVIEHAVYFKRPVYEHVIKQFNPYF 214
>sp|Q9C6Z2|NUD25_ARATH Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1
Length = 175
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 118/163 (72%), Gaps = 8/163 (4%)
Query: 59 MDAPPEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQN-----EDPKVAALRELKEET 113
M+ P GYR NVG+CLINS +F ASRL++P +WQMPQ EDPK AA+REL+EET
Sbjct: 1 MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60
Query: 114 GVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEE--EINLLG 171
GV SAE+++EVP WLTYDFPP V+ K+ WGG+W GQAQKW+L++ E+ EINL
Sbjct: 61 GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWYLVRLRNDEDEKEINLAN 120
Query: 172 DKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
++++ EF EWKW PE+++E+AVD+K+P Y+EV F L
Sbjct: 121 NEADS-EFAEWKWAKPEEVVEQAVDYKRPTYEEVIKTFGSFLN 162
>sp|Q2RV14|RPPH_RHORT RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=rppH PE=3 SV=1
Length = 165
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 95/145 (65%), Gaps = 11/145 (7%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPDSWQMPQ-----NEDPKVAALRELKEETGVSSAEV 120
YR+ VGI LIN+ ++F A RLD P++WQMPQ EDP+ AA RE++EE G +A +
Sbjct: 14 YRQGVGIMLINARGQVFVARRLDSPEAWQMPQGGIDAGEDPETAAWREMEEEIGTRNALL 73
Query: 121 LAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFG 180
L E WL YD P E+R +L WGG ++GQ QKWF +FTG++ +INL + PEF
Sbjct: 74 LGETAGWLGYDLPEELRGRL---WGGRFQGQRQKWFAFRFTGQDADINL---ATAHPEFD 127
Query: 181 EWKWMSPEQILERAVDFKKPVYKEV 205
W+W+ + ++ V FK+PVY++V
Sbjct: 128 AWRWVDVDTLVALIVPFKRPVYEQV 152
>sp|A8LKJ8|RPPH_DINSH RNA pyrophosphohydrolase OS=Dinoroseobacter shibae (strain DFL 12)
GN=rppH PE=3 SV=1
Length = 160
Score = 133 bits (334), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 101/157 (64%), Gaps = 16/157 (10%)
Query: 66 YRRNVGICLINSSKKIFAASRLD--IPDSWQMPQN-----EDPKVAALRELKEETGVS-- 116
YR+ VG+ L + + ++F R D +P +WQMPQ ED + AALREL EETGV+
Sbjct: 11 YRKCVGVVLWDGAGRVFTGQRYDSELP-AWQMPQGGIEDGEDARTAALRELVEETGVAVE 69
Query: 117 SAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEK 176
EVLAE P W+ YD PPE+ ++ W G +KGQAQ+W L+KF G + +IN+ +++
Sbjct: 70 KVEVLAETPDWIKYDLPPEIVPRI---WKGRYKGQAQRWVLMKFLGSDADINI---ETKH 123
Query: 177 PEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 213
PEF EW+W+ P +L+ V FK+ VY++VF F+ L
Sbjct: 124 PEFSEWRWLEPASVLDSIVPFKRDVYEQVFDAFSDWL 160
>sp|A4WWV6|RPPH_RHOS5 RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=rppH PE=3 SV=1
Length = 162
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 97/156 (62%), Gaps = 14/156 (8%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIP-DSWQMPQ-----NEDPKVAALRELKEETGVSS-- 117
YR VGI LIN IFA R+D P +WQMPQ +E P+ AALREL+EETG+
Sbjct: 12 YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDADEKPRQAALRELQEETGIPEDL 71
Query: 118 AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKP 177
E +A+ P W+TYD PP++ L WGG ++GQ QKWFL ++ G +E+I G +E
Sbjct: 72 VEFVAKAPEWVTYDLPPDL---LGRVWGGKYRGQRQKWFLFRYLGTDEQI---GIATEHA 125
Query: 178 EFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 213
EF W+W+ E+++ V FK+PVY+ V +F HL
Sbjct: 126 EFSCWRWIGAEEMVASIVPFKRPVYERVVAMFREHL 161
>sp|B9KN59|RPPH_RHOSK RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain KD131 /
KCTC 12085) GN=rppH PE=3 SV=1
Length = 162
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 96/156 (61%), Gaps = 14/156 (8%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIP-DSWQMPQN-----EDPKVAALRELKEETGVSS-- 117
YR VGI LIN IFA R+D P +WQMPQ E P+ AALREL EETG+ +
Sbjct: 12 YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAER 71
Query: 118 AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKP 177
E +A+ P W+TYD PPE+ L WGG ++GQ QKWFL ++ G +EE+ + D +
Sbjct: 72 VEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDEEVGIGTDHA--- 125
Query: 178 EFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 213
EF W+W+ E+++ V FK+ VY+EV F PHL
Sbjct: 126 EFSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161
>sp|Q3IZC1|RPPH_RHOS4 RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rppH PE=3 SV=1
Length = 162
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 96/156 (61%), Gaps = 14/156 (8%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIP-DSWQMPQN-----EDPKVAALRELKEETGVSS-- 117
YR VGI LIN IFA R+D P +WQMPQ E P+ AALREL EETG+ +
Sbjct: 12 YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAER 71
Query: 118 AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKP 177
E +A+ P W+TYD PPE+ L WGG ++GQ QKWFL ++ G +EE+ + D +
Sbjct: 72 VEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDEEVGIGTDHA--- 125
Query: 178 EFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 213
EF W+W+ E+++ V FK+ VY+EV F PHL
Sbjct: 126 EFSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161
>sp|A3PMX6|RPPH_RHOS1 RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=rppH PE=3 SV=1
Length = 162
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 96/156 (61%), Gaps = 14/156 (8%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIP-DSWQMPQN-----EDPKVAALRELKEETGVSS-- 117
YR VGI LIN IFA R+D P +WQMPQ E P+ AALREL EETG+ +
Sbjct: 12 YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAER 71
Query: 118 AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKP 177
E +A+ P W+TYD PPE+ L WGG ++GQ QKWFL ++ G ++E+ + D +E
Sbjct: 72 VEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDDEVGIGTDHAE-- 126
Query: 178 EFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 213
F W+W+ E+++ V FK+ VY+EV F PHL
Sbjct: 127 -FSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161
>sp|Q5FU29|RPPH_GLUOX RNA pyrophosphohydrolase OS=Gluconobacter oxydans (strain 621H)
GN=rppH PE=3 SV=1
Length = 170
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 90/147 (61%), Gaps = 11/147 (7%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIP-DSWQMPQN-----EDPKVAALRELKEETGVSSAE 119
YR NVGI L N K+F A R D+P D WQ PQ E P+VAALRE+ EE G +A
Sbjct: 9 YRPNVGIALFNRDGKLFIARRTDLPGDVWQCPQGGIDEGETPQVAALREMGEEIGTQNAR 68
Query: 120 VLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEF 179
+LAE WL+YD P ++ + GG ++GQ QKWF++ + G++ +I L D + PEF
Sbjct: 69 ILAERSGWLSYDLPSDL---IGKALGGRFRGQTQKWFVMGYEGQDSDIRL--DLQDPPEF 123
Query: 180 GEWKWMSPEQILERAVDFKKPVYKEVF 206
W+W+ P+ +L R + FKK +Y E+
Sbjct: 124 DAWEWVDPQAVLNRNLGFKKALYAELI 150
>sp|Q5LMH8|RPPH_RUEPO RNA pyrophosphohydrolase OS=Ruegeria pomeroyi (strain ATCC 700808 /
DSM 15171 / DSS-3) GN=rppH PE=3 SV=1
Length = 161
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 97/156 (62%), Gaps = 14/156 (8%)
Query: 66 YRRNVGICLINSSKKIFAASRLDI-PDSWQMPQ-----NEDPKVAALRELKEETGVSS-- 117
YR VG+ L+N +F R+D D+WQMPQ +EDP AALREL EETGV++
Sbjct: 11 YRPCVGVVLMNGDGFVFVGQRMDQNTDAWQMPQGGVDEDEDPFEAALRELWEETGVTADL 70
Query: 118 AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKP 177
E++AE WL YD P ++ ++ W G ++GQ QKW+L +F G++++I+L ++ P
Sbjct: 71 VEMVAETDGWLPYDLPHDLVPRI---WKGRYRGQEQKWYLFRFLGRDDQIDL---ETGHP 124
Query: 178 EFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 213
EF WKW P++++ V FK+ VY+ V F PHL
Sbjct: 125 EFSRWKWQDPDRLVAEIVPFKRDVYERVVAAFAPHL 160
>sp|A5FWY8|RPPH_ACICJ RNA pyrophosphohydrolase OS=Acidiphilium cryptum (strain JF-5)
GN=rppH PE=3 SV=1
Length = 164
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 89/154 (57%), Gaps = 15/154 (9%)
Query: 66 YRRNVGICLINSSKKIFAASRLDI-PDS---WQMPQ-----NEDPKVAALRELKEETGVS 116
YR NVG L + + KI A R D+ PD+ WQ+PQ +EDP A LREL EE G +
Sbjct: 9 YRSNVGAALFSRAGKILVARRADLGPDAAYQWQLPQGGIDGDEDPAAAVLRELDEEIGTT 68
Query: 117 SAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEK 176
+ E+L E+P WL+YDFPP+V K G +GQ Q+WF L+F G ++ I L D
Sbjct: 69 AVELLGEIPEWLSYDFPPDVVAKF----GARHRGQRQRWFALRFLGTDDMIRL--DAHAH 122
Query: 177 PEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFT 210
PEF EW+W I AV FK+P+Y+ + F
Sbjct: 123 PEFDEWRWTELSSIPALAVPFKRPIYERLARDFA 156
>sp|Q16BL5|RPPH_ROSDO RNA pyrophosphohydrolase OS=Roseobacter denitrificans (strain ATCC
33942 / OCh 114) GN=rppH PE=3 SV=1
Length = 160
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 93/156 (59%), Gaps = 14/156 (8%)
Query: 66 YRRNVGICLINSSKKIFAASRLDI-PDSWQMPQN-----EDPKVAALRELKEETGVSS-- 117
YR VG+ L+N ++F R D +WQMPQ EDP+ AALREL EETGV+
Sbjct: 11 YRPCVGVMLMNGQGEVFVGQRRDNNVAAWQMPQGGVEKGEDPRAAALRELWEETGVNPEL 70
Query: 118 AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKP 177
AEV+AE WL YD P ++ KL W G ++GQ QKWFL++F G + +IN+ +E P
Sbjct: 71 AEVVAETEDWLPYDLPYDLVPKL---WKGRYRGQEQKWFLMRFHGADSDINI---ATEHP 124
Query: 178 EFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 213
EF +W+W+ ++E V FK+ VY V F HL
Sbjct: 125 EFSQWRWLPAADLVENIVPFKRDVYVAVLDAFEAHL 160
>sp|A1B502|RPPH_PARDP RNA pyrophosphohydrolase OS=Paracoccus denitrificans (strain Pd
1222) GN=rppH PE=3 SV=1
Length = 163
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 90/152 (59%), Gaps = 14/152 (9%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPD-SWQMPQN-----EDPKVAALRELKEETGVSS-- 117
YR G+ LIN +FA R+D P +WQMPQ E P+ AALREL EETGV+
Sbjct: 13 YRPCAGVVLINPVGLVFAGQRIDNPGPAWQMPQGGIDRGESPREAALRELVEETGVTPDL 72
Query: 118 AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKP 177
+VLAE P W+TYD PPE+ K+ W G + GQ QKWF ++F G++ + + +E P
Sbjct: 73 VDVLAETPGWVTYDLPPELLGKV---WKGRYGGQKQKWFAMRFLGEDSAVRI---ATEHP 126
Query: 178 EFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
EF W+WM +++ V FK+ VY V + F
Sbjct: 127 EFERWQWMRAADLIDGIVPFKRDVYARVLSDF 158
>sp|Q92IV0|RPPH_RICCN RNA pyrophosphohydrolase OS=Rickettsia conorii (strain ATCC VR-613
/ Malish 7) GN=rppH PE=3 SV=1
Length = 161
Score = 120 bits (302), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 97/167 (58%), Gaps = 15/167 (8%)
Query: 54 SSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIPDS-WQMPQN-----EDPKVAALR 107
SS +D P YR VG+ ++N++ IF R+D S WQMPQ E P +AA+R
Sbjct: 4 SSKKHLDLP---YRPGVGMMILNANNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMR 60
Query: 108 ELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEI 167
E+ EE G ++AE +W +YD P + KL W G+++GQ Q+WFL++FTG E+I
Sbjct: 61 EMLEEIGSDKGYIIAESKFWYSYDVPSFLIPKL---WNGNFRGQKQRWFLIRFTGNNEDI 117
Query: 168 NLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
N+ + PEF +W+W S +++L + FK+ +Y+ V F +Q
Sbjct: 118 NI---NTSNPEFDQWRWASLDELLSIIIPFKRKLYQAVVKEFESLIQ 161
>sp|C4K0V5|RPPH_RICPU RNA pyrophosphohydrolase OS=Rickettsia peacockii (strain Rustic)
GN=rppH PE=3 SV=1
Length = 161
Score = 120 bits (301), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 96/167 (57%), Gaps = 15/167 (8%)
Query: 54 SSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIPDS-WQMPQN-----EDPKVAALR 107
SS +D P YR VG+ ++N+ IF R+D S WQMPQ E P +AA+R
Sbjct: 4 SSKKHLDLP---YRPGVGMMILNADNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMR 60
Query: 108 ELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEI 167
E+ EE G ++AE +W +YD P + KL W G+++GQ Q+WFL++FTG E+I
Sbjct: 61 EMLEEIGSDKGYIIAESKFWYSYDVPSFLIPKL---WNGNFRGQKQRWFLIRFTGNNEDI 117
Query: 168 NLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
N+ + PEF +W+W S +++L + FK+ +Y+ V F +Q
Sbjct: 118 NI---NTSNPEFDQWRWASLDELLSIIIPFKRKLYQAVVKEFESLIQ 161
>sp|Q2N9Y3|RPPH_ERYLH RNA pyrophosphohydrolase OS=Erythrobacter litoralis (strain
HTCC2594) GN=rppH PE=3 SV=1
Length = 164
Score = 120 bits (301), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 99/164 (60%), Gaps = 14/164 (8%)
Query: 55 SSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIPD--SWQMPQN-----EDPKVAALR 107
+S S D YR+ G+ L N +FAA R+D + +WQMPQ E + AA+R
Sbjct: 2 ASGSADHEDLRYRQCAGVMLANREGLVFAAQRIDSKNLGAWQMPQGGIDPGETQQEAAMR 61
Query: 108 ELKEETGVSS--AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEE 165
EL+EETGVS+ A+V+A +PY + YD P E++ KL WGG ++GQ Q WFL +FTG +
Sbjct: 62 ELEEETGVSADLADVIARMPYPVRYDLPEELQGKL---WGGRYRGQEQHWFLARFTGTDA 118
Query: 166 EINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
+I++ PEF EWKW+ P+++ V FK+ VY+ V F
Sbjct: 119 DIDIAAHNP--PEFSEWKWVEPDELPRLIVPFKREVYRAVVKEF 160
>sp|B3CSR8|RPPH_ORITI RNA pyrophosphohydrolase OS=Orientia tsutsugamushi (strain Ikeda)
GN=rppH PE=3 SV=1
Length = 161
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 89/154 (57%), Gaps = 12/154 (7%)
Query: 66 YRRNVGICLINSSKKIFAASRLD-IPDSWQMPQN-----EDPKVAALRELKEETGVSSAE 119
YR VG+ +IN K+IF R+D WQMPQ E A LRE+KEE G + A
Sbjct: 13 YRIGVGMVIINQKKEIFTGQRIDSARQYWQMPQGGIILGETYSKAVLREMKEEIGCNKAI 72
Query: 120 VLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEF 179
++AE W +Y P + KL W ++KGQ QKWFL+KF GK+E+IN+ + PEF
Sbjct: 73 IMAESRNWYSYHIPKFLVHKL---WNSNFKGQKQKWFLIKFLGKDEDINI---NTIYPEF 126
Query: 180 GEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 213
+WKWM+ Q++ A+ FK+ +YK V F L
Sbjct: 127 SQWKWMNSNQLINNALPFKRKLYKAVINEFHIFL 160
>sp|A5CD16|RPPH_ORITB RNA pyrophosphohydrolase OS=Orientia tsutsugamushi (strain Boryong)
GN=rppH PE=3 SV=1
Length = 161
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 89/154 (57%), Gaps = 12/154 (7%)
Query: 66 YRRNVGICLINSSKKIFAASRLD-IPDSWQMPQN-----EDPKVAALRELKEETGVSSAE 119
YR VG+ +IN K+IF R+D WQMPQ E A LRE+KEE G + A
Sbjct: 13 YRIGVGMVIINQKKEIFTGQRIDSARQYWQMPQGGIILGETYSKAVLREMKEEIGCNKAI 72
Query: 120 VLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEF 179
++AE W +Y P + KL W ++KGQ QKWFL+KF GK+E+IN+ + PEF
Sbjct: 73 IMAESRNWYSYHIPKFLVHKL---WNSNFKGQKQKWFLIKFLGKDEDINI---NTIYPEF 126
Query: 180 GEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 213
+WKWM+ Q++ A+ FK+ +YK V F L
Sbjct: 127 SQWKWMNSNQLINNALPFKRKLYKAVINEFHIFL 160
>sp|Q1RHV9|RPPH_RICBR RNA pyrophosphohydrolase OS=Rickettsia bellii (strain RML369-C)
GN=rppH PE=3 SV=1
Length = 161
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 92/155 (59%), Gaps = 12/155 (7%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPDS-WQMPQN-----EDPKVAALRELKEETGVSSAE 119
YR VG+ ++N+ KIF R+D S WQMPQ E P +AA+RE+ EE G S
Sbjct: 13 YRPGVGMMILNADNKIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSSKGY 72
Query: 120 VLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEF 179
++AE W +YD P + KL W G+++GQ Q+WFL++FTG E+IN+ + PEF
Sbjct: 73 IIAESKCWYSYDVPSFLIPKL---WDGNFRGQKQRWFLIRFTGTNEDINI---NTLNPEF 126
Query: 180 GEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
EW+W S +++L + FK+ +Y+ V F +Q
Sbjct: 127 DEWRWASLDELLSIIIPFKRKLYQAVVKEFESLIQ 161
>sp|A8GW83|RPPH_RICB8 RNA pyrophosphohydrolase OS=Rickettsia bellii (strain OSU 85-389)
GN=rppH PE=3 SV=1
Length = 161
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 92/155 (59%), Gaps = 12/155 (7%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPDS-WQMPQN-----EDPKVAALRELKEETGVSSAE 119
YR VG+ ++N+ KIF R+D S WQMPQ E P +AA+RE+ EE G S
Sbjct: 13 YRPGVGMMILNADNKIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSSKGY 72
Query: 120 VLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEF 179
++AE W +YD P + KL W G+++GQ Q+WFL++FTG E+IN+ + PEF
Sbjct: 73 IIAESKCWYSYDVPSFLIPKL---WDGNFRGQKQRWFLIRFTGTNEDINI---NTLNPEF 126
Query: 180 GEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
EW+W S +++L + FK+ +Y+ V F +Q
Sbjct: 127 DEWRWASLDELLSIIIPFKRKLYQAVVKEFESLIQ 161
>sp|C3PMT3|RPPH_RICAE RNA pyrophosphohydrolase OS=Rickettsia africae (strain ESF-5)
GN=rppH PE=3 SV=1
Length = 161
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 95/167 (56%), Gaps = 15/167 (8%)
Query: 54 SSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIPDS-WQMPQN-----EDPKVAALR 107
SS D P YR VG+ ++N+ IF R+D S WQMPQ E P +AA+R
Sbjct: 4 SSKKHFDLP---YRPGVGMMILNADNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMR 60
Query: 108 ELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEI 167
E+ EE G ++AE +W +YD P + KL W G+++GQ Q+WFL++FTG E+I
Sbjct: 61 EMLEEIGSDKGYIIAESKFWYSYDVPSFLIPKL---WNGNFRGQQQRWFLIRFTGNNEDI 117
Query: 168 NLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
N+ + PEF +W+W S +++L + FK+ +Y+ V F +Q
Sbjct: 118 NI---NTSNPEFDQWRWASLDELLSIIIPFKRKLYQAVVKEFESLIQ 161
>sp|Q9RH11|RPPH_ZYMMO RNA pyrophosphohydrolase OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=rppH PE=3 SV=1
Length = 155
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 14/156 (8%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPD-SWQMPQN-----EDPKVAALRELKEETGV--SS 117
YR VGI L+N +FAA R D+ + +WQMPQ E P+V LREL+EETG+
Sbjct: 6 YRSGVGIMLLNKDNLVFAACRNDMKEEAWQMPQGGLEAKETPEVGVLRELEEETGIPPRM 65
Query: 118 AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKP 177
+++ WLTYDFP +++ + ++GQ Q WFL ++ G++E+IN+ ++KP
Sbjct: 66 VAIISHTKEWLTYDFPADLQASF---FKNKYRGQRQLWFLARYLGRDEDINI---NTDKP 119
Query: 178 EFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHL 213
EF WKW+ P+Q+ + V FKKP+Y+++ + F+ L
Sbjct: 120 EFRAWKWVEPKQLPDLIVAFKKPLYEKILSEFSASL 155
>sp|A8GMN4|RPPH_RICAH RNA pyrophosphohydrolase OS=Rickettsia akari (strain Hartford)
GN=rppH PE=3 SV=1
Length = 161
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 15/167 (8%)
Query: 54 SSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIP-DSWQMPQN-----EDPKVAALR 107
SS +D P YR VG+ ++N+ IF R+D +WQMPQ E P +AA+R
Sbjct: 4 SSKKHLDLP---YRLGVGMMILNADNHIFVGKRIDTKLSAWQMPQGGIVPGETPSIAAMR 60
Query: 108 ELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEI 167
E+ EE G ++AE W +YD P + KL W G+++GQ Q+WFL++FTG E+I
Sbjct: 61 EMLEEIGSDKGYIIAESKCWYSYDVPSLLIPKL---WNGNFRGQKQRWFLIRFTGNNEDI 117
Query: 168 NLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
N+ + PEF +W+W S +++L + FK+ +Y+ V F +Q
Sbjct: 118 NI---NTSNPEFDQWRWASLDELLSIIIPFKRKLYQAVVKEFKSLIQ 161
>sp|Q9ZDT9|RPPH_RICPR RNA pyrophosphohydrolase OS=Rickettsia prowazekii (strain Madrid E)
GN=rppH PE=1 SV=1
Length = 161
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 98/167 (58%), Gaps = 15/167 (8%)
Query: 54 SSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIP-DSWQMPQN-----EDPKVAALR 107
SS+ +D P YR VG+ ++N+ +IF R+D SWQMPQ E P +AA+R
Sbjct: 4 SSNKYLDLP---YRPGVGMMILNADNQIFVGKRIDTKISSWQMPQGGIVPGETPSIAAMR 60
Query: 108 ELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEI 167
E+ EE G + ++AE W +YD P + KL W G+++GQ Q+WFL++FTG ++I
Sbjct: 61 EMLEEIGSNKGYIIAESKCWYSYDVPSFLIPKL---WNGNFRGQKQRWFLIRFTGNNKDI 117
Query: 168 NLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
N+ + PEF +W+W S +++L + FK+ +Y+ V F +Q
Sbjct: 118 NI---HTSNPEFDQWRWTSLDELLSIIIPFKRKLYQAVVKEFESLIQ 161
>sp|B3CM46|RPPH_WOLPP RNA pyrophosphohydrolase OS=Wolbachia pipientis subsp. Culex
pipiens (strain wPip) GN=rppH PE=3 SV=1
Length = 162
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 91/154 (59%), Gaps = 10/154 (6%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPDSWQMPQN-----EDPKVAALRELKEETGVSSAEV 120
YR VGI L N IF R D WQMPQ E+ + AALREL EE G AEV
Sbjct: 8 YRPCVGIMLFNKQGNIFIGKRFDSDSYWQMPQGGVDEGEELEQAALRELLEEVGTDEAEV 67
Query: 121 LAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFG 180
+A+ W+ Y+ P EV + W G + GQ Q+WFL+KF GK+++IN+ + ++ PEF
Sbjct: 68 VAQNKEWIYYNLPEEV---IPICWNGRYSGQKQRWFLMKFCGKDKDINI--NYTDHPEFK 122
Query: 181 EWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
EW+W + + ++ A+ FKK VYK+V F+ ++
Sbjct: 123 EWRWQNVDDLVASAIPFKKEVYKKVIEEFSSIIK 156
>sp|A9H3A6|RPPH_GLUDA RNA pyrophosphohydrolase OS=Gluconacetobacter diazotrophicus
(strain ATCC 49037 / DSM 5601 / PAl5) GN=rppH PE=3 SV=1
Length = 167
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 86/158 (54%), Gaps = 18/158 (11%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPDS--------WQMPQ-----NEDPKVAALRELKEE 112
YRRNVG L N+ +I R D P + WQ PQ +EDP+ A LREL+EE
Sbjct: 9 YRRNVGAMLFNAQGRILIGRRTDQPGAGGPLDGGVWQCPQGGIDADEDPEEAVLRELREE 68
Query: 113 TGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGD 172
G A ++ P WLTYD P + + GG ++GQ QKWF L+FTG++ +I L D
Sbjct: 69 IGTDRAVIMGARPDWLTYDLPAAL---IGRALGGRYRGQTQKWFALRFTGQDSDIRL--D 123
Query: 173 KSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFT 210
+ PEF W+W+ + ER V FK+ +Y+ + F
Sbjct: 124 DQQPPEFDAWQWIDLPSLPERNVGFKRDIYRTLVRDFA 161
>sp|Q4UKM5|RPPH_RICFE RNA pyrophosphohydrolase OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=rppH PE=3 SV=1
Length = 161
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 95/167 (56%), Gaps = 15/167 (8%)
Query: 54 SSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIPDS-WQMPQN-----EDPKVAALR 107
SS +D P YR VG+ ++N+ IF R+D S WQMPQ E P +AA+R
Sbjct: 4 SSKKHLDLP---YRPGVGMMILNADNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMR 60
Query: 108 ELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEI 167
E+ EE G ++AE W +YD P + KL W G+++GQ Q+WFL++FTG E+I
Sbjct: 61 EMLEEIGSDKGYIIAESKCWYSYDVPSFLIPKL---WNGNFRGQKQRWFLIRFTGNNEDI 117
Query: 168 NLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
N+ + PEF +W+W S +++L + FK+ +Y+ V F +Q
Sbjct: 118 NI---NTSNPEFDQWRWASLDELLSIIIPFKRKLYQAVVKEFESLIQ 161
>sp|A8GRA7|RPPH_RICRS RNA pyrophosphohydrolase OS=Rickettsia rickettsii (strain Sheila
Smith) GN=rppH PE=3 SV=1
Length = 161
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 95/167 (56%), Gaps = 15/167 (8%)
Query: 54 SSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIPDS-WQMPQN-----EDPKVAALR 107
SS +D P YR VG+ ++N+ IF R+D S WQMPQ E P +AA+R
Sbjct: 4 SSKKHLDLP---YRPGVGMMILNADNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMR 60
Query: 108 ELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEI 167
E+ EE G ++AE W +YD P + KL W G+++GQ Q+WFL++FTG E+I
Sbjct: 61 EMLEEIGSDKGYIIAESKCWYSYDVPSFLIPKL---WNGNFRGQKQRWFLIRFTGNNEDI 117
Query: 168 NLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
N+ + PEF +W+W S +++L + FK+ +Y+ V F +Q
Sbjct: 118 NI---NTSNPEFDQWRWASLDELLSIIIPFKRKLYQAVVKEFESLIQ 161
>sp|B0BWQ7|RPPH_RICRO RNA pyrophosphohydrolase OS=Rickettsia rickettsii (strain Iowa)
GN=rppH PE=3 SV=1
Length = 161
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 95/167 (56%), Gaps = 15/167 (8%)
Query: 54 SSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIPDS-WQMPQN-----EDPKVAALR 107
SS +D P YR VG+ ++N+ IF R+D S WQMPQ E P +AA+R
Sbjct: 4 SSKKHLDLP---YRPGVGMMILNADNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMR 60
Query: 108 ELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEI 167
E+ EE G ++AE W +YD P + KL W G+++GQ Q+WFL++FTG E+I
Sbjct: 61 EMLEEIGSDKGYIIAESKCWYSYDVPSFLIPKL---WNGNFRGQKQRWFLIRFTGNNEDI 117
Query: 168 NLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
N+ + PEF +W+W S +++L + FK+ +Y+ V F +Q
Sbjct: 118 NI---NTSNPEFDQWRWASLDELLSIIIPFKRKLYQAVVKEFESLIQ 161
>sp|Q68XD3|RPPH_RICTY RNA pyrophosphohydrolase OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=rppH PE=3 SV=1
Length = 161
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 98/167 (58%), Gaps = 15/167 (8%)
Query: 54 SSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIPDS-WQMPQN-----EDPKVAALR 107
SS+ +D P YR VG+ ++N+ +IF R+D S WQMPQ E P +AA+R
Sbjct: 4 SSNKYLDLP---YRPGVGMMILNADNQIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMR 60
Query: 108 ELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEI 167
E+ EE G + ++AE W +YD P + KL W G+++GQ Q+WFL++FTG ++I
Sbjct: 61 EMLEEIGSNKGYIIAESKCWYSYDVPSFLIPKL---WNGNFRGQKQRWFLIRFTGNNKDI 117
Query: 168 NLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
N+ + PEF +W+W S +++L + FK+ +Y+ V F +Q
Sbjct: 118 NI---HTSNPEFDQWRWTSLDELLSIIIPFKRKLYQAVVKEFESLIQ 161
>sp|A8EXY5|RPPH_RICCK RNA pyrophosphohydrolase OS=Rickettsia canadensis (strain McKiel)
GN=rppH PE=3 SV=1
Length = 161
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 94/167 (56%), Gaps = 15/167 (8%)
Query: 54 SSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIPDS-WQMPQN-----EDPKVAALR 107
+S +D P YR VG+ ++N+ IF R+D S WQMPQ E P +AA+R
Sbjct: 4 ASKKHLDLP---YRPGVGMMILNADNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMR 60
Query: 108 ELKEETGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEI 167
E+ EE G ++AE W +YD P + KL W G+++GQ Q+WFL++FTG E+I
Sbjct: 61 EMLEEIGSDKGYIIAESKCWYSYDLPSFLIPKL---WNGNFRGQKQRWFLIRFTGNNEDI 117
Query: 168 NLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
N+ + PEF +W+W S ++L + FK+ +Y+ V F +Q
Sbjct: 118 NI---NTSNPEFDQWRWASLNELLSIIIPFKRKLYQAVVKEFDSLIQ 161
>sp|Q2G7H8|RPPH_NOVAD RNA pyrophosphohydrolase OS=Novosphingobium aromaticivorans (strain
DSM 12444) GN=rppH PE=3 SV=1
Length = 161
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 14/153 (9%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPD--SWQMPQN-----EDPKVAALRELKEETGVSS- 117
YR VG+ L+NS ++F R+D D +WQMPQ E+ AALREL EETGV++
Sbjct: 10 YRPCVGVMLVNSQGRVFVGRRIDDKDGVAWQMPQGGIDDGEELHPAALRELSEETGVAAE 69
Query: 118 -AEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEK 176
++AE YD P E+ KL WGG ++GQ QKW LL+F G++ +I L D +
Sbjct: 70 LVTIIAESREEHLYDLPDELIGKL---WGGQYRGQRQKWLLLRFAGEDTDIRL--DAHDP 124
Query: 177 PEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
EF EW+W+ PEQ+ + V FK+ VY++V F
Sbjct: 125 AEFSEWRWVEPEQLPDLIVPFKRRVYRQVVDEF 157
>sp|Q4FP40|RPPH_PELUB RNA pyrophosphohydrolase OS=Pelagibacter ubique (strain HTCC1062)
GN=rppH PE=3 SV=1
Length = 158
Score = 114 bits (284), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 88/145 (60%), Gaps = 12/145 (8%)
Query: 67 RRNVGICLINSSKKIFAASRLDIPDS-WQMPQN-----EDPKVAALRELKEETGVSSAEV 120
R VGI ++N K+F A R+D + WQMPQ ED AA REL+EET + + E+
Sbjct: 11 RNGVGIVVLNKDNKVFVAKRIDNQKNFWQMPQGGVDKGEDYLTAAYRELEEETSIKNVEL 70
Query: 121 LAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFG 180
+ E ++Y+ P + L W G ++GQ QKWF+++F G++ EI++ K++ PEF
Sbjct: 71 IKECDGLISYELPKNL---LGIIWKGKYRGQEQKWFIMRFLGQDNEIDI---KTKHPEFS 124
Query: 181 EWKWMSPEQILERAVDFKKPVYKEV 205
EWKW+ E I + VDFK VYK+V
Sbjct: 125 EWKWIDLENITDLVVDFKLHVYKDV 149
>sp|Q5GT39|RPPH_WOLTR RNA pyrophosphohydrolase OS=Wolbachia sp. subsp. Brugia malayi
(strain TRS) GN=rppH PE=3 SV=1
Length = 161
Score = 113 bits (283), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 10/154 (6%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPDSWQMPQN-----EDPKVAALRELKEETGVSSAEV 120
YR VGI L N +F R D WQMPQ E + AALREL EE G A++
Sbjct: 8 YRPCVGIMLFNKQGHVFIGKRFDSDSYWQMPQGGIDDGEKLEQAALRELLEEVGTDKAKI 67
Query: 121 LAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFG 180
+A+ W+ Y+ P EV + W G + GQ Q+WFL+KF G+ ++IN+ + ++ PEF
Sbjct: 68 IAKNKDWIYYNLPEEV---IPTCWNGRYSGQKQRWFLMKFYGEGKDINI--NYTDHPEFK 122
Query: 181 EWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
EW+W S + ++ A+ FKK VYK V F+ ++
Sbjct: 123 EWRWQSVDNLVAGAIPFKKEVYKTVIEEFSSQIK 156
>sp|A8HRT0|RPPH_AZOC5 RNA pyrophosphohydrolase OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=rppH PE=3 SV=1
Length = 168
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 87/157 (55%), Gaps = 16/157 (10%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPD------SWQMPQN-----EDPKVAALRELKEETG 114
YR VG+ + N + ++F RL P+ SWQMPQ E+P AALREL EET
Sbjct: 9 YRPCVGLAIFNRAGQVFLGQRLSGPEHVDATHSWQMPQGGIDKGEEPYEAALRELYEETS 68
Query: 115 VSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLL--GD 172
+ S L EV WL+YD P V W G ++GQ QKWF L+FTG E EI++L G
Sbjct: 69 IRSVVKLGEVEDWLSYDLPGRV---AGEAWKGKYRGQTQKWFALRFTGDEGEIDILKPGG 125
Query: 173 KSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
+ K EF W+W + ++ E + FK+ VY+ V F
Sbjct: 126 GAHKAEFCNWRWDALDRAAELVIPFKRQVYERVAREF 162
>sp|Q9A2W6|RPPH_CAUCR RNA pyrophosphohydrolase OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=rppH PE=3 SV=1
Length = 172
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 85/151 (56%), Gaps = 11/151 (7%)
Query: 66 YRRNVGICLINSSKKIFAASRLDI--PDSWQMPQN-----EDPKVAALRELKEETGVSSA 118
+R NVG+ L + +++ R P +WQ PQ ED +VAA REL EETGV+S
Sbjct: 9 HRPNVGVVLFHPDGRVWLGRRHRQAPPYNWQFPQGGVDEGEDLEVAARRELAEETGVTSV 68
Query: 119 EVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPE 178
E+L W+TYDFPPEV KH G W+GQ Q WF +F G+E EI+L D E E
Sbjct: 69 ELLGRTEGWITYDFPPEVMANPKHARG--WRGQKQVWFAYRFVGEESEIDLEAD--EHIE 124
Query: 179 FGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
F W+W ++ E V FK+ VY+ V F
Sbjct: 125 FDAWRWGRLDETPELIVPFKRGVYEAVVAAF 155
>sp|B8H5H3|RPPH_CAUCN RNA pyrophosphohydrolase OS=Caulobacter crescentus (strain NA1000 /
CB15N) GN=rppH PE=3 SV=1
Length = 172
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 85/151 (56%), Gaps = 11/151 (7%)
Query: 66 YRRNVGICLINSSKKIFAASRLDI--PDSWQMPQN-----EDPKVAALRELKEETGVSSA 118
+R NVG+ L + +++ R P +WQ PQ ED +VAA REL EETGV+S
Sbjct: 9 HRPNVGVVLFHPDGRVWLGRRHRQAPPYNWQFPQGGVDEGEDLEVAARRELAEETGVTSV 68
Query: 119 EVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPE 178
E+L W+TYDFPPEV KH G W+GQ Q WF +F G+E EI+L D E E
Sbjct: 69 ELLGRTEGWITYDFPPEVMANPKHARG--WRGQKQVWFAYRFVGEESEIDLEAD--EHIE 124
Query: 179 FGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
F W+W ++ E V FK+ VY+ V F
Sbjct: 125 FDAWRWGRLDETPELIVPFKRGVYEAVVAAF 155
>sp|Q2J3I9|RPPH_RHOP2 RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain
HaA2) GN=rppH PE=3 SV=1
Length = 167
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 84/156 (53%), Gaps = 14/156 (8%)
Query: 66 YRRNVGICLINSSKKIFAASR------LDIPDSWQMPQN-----EDPKVAALRELKEETG 114
YR VG+ LIN + +F R +D WQMPQ ED AA REL EET
Sbjct: 9 YRTCVGMMLINRAGLVFIGRRAGGIEHVDDTHVWQMPQGGVDPGEDTWEAAKRELYEETN 68
Query: 115 VSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKS 174
V S E +AEVP WL YD P R W G ++GQ QKWF ++FTG++ EI+++
Sbjct: 69 VRSVEKIAEVPDWLIYDIP---RTVAGRAWKGRYRGQRQKWFAIRFTGQDSEIDIIAPPG 125
Query: 175 EKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFT 210
K EF W+W + + V FK+PVY+ V F+
Sbjct: 126 HKSEFTSWRWEPMLNLPDLIVPFKRPVYERVVKEFS 161
>sp|Q3SVH3|RPPH_NITWN RNA pyrophosphohydrolase OS=Nitrobacter winogradskyi (strain Nb-255
/ ATCC 25391) GN=rppH PE=3 SV=1
Length = 170
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 86/157 (54%), Gaps = 16/157 (10%)
Query: 66 YRRNVGICLINSSKKIFAASRLDI---PDS--WQMPQN-----EDPKVAALRELKEETGV 115
YR VG+ LIN +F R + DS WQMPQ ED +AA REL EET V
Sbjct: 9 YRTCVGMMLINERGLVFVGRRAGVEQVDDSYVWQMPQGGVDPGEDTWLAAKRELYEETSV 68
Query: 116 SSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLL--GDK 173
S E LAE+P WLTYD P R W G ++GQ QKW+ ++F G++ EIN+ GD
Sbjct: 69 RSIEKLAEIPDWLTYDIP---RVVAGRAWKGRYRGQRQKWYAVRFIGEDNEINIANPGD- 124
Query: 174 SEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFT 210
KPEF W+W + + + FK+PVY+ V F
Sbjct: 125 GHKPEFTAWRWEPMQNLTGLIIPFKRPVYERVVKEFA 161
>sp|Q13DN7|RPPH_RHOPS RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain
BisB5) GN=rppH PE=3 SV=1
Length = 167
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 66 YRRNVGICLINSSKKIFAASR------LDIPDSWQMPQN-----EDPKVAALRELKEETG 114
YR VG+ LIN +F R +D WQMPQ ED AA REL EET
Sbjct: 9 YRTCVGMMLINREGLVFIGRRAGGIEHVDDTHVWQMPQGGVDPGEDTWEAAKRELYEETN 68
Query: 115 VSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKS 174
V S E + EVP WL YD P R W G ++GQ QKWF ++FTG + EI++
Sbjct: 69 VRSVEKIGEVPDWLIYDIP---RTVAGRAWKGRYRGQRQKWFAVRFTGADSEIDVGAPGG 125
Query: 175 EKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFT 210
KPEF W+W + + + V FK+PVY+ V F+
Sbjct: 126 HKPEFTGWRWEPMQNLPDLIVPFKRPVYERVVKEFS 161
>sp|C0R4X8|RPPH_WOLWR RNA pyrophosphohydrolase OS=Wolbachia sp. subsp. Drosophila
simulans (strain wRi) GN=rppH PE=3 SV=1
Length = 162
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 86/154 (55%), Gaps = 10/154 (6%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPDSWQMPQN-----EDPKVAALRELKEETGVSSAEV 120
YR VGI L N F R D WQMPQ E+ + AALREL EE G + +V
Sbjct: 8 YRPCVGIMLFNRQGHAFIGKRFDSDSYWQMPQGGVDDGEELEQAALRELLEEVGTNKVKV 67
Query: 121 LAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFG 180
+ + W+ Y+ P EV + W G + GQ Q+WFL+KF G++E+I++ + + PEF
Sbjct: 68 ITKSKDWIYYNLPEEV---IPICWNGKYSGQKQRWFLMKFCGEDEDIDI--NYTGHPEFK 122
Query: 181 EWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
EW+W + ++ A+ FKK VYK V F+ ++
Sbjct: 123 EWRWQGIDSLVASAISFKKEVYKTVIEEFSSIIK 156
>sp|P61786|RPPH_RHOPA RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=rppH PE=3 SV=1
Length = 168
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 66 YRRNVGICLINSSKKIFAASR------LDIPDSWQMPQN-----EDPKVAALRELKEETG 114
YR VG+ LIN +F R +D WQMPQ ED AA REL EET
Sbjct: 9 YRTCVGVMLINREGLVFIGRRAGGIEHVDDTHVWQMPQGGVDPGEDTWKAAKRELYEETS 68
Query: 115 VSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLG-DK 173
V+S E LAEVP WL YD P R W G ++GQ QKWF +FTG + EIN++
Sbjct: 69 VNSVEKLAEVPDWLIYDIP---RTVAGRAWKGRYRGQRQKWFAARFTGADSEINVVHPGG 125
Query: 174 SEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFT 210
K EF W+W + E V FK+PVY+ V F+
Sbjct: 126 GHKAEFTSWRWEPMHNLPELIVPFKRPVYERVVKEFS 162
>sp|A4YKE4|RPPH_BRASO RNA pyrophosphohydrolase OS=Bradyrhizobium sp. (strain ORS278)
GN=rppH PE=3 SV=1
Length = 168
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 83/158 (52%), Gaps = 16/158 (10%)
Query: 66 YRRNVGICLINSSKKIFAASR------LDIPDSWQMPQN-----EDPKVAALRELKEETG 114
YR VGI LINS +F R +D WQMPQ ED AA REL EET
Sbjct: 9 YRTCVGIALINSEGLVFIGRRAGGIEHVDDTHVWQMPQGGVDPGEDAWEAAKRELYEETS 68
Query: 115 VSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLL--GD 172
V S E LAE+ WLTYD P R W G ++GQ QKWF L+FTGK+ EI++ G
Sbjct: 69 VRSVEKLAEIDDWLTYDIP---RTVAGRAWKGRYRGQRQKWFALRFTGKDSEIDVEHPGG 125
Query: 173 KSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFT 210
K EF W+W + + V FK+PVY+ V F
Sbjct: 126 GHHKAEFITWRWEPLQNLPTLIVPFKRPVYERVAKEFA 163
>sp|Q89X78|RPPH_BRAJA RNA pyrophosphohydrolase OS=Bradyrhizobium japonicum (strain USDA
110) GN=rppH PE=3 SV=1
Length = 167
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 66 YRRNVGICLINSSKKIFAASR------LDIPDSWQMPQN-----EDPKVAALRELKEETG 114
YR VG+ LIN+ +F R +D WQMPQ ED AA REL EET
Sbjct: 9 YRTCVGVMLINAKGLVFIGRRAGGIEHIDDTHVWQMPQGGVDPGEDTWAAAKRELYEETS 68
Query: 115 VSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLG-DK 173
V S E L EVP WL YD P R W G ++GQ QKWF ++FTGK+ EIN+
Sbjct: 69 VRSVERLGEVPDWLIYDIP---RTVAGRAWKGRYRGQRQKWFAVRFTGKDSEINVENPGG 125
Query: 174 SEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFT 210
K EF W+W + + + FK+PVY+ V F+
Sbjct: 126 GHKAEFVSWRWEPMKNLPGLIIPFKRPVYERVVKEFS 162
>sp|A5E954|RPPH_BRASB RNA pyrophosphohydrolase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182) GN=rppH PE=3 SV=1
Length = 168
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 82/158 (51%), Gaps = 16/158 (10%)
Query: 66 YRRNVGICLINSSKKIFAASR------LDIPDSWQMPQN-----EDPKVAALRELKEETG 114
YR VGI LINS +F R +D WQMPQ ED AA REL EET
Sbjct: 9 YRTCVGIALINSEGLVFIGRRAGGIEHVDDAHVWQMPQGGVDPGEDAWEAAKRELYEETS 68
Query: 115 VSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLL--GD 172
V S E LAE+ WLTYD P R W G ++GQ QKWF L+FTG + EI++ G
Sbjct: 69 VRSVEKLAEIDDWLTYDIP---RTVAGRAWKGRYRGQRQKWFALRFTGTDTEIDVERPGG 125
Query: 173 KSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFT 210
K EF W+W + + V FK+PVY+ V F
Sbjct: 126 GVHKAEFISWRWEPMQNLPTLIVPFKRPVYERVVKEFA 163
>sp|P61787|RPPH_WOLPM RNA pyrophosphohydrolase OS=Wolbachia pipientis wMel GN=rppH PE=3
SV=1
Length = 162
Score = 107 bits (268), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 10/154 (6%)
Query: 66 YRRNVGICLINSSKKIFAASRLDIPDSWQMPQN-----EDPKVAALRELKEETGVSSAEV 120
YR VGI L N F R + WQMPQ E+ + AALREL EE G + +V
Sbjct: 8 YRPCVGIMLFNRQGHAFIGKRFESDSYWQMPQGGVDDGEELEQAALRELLEEVGTNKVKV 67
Query: 121 LAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFG 180
+ + W+ Y+ P EV + W G + GQ Q+WFL+KF G++E+I++ + + PEF
Sbjct: 68 ITKSKDWIYYNLPEEV---IPICWNGKYSGQKQRWFLMKFCGEDEDIDI--NYTGHPEFK 122
Query: 181 EWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 214
EW+W + ++ A+ FKK VYK V F+ ++
Sbjct: 123 EWRWQGIDSLVASAISFKKEVYKTVIEEFSSIIK 156
>sp|Q6G4Y4|RPPH_BARHE RNA pyrophosphohydrolase OS=Bartonella henselae (strain ATCC 49882
/ Houston 1) GN=rppH PE=3 SV=1
Length = 173
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 84/158 (53%), Gaps = 17/158 (10%)
Query: 66 YRRNVGICLINSSKKIFAASRL--------DIPDSWQMPQ-----NEDPKVAALRELKEE 112
YRR+VGI + N K++ RL I WQ+PQ NE+P AA REL EE
Sbjct: 12 YRRSVGILVFNHEGKVWVGRRLMVCIHEDTKIYHRWQLPQGGIDENEEPLDAARRELYEE 71
Query: 113 TGVSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLL-G 171
TG+ S E++ E YW YDFP E+ + G ++GQ QKWF +FTG+ EI +
Sbjct: 72 TGIRSIELIKEAKYWFHYDFPQEI---VGSVLGSKYRGQIQKWFAFQFTGELSEIKINPP 128
Query: 172 DKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
K EF +WKW+ E + + FKK VY ++ F
Sbjct: 129 PDGHKAEFDQWKWVDLETLPSIVISFKKHVYMKIVNEF 166
>sp|Q21CZ3|RPPH_RHOPB RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain
BisB18) GN=rppH PE=3 SV=1
Length = 175
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 66 YRRNVGICLINSSKKIFAASRL------DIPDSWQMPQN-----EDPKVAALRELKEETG 114
YR VG+ L+N+ +F RL D WQMPQ EDP AA REL EET
Sbjct: 9 YRTCVGMMLLNAEGLVFIGRRLGGIEHVDETHVWQMPQGGVDPGEDPWTAAKRELYEETS 68
Query: 115 VSSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLG-DK 173
V S E L E+ WL YD P R W G ++GQ QKW+ ++FTG + EI+++
Sbjct: 69 VRSVEKLGEIADWLIYDIP---RTVAGRSWKGRYRGQRQKWYAVRFTGDDSEIDVVSPGG 125
Query: 174 SEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFT 210
K EF W+W + + + V FK+PVY+ V F
Sbjct: 126 GHKAEFISWRWEPMQNLPDLIVPFKRPVYERVVKEFA 162
>sp|A6Q441|RPPH_NITSB RNA pyrophosphohydrolase OS=Nitratiruptor sp. (strain SB155-2)
GN=rppH PE=3 SV=1
Length = 155
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 93/153 (60%), Gaps = 18/153 (11%)
Query: 66 YRRNVGICLINSS--KKI--FAASRLDIPDSWQMPQN-----EDPKVAALRELKEETGVS 116
YR NV +++S+ KK+ F A+R D+PDSWQ PQ E PK A LRELKEE G
Sbjct: 6 YRPNVAAIVLSSNYPKKVEFFIAARSDVPDSWQFPQGGIDKGESPKEALLRELKEEIGTD 65
Query: 117 SAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEK 176
E++AE P W++YDFP ++ +K+ + GQ QK+FL+K E +I+L +++
Sbjct: 66 KIEIIAEFPEWVSYDFPKKIAKKM-----YPYDGQTQKYFLVKLKP-EAKIDL---DTKE 116
Query: 177 PEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 209
PEF ++K++ + + FK+PVYK+V F
Sbjct: 117 PEFNDYKFVPYKDLFHYVTFFKRPVYKKVLEYF 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,105,786
Number of Sequences: 539616
Number of extensions: 3758177
Number of successful extensions: 10911
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 9625
Number of HSP's gapped (non-prelim): 361
length of query: 214
length of database: 191,569,459
effective HSP length: 113
effective length of query: 101
effective length of database: 130,592,851
effective search space: 13189877951
effective search space used: 13189877951
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)