Query 028090
Match_columns 214
No_of_seqs 115 out of 1371
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 06:05:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028090.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028090hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02901 1-acyl-sn-glycerol-3- 100.0 1.6E-39 3.4E-44 248.6 22.7 214 1-214 1-214 (214)
2 KOG2848 1-acyl-sn-glycerol-3-p 100.0 5.7E-40 1.2E-44 245.6 17.3 209 2-213 42-258 (276)
3 PRK15018 1-acyl-sn-glycerol-3- 100.0 1.4E-36 3E-41 235.7 19.4 191 18-212 34-231 (245)
4 PTZ00261 acyltransferase; Prov 100.0 5.2E-31 1.1E-35 209.7 19.9 165 44-210 125-307 (355)
5 cd07991 LPLAT_LPCAT1-like Lyso 100.0 1.6E-30 3.4E-35 198.8 18.4 174 33-213 9-201 (211)
6 cd07992 LPLAT_AAK14816-like Ly 100.0 1.8E-29 4E-34 191.9 17.9 176 26-210 4-202 (203)
7 cd07986 LPLAT_ACT14924-like Ly 100.0 1.2E-28 2.6E-33 188.1 14.2 167 33-205 6-208 (210)
8 PLN02783 diacylglycerol O-acyl 100.0 7.9E-28 1.7E-32 192.6 16.0 185 18-213 69-301 (315)
9 cd07987 LPLAT_MGAT-like Lysoph 100.0 5.6E-28 1.2E-32 184.9 14.1 170 33-213 3-210 (212)
10 cd07988 LPLAT_ABO13168-like Ly 100.0 3.4E-27 7.4E-32 172.9 17.4 145 37-205 10-161 (163)
11 COG0204 PlsC 1-acyl-sn-glycero 100.0 7.9E-27 1.7E-31 183.2 20.5 164 21-192 36-204 (255)
12 PLN02833 glycerol acyltransfer 99.9 3.5E-26 7.5E-31 186.2 19.9 182 25-213 140-340 (376)
13 PRK08043 bifunctional acyl-[ac 99.9 3E-26 6.6E-31 203.8 19.0 178 30-212 9-199 (718)
14 PRK08633 2-acyl-glycerophospho 99.9 7E-26 1.5E-30 210.2 21.9 172 29-204 421-601 (1146)
15 cd07983 LPLAT_DUF374-like Lyso 99.9 5.6E-26 1.2E-30 170.9 16.6 176 32-211 5-188 (189)
16 TIGR00530 AGP_acyltrn 1-acyl-s 99.9 4E-26 8.7E-31 161.5 14.7 128 34-162 1-129 (130)
17 PRK06814 acylglycerophosphoeth 99.9 1.7E-25 3.6E-30 207.8 20.1 158 32-193 436-597 (1140)
18 PLN02499 glycerol-3-phosphate 99.9 2.3E-25 5E-30 184.1 16.3 197 2-211 237-455 (498)
19 cd06551 LPLAT Lysophospholipid 99.9 1E-24 2.2E-29 163.7 17.4 167 33-210 10-186 (187)
20 cd07989 LPLAT_AGPAT-like Lysop 99.9 5.2E-24 1.1E-28 159.5 18.6 160 33-194 8-168 (184)
21 PRK14014 putative acyltransfer 99.9 3.4E-24 7.3E-29 171.0 18.0 180 32-212 70-285 (301)
22 cd07985 LPLAT_GPAT Lysophospho 99.9 2.8E-24 6E-29 162.7 15.3 168 42-211 15-233 (235)
23 PLN02177 glycerol-3-phosphate 99.9 3.8E-24 8.2E-29 180.2 17.6 197 2-211 250-468 (497)
24 PF01553 Acyltransferase: Acyl 99.9 3.2E-26 6.9E-31 162.5 2.0 127 36-163 1-132 (132)
25 cd07993 LPLAT_DHAPAT-like Lyso 99.9 1.4E-24 3E-29 165.2 9.8 144 49-192 21-200 (205)
26 PRK04974 glycerol-3-phosphate 99.9 5.9E-23 1.3E-27 180.6 17.3 179 12-191 261-478 (818)
27 PLN02588 glycerol-3-phosphate 99.9 9.7E-23 2.1E-27 168.2 16.1 199 1-212 276-501 (525)
28 PRK03355 glycerol-3-phosphate 99.9 9E-23 1.9E-27 178.1 14.5 178 13-192 226-446 (783)
29 TIGR03703 plsB glycerol-3-phos 99.9 3.7E-22 8.1E-27 175.5 16.6 180 12-192 251-469 (799)
30 smart00563 PlsC Phosphate acyl 99.9 1.5E-21 3.3E-26 135.4 12.5 113 52-164 1-117 (118)
31 cd07984 LPLAT_LABLAT-like Lyso 99.9 1.6E-20 3.5E-25 141.5 13.7 160 35-214 2-181 (192)
32 PTZ00374 dihydroxyacetone phos 99.8 2.3E-20 5E-25 163.5 13.9 180 13-192 586-810 (1108)
33 PLN02510 probable 1-acyl-sn-gl 99.8 5.1E-20 1.1E-24 150.2 13.5 123 33-162 77-208 (374)
34 KOG2847 Phosphate acyltransfer 99.8 4.2E-20 9.1E-25 138.3 9.0 162 29-192 42-224 (286)
35 PLN02380 1-acyl-sn-glycerol-3- 99.8 4.1E-18 8.9E-23 139.0 17.4 182 24-206 52-275 (376)
36 cd07990 LPLAT_LCLAT1-like Lyso 99.8 4.3E-18 9.2E-23 128.4 14.2 124 33-162 8-140 (193)
37 COG2121 Uncharacterized protei 99.8 1.5E-17 3.2E-22 121.8 14.8 182 16-202 9-200 (214)
38 PRK11915 glycerol-3-phosphate 99.7 8.1E-17 1.8E-21 137.2 12.4 144 49-192 114-293 (621)
39 PRK08419 lipid A biosynthesis 99.6 1.7E-14 3.6E-19 115.9 15.6 162 33-214 93-278 (298)
40 COG1560 HtrB Lauroyl/myristoyl 99.6 1.3E-13 2.7E-18 110.0 15.6 162 35-214 105-286 (308)
41 PRK07920 lipid A biosynthesis 99.5 1.1E-13 2.3E-18 111.2 12.6 163 35-214 88-271 (298)
42 PRK06946 lipid A biosynthesis 99.5 1.3E-12 2.8E-17 104.7 15.6 163 33-214 91-272 (293)
43 PRK06628 lipid A biosynthesis 99.5 2.3E-12 4.9E-17 103.1 16.7 162 33-214 96-278 (290)
44 PRK06553 lipid A biosynthesis 99.5 7.2E-13 1.6E-17 106.9 13.9 162 33-214 113-297 (308)
45 PF03279 Lip_A_acyltrans: Bact 99.5 3.3E-12 7.1E-17 102.6 15.4 163 33-214 101-283 (295)
46 TIGR02208 lipid_A_msbB lipid A 99.4 6E-12 1.3E-16 101.4 15.4 163 33-214 102-284 (305)
47 PRK08734 lipid A biosynthesis 99.4 7.2E-12 1.6E-16 100.9 15.6 161 36-214 96-275 (305)
48 PRK08943 lipid A biosynthesis 99.4 7E-12 1.5E-16 101.4 15.6 163 33-214 111-293 (314)
49 PRK05646 lipid A biosynthesis 99.4 8E-12 1.7E-16 100.9 15.2 164 33-214 103-285 (310)
50 PRK08733 lipid A biosynthesis 99.4 9.7E-12 2.1E-16 100.2 15.4 160 33-214 106-284 (306)
51 PRK06860 lipid A biosynthesis 99.4 8.2E-12 1.8E-16 100.8 14.9 161 33-214 106-287 (309)
52 PRK08025 lipid A biosynthesis 99.4 1.3E-11 2.9E-16 99.5 15.2 162 33-214 104-284 (305)
53 PRK08706 lipid A biosynthesis 99.4 1.5E-11 3.2E-16 98.5 14.8 160 35-214 88-268 (289)
54 TIGR02207 lipid_A_htrB lipid A 99.4 1.8E-11 3.9E-16 98.6 15.2 162 33-214 100-281 (303)
55 PRK08905 lipid A biosynthesis 99.4 1.7E-11 3.6E-16 98.1 13.0 161 36-214 84-262 (289)
56 KOG1505 Lysophosphatidic acid 99.3 1.1E-10 2.4E-15 94.5 16.4 156 49-206 70-264 (346)
57 COG2937 PlsB Glycerol-3-phosph 99.3 3.8E-12 8.2E-17 108.4 7.9 151 14-164 258-424 (810)
58 PRK05906 lipid A biosynthesis 99.3 7.1E-11 1.5E-15 99.0 14.3 146 48-214 138-302 (454)
59 PRK05645 lipid A biosynthesis 99.3 2.4E-10 5.2E-15 91.8 15.7 161 36-214 95-274 (295)
60 PLN02349 glycerol-3-phosphate 99.2 1.3E-10 2.7E-15 93.6 8.0 160 49-209 200-411 (426)
61 PF03982 DAGAT: Diacylglycerol 99.1 6.2E-10 1.3E-14 88.7 9.5 172 34-213 48-282 (297)
62 KOG4321 Predicted phosphate ac 98.9 1.3E-09 2.9E-14 78.1 4.9 168 14-193 10-208 (279)
63 KOG3729 Mitochondrial glycerol 98.9 5.7E-09 1.2E-13 86.7 9.0 150 16-165 119-293 (715)
64 PRK15174 Vi polysaccharide exp 98.9 6.2E-08 1.3E-12 86.0 14.1 157 36-211 461-631 (656)
65 KOG3730 Acyl-CoA:dihydroxyacte 98.7 2.4E-08 5.3E-13 82.0 5.5 176 16-191 112-329 (685)
66 KOG2898 Predicted phosphate ac 98.5 3.2E-07 7E-12 74.0 6.9 171 35-212 124-314 (354)
67 KOG0831 Acyl-CoA:diacylglycero 98.3 1.8E-05 4E-10 62.7 11.5 127 33-168 85-231 (334)
68 PF04028 DUF374: Domain of unk 98.2 9E-06 1.9E-10 51.0 6.3 60 76-135 13-72 (74)
69 COG3176 Putative hemolysin [Ge 97.7 7.3E-05 1.6E-09 59.1 5.0 131 33-169 64-207 (292)
70 KOG4666 Predicted phosphate ac 97.1 0.0014 3E-08 52.2 6.1 149 54-211 11-180 (412)
71 COG4261 Predicted acyltransfer 94.6 1.7 3.6E-05 33.9 15.4 134 35-187 97-253 (309)
72 TIGR01663 PNK-3'Pase polynucle 64.7 32 0.00069 30.3 7.1 74 84-163 382-455 (526)
73 COG4365 Uncharacterized protei 56.3 29 0.00063 29.4 5.1 56 111-166 70-132 (537)
74 PF13728 TraF: F plasmid trans 48.7 45 0.00097 25.5 4.9 52 112-166 111-162 (215)
75 cd07571 ALP_N-acyl_transferase 46.6 28 0.00061 27.5 3.6 50 113-162 30-80 (270)
76 COG1331 Highly conserved prote 44.0 45 0.00097 30.1 4.7 76 75-150 58-143 (667)
77 cd07197 nitrilase Nitrilase su 43.7 77 0.0017 24.2 5.7 50 113-162 22-84 (253)
78 PRK13703 conjugal pilus assemb 42.3 74 0.0016 25.1 5.2 52 112-166 134-185 (248)
79 COG1929 Glycerate kinase [Carb 40.0 57 0.0012 27.1 4.4 42 121-162 283-324 (378)
80 cd01455 vWA_F11C1-5a_type Von 39.8 1.6E+02 0.0035 22.2 7.0 51 110-162 95-150 (191)
81 COG1623 Predicted nucleic-acid 39.3 69 0.0015 25.9 4.6 92 88-208 67-159 (349)
82 TIGR02739 TraF type-F conjugat 39.0 81 0.0018 24.9 5.0 52 112-166 141-192 (256)
83 PF07293 DUF1450: Protein of u 38.5 24 0.00052 22.3 1.6 27 182-208 48-74 (78)
84 PRK10342 glycerate kinase I; P 34.9 84 0.0018 26.5 4.7 41 121-161 283-323 (381)
85 PRK13669 hypothetical protein; 34.5 57 0.0012 20.7 2.8 29 180-208 46-74 (78)
86 cd07581 nitrilase_3 Uncharacte 33.1 78 0.0017 24.4 4.2 48 113-160 21-80 (255)
87 PRK00745 4-oxalocrotonate taut 32.6 69 0.0015 18.6 3.0 31 182-212 4-34 (62)
88 cd00491 4Oxalocrotonate_Tautom 31.8 80 0.0017 17.9 3.2 31 182-212 3-33 (58)
89 TIGR00045 glycerate kinase. Th 31.7 90 0.002 26.2 4.4 40 121-160 282-321 (375)
90 PRK09932 glycerate kinase II; 31.6 97 0.0021 26.1 4.6 40 122-161 284-323 (381)
91 cd07585 nitrilase_7 Uncharacte 30.0 1.2E+02 0.0027 23.4 4.9 48 115-162 25-83 (261)
92 PRK13305 sgbH 3-keto-L-gulonat 30.0 99 0.0021 23.8 4.1 30 182-211 186-216 (218)
93 cd01018 ZntC Metal binding pro 28.3 2.5E+02 0.0055 22.0 6.4 70 84-161 176-247 (266)
94 TIGR00013 taut 4-oxalocrotonat 27.5 1E+02 0.0023 17.9 3.2 31 182-212 3-34 (63)
95 cd07583 nitrilase_5 Uncharacte 26.4 1.4E+02 0.0031 22.9 4.6 48 113-160 23-80 (253)
96 cd07584 nitrilase_6 Uncharacte 25.8 1.4E+02 0.0031 23.0 4.5 49 113-161 23-85 (258)
97 cd01017 AdcA Metal binding pro 24.7 2.6E+02 0.0056 22.2 5.9 70 84-161 177-250 (282)
98 cd01019 ZnuA Zinc binding prot 24.0 2.5E+02 0.0053 22.4 5.6 71 84-162 185-259 (286)
99 PRK13482 DNA integrity scannin 23.8 3.4E+02 0.0073 22.7 6.3 52 143-209 102-154 (352)
100 PF12708 Pectate_lyase_3: Pect 23.5 89 0.0019 23.3 2.9 30 106-135 15-45 (225)
101 PRK02289 4-oxalocrotonate taut 23.5 1.4E+02 0.0031 17.3 3.2 31 182-212 4-34 (60)
102 cd07573 CPA N-carbamoylputresc 23.0 1.6E+02 0.0035 23.1 4.4 20 114-133 24-43 (284)
103 cd07572 nit Nit1, Nit 2, and r 22.9 2.4E+02 0.0052 21.8 5.3 48 113-160 22-81 (265)
104 KOG2451 Aldehyde dehydrogenase 22.5 4E+02 0.0087 22.8 6.4 46 112-163 177-224 (503)
105 PRK01964 4-oxalocrotonate taut 22.5 1.4E+02 0.003 17.5 3.1 31 182-212 4-34 (64)
106 PF02595 Gly_kinase: Glycerate 22.1 70 0.0015 26.9 2.2 43 121-163 283-325 (377)
107 COG3411 Ferredoxin [Energy pro 21.9 86 0.0019 19.0 1.9 20 115-134 10-29 (64)
108 PRK04270 H/ACA RNA-protein com 21.8 1.4E+02 0.003 24.2 3.8 84 94-198 21-104 (300)
109 PRK02220 4-oxalocrotonate taut 21.4 1.5E+02 0.0033 17.0 3.0 31 182-212 4-34 (61)
110 PRK02079 pyrroloquinoline quin 20.5 71 0.0015 20.7 1.5 16 121-136 20-35 (88)
No 1
>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=100.00 E-value=1.6e-39 Score=248.64 Aligned_cols=214 Identities=79% Similarity=1.268 Sum_probs=194.0
Q ss_pred CeeccceeehhhhhHHHHHHHHHHHHHHHhccCceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHhcCCceeeeecc
Q 028090 1 MLVGHPFVLLLDRYRRKFHHFIAKLWATLTVSPFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLTLGKSFKFISKT 80 (214)
Q Consensus 1 ~~l~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~~~~~~~~~~~~ 80 (214)
+++++|+.+...++++.....+..+|.++....+.+++++|.|++|++++|+|+++||+|++|.+++++..+++.+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~e~lp~~~~p~iiv~NH~S~~D~~~l~~~~~~~~~v~k~ 80 (214)
T PLN02901 1 MLVQHPFVLLFDRYRRKAQHFINKVWATLSTSPFYKIEVEGLENLPSPDEPAVYVSNHQSFLDIYTLFHLGRPFKFISKT 80 (214)
T ss_pred CceEEEEEeeeecccchhhHHHHHHHHHHHhhcceeEEEECCccCCCCCCcEEEEECCCCchHHHHHhhcCCceEEEEEH
Confidence 56889999998888888888888888877666789999999999985467999999999999999887777788999999
Q ss_pred cccccchHHHHHHhcCcEEeecCCchhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEE
Q 028090 81 GIFLFPVIGWAMSMMGVIPLKRMDSRSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPI 160 (214)
Q Consensus 81 ~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv 160 (214)
++++.|+++++++..|+++|+|++.++..++++++.+.+++|.+++|||||+++.++...+|++|++.+|.++++||+|+
T Consensus 81 ~l~~~P~~g~~~~~~~~i~v~R~~~~~~~~~~~~~~~~l~~g~~v~IfPEGtr~~~~~~~~f~~G~~~lA~~~~~pIvPv 160 (214)
T PLN02901 81 SIFLIPIIGWAMYMTGHIPLKRMDRRSQLECLKRCMELLKKGASVFFFPEGTRSKDGKLAAFKKGAFSVAAKTGVPVVPI 160 (214)
T ss_pred HhhhccHHHHHHHHCCcEEEecCCcHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCcccCchhhHHHHHHHcCCCEEEE
Confidence 99999999999999999999998877777889999999999999999999999988888999999999999999999999
Q ss_pred EEeCCCccCcCCCCCCccceeEEEEEcCCCCCCChHHHHHHHHHHHHHHhccCC
Q 028090 161 TLVGTGKIMPSGMEGMLNEGTIKVVIHKPIQGHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 161 ~i~~~~~~~~~~~~~~~~~~~~~v~~g~pi~~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
++.|++..++.+.....++++++|.+++||++++.+++.+++++.|++.+.+.|
T Consensus 161 ~i~g~~~~~~~~~~~~~~~~~i~v~~~~pi~~~~~~~l~~~~~~~i~~~~~~~~ 214 (214)
T PLN02901 161 TLVGTGKIMPNGKEGILNPGSVKVVIHPPIEGSDADELCNEARKVIAESLVQNS 214 (214)
T ss_pred EEecchhhCcCCCcccccCCeEEEEECCCcCCCCHHHHHHHHHHHHHHHhhhcC
Confidence 999999998877544556788999999999999999999999999999988764
No 2
>KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=5.7e-40 Score=245.64 Aligned_cols=209 Identities=37% Similarity=0.611 Sum_probs=183.5
Q ss_pred eeccceeehhhhhHHHHHHHHHHHHHHHhcc-CceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHhc-CCceeeeec
Q 028090 2 LVGHPFVLLLDRYRRKFHHFIAKLWATLTVS-PFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLTL-GKSFKFISK 79 (214)
Q Consensus 2 ~l~~pl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~~-~~~~~~~~~ 79 (214)
+++.|++.+.+ .+...+...+..|.+.... .+.|++++|.|++++ ++|+|+++||+|.+|.+.+... ++++.++++
T Consensus 42 vi~~~v~~l~~-~~~~~n~~~a~~~~~~~~y~~g~r~ev~g~E~L~~-~~p~ViVsNHQS~LDil~m~~i~p~~cvviaK 119 (276)
T KOG2848|consen 42 VIASPVCLLRG-GRSVENHFIAKLWFHSMKYLLGLRFEVRGEENLPK-SKPAVIVSNHQSSLDILGMGSIWPKNCVVIAK 119 (276)
T ss_pred HHhhhheeecc-CCcHHHHHHHHHHHHHHhhhcceEEEEechhhCCc-cCCeEEEecchhHHHHHHHHhhcCCceEEEEe
Confidence 45667777665 5566666677777766665 889999999999997 6799999999999999999765 788999999
Q ss_pred ccccccchHHHHHHhcCcEEeecCCchhHHHHHHHHHHHHhCC-CeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEE
Q 028090 80 TGIFLFPVIGWAMSMMGVIPLKRMDSRSQLECLKRCMELIKKG-ASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVV 158 (214)
Q Consensus 80 ~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~g-~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~iv 158 (214)
++++..|++++.|...|.++++|+++.++.+.++++.+.++++ ..+++||||||+.++.+.|||+|++.+|.++++|||
T Consensus 120 r~L~yvp~~gl~m~L~gvvfIdR~r~~~Ai~~l~~~~~~mkk~~~kvWvFPEGTRn~~g~llPFKKGAF~lAvqaqVPIV 199 (276)
T KOG2848|consen 120 RSLFYVPIFGLAMYLSGVVFIDRSRREKAIDTLDKCAERMKKENRKVWVFPEGTRNKEGRLLPFKKGAFHLAVQAQVPIV 199 (276)
T ss_pred eeeeecchHHHHHHHcCceEEecCCHHHHHHHHHHHHHHHHhCCeeEEEccCCccCCCCcccccccceeeeehhcCCCEE
Confidence 9999999999999999999999999999999999999998876 689999999999999999999999999999999999
Q ss_pred EEEEeCCCccCcCCCCCCccceeEEEEEcCCCCC-----CChHHHHHHHHHHHHHHhccC
Q 028090 159 PITLVGTGKIMPSGMEGMLNEGTIKVVIHKPIQG-----HDAGELCNEARNSIADALGLQ 213 (214)
Q Consensus 159 pv~i~~~~~~~~~~~~~~~~~~~~~v~~g~pi~~-----~~~~~~~~~~~~~i~~~l~~~ 213 (214)
||++++..+.+..... .+..|.+.|++.+||+. +|..+++++++++|.+.+.+-
T Consensus 200 Pvv~ssy~~f~~~~~k-~f~sG~v~V~vL~pI~TeglT~ddv~~L~~~~R~~M~~~~~ei 258 (276)
T KOG2848|consen 200 PVVFSSYGDFYSTKEK-VFNSGNVIVRVLPPIPTEGLTKDDVDVLSDECRSAMLETFKEI 258 (276)
T ss_pred EEEEecccccccCccc-eeecceEEEEEcCCCCccCCCcccHHHHHHHHHHHHHHHHHHh
Confidence 9999988877776654 34458999999999984 578999999999999887764
No 3
>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional
Probab=100.00 E-value=1.4e-36 Score=235.66 Aligned_cols=191 Identities=25% Similarity=0.371 Sum_probs=163.5
Q ss_pred HHHHHHHHHHHHhccCceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHh-cCCceeeeecccccccchHHHHHHhcC
Q 028090 18 FHHFIAKLWATLTVSPFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLT-LGKSFKFISKTGIFLFPVIGWAMSMMG 96 (214)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~-~~~~~~~~~~~~~~~~p~~~~~~~~~g 96 (214)
....+..++.++...++.++++.|.|++|+ ++|+|+++||+|++|.+++.. +.++..+++++++++.|+++++++..|
T Consensus 34 ~~~~~~~~~~~~~~~~g~~v~v~g~e~~p~-~~~~IivaNH~S~lD~~~l~~~~~~~~~fvaK~el~~~P~~g~~~~~~g 112 (245)
T PRK15018 34 HVATFGHMFGRLAPLFGLKVECRKPADAES-YGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTG 112 (245)
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEccCCCCC-CCCEEEEECCCchHHHHHHHHHhCCCcEEEEeHHHhhCCHHHHHHHhCC
Confidence 344455566666667889999999999986 789999999999999988754 456678999999999999999999999
Q ss_pred cEEeecCCchhHHHHHHHHHHHHhC-CCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCC
Q 028090 97 VIPLKRMDSRSQLECLKRCMELIKK-GASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEG 175 (214)
Q Consensus 97 ~~~v~r~~~~~~~~~~~~~~~~l~~-g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~ 175 (214)
+++|+|++.++..++++++.+.+++ |.+++|||||||++++.+.+|++|++++|.++++||+||++.|++..++..
T Consensus 113 ~i~VdR~~~~~~~~~l~~~~~~l~~~g~sv~IFPEGTRs~~g~l~~Fk~Ga~~lA~~~~~PIvPv~i~g~~~~~~~~--- 189 (245)
T PRK15018 113 NLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKINLN--- 189 (245)
T ss_pred CeEEeCCCHHHHHHHHHHHHHHHHhCCCEEEEECCccCCCCCCCCCccHHHHHHHHHcCCCEEEEEEECcccccccC---
Confidence 9999998887788888999888875 678999999999999999999999999999999999999999988766532
Q ss_pred CccceeEEEEEcCCCCCC-----ChHHHHHHHHHHHHHHhcc
Q 028090 176 MLNEGTIKVVIHKPIQGH-----DAGELCNEARNSIADALGL 212 (214)
Q Consensus 176 ~~~~~~~~v~~g~pi~~~-----~~~~~~~~~~~~i~~~l~~ 212 (214)
..++++++|.+|+||+++ |.+++++++++.|++.+++
T Consensus 190 ~~~~g~i~v~~~~PI~~~~~~~~~~~~l~~~v~~~i~~~~~~ 231 (245)
T PRK15018 190 RLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAE 231 (245)
T ss_pred CccCeeEEEEEcCCCcCCCCChhhHHHHHHHHHHHHHHHHHH
Confidence 235689999999999963 4678999999999886654
No 4
>PTZ00261 acyltransferase; Provisional
Probab=99.98 E-value=5.2e-31 Score=209.68 Aligned_cols=165 Identities=22% Similarity=0.362 Sum_probs=133.5
Q ss_pred cCCCCCCCEEEEeCCCCCchHHHHHhcCC-----ceeeeecccccccchHHHHHHhcCcEEeecCCc--------hhHH-
Q 028090 44 NLPSSDTPAVYVSNHQSFLDIYTLLTLGK-----SFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDS--------RSQL- 109 (214)
Q Consensus 44 ~l~~~~~~~i~~~nH~s~~D~~~l~~~~~-----~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~--------~~~~- 109 (214)
++| ++++|+++||+|++|.+++.+... +..+++++++++.|++|++++..|.++|+|+++ ++..
T Consensus 125 nIP--~~~~IivsNHqS~lDi~vl~~~~p~r~~~~~~fVAKkELfkiP~fG~~l~~~G~IPVdR~~~~~g~~~vdrea~~ 202 (355)
T PTZ00261 125 DIS--RHGCAYVGNHTSFWDVYAFIGLTPFRHLLNTRTLMKSSLRKIPIFGGVFDRVGHFPVHFKSDSDGNFEVDKEKQA 202 (355)
T ss_pred cCC--CCCEEEEECCCchHHHHHHHHHcccccccccEEEEHHHHhhccHHHHHHHHCCCeeeecccccccccccchHHHH
Confidence 355 469999999999999998865432 568999999999999999999999999997542 1122
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCeecCCC-CcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCccceeEEEEEcC
Q 028090 110 ECLKRCMELIKKGASVCFFPEGTRSKDG-KLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGMLNEGTIKVVIHK 188 (214)
Q Consensus 110 ~~~~~~~~~l~~g~~~~ifPeG~~~~~~-~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~~~~~~~v~~g~ 188 (214)
..++.+.+.+++|.+++|||||||+.++ .+.+|++|++++|.++++||+|+++.|+++.++.+.....++++++|.||+
T Consensus 203 ~v~~~~~e~Lk~G~sLvIFPEGTRS~~gg~L~pFK~GaF~LAieagvPIVPvai~Gs~~~wP~g~~l~~~pg~I~V~iG~ 282 (355)
T PTZ00261 203 QVQQAIDAHLRLGGSLAFFPEGAINKHPQVLQTFRYGTFATIIKHRMEVYYMVSVGSEKTWPWWMMIGGLPADMHIRIGA 282 (355)
T ss_pred HHHHHHHHHHHCCCEEEEECCcCCcCCCCcCCCCcHHHHHHHHHcCCCEEEEEEeChhhcCCCCCccCCCCceEEEEECC
Confidence 3445556789999999999999999964 589999999999999999999999999999998876444457899999999
Q ss_pred -CCCCC--ChHHHHHHHHHHHHHHh
Q 028090 189 -PIQGH--DAGELCNEARNSIADAL 210 (214)
Q Consensus 189 -pi~~~--~~~~~~~~~~~~i~~~l 210 (214)
||+++ +.+++++++++.|++..
T Consensus 283 ~PI~~~~~~~~eL~~~lr~lmqe~~ 307 (355)
T PTZ00261 283 YPIDYDRDSSKDVAVGLQQRMQKVR 307 (355)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 99864 55666555555555443
No 5
>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences.
Probab=99.97 E-value=1.6e-30 Score=198.76 Aligned_cols=174 Identities=26% Similarity=0.425 Sum_probs=147.5
Q ss_pred CceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHhcCCceeeeecccccccchHHHHHHhcCcEEeecCCchhHHHHH
Q 028090 33 PFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLTLGKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQLECL 112 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~~~ 112 (214)
.+.+++++|.+++| ++++|+++||+|++|.+++.+. .+..+++++++++.|+++++++..|.++|+|++.++..+++
T Consensus 9 ~~~~~~v~g~~~~p--~~~~iiv~NH~S~~D~~~l~~~-~~~~fv~k~el~~~p~~g~~~~~~g~i~v~R~~~~~~~~~~ 85 (211)
T cd07991 9 GFYVIKVHGKPDPP--EAPRIIVANHTSFIDPLILFSD-LFPSIVAKKELGKLPFIGTILRALGCIFVDRSEPKDRKKVV 85 (211)
T ss_pred EEEEEEEECCCCCC--CCCeEEEECCCcHHHHHHHhhh-cCcEEEEehhhccCcHHHHHHHhCCceEEeCCCchhHHHHH
Confidence 45899999999998 5799999999999999999876 66789999999999999999999999999998766666778
Q ss_pred HHHHHHHhC--CCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCC-------------Cc
Q 028090 113 KRCMELIKK--GASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEG-------------ML 177 (214)
Q Consensus 113 ~~~~~~l~~--g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~-------------~~ 177 (214)
+++.+.+++ |.+++||||||++.++.+.+|++|++. +++||+||++.|.....+..+.. ..
T Consensus 86 ~~~~~~~~~~~g~~v~iFPEGtrs~~~~l~~Fk~gaf~----~~~pI~Pv~i~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 161 (211)
T cd07991 86 EEIKERATDPNWPPILIFPEGTTTNGKALIMFKKGAFE----PGVPVQPVAIRYPNKFVDAFWNSSGYSSLMYLFRLLTQ 161 (211)
T ss_pred HHHHHHHhCCCCCeEEEecCccccCCCEEEeecccccc----CCCeeEEEEEEecCccCCcccCCCCccHHHHHHHHhCC
Confidence 888888884 689999999999998899999999864 89999999999875432221110 12
Q ss_pred cceeEEEEEcCCCCC----CChHHHHHHHHHHHHHHhccC
Q 028090 178 NEGTIKVVIHKPIQG----HDAGELCNEARNSIADALGLQ 213 (214)
Q Consensus 178 ~~~~~~v~~g~pi~~----~~~~~~~~~~~~~i~~~l~~~ 213 (214)
.++.++|++++|+++ ++.+++++++++.|++.+...
T Consensus 162 ~~~~v~v~~l~pi~~~~~~~~~~~l~~~v~~~i~~~l~~~ 201 (211)
T cd07991 162 PANVLEVEFLPVYTPSEEGEDPKEFANRVRLIMANKLGLP 201 (211)
T ss_pred cceEEEEEECCCcccccCCCCHHHHHHHHHHHHHHhcCCC
Confidence 357899999999986 478999999999999988653
No 6
>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins.
Probab=99.97 E-value=1.8e-29 Score=191.87 Aligned_cols=176 Identities=26% Similarity=0.478 Sum_probs=140.5
Q ss_pred HHHHhcc-CceeEEEEeeecCCCCCCCEEEEeCCC-CCchHHHHHh-cCCceeeeecccccccchHHHHHHhcCcEEeec
Q 028090 26 WATLTVS-PFLKLEIEGLENLPSSDTPAVYVSNHQ-SFLDIYTLLT-LGKSFKFISKTGIFLFPVIGWAMSMMGVIPLKR 102 (214)
Q Consensus 26 ~~~~~~~-~~~~v~v~g~~~l~~~~~~~i~~~nH~-s~~D~~~l~~-~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r 102 (214)
|.+++.+ .+.+++++|.|++|+ ++|+|+++||+ +++|++++.. ..++..+++++++++.|+++++++..|+++|+|
T Consensus 4 ~~~~~~~~~~~~v~v~G~e~lp~-~~~~I~v~NH~~s~~D~~~l~~~~~~~~~~v~~~~~~~~p~~~~~~~~~g~ipI~r 82 (203)
T cd07992 4 LSRVILRIYFRRITVVGRENVPK-DGPVIFLGNHPNALIDPLLLAATLRRPVRFLAKADLFKNPLIGWLLESFGAIPVYR 82 (203)
T ss_pred ehhehhhhEeeeeEEECCccCCC-CCCEEEEeCCccchhhHHHHHHhcCCCcEEEEEhhhccchHHHHHHHHcCceEeEc
Confidence 3443443 344699999999986 78999999999 5899998864 567889999999999999999999999999998
Q ss_pred CCchh--------HHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHh------CCCcEEEEEEeCCCcc
Q 028090 103 MDSRS--------QLECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAK------TGVPVVPITLVGTGKI 168 (214)
Q Consensus 103 ~~~~~--------~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~------~~~~ivpv~i~~~~~~ 168 (214)
++... ..++++.+.+.+++|.+++|||||+++.++.+.+|++|++++|.+ +++||+|+.+.|....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~l~IFPEGtr~~~~~~~~fk~G~~~lA~~a~~~~~~~vpIvPv~i~~~~~~ 162 (203)
T cd07992 83 PKDLARGGIGKISNAAVFDAVGEALKAGGAIGIFPEGGSHDRPRLLPLKAGAARMALEALEAGQKDVKIVPVGLNYEDKS 162 (203)
T ss_pred CCCcccccccchhHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCccCcCccHHHHHHHHHhcCCCCCeEEeeeEEeCCCC
Confidence 65432 256788999999999999999999999888899999999999985 6999999999876422
Q ss_pred CcCCCCCCccceeEEEEEcCCCCCC------ChHHHHHHHHHHHHHHh
Q 028090 169 MPSGMEGMLNEGTIKVVIHKPIQGH------DAGELCNEARNSIADAL 210 (214)
Q Consensus 169 ~~~~~~~~~~~~~~~v~~g~pi~~~------~~~~~~~~~~~~i~~~l 210 (214)
..++++++.+|+|++++ +..+..+.+.+.+.+.|
T Consensus 163 --------~~~~~i~i~~g~pi~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (203)
T cd07992 163 --------RFRSRVLVEFGKPISVSAFEEAEASRDVEKKLINQLEAEL 202 (203)
T ss_pred --------CCCCeEEEEECCCcccccccccccchhHHHHHHHHHHHhh
Confidence 22478999999999852 23344444555554443
No 7
>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins.
Probab=99.96 E-value=1.2e-28 Score=188.13 Aligned_cols=167 Identities=26% Similarity=0.388 Sum_probs=133.3
Q ss_pred CceeEEEEeeecCCCCCCCEEEEeCCCC-CchHHHHHh----cCCceeeeecccccccchHHHHHHhcCcEEeecCCch-
Q 028090 33 PFLKLEIEGLENLPSSDTPAVYVSNHQS-FLDIYTLLT----LGKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSR- 106 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~~~~~~i~~~nH~s-~~D~~~l~~----~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~- 106 (214)
+.++++++|.|++|+ ++|+|+++||+| .+|++++.+ ......+++++++++.|+++++ .++|+|.+.+
T Consensus 6 ~~~~v~v~G~e~lp~-~g~~iiv~NH~s~~~D~~~l~~~~~~~~~~~~~lak~~l~~~p~l~~~-----~i~v~r~~~~~ 79 (210)
T cd07986 6 VQLEVDVSGLENIPK-DGPVVIVANHPFGILDGLILADLLGSVRPDVRILANQLLSKIPELRDL-----FIPVDPLEGRA 79 (210)
T ss_pred eEEEEecCchhcCCC-CCCEEEEEcCCccchHHHHHHHHHHHhCCCeEEEeHHhhhhCcchHhh-----EEeccCCCCcc
Confidence 346899999999996 789999999987 599987752 3456788999999999988876 4899886654
Q ss_pred ---hHHHHHHHHHHHHhCCCeEEEEeCCeecCCCC------cccccccHHHHHHhCCCcEEEEEEeCCCccCcCC--CC-
Q 028090 107 ---SQLECLKRCMELIKKGASVCFFPEGTRSKDGK------LGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSG--ME- 174 (214)
Q Consensus 107 ---~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~------~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~--~~- 174 (214)
+..++++++.+.|++|.+++|||||+++..+. ..+|++|++++|.++++||+||++.|.+..+.+. ..
T Consensus 80 ~~~~~~~~~~~~~~~L~~G~~l~IFPEGtrs~~~~~~g~~~~~~fk~G~~~lA~~~~~pIvPv~i~g~~~~~~~~~~~~~ 159 (210)
T cd07986 80 ALAKNRESLREALRHLKNGGALIIFPAGRVSTASPPFGRVSDRPWNPFVARLARKAKAPVVPVYFSGRNSRLFYLAGLIH 159 (210)
T ss_pred hhhhhHHHHHHHHHHHhCCCEEEEECCcccccccccCCccccCCccHHHHHHHHHHCCCEEEEEEeeeCcHHHHHHHccC
Confidence 45678899999999999999999999988543 5799999999999999999999999877543221 00
Q ss_pred ------------CCccceeEEEEEcCCCCC------CChHHHHHHHHHH
Q 028090 175 ------------GMLNEGTIKVVIHKPIQG------HDAGELCNEARNS 205 (214)
Q Consensus 175 ------------~~~~~~~~~v~~g~pi~~------~~~~~~~~~~~~~ 205 (214)
...++++++|.+|+||++ +|.+++++.+++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~v~v~~g~pI~~~~~~~~~~~~~l~~~~~~~ 208 (210)
T cd07986 160 PTLRTLLLPRELLNKRGKTIRIRVGRPIPPEELARFEDAEELADFLRLH 208 (210)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEeCCcCCHHHHhcCCCHHHHHHHHHHh
Confidence 112467899999999985 2566777766653
No 8
>PLN02783 diacylglycerol O-acyltransferase
Probab=99.96 E-value=7.9e-28 Score=192.62 Aligned_cols=185 Identities=20% Similarity=0.305 Sum_probs=138.6
Q ss_pred HHHHHHHHHHH-HhccCceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHh------cC-CceeeeecccccccchHH
Q 028090 18 FHHFIAKLWAT-LTVSPFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLT------LG-KSFKFISKTGIFLFPVIG 89 (214)
Q Consensus 18 ~~~~~~~~~~~-~~~~~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~------~~-~~~~~~~~~~~~~~p~~~ 89 (214)
+.+.+.++|.+ ....++.+++++|.|++++ ++++|+++||+|.+|..++.. .. ++..+++++++++.|+++
T Consensus 69 ~~~~~~r~i~~~~~~~~~~~v~v~g~e~l~~-~~~~I~~~nH~S~ldi~~~~~~~~~~~~p~~~~~~lak~~lf~iP~~g 147 (315)
T PLN02783 69 LGRKIARFICKYACAYFPVRLHVEDEEAFDP-NRAYVFGYEPHSVLPIGVIALADLSGFLPLPKIRALASSAVFYTPFLR 147 (315)
T ss_pred HHHHHHHHHHHHHHHhcCeEEEEEchhhCCC-CCCEEEEECCCcchhhHHHhhhhhhhccCCCchHHHhhhhhccCcHHH
Confidence 33344444443 3445678999999999986 789999999999999876421 23 467889999999999999
Q ss_pred HHHHhcCcEEeecCCchhHHHHHHHHHHHHhCCCeEEEEeCCeec-----C--CCCcccccccHHHHHHhCCCcEEEEEE
Q 028090 90 WAMSMMGVIPLKRMDSRSQLECLKRCMELIKKGASVCFFPEGTRS-----K--DGKLGAFKKGAFSVAAKTGVPVVPITL 162 (214)
Q Consensus 90 ~~~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~-----~--~~~~~~~~~g~~~la~~~~~~ivpv~i 162 (214)
++++..|.++++|+ .+.+.+++|.+++|||||++. + +....++++|++++|.++|+||||+++
T Consensus 148 ~~~~~~G~ipv~R~----------~~~~~Lk~G~sv~IfPeGtre~~~~~~~~~~~~~~~k~G~~~lA~~~g~PIVPv~i 217 (315)
T PLN02783 148 HIWTWLGLDPASRK----------NFTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPLVPVFC 217 (315)
T ss_pred HHHHHcCCeEEcHH----------HHHHHHhCCCEEEEEcCCchhhcccCCCccccccCCCCcHHHHHHHcCCCEEEEEE
Confidence 99999999999984 356788899999999999974 2 223468899999999999999999999
Q ss_pred eCCCccCcCCC-----------------------C--CCccceeEEEEEcCCCCCC--------ChHHHHHHHHHHHHHH
Q 028090 163 VGTGKIMPSGM-----------------------E--GMLNEGTIKVVIHKPIQGH--------DAGELCNEARNSIADA 209 (214)
Q Consensus 163 ~~~~~~~~~~~-----------------------~--~~~~~~~~~v~~g~pi~~~--------~~~~~~~~~~~~i~~~ 209 (214)
.|.++.+.... + ..+++.++.+.+|+||+.+ +.++..+++.++++++
T Consensus 218 ~G~~~~~~~~~~~~~~~~~l~r~~~~~p~~~wg~~~~piP~~~~i~vvvG~PI~v~~~~~~~~e~v~~~~~~~~~al~~L 297 (315)
T PLN02783 218 FGQTRAYKWWKPGGPLVPKLSRAIGFTPIVFWGRYGSPIPHRTPMHVVVGKPIEVKKNPQPSQEEVAEVLEQFVEALQDL 297 (315)
T ss_pred ECchhhhhhhcCCccHHHHHHHhcCcCceeeecccCcccCCCceEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 98644432110 0 0223478999999999842 2345566666667766
Q ss_pred hccC
Q 028090 210 LGLQ 213 (214)
Q Consensus 210 l~~~ 213 (214)
.+++
T Consensus 298 ~~~~ 301 (315)
T PLN02783 298 FEKH 301 (315)
T ss_pred HHHH
Confidence 6543
No 9
>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.
Probab=99.96 E-value=5.6e-28 Score=184.93 Aligned_cols=170 Identities=24% Similarity=0.410 Sum_probs=138.9
Q ss_pred CceeE-EEEeeecCCCCCCCEEEEeCCCCCc-hHHHHHhc------CCceeeeecccccccchHHHHHHhcCcEEeecCC
Q 028090 33 PFLKL-EIEGLENLPSSDTPAVYVSNHQSFL-DIYTLLTL------GKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMD 104 (214)
Q Consensus 33 ~~~~v-~v~g~~~l~~~~~~~i~~~nH~s~~-D~~~l~~~------~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~ 104 (214)
.++++ +++|.|++|+ ++++|+++||.|++ |.+++.+. .+++.+++++.++..|+++++++..|.++++|
T Consensus 3 ~~~~~~~v~g~e~lp~-~~~~i~v~NH~s~~~D~~~l~~~~~~~~~~~~~~~la~~~~~~~p~~~~~~~~~g~i~~~r-- 79 (212)
T cd07987 3 KYFRVYEVRGLENIPD-EGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALADHFLFPLPGLRDLLRRLGAVPGSR-- 79 (212)
T ss_pred ceeeeEEEeccccCCC-CCcEEEEECCcchhHHHHHHHHHHHHhCCCCeeEEeecccceeCccHHHHHHHcCCcccCH--
Confidence 35677 9999999996 68999999999998 99988543 25577888999999999999999999999876
Q ss_pred chhHHHHHHHHHHHHhCCCeEEEEeCCeecCC-------CCcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCC---
Q 028090 105 SRSQLECLKRCMELIKKGASVCFFPEGTRSKD-------GKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGME--- 174 (214)
Q Consensus 105 ~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~-------~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~--- 174 (214)
+++.+.|++|.+++|||||+++.. ..+.++++|++++|.++++|||||++.|.++.++....
T Consensus 80 --------~~~~~~L~~G~~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~ 151 (212)
T cd07987 80 --------ENCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRKGFARLALRAGAPIVPVFTFGEEELFRVLGDPDG 151 (212)
T ss_pred --------HHHHHHhcCCCEEEEEcCCHHHHhccCCCeEEEEECCCcCHHHHHHHcCCCeEeEEEeCcHHHHhhhccCCC
Confidence 357778899999999999998642 23678999999999999999999999998887764321
Q ss_pred ----------CCccceeEEEEEcCCCCCC----------ChHHHHHHHHHHHHHHhccC
Q 028090 175 ----------GMLNEGTIKVVIHKPIQGH----------DAGELCNEARNSIADALGLQ 213 (214)
Q Consensus 175 ----------~~~~~~~~~v~~g~pi~~~----------~~~~~~~~~~~~i~~~l~~~ 213 (214)
...++.++.+.+|+||+.. +.+++.+++.++++++++++
T Consensus 152 ~~~~~~~~~l~~p~~~~i~v~~G~Pi~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 210 (212)
T cd07987 152 PVGKRLFRLLPLPRRLPLYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAALRELIEKH 210 (212)
T ss_pred CceeehhceeccCCCCcceEEeCCCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1223468999999999831 34577888888888887764
No 10
>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins.
Probab=99.96 E-value=3.4e-27 Score=172.94 Aligned_cols=145 Identities=28% Similarity=0.352 Sum_probs=115.8
Q ss_pred EEEEeeecCCCCCCCEEEEeCCCCCchHHHHHh----cCCceeeeecccccccchHHHHHHhcCcEEeecCCchhHHHHH
Q 028090 37 LEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLT----LGKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQLECL 112 (214)
Q Consensus 37 v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~----~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~~~ 112 (214)
++++|. +|.+++++|+++||+|++|++++.. ..++..+++++++++.|+ +++++..|.++|+|++.++ ++
T Consensus 10 ~~~~g~--~p~~~~~~iiv~NH~S~~D~~~l~~~~~~~~~~~~~vak~~l~~~p~-g~~~~~~g~i~V~r~~~~~---~~ 83 (163)
T cd07988 10 WRIEGE--PPNKPKFVVIGAPHTSNWDFVLGLLAAFALGLKISFLGKHSLFKPPL-GPFMRWLGGIPVDRSRAGG---LV 83 (163)
T ss_pred EEEEeE--cCCCCceEEEEECCCccHHHHHHHHHHHhcCCceEEEEEHHhhhCcH-HHHHHHcCCEEeEcCCccc---HH
Confidence 344554 5543479999999999999988753 356789999999999999 9999999999999976543 56
Q ss_pred HHHHHHHhCC--CeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCccceeEEEEEcCCC
Q 028090 113 KRCMELIKKG--ASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGMLNEGTIKVVIHKPI 190 (214)
Q Consensus 113 ~~~~~~l~~g--~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~~~~~~~v~~g~pi 190 (214)
+++.+.+++| .+++||||||++.. .+|++|++++|.++++||+||++.|. ..++.||+||
T Consensus 84 ~~~~~~l~~g~~~~l~IFPEGtR~~~---~~fk~G~~~lA~~~~~PIvPv~i~~~---------------~~~v~~g~pi 145 (163)
T cd07988 84 EQVVEEFRRREEFVLAIAPEGTRSKV---DKWKTGFYHIARGAGVPILLVYLDYK---------------RKTVGIGPLF 145 (163)
T ss_pred HHHHHHHHhCCCcEEEEeCCCCCCCC---cChhhHHHHHHHHcCCCEEEEEEecC---------------cEEEEECCcC
Confidence 6666667654 57999999999885 47999999999999999999999753 3589999999
Q ss_pred CCC-ChHHHHHHHHHH
Q 028090 191 QGH-DAGELCNEARNS 205 (214)
Q Consensus 191 ~~~-~~~~~~~~~~~~ 205 (214)
+++ +.++..+++++.
T Consensus 146 ~~~~~~~~~~~~l~~~ 161 (163)
T cd07988 146 EPSGDIEADLAAIRAF 161 (163)
T ss_pred cCCCCHHHHHHHHHHH
Confidence 975 444555555543
No 11
>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]
Probab=99.96 E-value=7.9e-27 Score=183.19 Aligned_cols=164 Identities=40% Similarity=0.712 Sum_probs=138.2
Q ss_pred HHHHHHHHHhccCceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHh-cCCc--eeeeecccccccchHHHHHHhcCc
Q 028090 21 FIAKLWATLTVSPFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLT-LGKS--FKFISKTGIFLFPVIGWAMSMMGV 97 (214)
Q Consensus 21 ~~~~~~~~~~~~~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~-~~~~--~~~~~~~~~~~~p~~~~~~~~~g~ 97 (214)
....++..++...+.+++++|.|++|+ ++++|+++||+|++|++++.. ...+ +.+++++++++.|+++++++..|+
T Consensus 36 ~~~~~~~~~~~~~~~r~~v~G~e~lp~-~~~~ivvaNH~S~~D~~~l~~~~~~~~~~~f~~k~~l~~~p~~g~~~~~~~~ 114 (255)
T COG0204 36 WLRFLVLLLLLLFGLRVEVEGLENLPK-GGPALVVANHQSFLDPLLLSLALPRRGPVRFVAKKELFKVPLLGWLLRLLGA 114 (255)
T ss_pred HHHHHHHHHHHHhCceEEEEeeecCCC-CCCEEEEECchhhhhHHHHhhhcCCCcceEEEeehhhccCchHHHHHHHcCe
Confidence 444445566667889999999999996 699999999999999999864 4444 789999999999999999999999
Q ss_pred EEeecCCchhHHHHHHHHHHHHhC-CCeEEEEeCCeecCC-CCcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCC
Q 028090 98 IPLKRMDSRSQLECLKRCMELIKK-GASVCFFPEGTRSKD-GKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEG 175 (214)
Q Consensus 98 ~~v~r~~~~~~~~~~~~~~~~l~~-g~~~~ifPeG~~~~~-~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~ 175 (214)
++++|.+..+ +++.+..+.+++ |.+++||||||++.+ ....+++.|.+.+|.++++||+|+.+.|.+...+....
T Consensus 115 i~v~r~~~~~--~~~~~~~~~~~~~g~~l~iFPEGtr~~~~~~~~~~k~g~~~~a~~~~~PivPv~i~g~~~~~~~~~~- 191 (255)
T COG0204 115 IPVDRENPDD--ETLRAAVARLKAGGRSLVIFPEGTRSRGGEELLPFKRGAARLALEAGVPIVPVAIVGAEELFPSLKK- 191 (255)
T ss_pred eEecCCCCcH--HHHHHHHHHHHhCCcEEEECCCcCcCCCccccCCCcchHHHHHHHcCCCEEeEEEeCCcccccCCCc-
Confidence 9999977644 456666666666 689999999999996 45899999999999999999999999998877665442
Q ss_pred CccceeEEEEEcCCCCC
Q 028090 176 MLNEGTIKVVIHKPIQG 192 (214)
Q Consensus 176 ~~~~~~~~v~~g~pi~~ 192 (214)
..+.+.+++|+..
T Consensus 192 ----~~~~~~~~~pi~~ 204 (255)
T COG0204 192 ----GKVKVRIGPPIDI 204 (255)
T ss_pred ----eeEEEEecCCcCc
Confidence 2289999999984
No 12
>PLN02833 glycerol acyltransferase family protein
Probab=99.95 E-value=3.5e-26 Score=186.23 Aligned_cols=182 Identities=21% Similarity=0.248 Sum_probs=136.5
Q ss_pred HHHHHhccCceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHhcCCceeeeecccccccch-HHHHHHhcCcEEeecC
Q 028090 25 LWATLTVSPFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLTLGKSFKFISKTGIFLFPV-IGWAMSMMGVIPLKRM 103 (214)
Q Consensus 25 ~~~~~~~~~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~~~~~~~~~~~~~~~~~p~-~~~~~~~~g~~~v~r~ 103 (214)
++..+...+...++++|.++.+ ++++|+++||+|++|.+++.+..+ ..++++++....++ .+++++..|+++|+|+
T Consensus 140 ~~~~~~~~~~~~i~v~G~e~~~--~~~~IiVaNH~S~lDi~vL~s~~p-~~~v~kk~~~~~~~~~~~~~~~~g~I~VdR~ 216 (376)
T PLN02833 140 ICSAFVASWTGVIKYHGPRPSR--RPKQVFVANHTSMIDFIVLEQMTP-FAVIMQKHPGWVGFLQNTILESVGCIWFNRT 216 (376)
T ss_pred HHHHHHHHhEEEEEEECCcCCC--CCCEEEEECCCChHHHHHHHhhcC-ceEEEEehhhhhHHHHHHHHHHcCcEEecCC
Confidence 3333444555668889987655 568999999999999999877543 34566666544444 4578899999999997
Q ss_pred CchhHHHHHHHHHHHHh--CCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCC----C--
Q 028090 104 DSRSQLECLKRCMELIK--KGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGME----G-- 175 (214)
Q Consensus 104 ~~~~~~~~~~~~~~~l~--~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~----~-- 175 (214)
+..+.....+.+.++++ +|.+++||||||+++++.+.+|++|++. .++||+||+|.|........+. .
T Consensus 217 ~~~~~~~~~~~l~~~l~~~~G~~llIFPEGTrs~~~~l~~FK~Gaf~----~g~pI~PVaI~y~~~~~~~fW~s~~~s~~ 292 (376)
T PLN02833 217 EAKDREVVAKKLRDHVQDPDRNPLLIFPEGTCVNNEYTVMFKKGAFE----LGCTVCPIAIKYNKIFVDAFWNSRKQSFT 292 (376)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCcccccchhhHh----cCCeEEEEEEEecCcccccccCCCCccHH
Confidence 76555556677777776 6899999999999999999999999864 6999999999876322111010 0
Q ss_pred -------CccceeEEEEEcCCCCC---CChHHHHHHHHHHHHHHhccC
Q 028090 176 -------MLNEGTIKVVIHKPIQG---HDAGELCNEARNSIADALGLQ 213 (214)
Q Consensus 176 -------~~~~~~~~v~~g~pi~~---~~~~~~~~~~~~~i~~~l~~~ 213 (214)
......++|.+++|++. ++.+++++++++.|++.+...
T Consensus 293 ~~l~~ll~~~~~~v~V~~LpPi~~~~~e~~~efA~rv~~~Ia~~lgi~ 340 (376)
T PLN02833 293 MHLLRLMTSWAVVCDVWYLEPQTLRPGETPIEFAERVRDMIAKRAGLK 340 (376)
T ss_pred HhHHHHhCCCceEEEEEECCCcCCCCCCCHHHHHHHHHHHHHHhcCCC
Confidence 11246799999999974 579999999999999987643
No 13
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.95 E-value=3e-26 Score=203.79 Aligned_cols=178 Identities=23% Similarity=0.248 Sum_probs=143.8
Q ss_pred hccCceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHh-cCCceeeeecccccccchHHHHHHhcCcEEeecCCchhH
Q 028090 30 TVSPFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLT-LGKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQ 108 (214)
Q Consensus 30 ~~~~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~-~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~ 108 (214)
+.+..++++++|.|++|+ ++|+|+++||+|++|++++.+ +..+..+++++++++.|+++++++..|.++|+|++.
T Consensus 9 ~~~~~~~~~v~g~~~~~~-~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~~i~v~r~~~--- 84 (718)
T PRK08043 9 LFRVLYRVRVTGDTQALK-GERVLITPNHVSFLDGILLALFLPVRPVFAVYTSISQQWYMRWLKPYIDFVPLDPTKP--- 84 (718)
T ss_pred HHHHeEEEEEEccccCCC-CCCEEEEECCCchHHHHHHHHhCCCCeEEEEeHHHhhhHHHHHHHHhCCEEEecCCCH---
Confidence 334457888999999986 789999999999999999865 445777899999999999999999999999998653
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCC---CCCccceeEEEE
Q 028090 109 LECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGM---EGMLNEGTIKVV 185 (214)
Q Consensus 109 ~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~---~~~~~~~~~~v~ 185 (214)
.+++++.+.+++|.+++||||||++.++.+.+|++|++.+|.++++||+||+|.|.+....... .......++.+.
T Consensus 85 -~~~~~~~~~l~~g~~~~iFPEGtr~~~~~~~~~k~G~~~~a~~~~~pivPv~i~g~~~~~~~~~~~~~~~~~~~~i~~~ 163 (718)
T PRK08043 85 -MAIKHLVRLVEQGRPVVIFPEGRITVTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLH 163 (718)
T ss_pred -HHHHHHHHHHhCCCEEEEeCCCccCCCCCccCcchHHHHHHHHCCCCEEEEEEECCccCcccccCCccccccCCceEEE
Confidence 3678888999999999999999999988899999999999999999999999998765332211 111223478899
Q ss_pred EcCCCCC---------CChHHHHHHHHHHHHHHhcc
Q 028090 186 IHKPIQG---------HDAGELCNEARNSIADALGL 212 (214)
Q Consensus 186 ~g~pi~~---------~~~~~~~~~~~~~i~~~l~~ 212 (214)
|++|++. ++.+.+.+++++.|.+.+.+
T Consensus 164 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (718)
T PRK08043 164 ILPPTQLPMPDAPRARDRRKLAGEMLHQIMMEARMA 199 (718)
T ss_pred ecCcccCCCCCCccHHHHHHHHHHHHHHHHHHHHhh
Confidence 9998652 13456677788888776654
No 14
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=7e-26 Score=210.19 Aligned_cols=172 Identities=27% Similarity=0.460 Sum_probs=141.0
Q ss_pred HhccCceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHh-cCCceeeeecccccccchHHHHHHhcCcEEeecCCchh
Q 028090 29 LTVSPFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLT-LGKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRS 107 (214)
Q Consensus 29 ~~~~~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~-~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~ 107 (214)
.......+++++|.|++|+ ++|+|+++||+|++|.+++.. +.+++.+++++++++.|+++++++..|+++|+|++
T Consensus 421 ~~~~~~~~~~v~g~e~lp~-~~~~i~~~nH~s~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~--- 496 (1146)
T PRK08633 421 LLMHTRYRLRVEGRENIPA-KGGALLLGNHVSWIDWALLQAASPRPIRFVMERSIYEKWYLKWFFKLFGVIPISSGG--- 496 (1146)
T ss_pred HHHHceEEEEEECCcCCCC-CCCEEEEECCCchHHHHHHHHHcCCCeEEEeeHHhhhChhHHHHHHHCCEEEecCCC---
Confidence 3344567889999999986 789999999999999988864 56678899999999999999999999999999976
Q ss_pred HHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCCccCcC---C----CCCCccce
Q 028090 108 QLECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPS---G----MEGMLNEG 180 (214)
Q Consensus 108 ~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~---~----~~~~~~~~ 180 (214)
..++++.+.+.+++|++++||||||++.++.+.+|++|++++|.++++||+||++.|.+....+ + ......++
T Consensus 497 ~~~~~~~~~~~l~~g~~~~ifPeGt~~~~~~~~~~~~g~~~~a~~~~~~i~pv~~~g~~~~~~~~~~~~~~~~~~~~~~~ 576 (1146)
T PRK08633 497 SKESLEFIRKALDDGEVVCIFPEGAITRNGQLNEFKRGFELIVKGTDVPIIPFYIRGLWGSIFSRASGKFLWRWPTRIPY 576 (1146)
T ss_pred hHHHHHHHHHHHhCCCEEEEECCcCCCCCCCccchhHHHHHHHHHCCCCEEEEEEecccccccccccccccccccCCCCc
Confidence 3457788889999999999999999999989999999999999999999999999886543321 1 11122357
Q ss_pred eEEEEEcCCCCCC-ChHHHHHHHHH
Q 028090 181 TIKVVIHKPIQGH-DAGELCNEARN 204 (214)
Q Consensus 181 ~~~v~~g~pi~~~-~~~~~~~~~~~ 204 (214)
+++|.||+||+++ ..+++.+.+++
T Consensus 577 ~v~v~~~~pi~~~~~~~~~~~~~~~ 601 (1146)
T PRK08633 577 PVTVAFGKPMPAHSTAHEVKQAVFE 601 (1146)
T ss_pred eEEEEECCCcCcccCHHHHHHHHHH
Confidence 8999999999975 34444444443
No 15
>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins.
Probab=99.94 E-value=5.6e-26 Score=170.92 Aligned_cols=176 Identities=19% Similarity=0.269 Sum_probs=140.7
Q ss_pred cCceeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHHHhcCCceeeeecccccccchHHHHHHhcCcEEeecCCchhH
Q 028090 32 SPFLKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTLLTLGKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQ 108 (214)
Q Consensus 32 ~~~~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~ 108 (214)
....+++++|.|++++ .++|+|+++||.|.+|.+++.....++.+++++. ...++++++++..|.++++|++..+.
T Consensus 5 ~~~~~~~v~g~e~l~~~~~~~~~~I~~~~H~s~l~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~g~~~i~r~~~~~~ 83 (189)
T cd07983 5 YLTLRWRVIGDESADALIAQGEPVILAFWHGRLLLMPYLFRRRKRIAALISRS-KDGEIIARVLERLGIRVVRGSSSRGG 83 (189)
T ss_pred eEeEeEEEeCchhhhhhccCCCCEEEEEeCchHHHhHHHhccCCCeEEEEecC-cCHHHHHHHHHHhCCCEEEcCCCCcH
Confidence 4568899999999873 3789999999999999888765556667777654 56788999999999999998777677
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCC--C-ccceeEEEE
Q 028090 109 LECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEG--M-LNEGTIKVV 185 (214)
Q Consensus 109 ~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~--~-~~~~~~~v~ 185 (214)
.++++++.+.+++|..++|||||+++. ..++++|++.+|.++++||+|+++.+.+...+..+.. . ...+++++.
T Consensus 84 ~~~~~~~~~~lk~g~~v~ifpeG~r~~---~~~~~~G~~~lA~~~~~pIvPv~i~~~~~~~~~~~~~~~~p~~~~~~~v~ 160 (189)
T cd07983 84 AAALREMLRALKDGYNIAITPDGPRGP---RYKVKPGVILLARKSGAPIVPVAIAASRAWRLKSWDRFIIPKPFSRVVIV 160 (189)
T ss_pred HHHHHHHHHHHhCCCEEEEcCCCCCCc---ceecchHHHHHHHHhCCCEEEEEEEEEccEeccCccccccCCCCcceEEE
Confidence 789999999999999999999998765 3579999999999999999999998876643332221 1 123679999
Q ss_pred EcCCCCCC--ChHHHHHHHHHHHHHHhc
Q 028090 186 IHKPIQGH--DAGELCNEARNSIADALG 211 (214)
Q Consensus 186 ~g~pi~~~--~~~~~~~~~~~~i~~~l~ 211 (214)
+++|++++ +.++..+++.+.+++.|.
T Consensus 161 ~~~pi~~~~~~~~~~~~~~~~~~~~~~~ 188 (189)
T cd07983 161 FGEPIHVPPDADEEELEEYRLELEAALN 188 (189)
T ss_pred EeCCEeeCCCCCHHHHHHHHHHHHHHhh
Confidence 99999853 225667778888877764
No 16
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases. 1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase.
Probab=99.94 E-value=4e-26 Score=161.53 Aligned_cols=128 Identities=41% Similarity=0.671 Sum_probs=116.0
Q ss_pred ceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHh-cCCceeeeecccccccchHHHHHHhcCcEEeecCCchhHHHHH
Q 028090 34 FLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLT-LGKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQLECL 112 (214)
Q Consensus 34 ~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~-~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~~~ 112 (214)
+.+++++|.+++|+ ++|+|+++||.|++|.++++. ..++..+++++++++.|++++++...|+++++|.+.++..+.+
T Consensus 1 ~~~~~v~g~~~lp~-~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~i~r~~~~~~~~~~ 79 (130)
T TIGR00530 1 GLKVEVVGPENLPA-KSPVLVVANHQSNLDPLTLSAAFPPPIVFIAKKELKWIPFFGIMLWLTGAIFIDRENIRAIATAL 79 (130)
T ss_pred CcEEEEECcccCCC-CCCEEEEECCCchhHHHHHHHHcCCCcEEEEhHHhhhCCHHHHHHHHcCCEEecCCChHHHHHHH
Confidence 46889999999996 789999999999999998754 4557788999998999999999999999999987756666788
Q ss_pred HHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEE
Q 028090 113 KRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITL 162 (214)
Q Consensus 113 ~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i 162 (214)
+++.+.+++|.+++|||||+++..+...+|++|++++|.++++||+|+++
T Consensus 80 ~~~~~~l~~g~~v~ifPeG~~~~~~~~~~f~~g~~~la~~~~~pvvpv~~ 129 (130)
T TIGR00530 80 KAAIEVLKQGRSIGVFPEGTRSRGRDILPFKKGAFHIAIKAGVPILPVVL 129 (130)
T ss_pred HHHHHHHhCCCEEEEeCCCCCCCCCCCCCcchhHHHHHHHcCCCEEeEEe
Confidence 99999999999999999999998888999999999999999999999987
No 17
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.94 E-value=1.7e-25 Score=207.77 Aligned_cols=158 Identities=26% Similarity=0.324 Sum_probs=134.4
Q ss_pred cCceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHh-cCCceeeeecccccccchHHHHHHhcCcEEeecCCchhHHH
Q 028090 32 SPFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLT-LGKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQLE 110 (214)
Q Consensus 32 ~~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~-~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~ 110 (214)
+...+++++|.|++|++++++|+++||+|++|.+++.+ +++++.+++++++.+.|+++++++..|.++++|++. +
T Consensus 436 ~~~~~~~~~g~~~~~~~~~~~i~~~nH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~----~ 511 (1140)
T PRK06814 436 RAFYRVEVKGLENLQKAGKKAVIAANHVSFLDGPLLAAYLPEEPTFAIDTDIAKAWWVKPFLKLAKALPVDPTNP----M 511 (1140)
T ss_pred HHeEEEEEeCCccccccCCCEEEEECCcchHHHHHHHHhCCCCeEEEEeHHHhhhhHHHHHHHhcCeeecCCCCh----H
Confidence 34578999999999964457999999999999999975 455789999999999999999999999999999654 2
Q ss_pred HHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCC---CCCccceeEEEEEc
Q 028090 111 CLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGM---EGMLNEGTIKVVIH 187 (214)
Q Consensus 111 ~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~---~~~~~~~~~~v~~g 187 (214)
.++++.+.+++|++++|||||||+.++.+.+||+|.+++|.++++||+||++.|.+....+.. .....+++++++++
T Consensus 512 ~~~~~~~~l~~g~~~~ifPeGtr~~~~~~~~f~~g~~~~a~~~~~~i~pv~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (1140)
T PRK06814 512 ATRTLIKEVQKGEKLVIFPEGRITVTGSLMKIYDGPGMIADKAGAMVVPVRIDGLQFTHFSRLKNQVRRKWFPKVTVTIL 591 (1140)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCCCCCCccccchHHHHHHHHCCCCEEEEEEcCcccccccccCCCcccccCCceEEEec
Confidence 567888999999999999999999999999999999999999999999999998876543321 11223367999999
Q ss_pred CCCCCC
Q 028090 188 KPIQGH 193 (214)
Q Consensus 188 ~pi~~~ 193 (214)
+|++++
T Consensus 592 ~~i~~~ 597 (1140)
T PRK06814 592 PPVKLA 597 (1140)
T ss_pred CCcccC
Confidence 999753
No 18
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=99.94 E-value=2.3e-25 Score=184.06 Aligned_cols=197 Identities=17% Similarity=0.209 Sum_probs=153.9
Q ss_pred eeccceeehhhhhHHHHHHHHHHHHHHHhc-cCceeEEEEeeecCCCC--CCCEEEEeCCCCCchHHHHH-hcCCceeee
Q 028090 2 LVGHPFVLLLDRYRRKFHHFIAKLWATLTV-SPFLKLEIEGLENLPSS--DTPAVYVSNHQSFLDIYTLL-TLGKSFKFI 77 (214)
Q Consensus 2 ~l~~pl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~g~~~l~~~--~~~~i~~~nH~s~~D~~~l~-~~~~~~~~~ 77 (214)
++++|+.+.+.-.|-.....+.++...... ..+.+++++|.|++|.+ ++++|++|||.|.+|+.++. ++.+++.++
T Consensus 237 ~~w~P~g~~l~~~R~~~~~~lp~~~~~~~~~~~G~~v~V~G~e~~P~~~~~~gvL~v~NH~S~lDp~~l~~al~R~v~~v 316 (498)
T PLN02499 237 LLWIPLGIILAVIRIFVGIMLPMWAIPYVSRIFGGKVIVKGKPPPPASGGNSGVLFVCTHRTLMDPVVLSTVLGRSIPAV 316 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHhcCceEEEEcCCCCCCcCCCCCEEEEeCCCCcccHHHHHHHcCCceeeh
Confidence 466788777666666555555555444433 48899999999999862 26999999999999999885 578888777
Q ss_pred ecccccccchHHHHHHhcCcEEeecCCchhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcE
Q 028090 78 SKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPV 157 (214)
Q Consensus 78 ~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~i 157 (214)
+ +..+.+++++...+.++++|+... +. +.+.+.|++|. ++||||||+++++.+++|++|++.++ +||
T Consensus 317 a----y~~~~ls~ll~~i~avrv~R~r~~-d~---~air~lL~~G~-lvIFPEGTrsreg~LlrFk~l~aela----~pV 383 (498)
T PLN02499 317 T----YSISRLSEILSPIPTVRLTRIRDV-DA---EKIKRELARGD-LVVCPEGTTCREPFLLRFSALFAELT----DRI 383 (498)
T ss_pred H----hhHHHHHHHhcccCeeeecCCchh-HH---HHHHHHhhCCC-EEEcCCCCCCCCCcccccchhhhhhc----Cce
Confidence 6 227788999999999999886432 22 45558899998 99999999999999999999998877 899
Q ss_pred EEEEEeC-----------CCccCcCCCCCCccceeEEEEEcCCCCC-------CChHHHHHHHHHHHHHHhc
Q 028090 158 VPITLVG-----------TGKIMPSGMEGMLNEGTIKVVIHKPIQG-------HDAGELCNEARNSIADALG 211 (214)
Q Consensus 158 vpv~i~~-----------~~~~~~~~~~~~~~~~~~~v~~g~pi~~-------~~~~~~~~~~~~~i~~~l~ 211 (214)
+||++.. .++++..-++.+.++..|+|+|.++++. ++..|+++++|+.+++.|.
T Consensus 384 VPVAI~~~~~~f~gtta~g~k~~Dp~~f~mnP~p~y~v~fL~~~~~~~t~~~g~s~~evan~vQ~~la~~Lg 455 (498)
T PLN02499 384 VPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPVYEVTFLNQLPVEATCSSGKSPHDVANYVQRILAATLG 455 (498)
T ss_pred EeEEEEeccceEEEEcCCCCchhhhhhheecCCceEEEEEcCCCChhhccCCCCChHHHHHHHHHHHHHHhC
Confidence 9999962 2344444444555667899999999984 4678999999999998875
No 19
>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis. Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p
Probab=99.93 E-value=1e-24 Score=163.73 Aligned_cols=167 Identities=31% Similarity=0.429 Sum_probs=135.4
Q ss_pred CceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHhc-----CCceeeeecccccccchHHHHHHhcCcEEeecCCchh
Q 028090 33 PFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLTL-----GKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRS 107 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~~-----~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~ 107 (214)
.+.+++++|.|++|+ ++|+|+++||.|+||+++++.. ..++.+++++.... ...++...|.++++|.+..+
T Consensus 10 ~~~~~~~~g~~~~p~-~~~~i~v~nH~s~~D~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~g~~~i~r~~~~~ 85 (187)
T cd06551 10 GFVRLEVKGPPPPPG-GGPVLFVSNHSSWWDGLILFLLLERGLRRDVYGLMDEELLE---RYPFFTRLGAFSVDRDSPRS 85 (187)
T ss_pred ceEEEEEeccccCCC-CCCEEEEEcchhhHHHHHHHHHHHhccCCCeEEEEcHhhhh---hChHHhhcCeEEecCCChhh
Confidence 568999999999996 7899999999999999888543 25677777776442 33444555999999876655
Q ss_pred HHHHHHHHHHHHhC-CCeEEEEeCCeecCCC-CcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCccceeEEEE
Q 028090 108 QLECLKRCMELIKK-GASVCFFPEGTRSKDG-KLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGMLNEGTIKVV 185 (214)
Q Consensus 108 ~~~~~~~~~~~l~~-g~~~~ifPeG~~~~~~-~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~~~~~~~v~ 185 (214)
..++++.+.+.+++ |.++++||||+++... ...++++|++++|.+++++|+|+++.+.+..+ .+..++++.
T Consensus 86 ~~~~~~~~~~~l~~~g~~v~ifPeG~~~~~~~~~~~~~~g~~~la~~~~~~IvPv~i~~~~~~~-------~~~~~~~i~ 158 (187)
T cd06551 86 AAKSLKYVARLLSKPGSVVWIFPEGTRTRRDKRPLQFKPGVAHLAEKAGVPIVPVALRYTFELF-------EQFPEIFVR 158 (187)
T ss_pred HHHHHHHHHHHHhcCCcEEEEeCCcccCCCCCCcccccchHHHHHHHcCCcEEEEEEecccccc-------CCCCcEEEE
Confidence 66789999999999 9999999999998866 78899999999999999999999998776443 234689999
Q ss_pred EcCCCCCC---ChHHHHHHHHHHHHHHh
Q 028090 186 IHKPIQGH---DAGELCNEARNSIADAL 210 (214)
Q Consensus 186 ~g~pi~~~---~~~~~~~~~~~~i~~~l 210 (214)
+++|+..+ +.++.++++.+.+++.+
T Consensus 159 ~~~pi~~~~~~~~~~~~~~~~~~~~~~~ 186 (187)
T cd06551 159 IGPPIPYAETALGEELAAELANRLTRLL 186 (187)
T ss_pred ECCCccccccccHHHHHHHHHHHHHHhc
Confidence 99999864 44677777777777654
No 20
>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.
Probab=99.93 E-value=5.2e-24 Score=159.47 Aligned_cols=160 Identities=41% Similarity=0.767 Sum_probs=138.1
Q ss_pred CceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHhc-CCceeeeecccccccchHHHHHHhcCcEEeecCCchhHHHH
Q 028090 33 PFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLTL-GKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQLEC 111 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~~-~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~~ 111 (214)
++.+++++|.+.+++ ++++|+++||.++||.++++.. ..+..+++++...+.|+++.+++..|.+++++....+..+.
T Consensus 8 ~~~~v~v~~~~~~~~-~~~~i~~~nH~~~~D~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 86 (184)
T cd07989 8 LGVRVRVEGLENLPP-KGPVIIVANHQSYLDPLVLGAALPRPIRFVAKKELFKIPFLGWLLRLLGAIPIDRGNGRSAREA 86 (184)
T ss_pred eceEEEEEccccCCC-CCCEEEEECCcchHHHHHHHhhccCceEEEEhHHhhhCchHHHHHHHCCeEEEecCCchhHHHH
Confidence 367899999999884 7899999999999999877654 46678888888778999999999999999998765556778
Q ss_pred HHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCccceeEEEEEcCCCC
Q 028090 112 LKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGMLNEGTIKVVIHKPIQ 191 (214)
Q Consensus 112 ~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~~~~~~~v~~g~pi~ 191 (214)
++++.+.+++|+.+++||||+.+..+...+|++|++++|.++++||+|+++.+.+...+++. ....+..+++.+++|++
T Consensus 87 ~~~~~~~l~~g~~l~i~peg~~~~~~~~~~~~~g~~~lA~~~~~~Vvpv~~~~~~~~~~~~~-~~~~~~~~~i~~~~pi~ 165 (184)
T cd07989 87 LREAIEALKEGESVVIFPEGTRSRDGELLPFKSGAFRLAKEAGVPIVPVAISGTWGSLPKGK-KLPRPGRVTVRIGEPIP 165 (184)
T ss_pred HHHHHHHHHCCCEEEEecCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEeChhhhCcCCC-CcCCCCcEEEEEcCCcC
Confidence 89999999999999999999999888889999999999999999999999998877766542 34445689999999999
Q ss_pred CCC
Q 028090 192 GHD 194 (214)
Q Consensus 192 ~~~ 194 (214)
+++
T Consensus 166 ~~~ 168 (184)
T cd07989 166 PEG 168 (184)
T ss_pred hhh
Confidence 765
No 21
>PRK14014 putative acyltransferase; Provisional
Probab=99.93 E-value=3.4e-24 Score=170.98 Aligned_cols=180 Identities=24% Similarity=0.236 Sum_probs=128.0
Q ss_pred cCceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHhcC-C---ceeeeecccccccchHHHHHHhcCcEEeecCCchh
Q 028090 32 SPFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLTLG-K---SFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRS 107 (214)
Q Consensus 32 ~~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~~~-~---~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~ 107 (214)
..+.+++++|.|++++ ++++|+++||+|++|.+++++.. + ...+++++++++.|++|+.+...|.++++|.+..+
T Consensus 70 ~~g~k~~V~G~e~l~~-~~~~IiisNHqS~~D~l~l~~~~~~~~~~~kfv~K~eL~~iP~~G~~~~~~~~ifi~R~~~~~ 148 (301)
T PRK14014 70 LPRTQWDVEGLEGLSK-KGWYLVISNHQSWVDILVLQYVFNRRIPMLKFFLKQELIWVPFLGLAWWALDFPFMKRYSKAY 148 (301)
T ss_pred hCCcEEEEEcCCCCCC-CCCEEEEECCCcHHHHHHHHHHHhhccCceEEEehHHhhhcccHHHHHHHcCCeEEeccchhh
Confidence 4668999999999986 78999999999999999886532 2 35789999999999999999999999999965422
Q ss_pred ----------HHHHHHHHHHHHhC-CCeEEEEeCCeecCCC----------CcccccccHHHHHHhCC----CcEEEEEE
Q 028090 108 ----------QLECLKRCMELIKK-GASVCFFPEGTRSKDG----------KLGAFKKGAFSVAAKTG----VPVVPITL 162 (214)
Q Consensus 108 ----------~~~~~~~~~~~l~~-g~~~~ifPeG~~~~~~----------~~~~~~~g~~~la~~~~----~~ivpv~i 162 (214)
+.++++++.+.+++ |.+++|||||||...+ .++++++|.+.+|.++. .+|+||++
T Consensus 149 ~~~~p~~~~~d~~~~~~a~~~~~~~~~~l~IFPEGTR~t~~k~~~~~~~~~~lL~pk~ggf~~a~~~~~~~~~~I~dvti 228 (301)
T PRK14014 149 LAKNPELKGKDLETTRRACEKFKRMPTTIVNFVEGTRFTPEKHQQQQSPYQHLLKPKAGGIAFALNAMGEQFDGLLDVTI 228 (301)
T ss_pred hhhchhhhhhHHHHHHHHHHHHhcCCcEEEEeccceecCcccccccCCCcccccCCCCccHHHHHHhhhccCCEEEEEEE
Confidence 23445555565554 6789999999996432 56788999999999885 77999999
Q ss_pred eCCCccCcCCCCCCccceeEEEEEcC-CCC---C---CChHHHHHHHHHHHHHHhcc
Q 028090 163 VGTGKIMPSGMEGMLNEGTIKVVIHK-PIQ---G---HDAGELCNEARNSIADALGL 212 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~v~~g~-pi~---~---~~~~~~~~~~~~~i~~~l~~ 212 (214)
.|.+...+..........++.+.+.. |++ . ++.+++.++.++.+.+.+.+
T Consensus 229 ~y~~~~~~~~~~~~g~~~~v~v~i~~~pi~~~~~~~y~~d~~~~~~~~~Wl~~~w~~ 285 (301)
T PRK14014 229 VYPDGRPSFWDLLSGRVKKIVVHVRLLPIPEELIGDYFNDKEFRRRFQQWLNQLWQE 285 (301)
T ss_pred EeCCCCCCHHHhhcCCccEEEEEEEEEEcccccccccccChHHHHHHHHHHHHHHHH
Confidence 98764322122222233445555431 332 1 22344555555555555443
No 22
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT. Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB).
Probab=99.92 E-value=2.8e-24 Score=162.72 Aligned_cols=168 Identities=20% Similarity=0.274 Sum_probs=130.4
Q ss_pred eecCCCCCCCEEEEeCCCCCchHHHHH-hcCCceeeeeccccc-------ccchHHHHHHhcCcEEeecCCc--------
Q 028090 42 LENLPSSDTPAVYVSNHQSFLDIYTLL-TLGKSFKFISKTGIF-------LFPVIGWAMSMMGVIPLKRMDS-------- 105 (214)
Q Consensus 42 ~~~l~~~~~~~i~~~nH~s~~D~~~l~-~~~~~~~~~~~~~~~-------~~p~~~~~~~~~g~~~v~r~~~-------- 105 (214)
.|++++ ++++|+++||+|.+|+.++. .+.+...+++++.++ ..|++++++...|.++|.|.+.
T Consensus 15 ~e~ip~-~~~vIl~sNH~S~~Dp~ii~~~~~r~~~~lAk~~lf~ag~~~~~~pl~~~f~~~~~~~pV~r~k~~~~~P~~~ 93 (235)
T cd07985 15 EEQLAQ-GHNVVLLANHQTEADPAVISLLLEKTHPYLAENMIYVAGDRVVSDPLCKPFSMGRNLLCVHSKKHIDDPPELK 93 (235)
T ss_pred HHhccC-CCCEEEEECCcccccHHHHHHHhccccHHHhhhhheeccccccccHhHHHHHhhCCceeeecCcccccchhhh
Confidence 467786 78999999999999998884 555555555555555 8999999999999999998642
Q ss_pred ----hhHHHHHHHHHHHHhCCCe-EEEEeCCeecCCCCccccccc---------HHHHHHhCCCc--EEEEEEeCCCccC
Q 028090 106 ----RSQLECLKRCMELIKKGAS-VCFFPEGTRSKDGKLGAFKKG---------AFSVAAKTGVP--VVPITLVGTGKIM 169 (214)
Q Consensus 106 ----~~~~~~~~~~~~~l~~g~~-~~ifPeG~~~~~~~~~~~~~g---------~~~la~~~~~~--ivpv~i~~~~~~~ 169 (214)
+.+.++++.+.+.|++|+. ++|||||||++.+....+++| +..+|.++++| |+|+++. +++.+
T Consensus 94 ~~k~~~~~~alk~~~~lLk~G~~~i~IfPEGtR~r~~~~g~~~p~~Fd~~~~~~~~~La~~s~~p~hi~Plai~-~ydi~ 172 (235)
T cd07985 94 EEKMKANLATLKEMQQLLNEGGQLIWVAPSGGRDRPDANGEWYPDPFDPSAVEMMRLLAQKSRVPTHLYPMALL-TYDIM 172 (235)
T ss_pred hhhhhccHHHHHHHHHHHHcCCeEEEEcCCCCCCCCCCCCCccCCccchHHHHHHHHHHHhcCCCceEEeeEEE-eeccc
Confidence 3567899999999999976 889999999985444555555 66899999999 9999998 77777
Q ss_pred cCCCC--------CCccceeEEEEEcCCCCCCC-----------hHHHHHHHHHHHHHHhc
Q 028090 170 PSGME--------GMLNEGTIKVVIHKPIQGHD-----------AGELCNEARNSIADALG 211 (214)
Q Consensus 170 ~~~~~--------~~~~~~~~~v~~g~pi~~~~-----------~~~~~~~~~~~i~~~l~ 211 (214)
|.... +...++.+.+.+|+||..++ .+++++++.+.+.+.+.
T Consensus 173 Ppp~~v~~~ige~r~~~f~~v~i~vg~~i~~~~~~~~~~d~~e~~~~~~~~i~~~v~~~y~ 233 (235)
T cd07985 173 PPPKQVEKEIGEKRAVAFTGVGLAVGEEIDFSAIAATHKDPEEVREAFSKAAFDSVKRLYN 233 (235)
T ss_pred CCCccccccccccccccccceEEEecCCccchhhhcccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 76433 23356789999999998542 23566777777766554
No 23
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=99.92 E-value=3.8e-24 Score=180.24 Aligned_cols=197 Identities=17% Similarity=0.250 Sum_probs=149.2
Q ss_pred eeccceeehhhhhHHHHHHHHHHHHHHHhc-cCceeEEEEeeecCCC--CCCCEEEEeCCCCCchHHHHH-hcCCceeee
Q 028090 2 LVGHPFVLLLDRYRRKFHHFIAKLWATLTV-SPFLKLEIEGLENLPS--SDTPAVYVSNHQSFLDIYTLL-TLGKSFKFI 77 (214)
Q Consensus 2 ~l~~pl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~g~~~l~~--~~~~~i~~~nH~s~~D~~~l~-~~~~~~~~~ 77 (214)
++++|+.+.+.-.|-.+...+...|.+... ..+.+++++|.|++|. +++++|+++||+|.+|++++. ++.+++.++
T Consensus 250 ~~~~p~g~~l~~~r~~~~~~lp~~~~~~~~~~~Gv~v~v~G~e~~p~~~~~~~~l~v~NHqS~lD~~~l~~al~~~~~~v 329 (497)
T PLN02177 250 FLWMPIGFILSLLRVYLNIPLPERIARYNYKLLGIRLIVKGNPPPPPKKGQPGVLFVCNHRTVLDPVVTAVALGRKISCV 329 (497)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCcEEEEEcCCCCCcccCCCCeEEEECCCCcchHHHHHHHcCCCeEEE
Confidence 466788887766666666666666666655 4889999999999874 247999999999999998885 566667777
Q ss_pred ecccccccchHHHHHHhcCcEEeecCCchhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcE
Q 028090 78 SKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPV 157 (214)
Q Consensus 78 ~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~i 157 (214)
+.. ...+++++...++++++|++.++. .++.+.+++| .++||||||+++++.+.+|++|++.++ .||
T Consensus 330 ~~~----~~~l~~~l~~i~~~~ldR~r~~~~----~~~~~lL~~g-~lvIFPEGTrs~~~~l~~Fk~~fa~l~----~pI 396 (497)
T PLN02177 330 TYS----ISKFSELISPIKAVALSREREKDA----ANIKRLLEEG-DLVICPEGTTCREPFLLRFSALFAELT----DRI 396 (497)
T ss_pred eeh----HHHHHHHHHhcCEEEEeCCChHHH----HHHHHHHhcC-CEEECcCcCCCCCCCcchHHHHHHHHC----CcE
Confidence 632 334688899999999999653332 2344666776 689999999999888999999887765 599
Q ss_pred EEEEEeCCCccCcCCC-----------CCCccceeEEEEEcCCCCCC-------ChHHHHHHHHHHHHHHhc
Q 028090 158 VPITLVGTGKIMPSGM-----------EGMLNEGTIKVVIHKPIQGH-------DAGELCNEARNSIADALG 211 (214)
Q Consensus 158 vpv~i~~~~~~~~~~~-----------~~~~~~~~~~v~~g~pi~~~-------~~~~~~~~~~~~i~~~l~ 211 (214)
+||+|.+....+.... +.+.++..++|+|.+|++++ +..|+++++++.|++.+.
T Consensus 397 VPVAI~~~~~~f~~~t~~~~~~~d~~~~~~~p~~~y~V~fL~~l~~~~~~~~~~~~~evAn~Vq~~i~~~lg 468 (497)
T PLN02177 397 VPVAINTKQSMFHGTTVRGYKLLDPYFVFMNPRPTYEITFLNQLPKELTCKGGKSPIEVANYIQRVLAGTLG 468 (497)
T ss_pred EEEEEEcccccccccccccceecchhhhhcCCCceEEEEECCCCChhhcccCCCCHHHHHHHHHHHHHHhhC
Confidence 9999987765544321 12334567999999999854 467999999999998865
No 24
>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function []. This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A.
Probab=99.92 E-value=3.2e-26 Score=162.47 Aligned_cols=127 Identities=44% Similarity=0.846 Sum_probs=80.3
Q ss_pred eEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHhcC-----CceeeeecccccccchHHHHHHhcCcEEeecCCchhHHH
Q 028090 36 KLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLTLG-----KSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQLE 110 (214)
Q Consensus 36 ~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~~~-----~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~ 110 (214)
+++++|.|++++ ++++|+++||+|++|++++..+. ....+++++++...|+++.+++..|.++++|++..+...
T Consensus 1 ~v~v~g~e~l~~-~~~~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~i~r~~~~~~~~ 79 (132)
T PF01553_consen 1 KVEVEGLENLPK-GGGVIFVSNHQSWLDGFALMALLQRSGPRRPRFVAKDELFKIPFLGWFLRRLGFIPIDRSNRKKNRK 79 (132)
T ss_dssp -----HHHHHHT-T-EEEEEE----TTHHHHHHHHHTTT-HHH-EEEEECHHHH-TTTHHHHHEEEEE--CCHHHHHHHH
T ss_pred CCccCccccCCC-CCCEEEEecCCCCCcchheeehhhhhccccceeEeeeccccchhhhhhhhhccceeeeeecccccch
Confidence 578999999997 79999999999999999885432 467889999999999999999999999999966677788
Q ss_pred HHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEe
Q 028090 111 CLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLV 163 (214)
Q Consensus 111 ~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~ 163 (214)
.++.+.+.+++|.+++|||||+++......+|++|++.+|.+++++|+||+++
T Consensus 80 ~~~~~~~~l~~~~~i~ifPEG~~~~~~~~~~~~~G~~~~a~~~~~~ivPv~i~ 132 (132)
T PF01553_consen 80 ALKDIKEILRKGGSIVIFPEGTRSRSGELLPFKKGAFHIALKAKVPIVPVAIS 132 (132)
T ss_dssp HHHHHHHHHHC---EEE-TT-S---B--B----HHHHHHHHHH----------
T ss_pred hHHHHHHHhhhcceeeecCCccCcCCCccCCccHHHHHHHHHcCCccccccCC
Confidence 99999999999999999999999998777999999999999999999999873
No 25
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins.
Probab=99.91 E-value=1.4e-24 Score=165.18 Aligned_cols=144 Identities=29% Similarity=0.421 Sum_probs=114.3
Q ss_pred CCCEEEEeCCCCCchHHHHHhc----CCceeeeecccccccchHHHHHHhcCcEEeecCCchh--HHHHH-HHHHHHHhC
Q 028090 49 DTPAVYVSNHQSFLDIYTLLTL----GKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRS--QLECL-KRCMELIKK 121 (214)
Q Consensus 49 ~~~~i~~~nH~s~~D~~~l~~~----~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~--~~~~~-~~~~~~l~~ 121 (214)
++++|+++||+|++|.+++... ..+..++++++.+..|+++++++..|+++|+|+...+ ....+ +.+.+.+++
T Consensus 21 ~~~~i~v~NH~S~lD~~~l~~~~~~~~~~~~~va~~e~~~~~~~g~~l~~~g~i~I~R~~~~~~~~~~~~~~~~~~~l~~ 100 (205)
T cd07993 21 GHPVVLLPTHRSYLDFLLLSFILFSLGLPLPHIAAGENLNIPILGTLLRRLGAFFIRRSFGKDPLYRAVLQEYVQELLKN 100 (205)
T ss_pred CCCEEEEecCcchhHHHHHHHHHHHCCCCCcEEEEchhhCcHHHHHHHHHCCCEEEecCCCccHHHHHHHHHHHHHHHhC
Confidence 4799999999999999988542 2356788888889999999999999999999976432 23344 457788999
Q ss_pred CCeEEEEeCCeecCCCCcccccccHHHHHHhC-------CCcEEEEEEeCCCccCcC-------C---------------
Q 028090 122 GASVCFFPEGTRSKDGKLGAFKKGAFSVAAKT-------GVPVVPITLVGTGKIMPS-------G--------------- 172 (214)
Q Consensus 122 g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~-------~~~ivpv~i~~~~~~~~~-------~--------------- 172 (214)
|.+++||||||++.++.+.+|+.|++++|.++ +++|+||++.|....... +
T Consensus 101 g~~l~iFPEGtrs~~g~~~~~k~G~~~~a~~~~~~~~~~~v~IvPV~i~Y~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 180 (205)
T cd07993 101 GQPLEFFIEGTRSRTGKLLPPKLGLLSVVVEAYLKGSVPDVLIVPVSISYDRVLEEELYAEELLGPPKPKESLSGLLGAS 180 (205)
T ss_pred CceEEEEcCCCCCCCCCccchHHHHHHHHHHHHhhCCCCCeEEEEeEEeeCcccchHHHHHHHcCCCCCCccHHHHHHHH
Confidence 99999999999999999999999999999987 899999999875421000 0
Q ss_pred CCCCccceeEEEEEcCCCCC
Q 028090 173 MEGMLNEGTIKVVIHKPIQG 192 (214)
Q Consensus 173 ~~~~~~~~~~~v~~g~pi~~ 192 (214)
.....+++++++.|++|++.
T Consensus 181 ~~l~~~~g~v~v~~~~Pi~~ 200 (205)
T cd07993 181 KILRENFGRIRVDFGEPISL 200 (205)
T ss_pred HHhhccCCeEEEECCCCcCH
Confidence 00122358899999999964
No 26
>PRK04974 glycerol-3-phosphate acyltransferase; Validated
Probab=99.90 E-value=5.9e-23 Score=180.62 Aligned_cols=179 Identities=23% Similarity=0.280 Sum_probs=137.2
Q ss_pred hhhHHHHHHHHHHHHHHHhccCceeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHHH-hcCCc---eeeeecccccc
Q 028090 12 DRYRRKFHHFIAKLWATLTVSPFLKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTLL-TLGKS---FKFISKTGIFL 84 (214)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l~-~~~~~---~~~~~~~~~~~ 84 (214)
..++..+.+.+.+++.|++.+++.++++.|.|++++ ++.++|+++||+|.+|++++. .+.+. ..++++.++++
T Consensus 261 ~~~s~~~ir~~~~~l~~~~~~ly~~i~V~g~e~L~~~~~~~~~vI~v~NHrS~lD~llL~~~l~~~gl~~p~iAagenl~ 340 (818)
T PRK04974 261 ADYSYSAIRLADRFLTWLWNRLYQGINVHNAERVRQLAQDGHEIVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLN 340 (818)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHhCceEEcchhhhhhcccCCCCEEEEeCCCCchHHHHHHHHHhhcCCCCceEEehHHhc
Confidence 345566677777777787777777899999999984 356999999999999998884 33332 45667677789
Q ss_pred cchHHHHHHhcCcEEeecCCchhHH--HHHHH-HHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhC-------C
Q 028090 85 FPVIGWAMSMMGVIPLKRMDSRSQL--ECLKR-CMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKT-------G 154 (214)
Q Consensus 85 ~p~~~~~~~~~g~~~v~r~~~~~~~--~~~~~-~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~-------~ 154 (214)
.|+++++++..|+++|+|+.+.+.. ..+++ +...+++|.++.+||||||++++.+.+++.|++.+|.++ +
T Consensus 341 ~p~lg~llr~~GaffIrR~~~~~~ly~~vl~~yi~~ll~~G~~v~iFpEGtRSRtGkllppK~G~l~~a~~a~~~~~~~d 420 (818)
T PRK04974 341 FWPAGPIFRRGGAFFIRRSFKGNKLYSTVFREYLGELFARGYSVEYFVEGGRSRTGRLLQPKTGMLAMTLQAMLRGSRRP 420 (818)
T ss_pred chHHHHHHHHCCceEeeCCCCchHHHHHHHHHHHHHHHhCCCEEEEEcCCCcCCCCCCcchhhhHHHHHHHHhhcccCCC
Confidence 9999999999999999997544332 34444 345778999999999999999999999999999999876 4
Q ss_pred CcEEEEEEeCCCccCcC--------C----CCC----------CccceeEEEEEcCCCC
Q 028090 155 VPVVPITLVGTGKIMPS--------G----MEG----------MLNEGTIKVVIHKPIQ 191 (214)
Q Consensus 155 ~~ivpv~i~~~~~~~~~--------~----~~~----------~~~~~~~~v~~g~pi~ 191 (214)
++||||+|.|.. .+.. + +.. ..+.|++.|.||+|++
T Consensus 421 v~IVPVsIsYek-v~E~~~y~~el~G~~K~kEsl~~il~~i~~~~~~G~v~V~FGePis 478 (818)
T PRK04974 421 ITLVPVYIGYEH-VMEVGTYAKELRGAPKEKESLFQVLRGIRKLRNFGQGYVNFGEPIP 478 (818)
T ss_pred cEEEEEEEeccc-hhhhHHHHHHhcCCCCcCcCHHHHHHHHhhcCCCceEEEEeCCCcc
Confidence 789999996631 1110 0 000 1235899999999997
No 27
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=99.90 E-value=9.7e-23 Score=168.18 Aligned_cols=199 Identities=19% Similarity=0.256 Sum_probs=143.5
Q ss_pred CeeccceeehhhhhHHHHHHHHHHHH-HHHhccCceeEEEEeeecCCC-CCCCEEEEeCCCCCchHHHHH-hcC-Cceee
Q 028090 1 MLVGHPFVLLLDRYRRKFHHFIAKLW-ATLTVSPFLKLEIEGLENLPS-SDTPAVYVSNHQSFLDIYTLL-TLG-KSFKF 76 (214)
Q Consensus 1 ~~l~~pl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~g~~~l~~-~~~~~i~~~nH~s~~D~~~l~-~~~-~~~~~ 76 (214)
+++++|+.+.+.-.|-.+...+...+ ..++..++.++++.|....+. .++|+|++|||+|++|++++. ++. +++.+
T Consensus 276 ~~~wlP~g~~La~~R~~~~~~lP~~~~~~~~~~~Gvrl~v~g~~p~~~~~~~gvI~V~NH~S~LDPi~L~~Al~rr~I~~ 355 (525)
T PLN02588 276 LFMWAPFAAALAAARLVFGLNLPYSLANPFLAFSGIHLTLTVNDLISSDRKKGCLFVCNHRTLLDPLYISYALRKKNIKA 355 (525)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHcCcEEEEEeCCCCCCCCCCCEEEEECCcchhhHHHHHHHcccCcceE
Confidence 35677888877666665554444433 344556888999985543222 257999999999999988774 554 34555
Q ss_pred eecccccccchHHHHHHhcCcEEeecCCchhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCc
Q 028090 77 ISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVP 156 (214)
Q Consensus 77 ~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ 156 (214)
+. +.++.+++++...+.++++|++..+. +++.+.+++|. ++||||||+++++.+.+|++|++.++ .+
T Consensus 356 mt----Fsip~lg~lL~~i~ti~VdRdr~~D~----~aI~~LLk~Gd-lVIFPEGTRsr~g~LlrFk~l~A~la----~~ 422 (525)
T PLN02588 356 VT----YSLSRLSELLAPIKTVRLTRDRVKDG----QAMEKLLSQGD-LVVCPEGTTCREPYLLRFSPLFSEVC----DV 422 (525)
T ss_pred EE----EEhHHHHHHHHhcCceeecCCCcchH----HHHHHHHhCCC-EEEccCccccCCCcccChhhhHHHhc----Cc
Confidence 53 45788999999999999999764332 33456666665 78999999999999999999888876 67
Q ss_pred EEEEEEeCC-----------CccCcCCCCCCccceeEEEEEcCCCCC------------CChHHHHHHHHHHHHHHhcc
Q 028090 157 VVPITLVGT-----------GKIMPSGMEGMLNEGTIKVVIHKPIQG------------HDAGELCNEARNSIADALGL 212 (214)
Q Consensus 157 ivpv~i~~~-----------~~~~~~~~~~~~~~~~~~v~~g~pi~~------------~~~~~~~~~~~~~i~~~l~~ 212 (214)
|+||+|.+. +..++..++.+.+...++|+|.++++. ++..|+++++|..|++.+.-
T Consensus 423 IVPVAI~~~~~~f~gtt~~g~k~~D~~~fl~nP~p~y~V~fL~~v~~~~e~~~~~p~~g~s~~evAn~VQ~~iA~~LG~ 501 (525)
T PLN02588 423 IVPVAIDSHVTFFYGTTASGLKAFDPIFFLLNPFPSYTVQLLDPVSGSSSSTCQDPDNGKLKFEVANHVQHEIGNALGF 501 (525)
T ss_pred eeeEEEEEeccccceeecCCCcccceeEEEecCCceEEEEEcCcCCchhhhcccCcccCCChHHHHHHHHHHHHHhhCc
Confidence 999999742 232233333345567899999999984 12348999999999988753
No 28
>PRK03355 glycerol-3-phosphate acyltransferase; Validated
Probab=99.90 E-value=9e-23 Score=178.08 Aligned_cols=178 Identities=22% Similarity=0.290 Sum_probs=124.9
Q ss_pred hhHHHHHHHHHHHHHHHhccCc-ee--EEEEeeecCCC--CCCCEEEEeCCCCCchHHHHHh-cC----Cceeeeecccc
Q 028090 13 RYRRKFHHFIAKLWATLTVSPF-LK--LEIEGLENLPS--SDTPAVYVSNHQSFLDIYTLLT-LG----KSFKFISKTGI 82 (214)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~-~~--v~v~g~~~l~~--~~~~~i~~~nH~s~~D~~~l~~-~~----~~~~~~~~~~~ 82 (214)
.++....+.+.+ +.|++.+++ .+ +...+.+.+.+ +++|+|+++||+|++|.+++.. +. ....++++.+
T Consensus 226 ~~S~~~ir~~~~-L~r~~~r~y~~~v~v~~~~~~~lr~~~~~~~vV~vpNHrS~lD~lll~~~l~~~gl~~~~i~Ag~~- 303 (783)
T PRK03355 226 GWSRVSVDLVSV-LGRLFSRGFDPEIDYDEYELAALRALLEEHPAVLLFSHRSYIDGLVVPVAMQENRLPPVHVFGGIN- 303 (783)
T ss_pred CCCHHHHHHHHH-HHHHHHHhccccceeCHHHHHHHHhccCCCCEEEEECCCcchHHHHHHHHHhhcCCCCcEEEeHHH-
Confidence 345555555555 556666555 34 44445444332 3789999999999999998843 32 3345555655
Q ss_pred cccchHHHHHHhcCcEEeecCCchhH--HHHHHHHHHHH-hCCCeEEEEeCCeecCCCCcccccccHHHHHH-------h
Q 028090 83 FLFPVIGWAMSMMGVIPLKRMDSRSQ--LECLKRCMELI-KKGASVCFFPEGTRSKDGKLGAFKKGAFSVAA-------K 152 (214)
Q Consensus 83 ~~~p~~~~~~~~~g~~~v~r~~~~~~--~~~~~~~~~~l-~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~-------~ 152 (214)
++.|+++++++..|+++|+|+...+. ...+++..+.+ ++|.++.+||||||++++.+.++|.|+..++. .
T Consensus 304 L~~~~lG~llr~~Ga~fIrR~~~~~~ly~~vl~eyi~~Ll~~G~~v~iFpEGTRSrtGkLl~pK~Gll~~~~~a~~~~~~ 383 (783)
T PRK03355 304 LSFGPMGPIMRRSGMIFIRRNIGDDPLYKYVLREYVGYLVEKRFNLSWYIEGTRSRTGKLLPPKLGLLSYVADAYLDGRS 383 (783)
T ss_pred hccHHHHHHHHHcCcEEecCCCCchHHHHHHHHHHHHHHHhCCCeEEEEecCCCCCCCCCCcccccHHHHHHHHHHhccc
Confidence 46788999999999999999753322 35667766666 57889999999999999999999999977663 5
Q ss_pred CCCcEEEEEEeCCC-------ccCcCCCCC----------------CccceeEEEEEcCCCCC
Q 028090 153 TGVPVVPITLVGTG-------KIMPSGMEG----------------MLNEGTIKVVIHKPIQG 192 (214)
Q Consensus 153 ~~~~ivpv~i~~~~-------~~~~~~~~~----------------~~~~~~~~v~~g~pi~~ 192 (214)
.+++||||+|.|.. .....+... ....+++.|.||+|++.
T Consensus 384 ~~v~IVPV~I~Yd~v~E~~~y~~e~~G~~k~~esl~~~~~~~~~l~~~~~G~i~V~fGePisl 446 (783)
T PRK03355 384 DDVLLQPVSISFDQLHEIGEYAAEARGGEKTPEGLRWLYNYIKAQGERNYGKIYVRFGEPVSM 446 (783)
T ss_pred CCCEEEEEEEEecccccchhHHHHhcCCCcccccHHHHHHHHHHhccCCceeEEEEECCCCCH
Confidence 68999999997432 111111100 12348999999999984
No 29
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase. Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system.
Probab=99.89 E-value=3.7e-22 Score=175.48 Aligned_cols=180 Identities=22% Similarity=0.284 Sum_probs=135.3
Q ss_pred hhhHHHHHHHHHHHHHHHhccCceeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHHH-hcCCc---eeeeecccccc
Q 028090 12 DRYRRKFHHFIAKLWATLTVSPFLKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTLL-TLGKS---FKFISKTGIFL 84 (214)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l~-~~~~~---~~~~~~~~~~~ 84 (214)
..++..+.+.+.+++.+++.+++.++++.|.|++++ ++.|+|+++||+|.+|.+++. .+.+. ..+++....++
T Consensus 251 ~~~S~~~ir~~~~~l~~~~~~ly~~v~V~g~E~l~~~~~~~~pvI~vpNHrS~lD~llL~~~l~~~~l~~p~iaag~nL~ 330 (799)
T TIGR03703 251 ADYSYSLIRFLDRFLTWLWNKLYQGINVNNADRVRKLAQKGHEIIYVPCHRSHMDYLLLSYVLYHEGLVPPHIAAGINLN 330 (799)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHcCceEEechhhcccccCCCCcEEEEECCCCchHHHHHHHHHhhcCCCCceEEechhhc
Confidence 345566777777788888888778899999999975 355999999999999998874 33222 23344444568
Q ss_pred cchHHHHHHhcCcEEeecCCchhH--HHHHH-HHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhC-------C
Q 028090 85 FPVIGWAMSMMGVIPLKRMDSRSQ--LECLK-RCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKT-------G 154 (214)
Q Consensus 85 ~p~~~~~~~~~g~~~v~r~~~~~~--~~~~~-~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~-------~ 154 (214)
.|+++++++..|+++|+|+...+. ...++ .+.+.+++|.++.+||||||+.++.+.+++.|++.++.++ +
T Consensus 331 ~p~~g~llr~~GaffIrR~~~~~~ly~~vl~eyi~~ll~~G~~v~iFpEGtRSrtGkll~pK~G~l~~a~~a~~~~~~~~ 410 (799)
T TIGR03703 331 FWPAGPIFRRGGAFFIRRSFKGNKLYSAVFREYLHELFAKGYSVEYFVEGGRSRTGRLLPPKTGMLAMTLQAMLRGIRRP 410 (799)
T ss_pred cHHHHHHHHHCCceEeecCCCcchhHHHHHHHHHHHHHhCCCEEEEEcCCCcCCCCCccchHHHHHHHHHHHhhccCCCC
Confidence 999999999999999999764332 23343 3556778999999999999999999999999999999776 7
Q ss_pred CcEEEEEEeCCCccCcC--------C--------------CCCCccceeEEEEEcCCCCC
Q 028090 155 VPVVPITLVGTGKIMPS--------G--------------MEGMLNEGTIKVVIHKPIQG 192 (214)
Q Consensus 155 ~~ivpv~i~~~~~~~~~--------~--------------~~~~~~~~~~~v~~g~pi~~ 192 (214)
++||||+|.|.. .+.. + .....+.|++.|.||+||+.
T Consensus 411 v~IVPVsI~Yek-v~E~~~y~~El~G~~K~kEsl~~~l~~~~~l~~~G~i~V~FGePIsl 469 (799)
T TIGR03703 411 ITLVPVYIGYEH-VMEVATYLKELRGKRKEKESVFGVLKTLRKLRNFGQGYVNFGEPINL 469 (799)
T ss_pred cEEEEEEEeccc-ccchhHHHHHhcCCCccccCHHHHHHHHhccCCCceEEEEeCCCccH
Confidence 999999996631 1111 0 00012368999999999974
No 30
>smart00563 PlsC Phosphate acyltransferases. Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family.
Probab=99.88 E-value=1.5e-21 Score=135.40 Aligned_cols=113 Identities=41% Similarity=0.759 Sum_probs=102.6
Q ss_pred EEEEeCCCCCchHHHHHhcCC----ceeeeecccccccchHHHHHHhcCcEEeecCCchhHHHHHHHHHHHHhCCCeEEE
Q 028090 52 AVYVSNHQSFLDIYTLLTLGK----SFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQLECLKRCMELIKKGASVCF 127 (214)
Q Consensus 52 ~i~~~nH~s~~D~~~l~~~~~----~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~g~~~~i 127 (214)
+|+++||.|++|.++++.... +..+++++..++.|+++.++...|.++++|..+++..+.++++.+.+++|.++++
T Consensus 1 ~i~v~NH~s~~D~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~l~~~~~~~i 80 (118)
T smart00563 1 ALVVANHQSFLDPLVLSALLPRKGGRVRFVAKKELFYVPLLGWLLRLLGAIFIDRENGRLARAALREAVRLLRDGGWLLI 80 (118)
T ss_pred CEEEECCCchHHHHHHHHHcccccCceEEEeHHHHhhccHHHHHHHHCCCeEEeCCCcHHHHHHHHHHHHHHhCCCEEEE
Confidence 489999999999999976544 5788999988999999999999999999997776788899999999999999999
Q ss_pred EeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeC
Q 028090 128 FPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVG 164 (214)
Q Consensus 128 fPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~ 164 (214)
||||+++......++++|++++|.+++++|+|+++.|
T Consensus 81 fPeG~~~~~~~~~~~~~g~~~la~~~~~~v~Pv~~~~ 117 (118)
T smart00563 81 FPEGTRSRPGKLLPFKKGAARLALEAGVPIVPVAIRG 117 (118)
T ss_pred eCCcccCCCCCcCCCcccHHHHHHHcCCCEEeEEEec
Confidence 9999999877888999999999999999999999976
No 31
>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins.
Probab=99.85 E-value=1.6e-20 Score=141.49 Aligned_cols=160 Identities=22% Similarity=0.352 Sum_probs=128.8
Q ss_pred eeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHHH-hc-CCceeeeecccccccchHHHHHH----hcCcEEeecCCc
Q 028090 35 LKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTLL-TL-GKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRMDS 105 (214)
Q Consensus 35 ~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l~-~~-~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~~~ 105 (214)
.+++++|.|.+++ .++|+|+++||.++||.+..+ .. ..+..+++++. +.|.++.+++ ..|..+|+++
T Consensus 2 ~~~~i~~~e~l~~~~~~~~~~il~~~H~g~~e~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~r~~~g~~~i~~~-- 77 (192)
T cd07984 2 KRVEREGLEHLEAALAKGKGVILLTAHFGNWELAGLALALLGYPVTVVYRPL--KNPLLDRLITRGRERFGARLIPRG-- 77 (192)
T ss_pred ceeEecCHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhcCCCeeEEEECC--CCHHHHHHHHHHHHhcCCeeEcCC--
Confidence 3677888887753 357999999999999987664 33 45677777764 6677777776 4688888774
Q ss_pred hhHHHHHHHHHHHHhCCCeEEEEeCCeecCCC-Cc-------ccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCc
Q 028090 106 RSQLECLKRCMELIKKGASVCFFPEGTRSKDG-KL-------GAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGML 177 (214)
Q Consensus 106 ~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~-~~-------~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~ 177 (214)
.+++++.+.+++|+.++|||||+++..+ .. .+++.|++.+|.++++||+|+++.+..
T Consensus 78 ----~~~~~~~~~l~~g~~v~i~pD~~~~~~~~~~~~F~G~~~~~~~G~~~lA~~~~~pivp~~~~~~~----------- 142 (192)
T cd07984 78 ----GGLRELIRALKKGEIVGILPDQDPGRKGGVFVPFFGRPAATPTGPARLALKTGAPVVPAFAYRLP----------- 142 (192)
T ss_pred ----chHHHHHHHHhCCCEEEEEeCCCCCCCCCEEeccCCCCccchHHHHHHHHHHCCcEEEEEEEEcC-----------
Confidence 3678899999999999999999998753 33 356999999999999999999996431
Q ss_pred cceeEEEEEcCCCCC---CChHHHHHHHHHHHHHHhccCC
Q 028090 178 NEGTIKVVIHKPIQG---HDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 178 ~~~~~~v~~g~pi~~---~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
++++++.+++|+++ ++.++.++++.+.+++.+++++
T Consensus 143 -~~~~~i~~~~~i~~~~~~~~~~~~~~~~~~lE~~i~~~P 181 (192)
T cd07984 143 -GGGYRIEFEPPLENPPSEDVEEDTQRLNDALEAAIREHP 181 (192)
T ss_pred -CCCEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 46899999999986 5788999999999999988763
No 32
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional
Probab=99.84 E-value=2.3e-20 Score=163.53 Aligned_cols=180 Identities=20% Similarity=0.263 Sum_probs=134.2
Q ss_pred hhHHHHHHHHHHHHHHHhccCceeEEEEe--eecCC----CCCCCEEEEeCCCCCchHHHHH-hcC----Cceeeeeccc
Q 028090 13 RYRRKFHHFIAKLWATLTVSPFLKLEIEG--LENLP----SSDTPAVYVSNHQSFLDIYTLL-TLG----KSFKFISKTG 81 (214)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~g--~~~l~----~~~~~~i~~~nH~s~~D~~~l~-~~~----~~~~~~~~~~ 81 (214)
.++....+++..+..+++.+.+.++++.. .+.+. .++.++|+++||+|.+|.+++. .+. ....++++++
T Consensus 586 ~~S~~~IR~~~~~L~kil~rly~gI~V~~~~lerLr~~e~~p~~pvVfVpNHRS~lDyLLLsyvL~~~GL~~P~IAAGdN 665 (1108)
T PTZ00374 586 NLNHVQCRLFGLMVRRILFRLYDRVSLNSGAFERLHRYVAMPRVAVVLLPLHRSYIDFIIMTYLLAVMGLPLPHVCAGDD 665 (1108)
T ss_pred CccHHHHHHHHHHHHHHHHHhcCCEEECcHHHHHHHHHhcCCCCcEEEEeCCccchHHHHHHHHHHhCCCCceEEEEchh
Confidence 34555667777777777777777888863 55541 1256999999999999998873 332 3446788888
Q ss_pred ccccchHHHHHHhcCcEEeecCCchhHH--HHHHHH-HHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhC-----
Q 028090 82 IFLFPVIGWAMSMMGVIPLKRMDSRSQL--ECLKRC-MELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKT----- 153 (214)
Q Consensus 82 ~~~~p~~~~~~~~~g~~~v~r~~~~~~~--~~~~~~-~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~----- 153 (214)
+++.|+++++++..|+++|+|+.+.+.. ..+++. ...+++|.++.+||||+|++++++.+.|.|+.+++.++
T Consensus 666 LL~~P~LG~LLR~~GAFFIRRsf~~d~LYsAVLreYI~~LLk~G~sVeiFpEGTRSRTGKLLpPK~GlLkmalda~l~g~ 745 (1108)
T PTZ00374 666 FLRMGPIATLMRGSGAFFMRRSFRDDPLYAALFKEYVRHLVLRRRPLEFFIEGTRSRTGKTMAPKLGLLKFICDTFYEGQ 745 (1108)
T ss_pred hhcchHHHHHHHHCCeEEEeCCCCchHHHHHHHHHHHHHHHhCCCeEEEecCcCcCCCCCcccchhhHHHHHHHHHhhcc
Confidence 8999999999999999999997654222 223444 55688999999999999999999999999999998766
Q ss_pred ----CCcEEEEEEeCCCccCcC-------C--CC-------------CCccceeEEEEEcCCCCC
Q 028090 154 ----GVPVVPITLVGTGKIMPS-------G--ME-------------GMLNEGTIKVVIHKPIQG 192 (214)
Q Consensus 154 ----~~~ivpv~i~~~~~~~~~-------~--~~-------------~~~~~~~~~v~~g~pi~~ 192 (214)
+++||||+|.|..-.... + +. ...+.|++.|.||+|++.
T Consensus 746 ~~v~dV~IVPVSIsYErVlE~elyakEl~G~kK~kEsl~~llk~ir~L~~~~GrV~V~FGEPISL 810 (1108)
T PTZ00374 746 QELDDVLIIPVSLSYDELLETTLYAKEQLGVSKPKENPGNLLRARSLLKRRHGKIHVHIGEPVSL 810 (1108)
T ss_pred cCCCCCEEEEEEEehhhhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHHhccCceEEEECCCCccH
Confidence 789999999875211100 0 00 012358999999999983
No 33
>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.84 E-value=5.1e-20 Score=150.16 Aligned_cols=123 Identities=24% Similarity=0.459 Sum_probs=99.4
Q ss_pred CceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHhc------CCceeeeecccccccchHHHHHHhcCcEEeecCCch
Q 028090 33 PFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLTL------GKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSR 106 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~~------~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~ 106 (214)
.+.++++.| |+++. ++++|+++||+|++|+++++.+ ..+..+++|+++++.|++|+.++..|.++++|+...
T Consensus 77 ~gvkv~v~G-e~l~~-~~~~IiiaNH~S~~D~l~l~~l~~r~~~~~~~kfv~K~eL~~iP~~Gw~~~~~g~I~v~R~~~~ 154 (374)
T PLN02510 77 NKTKVVFSG-DKVPP-EERVLLIANHRTEVDWMYLWDLALRKGCLGYIKYVLKSSLMKLPVFGWAFHIFEFIPVERKWEV 154 (374)
T ss_pred cCeEEEEEe-ecCCC-CCcEEEEECCCchHHHHHHHHHHHhcCCCcccEEEEeHHHhhchHHHHHHHHcCCeeeeCCccc
Confidence 678999999 77765 6899999999999999988542 245788999999999999999999999999997543
Q ss_pred hHHHHHHHHHHHHhCC---CeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEE
Q 028090 107 SQLECLKRCMELIKKG---ASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITL 162 (214)
Q Consensus 107 ~~~~~~~~~~~~l~~g---~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i 162 (214)
+.+.++++.+.++++ .+++|||||||...+. +.+..++|.++|+|++...+
T Consensus 155 -D~~~l~~~l~~lk~~~~~~~LvIFPEGTR~t~~~----~~~s~~~A~k~glPil~~vL 208 (374)
T PLN02510 155 -DEPNIRQMLSSFKDPRDPLWLALFPEGTDYTEAK----CQRSQKFAAEHGLPILNNVL 208 (374)
T ss_pred -cHHHHHHHHHHHhccCCCcEEEEeCCcCCCCccc----cchHHHHHHHcCCCcceeEE
Confidence 336777777777754 5799999999976443 35677888888888776665
No 34
>KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism]
Probab=99.82 E-value=4.2e-20 Score=138.33 Aligned_cols=162 Identities=25% Similarity=0.326 Sum_probs=130.3
Q ss_pred HhccCceeEEEEeeecC-------CCCCCCEEEEeCCCCCchHHHHHhcC----------CceeeeecccccccchHHHH
Q 028090 29 LTVSPFLKLEIEGLENL-------PSSDTPAVYVSNHQSFLDIYTLLTLG----------KSFKFISKTGIFLFPVIGWA 91 (214)
Q Consensus 29 ~~~~~~~~v~v~g~~~l-------~~~~~~~i~~~nH~s~~D~~~l~~~~----------~~~~~~~~~~~~~~p~~~~~ 91 (214)
+++....+..++|.|.+ | ++.|.|.|+||.|.+|-..+|+.. -+....+.+-.+.+++.+.+
T Consensus 42 v~~~g~Nk~~v~n~e~l~~l~~~Rp-~n~PLiTVSNH~S~vDDP~~W~~L~~~~f~~~~~~RWtlaAhdICF~n~~~S~f 120 (286)
T KOG2847|consen 42 VLMTGYNKLLVHNRETLTALLESRP-PNRPLITVSNHMSCVDDPLVWGILKLRLFLNLKNIRWTLAAHDICFTNPFHSNF 120 (286)
T ss_pred HHHhcccccccccHHHHHHHHHcCC-CCCCeEEEecchhccCCceeEEEechhhhcchhhhheehhhhhchhccHHHHHH
Confidence 33345678899987754 3 378999999999999866665421 12345566777899999999
Q ss_pred HHhcCcEEeecCCchhHHHHHHHHHHHHhCCCeEEEEeCCeecC-CCCcccccccHHHHHHhCCCc--EEEEEEeCCCcc
Q 028090 92 MSMMGVIPLKRMDSRSQLECLKRCMELIKKGASVCFFPEGTRSK-DGKLGAFKKGAFSVAAKTGVP--VVPITLVGTGKI 168 (214)
Q Consensus 92 ~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~-~~~~~~~~~g~~~la~~~~~~--ivpv~i~~~~~~ 168 (214)
++...++++.|..+ --++.++.+.+.|+.|.++-|||||..+. +....+||.|+.+++.++..+ |+|++..|.++.
T Consensus 121 FslGkclPi~RG~G-vYQ~gmd~~i~kLn~g~WVHiFPEGkV~q~~~~~~rfKWGigRlI~ea~~~PIVlPi~h~Gmedi 199 (286)
T KOG2847|consen 121 FSLGKCLPIVRGEG-VYQKGMDFAIEKLNDGSWVHIFPEGKVNQMEKEMLRFKWGIGRLILEAPKPPIVLPIWHTGMEDI 199 (286)
T ss_pred HhcCceEeeeccCc-cccccHHHHHHhcCCCCeEEECCCceeeccccchhheeccceeeeecCCCCCEEeehhhhhHHHh
Confidence 99999999999543 45678999999999999999999999985 677899999999999888644 789999999999
Q ss_pred CcCCCCCCc-cceeEEEEEcCCCCC
Q 028090 169 MPSGMEGML-NEGTIKVVIHKPIQG 192 (214)
Q Consensus 169 ~~~~~~~~~-~~~~~~v~~g~pi~~ 192 (214)
+|....... ...+++|.+|+|+..
T Consensus 200 ~P~~~p~vp~~Gk~vtV~IG~P~~~ 224 (286)
T KOG2847|consen 200 MPEAPPYVPRFGKTVTVTIGDPINF 224 (286)
T ss_pred CccCCCccCCCCCEEEEEeCCCcch
Confidence 998733333 346899999999984
No 35
>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=99.80 E-value=4.1e-18 Score=138.98 Aligned_cols=182 Identities=23% Similarity=0.241 Sum_probs=120.5
Q ss_pred HHHHHHhc----cCceeEEEEeeecCCC--CCCCEEEEeCCCCCchHHHHHhc------CCceeeeecccccccchHHHH
Q 028090 24 KLWATLTV----SPFLKLEIEGLENLPS--SDTPAVYVSNHQSFLDIYTLLTL------GKSFKFISKTGIFLFPVIGWA 91 (214)
Q Consensus 24 ~~~~~~~~----~~~~~v~v~g~~~l~~--~~~~~i~~~nH~s~~D~~~l~~~------~~~~~~~~~~~~~~~p~~~~~ 91 (214)
..|.++.. ..++++++.|.+...+ .++++|+++||+|++|.++++.+ ..+..+++++++...|++|+.
T Consensus 52 ~~w~~~~~l~~~~~Gvkv~V~gd~~~~~~~g~e~~lIisNHqS~~D~l~l~~l~~r~~~l~~~~~vlKkeL~~iPv~Gw~ 131 (376)
T PLN02380 52 LLWLELIWLVDWWAGVKVQLYADEETFELMGKEHALVISNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWS 131 (376)
T ss_pred HHHHHHHHHHHHcCCeEEEEEecchhhccCCCCcEEEEECCChhHHHHHHHHHhhhcccccceeEeeHHHhhhccHHHHH
Confidence 35565443 4678999998654321 25689999999999999988654 344688999999999999999
Q ss_pred HHhcCcEEeecCCchhHHHHHHHHHHHHhC---CCeEEEEeCCeecCCCCc-------------------ccccccHHHH
Q 028090 92 MSMMGVIPLKRMDSRSQLECLKRCMELIKK---GASVCFFPEGTRSKDGKL-------------------GAFKKGAFSV 149 (214)
Q Consensus 92 ~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~---g~~~~ifPeG~~~~~~~~-------------------~~~~~g~~~l 149 (214)
+...|.++++|+..++ .+.+++..+.+++ +.+++|||||||...+.. .|-.+|....
T Consensus 132 ~~~~~~IfIdR~~~~d-~~~l~~~~~~l~~~~~~~wllIFPEGTR~~~~k~~~s~~fA~~~glP~l~hvL~PRt~Gf~~~ 210 (376)
T PLN02380 132 MWFSEYVFLERSWAKD-ENTLKSGFQRLKDFPRPFWLALFVEGTRFTQAKLLAAQEYAASRGLPVPRNVLIPRTKGFVSA 210 (376)
T ss_pred HHHcCCEEecCCchhH-HHHHHHHHHHHhhCCCccEEEEecCcCCCCchhhHHHHHHHHHcCCCCcccccCcccccHHHH
Confidence 9999999999976654 5778888888886 788999999999875532 2334555443
Q ss_pred HHhC--CCc-EEEEEEeCCCccC-cCCC-CCCccceeEEEEEcC-CCC--CCChHHHHHHHHHHH
Q 028090 150 AAKT--GVP-VVPITLVGTGKIM-PSGM-EGMLNEGTIKVVIHK-PIQ--GHDAGELCNEARNSI 206 (214)
Q Consensus 150 a~~~--~~~-ivpv~i~~~~~~~-~~~~-~~~~~~~~~~v~~g~-pi~--~~~~~~~~~~~~~~i 206 (214)
.... .++ |+-+++.|.+..- |... .....+..+.+.+-. |++ |++.+++++=+++..
T Consensus 211 l~~L~~~~~aiyDvTi~y~~~~~~psl~~il~g~p~~v~v~vrr~pi~~iP~~~~~~~~WL~~~w 275 (376)
T PLN02380 211 VSNMRSFVPAIYDVTVAVPKGQPAPTMLRIFRGQSSVVHVHIKRHSMKELPETDDGIAQWCKDVF 275 (376)
T ss_pred HHHhhhcccEEEEEEEEecCCCCCccHHHHhCCCCeEEEEEEEEEECCcCcCcHHHHHHHHHHHH
Confidence 3332 223 7777887644321 1111 011123345555542 343 455555555555544
No 36
>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins.
Probab=99.79 E-value=4.3e-18 Score=128.44 Aligned_cols=124 Identities=28% Similarity=0.349 Sum_probs=97.7
Q ss_pred CceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHhcC------CceeeeecccccccchHHHHHHhcCcEEeecCCch
Q 028090 33 PFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLTLG------KSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSR 106 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~~~------~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~ 106 (214)
.+++++++|.+++++ ++++|+++||+|++|+++++++. ....+++++++++.|++++++...|.++++|+..
T Consensus 8 ~g~~i~v~G~~~~~~-~~~~iiv~NH~s~~D~~~~~~~~~~~~~~~~~~~v~K~~l~~~p~~g~~~~~~~~i~v~R~~~- 85 (193)
T cd07990 8 SGVKVVVYGDEPKLP-KERALIISNHRSEVDWLVLWMLADRFGRLGRLKIVLKDSLKYPPLGGWGWQLGEFIFLKRKWE- 85 (193)
T ss_pred cCeEEEEEecCccCC-CccEEEEEcCCcccCHHHHHHHHHHcCccceEEeeehhhhhcCChhhHHHhhCeeEEEECChH-
Confidence 568999999999854 68999999999999999886542 3578999999999999999999999999999653
Q ss_pred hHHHHHHHHHHHHhC---CCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEE
Q 028090 107 SQLECLKRCMELIKK---GASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITL 162 (214)
Q Consensus 107 ~~~~~~~~~~~~l~~---g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i 162 (214)
.+.+.+++..+.+++ |.+++||||||+...+...+.+ .+|.+.++|++.-.+
T Consensus 86 ~d~~~i~~~~~~l~~~~~~~~lviFPEGTr~~~~~~~~~~----~~a~k~~~p~l~~vL 140 (193)
T cd07990 86 KDEKTIKRQLKRLKDSPEPFWLLIFPEGTRFTEEKKERSQ----EFAEKNGLPPLKHVL 140 (193)
T ss_pred HhHHHHHHHHHHHhcCCCCcEEEEeCcccCCCHHHHHHHH----HHHHHcCCCCcceee
Confidence 345667777777776 7899999999998865443222 556666666665554
No 37
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.78 E-value=1.5e-17 Score=121.76 Aligned_cols=182 Identities=18% Similarity=0.268 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHHhcc--CceeEEEEeeec--CCCCCCCEEEEeCCCCCchHHHHHhcCCceeeeecccccccchHHHH
Q 028090 16 RKFHHFIAKLWATLTVS--PFLKLEIEGLEN--LPSSDTPAVYVSNHQSFLDIYTLLTLGKSFKFISKTGIFLFPVIGWA 91 (214)
Q Consensus 16 ~~~~~~~~~~~~~~~~~--~~~~v~v~g~~~--l~~~~~~~i~~~nH~s~~D~~~l~~~~~~~~~~~~~~~~~~p~~~~~ 91 (214)
+.+..++..++.++++. ..++.+..+.+. +.. ++|+|+.+||.-..=....+-..++ .+++-++..+..++..+
T Consensus 9 ~~v~~~l~~l~~~ylrlv~~T~r~~~~~~~~~~~~~-~~p~I~afWHg~l~l~p~~~~~~~~-~~amvS~s~DGEliA~~ 86 (214)
T COG2121 9 KFVISILTSLLYGYLRLVYLTSRWKAGGADNNALAN-EKPGIVAFWHGQLALGPFAFPKGKK-IYAMVSPSRDGELIARL 86 (214)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHhhhhhhcchhhc-cCCeEEEEeccccccchhhccCCCc-EEEEEcCCcCHHHHHHH
Confidence 34555555555555552 335555555444 543 7899999999965444433333344 66677778899999999
Q ss_pred HHhcCcEEeecCCchhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCCccCcC
Q 028090 92 MSMMGVIPLKRMDSRSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPS 171 (214)
Q Consensus 92 ~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~ 171 (214)
+..+|...|..+..+++..++.++.+.|++|.+++|.|||..++ ......|+..+|+++++||+|+.+..+.-+..+
T Consensus 87 l~kfG~~~IRGSs~Kgg~~Alr~l~k~Lk~G~~i~itpDgPkGp---~~~~~~Gii~LA~~sg~pi~pv~~~~sr~~~lK 163 (214)
T COG2121 87 LEKFGLRVIRGSSNKGGISALRALLKALKQGKSIAITPDGPKGP---VHKIGDGIIALAQKSGVPIIPVGVATSRCWRLK 163 (214)
T ss_pred HHHcCceEEeccCCcchHHHHHHHHHHHhCCCcEEEcCCCCCCC---ceeccchhhHhhHhcCCCeEEEEEeeeeeeeec
Confidence 99999999999999999999999999999999999999998866 467789999999999999999999876633333
Q ss_pred CCC---CCccceeEEEEEcCCCCC---CChHHHHHHH
Q 028090 172 GME---GMLNEGTIKVVIHKPIQG---HDAGELCNEA 202 (214)
Q Consensus 172 ~~~---~~~~~~~~~v~~g~pi~~---~~~~~~~~~~ 202 (214)
.|. .+.+++++.+..|+|+.. ++.+++.++.
T Consensus 164 sWDk~~IP~PFgk~~i~~gePi~~~~D~~~~~l~~~~ 200 (214)
T COG2121 164 TWDKTIIPLPFGKIKIVLGEPIEVDADKDKEELEEKR 200 (214)
T ss_pred ccccccccCccceeEEEecCceeecccccHHHHHHHH
Confidence 332 245679999999999984 2444444433
No 38
>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed
Probab=99.72 E-value=8.1e-17 Score=137.21 Aligned_cols=144 Identities=19% Similarity=0.158 Sum_probs=104.4
Q ss_pred CCCEEEEeCCCCCchHHHHHh-cC---CceeeeecccccccchHHHHHHhcCcEEeecCCchhH--HHHH-HHHHHHHhC
Q 028090 49 DTPAVYVSNHQSFLDIYTLLT-LG---KSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQ--LECL-KRCMELIKK 121 (214)
Q Consensus 49 ~~~~i~~~nH~s~~D~~~l~~-~~---~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~--~~~~-~~~~~~l~~ 121 (214)
+.|+|+++||.|++|.+++.. +. ....+++.....+.+.++.+++..|++++.|+.+.+. ...+ +.+...+++
T Consensus 114 ~~pvIfvp~HrS~lDylllsyvL~~~~l~~~~~~ag~nl~~~~lg~~lr~~GafFirRsf~~~~LY~~vl~eYi~~ll~~ 193 (621)
T PRK11915 114 KATLAFAFSHRSYLDGMLLPEVILANRLSPALTFGGANLNFFPMGAWAKRTGAIFIRRQTKDIPVYRFVLRAYAAQLVQN 193 (621)
T ss_pred CCCEEEEeccccccHHHHHHHHHHHcCCCCceeehhhhhcchhHHHHHHhCCcEEeccCCCCchHHHHHHHHHHHHHHhC
Confidence 789999999999999988742 21 2234444445557777999999999999998765433 1345 566678889
Q ss_pred CCeEEEEeCCeecCCCCcccccccHHHHHH-------hCCCcEEEEEEeCCCccCcC-------CCC-------------
Q 028090 122 GASVCFFPEGTRSKDGKLGAFKKGAFSVAA-------KTGVPVVPITLVGTGKIMPS-------GME------------- 174 (214)
Q Consensus 122 g~~~~ifPeG~~~~~~~~~~~~~g~~~la~-------~~~~~ivpv~i~~~~~~~~~-------~~~------------- 174 (214)
|.++.+||||+|+.++++.+.+-|...+.. ..+++|+||+|.|..-.-.. +..
T Consensus 194 G~~le~F~EG~RSRtGkll~Pk~GlLs~vv~~~~~~~~~dV~iVPVsI~YDrV~E~~~y~~El~G~~K~~Esl~~l~~~~ 273 (621)
T PRK11915 194 HVNLTWSIEGGRTRTGKLRPPVFGILRYITDAVDEIDGPEVYLVPTSIVYDQLHEVEAMTTEAYGAVKRPEDLRFLVRLA 273 (621)
T ss_pred CCcEEEEeCCCCCCCCCCCCCchhhHHHHHHHHhcCCCCCeEEEEEEEeecccccHHHHHHHhcCCCCCccHHHHHHHHH
Confidence 999999999999999999997888766543 34789999999764211100 000
Q ss_pred --CCccceeEEEEEcCCCCC
Q 028090 175 --GMLNEGTIKVVIHKPIQG 192 (214)
Q Consensus 175 --~~~~~~~~~v~~g~pi~~ 192 (214)
...+.|++.|.||+|++.
T Consensus 274 ~~l~~~~G~i~V~FgePisL 293 (621)
T PRK11915 274 RQQGERLGRAYLDFGEPLPL 293 (621)
T ss_pred HHHhhcCceEEEECCCCccH
Confidence 011357999999999983
No 39
>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed
Probab=99.63 E-value=1.7e-14 Score=115.93 Aligned_cols=162 Identities=14% Similarity=0.234 Sum_probs=119.4
Q ss_pred CceeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHH-Hhc-CCceeeeecccccccchHHHHHH----hcCcEEeecC
Q 028090 33 PFLKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTL-LTL-GKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRM 103 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l-~~~-~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~ 103 (214)
+..+++++|.|+++. .++|+|++++|.++||.+.. ++. ..++..++++. ++|.++.++. ..|...+...
T Consensus 93 ~~~~v~i~g~e~l~~a~~~g~gvI~~t~H~GnwE~~~~~l~~~~~~~~~v~~~~--~n~~~~~~~~~~R~~~g~~~i~~~ 170 (298)
T PRK08419 93 ILNKVTFINEENLLDALKKKRPIIVTTAHYGYWELFSLALAAYYGAVSIVGRLL--KSAPINEMISKRREQFGIELIDKK 170 (298)
T ss_pred hcCcEEEECHHHHHHHHHcCCCEEEEeeCccHHHHHHHHHHhcCCCeEEEEeCC--CChHHHHHHHHHHHHcCCeeEECc
Confidence 335789999988763 37899999999999999765 333 34677777764 5677766654 5566555321
Q ss_pred CchhHHHHHHHHHHHHhCCCeEEEEeCCeecC-CCCcc-------cccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCC
Q 028090 104 DSRSQLECLKRCMELIKKGASVCFFPEGTRSK-DGKLG-------AFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEG 175 (214)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~-~~~~~-------~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~ 175 (214)
.+++.+.++|++|+.++++||+..+. ++... .+..|++.+|.++++||+|+++...
T Consensus 171 ------~~~r~~l~~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~~~~g~a~LA~k~~apvvpv~~~~~---------- 234 (298)
T PRK08419 171 ------GAMKELLKALKQGRALGILVDQNVVPKEGVEVKFFNKRVTHTTIASILARRYNALIIPVFIFND---------- 234 (298)
T ss_pred ------cHHHHHHHHHHcCCeEEEEecCCCCCCCCeEEecCCCCcccchhHHHHHHHHCCCEEEEEEEEC----------
Confidence 25789999999999999999987653 34433 4589999999999999999999421
Q ss_pred CccceeEEEEEcCCCCCC-------ChHHHHHHHHHHHHHHhccCC
Q 028090 176 MLNEGTIKVVIHKPIQGH-------DAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 176 ~~~~~~~~v~~g~pi~~~-------~~~~~~~~~~~~i~~~l~~~~ 214 (214)
..+.+++.+++|++.+ +..+.++++.+.+++.+++++
T Consensus 235 --~~~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~lE~~Ir~~P 278 (298)
T PRK08419 235 --DYSHFTITFFPPIRSKITDDAEADILEATQAQASACEEMIRKKP 278 (298)
T ss_pred --CCCeEEEEEcCCccCCCCCChHHHHHHHHHHHHHHHHHHHHhCc
Confidence 1246899999988631 345667788888888877653
No 40
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.58 E-value=1.3e-13 Score=109.96 Aligned_cols=162 Identities=20% Similarity=0.340 Sum_probs=128.5
Q ss_pred eeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHHH--hcCCceeeeecccccccchHHHHHH----hcCcEEeecCCc
Q 028090 35 LKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTLL--TLGKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRMDS 105 (214)
Q Consensus 35 ~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l~--~~~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~~~ 105 (214)
.+++++|.|++.+ .++|+|+++.|.++||....+ .....+..+++.. ++|.+++++. ..|.-.+.++.
T Consensus 105 ~~~~v~g~e~l~e~l~~~~gvIl~~~H~gn~E~~~~~l~~~~~~~~~~yrp~--~np~ld~~i~~~R~r~~~~~~~~~~- 181 (308)
T COG1560 105 RRVEVEGLEHLEEALANGRGVILVTPHFGNWELGGRALAQQGPKVTAMYRPP--KNPLLDWLITRGRERFGGRLLPRKG- 181 (308)
T ss_pred ceeeecCHHHHHHHHHcCCCEEEEecCcchHHHHHHHHHHhCCCeeEEecCC--CCHHHHHHHHHHHHhcCCcccCCCc-
Confidence 5689999988754 478999999999999987764 3445556666664 8888888776 45555555532
Q ss_pred hhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCC-cccc-------cccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCc
Q 028090 106 RSQLECLKRCMELIKKGASVCFFPEGTRSKDGK-LGAF-------KKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGML 177 (214)
Q Consensus 106 ~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~-~~~~-------~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~ 177 (214)
+.++.+.++|++|+.+.+-||...++... ..+| .+|+++||++++++|+|+++.. ..
T Consensus 182 ----~~ir~li~~Lk~G~~v~~lpDqd~~~~~~vfvpFFg~~a~T~t~~~~LA~~~~a~vip~~~~r-----------~~ 246 (308)
T COG1560 182 ----EGIRQLIKALKQGEAVGYLPDQDYGPGESVFVPFFGVPAATTTGPAKLARLTGAAVVPVFPVR-----------NP 246 (308)
T ss_pred ----hhHHHHHHHHhcCCeEEEecCcccCCCCCeEeccCCCcccccchHHHHHHHhCCCEEEEEEEE-----------eC
Confidence 36899999999999999999999988554 4555 7999999999999999999952 23
Q ss_pred cceeEEEEEcCCCC---CCChHHHHHHHHHHHHHHhccCC
Q 028090 178 NEGTIKVVIHKPIQ---GHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 178 ~~~~~~v~~g~pi~---~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
..+++++.+.+|.+ .+|.++.++++++.+++.+.+++
T Consensus 247 ~g~~y~l~i~p~~~~~~~~D~~~~a~~mn~~~E~~I~~~P 286 (308)
T COG1560 247 DGSGYTLHIHPPMTDDPSEDVEADAQRMNDFVEKWIRAHP 286 (308)
T ss_pred CCCeEEEEEeccccCCCCCCHHHHHHHHHHHHHHHHHcCh
Confidence 34689999999776 36889999999999999887653
No 41
>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=99.54 E-value=1.1e-13 Score=111.24 Aligned_cols=163 Identities=17% Similarity=0.251 Sum_probs=118.3
Q ss_pred eeEEE--EeeecCCC---CCCCEEEEeCCCCCchHHHHH-h-cCCceeeeecccccccchHHH----HHHhcCcEEeecC
Q 028090 35 LKLEI--EGLENLPS---SDTPAVYVSNHQSFLDIYTLL-T-LGKSFKFISKTGIFLFPVIGW----AMSMMGVIPLKRM 103 (214)
Q Consensus 35 ~~v~v--~g~~~l~~---~~~~~i~~~nH~s~~D~~~l~-~-~~~~~~~~~~~~~~~~p~~~~----~~~~~g~~~v~r~ 103 (214)
.++++ +|.|++.+ .++|+|+++.|.++||....+ + ...++..+++.. +++.+.. +-...|...+..+
T Consensus 88 ~~v~i~~~g~e~l~~a~~~gkgvIllt~H~GnwE~~~~~l~~~~~~~~~vyr~~--~n~~~~~~~~~~R~~~g~~~i~~~ 165 (298)
T PRK07920 88 ARVRVSIEGLEHLDAALAAGRGVVLALPHSGNWDMAGAWLVQHHGPFTTVAERL--KPESLYERFVAYRESLGFEVLPLT 165 (298)
T ss_pred hhhhhccCCHHHHHHHHhcCCCeEEEecCCCHHHHHHHHHHHcCCCeEEEEecc--CCHHHHHHHHHHHHhcCCEEEecC
Confidence 35777 89888754 468999999999999987543 3 345666676653 3443333 3345666666432
Q ss_pred CchhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcc-------cccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCC
Q 028090 104 DSRSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLG-------AFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGM 176 (214)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~-------~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~ 176 (214)
+ +..+.++.+.++|++|+.+.+.||++.+.++... .+.+|++.+|+++++||+|+++...
T Consensus 166 ~--~~~~~~r~ii~~Lk~g~~v~il~Dq~~~~~g~~v~FFG~~a~t~~g~a~LA~~~~apVvp~~~~r~----------- 232 (298)
T PRK07920 166 G--GERPPFEVLAERLRAGGVVCLLADRDLTRSGVEVDFFGERTRMPAGPAALALETGAALLPVHLWFE----------- 232 (298)
T ss_pred C--CCchHHHHHHHHHHcCCeEEEEeccCccCCCCEEeeCCCCCCCCCCHHHHHHHHCCcEEEEEEEEe-----------
Confidence 2 1234678999999999999999999876554433 4589999999999999999999532
Q ss_pred ccceeEEEEEcCCCCC---CChHHHHHHHHHHHHHHhccCC
Q 028090 177 LNEGTIKVVIHKPIQG---HDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 177 ~~~~~~~v~~g~pi~~---~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
..+ +++.+.+|++. +|..+.++++.+.+++.+++++
T Consensus 233 -~~~-y~v~~~~~~~~~~~~~~~~~t~~~~~~lE~~Ir~~P 271 (298)
T PRK07920 233 -GDG-WGFRVHPPLDVPSAEDVAAMTQALADAFAANIAAHP 271 (298)
T ss_pred -CCe-EEEEEeCCCCCCchhHHHHHHHHHHHHHHHHHHhCh
Confidence 123 88999999873 4566888999999998887653
No 42
>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=99.50 E-value=1.3e-12 Score=104.70 Aligned_cols=163 Identities=12% Similarity=0.178 Sum_probs=120.8
Q ss_pred CceeEEEEeeecCCC-CCCCEEEEeCCCCCchHHHHH-h--cCCceeeeecccccccchHHHHHH----hcCcEEeecCC
Q 028090 33 PFLKLEIEGLENLPS-SDTPAVYVSNHQSFLDIYTLL-T--LGKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRMD 104 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~-~~~~~i~~~nH~s~~D~~~l~-~--~~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~~ 104 (214)
+..+++++|.+++.. .++|+|+++-|.++||.+..+ + ...++..+++. .++|.++.++. ..|...+.+.
T Consensus 91 l~~~~~~~g~~~~~~~~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~~~vyr~--~~n~~~d~~~~~~R~~~g~~~i~~~- 167 (293)
T PRK06946 91 LEKLVQVDSAIDLTDPDGPPTIFLGLHFVGIEAGSIWLNYSLRRRVGSLYTP--MSNPLLDAIAKAARGRFGAEMVSRA- 167 (293)
T ss_pred HcceEEEECHHHHHhcCCCCEEEEecchhHHHHHHHHHHhcccCCceEEeeC--CCCHHHHHHHHHHHHhcCCCccCCC-
Confidence 345688889877654 478999999999999987643 2 23455666666 47888888765 4454555322
Q ss_pred chhHHHHHHHHHHHHhCCCeEEEEeCCeecC-CCCcccc-------cccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCC
Q 028090 105 SRSQLECLKRCMELIKKGASVCFFPEGTRSK-DGKLGAF-------KKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGM 176 (214)
Q Consensus 105 ~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~-~~~~~~~-------~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~ 176 (214)
+.++.+.++|++|+.+++.+|+..+. ++...+| .+|++++|+++++||+|+++.-.
T Consensus 168 -----~~~r~~~~~Lk~g~~v~~l~Dq~~~~~~gv~v~FFG~~a~t~~~~a~LA~~~~a~vvp~~~~r~----------- 231 (293)
T PRK06946 168 -----DSARQVLRWLRDGKPVMLGADMDFGLRDSTFVPFFGVPACTLTAVSRLARTGGAQVVPFITEVL----------- 231 (293)
T ss_pred -----chHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCCcHHhHHHHHHHHhcCCeEEEEEEEEe-----------
Confidence 25789999999999999999998653 4444455 78999999999999999999421
Q ss_pred ccceeEEEEEcCCCC---CCChHHHHHHHHHHHHHHhccCC
Q 028090 177 LNEGTIKVVIHKPIQ---GHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 177 ~~~~~~~v~~g~pi~---~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
.....+++.+.+|++ .+|.++.++++.+.+|+.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~n~~lE~~Ir~~P 272 (293)
T PRK06946 232 PDYKGYRLRVFKPWENYPTGDDDLDARRMNAFLEEQIRLMP 272 (293)
T ss_pred CCCCeEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHcCc
Confidence 112247888888876 35777889999999999988764
No 43
>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=99.50 E-value=2.3e-12 Score=103.12 Aligned_cols=162 Identities=17% Similarity=0.196 Sum_probs=117.0
Q ss_pred CceeEEEEeeecCCC-CCCCEEEEeCCCCCchHHHH-Hhc-CCceeeeecccccccchHHHHHH----hcCcEEeecCCc
Q 028090 33 PFLKLEIEGLENLPS-SDTPAVYVSNHQSFLDIYTL-LTL-GKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRMDS 105 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~-~~~~~i~~~nH~s~~D~~~l-~~~-~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~~~ 105 (214)
+..+++++|.|.+.+ .++|+|+++.|.++||.... .+. ..++..+++.. ++|.++.++. ..|...+..+.
T Consensus 96 ~~~~v~~~g~e~l~~~~gkgvIl~t~H~GnwE~~~~~l~~~~~~~~~vyr~~--~n~~~d~~~~~~R~~~g~~~i~~~~- 172 (290)
T PRK06628 96 LERRIEIIGIENIKKLEGQPFLLFSGHFANWDISLKILHKFYPKVAVIYRKA--NNPYVNKLVNESRAGDKLRLIPKGP- 172 (290)
T ss_pred ccCeEEEeCHHHHHHhcCCcEEEEEecchHHHHHHHHHHHhCCCeeEEEecC--CCHHHHHHHHHHHHhcCCceecCCC-
Confidence 445788899877643 36799999999999998754 332 33566666664 7788877664 45555553211
Q ss_pred hhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCccc-------ccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCcc
Q 028090 106 RSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLGA-------FKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGMLN 178 (214)
Q Consensus 106 ~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~-------~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~~ 178 (214)
..++++.+++++|+.+++.||+..+ ++...+ ..+|++++|+++++||+|+++... .
T Consensus 173 ----~~~r~l~k~Lk~g~~v~il~Dq~~~-~gv~v~FFG~~a~t~~~~a~LA~~~~apvv~~~~~r~------------~ 235 (290)
T PRK06628 173 ----EGSRALVRAIKESESIVMLVDQKMN-DGIEVPFLGHPAMTASAIAKIALQYKYPIIPCQIIRT------------K 235 (290)
T ss_pred ----chHHHHHHHHHcCCeEEEEecccCC-CCeeeecCCCccccchHHHHHHHHHCCCEEEEEEEEC------------C
Confidence 1478899999999999999998853 333334 378999999999999999999421 1
Q ss_pred ceeEEEEEcCCCCC-------CChHHHHHHHHHHHHHHhccCC
Q 028090 179 EGTIKVVIHKPIQG-------HDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 179 ~~~~~v~~g~pi~~-------~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
.+.+++.+.+|++. +|..+.++++.+.+|+.+++++
T Consensus 236 ~~~~~i~~~~~~~~~~~~~~~~~~~~~t~~~n~~lE~~Ir~~P 278 (290)
T PRK06628 236 GSYFKVIVHPQLKFEQTGDNKADCYNIMLNINQMLGEWVKQNP 278 (290)
T ss_pred CCeEEEEEcCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHcCc
Confidence 24688889888763 2344667888889998887754
No 44
>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=99.50 E-value=7.2e-13 Score=106.87 Aligned_cols=162 Identities=10% Similarity=0.097 Sum_probs=118.6
Q ss_pred CceeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHHH-h-cCCceeeeecccccccchHHHHHH----hcCcEEeecC
Q 028090 33 PFLKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTLL-T-LGKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRM 103 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l~-~-~~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~ 103 (214)
+..+++++|.|.+.+ .++|+|+++.|.++||....+ + ...++..++++. ++|.++.++. ..|...+..+
T Consensus 113 ~~~~~~~~g~e~l~~a~a~gkgvIllt~H~GnWE~~~~~l~~~~~~~~~vyr~~--~n~~~d~~i~~~R~~~g~~~i~~~ 190 (308)
T PRK06553 113 EPGRVEVRGIEIFERLRDDGKPALIFTAHLGNWELLAIAAAAFGLDVTVLFRPP--NNPYAARKVLEARRTTMGGLVPSG 190 (308)
T ss_pred CCCeeEecCHHHHHHHHhcCCCEEEEeeCchHHHHHHHHHHHcCCceEEEEecC--CChHHHHHHHHHHHHcCCCcccCC
Confidence 345688889887653 478999999999999987653 3 234666676664 7787777665 3344444221
Q ss_pred CchhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCccc-------ccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCC
Q 028090 104 DSRSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLGA-------FKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGM 176 (214)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~-------~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~ 176 (214)
...++++.+++++|+.+++.+|+..+ ++...+ ..+|++++|.++++||+|+++..
T Consensus 191 -----~~~~r~l~r~Lk~g~~v~il~DQ~~~-~gv~v~FFG~~a~t~~~~a~LA~~~~apVvp~~~~R------------ 252 (308)
T PRK06553 191 -----AGAAFALAGVLERGGHVGMLVDQKFT-RGVEVTFFGRPVKTNPLLAKLARQYDCPVHGARCIR------------ 252 (308)
T ss_pred -----ChHHHHHHHHHHcCCeEEEEecccCC-CCceeccCCCcCCCCchHHHHHHHHCCCEEEEEEEE------------
Confidence 12578999999999999999998864 333334 37899999999999999999942
Q ss_pred ccceeEEEEEcCCCCC-------CChHHHHHHHHHHHHHHhccCC
Q 028090 177 LNEGTIKVVIHKPIQG-------HDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 177 ~~~~~~~v~~g~pi~~-------~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
...+++++.+.+|++. +|.++.++++.+.+|+.+++++
T Consensus 253 ~~~g~y~i~~~~~~~~~~~~~~~~d~~~~t~~~n~~lE~~Ir~~P 297 (308)
T PRK06553 253 LPGGRFRLELTERVELPRDADGQIDVQATMQALTDVVEGWVREYP 297 (308)
T ss_pred cCCCeEEEEEecCCCCCCCCCccccHHHHHHHHHHHHHHHHHcCh
Confidence 1234699999988863 2466778999999999888764
No 45
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria. Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane
Probab=99.46 E-value=3.3e-12 Score=102.57 Aligned_cols=163 Identities=19% Similarity=0.300 Sum_probs=121.6
Q ss_pred CceeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHHH--hcCCceeeeecccccccchHHHHH----HhcCcEEeecC
Q 028090 33 PFLKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTLL--TLGKSFKFISKTGIFLFPVIGWAM----SMMGVIPLKRM 103 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l~--~~~~~~~~~~~~~~~~~p~~~~~~----~~~g~~~v~r~ 103 (214)
+..+++++|.|++.+ .++|+|+++.|.++||....+ ....++..++... +++.++.++ ...|...+.++
T Consensus 101 ~~~~~~~~g~e~l~~a~~~g~gvIl~t~H~GnwE~~~~~l~~~~~~~~~i~~~~--~n~~~~~~~~~~R~~~g~~~i~~~ 178 (295)
T PF03279_consen 101 LKKRVEIEGEEHLEAALAEGRGVILLTGHFGNWELAGRALARRGPPVAVIYRPQ--KNPYIDRLLNKLRERFGIELIPKG 178 (295)
T ss_pred cceEEEEECHHHHHHHHhcCCCCEEeCcCcChHHHHHHHHHhhCCceEEEecCC--ccHhHHHHHHHHHHhcCCeEecch
Confidence 446788999888763 478999999999999976542 3445555555553 456555554 46676666643
Q ss_pred CchhHHHHHHHHHHHHhCCCeEEEEeCCeecCC-CCc-------ccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCC
Q 028090 104 DSRSQLECLKRCMELIKKGASVCFFPEGTRSKD-GKL-------GAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEG 175 (214)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~-~~~-------~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~ 175 (214)
+ .+.++.+++++|+.+++.+|+..+.. +.. ..+..|++.+|.++++||+|+++....
T Consensus 179 ~------~~~~~~~~Lk~g~~v~~l~Dq~~~~~~~~~v~FfG~~a~~~~g~a~lA~~~~apvvp~~~~r~~--------- 243 (295)
T PF03279_consen 179 E------GIRELIRALKEGGIVGLLGDQDPGKKDGVFVPFFGRPASTPTGPARLARKTGAPVVPVFAYREP--------- 243 (295)
T ss_pred h------hHHHHHHHhccCCEEEEEECCCCCCCCceEEeECCeecccccHHHHHHHHhCCcEEEEEEEEeC---------
Confidence 2 27889999999999999999876554 333 344899999999999999999995321
Q ss_pred CccceeEEEEEcCCCCC---CChHHHHHHHHHHHHHHhccCC
Q 028090 176 MLNEGTIKVVIHKPIQG---HDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 176 ~~~~~~~~v~~g~pi~~---~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
....+++.+.+|++. ++.++.++++.+.+++.+++++
T Consensus 244 --~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~lE~~Ir~~P 283 (295)
T PF03279_consen 244 --DGSHYRIEIEPPLDFPSSEDIEELTQRYNDRLEEWIREHP 283 (295)
T ss_pred --CCCEEEEEEeecccCCccchHHHHHHHHHHHHHHHHHcCh
Confidence 113688999998874 3678999999999999988764
No 46
>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase. This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars.
Probab=99.44 E-value=6e-12 Score=101.42 Aligned_cols=163 Identities=15% Similarity=0.218 Sum_probs=120.3
Q ss_pred CceeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHHH-h-cCCceeeeecccccccchHHHHHH----hcCcEEeecC
Q 028090 33 PFLKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTLL-T-LGKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRM 103 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l~-~-~~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~ 103 (214)
...+++++|.|.+.+ .++|+|+++-|.++||....+ + ...++..+++.. ++|.++.++. ..|...+...
T Consensus 102 ~~~~~~i~g~e~l~~~~~~gkgvi~~t~H~gnwE~~~~~~~~~~~~~~~v~r~~--~n~~~d~~~~~~R~~~g~~~i~~~ 179 (305)
T TIGR02208 102 LRRRVNLMGLEHIEAAQAAGKPVIFLVPHGWAIDYAGLRLASQGLPMVTMFNNH--KNPLFDWLWNRVRSRFGGHVYARE 179 (305)
T ss_pred HhCceEEeCHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHhcCCCceEEeeCC--CCHHHHHHHHHHHhcCCCceecCh
Confidence 335688899887643 478999999999999976543 3 335666666664 6787887665 3444444321
Q ss_pred CchhHHHHHHHHHHHHhCCCeEEEEeCCeecC-CCCcccc-------cccHHHHHHhCCCcEEEEEEeCCCccCcCCCCC
Q 028090 104 DSRSQLECLKRCMELIKKGASVCFFPEGTRSK-DGKLGAF-------KKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEG 175 (214)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~-~~~~~~~-------~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~ 175 (214)
..++.+.++|++|+.+++.+|...+. ++...+| .+|++.+|.++++||+|+++.-
T Consensus 180 ------~~~r~i~~aLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~a~LA~~~~apvv~~~~~r----------- 242 (305)
T TIGR02208 180 ------AGIKALLASLKRGESGYYLPDEDHGPEQSVFVPFFATYKATLPVVGRLAKAGNAQVVPVFPGY----------- 242 (305)
T ss_pred ------hhHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeccCCCcchhHHHHHHHHHhcCCeEEEEEEEE-----------
Confidence 35799999999999999999998753 4445555 6789999999999999999841
Q ss_pred CccceeEEEEEcCCCC---CCChHHHHHHHHHHHHHHhccCC
Q 028090 176 MLNEGTIKVVIHKPIQ---GHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 176 ~~~~~~~~v~~g~pi~---~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
....+.+++.+.+|++ .+|.++.++++.+.+|+.+++++
T Consensus 243 ~~~~~~~~i~~~~~~~~~~~~~~~~~t~~~n~~lE~~Ir~~P 284 (305)
T TIGR02208 243 NQVTGKFELTVRPAMATELSVDPEQEARAMNKEVEQFILPYP 284 (305)
T ss_pred ECCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHcCc
Confidence 1112358888888875 35788899999999999988764
No 47
>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=99.44 E-value=7.2e-12 Score=100.90 Aligned_cols=161 Identities=12% Similarity=0.087 Sum_probs=118.7
Q ss_pred eEEEEeeecCCC---CCCCEEEEeCCCCCchHHHH-HhcCCceeeeecccccccchHHHHHH----hcCcEEeecCCchh
Q 028090 36 KLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTL-LTLGKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRMDSRS 107 (214)
Q Consensus 36 ~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l-~~~~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~~~~~ 107 (214)
.++++|.|.+.+ .++|+|+++-|.++||.... .+...++..+++. .++|.++.++. ..|...+...
T Consensus 96 ~~~~~g~e~l~~~~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~--~~n~~~d~~~~~~R~~~g~~~i~~~---- 169 (305)
T PRK08734 96 LRQRHGQELYDAALASGRGVIVAAPHFGNWELLNQWLSERGPIAIVYRP--PESEAVDGFLQLVRGGDNVRQVRAE---- 169 (305)
T ss_pred eEEecCHHHHHHHHHcCCCEEEEccccchHHHHHHHHHccCCceEEEeC--CCCHHHHHHHHHHhccCCCeeecCC----
Confidence 467889887653 47899999999999998765 3333456666665 47888888766 4455555221
Q ss_pred HHHHHHHHHHHHhCCCeEEEEeCCeecC-CCCcccc-------cccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCccc
Q 028090 108 QLECLKRCMELIKKGASVCFFPEGTRSK-DGKLGAF-------KKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGMLNE 179 (214)
Q Consensus 108 ~~~~~~~~~~~l~~g~~~~ifPeG~~~~-~~~~~~~-------~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~~~ 179 (214)
...++++.++|++|+.+++.+|...+. ++...+| .+|++.+|+++++||+|+++.-. ...
T Consensus 170 -~~~~r~li~~Lk~g~~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apVvp~~~~R~-----------~~~ 237 (305)
T PRK08734 170 -GPAVRQLFKVLKDGGAVGILPDQQPKMGDGVFAPFFGIPALTMTLVNRLAERTGATVLYGWCERI-----------GPD 237 (305)
T ss_pred -chhHHHHHHHHhcCCeEEEeCCCCCCCCCCeEeccCCCccchhhHHHHHHHHhCCeEEEEEEEEc-----------CCC
Confidence 135789999999999999999988653 3444444 79999999999999999999421 112
Q ss_pred eeEEEEEcCCCC---CCChHHHHHHHHHHHHHHhccCC
Q 028090 180 GTIKVVIHKPIQ---GHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 180 ~~~~v~~g~pi~---~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
.++++.+.+|++ .+|..+.++++.+.+++.+++++
T Consensus 238 ~~y~~~~~~~~~~~~~~~~~~~~~~~n~~lE~~Ir~~P 275 (305)
T PRK08734 238 LEFALHVQPADPAVADPDPLRAATALNAGIERIARRDP 275 (305)
T ss_pred CcEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHcCc
Confidence 358888887765 34677888999999999988764
No 48
>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated
Probab=99.44 E-value=7e-12 Score=101.41 Aligned_cols=163 Identities=17% Similarity=0.268 Sum_probs=120.5
Q ss_pred CceeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHHH-hc-CCceeeeecccccccchHHHHHH----hcCcEEeecC
Q 028090 33 PFLKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTLL-TL-GKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRM 103 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l~-~~-~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~ 103 (214)
+..+++++|.|.+.+ .++|+|+++-|.++||....+ +. ..++..+++.. ++|.++.++. ..|.-.+.+
T Consensus 111 ~~~~~~~~g~e~l~~a~~~gkgvI~~t~H~gnwE~~~~~~~~~~~~~~~vyr~~--~n~~~d~~~~~~R~~~g~~~i~~- 187 (314)
T PRK08943 111 LQRRVEWHGLEILEEARANGENVIFLVPHGWAIDIPAMLLASQGQPMAAMFHNQ--RNPLFDWLWNRVRRRFGGRLHAR- 187 (314)
T ss_pred HhCeEEEECHHHHHHHHhCCCCEEEEEechhHHHHHHHHHHhcCCCccEEEeCC--CCHHHHHHHHHHHhhcCCeeecC-
Confidence 345788899887643 478999999999999976543 32 35666666664 6777777764 345444432
Q ss_pred CchhHHHHHHHHHHHHhCCCeEEEEeCCeecC-CCCcccc-------cccHHHHHHhCCCcEEEEEEeCCCccCcCCCCC
Q 028090 104 DSRSQLECLKRCMELIKKGASVCFFPEGTRSK-DGKLGAF-------KKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEG 175 (214)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~-~~~~~~~-------~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~ 175 (214)
...++.+.++|++|+.+++.+|+..+. ++...+| .+|++.+|+++++||+|+++.-
T Consensus 188 -----~~~~r~i~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~k~~apvvp~~~~R----------- 251 (314)
T PRK08943 188 -----EDGIKPFISSVRQGYWGYYLPDEDHGPEHSVFVDFFATYKATLPGIGRLAKVCRARVVPLFPVY----------- 251 (314)
T ss_pred -----chhHHHHHHHHhCCCeEEEeCCCCCCCCCCEEeCCCCCchhHhHHHHHHHHHhCCeEEEEEEEE-----------
Confidence 125788999999999999999998754 3444444 6799999999999999999941
Q ss_pred CccceeEEEEEcCCCC---CCChHHHHHHHHHHHHHHhccCC
Q 028090 176 MLNEGTIKVVIHKPIQ---GHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 176 ~~~~~~~~v~~g~pi~---~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
....+++++.+.+|++ .+|..+.++++.+.+++.+++++
T Consensus 252 ~~~~~~~~i~~~~~~~~~~~~d~~~~t~~~~~~lE~~Ir~~P 293 (314)
T PRK08943 252 NGKTHRLDIEIRPPMDDLLSADDETIARRMNEEVEQFVGPHP 293 (314)
T ss_pred eCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHcCc
Confidence 1123468899988875 25778889999999999988764
No 49
>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=99.43 E-value=8e-12 Score=100.94 Aligned_cols=164 Identities=16% Similarity=0.219 Sum_probs=117.4
Q ss_pred CceeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHH-HhcCCceeeeecccccccchHHHHHHh----cCcEEeecCC
Q 028090 33 PFLKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTL-LTLGKSFKFISKTGIFLFPVIGWAMSM----MGVIPLKRMD 104 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l-~~~~~~~~~~~~~~~~~~p~~~~~~~~----~g~~~v~r~~ 104 (214)
+..+++++|.|.+.+ .++|+|+++-|.++||.... .+...++..+++. .++|.++.++.. .|.-.+..
T Consensus 103 ~~~~~~~~g~e~l~~a~~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~--~~n~~~d~~~~~~R~~~g~~~i~~-- 178 (310)
T PRK05646 103 LARLAHIEGLEHLQQAQQEGQGVILMALHFTTLEIGAALLGQQHTIDGMYRE--HKNPVFDFIQRRGRERHNLDSTAI-- 178 (310)
T ss_pred HhCeEEEeCHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeC--CCCHHHHHHHHHHhhccCCCcccc--
Confidence 334788899887643 47899999999999998754 3333444555555 477888887753 33222211
Q ss_pred chhHHHHHHHHHHHHhCCCeEEEEeCCeecC-CCCcccc-------cccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCC
Q 028090 105 SRSQLECLKRCMELIKKGASVCFFPEGTRSK-DGKLGAF-------KKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGM 176 (214)
Q Consensus 105 ~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~-~~~~~~~-------~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~ 176 (214)
..++++++.++|++|+.+++.+|...+. ++...+| .+|++.+|+++++||+|+++...
T Consensus 179 ---~~~~~r~ilk~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r~----------- 244 (310)
T PRK05646 179 ---EREDVRGMLKLLRAGRAIWYAPDQDYGAKQSIFVPLFGIPAATVTATTKFARLGRARVIPFTQKRL----------- 244 (310)
T ss_pred ---cHhhHHHHHHHHhCCCeEEEeCCCCCCCCCCEEecCCCCcchhhhHHHHHHHhhCCcEEEEEEEEe-----------
Confidence 1125788999999999999999987654 3444444 79999999999999999999421
Q ss_pred ccceeEEEEEcCCCC---CCChHHHHHHHHHHHHHHhccCC
Q 028090 177 LNEGTIKVVIHKPIQ---GHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 177 ~~~~~~~v~~g~pi~---~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
.....+++.+.+|++ .++.++.++++.+.+|+.+++++
T Consensus 245 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~lE~~Ir~~P 285 (310)
T PRK05646 245 ADGSGYRLVIHPPLEDFPGESEEADCLRINQWVERVVRECP 285 (310)
T ss_pred CCCCeEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHcCc
Confidence 112258999988886 34677778999999999988764
No 50
>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=99.42 E-value=9.7e-12 Score=100.23 Aligned_cols=160 Identities=21% Similarity=0.257 Sum_probs=117.7
Q ss_pred CceeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHH-HhcCCceeeeecccccccchHHHHHHh----cCcEEeecCC
Q 028090 33 PFLKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTL-LTLGKSFKFISKTGIFLFPVIGWAMSM----MGVIPLKRMD 104 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l-~~~~~~~~~~~~~~~~~~p~~~~~~~~----~g~~~v~r~~ 104 (214)
+..+++++|.|.+.+ +++|+|+++-|.++||.... .+...++..++++ .++|.++.++.. .|...+.+
T Consensus 106 ~~~~v~v~g~e~l~~a~~~gkgvI~~t~H~GnWE~~~~~~~~~~~~~~vyr~--~~n~~~d~~i~~~R~~~g~~~i~~-- 181 (306)
T PRK08733 106 IRPGVQIEGLEHLQQLQQQGRGVLLVSGHFMTLEMCGRLLCDHVPLAGMYRR--HRNPVFEWAVKRGRLRYATHMFAN-- 181 (306)
T ss_pred HhCcEEEeCHHHHHHHHhCCCCEEEEecCchHHHHHHHHHHccCCceEEEeC--CCCHHHHHHHHHHHhhcCCcCcCc--
Confidence 345688999877643 47899999999999998754 2333455555555 367777776653 44444421
Q ss_pred chhHHHHHHHHHHHHhCCCeEEEEeCCeecC-CCCcccc-------cccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCC
Q 028090 105 SRSQLECLKRCMELIKKGASVCFFPEGTRSK-DGKLGAF-------KKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGM 176 (214)
Q Consensus 105 ~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~-~~~~~~~-------~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~ 176 (214)
+.++.+.+++++|+.+++.+|...+. ++...+| .+|++.+|.++++||+|+++.-
T Consensus 182 -----~~~r~~~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r------------ 244 (306)
T PRK08733 182 -----EDLRATIKHLKRGGFLWYAPDQDMRGKDTVFVPFFGHPASTITATHQLARLTGCAVVPYFHRR------------ 244 (306)
T ss_pred -----ccHHHHHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCchhHHHHHHHHHHHhCCeEEEEEEEE------------
Confidence 13688899999999999999988653 3444444 7899999999999999999931
Q ss_pred ccceeEEEEEcCCCC---CCChHHHHHHHHHHHHHHhccCC
Q 028090 177 LNEGTIKVVIHKPIQ---GHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 177 ~~~~~~~v~~g~pi~---~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
. .+++++.+.+|+. .+|.++.++++.+.+|+.+++++
T Consensus 245 ~-~~~y~i~i~~~~~~~~~~~i~~~t~~~~~~lE~~Ir~~P 284 (306)
T PRK08733 245 E-GGRYVLKIAPPLADFPSDDVIADTTRVNAAIEDMVREAP 284 (306)
T ss_pred e-CCeEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHcCc
Confidence 1 2468888888875 35777889999999999988764
No 51
>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=99.42 E-value=8.2e-12 Score=100.81 Aligned_cols=161 Identities=17% Similarity=0.219 Sum_probs=117.7
Q ss_pred CceeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHHH-hcCCceeeeecccccccchHHHHHH----hcCcEEeecCC
Q 028090 33 PFLKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTLL-TLGKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRMD 104 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l~-~~~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~~ 104 (214)
+..+++++|.|.+.+ .++|+|+++-|.++||.+..+ +...+...+++. .++|.++.++. ..|...+.+ +
T Consensus 106 ~~~~v~i~g~e~l~~a~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~--~~n~~~d~~~~~~R~~~g~~~i~~-~ 182 (309)
T PRK06860 106 IKRWTEVEGLEHIREVQAQGRGVLLVGVHFLTLELGARIFGMHNPGIGVYRP--NDNPLYDWLQTWGRLRSNKSMLDR-K 182 (309)
T ss_pred HcCeEEEeCHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHccCCCeEEeeC--CCCHHHHHHHHHHHhhcCCcCcCc-c
Confidence 445788999887643 478999999999999987543 333355556555 47787777665 345444422 1
Q ss_pred chhHHHHHHHHHHHHhCCCeEEEEeCCeecC-CCCc--------ccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCC
Q 028090 105 SRSQLECLKRCMELIKKGASVCFFPEGTRSK-DGKL--------GAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEG 175 (214)
Q Consensus 105 ~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~-~~~~--------~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~ 175 (214)
.++++.+++++|+.+++.+|+..+. ++.. ....+|++.+|+++++||+|+++..
T Consensus 183 ------~~r~~~k~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~~a~t~~g~a~LA~~~~apvvp~~~~R----------- 245 (309)
T PRK06860 183 ------DLKGMIKALKKGERIWYAPDHDYGPRSSVFVPFFAVEQAATTTGTWMLARMSKAAVIPFVPRR----------- 245 (309)
T ss_pred ------cHHHHHHHHhcCCeEEEeCCCCCCCCCCEEecCCCCCchhhHHHHHHHHHHhCCeEEEEEEEE-----------
Confidence 2688899999999999999987643 2322 3347889999999999999999942
Q ss_pred Cccce-eEEEEEcCCCC---CCChHHHHHHHHHHHHHHhccCC
Q 028090 176 MLNEG-TIKVVIHKPIQ---GHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 176 ~~~~~-~~~v~~g~pi~---~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
...+ ++++.+.+|++ .+|.++.++++++.+|+.+++++
T Consensus 246 -~~~~~~~~i~~~~~~~~~~~~d~~~~t~~~n~~lE~~Ir~~P 287 (309)
T PRK06860 246 -KPDGKGYELIILPPEDSPPLDDAEATAAWMNKVVEKCILMAP 287 (309)
T ss_pred -eCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHcCc
Confidence 1223 58999988876 24777899999999999988764
No 52
>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed
Probab=99.41 E-value=1.3e-11 Score=99.45 Aligned_cols=162 Identities=15% Similarity=0.247 Sum_probs=115.9
Q ss_pred CceeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHH-HhcCCceeeeecccccccchHHHHHH----hcCcEEeecCC
Q 028090 33 PFLKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTL-LTLGKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRMD 104 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l-~~~~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~~ 104 (214)
+..+++++|.|.+.+ .++|+|+++-|.++||.... ++...+...++++. ++|+++.++. ..|...+.+
T Consensus 104 ~~~~v~~~g~e~l~~a~~~gkgvI~lt~H~GnwE~~~~~l~~~~~~~~vyr~~--~n~~~d~~~~~~R~~~g~~~i~~-- 179 (305)
T PRK08025 104 VRKWFDVEGLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPH--NNKLMEWVQTRGRMRSNKAMIGR-- 179 (305)
T ss_pred HhCeEEEECHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHccCCCeEEEeCC--CCHHHHHHHHHHHhccCCcCcCc--
Confidence 445788999887653 47899999999999998764 34334555566653 6788888764 334444421
Q ss_pred chhHHHHHHHHHHHHhCCCeEEEEeCCeecC-CCCccc--------ccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCC
Q 028090 105 SRSQLECLKRCMELIKKGASVCFFPEGTRSK-DGKLGA--------FKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEG 175 (214)
Q Consensus 105 ~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~-~~~~~~--------~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~ 175 (214)
+.++.+.++|++|+.+++.||+..+. ++...+ ..+|++.+|+++++||+|+++...
T Consensus 180 -----~~~r~~~~aLk~g~~v~il~DQ~~~~~~gv~v~FfG~~~a~t~~g~~~LA~~~~apvvp~~~~R~---------- 244 (305)
T PRK08025 180 -----NNLRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMVRK---------- 244 (305)
T ss_pred -----ccHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCcchhHHHHHHHHHHhhCCeEEEEEEEEe----------
Confidence 12677999999999999999988653 233323 367889999999999999999421
Q ss_pred CccceeEEEEEcCCCC--CCChHHHHHHHHHHHHHHhccCC
Q 028090 176 MLNEGTIKVVIHKPIQ--GHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 176 ~~~~~~~~v~~g~pi~--~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
.....+++.+.+|++ ++|..+.++.+.+.+|+.+++++
T Consensus 245 -~~~~~~~i~~~~~~~~~~~~~~~~~~~~n~~lE~~Ir~~P 284 (305)
T PRK08025 245 -ADYSGYRLFITPEMEGYPTDENQAAAYMNKIIEKEIMRAP 284 (305)
T ss_pred -CCCCeEEEEEeCCccCCCCCHHHHHHHHHHHHHHHHHcCc
Confidence 112247888888775 35666778888899999888764
No 53
>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=99.40 E-value=1.5e-11 Score=98.48 Aligned_cols=160 Identities=13% Similarity=0.129 Sum_probs=115.3
Q ss_pred eeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHH-HhcCCceeeeecccccccchHHHHHHh----cCcEEe-ecCCc
Q 028090 35 LKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTL-LTLGKSFKFISKTGIFLFPVIGWAMSM----MGVIPL-KRMDS 105 (214)
Q Consensus 35 ~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l-~~~~~~~~~~~~~~~~~~p~~~~~~~~----~g~~~v-~r~~~ 105 (214)
.+++++|.|.+.+ .++|+|+++-|.++||.+.. ++...+...++.. .++|.+..++.. .|...+ .+
T Consensus 88 ~~~~~~~~e~l~~~~~~gkgvI~~t~H~GnWEl~~~~~~~~~~~~~i~r~--~~n~~~d~~~~~~R~~~g~~~i~~~--- 162 (289)
T PRK08706 88 SLVRYRNKHYLDDALAAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSH--QKNKILDEQILKGRNRYHNVFLIGR--- 162 (289)
T ss_pred CceEEECHHHHHHHHhCCCCEEEEecchhHHHHHHHHHHccCCCcEEeeC--CCCHHHHHHHHHHHhccCCcccccC---
Confidence 4588899887643 47899999999999998764 3333455555555 377777776653 333222 22
Q ss_pred hhHHHHHHHHHHHH-hCCCeEEEEeCCeecC-CCCccc-------ccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCC
Q 028090 106 RSQLECLKRCMELI-KKGASVCFFPEGTRSK-DGKLGA-------FKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGM 176 (214)
Q Consensus 106 ~~~~~~~~~~~~~l-~~g~~~~ifPeG~~~~-~~~~~~-------~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~ 176 (214)
.+.++++.++| ++|..+++.+|...+. ++...+ +.+|++.+|.++++||+|+++.-
T Consensus 163 ---~~~~r~i~k~L~k~~~~v~~l~Dq~~~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~R------------ 227 (289)
T PRK08706 163 ---TEGLRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANAKVIPAIPVR------------ 227 (289)
T ss_pred ---hhhHHHHHHHHHhCCceEEEeCCCCCCCCCCEEeccCCccchhhhHHHHHHHhcCCeEEEEEEEE------------
Confidence 12578899999 5777788889888653 343444 48999999999999999999942
Q ss_pred ccceeEEEEEcCCCC---CCChHHHHHHHHHHHHHHhccCC
Q 028090 177 LNEGTIKVVIHKPIQ---GHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 177 ~~~~~~~v~~g~pi~---~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
...+.+++.+.+|++ .+|..+.++++.+.+|+.+++++
T Consensus 228 ~~~~~~~i~i~~~~~~~~~~~~~~~t~~~~~~lE~~Ir~~P 268 (289)
T PRK08706 228 EADNTVTLHFYPAWDSFPSEDAQADAQRMNRFIEERVREHP 268 (289)
T ss_pred cCCCcEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHcCc
Confidence 112468888887765 35778899999999999988764
No 54
>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase. This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis.
Probab=99.39 E-value=1.8e-11 Score=98.62 Aligned_cols=162 Identities=17% Similarity=0.212 Sum_probs=116.6
Q ss_pred CceeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHH-HhcCCceeeeecccccccchHHHHHH----hcCcEEeecCC
Q 028090 33 PFLKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTL-LTLGKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRMD 104 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l-~~~~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~~ 104 (214)
+..+++++|.|.+.+ +++|+|+++-|.++||.+.. .+...+...++++ .++|.++.++. ..|...+.+.
T Consensus 100 l~~~v~i~g~e~l~~a~~~gkgvI~lt~H~GnwE~~~~~~~~~~~~~~vyr~--~~n~~~d~l~~~~R~~~g~~~i~~~- 176 (303)
T TIGR02207 100 IKKWMQIEGLEHLQRAQKQGRGVLLVGVHFLTLELGARIFGQQQPGIGVYRP--HNNPLFDWIQTRGRLRSNKAMIDRK- 176 (303)
T ss_pred HhCcEEEECHHHHHHHHhcCCCEEEEecchhHHHHHHHHHHccCCCeEEEeC--CCCHHHHHHHHHHHHhcCCcccCcc-
Confidence 335688899887643 47899999999999998754 3333455555554 36777777664 3444444221
Q ss_pred chhHHHHHHHHHHHHhCCCeEEEEeCCeecC-CCC-------c-ccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCC
Q 028090 105 SRSQLECLKRCMELIKKGASVCFFPEGTRSK-DGK-------L-GAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEG 175 (214)
Q Consensus 105 ~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~-~~~-------~-~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~ 175 (214)
.++.+.++|++|+.++|.+|+..+. ++. . ..+..|++.+|.++++||+|+++...
T Consensus 177 ------~~r~i~~~Lk~g~~v~il~Dq~~~~~~g~~v~FfG~~~a~~~~g~a~LA~~~~apvip~~~~r~---------- 240 (303)
T TIGR02207 177 ------DLRGMIKALKNGERIWYAPDHDYGRKSSVFVPFFAVPDAATTTGTSILARLSKCAVVPFTPRRN---------- 240 (303)
T ss_pred ------cHHHHHHHHhCCCeEEEeCCCCCCCCCcEEeCCCCCCcchhHHHHHHHHHHhCCeEEEEEEEEe----------
Confidence 2678999999999999999977543 232 2 34567999999999999999999421
Q ss_pred CccceeEEEEEcCCCC---CCChHHHHHHHHHHHHHHhccCC
Q 028090 176 MLNEGTIKVVIHKPIQ---GHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 176 ~~~~~~~~v~~g~pi~---~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
.....+++.+.+|++ .+|..+.++++.+.+|+.+++++
T Consensus 241 -~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~lE~~Ir~~P 281 (303)
T TIGR02207 241 -EDGSGYRLKIDPPLDDFPGDDEIAAAARMNKIVEKMIMRAP 281 (303)
T ss_pred -CCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHcCc
Confidence 111268899988875 35778889999999999988764
No 55
>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated
Probab=99.36 E-value=1.7e-11 Score=98.08 Aligned_cols=161 Identities=11% Similarity=0.104 Sum_probs=116.2
Q ss_pred eEEEEeeecCCC---CCCCEEEEeCCCCCchHHHH-HhcCCceeeeecccccccchHHHHHH----hcCcEEeecCCchh
Q 028090 36 KLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTL-LTLGKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRMDSRS 107 (214)
Q Consensus 36 ~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l-~~~~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~~~~~ 107 (214)
.++++|.|.+.+ .++++|+++-|.++||.... ++...++..+++. .+++.++.++. ..|...+..+.
T Consensus 84 ~~~~~g~e~l~~a~~~gkgvIllt~H~GnwE~~~~~~~~~~~~~~v~r~--~~n~~~~~~~~~~R~~~g~~~i~~~~--- 158 (289)
T PRK08905 84 VKDDHGWEHVEAALAEGRGILFLTPHLGCFEVTARYIAQRFPLTAMFRP--PRKAALRPLMEAGRARGNMRTAPATP--- 158 (289)
T ss_pred eeeecCHHHHHHHHhcCCCEEEEecccchHHHHHHHHHhcCCceEEEEC--CCCHHHHHHHHHHhcccCCceeccCC---
Confidence 467888776543 47899999999999998754 3333566667666 47777777665 33433342111
Q ss_pred HHHHHHHHHHHHhCCCeEEEEeCCeecC-CCCccc-------ccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCccc
Q 028090 108 QLECLKRCMELIKKGASVCFFPEGTRSK-DGKLGA-------FKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGMLNE 179 (214)
Q Consensus 108 ~~~~~~~~~~~l~~g~~~~ifPeG~~~~-~~~~~~-------~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~~~ 179 (214)
..++.+.++|++|+.+.+.+|...+. ++...+ +.+|.+.+|.++++||+|+++.-. ...
T Consensus 159 --~~~~~i~~aLk~g~~v~il~Dq~~~~~~g~~v~FfG~~a~~~~gpa~lA~~~~apvvp~~~~R~-----------~~~ 225 (289)
T PRK08905 159 --QGVRMLVKALRRGEAVGILPDQVPSGGEGVWAPFFGRPAYTMTLVARLAEVTGVPVIFVAGERL-----------PRG 225 (289)
T ss_pred --ccHHHHHHHHhcCCeEEEcCCCCCCCCCceEecCCCCcchHHHHHHHHHHhhCCcEEEEEEEEc-----------CCC
Confidence 24789999999999999999987653 333334 479999999999999999999421 112
Q ss_pred eeEEEEEcCCCC--CCChHHHHHHHHHHHHHHhccCC
Q 028090 180 GTIKVVIHKPIQ--GHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 180 ~~~~v~~g~pi~--~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
+++++.+.+++. .++.++.++++.+.+|+.+++++
T Consensus 226 ~~y~~~~~~~~~~~~~~~~~~t~~~~~~lE~~Ir~~P 262 (289)
T PRK08905 226 RGYRLHLRPVQEPLPGDKAADAAVINAEIERLIRRFP 262 (289)
T ss_pred CcEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHcCc
Confidence 358888887775 45778889999999999888764
No 56
>KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism]
Probab=99.34 E-value=1.1e-10 Score=94.50 Aligned_cols=156 Identities=24% Similarity=0.320 Sum_probs=104.0
Q ss_pred CCCEEEEeCCCCCchHHHHHhc-C-----CceeeeecccccccchHHHHHHhcCcEEeecCCchhHHHHHHHHHHHHhC-
Q 028090 49 DTPAVYVSNHQSFLDIYTLLTL-G-----KSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQLECLKRCMELIKK- 121 (214)
Q Consensus 49 ~~~~i~~~nH~s~~D~~~l~~~-~-----~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~- 121 (214)
+.++|+++||++..|++.++.+ . .+..+++++.+...|++|+.|..+|.++++|...++. +.+.+..+++++
T Consensus 70 ~e~alli~NH~~~~Dwl~~w~~~~~~G~l~~~~~~lK~~lk~~Pi~Gw~~~~~~fiFl~R~~~~d~-~~l~~~~k~l~~~ 148 (346)
T KOG1505|consen 70 KERALLIANHQSEVDWLYLWTYAQRKGVLGNVKIVLKKSLKYLPIFGWGMWFHGFIFLERNWEKDE-KTLISLLKHLKDS 148 (346)
T ss_pred CCceEEEeccccccchhhHHHHHhcCCchhhhhHHHhhHHHhCcchheeeeecceEEEecchhhhH-HHHHHHHHHhccC
Confidence 5799999999999999988632 1 1456788999999999999999999999999766554 778888888875
Q ss_pred --CCeEEEEeCCeecCCC-------------------CcccccccHHHHHHhC---CCc-EEEEEEeCCCccCcCC----
Q 028090 122 --GASVCFFPEGTRSKDG-------------------KLGAFKKGAFSVAAKT---GVP-VVPITLVGTGKIMPSG---- 172 (214)
Q Consensus 122 --g~~~~ifPeG~~~~~~-------------------~~~~~~~g~~~la~~~---~~~-ivpv~i~~~~~~~~~~---- 172 (214)
..++++|||||+-... .+.| +.+.++.|.+. .++ |+-+++.|.....+..
T Consensus 149 ~~~~wLlLFPEGT~~~~~~~~~S~~fa~k~GLp~l~nvLlP-Rt~Gf~~~l~~lr~~l~~IyD~Ti~y~~~~~~~~~~~~ 227 (346)
T KOG1505|consen 149 PDPYWLLLFPEGTRFTEKKHERSQEFAAKNGLPHLKNVLLP-RTKGFKAALEELRNSLDAIYDVTIGYSKAEPPPYETML 227 (346)
T ss_pred CCceEEEEecCCCcccHHHHHHHHHHHHHcCCCCccceecc-CcchHHHHHHHhcCCCceEEEEEEecCCCCCCchhhhe
Confidence 3679999999952211 1122 44444544433 233 7788887765544431
Q ss_pred CCCCccceeEEEEEc-CCCC--CCChHHHHHHHHHHH
Q 028090 173 MEGMLNEGTIKVVIH-KPIQ--GHDAGELCNEARNSI 206 (214)
Q Consensus 173 ~~~~~~~~~~~v~~g-~pi~--~~~~~~~~~~~~~~i 206 (214)
......+..+.+.+- -|++ |+|.+++.+=+.+..
T Consensus 228 ~~~~~~~~~v~ihirr~pi~~IP~de~~~~~WL~~~f 264 (346)
T KOG1505|consen 228 FLLGGEPKEVHIHIRRFPIKEIPEDEEELANWLYDRF 264 (346)
T ss_pred eeccCCCceeEEEEEecccccCCCChHHHHHHHHHHH
Confidence 111233445555554 2444 456666555555544
No 57
>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism]
Probab=99.33 E-value=3.8e-12 Score=108.40 Aligned_cols=151 Identities=22% Similarity=0.250 Sum_probs=109.1
Q ss_pred hHHHHHHHHHHHHHHHhccCceeEEEEeeecCC--CCCCCEEEEeCCCCCchHHHHHh-c---CCceeeeecccccccch
Q 028090 14 YRRKFHHFIAKLWATLTVSPFLKLEIEGLENLP--SSDTPAVYVSNHQSFLDIYTLLT-L---GKSFKFISKTGIFLFPV 87 (214)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~v~v~g~~~l~--~~~~~~i~~~nH~s~~D~~~l~~-~---~~~~~~~~~~~~~~~p~ 87 (214)
++.-..+...++++|.+-..+-.+++++.+... .++++++++..|.|.+|.+++.. + .-....++.--+.+.+.
T Consensus 258 fS~~~vr~~dr~ls~~wn~ly~g~~vq~a~r~r~a~~gheiVyvpcHRShiDylLLsy~ly~ngLvPpHiaAGINLNf~p 337 (810)
T COG2937 258 FSYELIRVLDRILSRGWNRLYQGDEVQNAERRRLALDGHEIVYVPCHRSHIDYLLLSYVLYHNGLVPPHIAAGINLNFWP 337 (810)
T ss_pred ccHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHhhhcCCceEEEecchhhhhHHHHHHHHHhcCCCcchhhccccccCcc
Confidence 344455556666666666666666666655322 13789999999999999987732 2 21122334445567788
Q ss_pred HHHHHHhcCcEEeecCCchhHHH--HH-HHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhC-------CCcE
Q 028090 88 IGWAMSMMGVIPLKRMDSRSQLE--CL-KRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKT-------GVPV 157 (214)
Q Consensus 88 ~~~~~~~~g~~~v~r~~~~~~~~--~~-~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~-------~~~i 157 (214)
+|.++++.|+++|.|+-+..... .+ +.+.+.+.+|+++--|-||+|+..|++++.|.|...+..++ .+-+
T Consensus 338 ~G~i~RR~GAfFIRRsfKgn~LYs~VfrEYl~~Lf~rgysleyfIEGGRSRTGrlL~PKtGmlsmtlqA~Lrg~~rpI~l 417 (810)
T COG2937 338 MGPIFRRGGAFFIRRTFKGNPLYSTVFREYLGELFSRGYSLEYFIEGGRSRTGRLLPPKTGMLSMTLQAMLRGRTRPILL 417 (810)
T ss_pred chHHHHhccceEEEeccCCChhHHHHHHHHHHHHHhCCcceEEEeecCccccCCcCCCccchHHHHHHHHhcCCCCCeEE
Confidence 99999999999999975443332 22 56667888999999999999999999999999999887655 2458
Q ss_pred EEEEEeC
Q 028090 158 VPITLVG 164 (214)
Q Consensus 158 vpv~i~~ 164 (214)
+||+|.|
T Consensus 418 vPvyIgY 424 (810)
T COG2937 418 VPVYIGY 424 (810)
T ss_pred EeeEeeh
Confidence 8999954
No 58
>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=99.31 E-value=7.1e-11 Score=99.05 Aligned_cols=146 Identities=13% Similarity=0.119 Sum_probs=107.0
Q ss_pred CCCCEEEEeCCCCCchHHHH-HhcCCceeeeecccccccchHHHHHH----hcCcEEeecCCchhHHHHHHHHHHHHhCC
Q 028090 48 SDTPAVYVSNHQSFLDIYTL-LTLGKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRMDSRSQLECLKRCMELIKKG 122 (214)
Q Consensus 48 ~~~~~i~~~nH~s~~D~~~l-~~~~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~~~~~~~~~~~~~~~~l~~g 122 (214)
.++|+|+++.|.++||.... .+...+...++++ .++|.++.++. ..|...+... +.++.+.+++++|
T Consensus 138 ~gkGvIllt~H~GNWEl~~~~l~~~~p~~~vyRp--~kNp~ld~li~~~R~r~G~~lI~~~------~giR~liraLk~G 209 (454)
T PRK05906 138 EQEGAILFCGHQANWELPFLYITKRYPGLAFAKP--IKNRRLNKKIFSLRESFKGKIVPPK------NGINQALRALHQG 209 (454)
T ss_pred CCCCEEEEeehhhHHHHHHHHHHcCCCeEEEEec--CCCHHHHHHHHHHHHhcCCeeecCc------hHHHHHHHHHhcC
Confidence 37899999999999998654 3333456666666 47887777665 4555555331 3579999999999
Q ss_pred CeEEEEeCCeecCCCCcccc-------cccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCccceeEEEEEcCCCCC---
Q 028090 123 ASVCFFPEGTRSKDGKLGAF-------KKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGMLNEGTIKVVIHKPIQG--- 192 (214)
Q Consensus 123 ~~~~ifPeG~~~~~~~~~~~-------~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~~~~~~~v~~g~pi~~--- 192 (214)
+.+++.||+..+.++...+| .+|++++|+++++||+|+++.- ...+ +++.+.+|+.+
T Consensus 210 ~~vgiL~DQ~~~~~Gv~VpFFG~~a~T~tgpA~LA~rtgApVVpv~~~R------------~~~g-y~v~i~~~l~~~~~ 276 (454)
T PRK05906 210 EVVGIVGDQALLSSSYSYPLFGSQAFTTTSPALLAYKTGKPVIAVAIYR------------KPNG-YLVVPSKKFYANKS 276 (454)
T ss_pred CEEEEEeCCCCCCCceEeCCCCCccchhhHHHHHHHHhCCeEEEEEEEE------------eCCe-EEEEEEcCccCccc
Confidence 99999999987655555555 7999999999999999999941 1123 77777766632
Q ss_pred ----CChHHHHHHHHHHHHHHhccCC
Q 028090 193 ----HDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 193 ----~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
++..+.++++.+.+|+.+++++
T Consensus 277 ~~~~~d~~~~tq~~n~~LE~~IR~~P 302 (454)
T PRK05906 277 LPIKESTEQLMDRLMRFLEKGIACKP 302 (454)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhCh
Confidence 2445677888888998887653
No 59
>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=99.28 E-value=2.4e-10 Score=91.75 Aligned_cols=161 Identities=14% Similarity=0.097 Sum_probs=112.8
Q ss_pred eEEEEeeecCCC---CCCCEEEEeCCCCCchHHHH-HhcCCceeeeecccccccchHHHHHH----hcCcEEeecCCchh
Q 028090 36 KLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTL-LTLGKSFKFISKTGIFLFPVIGWAMS----MMGVIPLKRMDSRS 107 (214)
Q Consensus 36 ~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l-~~~~~~~~~~~~~~~~~~p~~~~~~~----~~g~~~v~r~~~~~ 107 (214)
.++++|.|.+.+ .++|+|+++-|.++||.+.. .+...+...++++ .+++.++.++. ..|...+...
T Consensus 95 ~~~~~g~e~l~~a~~~gkgvI~lt~H~GnWE~~~~~~~~~~~~~~v~r~--~~n~~~d~~~~~~R~~~g~~~i~~~---- 168 (295)
T PRK05645 95 VREVEGLEVLEQALASGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRP--PKLKAVDELLRKQRVQLGNRVAPST---- 168 (295)
T ss_pred eeEecCHHHHHHHHhcCCCEEEEecchhhHHHHHHHHHhcCCCeEEEeC--CCCHHHHHHHHHHhCCCCCeEeecC----
Confidence 457888777643 47899999999999998754 2322333445544 46777777655 3444444211
Q ss_pred HHHHHHHHHHHHhCCCeEEEEeCCeecC-CCCcccc-------cccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCccc
Q 028090 108 QLECLKRCMELIKKGASVCFFPEGTRSK-DGKLGAF-------KKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGMLNE 179 (214)
Q Consensus 108 ~~~~~~~~~~~l~~g~~~~ifPeG~~~~-~~~~~~~-------~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~~~ 179 (214)
...++++.++|++|+.++|.+|...+. ++...+| .++.+.+|.++++||+|+++... ...
T Consensus 169 -~~~~r~l~kaLk~g~~v~il~Dq~~~~~~gv~v~FfG~~a~t~~~~~~la~~~~~pvv~~~~~r~-----------~~~ 236 (295)
T PRK05645 169 -KEGILSVIKEVRKGGQVGIPADPEPAESAGIFVPFLGTQALTSKFVPNMLAGGKAVGVFLHALRL-----------PDG 236 (295)
T ss_pred -cccHHHHHHHHhcCCeEEEcCCCCCCCCCCeEeCCCCCchhhhhHHHHHHHhhCCeEEEEEEEEc-----------CCC
Confidence 125788999999999999999998653 4444555 45777899999999999999421 112
Q ss_pred eeEEEEEcCCCC---CCChHHHHHHHHHHHHHHhccCC
Q 028090 180 GTIKVVIHKPIQ---GHDAGELCNEARNSIADALGLQS 214 (214)
Q Consensus 180 ~~~~v~~g~pi~---~~~~~~~~~~~~~~i~~~l~~~~ 214 (214)
..+++.+.++++ .++..+.++++.+.+|+.+++++
T Consensus 237 ~~y~i~~~~~~~~~~~~~~~~~t~~~~~~lE~~Ir~~P 274 (295)
T PRK05645 237 SGYKVILEAAPEDMYSTDVEVSAAAMSKVVERYVRAYP 274 (295)
T ss_pred CeEEEEEecCCcCCCCCCHHHHHHHHHHHHHHHHHcCc
Confidence 358888876654 24677889999999999988764
No 60
>PLN02349 glycerol-3-phosphate acyltransferase
Probab=99.16 E-value=1.3e-10 Score=93.65 Aligned_cols=160 Identities=18% Similarity=0.258 Sum_probs=103.5
Q ss_pred CCCEEEEeCCCCCchHHHHHhc--------CCceeeeecccccccchHHHHHHhcCcEEee-cC-----------CchhH
Q 028090 49 DTPAVYVSNHQSFLDIYTLLTL--------GKSFKFISKTGIFLFPVIGWAMSMMGVIPLK-RM-----------DSRSQ 108 (214)
Q Consensus 49 ~~~~i~~~nH~s~~D~~~l~~~--------~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~-r~-----------~~~~~ 108 (214)
+.++|+++||++..|+.++..+ ..++.|++.+.....|+...+..--+.+.|- ++ +.++.
T Consensus 200 g~nVvllsNHQseaDp~ii~llle~~~p~iae~~iyvAGdrv~~DpL~~PFSmGrNLlCVySKKhm~d~Pelke~K~~~N 279 (426)
T PLN02349 200 GHNVVLLSNHQSEADPAVIALLLEKSHPYLAENVTYVAGDRVVTDPLCKPFSMGRNLICVHSKKHMNDDPELKEMKRKAN 279 (426)
T ss_pred CCCEEEEeccccccchHHHHHHHhccCHHHHhhhhhhccceEeeccccCccccCCceEEEEeccccCCChhhHHHHHHHH
Confidence 6899999999999999877332 2456788888777777666643333333332 11 23445
Q ss_pred HHHHHHHHHHHhCC-CeEEEEeCCeecCCCC------cccccccHH----HHHHhCCCc--EEEEEEeCCCccCcCCC--
Q 028090 109 LECLKRCMELIKKG-ASVCFFPEGTRSKDGK------LGAFKKGAF----SVAAKTGVP--VVPITLVGTGKIMPSGM-- 173 (214)
Q Consensus 109 ~~~~~~~~~~l~~g-~~~~ifPeG~~~~~~~------~~~~~~g~~----~la~~~~~~--ivpv~i~~~~~~~~~~~-- 173 (214)
.++++.+...|++| ..++|||||+|++... +.||-+... +++.++++| ++|+++ .+++++|.-.
T Consensus 280 ~kslk~~~~lL~~Gg~~iwIaPsGgRdR~d~~~g~~~papFD~~svd~mR~l~~~s~~ptHfYPlAl-~~yDImPPP~~V 358 (426)
T PLN02349 280 TRTLKEMALLLREGGQLIWIAPSGGRDRPDPLTGEWTPAPFDPSAVDNMRRLTEKSKAPGHFYPLAM-LSYDIMPPPPQV 358 (426)
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCCCCCCCCccCCCccCCCCChHHHHHHHHHHHhcCCCccccchHH-HhCccCCCcccc
Confidence 57888899999985 5689999999987432 345544333 457788888 999999 5777776522
Q ss_pred ------CCCccceeEEEEEcCCCCC-------CCh----HHHHHHHHHHHHHH
Q 028090 174 ------EGMLNEGTIKVVIHKPIQG-------HDA----GELCNEARNSIADA 209 (214)
Q Consensus 174 ------~~~~~~~~~~v~~g~pi~~-------~~~----~~~~~~~~~~i~~~ 209 (214)
.+...+..+-+.+|+-|.. ++. +++++.+.+.+.+.
T Consensus 359 EkeIGE~R~v~F~gvGlsvg~EI~~~~~~~~~~~~~e~r~~~t~~~~~~V~~~ 411 (426)
T PLN02349 359 EKEIGERRLVGFTGVGLSVGEEIDFSDITAACEGGAEAREAFTQAAYASVVEQ 411 (426)
T ss_pred ccccCceeeeeeecceeeeccccchHhhhhhcCChHHHHHHHHHHHHHHHHHH
Confidence 1222334566777887773 333 44555555554443
No 61
>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Probab=99.10 E-value=6.2e-10 Score=88.75 Aligned_cols=172 Identities=16% Similarity=0.251 Sum_probs=111.4
Q ss_pred ceeEEEEeeecCCCCCCCEEEEe-CCCC-CchHHHHHh--------cCC--ceeeeecccccccchHHHHHHhcCcEEee
Q 028090 34 FLKLEIEGLENLPSSDTPAVYVS-NHQS-FLDIYTLLT--------LGK--SFKFISKTGIFLFPVIGWAMSMMGVIPLK 101 (214)
Q Consensus 34 ~~~v~v~g~~~l~~~~~~~i~~~-nH~s-~~D~~~l~~--------~~~--~~~~~~~~~~~~~p~~~~~~~~~g~~~v~ 101 (214)
++.+++...+++++ ++++|+.+ +|.- ....+..++ ..+ +...++-...+..|+++.++...|++.++
T Consensus 48 YFp~~l~~~~~l~p-~~~Yif~~hPHGvl~~g~~~~f~t~~~~~~~~fpg~~~~~~tl~~~f~~P~~R~~~~~~G~~~~s 126 (297)
T PF03982_consen 48 YFPIRLVKTADLDP-DKNYIFGFHPHGVLPIGAFVNFATDATGFSKLFPGIRPHLLTLSVNFRIPFFRDFLLWLGAVSAS 126 (297)
T ss_pred ccceEEEecccCCc-CCceEEeeCCCccccCcchhcccccccCcchhCCCcceeEEEeccceeccccchhhhhccccccc
Confidence 35667777777886 67877755 4542 222221111 111 12344455678999999999999999998
Q ss_pred cCCchhHHHHHHHHHHHHhCCCeEEEEeCCeecC-----CC--CcccccccHHHHHHhCCCcEEEEEEeCCCccCcC---
Q 028090 102 RMDSRSQLECLKRCMELIKKGASVCFFPEGTRSK-----DG--KLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPS--- 171 (214)
Q Consensus 102 r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~-----~~--~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~--- 171 (214)
|++ ++.+.+.-..|++++|.|.|.... +. ...+=++|..++|.++|+++|||+..|.++.+..
T Consensus 127 r~s-------~~~~L~~~~~G~~v~ivpGG~~E~l~~~p~~~~l~lk~RkGFvklAl~~Ga~LVPv~~FGE~d~~~~~~~ 199 (297)
T PF03982_consen 127 RES-------IRYLLSRGGSGNAVVIVPGGAAEALLAHPGRERLYLKNRKGFVKLALQHGAPLVPVYSFGENDLYDQVQN 199 (297)
T ss_pred ccc-------cceeecccCCCceeeeccCcHHHHhhcCCCceEEEECCcchHHHhHHHcCCcEEeEEEeCChhheeeccC
Confidence 743 233333333467799999998532 11 1234489999999999999999999876544321
Q ss_pred -------------------------CC--C------CCccceeEEEEEcCCCCC--------CChHHHHHHHHHHHHHHh
Q 028090 172 -------------------------GM--E------GMLNEGTIKVVIHKPIQG--------HDAGELCNEARNSIADAL 210 (214)
Q Consensus 172 -------------------------~~--~------~~~~~~~~~v~~g~pi~~--------~~~~~~~~~~~~~i~~~l 210 (214)
+. + ..+++..+++.+|+||+. ||.+++.++..++++++.
T Consensus 200 ~~~~~~r~~q~~~~~~~g~~~~~f~Grg~f~~~~~gllP~r~pi~~VVG~PI~v~~~~~Pt~e~Vd~~H~~Y~~~L~~LF 279 (297)
T PF03982_consen 200 PPGSWLRRFQRWLKKKFGFSLPLFWGRGIFPSYSFGLLPYRRPITTVVGKPIPVPKIENPTQEDVDKLHARYIEALRELF 279 (297)
T ss_pred CchhHHHHHHHHHHHHcCcceeeeecccccCCCcccccccCCceEEEeeceecccCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 10 0 022346799999999983 245667777777777776
Q ss_pred ccC
Q 028090 211 GLQ 213 (214)
Q Consensus 211 ~~~ 213 (214)
+++
T Consensus 280 d~~ 282 (297)
T PF03982_consen 280 DKH 282 (297)
T ss_pred HHH
Confidence 654
No 62
>KOG4321 consensus Predicted phosphate acyltransferases [Lipid transport and metabolism]
Probab=98.94 E-value=1.3e-09 Score=78.10 Aligned_cols=168 Identities=20% Similarity=0.311 Sum_probs=114.1
Q ss_pred hHHHHHHHHHHHHHHHhccCceeEEEEeeecCCCCCCCEEEEeCCCC-CchHHHHHh---c-CCc-eeeeecccccccch
Q 028090 14 YRRKFHHFIAKLWATLTVSPFLKLEIEGLENLPSSDTPAVYVSNHQS-FLDIYTLLT---L-GKS-FKFISKTGIFLFPV 87 (214)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~v~v~g~~~l~~~~~~~i~~~nH~s-~~D~~~l~~---~-~~~-~~~~~~~~~~~~p~ 87 (214)
+.+..+...+.+|.. ..+.+...++.|.|+.|+ ++|.+++.-|.. .+|...+.+ + ..+ +..+...-+++.|-
T Consensus 10 fwrvgrkivaaiwda-hariyhgyeviglenvpq-egpalivyyhgaipidmyylnsrmllqrerliytigdrflfklpg 87 (279)
T KOG4321|consen 10 FWRVGRKIVAAIWDA-HARIYHGYEVIGLENVPQ-EGPALIVYYHGAIPIDMYYLNSRMLLQRERLIYTIGDRFLFKLPG 87 (279)
T ss_pred HHHHhHHHHHHHHhh-hhhhccceeEeecccCCC-cCceEEEEEcCccceeeeeechHHHHhhhhheEeecceeEEeCCC
Confidence 344455666777765 456677889999999998 899999999997 678776633 1 223 34455556677786
Q ss_pred HHHHHHhcCcEEeecCCchhHHHHHHHHHHHHhCCCeEEEEeCCeecCC--CCcc----cccccHHHHHHhCCCcEEEEE
Q 028090 88 IGWAMSMMGVIPLKRMDSRSQLECLKRCMELIKKGASVCFFPEGTRSKD--GKLG----AFKKGAFSVAAKTGVPVVPIT 161 (214)
Q Consensus 88 ~~~~~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~--~~~~----~~~~g~~~la~~~~~~ivpv~ 161 (214)
.+.+..++.. .. .++..|++.+++|..+.|.|.|..... .... +=+-|.++.|.++++||+|++
T Consensus 88 wgtiseafhv---sp-------gtvqscvsilrdgnllaispggvyeaqfgdhyyellwrnrvgfakvaieakapiipcf 157 (279)
T KOG4321|consen 88 WGTISEAFHV---SP-------GTVQSCVSILRDGNLLAISPGGVYEAQFGDHYYELLWRNRVGFAKVAIEAKAPIIPCF 157 (279)
T ss_pred ccchhhhhcc---CC-------ccHHHHHHhhccCcEEEEcCCceeeeccchHHHHHHHhccccceeeeeecCCCccchh
Confidence 6666554433 21 146889999999999999999987552 2222 237799999999999999999
Q ss_pred EeCCCccCcC------------CCCC-------CccceeEEEEEcCCCCCC
Q 028090 162 LVGTGKIMPS------------GMEG-------MLNEGTIKVVIHKPIQGH 193 (214)
Q Consensus 162 i~~~~~~~~~------------~~~~-------~~~~~~~~v~~g~pi~~~ 193 (214)
.++....+.. ++-+ -..+.+++...|+||+.+
T Consensus 158 tqnlregfrqvgifrtffmrlynkvripvypiyggfpvkfrtylgkpipyd 208 (279)
T KOG4321|consen 158 TQNLREGFRQVGIFRTFFMRLYNKVRIPVYPIYGGFPVKFRTYLGKPIPYD 208 (279)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhhcccceeeeccCCcceeehhhcCCCCCCC
Confidence 9754322111 0000 011357788889999854
No 63
>KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism]
Probab=98.93 E-value=5.7e-09 Score=86.68 Aligned_cols=150 Identities=23% Similarity=0.325 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHhccCceeE--EEEeeecCCC---CCCCEEEEeCCCCCchHHHH-Hh---cCCceeeeecccccccc
Q 028090 16 RKFHHFIAKLWATLTVSPFLKL--EIEGLENLPS---SDTPAVYVSNHQSFLDIYTL-LT---LGKSFKFISKTGIFLFP 86 (214)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~v--~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l-~~---~~~~~~~~~~~~~~~~p 86 (214)
...+.+..+.|..+..+....+ ..+-.|-+.. .+-|.|+++-|+|.+|.+++ |- ..-+..+++.-.+.++|
T Consensus 119 ~~~~~~~s~~lykl~~~~~~~~~~~~~~~e~l~~a~~tg~PliFlPlHRSHlDYlliTwIL~~~~Ik~P~iAsGNNLnIP 198 (715)
T KOG3729|consen 119 KFICKCCSYVLYKVFRRLMDKLLVCKEEMEVLYEAEQTGIPMVFLPLHRSHLDYLLITWILWHFGIKLPHIASGNNLNIP 198 (715)
T ss_pred hhhHHHHHHHHHHHHHHHhhhHhhhHHHHHHHHHHhhcCCceEEEecchhhhhHHHHHHHHHhcCcCCceeccCCccccc
Confidence 3445555556665555544333 2222222211 25699999999999998876 32 23345678888889999
Q ss_pred hHHHHHHhcCcEEeecCC-----chhH---HHHH-HHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhC----
Q 028090 87 VIGWAMSMMGVIPLKRMD-----SRSQ---LECL-KRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKT---- 153 (214)
Q Consensus 87 ~~~~~~~~~g~~~v~r~~-----~~~~---~~~~-~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~---- 153 (214)
.++++++..|+++|.|.- ++++ +..+ -.+.+.|+++..+-+|-||||++.++..-.+.|.......+
T Consensus 199 ~Fg~Llr~LGaFFIrRriDp~~~G~KDVLYRA~LH~yi~~~L~Q~~~iEfFlEGtRsR~GK~~~pk~GlLSVvV~a~~~g 278 (715)
T KOG3729|consen 199 GFGWLLRALGAFFIRRRVDPDDEGGKDVLYRAILHSYIEQVLSQDMPIEFFLEGTRSRFGKALTPKNGLLSVVVEAVQHG 278 (715)
T ss_pred hHHHHHHhcchheeeeccCCCcccchhHHHHHHHHHHHHHHHhCCCceEEEEeccccccCCcCCcccccHHHHHHHHhcC
Confidence 999999999999998741 1111 1223 35668889999999999999999888877899987765544
Q ss_pred ---CCcEEEEEEeCC
Q 028090 154 ---GVPVVPITLVGT 165 (214)
Q Consensus 154 ---~~~ivpv~i~~~ 165 (214)
++-+|||.+.|.
T Consensus 279 ~IPD~LlvPVs~~Yd 293 (715)
T KOG3729|consen 279 FIPDCLLVPVSYTYD 293 (715)
T ss_pred CCCceEEEeeeccHH
Confidence 455999999764
No 64
>PRK15174 Vi polysaccharide export protein VexE; Provisional
Probab=98.87 E-value=6.2e-08 Score=85.96 Aligned_cols=157 Identities=13% Similarity=0.098 Sum_probs=101.8
Q ss_pred eEEEEeeec-CCC---CCCCEEEEeCCCCCchHHHHH-hc-CCceeeeecccccccchHHHHHHhcCcEEeecCCchhHH
Q 028090 36 KLEIEGLEN-LPS---SDTPAVYVSNHQSFLDIYTLL-TL-GKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQL 109 (214)
Q Consensus 36 ~v~v~g~~~-l~~---~~~~~i~~~nH~s~~D~~~l~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~ 109 (214)
.+++.+.+. +.. .++|+|+++-|.++||....+ +. ..++..+++... .+-...|...|..++. ...
T Consensus 461 ~~~~~~~~~~l~~a~~~~kgvi~~t~H~gnwE~~~~~~~~~~~~~~~i~r~~~-------~~R~~~g~~~i~~~~~-~~~ 532 (656)
T PRK15174 461 LADISHVEQFFQRLQLDQRGCIIVSAHLGAMYAGPMILSLLEMNSKWVASTPG-------VLKGGYGERLISVSDK-SEA 532 (656)
T ss_pred HhhhhhHHHHHHHHHhcCCCEEEEecCcchhhHHHHHHHHcCCCceeeecchH-------HHHHhcCCceeccCCC-Ccc
Confidence 355544443 332 478999999999999987653 32 235555555532 2335666666643211 112
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCeecCCCCccc-------ccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCccceeE
Q 028090 110 ECLKRCMELIKKGASVCFFPEGTRSKDGKLGA-------FKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGMLNEGTI 182 (214)
Q Consensus 110 ~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~-------~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~~~~~~ 182 (214)
..++.+.+++++|..++|.+|...+.++...+ +..|++++|.++++||+|+++... .....+
T Consensus 533 ~~~r~i~~aLk~g~~v~il~Dq~~~~~~~~v~FfG~~a~~~~g~~~lA~~~~~pvv~~~~~~~-----------~~~~~y 601 (656)
T PRK15174 533 DVVRACMQTLHSGQSLVVAIDGALNLSAPTIDFFGQQITYSTFCSRLAWKMHLPTVFSVPIWK-----------NRHIHF 601 (656)
T ss_pred hHHHHHHHHHHcCCeEEEEeCCCCCCCCceeccCCCccCcCcHHHHHHHHHCCCEEEeEEEEe-----------cCceeE
Confidence 35788999999999999999988654443334 489999999999999999999321 112358
Q ss_pred EEEEcCCCCCC-ChHHHHHHHHHHHHHHhc
Q 028090 183 KVVIHKPIQGH-DAGELCNEARNSIADALG 211 (214)
Q Consensus 183 ~v~~g~pi~~~-~~~~~~~~~~~~i~~~l~ 211 (214)
++++.+|...+ +..+.++++.+.+++.++
T Consensus 602 ~l~~~~~~~~~~~~~~~~~~~~~~y~~~l~ 631 (656)
T PRK15174 602 VLERMVDPLKFESQLSFTERWKENYLQCVT 631 (656)
T ss_pred EEEecCCCccchhHHHHHHHHHHHHHHHHH
Confidence 88888776542 445555555555555444
No 65
>KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism]
Probab=98.70 E-value=2.4e-08 Score=81.97 Aligned_cols=176 Identities=18% Similarity=0.222 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHHhccCceeEEEE--eeecCCC--CCCCEEEEeCCCCCchHHHHHh-c---CCce-eeeecccccccc
Q 028090 16 RKFHHFIAKLWATLTVSPFLKLEIE--GLENLPS--SDTPAVYVSNHQSFLDIYTLLT-L---GKSF-KFISKTGIFLFP 86 (214)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~v~v~--g~~~l~~--~~~~~i~~~nH~s~~D~~~l~~-~---~~~~-~~~~~~~~~~~p 86 (214)
-...+.+.........++..++.|. +..++++ .+.|+++++.|.|.+|++++.. | .-.+ .+.+.-+.....
T Consensus 112 l~~IR~cg~ai~ki~k~i~dg~yVNe~~~~~vr~~~~k~pV~~lPSHrsY~DFlllS~icy~YDi~iP~IAAGmDF~sMk 191 (685)
T KOG3730|consen 112 LAIIRWCGIAITKIGKRICDGFYVNEASMANVRKDMGKCPVLYLPSHRSYMDFLLLSYICYYYDIEIPGIAAGMDFHSMK 191 (685)
T ss_pred hHHHHHHHHHHHHHHHHHhcceeECHHHHHHHHHHhccCCEEEeccchhHHHHHHHHHHHHhccCCCchhhcccchHhhh
Confidence 3344555555556666666666652 3333433 3679999999999999988732 2 2222 334444445677
Q ss_pred hHHHHHHhcCcEEeecCCchhHH--HHH-HHHHHHHhCCC-eEEEEeCCeecCCCCcccccccHHHHHHhC-------CC
Q 028090 87 VIGWAMSMMGVIPLKRMDSRSQL--ECL-KRCMELIKKGA-SVCFFPEGTRSKDGKLGAFKKGAFSVAAKT-------GV 155 (214)
Q Consensus 87 ~~~~~~~~~g~~~v~r~~~~~~~--~~~-~~~~~~l~~g~-~~~ifPeG~~~~~~~~~~~~~g~~~la~~~-------~~ 155 (214)
..+.++++.|+.+++|+-+.+.. ... +.+..++.+++ .+-.|-||||++..+.+..+-|...++.+. ++
T Consensus 192 ~mg~~LR~sGAFFMRRsFg~d~LYWaVFsEYv~t~v~N~~~~VEFFiEgTRSR~~K~L~PK~GlL~mvlePyf~geV~Dv 271 (685)
T KOG3730|consen 192 GMGTMLRKSGAFFMRRSFGNDELYWAVFSEYVYTLVANYHIGVEFFIEGTRSRNFKALVPKIGLLSMVLEPYFTGEVPDV 271 (685)
T ss_pred HHHHHHHhcccceeeeccCCceehHHHHHHHHHHHHhcCCCceEEEEeecccccccccCcchhhHHHHHhhhhcCCcCce
Confidence 88999999999999997654443 223 34445556664 478899999999888777799999888654 45
Q ss_pred cEEEEEEeCCC-----------ccCcCCC--C---------CCccceeEEEEEcCCCC
Q 028090 156 PVVPITLVGTG-----------KIMPSGM--E---------GMLNEGTIKVVIHKPIQ 191 (214)
Q Consensus 156 ~ivpv~i~~~~-----------~~~~~~~--~---------~~~~~~~~~v~~g~pi~ 191 (214)
-||||.+.|.. ...|+-+ . ...+.|.+.+.||+||+
T Consensus 272 ~iVPVSv~YdkILEE~LyvYELLGvPKPKEST~gllKArkil~e~fGs~fl~FGePIS 329 (685)
T KOG3730|consen 272 MIVPVSVAYDKILEEQLYVYELLGVPKPKESTKGLLKARKILDERFGSMFLDFGEPIS 329 (685)
T ss_pred EEEEeeecHHHHHHHHHHHHHHhCCCCcccchhHHHHHHHHHHhhcCcEEEecCCCcc
Confidence 59999997641 1111110 0 01235789999999998
No 66
>KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=98.51 E-value=3.2e-07 Score=74.01 Aligned_cols=171 Identities=20% Similarity=0.228 Sum_probs=103.3
Q ss_pred eeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHhcCCceeeeecccccccchH-HHHHHhcCcEEeecCCchhHHHHHH
Q 028090 35 LKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLTLGKSFKFISKTGIFLFPVI-GWAMSMMGVIPLKRMDSRSQLECLK 113 (214)
Q Consensus 35 ~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~~~~~~~~~~~~~~~~~p~~-~~~~~~~g~~~v~r~~~~~~~~~~~ 113 (214)
..+..++.+..+. ++.+.++||+|.+|..++... .....+...+.....++ +.+......+...|..-.+..-..+
T Consensus 124 ~~i~~~~~~~~~~--~g~i~v~nh~Sp~d~~vls~~-~~~~~v~q~~~~~v~viq~~~~~~s~~~~f~~~e~~d~~~~~~ 200 (354)
T KOG2898|consen 124 LRISFHDELLLFP--EGGICVANHFSPWDVLVLSVD-NCYALVGQVHGGLVGVIQLALSRASLHFWFERLEFTDRQVVAK 200 (354)
T ss_pred hhhcccChhhcCC--CCCCceecccCceeEEEeccc-cchheeeecccceEEEeeehhhhhchhhhhhcchhhhhHhhhh
Confidence 4556666666653 347889999999998765332 11111111111111111 1222333444444544333333446
Q ss_pred HHHHHHhCCC--eEEEEeCCeecCCCCccccc-ccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCcc------------
Q 028090 114 RCMELIKKGA--SVCFFPEGTRSKDGKLGAFK-KGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGMLN------------ 178 (214)
Q Consensus 114 ~~~~~l~~g~--~~~ifPeG~~~~~~~~~~~~-~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~~------------ 178 (214)
...++..++. .+++||||++-.+.....|+ +|.+. .+..+.|+++.+.......-+....+
T Consensus 201 ~~~e~~~~~~~~~ii~fpegtCinn~~~~~fk~k~~~e----~~~~i~pvaik~~~~~~~~f~~s~~~s~~~~l~~~~ts 276 (354)
T KOG2898|consen 201 RLAEHVWNERKEPILLFPEGTCINNTKVMQFKLKGSFE----EGVKIYPVAIKYDPRFGDAFWNSPELSFTRYLLELMTS 276 (354)
T ss_pred hhhHHHhcCCCCcEEEeecceeeCCceeEEEecCCChh----hcceeeeeeeecCccccccccCCccccHHHHHHHHHhh
Confidence 6667776665 79999999999988777777 76644 67889999999876543332211110
Q ss_pred -ceeEEEEEcCCCCC---CChHHHHHHHHHHHHHHhcc
Q 028090 179 -EGTIKVVIHKPIQG---HDAGELCNEARNSIADALGL 212 (214)
Q Consensus 179 -~~~~~v~~g~pi~~---~~~~~~~~~~~~~i~~~l~~ 212 (214)
.-...+...+|+.. +|..+++.++++.+......
T Consensus 277 ~~~v~~i~~l~~~~r~~~et~t~~a~~v~~~ig~~~gl 314 (354)
T KOG2898|consen 277 WAIVCDIWYLPPMRRDNDETATQFANRVKSLIGKSAGL 314 (354)
T ss_pred hheeeeeeecccEEeecccchhHHHHHHHHHHHHhhCC
Confidence 12356777888874 57788999999988776543
No 67
>KOG0831 consensus Acyl-CoA:diacylglycerol acyltransferase (DGAT) [Lipid transport and metabolism]
Probab=98.28 E-value=1.8e-05 Score=62.72 Aligned_cols=127 Identities=18% Similarity=0.309 Sum_probs=82.0
Q ss_pred CceeEEEEeeecCCCCCCCEEEEeCCCC-CchHH-----H-----HHhcCC--ceeeeecccccccchHHHHHHhcCcEE
Q 028090 33 PFLKLEIEGLENLPSSDTPAVYVSNHQS-FLDIY-----T-----LLTLGK--SFKFISKTGIFLFPVIGWAMSMMGVIP 99 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~~~~~~i~~~nH~s-~~D~~-----~-----l~~~~~--~~~~~~~~~~~~~p~~~~~~~~~g~~~ 99 (214)
-++.+.++-..+++. ++++|+- -|.- .+-.. . .....+ +...++....+..|+++.+....|.+.
T Consensus 85 ~YFPi~L~kt~~l~p-~~NYi~g-~hPHgi~~~gaf~~f~t~~s~~~~~fPgi~~~l~tl~~~F~~P~~Re~l~~~Gl~s 162 (334)
T KOG0831|consen 85 DYFPISLIKTAELDP-EKNYIFG-YHPHGILSVGAFGNFSTEATGFSKLFPGIRPKLMTLSGQFYTPFLREYLMSLGLCS 162 (334)
T ss_pred hccceeEEeeeccCC-ccceEEE-eccchhhccccccccceeccchhhhCCCCCHHHcccccceeccHHHHHHHHcCCcc
Confidence 335566655556664 6676664 3432 11111 0 011111 234556667789999999999999999
Q ss_pred eecCCchhHHHHHHHHHHHHhCCCeEEEEeCCeecC----CC---CcccccccHHHHHHhCCCcEEEEEEeCCCcc
Q 028090 100 LKRMDSRSQLECLKRCMELIKKGASVCFFPEGTRSK----DG---KLGAFKKGAFSVAAKTGVPVVPITLVGTGKI 168 (214)
Q Consensus 100 v~r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~----~~---~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~ 168 (214)
++|+ ++....+.-.+|++++|-..|--.. .+ -.+.=++|..++|.++|+.++|++..|-++.
T Consensus 163 vSk~-------s~~~~Ls~~~~Gnav~IVvGGAqEaL~s~PG~~~L~Lk~RkGFVklAl~tGs~LVP~~sFGE~di 231 (334)
T KOG0831|consen 163 VSRE-------SIEYLLSKKGKGNAVVIVVGGAQEALDSHPGKNTLTLKNRKGFVKLALQTGASLVPVFSFGENDV 231 (334)
T ss_pred ccHH-------HHHHHhccCCCCCEEEEEeCchHHHHHhCCCCceEEEeccccHHHHHHHhCCCcCceeeccccee
Confidence 8763 3455555555678999999887421 12 1234489999999999999999999774433
No 68
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=98.17 E-value=9e-06 Score=51.04 Aligned_cols=60 Identities=18% Similarity=0.260 Sum_probs=53.8
Q ss_pred eeecccccccchHHHHHHhcCcEEeecCCchhHHHHHHHHHHHHhCCCeEEEEeCCeecC
Q 028090 76 FISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQLECLKRCMELIKKGASVCFFPEGTRSK 135 (214)
Q Consensus 76 ~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~ 135 (214)
.+.-+...+..++..+++.+|...|..++.+...++++++.+.+++|.++.|.|||.+++
T Consensus 13 ~~lvS~s~DGe~ia~~~~~~G~~~iRGSs~rgg~~Alr~~~~~lk~G~~~~itpDGPrGP 72 (74)
T PF04028_consen 13 AALVSRSRDGELIARVLERFGFRTIRGSSSRGGARALREMLRALKEGYSIAITPDGPRGP 72 (74)
T ss_pred EEEEccCcCHHHHHHHHHHcCCCeEEeCCCCcHHHHHHHHHHHHHCCCeEEEeCCCCCCC
Confidence 344445678889999999999999999999999999999999999999999999999876
No 69
>COG3176 Putative hemolysin [General function prediction only]
Probab=97.68 E-value=7.3e-05 Score=59.08 Aligned_cols=131 Identities=14% Similarity=0.146 Sum_probs=88.8
Q ss_pred CceeEEEEeeecCCCCCCCEEEEeCCCCCchHHHHHh----cCCceeeeecc-cccccchHHHHHHhcCcEEeecC---C
Q 028090 33 PFLKLEIEGLENLPSSDTPAVYVSNHQSFLDIYTLLT----LGKSFKFISKT-GIFLFPVIGWAMSMMGVIPLKRM---D 104 (214)
Q Consensus 33 ~~~~v~v~g~~~l~~~~~~~i~~~nH~s~~D~~~l~~----~~~~~~~~~~~-~~~~~p~~~~~~~~~g~~~v~r~---~ 104 (214)
+..++...+.+..+. +++++.+|||....|..+... +...+.++.++ -...+|++.... ++|+.- .
T Consensus 64 l~~~l~~~~~~~~~d-~d~fd~VcnHlgv~Dg~~~~d~~~~~vgtyR~l~~~~A~r~~~~ys~~e-----f~v~~~~~~~ 137 (292)
T COG3176 64 LDARLDAAALERIPD-QDRFDIVCNHLGVRDGVIVADLLKQLVGTYRLLANAQALRAGGFYSALE-----FPVDWLEELR 137 (292)
T ss_pred cCcccccccccccCC-CCCeeEeccccceecccchhhhHhhhcCceEEeehHHHHHhCCCccccc-----cceeeecccC
Confidence 445666666666664 889999999988899877643 34556666663 334556554433 444422 2
Q ss_pred ch-hHHHHHHHHHHHHhCCCeEEEEeCCeecC--CC--CcccccccHHHHHHhCCCcEEEEEEeCCCccC
Q 028090 105 SR-SQLECLKRCMELIKKGASVCFFPEGTRSK--DG--KLGAFKKGAFSVAAKTGVPVVPITLVGTGKIM 169 (214)
Q Consensus 105 ~~-~~~~~~~~~~~~l~~g~~~~ifPeG~~~~--~~--~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~ 169 (214)
.+ ........+.+.+++|+.+.+||.|.... .+ ...+++.++..++++.++++.|+++.+.+...
T Consensus 138 ~~k~~e~grscv~~~yr~g~tl~lfwaG~~ay~~~g~~~~~~gcaS~~~~~~~~~a~~~p~~~~~r~~~~ 207 (292)
T COG3176 138 PKKFNELGRSCVHREYREGRTLLLFWAGLVAYLDKGRLDDMPGCASVPGLPRKHGAALAPVHHNGRNSAL 207 (292)
T ss_pred hHHHHHHHHHHHHHHHhcCCEEEEeccchhHHhhccCcccCccccccccchhhcccccchhheecccCCc
Confidence 22 22335567778999999999999998654 12 34566777777888999999999998655443
No 70
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=97.13 E-value=0.0014 Score=52.17 Aligned_cols=149 Identities=8% Similarity=-0.231 Sum_probs=98.8
Q ss_pred EEeCCCCCchHHHHHhcCCceeeeecccccccchHHHHHHhcCcEEeecCCchhHHHHHHHHHHHHh-CCC--eEEEEeC
Q 028090 54 YVSNHQSFLDIYTLLTLGKSFKFISKTGIFLFPVIGWAMSMMGVIPLKRMDSRSQLECLKRCMELIK-KGA--SVCFFPE 130 (214)
Q Consensus 54 ~~~nH~s~~D~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~r~~~~~~~~~~~~~~~~l~-~g~--~~~ifPe 130 (214)
....|.|..|-.+.-+- ...+.+++....+.|.+++.......+.+.|....+...+++.+...-. .|. ++++|||
T Consensus 11 ~s~p~ss~~d~~~~~s~-s~~s~v~~~~~~~~~~~~r~~~y~~~~l~~~~~~ds~k~tV~~i~~~~~~~~~~~qIll~~~ 89 (412)
T KOG4666|consen 11 NSNPPSSKEDRPLLKSE-SDLAAAIEELDKKFAPYARTDLYGTMGLGPFPMTENIKLAVALVTLVPLRFLLSMSILLLYY 89 (412)
T ss_pred cCCCCccccccchhhhc-ccHHHHHHhhcccCCchhhhhhhccceeccCCChHHHHHHHHHHHHhhhccCCCceeeeeec
Confidence 33456677775544321 1235566667778999999999989999999887777777776665444 444 3899999
Q ss_pred CeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCc-------------cceeEEEEEcCCCCCC----
Q 028090 131 GTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGML-------------NEGTIKVVIHKPIQGH---- 193 (214)
Q Consensus 131 G~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~-------------~~~~~~v~~g~pi~~~---- 193 (214)
|+|. .+..|++|.+ --++|+.|+.+.+.++.-...+ |.. -...+.+++.+.-.|+
T Consensus 90 ~~C~---~~~~Fk~~~~----~P~~~~q~~~l~y~n~~~~~t~-Wq~~~~v~~~~~~~~~l~~~~~~~~i~~~~P~~ee~ 161 (412)
T KOG4666|consen 90 LICR---VFTLFSAPYR----GPEEEEDEGGVVFQEDYAHMEG-WKRTVIVRSGRFLSRVLLFVFGFYWIHESCPDRDSD 161 (412)
T ss_pred cceE---EEEEecCCcc----CCCCCcCcceEeccccccceec-cccchHHHHHHHHHHHHHhheeEEEEeccCCChhhh
Confidence 9996 5677888873 3799999999988765544333 211 1235667776544443
Q ss_pred -ChHHHHHHHHHHHHHHhc
Q 028090 194 -DAGELCNEARNSIADALG 211 (214)
Q Consensus 194 -~~~~~~~~~~~~i~~~l~ 211 (214)
|..-.+..++..|++++.
T Consensus 162 ~d~~~~at~v~~~maealg 180 (412)
T KOG4666|consen 162 MDSNPKTTSTEINMAEALG 180 (412)
T ss_pred cCCcccchhHHHHHHHhhC
Confidence 344556667777776654
No 71
>COG4261 Predicted acyltransferase [General function prediction only]
Probab=94.60 E-value=1.7 Score=33.88 Aligned_cols=134 Identities=14% Similarity=0.190 Sum_probs=87.0
Q ss_pred eeEEEEeeecCCC---CCCCEEEEeCCCCCchHHHHHh-c--CCceeeeecccccccchHHHHHH------hcCcEEeec
Q 028090 35 LKLEIEGLENLPS---SDTPAVYVSNHQSFLDIYTLLT-L--GKSFKFISKTGIFLFPVIGWAMS------MMGVIPLKR 102 (214)
Q Consensus 35 ~~v~v~g~~~l~~---~~~~~i~~~nH~s~~D~~~l~~-~--~~~~~~~~~~~~~~~p~~~~~~~------~~g~~~v~r 102 (214)
.+|...|.+.+.- ++.+.++++.|.+..+.+=-.+ . ..++..++.+++. .-++.++. ..+.+++..
T Consensus 97 frvr~~g~a~~~a~la~grG~ll~gsHLGsfEv~RALatth~~~ki~~vvy~e~a--rr~n~~laa~nPe~a~~li~vg~ 174 (309)
T COG4261 97 FRVRFAGGAEAAADLADGRGKLLLGSHLGSFEVCRALATTHGYKKINAVVYSENA--RRFNQILAAMNPEAAINLIPVGD 174 (309)
T ss_pred ceeeccCchhHHHHHhCCCceEEehhhcccHHHHHHHHhcCCCceEEEEEeHHhH--HHHHHHHHhhChhhccCcccccc
Confidence 6677777665432 4789999999999999874332 2 2345555555432 22334333 233445543
Q ss_pred CCchhHHHHHHHHHHHHhCCCeEEEEeCCeecC-----------CCCcccccccHHHHHHhCCCcEEEEEEeCCCccCcC
Q 028090 103 MDSRSQLECLKRCMELIKKGASVCFFPEGTRSK-----------DGKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPS 171 (214)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~-----------~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~ 171 (214)
- +..++..+.+++.+|..+.|.-|-..-. -+...+|..|.+.+|...++||+-++.-+.
T Consensus 175 ~----~patai~~kealdagemvaiv~DR~~~re~d~~v~~m~FlGapA~FpqgP~ilAaaLk~PV~l~fgLy~------ 244 (309)
T COG4261 175 I----GPATAILLKEALDAGEMVAIVGDRIAVREQDWRVCWMSFLGAPAPFPQGPFILAAALKCPVNLIFGLYQ------ 244 (309)
T ss_pred c----CHHHHHHHHHHhcCCceEEEeeccccccCCCceEeeHhhcCCCCCCCCCHHHHHHHhCCCeEEEEEeee------
Confidence 2 2346678888999999988876533222 123467899999999999999998887432
Q ss_pred CCCCCccceeEEEEEc
Q 028090 172 GMEGMLNEGTIKVVIH 187 (214)
Q Consensus 172 ~~~~~~~~~~~~v~~g 187 (214)
.+++++.|.
T Consensus 245 -------~~~y~l~fE 253 (309)
T COG4261 245 -------HGKYHLHFE 253 (309)
T ss_pred -------CCeeEEEEe
Confidence 357888776
No 72
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=64.67 E-value=32 Score=30.29 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=53.7
Q ss_pred ccchHHHHHHhcCcEEeecCCchhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEe
Q 028090 84 LFPVIGWAMSMMGVIPLKRMDSRSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLV 163 (214)
Q Consensus 84 ~~p~~~~~~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~ 163 (214)
+..+...++...|.+.+++..-......+..+.++|++|.+++| |.|... ..-+.....+|.+.++++..+++.
T Consensus 382 KST~A~~l~~~~g~~~vn~D~lg~~~~~~~~a~~~L~~G~sVVI--DaTn~~----~~~R~~~i~lAk~~gv~v~~i~~~ 455 (526)
T TIGR01663 382 KSHFCKKFFQPAGYKHVNADTLGSTQNCLTACERALDQGKRCAI--DNTNPD----AASRAKFLQCARAAGIPCRCFLFN 455 (526)
T ss_pred HHHHHHHHHHHcCCeEECcHHHHHHHHHHHHHHHHHhCCCcEEE--ECCCCC----HHHHHHHHHHHHHcCCeEEEEEeC
Confidence 45566777778889988875544444566778889999999887 433322 223566788999999999988885
No 73
>COG4365 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=56.26 E-value=29 Score=29.39 Aligned_cols=56 Identities=25% Similarity=0.251 Sum_probs=38.3
Q ss_pred HHHHHHHHHhCCCeEEEEeCCeecC-CCCcccccccH--HHHHH----hCCCcEEEEEEeCCC
Q 028090 111 CLKRCMELIKKGASVCFFPEGTRSK-DGKLGAFKKGA--FSVAA----KTGVPVVPITLVGTG 166 (214)
Q Consensus 111 ~~~~~~~~l~~g~~~~ifPeG~~~~-~~~~~~~~~g~--~~la~----~~~~~ivpv~i~~~~ 166 (214)
.++..++.|+++.+.++--.+--+- .|++..+.+++ +.+|+ +.++|||||+...+.
T Consensus 70 ~~e~~iekLkdp~S~vVvgGQQAGLltGPlYTihKi~siilLAreqede~~vpVVpVfWvAge 132 (537)
T COG4365 70 GVEALIEKLKDPESRVVVGGQQAGLLTGPLYTIHKIASIILLAREQEDELDVPVVPVFWVAGE 132 (537)
T ss_pred HHHHHHHHhcCCCceEEecccccccccCchHHHHHHHHHHHhhHhhhhhhCCCeeEEEEeccC
Confidence 4678889999998866655544554 56666776554 44555 348999999987554
No 74
>PF13728 TraF: F plasmid transfer operon protein
Probab=48.71 E-value=45 Score=25.54 Aligned_cols=52 Identities=17% Similarity=0.212 Sum_probs=39.8
Q ss_pred HHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCC
Q 028090 112 LKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTG 166 (214)
Q Consensus 112 ~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~ 166 (214)
.++.++.+.++.-++.|=+|+|..- ..+.+-+-.++.++|..|+||.+.|..
T Consensus 111 ~~~~l~~la~~~gL~~F~~~~C~~C---~~~~pil~~~~~~yg~~v~~vs~DG~~ 162 (215)
T PF13728_consen 111 RDKALKQLAQKYGLFFFYRSDCPYC---QQQAPILQQFADKYGFSVIPVSLDGRP 162 (215)
T ss_pred HHHHHHHHhhCeEEEEEEcCCCchh---HHHHHHHHHHHHHhCCEEEEEecCCCC
Confidence 3566677777778999999987542 345666777899999999999997653
No 75
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=46.58 E-value=28 Score=27.47 Aligned_cols=50 Identities=16% Similarity=0.111 Sum_probs=28.5
Q ss_pred HHHHHHHhCCCeEEEEeCCeecCCC-CcccccccHHHHHHhCCCcEEEEEE
Q 028090 113 KRCMELIKKGASVCFFPEGTRSKDG-KLGAFKKGAFSVAAKTGVPVVPITL 162 (214)
Q Consensus 113 ~~~~~~l~~g~~~~ifPeG~~~~~~-~~~~~~~g~~~la~~~~~~ivpv~i 162 (214)
+.+.++.++|-.+++|||...+... ...+...-+..+|++.++.++.-..
T Consensus 30 ~~i~~a~~~ga~lvvfPE~~l~g~~~~~~~~~~~l~~~ak~~~i~ii~G~~ 80 (270)
T cd07571 30 DLTRELADEKPDLVVWPETALPFDLQRDPDALARLARAARAVGAPLLTGAP 80 (270)
T ss_pred HHHhhcccCCCCEEEecCCcCCcccccCHHHHHHHHHHHHhcCCeEEEeee
Confidence 3344444557789999998764321 1122334455567777777665443
No 76
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=44.04 E-value=45 Score=30.15 Aligned_cols=76 Identities=14% Similarity=0.108 Sum_probs=46.2
Q ss_pred eeeecccccccchHHHHHH-hcCcEEeecCCchhHHHHHHHHHHHHh-CCCe---EEEEeCCeecCCCCcccc-----cc
Q 028090 75 KFISKTGIFLFPVIGWAMS-MMGVIPLKRMDSRSQLECLKRCMELIK-KGAS---VCFFPEGTRSKDGKLGAF-----KK 144 (214)
Q Consensus 75 ~~~~~~~~~~~p~~~~~~~-~~g~~~v~r~~~~~~~~~~~~~~~~l~-~g~~---~~ifPeG~~~~~~~~~~~-----~~ 144 (214)
+-++.++.+..|-+..+++ .+=.|-|+|....+--+...++.+.+. +|++ +.+.|||...-.+-+.|. .+
T Consensus 58 ChVM~~ESf~d~eiA~~lN~~FV~IKVDREERPDvD~~Ym~~~q~~tG~GGWPLtVfLTPd~kPFfagTY~P~e~r~g~p 137 (667)
T COG1331 58 CHVMAHESFEDPEIAAILNENFVPVKVDREERPDVDSLYMNASQAITGQGGWPLTVFLTPDGKPFFAGTYFPKEDRYGRP 137 (667)
T ss_pred hHHHhhhcCCCHHHHHHHHhCceeeeEChhhccCHHHHHHHHHHHhccCCCCceeEEECCCCceeeeeeecCCcccCCCc
Confidence 4566777888887777665 444666778655444444455555554 5665 889999875443333333 35
Q ss_pred cHHHHH
Q 028090 145 GAFSVA 150 (214)
Q Consensus 145 g~~~la 150 (214)
|+.++.
T Consensus 138 Gf~~lL 143 (667)
T COG1331 138 GFKQLL 143 (667)
T ss_pred CHHHHH
Confidence 555553
No 77
>cd07197 nitrilase Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes. This superfamily (also known as the C-N hydrolase superfamily) contains hydrolases that break carbon-nitrogen bonds; it includes nitrilases, cyanide dihydratases, aliphatic amidases, N-terminal amidases, beta-ureidopropionases, biotinidases, pantotheinase, N-carbamyl-D-amino acid amidohydrolases, the glutaminase domain of glutamine-dependent NAD+ synthetase, apolipoprotein N-acyltransferases, and N-carbamoylputrescine amidohydrolases, among others. These enzymes depend on a Glu-Lys-Cys catalytic triad, and work through a thiol acylenzyme intermediate. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. These oligomers include dimers, tetramers, hexamers, octamers, tetradecamers, octadecamers, as well as variable length helical arrangements and homo-oligomeric spirals. These proteins have roles in vitamin and
Probab=43.73 E-value=77 Score=24.25 Aligned_cols=50 Identities=18% Similarity=0.162 Sum_probs=29.8
Q ss_pred HHHHHHHhCCCeEEEEeCCeecCCC-C------------cccccccHHHHHHhCCCcEEEEEE
Q 028090 113 KRCMELIKKGASVCFFPEGTRSKDG-K------------LGAFKKGAFSVAAKTGVPVVPITL 162 (214)
Q Consensus 113 ~~~~~~l~~g~~~~ifPeG~~~~~~-~------------~~~~~~g~~~la~~~~~~ivpv~i 162 (214)
+.+.++.++|..+++|||....... . .......+..+|++.++.|+.-..
T Consensus 22 ~~i~~a~~~g~dlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~ii~G~~ 84 (253)
T cd07197 22 RLIKEAAEQGADLIVLPELFLTGYSFESAKEDLDLAEELDGPTLEALAELAKELGIYIVAGIA 84 (253)
T ss_pred HHHHHHHHCCCCEEEcCCccccCCccccchhhhhhcccCCchHHHHHHHHHHHhCeEEEeeeE
Confidence 4444555577889999997653211 0 112344556677777777665444
No 78
>PRK13703 conjugal pilus assembly protein TraF; Provisional
Probab=42.31 E-value=74 Score=25.05 Aligned_cols=52 Identities=17% Similarity=0.348 Sum_probs=39.4
Q ss_pred HHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCC
Q 028090 112 LKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTG 166 (214)
Q Consensus 112 ~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~ 166 (214)
-.++++.+.+..-++.|=+|+|... ..+.+-+-.++.++|..|+||.+.|..
T Consensus 134 ~~~~i~~la~~~GL~fFy~s~Cp~C---~~~aPil~~fa~~yg~~v~~VS~DG~~ 185 (248)
T PRK13703 134 QRQAIAKLAEHYGLMFFYRGQDPID---GQLAQVINDFRDTYGLSVIPVSVDGVI 185 (248)
T ss_pred HHHHHHHHHhcceEEEEECCCCchh---HHHHHHHHHHHHHhCCeEEEEecCCCC
Confidence 3456677777777888888888654 345566667899999999999998754
No 79
>COG1929 Glycerate kinase [Carbohydrate transport and metabolism]
Probab=40.05 E-value=57 Score=27.15 Aligned_cols=42 Identities=31% Similarity=0.368 Sum_probs=34.5
Q ss_pred CCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEE
Q 028090 121 KGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITL 162 (214)
Q Consensus 121 ~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i 162 (214)
++..++|+=||........-+-.-|++++|++.++|++-+.=
T Consensus 283 ~daDLVITGEGr~D~Qs~~GK~pigVA~~Akk~~vPvIaiaG 324 (378)
T COG1929 283 KDADLVITGEGRIDSQSLHGKTPIGVAKLAKKYGVPVIAIAG 324 (378)
T ss_pred ccCCEEEeCCCcccccccCCccchHHHHhhhhhCCCEEEEec
Confidence 456799999999877666666778999999999999886654
No 80
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=39.83 E-value=1.6e+02 Score=22.15 Aligned_cols=51 Identities=20% Similarity=0.210 Sum_probs=35.9
Q ss_pred HHHHHHHHHHh-----CCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEE
Q 028090 110 ECLKRCMELIK-----KGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITL 162 (214)
Q Consensus 110 ~~~~~~~~~l~-----~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i 162 (214)
+++..+.+.++ +.+.++++-+|..+.++ +.| ....+.+|.+.|++|..+.+
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~-i~P-~~aAa~lA~~~gV~iytIgi 150 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYG-IQP-KKLADALAREPNVNAFVIFI 150 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCC-CCh-HHHHHHHHHhCCCEEEEEEe
Confidence 67777777776 33467888888765543 222 22246788999999999999
No 81
>COG1623 Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only]
Probab=39.29 E-value=69 Score=25.87 Aligned_cols=92 Identities=23% Similarity=0.259 Sum_probs=54.8
Q ss_pred HHHHHHhcCcEEeecCCchhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCCc
Q 028090 88 IGWAMSMMGVIPLKRMDSRSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTGK 167 (214)
Q Consensus 88 ~~~~~~~~g~~~v~r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~ 167 (214)
+..+.++-|++-.+-+.. +.+.+ .+-+-|+-+.+.++. ..=...+-+.|+++|.+||.+.-.
T Consensus 67 lyEL~KMDGAIILs~D~~-----------kI~yA--NvqL~PD~sipT~Et-GtRHRTAER~AkqTG~~VIaiS~r---- 128 (349)
T COG1623 67 LYELAKMDGAIILSDDGS-----------KILYA--NVQLVPDPSIPTDET-GTRHRTAERVAKQTGNPVIAISER---- 128 (349)
T ss_pred HHHHHhcCCcEEEcCccc-----------eeeee--eeeecCCCCCCCCCC-ccccchHHHHHHHhCCeEEEEecc----
Confidence 566777888877654221 12222 234556655443211 111446778999999999877652
Q ss_pred cCcCCCCCCccceeEEEEEcCCC-CCCChHHHHHHHHHHHHH
Q 028090 168 IMPSGMEGMLNEGTIKVVIHKPI-QGHDAGELCNEARNSIAD 208 (214)
Q Consensus 168 ~~~~~~~~~~~~~~~~v~~g~pi-~~~~~~~~~~~~~~~i~~ 208 (214)
++.++++.+.-= ...+...+..+++++|++
T Consensus 129 -----------rNvITlY~~~~ky~L~d~~~il~ranQAi~T 159 (349)
T COG1623 129 -----------RNVITLYVGNLKYVLKDSAFILSRANQAIQT 159 (349)
T ss_pred -----------cceEEEEecCeeeeecChHHHHHHHHHHHHH
Confidence 356777776422 246777777777777764
No 82
>TIGR02739 TraF type-F conjugative transfer system pilin assembly protein TraF. This protein is part of a large group of proteins involved in conjugative transfer of plasmid DNA, specifically the F-type system. This protein has been predicted to contain a thioredoxin fold and has been shown to be localized to the periplasm. Unlike the related protein TrbB (TIGR02738), TraF does not contain a conserved pair of cysteines and has been shown not to function as a thiol disulfide isomerase by complementation of an Ecoli DsbA defect. The protein is believed to be involved in pilin assembly. Even more closely related than TrbB is a clade of genes (TIGR02740) which do contain the CXXC motif, but it is unclear whether these genes are involved in type-F conjugation systems per se.
Probab=38.99 E-value=81 Score=24.95 Aligned_cols=52 Identities=19% Similarity=0.346 Sum_probs=39.1
Q ss_pred HHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCC
Q 028090 112 LKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTG 166 (214)
Q Consensus 112 ~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~ 166 (214)
-++.++.+.+..-++.|=+|+|... ..+.+-+-.++.++|..|+||.+.|..
T Consensus 141 ~~~~i~~la~~~gL~fFy~~~C~~C---~~~apil~~fa~~ygi~v~~VS~DG~~ 192 (256)
T TIGR02739 141 KEKAIQQLSQSYGLFFFYRGKSPIS---QKMAPVIQAFAKEYGISVIPISVDGTL 192 (256)
T ss_pred HHHHHHHHHhceeEEEEECCCCchh---HHHHHHHHHHHHHhCCeEEEEecCCCC
Confidence 3566677777777888888888653 344555667899999999999998764
No 83
>PF07293 DUF1450: Protein of unknown function (DUF1450); InterPro: IPR009910 This entry consists of several hypothetical bacterial proteins of around 80 residues in length representing two families. Members contain four highly conserved cysteine residues and their function is unknown.
Probab=38.51 E-value=24 Score=22.33 Aligned_cols=27 Identities=19% Similarity=0.290 Sum_probs=22.2
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHH
Q 028090 182 IKVVIHKPIQGHDAGELCNEARNSIAD 208 (214)
Q Consensus 182 ~~v~~g~pi~~~~~~~~~~~~~~~i~~ 208 (214)
+.+.=|+.+..++.+++.+++.+.|++
T Consensus 48 FAlVnG~~V~A~t~eeL~~kI~~~i~e 74 (78)
T PF07293_consen 48 FALVNGEIVAAETAEELLEKIKEKIEE 74 (78)
T ss_pred cEEECCEEEecCCHHHHHHHHHHHHhc
Confidence 444448888999999999999999875
No 84
>PRK10342 glycerate kinase I; Provisional
Probab=34.93 E-value=84 Score=26.49 Aligned_cols=41 Identities=24% Similarity=0.301 Sum_probs=33.6
Q ss_pred CCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEE
Q 028090 121 KGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPIT 161 (214)
Q Consensus 121 ~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~ 161 (214)
++-.++|.=||.....+..-+...|++++|++.++|++-+.
T Consensus 283 ~~ADLVITGEG~~D~QTl~GK~p~gVa~~A~~~~vPviai~ 323 (381)
T PRK10342 283 HDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIA 323 (381)
T ss_pred ccCCEEEECCCcCcccccCCccHHHHHHHHHHhCCCEEEEe
Confidence 34669999999988766666778899999999999988754
No 85
>PRK13669 hypothetical protein; Provisional
Probab=34.51 E-value=57 Score=20.66 Aligned_cols=29 Identities=17% Similarity=0.339 Sum_probs=24.6
Q ss_pred eeEEEEEcCCCCCCChHHHHHHHHHHHHH
Q 028090 180 GTIKVVIHKPIQGHDAGELCNEARNSIAD 208 (214)
Q Consensus 180 ~~~~v~~g~pi~~~~~~~~~~~~~~~i~~ 208 (214)
+.+.+.=|+++..++.+++.+++.+.|++
T Consensus 46 ~~FAlVng~~V~a~t~eeL~~kI~~~i~e 74 (78)
T PRK13669 46 GLFALVNGEVVEGETPEELVENIYAHLEE 74 (78)
T ss_pred CceEEECCeEeecCCHHHHHHHHHHHHhh
Confidence 45666668999999999999999999886
No 86
>cd07581 nitrilase_3 Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=33.08 E-value=78 Score=24.42 Aligned_cols=48 Identities=31% Similarity=0.413 Sum_probs=27.9
Q ss_pred HHHHHHHhCCCeEEEEeCCeecCCC-Cc-----------ccccccHHHHHHhCCCcEEEE
Q 028090 113 KRCMELIKKGASVCFFPEGTRSKDG-KL-----------GAFKKGAFSVAAKTGVPVVPI 160 (214)
Q Consensus 113 ~~~~~~l~~g~~~~ifPeG~~~~~~-~~-----------~~~~~g~~~la~~~~~~ivpv 160 (214)
+.+.++.++|-.+++|||....... .. .++..-+..+|++.++.++.-
T Consensus 21 ~~i~~a~~~g~dlivfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~iv~G 80 (255)
T cd07581 21 RLLAEAAAAGADLVVFPEYTMARFGDGLDDYARVAEPLDGPFVSALARLARELGITVVAG 80 (255)
T ss_pred HHHHHHHHcCCCEEECcchhcCCCCcchhhHHhhhccCCCHHHHHHHHHHHHcCeEEEEE
Confidence 3444455678889999998754211 11 122333556777777776643
No 87
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=32.59 E-value=69 Score=18.60 Aligned_cols=31 Identities=13% Similarity=0.208 Sum_probs=24.0
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhcc
Q 028090 182 IKVVIHKPIQGHDAGELCNEARNSIADALGL 212 (214)
Q Consensus 182 ~~v~~g~pi~~~~~~~~~~~~~~~i~~~l~~ 212 (214)
++|...+.-+.+..+++.+++.+.+.+.+..
T Consensus 4 i~I~~~~grs~eqk~~l~~~it~~l~~~~~~ 34 (62)
T PRK00745 4 FHIELFEGRTVEQKRKLVEEITRVTVETLGC 34 (62)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 5677666667778889999999988887664
No 88
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=31.84 E-value=80 Score=17.91 Aligned_cols=31 Identities=16% Similarity=0.336 Sum_probs=22.8
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhcc
Q 028090 182 IKVVIHKPIQGHDAGELCNEARNSIADALGL 212 (214)
Q Consensus 182 ~~v~~g~pi~~~~~~~~~~~~~~~i~~~l~~ 212 (214)
++|...+.-+.+...++.+++.+.+.+.+..
T Consensus 3 i~i~~~~grt~eqk~~l~~~i~~~l~~~~g~ 33 (58)
T cd00491 3 VQIYILEGRTDEQKRELIERVTEAVSEILGA 33 (58)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 5666666556777888888888888877643
No 89
>TIGR00045 glycerate kinase. The only characterized member of this family so far is the glycerate kinase GlxK (EC 2.7.1.31) of E. coli. This enzyme acts after glyoxylate carboligase and 2-hydroxy-3-oxopropionate reductase (tartronate semialdehyde reductase) in the conversion of glyoxylate to 3-phosphoglycerate (the D-glycerate pathway) as a part of allantoin degradation.
Probab=31.69 E-value=90 Score=26.24 Aligned_cols=40 Identities=33% Similarity=0.451 Sum_probs=32.3
Q ss_pred CCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEE
Q 028090 121 KGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPI 160 (214)
Q Consensus 121 ~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv 160 (214)
++-.++|.=||........-+.-.|++++|++.++|++-+
T Consensus 282 ~~ADlVITGEG~~D~Qtl~GK~p~~Va~~A~~~~vPviai 321 (375)
T TIGR00045 282 KDADLVITGEGRLDRQSLMGKAPVGVAKRAKKYGVPVIAI 321 (375)
T ss_pred cCCCEEEECCCcccccccCCchHHHHHHHHHHhCCeEEEE
Confidence 3456999999998776656667789999999999998664
No 90
>PRK09932 glycerate kinase II; Provisional
Probab=31.56 E-value=97 Score=26.12 Aligned_cols=40 Identities=33% Similarity=0.382 Sum_probs=32.1
Q ss_pred CCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEE
Q 028090 122 GASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPIT 161 (214)
Q Consensus 122 g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~ 161 (214)
+-.++|.=||........-+...|++++|++.++|++-+.
T Consensus 284 ~ADlVITGEG~~D~Qt~~GK~p~~Va~~A~~~~~Pvi~i~ 323 (381)
T PRK09932 284 GAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIA 323 (381)
T ss_pred cCCEEEECCCcccccccCCccHHHHHHHHHHcCCCEEEEe
Confidence 3569999999987765556667899999999999987653
No 91
>cd07585 nitrilase_7 Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=30.04 E-value=1.2e+02 Score=23.42 Aligned_cols=48 Identities=19% Similarity=0.304 Sum_probs=27.8
Q ss_pred HHHHHhCCCeEEEEeCCeecC-CC-C-c--------ccccccHHHHHHhCCCcEEEEEE
Q 028090 115 CMELIKKGASVCFFPEGTRSK-DG-K-L--------GAFKKGAFSVAAKTGVPVVPITL 162 (214)
Q Consensus 115 ~~~~l~~g~~~~ifPeG~~~~-~~-~-~--------~~~~~g~~~la~~~~~~ivpv~i 162 (214)
+.++.++|-.+++|||....- .. . . .+....+..+|++.++.|+.-..
T Consensus 25 i~~a~~~gadliv~PE~~l~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~i~~G~~ 83 (261)
T cd07585 25 TRKAAAQGAELVCFPEMCITGYTHVRALSREAEVPDGPSTQALSDLARRYGLTILAGLI 83 (261)
T ss_pred HHHHHHcCCCEEEecccccccccCCcccchhcccCCChHHHHHHHHHHHcCcEEEEecc
Confidence 334555778899999976532 11 0 0 11233456678888877764433
No 92
>PRK13305 sgbH 3-keto-L-gulonate-6-phosphate decarboxylase; Provisional
Probab=30.03 E-value=99 Score=23.77 Aligned_cols=30 Identities=7% Similarity=0.223 Sum_probs=24.5
Q ss_pred EEEEEcCCCC-CCChHHHHHHHHHHHHHHhc
Q 028090 182 IKVVIHKPIQ-GHDAGELCNEARNSIADALG 211 (214)
Q Consensus 182 ~~v~~g~pi~-~~~~~~~~~~~~~~i~~~l~ 211 (214)
-.+.+|.||+ .+|+.+.++++.+.|.+.+.
T Consensus 186 d~iVVGR~It~A~dP~~aa~~i~~~i~~~~~ 216 (218)
T PRK13305 186 KAFIAGRALAGAANPAQVAADFHAQIDAIWG 216 (218)
T ss_pred CEEEECCcccCCCCHHHHHHHHHHHHHHhhc
Confidence 3568899999 57999999999999977653
No 93
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=28.32 E-value=2.5e+02 Score=22.03 Aligned_cols=70 Identities=24% Similarity=0.292 Sum_probs=45.0
Q ss_pred ccchHHHHHHhcCcEEeec--CCchhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEE
Q 028090 84 LFPVIGWAMSMMGVIPLKR--MDSRSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPIT 161 (214)
Q Consensus 84 ~~p~~~~~~~~~g~~~v~r--~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~ 161 (214)
..+.++.+.+.+|...+.- ....-..+.+.++.+.+++.+.-+||.|-..+. +.+-.+|+++|++++.+.
T Consensus 176 ~H~af~Y~~~~ygl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~--------~~~~~la~~~g~~v~~ld 247 (266)
T cd01018 176 YHPAWGYFARDYGLTQIPIEEEGKEPSPADLKRLIDLAKEKGVRVVFVQPQFST--------KSAEAIAREIGAKVVTID 247 (266)
T ss_pred ECchhHHHHHHcCCEEEecCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCc--------HHHHHHHHHcCCeEEEeC
Confidence 3456788889888775532 122223456788888888776667777643322 234468889999886653
No 94
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=27.49 E-value=1e+02 Score=17.86 Aligned_cols=31 Identities=16% Similarity=0.318 Sum_probs=23.3
Q ss_pred EEEEEc-CCCCCCChHHHHHHHHHHHHHHhcc
Q 028090 182 IKVVIH-KPIQGHDAGELCNEARNSIADALGL 212 (214)
Q Consensus 182 ~~v~~g-~pi~~~~~~~~~~~~~~~i~~~l~~ 212 (214)
++|.+. +.-+.+...++.+++.+.+.+.+..
T Consensus 3 i~i~i~~~grt~eqK~~l~~~it~~l~~~lg~ 34 (63)
T TIGR00013 3 VNIYILKEGRTDEQKRQLIEGVTEAMAETLGA 34 (63)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 456666 5566778889999999998887754
No 95
>cd07583 nitrilase_5 Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=26.41 E-value=1.4e+02 Score=22.94 Aligned_cols=48 Identities=23% Similarity=0.097 Sum_probs=28.3
Q ss_pred HHHHHHHhCCCeEEEEeCCeecCC-C---------CcccccccHHHHHHhCCCcEEEE
Q 028090 113 KRCMELIKKGASVCFFPEGTRSKD-G---------KLGAFKKGAFSVAAKTGVPVVPI 160 (214)
Q Consensus 113 ~~~~~~l~~g~~~~ifPeG~~~~~-~---------~~~~~~~g~~~la~~~~~~ivpv 160 (214)
+.+.++.++|-.+++|||...... . ...+....+..+|++.++.++.-
T Consensus 23 ~~i~~A~~~g~dlvv~PE~~l~g~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G 80 (253)
T cd07583 23 SLIEEAAAAGADLIVLPEMWNTGYFLDDLYELADEDGGETVSFLSELAKKHGVNIVAG 80 (253)
T ss_pred HHHHHHHHCCCCEEEcCCccCCCCChhhHHhhhcccCchHHHHHHHHHHHcCcEEEec
Confidence 333445556888999999754221 0 11223445667788888777743
No 96
>cd07584 nitrilase_6 Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=25.78 E-value=1.4e+02 Score=23.01 Aligned_cols=49 Identities=24% Similarity=0.232 Sum_probs=27.2
Q ss_pred HHHHHHHhCCCeEEEEeCCeecC-CCC-------------cccccccHHHHHHhCCCcEEEEE
Q 028090 113 KRCMELIKKGASVCFFPEGTRSK-DGK-------------LGAFKKGAFSVAAKTGVPVVPIT 161 (214)
Q Consensus 113 ~~~~~~l~~g~~~~ifPeG~~~~-~~~-------------~~~~~~g~~~la~~~~~~ivpv~ 161 (214)
+.+.++.++|..+++|||....- ... ..+...-+..+|++.++.|+.-.
T Consensus 23 ~~i~~a~~~ga~liv~PE~~l~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~G~ 85 (258)
T cd07584 23 ELCKEAAAEGADLICFPELATTGYRPDLLGPKLWELSEPIDGPTVRLFSELAKELGVYIVCGF 85 (258)
T ss_pred HHHHHHHHcCCCEEEcccccccCCCccccchhhHhhccCCCCcHHHHHHHHHHHcCeEEEEee
Confidence 33444555778899999976432 110 00122335567777776665443
No 97
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=24.73 E-value=2.6e+02 Score=22.15 Aligned_cols=70 Identities=20% Similarity=0.249 Sum_probs=45.8
Q ss_pred ccchHHHHHHhcCcEEeec----CCchhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEE
Q 028090 84 LFPVIGWAMSMMGVIPLKR----MDSRSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVP 159 (214)
Q Consensus 84 ~~p~~~~~~~~~g~~~v~r----~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivp 159 (214)
..+-++++.+.+|...+.- ....-..+.+.++.+.+++++.-+||.|-..+. +.+-.+|++++++++.
T Consensus 177 ~H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~--------~~~~~la~~~g~~v~~ 248 (282)
T cd01017 177 QHAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASS--------KIAETLAKETGAKLLV 248 (282)
T ss_pred ecccHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh--------HHHHHHHHHcCCcEEE
Confidence 4567788889999776531 112223456788888888877767777754432 2344588889998865
Q ss_pred EE
Q 028090 160 IT 161 (214)
Q Consensus 160 v~ 161 (214)
+.
T Consensus 249 ld 250 (282)
T cd01017 249 LN 250 (282)
T ss_pred ec
Confidence 43
No 98
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.04 E-value=2.5e+02 Score=22.44 Aligned_cols=71 Identities=20% Similarity=0.208 Sum_probs=46.1
Q ss_pred ccchHHHHHHhcCcEEee--c--CCchhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEE
Q 028090 84 LFPVIGWAMSMMGVIPLK--R--MDSRSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVP 159 (214)
Q Consensus 84 ~~p~~~~~~~~~g~~~v~--r--~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivp 159 (214)
..+.++++++.+|...+. . ....-..+-+.++.+.+++.+.=+||.|...+. +.+-.+++++++++++
T Consensus 185 ~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~--------~~~~~ia~~~g~~v~~ 256 (286)
T cd01019 185 FHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHP--------KIAETLAEGTGAKVGE 256 (286)
T ss_pred ecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCCh--------HHHHHHHHhcCceEEE
Confidence 455688889988876553 1 112223456788888888877667777754332 3566788888987765
Q ss_pred EEE
Q 028090 160 ITL 162 (214)
Q Consensus 160 v~i 162 (214)
+-.
T Consensus 257 l~~ 259 (286)
T cd01019 257 LDP 259 (286)
T ss_pred ecc
Confidence 543
No 99
>PRK13482 DNA integrity scanning protein DisA; Provisional
Probab=23.81 E-value=3.4e+02 Score=22.71 Aligned_cols=52 Identities=23% Similarity=0.307 Sum_probs=38.6
Q ss_pred cccHHHHHHhCCCcEEEEEEeCCCccCcCCCCCCccceeEEEEEcCCCC-CCChHHHHHHHHHHHHHH
Q 028090 143 KKGAFSVAAKTGVPVVPITLVGTGKIMPSGMEGMLNEGTIKVVIHKPIQ-GHDAGELCNEARNSIADA 209 (214)
Q Consensus 143 ~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~~~~~~~~~~~v~~g~pi~-~~~~~~~~~~~~~~i~~~ 209 (214)
......+|.+++++++.|.=+ .+.+++..+.-.. ..|..++..+.+++++++
T Consensus 102 HRaA~gise~Tda~vIvVSee---------------~g~Isl~~~g~~~~~~d~~~l~~~anQal~Tl 154 (352)
T PRK13482 102 HRTAERVAKQTGVPVIAVSQR---------------RNIITLYVGGLRYVLEDIGVILSRANQALQTL 154 (352)
T ss_pred HHHhhHHHHhcCCEEEEEecc---------------cCeEEEEECCEEEecCCHHHHHHHHHHHHHHH
Confidence 456678889999888877653 4678888876554 578888888888887653
No 100
>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A ....
Probab=23.53 E-value=89 Score=23.28 Aligned_cols=30 Identities=20% Similarity=0.439 Sum_probs=20.6
Q ss_pred hhHHHHHHHHH-HHHhCCCeEEEEeCCeecC
Q 028090 106 RSQLECLKRCM-ELIKKGASVCFFPEGTRSK 135 (214)
Q Consensus 106 ~~~~~~~~~~~-~~l~~g~~~~ifPeG~~~~ 135 (214)
.+...+++++. .....++.++.||.|+.--
T Consensus 15 tDdt~Aiq~Ai~~~~~~~g~~v~~P~G~Y~i 45 (225)
T PF12708_consen 15 TDDTAAIQAAIDAAAAAGGGVVYFPPGTYRI 45 (225)
T ss_dssp EE-HHHHHHHHHHHCSTTSEEEEE-SEEEEE
T ss_pred hhHHHHHHHhhhhcccCCCeEEEEcCcEEEE
Confidence 34556778777 5556778899999999643
No 101
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=23.48 E-value=1.4e+02 Score=17.32 Aligned_cols=31 Identities=6% Similarity=0.155 Sum_probs=23.1
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhcc
Q 028090 182 IKVVIHKPIQGHDAGELCNEARNSIADALGL 212 (214)
Q Consensus 182 ~~v~~g~pi~~~~~~~~~~~~~~~i~~~l~~ 212 (214)
+++.+.+--+.|...++.+++.+.+.+.+..
T Consensus 4 i~i~~~~Grs~EqK~~L~~~it~a~~~~~~~ 34 (60)
T PRK02289 4 VRIDLFEGRSQEQKNALAREVTEVVSRIAKA 34 (60)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 4555555446778889999999999887765
No 102
>cd07573 CPA N-carbamoylputrescine amidohydrolase (CPA) (class 11 nitrilases). CPA (EC 3.5.1.53, also known as N-carbamoylputrescine amidase and carbamoylputrescine hydrolase) converts N-carbamoylputrescine to putrescine, a step in polyamine biosynthesis in plants and bacteria. This subgroup includes Arabidopsis thaliana CPA, also known as nitrilase-like 1 (NLP1), and Pseudomonas aeruginosa AguB. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 11. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer; P. aeruginosa AugB is a homohexamer, Arabidopsis thaliana NLP1 is a homooctomer.
Probab=23.03 E-value=1.6e+02 Score=23.07 Aligned_cols=20 Identities=20% Similarity=0.160 Sum_probs=13.8
Q ss_pred HHHHHHhCCCeEEEEeCCee
Q 028090 114 RCMELIKKGASVCFFPEGTR 133 (214)
Q Consensus 114 ~~~~~l~~g~~~~ifPeG~~ 133 (214)
.+.++.+.|-.+++|||-..
T Consensus 24 ~i~~A~~~gadlivfPE~~l 43 (284)
T cd07573 24 LVREAAAQGAQIVCLQELFE 43 (284)
T ss_pred HHHHHHHCCCcEEEcccccc
Confidence 33344457788999999643
No 103
>cd07572 nit Nit1, Nit 2, and related proteins, and the Nit1-like domain of NitFhit (class 10 nitrilases). This subgroup includes mammalian Nit1 and Nit2, the Nit1-like domain of the invertebrate NitFhit, and various uncharacterized bacterial and archaeal Nit-like proteins. Nit1 and Nit2 are candidate tumor suppressor proteins. In NitFhit, the Nit1-like domain is encoded as a fusion protein with the non-homologous tumor suppressor, fragile histidine triad (Fhit). Mammalian Nit1 and Fhit may affect distinct signal pathways, and both may participate in DNA damage-induced apoptosis. Nit1 is a negative regulator in T cells. Overexpression of Nit2 in HeLa cells leads to a suppression of cell growth through cell cycle arrest in G2. These Nit proteins and the Nit1-like domain of NitFhit belong to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in t
Probab=22.87 E-value=2.4e+02 Score=21.78 Aligned_cols=48 Identities=21% Similarity=0.196 Sum_probs=27.0
Q ss_pred HHHHHHHhCCCeEEEEeCCeecCCC--C----------cccccccHHHHHHhCCCcEEEE
Q 028090 113 KRCMELIKKGASVCFFPEGTRSKDG--K----------LGAFKKGAFSVAAKTGVPVVPI 160 (214)
Q Consensus 113 ~~~~~~l~~g~~~~ifPeG~~~~~~--~----------~~~~~~g~~~la~~~~~~ivpv 160 (214)
+.+.++.++|..+++|||-...... . ..+...-+..+|++.++.|+.-
T Consensus 22 ~~i~~A~~~g~dlivfPE~~l~g~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~i~~G 81 (265)
T cd07572 22 ELIEEAAAQGAKLVVLPECFNYPGGTDAFKLALAEEEGDGPTLQALSELAKEHGIWLVGG 81 (265)
T ss_pred HHHHHHHHCCCCEEECCccccCcCcchhhhhhhhccccCChHHHHHHHHHHHCCeEEEEe
Confidence 3344455678889999997543211 0 0112334456677777766643
No 104
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=22.54 E-value=4e+02 Score=22.75 Aligned_cols=46 Identities=15% Similarity=0.290 Sum_probs=33.9
Q ss_pred HHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCc--EEEEEEe
Q 028090 112 LKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVP--VVPITLV 163 (214)
Q Consensus 112 ~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~--ivpv~i~ 163 (214)
.+++..+|..|..+++-|.+..... .-+.+++|.++|.| ++-|...
T Consensus 177 tRK~gAALAaGCTvVvkPs~~TPls------aLala~lA~~AGiP~Gv~NVit~ 224 (503)
T KOG2451|consen 177 TRKAGAALAAGCTVVVKPSEDTPLS------ALALAKLAEEAGIPAGVLNVITA 224 (503)
T ss_pred HhHHHHHHhcCceEEEccCCCCchH------HHHHHHHHHHcCCCCcceEEEec
Confidence 3678889999999999997643221 34678899999988 6666553
No 105
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=22.46 E-value=1.4e+02 Score=17.52 Aligned_cols=31 Identities=13% Similarity=0.251 Sum_probs=22.5
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhcc
Q 028090 182 IKVVIHKPIQGHDAGELCNEARNSIADALGL 212 (214)
Q Consensus 182 ~~v~~g~pi~~~~~~~~~~~~~~~i~~~l~~ 212 (214)
++|...+.-+.+..+++.+++.+.+.+.+..
T Consensus 4 v~i~l~~grt~eqk~~l~~~it~~l~~~lg~ 34 (64)
T PRK01964 4 VQIQLLEGRPEEKIKNLIREVTEAISATLDV 34 (64)
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 4566555556677888888888888877654
No 106
>PF02595 Gly_kinase: Glycerate kinase family; InterPro: IPR004381 This family includes glycerate kinase 2 (2.7.1.31 from EC), which catalyses the phosphorylation of (R)-glycerate to 3-phospho-(R)-glycerate in the presence of ATP. These proteins consist of two different alpha/beta domains: domain 1 has a flavodoxin-like fold, while domain 2 has a restriction enzyme-like fold (domain 2 is inserted into domain 1).; GO: 0008887 glycerate kinase activity, 0031388 organic acid phosphorylation; PDB: 3CWC_B 1TO6_A.
Probab=22.06 E-value=70 Score=26.91 Aligned_cols=43 Identities=26% Similarity=0.356 Sum_probs=28.3
Q ss_pred CCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEe
Q 028090 121 KGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLV 163 (214)
Q Consensus 121 ~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~ 163 (214)
++..++|.=||........-+.-.+++++|++.++|++-+.=.
T Consensus 283 ~~aDlVITGEG~~D~Qtl~GK~p~~Va~~A~~~~vPviav~G~ 325 (377)
T PF02595_consen 283 EDADLVITGEGRLDAQTLAGKVPGGVARLAKKHGVPVIAVAGS 325 (377)
T ss_dssp CC-SEEEE--CECSTTTTTTCHHHHHHCCHCCTT--EEEEECE
T ss_pred cCCCEEEECccccccccCCCcHHHHHHHHHHHcCCcEEEEeCC
Confidence 4567999999998775555556677888888889998766554
No 107
>COG3411 Ferredoxin [Energy production and conversion]
Probab=21.94 E-value=86 Score=18.99 Aligned_cols=20 Identities=25% Similarity=0.723 Sum_probs=16.4
Q ss_pred HHHHHhCCCeEEEEeCCeec
Q 028090 115 CMELIKKGASVCFFPEGTRS 134 (214)
Q Consensus 115 ~~~~l~~g~~~~ifPeG~~~ 134 (214)
+...-+.|-.+++||||..-
T Consensus 10 Cl~~C~~gPvl~vYpegvWY 29 (64)
T COG3411 10 CLGVCQDGPVLVVYPEGVWY 29 (64)
T ss_pred hhhhhccCCEEEEecCCeeE
Confidence 66777888899999999643
No 108
>PRK04270 H/ACA RNA-protein complex component Cbf5p; Reviewed
Probab=21.82 E-value=1.4e+02 Score=24.21 Aligned_cols=84 Identities=17% Similarity=0.245 Sum_probs=45.6
Q ss_pred hcCcEEeecCCchhHHHHHHHHHHHHhCCCeEEEEeCCeecCCCCcccccccHHHHHHhCCCcEEEEEEeCCCccCcCCC
Q 028090 94 MMGVIPLKRMDSRSQLECLKRCMELIKKGASVCFFPEGTRSKDGKLGAFKKGAFSVAAKTGVPVVPITLVGTGKIMPSGM 173 (214)
Q Consensus 94 ~~g~~~v~r~~~~~~~~~~~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~g~~~la~~~~~~ivpv~i~~~~~~~~~~~ 173 (214)
..|.+.+++..+-...+.+..+.+.++.. ..+..+.+-|+..| ++|+.+-.+-+....-.
T Consensus 21 ~~g~l~i~Kp~g~tS~~~v~~~r~~~~~k---------kvGH~GTLDp~A~G-----------vL~v~~g~atk~~~~~~ 80 (300)
T PRK04270 21 KFGVVNLDKPPGPTSHEVAAWVRDILGVE---------KAGHGGTLDPKVTG-----------VLPVALGKATKVVQALL 80 (300)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhccc---------cccCCCCCCCcCeE-----------EEEEEEChHhhhhHHhc
Confidence 45788889888777888888888877643 23334445555555 46666622211111100
Q ss_pred CCCccceeEEEEEcCCCCCCChHHH
Q 028090 174 EGMLNEGTIKVVIHKPIQGHDAGEL 198 (214)
Q Consensus 174 ~~~~~~~~~~v~~g~pi~~~~~~~~ 198 (214)
...+.=..++.+|.+++.++.++.
T Consensus 81 -~~~K~Y~~~~~~g~~~~~~~~~~~ 104 (300)
T PRK04270 81 -ESGKEYVCVMHLHGDVPEEDIRKV 104 (300)
T ss_pred -cCCcEEEEEEEECCCCCHHHHHHH
Confidence 001111456888887655433333
No 109
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=21.36 E-value=1.5e+02 Score=17.02 Aligned_cols=31 Identities=6% Similarity=0.193 Sum_probs=22.6
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhcc
Q 028090 182 IKVVIHKPIQGHDAGELCNEARNSIADALGL 212 (214)
Q Consensus 182 ~~v~~g~pi~~~~~~~~~~~~~~~i~~~l~~ 212 (214)
++|...+--+.+...++.+++.+.+.+.+..
T Consensus 4 i~i~~~~Grs~eqk~~l~~~it~~l~~~~~~ 34 (61)
T PRK02220 4 VHIKLIEGRTEEQLKALVKDVTAAVSKNTGA 34 (61)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 4556555556777888888888888877654
No 110
>PRK02079 pyrroloquinoline quinone biosynthesis protein PqqD; Provisional
Probab=20.45 E-value=71 Score=20.67 Aligned_cols=16 Identities=25% Similarity=0.546 Sum_probs=12.9
Q ss_pred CCCeEEEEeCCeecCC
Q 028090 121 KGASVCFFPEGTRSKD 136 (214)
Q Consensus 121 ~g~~~~ifPeG~~~~~ 136 (214)
++.+++++|||...-+
T Consensus 20 ~~~~vlL~PEgmi~Ln 35 (88)
T PRK02079 20 QNCHVLLYPEGMIKLN 35 (88)
T ss_pred cCceEEEcCCeeeeec
Confidence 5678999999987654
Done!