BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028093
(214 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RX71|BAG4_ARATH BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana
GN=BAG4 PE=1 SV=1
Length = 269
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 151/214 (70%), Gaps = 15/214 (7%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEELTNK--EKKP 60
GD+KKA+ +KTGL+ E K+LFRG E++D E L +G+KD SK++++ E TNK E++P
Sbjct: 69 FGDVKKALVQKTGLEASELKILFRGVERDDAEQLQAAGVKDASKLVVVVEDTNKRVEQQP 128
Query: 61 KEVKDSPEKKHEYAKDSEEMRKALQAIAGVRAEVDKLSERVASLEVAVNGGTKVPSEELD 120
V ++EM KA+ A+ V EVDKLS+RV +LEVAVNGGT+V E D
Sbjct: 129 PVV-------------TKEMEKAIAAVNAVTGEVDKLSDRVVALEVAVNGGTQVAVREFD 175
Query: 121 TSAELLMKELLKLDGIEAEGEAKVQRKTEVRRVQKFHETLDNLKAINSNPFCDSSNAIKV 180
+AELLM++LLKLDGIEAEG+AKVQRK EVRR+Q E +D LKA SNPF D S A V
Sbjct: 176 MAAELLMRQLLKLDGIEAEGDAKVQRKAEVRRIQNLQEAVDKLKARCSNPFVDQSKAAAV 235
Query: 181 VTQWETFDSGMGSLNPPPLAPSSTTINQDWERFD 214
T+WE+F +G+GSLNPPP A S + QDWE+FD
Sbjct: 236 STEWESFGNGVGSLNPPPPASPSANVTQDWEKFD 269
>sp|Q0WUQ1|BAG1_ARATH BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana
GN=BAG1 PE=1 SV=1
Length = 342
Score = 124 bits (310), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 110/166 (66%), Gaps = 11/166 (6%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEELTNKEKKPKE 62
G+LKK ++ TG+ Q+QK++++ KE++ LDVSG+KDKSK++L+E+ ++EK+ E
Sbjct: 88 FGELKKMLTGPTGIHHQDQKLMYKDKERDSKAFLDVSGVKDKSKMVLIEDPLSQEKRFLE 147
Query: 63 VKDSPEKKHEYAKDSEEMRKALQAIAGVRAEVDKLSERVASLEVAVNGGTKVPSEELDTS 122
++ + AK KA +AI+ + EVD+L RV++ E+ G K+ ++L T
Sbjct: 148 MR-------KIAKTE----KASKAISDISLEVDRLGGRVSAFEMVTKKGGKIAEKDLVTV 196
Query: 123 AELLMKELLKLDGIEAEGEAKVQRKTEVRRVQKFHETLDNLKAINS 168
ELLM EL+KLD I AEG+ K+QRK +V+RVQ + ETLD LK NS
Sbjct: 197 IELLMNELIKLDAIVAEGDVKLQRKMQVKRVQNYVETLDALKVKNS 242
>sp|Q9LYP4|BAG3_ARATH BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana
GN=BAG3 PE=1 SV=1
Length = 303
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 103/166 (62%), Gaps = 11/166 (6%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEELTNKEKKPKE 62
G+LKK +S++ GL ++ KVL++ KE++ LD+ G+KD+SK+++ KE
Sbjct: 66 FGELKKMLSDQVGLHHEDMKVLYKDKERDSKMFLDLCGVKDRSKLVV-----------KE 114
Query: 63 VKDSPEKKHEYAKDSEEMRKALQAIAGVRAEVDKLSERVASLEVAVNGGTKVPSEELDTS 122
S EK+ + + + KA ++I+ + EVD+L+ +V++ E +N G KV + L
Sbjct: 115 DPISQEKRLLAKRKNAAIEKASKSISDISFEVDRLAGQVSAFETVINKGGKVEEKSLVNL 174
Query: 123 AELLMKELLKLDGIEAEGEAKVQRKTEVRRVQKFHETLDNLKAINS 168
E+LM +LL+LD I A+G+ K+ RK +V+RVQK+ E LD LK NS
Sbjct: 175 IEMLMNQLLRLDAIIADGDVKLMRKMQVQRVQKYVEALDLLKVKNS 220
>sp|Q0WPX7|BAG2_ARATH BAG family molecular chaperone regulator 2 OS=Arabidopsis thaliana
GN=BAG2 PE=2 SV=1
Length = 285
Score = 104 bits (259), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 128/242 (52%), Gaps = 46/242 (19%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEELTNKEKKPKE 62
G+LKK +S TG+ Q+ +++++ KE++ LD+SG+KD+SK++L+E+ ++EK+ E
Sbjct: 60 FGELKKILSGATGVHHQDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRLLE 119
Query: 63 VKDSPEKKHEYAKDSEEMRKALQAIAGVRAEVDKLSERVASLEVAVNGGTKVPSEELDTS 122
++ K+ K+ +AI+ + +V++L+ ++++ + + G KV + L+
Sbjct: 120 LRKIATKE-----------KSSKAISDISFQVERLAGQLSAFDTVIGKGGKVEEKNLENL 168
Query: 123 AELLMKELLKLDGIEAEGEAKVQRKTEVRRVQKFHETLDNLKAINSN------------- 169
E+LM +L+KLD I +G+ K+++K + R+ K+ E LD LK NS
Sbjct: 169 MEMLMNQLVKLDAISGDGDVKLKKKMQEERLHKYVEALDLLKIKNSRQPQTKPKPQYKER 228
Query: 170 ------------PFCDSSN-AIKVVTQWETFDSGMGS---LNPP-PLAPSSTTINQDWER 212
P SS+ + + T+WETFDS S L P P+ P WE
Sbjct: 229 EMLTFYEEASRKPTASSSSPPVIITTRWETFDSSSASTATLQPVRPVHPKF-----KWEL 283
Query: 213 FD 214
F+
Sbjct: 284 FN 285
>sp|Q54L35|NED82_DICDI NEDD8-like protein 2 OS=Dictyostelium discoideum GN=nedd8l2 PE=3
SV=1
Length = 80
Score = 37.7 bits (86), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 6 LKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEE 52
+K +I G++PQEQK++F GK +D L G+KD S + +L E
Sbjct: 27 IKNSIRIMEGINPQEQKLIFDGKVLKDTSTLKSCGIKDGSTISVLFE 73
>sp|Q60739|BAG1_MOUSE BAG family molecular chaperone regulator 1 OS=Mus musculus GN=Bag1
PE=1 SV=3
Length = 355
Score = 37.0 bits (84), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 2 MIGDLKKAISEKTGLDPQEQKVLFRGKE-KEDNEHLDVSGMKDKSKVLLLEELTNKE--- 57
++ DL + + E TG+ QK++F+GK KE L GM++ +V+L+ E +N E
Sbjct: 179 VVQDLAQLVEEATGVPLPFQKLIFKGKSLKEMETPLSALGMQNGCRVMLIGEKSNPEEEV 238
Query: 58 --KKPKEVKDSPEKKHEYAKDSEEMRKALQAIAGVRAEVDKLSERVASLEVAVNGGTKVP 115
KK K+++ S EK A +E+ K L I + +E + L+ V
Sbjct: 239 ELKKLKDLEVSAEK---IANHLQELNKELSGIQQGFLAKELQAEALCKLDRKVKA----- 290
Query: 116 SEELDTSAELLMKELLKLDGI---EAEGEAKVQRKTEVRRVQKFHETLDNL 163
+ E MK L ++D + E +++++RK V++VQ F D +
Sbjct: 291 ------TIEQFMKILEEIDTMVLPEQFKDSRLKRKNLVKKVQVFLAECDTV 335
>sp|Q9JLV1|BAG3_MOUSE BAG family molecular chaperone regulator 3 OS=Mus musculus GN=Bag3
PE=1 SV=2
Length = 577
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 94 VDKLSERVASLEVAVNG--GTKVPSEELDTSAELLMKELLKLDGIEAEGEAKVQ--RKTE 149
V+ + E+V LE AV+ G K + L E L KELL LD ++ EG A V+ R+
Sbjct: 430 VEAILEKVQGLEQAVDSFEGKKTDKKYLMIE-EYLTKELLALDSVDPEGRADVRQARRDG 488
Query: 150 VRRVQKFHETLDNLKAIN 167
VR+VQ E L+ KAI+
Sbjct: 489 VRKVQTILEKLEQ-KAID 505
>sp|B0K019|BAG1_RAT BAG family molecular chaperone regulator 1 OS=Rattus norvegicus
GN=Bag1 PE=2 SV=1
Length = 358
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 19/169 (11%)
Query: 2 MIGDLKKAISEKTGLDPQEQKVLFRGKE-KEDNEHLDVSGMKDKSKVLLLEELTNKEKKP 60
++ DL + + E TG+ QK++F+GK KE L GM++ +V+L+ E +N E++
Sbjct: 182 IVQDLAQLVEEATGVPLPFQKLIFKGKSLKEMETPLSALGMQNGCRVMLIGEKSNPEEEA 241
Query: 61 --KEVKDSPEKKHEYAKDSEEMRKAL----QAIAGVRAEVDKLSERVASLEVAVNGGTKV 114
K++KD + A EE+ K L Q + + L ++ + K+
Sbjct: 242 ELKKLKDLEVSVEKTANHLEELNKELSDIQQGFLAKELQAEALCRLDRKIKATIEQFMKI 301
Query: 115 PSEELDTSAELLMKELLKLDGIEAEGEAKVQRKTEVRRVQKFHETLDNL 163
EE+DT +++ E K +++++RK V++VQ F D +
Sbjct: 302 -LEEIDT---MVLPENFK--------DSRLKRKNLVKKVQVFLAECDTV 338
>sp|O95817|BAG3_HUMAN BAG family molecular chaperone regulator 3 OS=Homo sapiens GN=BAG3
PE=1 SV=3
Length = 575
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 94 VDKLSERVASLEVAVNG--GTKVPSEELDTSAELLMKELLKLDGIEAEGEAKVQ--RKTE 149
V+ + E+V LE AV+ G K + L E L KELL LD ++ EG A V+ R+
Sbjct: 425 VEAILEKVQGLEQAVDNFEGKKTDKKYLMIE-EYLTKELLALDSVDPEGRADVRQARRDG 483
Query: 150 VRRVQKFHETLDNLKAIN 167
VR+VQ E L+ KAI+
Sbjct: 484 VRKVQTILEKLEQ-KAID 500
>sp|P11441|UBL4A_HUMAN Ubiquitin-like protein 4A OS=Homo sapiens GN=UBL4A PE=1 SV=1
Length = 157
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 2 MIGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLL----LEELTNKE 57
++ LK+ +SEK + ++Q++LF+GK D + L + SK+ L LE++ +E
Sbjct: 22 LVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYSIGPNSKLNLVVKPLEKVLLEE 81
Query: 58 KKPKEVKDSP 67
+ + + DSP
Sbjct: 82 GEAQRLADSP 91
>sp|B1MTV8|UBL4A_CALMO Ubiquitin-like protein 4A OS=Callicebus moloch GN=UBL4A PE=3 SV=1
Length = 157
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 2 MIGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLL----LEELTNKE 57
++ LK+ +SEK + ++Q++LF+GK D + L + SK+ L LE++ +E
Sbjct: 22 LVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYSIGPNSKLNLVVKPLEKVLLEE 81
Query: 58 KKPKEVKDSP 67
+ + DSP
Sbjct: 82 GAGRRLADSP 91
>sp|Q5R4T1|UBL4A_PONAB Ubiquitin-like protein 4A OS=Pongo abelii GN=UBL4A PE=2 SV=1
Length = 157
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 2 MIGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLL----LEELTNKE 57
++ LK+ +SEK + ++Q++LF+GK D + L + SK+ L LE++ +E
Sbjct: 22 LVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYSIGPNSKLNLVVKPLEKVLLEE 81
Query: 58 KKPKEVKDSP 67
+ + + DSP
Sbjct: 82 GEAQRLADSP 91
>sp|B0KWT6|UBL4A_CALJA Ubiquitin-like protein 4A OS=Callithrix jacchus GN=UBL4A PE=3
SV=1
Length = 157
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 2 MIGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLL----LEELTNKE 57
++ LK+ +SEK + ++Q++LF+GK D + L + SK+ L LE++ +E
Sbjct: 22 LVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYSIGPNSKLNLVVKPLEKVLLEE 81
Query: 58 KKPKEVKDSP 67
+ + DSP
Sbjct: 82 GTGRRLADSP 91
>sp|B7NZQ9|UBL4A_RABIT Ubiquitin-like protein 4A OS=Oryctolagus cuniculus GN=UBL4A PE=3
SV=1
Length = 157
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLL----LEELTNKEK 58
+ LK+ +SEK + ++Q++LF+GK D + L + SK+ L LE++ E
Sbjct: 23 VSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYSIGPNSKLNLVVKPLEKVLLAEG 82
Query: 59 KPKEVKDSP 67
+ + DSP
Sbjct: 83 TARRLADSP 91
>sp|B2A159|CLPX_NATTJ ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Natranaerobius thermophilus (strain ATCC BAA-1301 /
DSM 18059 / JW/NM-WN-LF) GN=clpX PE=3 SV=1
Length = 420
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 26 RGKEKEDNEHL-----DVSGMKDKSKVLLLEELTNKEKKPKEVKDSP-EKKHEYA 74
RG EHL D+ M D +K ++ EE+ K+++P VKD+ EKKHE A
Sbjct: 366 RGLRAIVEEHLNDIMYDLPSMDDVNKCIITEEVIEKDERPMLVKDNQGEKKHESA 420
>sp|P14799|RS27A_NEUCR Ubiquitin-40S ribosomal protein S27a OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=ubi-3 PE=1 SV=4
Length = 154
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLL 50
I ++K+ I +K G+ P +Q+++F GK+ ED L ++ +S + L+
Sbjct: 23 IDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>sp|Q99933|BAG1_HUMAN BAG family molecular chaperone regulator 1 OS=Homo sapiens GN=BAG1
PE=1 SV=4
Length = 345
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 25/172 (14%)
Query: 2 MIGDLKKAISEKTGLDPQEQKVLFRGKE-KEDNEHLDVSGMKDKSKVLLLEELTNKEKKP 60
++ DL + + E G+ QK++F+GK KE L G++D +V+L+ K+ P
Sbjct: 169 VVQDLAQVVEEVIGVPQSFQKLIFKGKSLKEMETPLSALGIQDGCRVMLI----GKKNSP 224
Query: 61 KEVKDSPEKKH------EYAKDSEEMRKALQAIAGVRAEVDKLSERVASLEVAVNGGTKV 114
+E + + KH + A EE+ K L I D +E + L+ V
Sbjct: 225 QEEVELKKLKHLEKSVEKIADQLEELNKELTGIQQGFLPKDLQAEALCKLDRRVKA---- 280
Query: 115 PSEELDTSAELLMKELLKLDGI---EAEGEAKVQRKTEVRRVQKFHETLDNL 163
+ E MK L ++D + E +++++RK V++VQ F D +
Sbjct: 281 -------TIEQFMKILEEIDTLILPENFKDSRLKRKGLVKKVQAFLAECDTV 325
>sp|P05759|RS27A_YEAST Ubiquitin-40S ribosomal protein S31 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPS31 PE=1 SV=3
Length = 152
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLL 50
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+
Sbjct: 23 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>sp|P62979|RS27A_HUMAN Ubiquitin-40S ribosomal protein S27a OS=Homo sapiens GN=RPS27A
PE=1 SV=2
Length = 156
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P62978|RS27A_CAVPO Ubiquitin-40S ribosomal protein S27a OS=Cavia porcellus GN=RPS27A
PE=1 SV=2
Length = 156
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P62992|RS27A_BOVIN Ubiquitin-40S ribosomal protein S27a OS=Bos taurus GN=RPS27A PE=1
SV=2
Length = 156
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P79781|RS27A_CHICK Ubiquitin-40S ribosomal protein S27a OS=Gallus gallus GN=RPS27A
PE=2 SV=3
Length = 156
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P15357|RS27A_DROME Ubiquitin-40S ribosomal protein S27a OS=Drosophila melanogaster
GN=RpS27A PE=1 SV=2
Length = 156
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P68200|RS27A_ICTPU Ubiquitin-40S ribosomal protein S27a OS=Ictalurus punctatus
GN=rps27a PE=2 SV=2
Length = 156
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P62982|RS27A_RAT Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus
GN=Rps27a PE=1 SV=2
Length = 156
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P62983|RS27A_MOUSE Ubiquitin-40S ribosomal protein S27a OS=Mus musculus GN=Rps27a
PE=1 SV=2
Length = 156
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P68203|RS27A_SPOFR Ubiquitin-40S ribosomal protein S27a OS=Spodoptera frugiperda
PE=2 SV=2
Length = 156
Score = 30.8 bits (68), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|Q9ARZ9|R27AA_ORYSJ Ubiquitin-40S ribosomal protein S27a-1 OS=Oryza sativa subsp.
japonica GN=RPS27AA PE=2 SV=1
Length = 155
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P0CG86|RS271_HORVU Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare GN=MUB1
PE=3 SV=1
Length = 155
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P27923|RS27A_MAIZE Ubiquitin-40S ribosomal protein S27a OS=Zea mays GN=UBF9 PE=2
SV=2
Length = 155
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P68202|RS27A_PLUXY Ubiquitin-40S ribosomal protein S27a OS=Plutella xylostella PE=2
SV=2
Length = 155
Score = 30.8 bits (68), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P0CG87|RS272_HORVU Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare GN=MUB2
PE=3 SV=1
Length = 155
Score = 30.8 bits (68), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P69061|RS27A_KLULA Ubiquitin-40S ribosomal protein S27a OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=ubi3 PE=1 SV=2
Length = 150
Score = 30.8 bits (68), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLL 50
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+
Sbjct: 23 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>sp|P51431|R27AB_ORYSJ Ubiquitin-40S ribosomal protein S27a-2 OS=Oryza sativa subsp.
japonica GN=RPS27AB PE=2 SV=3
Length = 155
Score = 30.8 bits (68), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P0C016|RS27A_SCHPO Ubiquitin-40S ribosomal protein S27a OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubi3 PE=1 SV=2
Length = 150
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLL 50
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+
Sbjct: 23 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>sp|P0C8R3|RS27B_SCHPO Ubiquitin-40S ribosomal protein S27b OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubi5 PE=1 SV=2
Length = 150
Score = 30.8 bits (68), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLL 50
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+
Sbjct: 23 IDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>sp|P29504|RS27A_MANSE Ubiquitin-40S ribosomal protein S27a OS=Manduca sexta PE=2 SV=2
Length = 155
Score = 30.8 bits (68), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|P47905|RS27A_LUPAL Ubiquitin-40S ribosomal protein S27a OS=Lupinus albus PE=3 SV=2
Length = 155
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P14797|RS27A_DICDI Ubiquitin-40S ribosomal protein S27a OS=Dictyostelium discoideum
GN=ubqC PE=1 SV=2
Length = 154
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
>sp|Q7PHR1|KIF1A_ANOGA Kinesin-like protein unc-104 OS=Anopheles gambiae GN=unc-104 PE=3
SV=3
Length = 1644
Score = 30.4 bits (67), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 32 DNEHLDVS-GMKDKSKVLLLEELTNKEKKPKEVKDSPEKKHEYAKDSEEMRKALQAIAGV 90
D E+ D S G+K +++L EE + K PK ++ P+K +Y + EM L+ +
Sbjct: 896 DEENADFSNGVKQSARILFDEEQNGQHKVPK-IRTIPDKDEKYIEGGNEMGTKLEELEQE 954
Query: 91 RAEVDKLSERVASLEVAVNGGTKVPSEELDTSAELLMK-ELLKLDGIEAE 139
A+ + VAS N + P E L E + +L+ GI AE
Sbjct: 955 DADSGRGDSSVASELHESN--DQEPGEHLQPGKEFTFRVTVLQATGIAAE 1002
>sp|P59272|RS27A_DAUCA Ubiquitin-40S ribosomal protein S27a (Fragment) OS=Daucus carota
PE=2 SV=2
Length = 143
Score = 30.4 bits (67), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P62981|RS27A_SOLTU Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum GN=UBI3
PE=2 SV=2
Length = 156
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P62980|RS27A_SOLLC Ubiquitin-40S ribosomal protein S27a OS=Solanum lycopersicum
GN=UBI3 PE=3 SV=2
Length = 156
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P59233|R27AC_ARATH Ubiquitin-40S ribosomal protein S27a-3 OS=Arabidopsis thaliana
GN=RPS27AC PE=1 SV=2
Length = 157
Score = 30.4 bits (67), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P59232|R27AB_ARATH Ubiquitin-40S ribosomal protein S27a-2 OS=Arabidopsis thaliana
GN=RPS27AB PE=1 SV=2
Length = 157
Score = 30.4 bits (67), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
>sp|P59271|R27AA_ARATH Ubiquitin-40S ribosomal protein S27a-1 OS=Arabidopsis thaliana
GN=RPS27AA PE=1 SV=2
Length = 156
Score = 30.4 bits (67), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 3 IGDLKKAISEKTGLDPQEQKVLFRGKEKEDNEHLDVSGMKDKSKVLLLEEL 53
I ++K I +K G+ P +Q+++F GK+ ED L ++ +S + L+ L
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.127 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,179,472
Number of Sequences: 539616
Number of extensions: 3302223
Number of successful extensions: 17602
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 722
Number of HSP's that attempted gapping in prelim test: 15949
Number of HSP's gapped (non-prelim): 2016
length of query: 214
length of database: 191,569,459
effective HSP length: 113
effective length of query: 101
effective length of database: 130,592,851
effective search space: 13189877951
effective search space used: 13189877951
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 59 (27.3 bits)