Citrus Sinensis ID: 028094


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
MDSLSSWSSPESRVGNFSDEDVVLLASSNPKKRAGRKKFRETRHPVYRGVRRRDSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGRLACLNFADSSWRLPLPASTDPKDIQKAAAEAAEAFRPEKDLRRGDDKMDEEEAAERTTMSDDVFFMDEEAVFGMPRLLTNMAEGMLLPPPPPPQSNCGGYEEDDVESNADVSLWSYSV
cccccccccccccccccccccEEEccccccccccccccccccccccccEEEEcccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccHHHHHcccccccccccccHHHHccccHHHHHHHcccccccccccccccccccccccccccccccccccc
*********************************************VYRGVRRRDSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGRLACLNFADSSWRL**********IQKAAA*********************************VFFMDEEAVFGMPRLLTNMAEGMLLPPPPPPQSNCGGYEEDDVESNADVSLWSYSV
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MDSLSSWSSPESRVGNFSDEDVVLLASSNPKKRAGRKKFRETRHPVYRGVRRRDSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGRLACLNFADSSWRLPLPASTDPKDIQKAAAEAAEAFRPEKDLRRGDDKMDEEEAAERTTMSDDVFFMDEEAVFGMPRLLTNMAEGMLLPPPPPPQSNCGGYEEDDVESNADVSLWSYSV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Dehydration-responsive element-binding protein 1D Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates abscisic acid- and dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation.probableQ9FJ93
Dehydration-responsive element-binding protein 1E Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription.probableQ8H273
Dehydration-responsive element-binding protein 1G Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription.probableA2X899

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GCC, chain A
Confidence level:very confident
Coverage over the Query: 46-105
View the alignment between query and template
View the model in PyMOL
Template: 1U3E, chain M
Confidence level:probable
Coverage over the Query: 15-88
View the alignment between query and template
View the model in PyMOL