BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 028107
         (213 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O60062|MET2_SCHPO Homoserine O-acetyltransferase OS=Schizosaccharomyces pombe (strain
           972 / ATCC 24843) GN=met6 PE=3 SV=1
          Length = 489

 Score = 33.1 bits (74), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 35/75 (46%)

Query: 98  NTNRTSVFFRTFEASHWSGRNRNSCKVSRHPSLDTKGKDRSSISDTIIDVVKKTAAPVTV 157
           NT  ++  +  ++A  +  R   +C +S    LDT    R   SD+  +V+K  + PV V
Sbjct: 338 NTYFSAQSYLRYQAKKFVSRFDANCYISITKKLDTHDITRGRGSDSPKEVMKDLSLPVLV 397

Query: 158 LHVTPMGAFRGDAHV 172
           L +   G F  D  V
Sbjct: 398 LGIESDGLFTFDEQV 412


>sp|P35559|IDE_RAT Insulin-degrading enzyme OS=Rattus norvegicus GN=Ide PE=1 SV=1
          Length = 1019

 Score = 32.7 bits (73), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/20 (55%), Positives = 15/20 (75%)

Query: 169 DAHVGSWSDNPSVPDCSHWC 188
           D H+GS SD P++P  SH+C
Sbjct: 91  DVHIGSLSDPPNIPGLSHFC 110


>sp|Q9JHR7|IDE_MOUSE Insulin-degrading enzyme OS=Mus musculus GN=Ide PE=1 SV=1
          Length = 1019

 Score = 32.7 bits (73), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/20 (55%), Positives = 15/20 (75%)

Query: 169 DAHVGSWSDNPSVPDCSHWC 188
           D H+GS SD P++P  SH+C
Sbjct: 91  DVHIGSLSDPPNIPGLSHFC 110


>sp|Q8SX83|SPEN_DROME Protein split ends OS=Drosophila melanogaster GN=spen PE=1 SV=2
          Length = 5560

 Score = 32.3 bits (72), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 116  GRNRNSCKVSRHPSLDTKGKDRSSISDTIIDVVKKTAAPVTVLHVTPMGA 165
            G N  SC   +   L  K +DRS++ D I DVV+ T  P       P GA
Sbjct: 4494 GDNSESCNTRKSRRLQEK-EDRSTVDDIIEDVVRNTNTPTGTGPHLPKGA 4542


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.133    0.440 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,613,982
Number of Sequences: 539616
Number of extensions: 3354749
Number of successful extensions: 6108
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 6105
Number of HSP's gapped (non-prelim): 8
length of query: 213
length of database: 191,569,459
effective HSP length: 113
effective length of query: 100
effective length of database: 130,592,851
effective search space: 13059285100
effective search space used: 13059285100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)