BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 028109
         (213 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P0CB19|Y3081_ARATH Uncharacterized protein At3g50808 OS=Arabidopsis thaliana
           GN=At3g50808 PE=4 SV=1
          Length = 110

 Score = 43.9 bits (102), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 29/132 (21%)

Query: 79  IQKVLDISGVQTYVINSARVVFLNER---PQPRPGKGVTNTCEVCDRSL--LDSFRFCSL 133
           + + +DISG+  Y IN   +V++N+R      R    V + C++C+  +    S  FCS+
Sbjct: 1   MSQYMDISGIHLYSINGFPIVYINQRRGNNNHRSRSNVMHKCKICEWEIDAASSALFCSM 60

Query: 134 GCKNFQKRKNRLAMGSDSEDSYSSSIHGKLKNRDFSSNNNNKMQSFSPSTPPPTAVSHRI 193
            C      K R  +GS  ++                  N++++   S     P     + 
Sbjct: 61  EC------KFRSVLGSQLDELME---------------NSSEVTEISEEIDEPVM---KK 96

Query: 194 SKRRKGIPHRAP 205
             RRKG PHRAP
Sbjct: 97  RHRRKGSPHRAP 108


>sp|Q6CVA2|STE20_KLULA Serine/threonine-protein kinase STE20 OS=Kluyveromyces lactis
           (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
           NRRL Y-1140 / WM37) GN=STE20 PE=3 SV=1
          Length = 989

 Score = 33.9 bits (76), Expect = 0.94,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 150 DSEDSYSSSIHGKLKNRDFSSNNNNKMQSFSPSTPPPTAVSHRISKRRKGIPHRAPMGGL 209
           +++  YSS++ G L   DFS   NN  + F P+ P P         RR  IP  +P+  L
Sbjct: 518 NNDTPYSSNLQGPLLTNDFSETVNN--EKFIPTRPAPKPQGSSTVSRRVEIP--SPINSL 573


>sp|Q38V07|ADEC2_LACSS Adenine deaminase 2 OS=Lactobacillus sakei subsp. sakei (strain
           23K) GN=ade2 PE=3 SV=1
          Length = 580

 Score = 32.3 bits (72), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 46  NGAFCSLCLDYHKDHRAIQIRRSSYHD-VIRVSEIQKVLD-ISGVQTYVINSARVVFLNE 103
           N  FC LC D   D +++ +R + + D  IRV+ IQ  +D ++ +Q   IN+A+   L++
Sbjct: 264 NARFCCLCGD---DLQSVTLRETGHLDESIRVA-IQNGIDPLTAIQMATINTAQCTGLSD 319

Query: 104 RPQPRPG 110
           R    PG
Sbjct: 320 RGGIAPG 326


>sp|Q5A312|ALS7_CANAL Agglutinin-like protein 7 OS=Candida albicans (strain SC5314 / ATCC
            MYA-2876) GN=ALS7 PE=1 SV=1
          Length = 2000

 Score = 32.0 bits (71), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 15/90 (16%)

Query: 116  TCEVCDRSLLDSFRFCSLGCKNFQKRKNRLAMGSD---SEDSYSSSIHGKLKNRDFSSNN 172
            TC+V + S+  +    +LG  N           SD   SED+ SSS+ GK +    S+N+
Sbjct: 1609 TCDVSESSVEGNLSAMALGMSN-----------SDDGLSEDTRSSSVAGKEEIELTSTNS 1657

Query: 173  NNKMQSFSPSTPPPTAVSH-RISKRRKGIP 201
              ++   S S+  PT   H R+SK     P
Sbjct: 1658 VGEITLISYSSSSPTTHDHGRVSKSMGAAP 1687


>sp|Q9VNV3|DDX1_DROME ATP-dependent RNA helicase Ddx1 OS=Drosophila melanogaster GN=Ddx1
           PE=2 SV=1
          Length = 727

 Score = 30.4 bits (67), Expect = 9.8,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%)

Query: 7   DNRWPPWLKPLLRESFFVQCKLHPDSHKSECNMYCLDCMNGAFCSLCLDYHKDHRAIQIR 66
           D  W    +P+  +    +  +HP +H  E     +  + G +C   +D H   RAI   
Sbjct: 453 DTTWQSLRQPIGTDGVHDRDNVHPGNHSKETLSQAVKLLKGEYCVHAIDKHNMDRAIIFC 512

Query: 67  RS 68
           R+
Sbjct: 513 RT 514


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.135    0.428 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,657,805
Number of Sequences: 539616
Number of extensions: 3422047
Number of successful extensions: 11029
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 10986
Number of HSP's gapped (non-prelim): 49
length of query: 213
length of database: 191,569,459
effective HSP length: 113
effective length of query: 100
effective length of database: 130,592,851
effective search space: 13059285100
effective search space used: 13059285100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)