STRING 9.05 
  AT4G19100 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT4G19100
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast, membrane; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G52780.1); Has 490 Blast hits to 474 proteins in 126 species- Archae - 0; Bacteria - 105; Metazoa - 160; Fungi - 44; Plants - 41; Viruses - 2; Other Eukaryotes - 138 (source- NCBI BLink). (214 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT1G64355
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (199 aa)
      0.706
AT3G56650
thylakoid lumenal 20 kDa protein; thylakoid lumenal 20 kDa protein; LOCATED IN- thylakoid, thyl [...] (262 aa)
      0.692
CRR7
CRR7 (CHLORORESPIRATORY REDUCTION 7); Encodes a protein of the chloroplastic NAD(P)H dehydrogen [...] (156 aa)
      0.684
ATAB2
ATAB2; RNA binding; Encodes a chloroplast-localized protein ATAB2. ATAB2 is involved in the bio [...] (374 aa)
      0.672
AT2G28605
unknown protein; Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lu [...] (232 aa)
      0.663
PPL1
PPL1 (PsbP-like protein 1); calcium ion binding; PsbP-like protein 1 (PPL1); FUNCTIONS IN- calc [...] (230 aa)
      0.661
CCB1
CCB1 (COFACTOR ASSEMBLY OF COMPLEX C); COFACTOR ASSEMBLY OF COMPLEX C (CCB1); FUNCTIONS IN- mol [...] (267 aa)
      0.660
HCF136
HCF136; protein binding; encodes a stability and/or assembly factor of photosystem II ; Essenti [...] (403 aa)
      0.653
AT4G24750
unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (292 aa)
       0.647
AT5G11450
oxygen-evolving complex-related; oxygen-evolving complex-related; FUNCTIONS IN- calcium ion bin [...] (297 aa)
      0.640
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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