Your job contains 1 sequence.
>028115
MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNM
IVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVA
FLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTSGTAKAVISCFQKLGVSFDMDQIQMI
RDPKQQLEMVGVPEEHLPGHAFHMYHLTSPDQT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028115
(213 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2080482 - symbol:AT3G59890 species:3702 "Arabi... 914 1.0e-91 1
TAIR|locus:2051854 - symbol:AT2G44040 species:3702 "Arabi... 913 1.3e-91 1
TIGR_CMR|CJE_0190 - symbol:CJE_0190 "dihydrodipicolinate ... 118 3.0e-05 1
TIGR_CMR|CBU_1709 - symbol:CBU_1709 "dihydrodipicolinate ... 114 9.0e-05 1
UNIPROTKB|Q9KPH7 - symbol:dapB "4-hydroxy-tetrahydrodipic... 108 0.00064 1
TIGR_CMR|VC_2391 - symbol:VC_2391 "dihydrodipicolinate re... 108 0.00064 1
>TAIR|locus:2080482 [details] [associations]
symbol:AT3G59890 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=IEA;IGI;ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0070402
"NADPH binding" evidence=IEA] InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR011859 InterPro:IPR022663 Pfam:PF01113 Pfam:PF05173
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:3.40.50.720 GO:GO:0070402
GO:GO:0009089 GO:GO:0019877 EMBL:AL138647 eggNOG:COG0289
HOGENOM:HOG000265601 KO:K00215 ProtClustDB:PLN02775 GO:GO:0008839
PANTHER:PTHR20836 TIGRFAMs:TIGR02130 EMBL:AY087505 EMBL:BT026511
IPI:IPI00521803 IPI:IPI00523614 PIR:T47813 RefSeq:NP_567088.1
RefSeq:NP_974464.1 UniGene:At.34540 ProteinModelPortal:Q8LB01
SMR:Q8LB01 STRING:Q8LB01 PaxDb:Q8LB01 PRIDE:Q8LB01
EnsemblPlants:AT3G59890.1 GeneID:825159 KEGG:ath:AT3G59890
TAIR:At3g59890 InParanoid:Q8LB01 OMA:VVDYTVP PhylomeDB:Q8LB01
Genevestigator:Q8LB01 Uniprot:Q8LB01
Length = 349
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 170/213 (79%), Positives = 197/213 (92%)
Query: 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNM 60
MGKAVIKAAD+AG+ +VP SFG+ EE+GQ VEVCGKEI VHG ++RE VL+SVF+KYP +
Sbjct: 86 MGKAVIKAADSAGVNIVPTSFGSVEEAGQTVEVCGKEILVHGPTEREKVLSSVFEKYPEL 145
Query: 61 IVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVA 120
IVVDYT+P+AVN NAELY KVGVPFVMGTTGGDR RL++T+E S +YAVISPQMGKQVVA
Sbjct: 146 IVVDYTIPSAVNDNAELYGKVGVPFVMGTTGGDRTRLYKTVEESKIYAVISPQMGKQVVA 205
Query: 121 FLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTSGTAKAVISCFQKLGVSFDMDQIQMI 180
FLAAMEIM+EQFPGAF+GYSL+V+ESHQA KLD SGTAKAVISCFQKLGVS+DMDQIQ+I
Sbjct: 206 FLAAMEIMSEQFPGAFAGYSLEVMESHQASKLDASGTAKAVISCFQKLGVSYDMDQIQLI 265
Query: 181 RDPKQQLEMVGVPEEHLPGHAFHMYHLTSPDQT 213
RDPKQQ+E+VGVPEEH+ GHAFH+YHLTSPD+T
Sbjct: 266 RDPKQQIEVVGVPEEHVSGHAFHLYHLTSPDKT 298
>TAIR|locus:2051854 [details] [associations]
symbol:AT2G44040 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=IEA;IGI;ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IEA;IDA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0070402
"NADPH binding" evidence=IEA] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR011859 InterPro:IPR022663 Pfam:PF01113 Pfam:PF05173
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0009570 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:3.40.50.720 GO:GO:0070402
GO:GO:0009089 GO:GO:0019877 EMBL:AC004005 EMBL:BT008540
EMBL:AY084299 EMBL:AK118845 IPI:IPI00545380 PIR:T00684
RefSeq:NP_566006.1 UniGene:At.36804 ProteinModelPortal:O80574
SMR:O80574 IntAct:O80574 STRING:O80574 PaxDb:O80574 PRIDE:O80574
EnsemblPlants:AT2G44040.1 GeneID:819009 KEGG:ath:AT2G44040
TAIR:At2g44040 eggNOG:COG0289 HOGENOM:HOG000265601
InParanoid:O80574 KO:K00215 OMA:NTFDVLD PhylomeDB:O80574
ProtClustDB:PLN02775 Genevestigator:O80574 GO:GO:0008839
PANTHER:PTHR20836 TIGRFAMs:TIGR02130 Uniprot:O80574
Length = 347
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 170/213 (79%), Positives = 197/213 (92%)
Query: 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNM 60
MGKAVIKAAD+AG+ +VP+SFG+ E GQ+VEVCGKEI VHG ++RE VL+SVF+K+P +
Sbjct: 84 MGKAVIKAADSAGVNIVPISFGSAGEDGQRVEVCGKEITVHGPTEREKVLSSVFEKHPEL 143
Query: 61 IVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVA 120
IVVDYT+P+AVN NAELYSKVGVPFVMGTTGGDR +L+ET+E + +YAVISPQMGKQVVA
Sbjct: 144 IVVDYTIPSAVNDNAELYSKVGVPFVMGTTGGDRNKLYETVEEAKIYAVISPQMGKQVVA 203
Query: 121 FLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTSGTAKAVISCFQKLGVSFDMDQIQMI 180
FLAAMEIMAEQFPGAFSGYSL V+ESHQA KLD SGTAKAVISCFQ+LGVS+DMDQIQ+I
Sbjct: 204 FLAAMEIMAEQFPGAFSGYSLDVMESHQASKLDASGTAKAVISCFQELGVSYDMDQIQLI 263
Query: 181 RDPKQQLEMVGVPEEHLPGHAFHMYHLTSPDQT 213
RDPKQQ+EMVGVPEEH+ GHAFH+YHLTSPD+T
Sbjct: 264 RDPKQQVEMVGVPEEHISGHAFHLYHLTSPDET 296
>TIGR_CMR|CJE_0190 [details] [associations]
symbol:CJE_0190 "dihydrodipicolinate reductase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0070402 GO:GO:0009089 GO:GO:0019877 eggNOG:COG0289 KO:K00215
GO:GO:0008839 PANTHER:PTHR20836 TIGRFAMs:TIGR00036 OMA:IVMAPNM
ProtClustDB:PRK00048 RefSeq:YP_178214.1 ProteinModelPortal:Q5HWX1
STRING:Q5HWX1 GeneID:3230953 KEGG:cjr:CJE0190 PATRIC:20042089
HOGENOM:HOG000227153 BioCyc:CJEJ195099:GJC0-195-MONOMER
Uniprot:Q5HWX1
Length = 242
Score = 118 (46.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 40/166 (24%), Positives = 79/166 (47%)
Query: 21 FGTEEESGQKVEVCGK---EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77
+G + G+++E C K + Q+ L D+ L +F+K + +++D++ P+ +
Sbjct: 7 YGAKGRMGKQIEECLKSETQAQISILYDKGGNLGELFEK--SDVIIDFSSPSGTHELLNY 64
Query: 78 YSKVGVPFVMGTTGGDRVRLHETIENSNVYAVI---SPQMGKQVVAFLAAMEIMAEQFPG 134
+ P V+GTTG D LH S V + + +G V+ +LA+ A Q
Sbjct: 65 ARTMPKPLVIGTTGLDEKILHLMQSASEVMPIFYATNMSLGVAVLNYLASK---ASQM-- 119
Query: 135 AFSGYSLQVLESHQAGKLDT-SGTAKAVISCFQKLGVSFDMDQIQM 179
+ +++LE H K D SGTA + K + +++++++
Sbjct: 120 -LRNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKAR-NLELEKVRV 163
>TIGR_CMR|CBU_1709 [details] [associations]
symbol:CBU_1709 "dihydrodipicolinate reductase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0070402 GO:GO:0009089 GO:GO:0019877 eggNOG:COG0289 KO:K00215
GO:GO:0008839 PANTHER:PTHR20836 HOGENOM:HOG000227154 OMA:IHVHAVR
TIGRFAMs:TIGR00036 ProtClustDB:PRK00048 EMBL:M74242 PIR:B44791
RefSeq:NP_820690.1 ProteinModelPortal:P24703 PRIDE:P24703
GeneID:1209620 KEGG:cbu:CBU_1709 PATRIC:17932153
BioCyc:CBUR227377:GJ7S-1681-MONOMER Uniprot:P24703
Length = 239
Score = 114 (45.2 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 43/164 (26%), Positives = 73/164 (44%)
Query: 46 RESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGG--DRVRL-HETIE 102
R+ LA +V+D+T P +V NAE+ + G V+GTTG +++ L +
Sbjct: 36 RQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTGLTLEQIALLDKQCR 95
Query: 103 NSNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDT-SGTAKAV 161
N + A+++P V + + A FP ++++E H + K+D SGTA
Sbjct: 96 NKKLGAIVAPNFSVGAVLMMKYAKEAAHYFP------DVEIIEMHHSQKIDAPSGTA--- 146
Query: 162 ISCFQKLGVSFDMDQIQMIRDPKQQLEMVGVPEE--HLPGHAFH 203
I Q +G + + +D + G+P LPG H
Sbjct: 147 IKTAQMIGEMRSSKKDEPFKDRARGEIKNGIPIHSIRLPGLFSH 190
>UNIPROTKB|Q9KPH7 [details] [associations]
symbol:dapB "4-hydroxy-tetrahydrodipicolinate reductase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008839 "4-hydroxy-tetrahydrodipicolinate reductase"
evidence=ISS] [GO:0009089 "lysine biosynthetic process via
diaminopimelate" evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846
InterPro:IPR011770 InterPro:IPR022663 InterPro:IPR022664
InterPro:IPR023940 Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161
PROSITE:PS01298 UniPathway:UPA00034 InterPro:IPR016040
GO:GO:0005737 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0070402 GO:GO:0009089 GO:GO:0019877
eggNOG:COG0289 KO:K00215 GO:GO:0008839 PANTHER:PTHR20836
TIGRFAMs:TIGR00036 ProtClustDB:PRK00048 OMA:FYLEGEY PIR:C82080
RefSeq:NP_232021.1 ProteinModelPortal:Q9KPH7 SMR:Q9KPH7
DNASU:2613060 GeneID:2613060 KEGG:vch:VC2391 PATRIC:20083805
Uniprot:Q9KPH7
Length = 269
Score = 108 (43.1 bits), Expect = 0.00064, P = 0.00064
Identities = 45/164 (27%), Positives = 73/164 (44%)
Query: 1 MGKAVIKAADAAGLELVPVSFGTEEES--GQKV-EVCGKEIQVHGLSDRESVLASVFDKY 57
MG+ ++KA L + E S G + E+CG Q L D FD
Sbjct: 13 MGRNLVKATHQNPLSELGAGSERPESSLVGVDIGELCGIGKQGIVLVDNLEQAVEQFD-- 70
Query: 58 PNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENS--NVYAVISPQMG 115
+++D+T PA+ N L + G V+GTTG + +TIE + + V++P
Sbjct: 71 ---VIIDFTAPASTLANLALCEQHGKKLVIGTTGFTDAQ-RQTIEQAAKKIPIVMAPNYS 126
Query: 116 KQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDT-SGTA 158
V +E A + G + ++++E+H K+D SGTA
Sbjct: 127 VGVNLVFKLLE-KAAKVMGDYC--DIEIIEAHHRHKVDAPSGTA 167
>TIGR_CMR|VC_2391 [details] [associations]
symbol:VC_2391 "dihydrodipicolinate reductase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0070402 GO:GO:0009089 GO:GO:0019877 eggNOG:COG0289 KO:K00215
GO:GO:0008839 PANTHER:PTHR20836 TIGRFAMs:TIGR00036
ProtClustDB:PRK00048 OMA:FYLEGEY PIR:C82080 RefSeq:NP_232021.1
ProteinModelPortal:Q9KPH7 SMR:Q9KPH7 DNASU:2613060 GeneID:2613060
KEGG:vch:VC2391 PATRIC:20083805 Uniprot:Q9KPH7
Length = 269
Score = 108 (43.1 bits), Expect = 0.00064, P = 0.00064
Identities = 45/164 (27%), Positives = 73/164 (44%)
Query: 1 MGKAVIKAADAAGLELVPVSFGTEEES--GQKV-EVCGKEIQVHGLSDRESVLASVFDKY 57
MG+ ++KA L + E S G + E+CG Q L D FD
Sbjct: 13 MGRNLVKATHQNPLSELGAGSERPESSLVGVDIGELCGIGKQGIVLVDNLEQAVEQFD-- 70
Query: 58 PNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENS--NVYAVISPQMG 115
+++D+T PA+ N L + G V+GTTG + +TIE + + V++P
Sbjct: 71 ---VIIDFTAPASTLANLALCEQHGKKLVIGTTGFTDAQ-RQTIEQAAKKIPIVMAPNYS 126
Query: 116 KQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDT-SGTA 158
V +E A + G + ++++E+H K+D SGTA
Sbjct: 127 VGVNLVFKLLE-KAAKVMGDYC--DIEIIEAHHRHKVDAPSGTA 167
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 213 213 0.00084 112 3 11 22 0.39 33
31 0.49 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 568 (60 KB)
Total size of DFA: 152 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.66u 0.09s 17.75t Elapsed: 00:00:00
Total cpu time: 17.67u 0.09s 17.76t Elapsed: 00:00:00
Start: Fri May 10 03:13:39 2013 End: Fri May 10 03:13:39 2013