Query 028115
Match_columns 213
No_of_seqs 186 out of 1232
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 10:16:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028115.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028115hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ijp_A DHPR, dihydrodipicolina 100.0 5.1E-50 1.8E-54 354.5 19.6 199 1-213 33-246 (288)
2 4f3y_A DHPR, dihydrodipicolina 100.0 1E-48 3.6E-53 343.4 19.4 199 1-213 19-231 (272)
3 1vm6_A DHPR, dihydrodipicolina 100.0 1.4E-47 4.9E-52 328.3 17.6 161 1-213 24-186 (228)
4 3qy9_A DHPR, dihydrodipicolina 100.0 1.7E-46 5.8E-51 324.7 16.3 186 1-213 14-206 (243)
5 1dih_A Dihydrodipicolinate red 100.0 2.5E-44 8.7E-49 315.2 17.5 198 1-212 17-229 (273)
6 1p9l_A Dihydrodipicolinate red 100.0 4.8E-43 1.6E-47 303.4 18.0 180 1-213 12-204 (245)
7 1oi7_A Succinyl-COA synthetase 99.0 1.2E-09 4E-14 95.9 8.4 105 1-118 19-126 (288)
8 2yv2_A Succinyl-COA synthetase 99.0 1.1E-09 3.9E-14 96.4 8.4 105 1-118 25-133 (297)
9 2yv1_A Succinyl-COA ligase [AD 99.0 1.4E-09 4.6E-14 95.7 8.8 105 1-118 25-132 (294)
10 2nu8_A Succinyl-COA ligase [AD 98.6 1.9E-07 6.5E-12 81.6 10.3 101 1-114 19-123 (288)
11 1f06_A MESO-diaminopimelate D- 98.6 1.4E-08 4.9E-13 89.6 2.8 140 1-157 14-162 (320)
12 2dc1_A L-aspartate dehydrogena 98.4 2E-06 6.7E-11 72.1 9.8 125 1-153 11-140 (236)
13 3mwd_B ATP-citrate synthase; A 98.1 2.1E-05 7.3E-10 70.4 11.3 96 12-113 36-138 (334)
14 3bio_A Oxidoreductase, GFO/IDH 97.6 0.00013 4.4E-09 63.7 7.1 114 1-127 20-139 (304)
15 2fp4_A Succinyl-COA ligase [GD 97.5 0.00084 2.9E-08 59.0 11.8 101 1-114 26-131 (305)
16 3ing_A Homoserine dehydrogenas 97.4 0.00026 8.8E-09 62.9 7.0 146 1-165 15-182 (325)
17 3ff4_A Uncharacterized protein 97.4 0.00094 3.2E-08 51.3 9.1 98 2-120 20-117 (122)
18 3upl_A Oxidoreductase; rossman 97.3 0.00088 3E-08 62.1 10.0 138 1-152 34-197 (446)
19 3euw_A MYO-inositol dehydrogen 97.2 0.0028 9.5E-08 55.3 11.4 117 1-125 15-138 (344)
20 3cea_A MYO-inositol 2-dehydrog 97.2 0.0052 1.8E-07 53.3 12.4 117 1-125 19-145 (346)
21 3e9m_A Oxidoreductase, GFO/IDH 97.1 0.0058 2E-07 53.2 12.6 117 1-125 16-140 (330)
22 3c1a_A Putative oxidoreductase 97.1 0.004 1.4E-07 53.7 11.3 116 1-126 21-143 (315)
23 3evn_A Oxidoreductase, GFO/IDH 97.1 0.015 5.1E-07 50.4 14.8 117 1-125 16-140 (329)
24 1j5p_A Aspartate dehydrogenase 97.1 0.00086 2.9E-08 57.9 6.6 90 1-110 23-117 (253)
25 1ydw_A AX110P-like protein; st 97.0 0.0045 1.5E-07 54.4 10.7 108 1-114 17-131 (362)
26 4hkt_A Inositol 2-dehydrogenas 97.0 0.0068 2.3E-07 52.5 11.7 116 1-125 14-136 (331)
27 2d59_A Hypothetical protein PH 96.9 0.0077 2.6E-07 46.9 10.3 100 1-119 37-136 (144)
28 2ho3_A Oxidoreductase, GFO/IDH 96.9 0.012 4.2E-07 50.7 12.5 118 1-126 12-136 (325)
29 3q2i_A Dehydrogenase; rossmann 96.9 0.012 4.1E-07 51.5 12.4 117 1-125 24-148 (354)
30 3ezy_A Dehydrogenase; structur 96.9 0.0084 2.9E-07 52.3 11.4 117 1-125 13-137 (344)
31 2glx_A 1,5-anhydro-D-fructose 96.9 0.0084 2.9E-07 51.7 11.0 117 1-125 11-135 (332)
32 3db2_A Putative NADPH-dependen 96.8 0.0069 2.4E-07 53.0 10.2 117 1-125 16-139 (354)
33 3moi_A Probable dehydrogenase; 96.8 0.0073 2.5E-07 53.8 10.5 117 1-125 14-137 (387)
34 1tlt_A Putative oxidoreductase 96.8 0.0036 1.2E-07 54.0 7.9 103 1-114 16-125 (319)
35 3fhl_A Putative oxidoreductase 96.7 0.0092 3.2E-07 52.5 10.2 115 1-125 16-138 (362)
36 3do5_A HOM, homoserine dehydro 96.7 0.0012 4E-08 58.7 4.3 120 1-124 13-153 (327)
37 3kux_A Putative oxidoreductase 96.7 0.016 5.6E-07 50.7 11.6 115 1-125 18-140 (352)
38 3mz0_A Inositol 2-dehydrogenas 96.7 0.016 5.4E-07 50.5 11.3 119 1-125 13-140 (344)
39 1h6d_A Precursor form of gluco 96.6 0.009 3.1E-07 54.3 9.9 118 1-125 94-223 (433)
40 4ew6_A D-galactose-1-dehydroge 96.6 0.023 7.7E-07 49.7 12.0 110 1-124 36-153 (330)
41 1y81_A Conserved hypothetical 96.6 0.021 7.2E-07 44.2 10.2 99 1-118 29-127 (138)
42 3e82_A Putative oxidoreductase 96.5 0.012 4E-07 52.0 9.8 116 1-126 18-141 (364)
43 3pff_A ATP-citrate synthase; p 96.5 0.011 3.9E-07 58.5 10.5 106 2-113 506-624 (829)
44 3o9z_A Lipopolysaccaride biosy 96.5 0.053 1.8E-06 46.9 13.4 109 1-114 15-132 (312)
45 3e18_A Oxidoreductase; dehydro 96.5 0.012 4.1E-07 51.9 9.4 116 1-125 16-138 (359)
46 3rc1_A Sugar 3-ketoreductase; 96.4 0.0094 3.2E-07 52.4 8.3 117 1-125 38-162 (350)
47 3ec7_A Putative dehydrogenase; 96.4 0.04 1.4E-06 48.5 12.4 120 1-126 34-162 (357)
48 3gdo_A Uncharacterized oxidore 96.4 0.0085 2.9E-07 52.8 7.8 115 1-125 16-138 (358)
49 3i23_A Oxidoreductase, GFO/IDH 96.2 0.042 1.4E-06 48.0 11.4 116 1-125 13-138 (349)
50 3f4l_A Putative oxidoreductase 96.2 0.021 7E-07 49.9 9.1 116 1-125 13-138 (345)
51 1iuk_A Hypothetical protein TT 96.1 0.022 7.4E-07 44.2 8.1 103 1-120 28-130 (140)
52 4ina_A Saccharopine dehydrogen 96.1 0.025 8.6E-07 51.0 9.3 133 1-146 12-167 (405)
53 2ixa_A Alpha-N-acetylgalactosa 96.0 0.021 7.3E-07 51.8 8.5 120 1-124 31-163 (444)
54 3m2t_A Probable dehydrogenase; 96.0 0.043 1.5E-06 48.3 10.1 108 1-115 16-129 (359)
55 1zh8_A Oxidoreductase; TM0312, 95.8 0.037 1.3E-06 48.3 9.1 117 1-125 30-155 (340)
56 3ip3_A Oxidoreductase, putativ 95.8 0.048 1.7E-06 47.3 9.8 117 2-125 14-142 (337)
57 3btv_A Galactose/lactose metab 95.7 0.049 1.7E-06 49.4 9.5 118 1-125 35-168 (438)
58 3c8m_A Homoserine dehydrogenas 95.7 0.0044 1.5E-07 54.8 2.5 119 1-124 17-159 (331)
59 3oa2_A WBPB; oxidoreductase, s 95.5 0.27 9.1E-06 42.6 13.1 120 1-125 15-146 (318)
60 3u3x_A Oxidoreductase; structu 95.5 0.1 3.6E-06 45.9 10.6 113 5-124 42-161 (361)
61 2g0t_A Conserved hypothetical 95.4 0.12 4E-06 46.4 10.8 89 12-109 49-148 (350)
62 4had_A Probable oxidoreductase 95.3 0.11 3.7E-06 45.0 10.0 117 1-125 34-159 (350)
63 3dty_A Oxidoreductase, GFO/IDH 95.1 0.094 3.2E-06 46.7 9.1 119 1-124 26-157 (398)
64 3uuw_A Putative oxidoreductase 94.9 0.037 1.3E-06 47.3 5.9 104 1-114 17-126 (308)
65 2nvw_A Galactose/lactose metab 94.9 0.097 3.3E-06 48.3 9.0 119 1-125 54-188 (479)
66 3ohs_X Trans-1,2-dihydrobenzen 94.8 0.13 4.5E-06 44.4 9.1 117 1-125 13-139 (334)
67 2duw_A Putative COA-binding pr 94.6 0.11 3.8E-06 40.2 7.5 101 1-118 28-128 (145)
68 3mtj_A Homoserine dehydrogenas 94.6 0.023 7.7E-07 52.5 3.9 113 1-123 21-147 (444)
69 1b7g_O Protein (glyceraldehyde 94.5 0.059 2E-06 47.8 6.3 86 1-90 12-109 (340)
70 3v5n_A Oxidoreductase; structu 94.5 0.1 3.4E-06 47.0 7.9 119 1-124 51-182 (417)
71 3keo_A Redox-sensing transcrip 94.3 0.047 1.6E-06 45.7 4.9 83 1-91 95-181 (212)
72 2p2s_A Putative oxidoreductase 94.1 0.84 2.9E-05 39.2 12.7 115 4-125 19-140 (336)
73 3oqb_A Oxidoreductase; structu 94.0 0.078 2.7E-06 46.7 5.9 77 44-124 73-155 (383)
74 1xea_A Oxidoreductase, GFO/IDH 93.8 0.36 1.2E-05 41.4 9.8 117 1-126 13-137 (323)
75 1cf2_P Protein (glyceraldehyde 93.7 0.1 3.6E-06 46.1 6.2 84 1-93 12-112 (337)
76 3nkl_A UDP-D-quinovosamine 4-d 93.7 0.38 1.3E-05 35.9 8.6 79 1-86 15-96 (141)
77 2vt3_A REX, redox-sensing tran 93.6 0.23 8E-06 41.3 7.8 107 1-125 96-205 (215)
78 3ic5_A Putative saccharopine d 93.3 0.5 1.7E-05 33.4 8.3 85 1-90 16-101 (118)
79 2dt5_A AT-rich DNA-binding pro 93.2 0.18 6.2E-06 41.8 6.5 106 1-125 91-200 (211)
80 2czc_A Glyceraldehyde-3-phosph 93.1 0.17 5.7E-06 44.5 6.4 83 1-92 13-112 (334)
81 1lc0_A Biliverdin reductase A; 92.9 1.2 4.1E-05 37.9 11.5 103 1-117 18-128 (294)
82 4gqa_A NAD binding oxidoreduct 92.6 0.48 1.6E-05 42.0 8.9 106 12-125 57-169 (412)
83 4fb5_A Probable oxidoreductase 92.6 0.99 3.4E-05 38.9 10.7 106 12-125 55-167 (393)
84 2yxb_A Coenzyme B12-dependent 91.7 3.9 0.00013 32.0 12.9 80 46-127 58-145 (161)
85 3lte_A Response regulator; str 90.9 2.9 0.0001 29.5 10.1 72 44-116 37-112 (132)
86 2obn_A Hypothetical protein; s 90.9 0.76 2.6E-05 41.1 8.1 86 10-103 31-126 (349)
87 2ejw_A HDH, homoserine dehydro 90.4 0.13 4.4E-06 45.6 2.6 106 1-122 14-132 (332)
88 2csu_A 457AA long hypothetical 89.7 1.5 5E-05 40.2 9.2 75 2-93 24-100 (457)
89 3lua_A Response regulator rece 89.2 3.5 0.00012 29.6 9.4 67 44-111 36-110 (140)
90 1nvm_B Acetaldehyde dehydrogen 89.1 0.67 2.3E-05 40.4 6.2 86 1-90 15-105 (312)
91 3kto_A Response regulator rece 88.8 5 0.00017 28.7 10.4 74 43-117 36-114 (136)
92 3cnb_A DNA-binding response re 88.8 4.6 0.00016 28.7 9.7 82 44-129 41-128 (143)
93 2g1u_A Hypothetical protein TM 88.1 6.9 0.00024 29.4 12.2 116 1-122 30-147 (155)
94 3d1l_A Putative NADP oxidoredu 88.0 0.82 2.8E-05 37.8 5.8 88 1-98 21-111 (266)
95 1y80_A Predicted cobalamin bin 87.8 8.9 0.0003 30.7 11.8 73 47-124 129-208 (210)
96 3abi_A Putative uncharacterize 87.8 0.26 8.8E-06 43.3 2.6 72 57-132 77-150 (365)
97 2zay_A Response regulator rece 87.6 6.2 0.00021 28.4 10.5 77 38-116 33-115 (147)
98 3cg0_A Response regulator rece 87.0 6.4 0.00022 27.9 9.8 68 44-112 41-112 (140)
99 3dmy_A Protein FDRA; predicted 86.9 1.1 3.9E-05 41.5 6.6 73 37-114 20-94 (480)
100 3kht_A Response regulator; PSI 86.8 6.9 0.00024 28.0 11.4 69 43-112 37-111 (144)
101 2z2v_A Hypothetical protein PH 86.7 0.63 2.2E-05 41.3 4.6 122 1-132 27-150 (365)
102 3gt7_A Sensor protein; structu 86.7 7.7 0.00026 28.4 11.2 69 43-112 37-111 (154)
103 3e5r_O PP38, glyceraldehyde-3- 86.4 1.6 5.6E-05 38.5 7.0 80 1-84 14-119 (337)
104 2ph5_A Homospermidine synthase 86.2 0.59 2E-05 43.6 4.2 81 1-87 24-112 (480)
105 3c85_A Putative glutathione-re 86.2 8.3 0.00028 29.6 10.5 121 1-127 50-174 (183)
106 2qxy_A Response regulator; reg 86.2 7.3 0.00025 27.7 11.1 69 43-112 34-105 (142)
107 4h3v_A Oxidoreductase domain p 86.0 5.5 0.00019 34.0 10.2 105 13-125 37-151 (390)
108 3gl9_A Response regulator; bet 85.9 7.2 0.00024 27.4 11.1 72 44-116 33-109 (122)
109 3l49_A ABC sugar (ribose) tran 85.8 12 0.0004 30.2 11.7 41 51-91 55-95 (291)
110 3t6k_A Response regulator rece 85.6 8 0.00027 27.7 11.4 72 44-116 35-111 (136)
111 1u8f_O GAPDH, glyceraldehyde-3 85.4 1.1 3.9E-05 39.4 5.5 88 1-91 14-124 (335)
112 1dbw_A Transcriptional regulat 85.2 7.2 0.00025 27.2 9.0 72 44-116 34-108 (126)
113 1k66_A Phytochrome response re 84.8 8.6 0.00029 27.3 9.4 72 44-116 39-125 (149)
114 4gmf_A Yersiniabactin biosynth 84.7 2 6.8E-05 38.3 6.8 118 1-130 17-146 (372)
115 1srr_A SPO0F, sporulation resp 84.7 4.6 0.00016 28.2 7.7 72 44-116 34-108 (124)
116 3f6p_A Transcriptional regulat 84.5 8.3 0.00028 26.9 10.0 72 44-116 33-106 (120)
117 2h9a_A Carbon monoxide dehydro 84.4 3.5 0.00012 38.0 8.4 65 61-130 158-222 (445)
118 1k68_A Phytochrome response re 84.1 8.7 0.0003 26.9 10.5 72 44-116 35-118 (140)
119 2rdm_A Response regulator rece 83.8 7.9 0.00027 27.0 8.6 52 44-95 36-92 (132)
120 2qzj_A Two-component response 83.7 9.9 0.00034 27.2 10.4 66 44-110 35-103 (136)
121 3cfy_A Putative LUXO repressor 83.6 10 0.00035 27.2 10.2 69 43-112 34-106 (137)
122 3fwz_A Inner membrane protein 83.2 12 0.0004 27.7 10.2 117 1-124 18-137 (140)
123 1ff9_A Saccharopine reductase; 83.0 17 0.00057 33.0 12.4 122 1-128 14-141 (450)
124 3cky_A 2-hydroxymethyl glutara 83.0 4.8 0.00016 33.5 8.2 89 1-101 15-112 (301)
125 3bul_A Methionine synthase; tr 83.0 15 0.00053 34.8 12.5 80 46-125 138-223 (579)
126 2pl1_A Transcriptional regulat 82.8 8 0.00027 26.5 8.2 72 44-116 31-105 (121)
127 3m9w_A D-xylose-binding peripl 82.3 9.8 0.00033 31.3 9.8 40 51-90 52-91 (313)
128 1jay_A Coenzyme F420H2:NADP+ o 82.3 4.5 0.00015 31.9 7.4 83 1-93 12-101 (212)
129 3m6m_D Sensory/regulatory prot 82.2 12 0.00041 27.1 9.3 73 43-116 44-123 (143)
130 2rjn_A Response regulator rece 81.8 13 0.00043 27.0 12.5 70 43-112 37-110 (154)
131 3snk_A Response regulator CHEY 81.8 3.9 0.00013 29.2 6.3 78 38-116 40-120 (135)
132 3ezx_A MMCP 1, monomethylamine 81.6 13 0.00044 30.4 10.1 73 47-124 133-214 (215)
133 2i2x_B MTAC, methyltransferase 81.4 22 0.00076 29.6 12.1 70 51-125 168-242 (258)
134 4djd_C C/Fe-SP, corrinoid/iron 80.5 7 0.00024 36.1 8.8 80 46-130 143-223 (446)
135 3cz5_A Two-component response 80.0 10 0.00035 27.5 8.3 68 44-112 38-109 (153)
136 3llv_A Exopolyphosphatase-rela 80.0 14 0.00049 26.8 9.2 118 1-124 17-135 (141)
137 3ilh_A Two component response 79.9 13 0.00043 26.3 8.6 74 43-116 41-126 (146)
138 1qkk_A DCTD, C4-dicarboxylate 79.8 15 0.00051 26.6 12.5 72 44-116 34-108 (155)
139 1gad_O D-glyceraldehyde-3-phos 79.8 6.3 0.00022 34.6 8.1 89 1-92 12-122 (330)
140 1rm4_O Glyceraldehyde 3-phosph 79.4 7.2 0.00025 34.4 8.4 89 1-93 12-126 (337)
141 3l6u_A ABC-type sugar transpor 79.2 14 0.00048 29.8 9.6 41 50-90 57-97 (293)
142 3nhm_A Response regulator; pro 79.0 11 0.00037 26.4 8.0 72 43-116 33-109 (133)
143 2hq1_A Glucose/ribitol dehydro 79.0 8.7 0.0003 30.5 8.2 74 1-93 17-94 (247)
144 2gkg_A Response regulator homo 78.9 12 0.00042 25.5 8.1 71 44-116 36-112 (127)
145 3eod_A Protein HNR; response r 78.9 14 0.00048 25.7 12.9 70 43-112 37-109 (130)
146 1ebf_A Homoserine dehydrogenas 78.9 3.1 0.00011 36.9 5.8 112 1-117 15-148 (358)
147 3hdv_A Response regulator; PSI 78.4 15 0.00051 25.8 9.2 72 44-116 38-114 (136)
148 2a9o_A Response regulator; ess 78.4 13 0.00045 25.2 8.2 53 45-97 33-87 (120)
149 3b1j_A Glyceraldehyde 3-phosph 78.4 7.9 0.00027 34.1 8.3 83 1-86 13-119 (339)
150 3hdg_A Uncharacterized protein 78.3 11 0.00038 26.6 7.9 71 44-116 38-112 (137)
151 4da9_A Short-chain dehydrogena 78.2 9.3 0.00032 31.7 8.4 73 1-92 41-117 (280)
152 2zyd_A 6-phosphogluconate dehy 78.2 7 0.00024 35.8 8.2 107 1-113 26-139 (480)
153 3c24_A Putative oxidoreductase 78.2 1 3.5E-05 37.8 2.4 99 1-114 23-125 (286)
154 3h5l_A Putative branched-chain 78.0 9.5 0.00033 32.9 8.7 57 44-100 206-263 (419)
155 1mb3_A Cell division response 77.8 5.4 0.00019 27.6 5.9 72 45-117 33-109 (124)
156 4gnr_A ABC transporter substra 77.7 15 0.00051 30.6 9.6 53 44-97 183-236 (353)
157 2axq_A Saccharopine dehydrogen 77.7 17 0.00059 33.2 10.6 123 1-128 34-161 (467)
158 3grc_A Sensor protein, kinase; 77.6 16 0.00055 25.8 9.0 72 44-116 37-114 (140)
159 3is3_A 17BETA-hydroxysteroid d 77.5 12 0.00041 30.7 8.8 73 1-92 30-106 (270)
160 1p6q_A CHEY2; chemotaxis, sign 77.1 8.1 0.00028 26.9 6.7 56 43-99 37-98 (129)
161 3crn_A Response regulator rece 77.1 12 0.00042 26.4 7.8 72 44-116 34-108 (132)
162 8abp_A L-arabinose-binding pro 76.9 22 0.00076 28.7 10.2 39 51-89 51-89 (306)
163 3jte_A Response regulator rece 76.7 17 0.0006 25.7 12.1 71 44-116 34-110 (143)
164 3l9w_A Glutathione-regulated p 76.5 18 0.00062 32.4 10.3 119 1-125 15-135 (413)
165 3hv2_A Response regulator/HD d 75.9 20 0.00067 25.9 10.5 79 38-116 39-120 (153)
166 2gf2_A Hibadh, 3-hydroxyisobut 75.8 9.6 0.00033 31.5 7.8 87 1-100 11-104 (296)
167 2x5j_O E4PDH, D-erythrose-4-ph 75.8 7.9 0.00027 34.1 7.5 88 1-91 13-126 (339)
168 4gbj_A 6-phosphogluconate dehy 75.7 25 0.00085 29.8 10.5 101 1-112 16-122 (297)
169 4iiu_A 3-oxoacyl-[acyl-carrier 75.7 9.7 0.00033 31.1 7.7 73 1-92 38-114 (267)
170 3h5i_A Response regulator/sens 75.3 16 0.00054 26.1 8.0 51 44-94 36-90 (140)
171 3q9s_A DNA-binding response re 75.2 19 0.00063 29.1 9.3 78 38-116 62-141 (249)
172 1xhf_A DYE resistance, aerobic 75.2 17 0.00059 24.9 9.6 54 44-97 34-89 (123)
173 2iz1_A 6-phosphogluconate dehy 75.1 8.7 0.0003 35.0 7.9 88 1-94 16-108 (474)
174 3td9_A Branched chain amino ac 75.0 19 0.00065 30.1 9.5 56 44-100 191-247 (366)
175 3ghf_A Septum site-determining 74.8 2.2 7.6E-05 32.2 3.2 52 60-112 49-103 (120)
176 2d2i_A Glyceraldehyde 3-phosph 74.7 6.9 0.00024 35.2 6.9 83 1-86 13-119 (380)
177 4e7p_A Response regulator; DNA 74.7 21 0.00072 25.7 10.1 77 39-116 48-127 (150)
178 1zh2_A KDP operon transcriptio 74.3 15 0.00052 25.0 7.5 55 45-99 33-89 (121)
179 3v2g_A 3-oxoacyl-[acyl-carrier 74.3 19 0.00064 29.7 9.2 73 1-92 43-119 (271)
180 3tjr_A Short chain dehydrogena 74.2 15 0.00053 30.7 8.8 72 1-92 43-118 (301)
181 3hut_A Putative branched-chain 74.2 16 0.00054 30.4 8.8 56 44-100 181-237 (358)
182 2qvg_A Two component response 74.1 11 0.00038 26.7 6.8 72 44-116 40-122 (143)
183 3hzh_A Chemotaxis response reg 74.0 23 0.00079 25.8 10.0 71 44-115 68-143 (157)
184 1lss_A TRK system potassium up 73.9 21 0.00073 25.3 12.1 117 1-124 15-134 (140)
185 3r0j_A Possible two component 73.8 32 0.0011 27.4 10.6 79 38-117 48-129 (250)
186 4gwg_A 6-phosphogluconate dehy 73.7 10 0.00035 35.1 8.0 90 1-93 15-107 (484)
187 3qiv_A Short-chain dehydrogena 73.6 15 0.00052 29.4 8.3 72 1-92 21-96 (253)
188 2qr3_A Two-component system re 73.6 8.6 0.0003 27.1 6.1 72 44-116 34-113 (140)
189 3g1w_A Sugar ABC transporter; 73.1 27 0.00092 28.3 9.8 39 52-90 56-94 (305)
190 3cg4_A Response regulator rece 72.9 3.8 0.00013 29.3 4.0 51 43-93 37-92 (142)
191 3n0w_A ABC branched chain amin 72.7 14 0.00049 31.2 8.3 56 44-100 184-242 (379)
192 3l21_A DHDPS, dihydrodipicolin 72.6 12 0.00042 32.2 7.8 43 68-110 35-89 (304)
193 4e3z_A Putative oxidoreductase 72.5 9.9 0.00034 31.1 7.0 73 1-92 38-114 (272)
194 3snr_A Extracellular ligand-bi 72.4 19 0.00065 29.7 8.8 58 44-102 177-235 (362)
195 1mvo_A PHOP response regulator 72.2 8.9 0.00031 27.0 5.9 50 44-93 34-86 (136)
196 1hdg_O Holo-D-glyceraldehyde-3 72.2 15 0.00051 32.2 8.4 79 1-83 11-114 (332)
197 3lkb_A Probable branched-chain 72.2 20 0.00068 30.3 9.1 55 44-99 185-240 (392)
198 3gk3_A Acetoacetyl-COA reducta 72.1 15 0.00052 29.9 8.1 73 1-92 37-113 (269)
199 1vpd_A Tartronate semialdehyde 72.1 18 0.00061 29.9 8.6 95 1-107 16-119 (299)
200 3flu_A DHDPS, dihydrodipicolin 71.8 12 0.00042 31.9 7.7 24 68-91 27-52 (297)
201 3heb_A Response regulator rece 71.8 25 0.00085 25.2 11.3 76 55-133 57-137 (152)
202 1obf_O Glyceraldehyde 3-phosph 71.8 7.2 0.00025 34.5 6.2 84 1-87 12-121 (335)
203 3b2n_A Uncharacterized protein 71.5 16 0.00056 25.7 7.2 71 44-116 36-110 (133)
204 3rot_A ABC sugar transporter, 71.5 26 0.00089 28.5 9.4 41 50-90 54-94 (297)
205 3tri_A Pyrroline-5-carboxylate 71.5 29 0.00098 29.0 9.8 90 1-101 14-110 (280)
206 1jbe_A Chemotaxis protein CHEY 71.4 22 0.00076 24.5 10.7 72 44-116 36-112 (128)
207 3oid_A Enoyl-[acyl-carrier-pro 71.3 16 0.00054 29.8 8.0 73 1-92 16-92 (258)
208 3imf_A Short chain dehydrogena 71.3 24 0.00083 28.5 9.1 72 1-92 18-93 (257)
209 2hmt_A YUAA protein; RCK, KTN, 71.1 25 0.00086 25.0 10.9 119 1-125 17-137 (144)
210 2p4q_A 6-phosphogluconate dehy 71.1 17 0.00059 33.4 8.9 88 1-94 21-114 (497)
211 3afn_B Carbonyl reductase; alp 71.0 34 0.0012 27.0 9.8 72 1-92 19-95 (258)
212 2ahr_A Putative pyrroline carb 71.0 9.9 0.00034 30.9 6.6 90 1-102 14-103 (259)
213 3o38_A Short chain dehydrogena 70.9 25 0.00084 28.4 9.0 72 1-92 35-111 (266)
214 3osu_A 3-oxoacyl-[acyl-carrier 70.9 15 0.00051 29.6 7.6 73 1-92 16-92 (246)
215 2ph3_A 3-oxoacyl-[acyl carrier 70.5 15 0.00051 29.0 7.4 73 1-92 13-90 (245)
216 1t4b_A Aspartate-semialdehyde 70.5 11 0.00037 33.4 7.2 80 2-91 14-99 (367)
217 2pgd_A 6-phosphogluconate dehy 70.4 13 0.00045 33.8 7.9 108 1-114 13-128 (482)
218 3dhn_A NAD-dependent epimerase 70.3 16 0.00055 28.4 7.6 78 1-84 16-105 (227)
219 1s8n_A Putative antiterminator 70.1 34 0.0012 26.1 10.0 51 44-95 45-97 (205)
220 3cu5_A Two component transcrip 69.9 16 0.00056 26.1 7.0 49 44-93 36-87 (141)
221 3fkr_A L-2-keto-3-deoxyarabona 69.8 11 0.00037 32.6 6.8 15 81-95 76-90 (309)
222 1kgs_A DRRD, DNA binding respo 69.8 9.8 0.00033 29.6 6.1 73 44-117 33-108 (225)
223 2yci_X 5-methyltetrahydrofolat 69.7 20 0.0007 30.4 8.5 51 61-113 81-133 (271)
224 3e96_A Dihydrodipicolinate syn 69.7 4.7 0.00016 35.0 4.5 15 69-83 33-47 (316)
225 2jba_A Phosphate regulon trans 69.6 5.9 0.0002 27.5 4.3 49 45-94 34-87 (127)
226 3tak_A DHDPS, dihydrodipicolin 69.6 14 0.00049 31.4 7.5 24 68-91 21-46 (291)
227 3sju_A Keto reductase; short-c 69.3 15 0.00053 30.3 7.5 72 1-92 36-111 (279)
228 3rqi_A Response regulator prot 69.2 20 0.00068 27.1 7.7 57 43-99 37-96 (184)
229 3edm_A Short chain dehydrogena 69.0 16 0.00053 29.8 7.4 72 1-91 20-95 (259)
230 3dr3_A N-acetyl-gamma-glutamyl 68.4 15 0.00051 32.3 7.5 86 1-92 16-109 (337)
231 2r00_A Aspartate-semialdehyde 68.4 21 0.00073 31.0 8.5 81 2-92 16-99 (336)
232 4dpp_A DHDPS 2, dihydrodipicol 68.0 14 0.00049 32.9 7.4 43 68-110 79-133 (360)
233 3qfe_A Putative dihydrodipicol 68.0 12 0.00042 32.4 6.9 16 80-95 78-93 (318)
234 2qv0_A Protein MRKE; structura 67.8 18 0.00062 25.6 6.8 51 44-94 42-94 (143)
235 3h5d_A DHDPS, dihydrodipicolin 67.8 6.3 0.00021 34.1 4.9 31 69-99 28-64 (311)
236 1tmy_A CHEY protein, TMY; chem 67.8 26 0.00088 23.8 11.7 71 45-116 35-108 (120)
237 2wkj_A N-acetylneuraminate lya 67.8 18 0.00062 31.0 7.8 23 69-91 32-56 (303)
238 1xky_A Dihydrodipicolinate syn 67.7 16 0.00053 31.4 7.4 23 69-91 33-57 (301)
239 3dqp_A Oxidoreductase YLBE; al 67.6 40 0.0014 26.1 9.4 80 1-87 12-102 (219)
240 2yxg_A DHDPS, dihydrodipicolin 67.5 19 0.00063 30.6 7.8 23 69-91 21-45 (289)
241 2h78_A Hibadh, 3-hydroxyisobut 67.5 17 0.00059 30.2 7.5 102 1-115 14-125 (302)
242 3qze_A DHDPS, dihydrodipicolin 67.4 13 0.00043 32.3 6.8 24 68-91 43-68 (314)
243 2c07_A 3-oxoacyl-(acyl-carrier 67.4 17 0.00056 30.0 7.3 72 1-92 56-131 (285)
244 2b4a_A BH3024; flavodoxin-like 67.3 9.6 0.00033 27.0 5.2 52 43-94 45-100 (138)
245 2csu_A 457AA long hypothetical 67.2 38 0.0013 30.7 10.3 71 56-128 367-448 (457)
246 4dmm_A 3-oxoacyl-[acyl-carrier 67.1 19 0.00066 29.5 7.7 74 1-93 40-117 (269)
247 4dad_A Putative pilus assembly 66.7 31 0.0011 24.4 8.9 60 56-116 66-128 (146)
248 1edo_A Beta-keto acyl carrier 66.7 15 0.00052 29.0 6.7 73 1-92 13-89 (244)
249 3dz1_A Dihydrodipicolinate syn 66.7 14 0.00046 31.9 6.8 23 69-91 29-53 (313)
250 3n53_A Response regulator rece 66.7 12 0.00042 26.5 5.7 52 44-95 33-89 (140)
251 3c3m_A Response regulator rece 66.6 11 0.00037 26.9 5.4 48 44-91 34-86 (138)
252 2j48_A Two-component sensor ki 66.5 9.8 0.00034 25.5 4.9 50 44-93 32-86 (119)
253 3l4b_C TRKA K+ channel protien 66.5 28 0.00096 27.4 8.3 117 1-122 11-129 (218)
254 3cpr_A Dihydrodipicolinate syn 66.3 19 0.00063 30.9 7.6 24 68-91 36-61 (304)
255 1usg_A Leucine-specific bindin 66.1 26 0.00089 28.7 8.3 52 44-96 180-232 (346)
256 1pgj_A 6PGDH, 6-PGDH, 6-phosph 66.1 19 0.00065 32.8 8.0 108 1-114 12-130 (478)
257 3lyl_A 3-oxoacyl-(acyl-carrier 65.9 22 0.00075 28.3 7.6 72 1-92 17-92 (247)
258 3tfo_A Putative 3-oxoacyl-(acy 65.8 15 0.00052 30.3 6.8 72 1-92 16-91 (264)
259 3pef_A 6-phosphogluconate dehy 65.8 29 0.00099 28.7 8.6 82 1-95 12-100 (287)
260 2v9d_A YAGE; dihydrodipicolini 65.8 20 0.00068 31.4 7.8 23 69-91 52-76 (343)
261 1f6y_A 5-methyltetrahydrofolat 65.7 11 0.00039 31.8 6.0 52 60-113 71-124 (262)
262 2ehh_A DHDPS, dihydrodipicolin 65.7 8 0.00027 33.0 5.1 14 81-94 68-81 (294)
263 3i4f_A 3-oxoacyl-[acyl-carrier 65.6 26 0.00089 28.2 8.1 74 1-91 19-94 (264)
264 2uvd_A 3-oxoacyl-(acyl-carrier 65.6 23 0.00077 28.4 7.7 73 1-92 16-92 (246)
265 3e48_A Putative nucleoside-dip 65.5 16 0.00053 29.8 6.7 83 1-88 12-103 (289)
266 3r1i_A Short-chain type dehydr 65.4 27 0.00093 28.8 8.3 72 1-92 44-119 (276)
267 3obb_A Probable 3-hydroxyisobu 65.3 20 0.00068 30.6 7.6 23 1-24 14-36 (300)
268 3gbv_A Putative LACI-family tr 65.3 24 0.0008 28.4 7.8 41 50-90 62-102 (304)
269 3i42_A Response regulator rece 65.3 12 0.00041 26.0 5.3 50 44-93 34-88 (127)
270 3f6c_A Positive transcription 65.2 13 0.00046 25.9 5.6 66 49-116 38-107 (134)
271 3k96_A Glycerol-3-phosphate de 65.2 16 0.00056 31.9 7.1 108 1-117 40-167 (356)
272 2ojp_A DHDPS, dihydrodipicolin 65.0 8.1 0.00028 33.0 5.0 15 81-95 69-83 (292)
273 1a04_A Nitrate/nitrite respons 64.8 33 0.0011 26.3 8.3 73 44-117 38-113 (215)
274 2fvy_A D-galactose-binding per 64.7 54 0.0018 26.3 11.9 39 52-90 54-92 (309)
275 3kcn_A Adenylate cyclase homol 64.5 36 0.0012 24.4 9.7 62 43-104 33-98 (151)
276 3jy6_A Transcriptional regulat 64.4 52 0.0018 26.2 11.2 38 50-90 56-93 (276)
277 2r8w_A AGR_C_1641P; APC7498, d 64.4 20 0.00067 31.3 7.5 24 68-91 54-79 (332)
278 2h9a_B CO dehydrogenase/acetyl 64.3 31 0.0011 30.0 8.7 68 61-130 125-196 (310)
279 3a5f_A Dihydrodipicolinate syn 64.1 18 0.00061 30.7 7.0 23 69-91 22-46 (291)
280 3u5t_A 3-oxoacyl-[acyl-carrier 64.1 15 0.00051 30.2 6.4 73 1-92 39-115 (267)
281 1o5k_A DHDPS, dihydrodipicolin 64.0 19 0.00065 30.9 7.2 14 81-94 80-93 (306)
282 3ezl_A Acetoacetyl-COA reducta 63.6 23 0.0008 28.3 7.4 73 1-92 25-101 (256)
283 2o1e_A YCDH; alpha-beta protei 63.6 14 0.00049 31.8 6.4 43 68-110 225-267 (312)
284 2o23_A HADH2 protein; HSD17B10 63.5 29 0.001 27.7 8.0 71 1-92 24-96 (265)
285 3eul_A Possible nitrate/nitrit 63.5 38 0.0013 24.2 9.8 72 44-116 48-122 (152)
286 3tzq_B Short-chain type dehydr 63.4 26 0.00088 28.7 7.7 72 1-93 23-96 (271)
287 2x7x_A Sensor protein; transfe 63.4 62 0.0021 26.6 11.0 38 52-89 57-94 (325)
288 3si9_A DHDPS, dihydrodipicolin 63.4 17 0.00057 31.5 6.8 12 82-93 91-102 (315)
289 1dz3_A Stage 0 sporulation pro 63.4 23 0.0008 24.6 6.6 48 45-93 36-87 (130)
290 2rir_A Dipicolinate synthase, 63.3 7.7 0.00026 32.8 4.5 107 1-118 168-274 (300)
291 1zgz_A Torcad operon transcrip 63.2 32 0.0011 23.4 10.2 53 45-97 34-88 (122)
292 2ep5_A 350AA long hypothetical 63.1 16 0.00054 32.0 6.6 83 1-92 16-111 (350)
293 3na8_A Putative dihydrodipicol 62.9 14 0.00047 32.0 6.1 23 69-91 45-69 (315)
294 1yb4_A Tartronic semialdehyde 62.9 16 0.00056 30.0 6.4 79 1-92 14-99 (295)
295 3daq_A DHDPS, dihydrodipicolin 62.9 21 0.0007 30.4 7.2 12 82-93 71-82 (292)
296 2lpm_A Two-component response 62.8 4.7 0.00016 30.1 2.8 52 43-95 39-91 (123)
297 3rih_A Short chain dehydrogena 62.6 62 0.0021 26.9 10.1 72 1-92 53-129 (293)
298 1hdo_A Biliverdin IX beta redu 62.5 21 0.00073 27.0 6.6 82 1-87 15-107 (206)
299 1f6k_A N-acetylneuraminate lya 62.4 21 0.00072 30.3 7.2 23 69-91 24-49 (293)
300 3m5v_A DHDPS, dihydrodipicolin 62.2 18 0.00063 30.9 6.8 12 82-93 77-88 (301)
301 2nuw_A 2-keto-3-deoxygluconate 62.2 10 0.00034 32.3 5.1 35 68-102 19-59 (288)
302 2raf_A Putative dinucleotide-b 62.1 21 0.00073 28.3 6.8 62 1-93 30-94 (209)
303 2jk1_A HUPR, hydrogenase trans 61.7 39 0.0013 23.7 7.8 53 44-96 31-86 (139)
304 3cps_A Glyceraldehyde 3-phosph 61.7 15 0.00052 32.6 6.3 84 1-87 28-135 (354)
305 3ucx_A Short chain dehydrogena 61.7 23 0.00079 28.8 7.1 72 1-92 23-98 (264)
306 3h7a_A Short chain dehydrogena 61.6 22 0.00074 28.9 6.9 72 1-92 19-93 (252)
307 1yio_A Response regulatory pro 61.3 23 0.0008 27.0 6.7 48 44-91 35-85 (208)
308 2uyy_A N-PAC protein; long-cha 61.2 24 0.00084 29.5 7.3 80 1-92 41-127 (316)
309 2rfg_A Dihydrodipicolinate syn 61.2 17 0.00057 31.1 6.3 61 67-127 19-94 (297)
310 2rcy_A Pyrroline carboxylate r 61.1 22 0.00076 28.7 6.9 83 1-101 15-103 (262)
311 3a10_A Response regulator; pho 61.1 13 0.00043 25.3 4.6 47 44-90 32-81 (116)
312 3ipc_A ABC transporter, substr 60.8 32 0.0011 28.4 8.0 56 44-100 180-236 (356)
313 3rkr_A Short chain oxidoreduct 60.8 39 0.0013 27.3 8.3 72 1-92 41-116 (262)
314 4fn4_A Short chain dehydrogena 60.7 27 0.00093 29.1 7.4 71 1-91 19-93 (254)
315 2r25_B Osmosensing histidine p 60.6 40 0.0014 23.7 7.5 59 56-116 51-114 (133)
316 3s5o_A 4-hydroxy-2-oxoglutarat 60.6 16 0.00056 31.3 6.2 12 82-93 83-94 (307)
317 4e6p_A Probable sorbitol dehyd 60.6 27 0.00091 28.2 7.3 71 1-92 20-92 (259)
318 3cmc_O GAPDH, glyceraldehyde-3 60.6 21 0.00072 31.3 7.0 80 1-83 12-113 (334)
319 3op4_A 3-oxoacyl-[acyl-carrier 60.6 28 0.00096 28.0 7.4 71 1-92 21-93 (248)
320 3awd_A GOX2181, putative polyo 60.4 26 0.0009 27.9 7.1 72 1-92 25-100 (260)
321 1pq4_A Periplasmic binding pro 60.3 19 0.00064 30.6 6.4 48 67-114 222-269 (291)
322 2gwr_A DNA-binding response re 60.2 13 0.00043 29.5 5.1 71 45-116 37-109 (238)
323 3n74_A 3-ketoacyl-(acyl-carrie 60.1 16 0.00055 29.4 5.8 71 1-92 21-93 (261)
324 3f4w_A Putative hexulose 6 pho 60.1 21 0.00072 28.1 6.4 33 56-88 76-109 (211)
325 2b4r_O Glyceraldehyde-3-phosph 60.1 16 0.00053 32.5 6.0 84 1-87 22-129 (345)
326 1i36_A Conserved hypothetical 60.0 43 0.0015 27.0 8.5 88 1-102 11-100 (264)
327 2r6j_A Eugenol synthase 1; phe 59.9 66 0.0022 26.4 9.7 83 1-87 23-112 (318)
328 4imr_A 3-oxoacyl-(acyl-carrier 59.7 69 0.0023 26.2 9.8 72 1-92 45-119 (275)
329 4ffl_A PYLC; amino acid, biosy 59.6 66 0.0023 27.2 10.0 78 2-84 13-90 (363)
330 2ioy_A Periplasmic sugar-bindi 59.5 65 0.0022 25.7 9.5 36 53-88 53-88 (283)
331 3uug_A Multiple sugar-binding 59.4 22 0.00075 29.2 6.6 35 55-89 57-91 (330)
332 3qha_A Putative oxidoreductase 59.2 62 0.0021 26.9 9.6 80 1-92 26-108 (296)
333 1yb1_A 17-beta-hydroxysteroid 59.1 29 0.00099 28.2 7.3 72 1-92 43-118 (272)
334 4huj_A Uncharacterized protein 59.0 15 0.00051 29.4 5.4 82 1-92 34-116 (220)
335 3mm4_A Histidine kinase homolo 58.9 60 0.0021 25.0 10.8 75 40-115 89-184 (206)
336 3v8b_A Putative dehydrogenase, 58.7 31 0.0011 28.5 7.5 72 1-92 40-115 (283)
337 1geg_A Acetoin reductase; SDR 58.7 29 0.00099 27.9 7.1 72 1-92 14-89 (256)
338 4fc7_A Peroxisomal 2,4-dienoyl 58.7 41 0.0014 27.5 8.2 72 1-92 39-115 (277)
339 1fmc_A 7 alpha-hydroxysteroid 58.6 31 0.0011 27.2 7.3 72 1-92 23-98 (255)
340 3l6e_A Oxidoreductase, short-c 58.6 35 0.0012 27.2 7.6 71 1-92 15-87 (235)
341 3ks9_A Mglur1, metabotropic gl 58.4 45 0.0016 29.9 9.0 49 45-94 242-295 (496)
342 4a2c_A Galactitol-1-phosphate 58.4 15 0.00052 31.0 5.5 21 2-22 173-193 (346)
343 3pgx_A Carveol dehydrogenase; 58.4 68 0.0023 26.1 9.5 85 1-92 27-115 (280)
344 3ioy_A Short-chain dehydrogena 58.3 56 0.0019 27.5 9.2 72 1-92 20-97 (319)
345 3ftp_A 3-oxoacyl-[acyl-carrier 58.1 26 0.00088 28.8 6.8 72 1-92 40-115 (270)
346 1i3c_A Response regulator RCP1 58.1 48 0.0016 23.7 11.3 59 44-102 41-111 (149)
347 3o26_A Salutaridine reductase; 58.0 29 0.001 28.2 7.1 73 1-93 24-102 (311)
348 2fn9_A Ribose ABC transporter, 57.9 70 0.0024 25.5 10.1 38 51-88 52-89 (290)
349 3i45_A Twin-arginine transloca 57.8 36 0.0012 28.7 7.9 57 44-101 186-245 (387)
350 4a7p_A UDP-glucose dehydrogena 57.6 21 0.00072 32.4 6.6 109 1-118 19-164 (446)
351 3gaf_A 7-alpha-hydroxysteroid 57.6 25 0.00085 28.5 6.6 72 1-92 24-99 (256)
352 1dcf_A ETR1 protein; beta-alph 57.5 45 0.0016 23.2 7.6 71 44-116 38-116 (136)
353 4iin_A 3-ketoacyl-acyl carrier 57.5 34 0.0012 27.8 7.5 73 1-92 41-117 (271)
354 1zem_A Xylitol dehydrogenase; 57.4 36 0.0012 27.5 7.5 72 1-92 19-94 (262)
355 2hmc_A AGR_L_411P, dihydrodipi 57.4 28 0.00095 30.6 7.2 24 72-95 82-105 (344)
356 3oig_A Enoyl-[acyl-carrier-pro 57.2 31 0.0011 27.8 7.1 75 1-92 21-97 (266)
357 3eb2_A Putative dihydrodipicol 57.2 16 0.00055 31.3 5.5 23 69-91 25-49 (300)
358 3vk5_A MOEO5; TIM barrel, tran 57.0 37 0.0013 29.4 7.7 50 61-110 43-101 (286)
359 2jah_A Clavulanic acid dehydro 57.0 32 0.0011 27.6 7.1 72 1-92 19-94 (247)
360 2ozp_A N-acetyl-gamma-glutamyl 56.8 23 0.00078 30.9 6.5 80 1-92 16-102 (345)
361 4f06_A Extracellular ligand-bi 56.8 76 0.0026 26.7 9.8 59 44-103 181-245 (371)
362 3v2h_A D-beta-hydroxybutyrate 56.8 52 0.0018 27.0 8.5 73 1-92 37-114 (281)
363 2r91_A 2-keto-3-deoxy-(6-phosp 56.8 10 0.00034 32.3 4.1 32 68-99 18-55 (286)
364 1w3i_A EDA, 2-keto-3-deoxy glu 56.8 11 0.00037 32.2 4.3 33 68-100 19-57 (293)
365 4g81_D Putative hexonate dehyd 56.6 23 0.00079 29.6 6.3 72 1-92 21-96 (255)
366 2izz_A Pyrroline-5-carboxylate 56.6 63 0.0022 27.3 9.2 91 1-102 33-131 (322)
367 3b4u_A Dihydrodipicolinate syn 56.5 11 0.00038 32.2 4.3 23 69-91 24-48 (294)
368 2rhc_B Actinorhodin polyketide 56.5 33 0.0011 28.1 7.2 72 1-92 34-109 (277)
369 1wma_A Carbonyl reductase [NAD 56.3 43 0.0015 26.5 7.8 72 1-92 16-92 (276)
370 3nrc_A Enoyl-[acyl-carrier-pro 56.3 80 0.0027 25.7 9.9 70 1-92 40-113 (280)
371 1gee_A Glucose 1-dehydrogenase 56.3 34 0.0012 27.2 7.2 72 1-92 19-95 (261)
372 4fs3_A Enoyl-[acyl-carrier-pro 56.2 39 0.0013 27.5 7.6 75 1-92 20-96 (256)
373 3gem_A Short chain dehydrogena 56.2 23 0.00078 29.0 6.1 69 1-92 39-109 (260)
374 3tox_A Short chain dehydrogena 55.9 35 0.0012 28.2 7.4 72 1-92 20-95 (280)
375 3pwk_A Aspartate-semialdehyde 55.9 45 0.0015 29.6 8.4 110 2-123 15-138 (366)
376 4e21_A 6-phosphogluconate dehy 55.8 60 0.002 28.3 9.1 84 1-93 33-119 (358)
377 3tz6_A Aspartate-semialdehyde 55.8 51 0.0017 28.9 8.6 109 2-123 14-139 (344)
378 4dll_A 2-hydroxy-3-oxopropiona 55.6 61 0.0021 27.3 9.0 81 1-92 42-127 (320)
379 3ek2_A Enoyl-(acyl-carrier-pro 55.5 33 0.0011 27.5 6.9 73 1-92 28-102 (271)
380 1ja9_A 4HNR, 1,3,6,8-tetrahydr 55.3 27 0.00092 28.0 6.4 73 1-92 33-109 (274)
381 4ibo_A Gluconate dehydrogenase 55.3 32 0.0011 28.3 6.9 72 1-92 38-113 (271)
382 3ijr_A Oxidoreductase, short c 55.3 56 0.0019 27.0 8.5 72 1-91 59-134 (291)
383 1gz6_A Estradiol 17 beta-dehyd 55.3 42 0.0014 28.5 7.8 78 1-92 21-102 (319)
384 1e3i_A Alcohol dehydrogenase, 55.2 15 0.00051 31.7 5.0 86 1-89 207-298 (376)
385 2oqr_A Sensory transduction pr 55.2 13 0.00045 29.0 4.3 50 44-94 35-86 (230)
386 3pk0_A Short-chain dehydrogena 55.1 41 0.0014 27.2 7.5 72 1-92 22-98 (262)
387 1ys7_A Transcriptional regulat 55.1 21 0.00071 27.8 5.5 49 43-91 37-88 (233)
388 1xrs_B D-lysine 5,6-aminomutas 55.1 81 0.0028 26.7 9.5 81 45-130 168-258 (262)
389 3i09_A Periplasmic branched-ch 55.1 56 0.0019 27.3 8.6 55 44-100 182-239 (375)
390 3ksu_A 3-oxoacyl-acyl carrier 55.0 23 0.00079 28.8 6.0 75 1-92 23-101 (262)
391 3kvo_A Hydroxysteroid dehydrog 55.0 1E+02 0.0035 26.4 12.0 79 1-92 57-139 (346)
392 1spx_A Short-chain reductase f 54.9 50 0.0017 26.7 8.1 72 1-92 18-96 (278)
393 4dqx_A Probable oxidoreductase 54.8 37 0.0013 27.9 7.3 71 1-92 39-111 (277)
394 3u4g_A NAMN:DMB phosphoribosyl 54.8 4.2 0.00014 36.2 1.4 56 60-115 224-284 (337)
395 3a28_C L-2.3-butanediol dehydr 54.6 39 0.0013 27.1 7.3 74 1-92 14-91 (258)
396 2qsj_A DNA-binding response re 54.5 16 0.00056 26.3 4.5 49 44-93 36-88 (154)
397 3egc_A Putative ribose operon 54.5 48 0.0017 26.6 7.8 39 51-91 58-96 (291)
398 2yyy_A Glyceraldehyde-3-phosph 54.4 7.5 0.00026 34.2 3.0 79 1-87 13-111 (343)
399 4ej6_A Putative zinc-binding d 54.4 6.3 0.00021 34.3 2.5 86 1-90 194-286 (370)
400 2ae2_A Protein (tropinone redu 54.3 65 0.0022 25.8 8.6 72 1-92 21-97 (260)
401 2e4u_A Metabotropic glutamate 54.3 66 0.0023 29.1 9.5 49 45-94 231-281 (555)
402 1nff_A Putative oxidoreductase 54.2 39 0.0013 27.3 7.3 71 1-92 19-91 (260)
403 3tpc_A Short chain alcohol deh 54.1 32 0.0011 27.7 6.6 71 1-92 19-91 (257)
404 3svt_A Short-chain type dehydr 54.0 65 0.0022 26.2 8.7 72 1-92 23-101 (281)
405 3dii_A Short-chain dehydrogena 53.8 50 0.0017 26.4 7.8 70 1-92 14-85 (247)
406 4dyv_A Short-chain dehydrogena 53.7 27 0.00094 28.7 6.3 71 1-92 40-112 (272)
407 3on7_A Oxidoreductase, iron/as 53.6 9.6 0.00033 32.3 3.5 38 62-100 6-43 (280)
408 1dp4_A Atrial natriuretic pept 53.5 57 0.0019 27.9 8.5 49 44-94 194-246 (435)
409 3tb6_A Arabinose metabolism tr 53.5 82 0.0028 25.0 10.2 41 50-90 64-107 (298)
410 2ep7_A GAPDH, glyceraldehyde-3 53.5 13 0.00046 32.9 4.5 81 1-84 13-115 (342)
411 3p19_A BFPVVD8, putative blue 53.5 38 0.0013 27.7 7.1 32 61-92 64-97 (266)
412 1ae1_A Tropinone reductase-I; 53.3 44 0.0015 27.2 7.4 72 1-92 33-109 (273)
413 2jhf_A Alcohol dehydrogenase E 53.1 20 0.0007 30.8 5.6 87 1-90 203-295 (374)
414 2z1n_A Dehydrogenase; reductas 53.1 28 0.00096 28.1 6.1 72 1-92 19-95 (260)
415 3ai3_A NADPH-sorbose reductase 52.9 32 0.0011 27.7 6.4 72 1-92 19-95 (263)
416 2ayx_A Sensor kinase protein R 52.5 76 0.0026 25.4 8.8 77 38-116 154-234 (254)
417 3pdu_A 3-hydroxyisobutyrate de 52.4 31 0.0011 28.5 6.4 64 1-75 12-75 (287)
418 4fgs_A Probable dehydrogenase 52.3 39 0.0013 28.5 7.1 71 1-92 41-113 (273)
419 1ccw_A Protein (glutamate muta 52.0 45 0.0015 24.9 6.7 66 50-115 47-122 (137)
420 3u9l_A 3-oxoacyl-[acyl-carrier 52.0 44 0.0015 28.4 7.5 77 1-92 17-97 (324)
421 3d0c_A Dihydrodipicolinate syn 52.0 31 0.0011 29.7 6.5 63 67-131 31-105 (314)
422 2cfc_A 2-(R)-hydroxypropyl-COM 51.9 37 0.0013 26.8 6.6 72 1-92 14-90 (250)
423 4eyg_A Twin-arginine transloca 51.9 48 0.0016 27.4 7.6 54 44-98 181-239 (368)
424 1g0o_A Trihydroxynaphthalene r 51.8 49 0.0017 27.0 7.5 73 1-92 41-117 (283)
425 2wm3_A NMRA-like family domain 51.6 94 0.0032 25.1 9.4 86 1-90 17-114 (299)
426 3sc4_A Short chain dehydrogena 51.5 79 0.0027 25.9 8.8 79 1-92 21-103 (285)
427 3a1s_A Iron(II) transport prot 51.4 43 0.0015 27.4 7.1 73 57-129 83-165 (258)
428 3ak4_A NADH-dependent quinucli 51.2 40 0.0014 27.1 6.8 71 1-92 24-96 (263)
429 1iy8_A Levodione reductase; ox 51.1 35 0.0012 27.6 6.5 72 1-92 25-102 (267)
430 3sm9_A Mglur3, metabotropic gl 51.1 31 0.0011 30.9 6.6 49 45-94 230-280 (479)
431 3d02_A Putative LACI-type tran 51.0 93 0.0032 24.8 9.2 39 51-89 55-93 (303)
432 3t7c_A Carveol dehydrogenase; 51.0 50 0.0017 27.3 7.6 84 1-92 40-127 (299)
433 2q5c_A NTRC family transcripti 50.9 67 0.0023 25.5 8.0 58 58-120 118-177 (196)
434 3l77_A Short-chain alcohol deh 50.8 40 0.0014 26.5 6.6 72 1-92 14-90 (235)
435 2h3h_A Sugar ABC transporter, 50.6 61 0.0021 26.4 7.9 36 54-89 54-89 (313)
436 2zat_A Dehydrogenase/reductase 50.6 47 0.0016 26.6 7.1 72 1-92 26-101 (260)
437 3h9e_O Glyceraldehyde-3-phosph 50.5 50 0.0017 29.3 7.7 86 1-89 18-126 (346)
438 2y5s_A DHPS, dihydropteroate s 50.4 34 0.0012 29.5 6.5 49 61-113 100-148 (294)
439 1jub_A Dihydroorotate dehydrog 50.4 64 0.0022 27.1 8.2 18 67-84 104-121 (311)
440 1xq1_A Putative tropinone redu 50.3 52 0.0018 26.3 7.3 72 1-92 26-102 (266)
441 2pju_A Propionate catabolism o 50.2 1E+02 0.0036 25.2 10.1 55 58-117 130-185 (225)
442 1yxm_A Pecra, peroxisomal tran 50.1 86 0.0029 25.5 8.8 72 1-92 30-110 (303)
443 3i6i_A Putative leucoanthocyan 50.0 92 0.0031 25.9 9.1 20 1-20 22-41 (346)
444 4dup_A Quinone oxidoreductase; 50.0 8.3 0.00028 33.2 2.5 19 1-19 180-198 (353)
445 3gt0_A Pyrroline-5-carboxylate 49.9 21 0.00072 28.9 4.9 90 1-101 13-109 (247)
446 3i8s_A Ferrous iron transport 49.9 65 0.0022 26.5 8.0 74 56-132 84-167 (274)
447 3rxy_A NIF3 protein; structura 49.8 34 0.0012 29.5 6.3 73 61-146 198-275 (278)
448 3s55_A Putative short-chain de 49.8 58 0.002 26.5 7.7 84 1-92 22-109 (281)
449 3slg_A PBGP3 protein; structur 49.8 95 0.0033 25.9 9.2 86 1-90 36-141 (372)
450 3lop_A Substrate binding perip 49.7 54 0.0018 27.3 7.6 54 44-98 183-237 (364)
451 1tx2_A DHPS, dihydropteroate s 49.7 29 0.00098 30.0 5.9 49 61-113 118-167 (297)
452 1xkq_A Short-chain reductase f 49.5 51 0.0017 26.9 7.3 72 1-92 18-96 (280)
453 3gvc_A Oxidoreductase, probabl 49.4 44 0.0015 27.5 6.9 71 1-92 41-113 (277)
454 3m1a_A Putative dehydrogenase; 49.4 41 0.0014 27.3 6.6 71 1-92 17-89 (281)
455 3o74_A Fructose transport syst 49.3 62 0.0021 25.4 7.6 40 51-91 52-91 (272)
456 3uve_A Carveol dehydrogenase ( 49.3 54 0.0019 26.7 7.4 88 1-92 23-114 (286)
457 2ehd_A Oxidoreductase, oxidore 49.3 45 0.0015 26.1 6.7 70 1-92 17-88 (234)
458 3ksm_A ABC-type sugar transpor 49.2 52 0.0018 25.9 7.1 39 52-90 53-92 (276)
459 3ew7_A LMO0794 protein; Q8Y8U8 49.2 76 0.0026 24.1 7.9 76 1-84 12-96 (221)
460 1xhl_A Short-chain dehydrogena 48.9 45 0.0015 27.7 7.0 72 1-92 38-116 (297)
461 2wqp_A Polysialic acid capsule 48.8 20 0.00069 31.8 4.9 75 61-148 151-237 (349)
462 2nu8_B SCS-beta, succinyl-COA 48.7 48 0.0016 29.5 7.4 57 66-122 323-382 (388)
463 3sc6_A DTDP-4-dehydrorhamnose 48.5 15 0.0005 29.8 3.7 72 1-90 17-106 (287)
464 1gr0_A Inositol-3-phosphate sy 48.4 48 0.0016 29.7 7.2 73 54-128 135-214 (367)
465 1cdo_A Alcohol dehydrogenase; 48.3 22 0.00074 30.6 5.0 87 1-90 204-296 (374)
466 4evq_A Putative ABC transporte 48.3 34 0.0012 28.5 6.1 48 44-93 193-241 (375)
467 1w6u_A 2,4-dienoyl-COA reducta 48.1 75 0.0026 25.8 8.1 72 1-92 38-114 (302)
468 3epr_A Hydrolase, haloacid deh 48.0 36 0.0012 27.3 6.1 50 70-119 25-80 (264)
469 1hdc_A 3-alpha, 20 beta-hydrox 48.0 36 0.0012 27.4 6.0 71 1-92 17-89 (254)
470 3rwb_A TPLDH, pyridoxal 4-dehy 48.0 46 0.0016 26.7 6.7 71 1-92 18-90 (247)
471 1pqw_A Polyketide synthase; ro 48.0 32 0.0011 26.4 5.5 31 61-91 86-116 (198)
472 2c0c_A Zinc binding alcohol de 47.9 12 0.00041 32.3 3.2 86 1-89 176-262 (362)
473 3cxt_A Dehydrogenase with diff 47.8 55 0.0019 27.1 7.3 72 1-92 46-121 (291)
474 3to5_A CHEY homolog; alpha(5)b 47.5 83 0.0028 23.3 9.4 72 44-116 44-120 (134)
475 1qyc_A Phenylcoumaran benzylic 47.5 82 0.0028 25.4 8.2 19 1-19 16-34 (308)
476 2ioj_A Hypothetical protein AF 47.4 16 0.00054 27.3 3.5 39 77-115 68-108 (139)
477 3pxx_A Carveol dehydrogenase; 47.4 54 0.0018 26.5 7.1 84 1-92 22-109 (287)
478 2lnd_A De novo designed protei 47.4 24 0.00083 25.3 4.2 58 57-114 26-88 (112)
479 3c1o_A Eugenol synthase; pheny 47.4 82 0.0028 25.7 8.3 83 1-87 16-110 (321)
480 3qm3_A Fructose-bisphosphate a 47.3 36 0.0012 30.3 6.3 122 43-170 17-167 (357)
481 4egf_A L-xylulose reductase; s 47.3 38 0.0013 27.5 6.1 72 1-92 32-108 (266)
482 1w25_A Stalked-cell differenti 47.2 64 0.0022 28.1 8.0 56 44-99 32-92 (459)
483 3pym_A GAPDH 3, glyceraldehyde 47.1 64 0.0022 28.4 7.8 81 1-84 12-115 (332)
484 3pzr_A Aspartate-semialdehyde 47.0 1.5E+02 0.0052 26.1 12.0 80 2-91 13-98 (370)
485 3bre_A Probable two-component 46.9 61 0.0021 27.0 7.5 58 37-95 43-105 (358)
486 1e6u_A GDP-fucose synthetase; 46.9 57 0.0019 26.6 7.2 70 1-87 15-103 (321)
487 1wly_A CAAR, 2-haloacrylate re 46.8 41 0.0014 28.3 6.4 18 1-18 158-175 (333)
488 3doj_A AT3G25530, dehydrogenas 46.8 59 0.002 27.3 7.4 64 1-75 32-95 (310)
489 3eaf_A ABC transporter, substr 46.8 64 0.0022 27.2 7.7 47 45-92 185-234 (391)
490 1xg5_A ARPG836; short chain de 46.8 41 0.0014 27.3 6.3 72 1-92 44-121 (279)
491 3lvf_P GAPDH 1, glyceraldehyde 46.8 50 0.0017 29.2 7.0 81 1-84 15-117 (338)
492 1jw9_B Molybdopterin biosynthe 46.6 38 0.0013 27.8 6.0 32 57-89 121-153 (249)
493 3h75_A Periplasmic sugar-bindi 46.5 52 0.0018 27.4 7.0 34 56-90 61-94 (350)
494 3ged_A Short-chain dehydrogena 46.4 77 0.0026 26.2 7.9 68 1-92 14-85 (247)
495 2cvz_A Dehydrogenase, 3-hydrox 46.4 53 0.0018 26.7 6.9 100 1-114 12-117 (289)
496 2afr_A Cobalamin biosynthesis 46.4 1.1E+02 0.0038 25.6 8.8 84 58-150 133-230 (231)
497 1gud_A ALBP, D-allose-binding 46.4 1.1E+02 0.0038 24.4 9.4 38 52-89 54-91 (288)
498 2qjg_A Putative aldolase MJ040 46.3 81 0.0028 25.7 8.1 81 43-127 102-200 (273)
499 1qyd_A Pinoresinol-lariciresin 46.3 1.2E+02 0.004 24.6 9.2 19 1-19 16-34 (313)
500 2pcq_A Putative dihydrodipicol 46.2 52 0.0018 27.7 6.9 60 67-127 17-87 (283)
No 1
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=100.00 E-value=5.1e-50 Score=354.51 Aligned_cols=199 Identities=19% Similarity=0.232 Sum_probs=173.7
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCC-ccccccc-cccC---ceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTE-EESGQKV-EVCG---KEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGN 74 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~-~~~g~~~-~~~~---~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~ 74 (213)
|||.+++++. +++++||+++++.+ ...|+|+ ++.| .+++++ +|++++++ .+| |+||||.|+++.++
T Consensus 33 MGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~--~dl~~ll~-----~aD-VvIDFT~p~a~~~~ 104 (288)
T 3ijp_A 33 MGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRIT--DDPESAFS-----NTE-GILDFSQPQASVLY 104 (288)
T ss_dssp HHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCB--SCHHHHTT-----SCS-EEEECSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceee--CCHHHHhc-----CCC-EEEEcCCHHHHHHH
Confidence 8999999998 78999999999753 4567776 3433 467775 58887653 689 89999999999999
Q ss_pred HHHHHhcCCCEEEEcCCCCHHHHHHHHHccC-CcEEEccChhHHHHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCC
Q 028115 75 AELYSKVGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLD 153 (213)
Q Consensus 75 ~~~~~~~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~N~SlGv~ll~~l~~~aa~~l~~~~~~~dieI~E~HH~~K~D 153 (213)
+++|+++|+|+|+|||||+++++++|.++++ +|+|||||||+|||+|+++++++|++|+ ++||+||+|+||++|+|
T Consensus 105 ~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~~~~~~~a~N~SiGv~ll~~l~~~aa~~l~---~~~dieIiE~HH~~K~D 181 (288)
T 3ijp_A 105 ANYAAQKSLIHIIGTTGFSKTEEAQIADFAKYTTIVKSGNMSLGVNLLANLVKRAAKALD---DDFDIEIYEMHHANKVD 181 (288)
T ss_dssp HHHHHHHTCEEEECCCCCCHHHHHHHHHHHTTSEEEECSCCCHHHHHHHHHHHHHHHHSC---TTSEEEEEEEECTTCCC
T ss_pred HHHHHHcCCCEEEECCCCCHHHHHHHHHHhCcCCEEEECCCcHHHHHHHHHHHHHHHhcC---CCCCEEEEEccCCCCCC
Confidence 9999999999999999999998888888776 9999999999999999999999999997 68999999999999999
Q ss_pred c-hHHHHHHHHHH-HhcCCC------cCcccccccCCCCCcccccCccCcccCCCceEEEEEeCCCCC
Q 028115 154 T-SGTAKAVISCF-QKLGVS------FDMDQIQMIRDPKQQLEMVGVPEEHLPGHAFHMYHLTSPDQT 213 (213)
Q Consensus 154 a-SGTA~~la~~~-~~~~~~------~~~~~~~~~r~~~~~~r~g~i~geh~~G~~~htv~~~s~~~~ 213 (213)
+ ||||++|++.+ +++++. ++|+++.+.|. .+.+++-++|++.++| .|+|.|.+++++
T Consensus 182 aPSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~g~r~-~~~i~i~s~R~g~ivg--~h~V~f~~~~e~ 246 (288)
T 3ijp_A 182 SPSGTALLLGQAAAEGRNIMLKNVSVNGRSGHTGKRE-KGTIGFACSRGGTVIG--DHSITFAGENER 246 (288)
T ss_dssp SSCHHHHHHHHHHHHHTTSCHHHHEEECGGGCCSCCC-TTCEEEEEEECTTCCE--EEEEEEEETTEE
T ss_pred CCCHHHHHHHHHHHHHhCCCcccccccccccccCCcC-CCCccEEEEECCCCCE--EEEEEecCCCcE
Confidence 9 99999999966 667754 47888888886 4678888888899999 999999999864
No 2
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=100.00 E-value=1e-48 Score=343.44 Aligned_cols=199 Identities=25% Similarity=0.335 Sum_probs=173.1
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCC-ccccccc-cccCc--eeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTE-EESGQKV-EVCGK--EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA 75 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~-~~~g~~~-~~~~~--~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~ 75 (213)
|||.+++.+. +++++|++++++.+ ...|+++ .+.+. +++++ +|++++++ .+| |+||||.|+++.+++
T Consensus 19 MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~--~dl~~ll~-----~~D-VVIDfT~p~a~~~~~ 90 (272)
T 4f3y_A 19 MGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALT--DDIERVCA-----EAD-YLIDFTLPEGTLVHL 90 (272)
T ss_dssp HHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCB--CCHHHHHH-----HCS-EEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceec--CCHHHHhc-----CCC-EEEEcCCHHHHHHHH
Confidence 8999999997 78999999999753 3567776 33332 56664 58888764 479 899999999999999
Q ss_pred HHHHhcCCCEEEEcCCCCHHHHHHHHHccC-CcEEEccChhHHHHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCCc
Q 028115 76 ELYSKVGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDT 154 (213)
Q Consensus 76 ~~~~~~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~N~SlGv~ll~~l~~~aa~~l~~~~~~~dieI~E~HH~~K~Da 154 (213)
++|+++|+|+|+|||||+++++++|.++++ +|+|||||||+|+|+|++++++||++|+ ++||+||+|+||++|+|+
T Consensus 91 ~~al~~G~~vVigTTG~s~~~~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l~---~~~diei~E~HH~~K~Da 167 (272)
T 4f3y_A 91 DAALRHDVKLVIGTTGFSEPQKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQFA---QGYDIEIIEAHHRHKVDA 167 (272)
T ss_dssp HHHHHHTCEEEECCCCCCHHHHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHTS---SSCEEEEEEEECTTCCSS
T ss_pred HHHHHcCCCEEEECCCCCHHHHHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhcC---cCCCEEEEEecCCCCCCC
Confidence 999999999999999999999999988877 9999999999999999999999999996 689999999999999999
Q ss_pred -hHHHHHHHHHH-HhcCCC------cCcccccccCCCCCcccccCccCcccCCCceEEEEEeCCCCC
Q 028115 155 -SGTAKAVISCF-QKLGVS------FDMDQIQMIRDPKQQLEMVGVPEEHLPGHAFHMYHLTSPDQT 213 (213)
Q Consensus 155 -SGTA~~la~~~-~~~~~~------~~~~~~~~~r~~~~~~r~g~i~geh~~G~~~htv~~~s~~~~ 213 (213)
||||++|++.+ +++++. ++|+++.+.|. .+.+++-++|++.++| .|+|.|.+++++
T Consensus 168 PSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~g~r~-~~~i~i~s~R~g~ivg--~h~v~f~~~~e~ 231 (272)
T 4f3y_A 168 PSGTALMMGETIAAATGRSLDDCAVYGRHGVTGERD-PSTIGFSAIRGGDIVG--DHTVLFAGIGER 231 (272)
T ss_dssp SCHHHHHHHHHHHHTTTCCHHHHEEECCCSCCCSCC-TTCEEEEEEECTTCCE--EEEEEEECSSEE
T ss_pred CCHHHHHHHHHHHHHhCcccccccccccccccCCCC-CCccCEEEEECCCCce--EEEEEEcCCCcE
Confidence 99999999966 556654 57888888887 4678888899999999 999999999864
No 3
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=100.00 E-value=1.4e-47 Score=328.32 Aligned_cols=161 Identities=22% Similarity=0.297 Sum_probs=137.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
|||+|++.+.+++++||+++++... +++ ..+| |+||||+|+++++|+++|++
T Consensus 24 MG~~i~~~~~~~~~elv~~id~~~~-------------------------~~l--~~~D-VvIDFT~P~a~~~~~~~~~~ 75 (228)
T 1vm6_A 24 MGQEIQKVFSEKGHELVLKVDVNGV-------------------------EEL--DSPD-VVIDFSSPEALPKTVDLCKK 75 (228)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTEE-------------------------EEC--SCCS-EEEECSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEEcCCCc-------------------------ccc--cCCC-EEEECCCHHHHHHHHHHHHH
Confidence 8999998766899999999875420 011 2578 99999999999999999999
Q ss_pred cCCCEEEEcCCCCHHHHHHHHHccC-CcEEEccChhHHHHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCCc-hHHH
Q 028115 81 VGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDT-SGTA 158 (213)
Q Consensus 81 ~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~N~SlGv~ll~~l~~~aa~~l~~~~~~~dieI~E~HH~~K~Da-SGTA 158 (213)
+|+|+|||||||++++++.+.+.++ +|+|+|||||+|||+|+++++++|++| ++||+||+|+||++|+|+ ||||
T Consensus 76 ~g~~~ViGTTG~~~~~~~~l~~~a~~~~vv~apNfSlGvnll~~l~~~aA~~l----~~ydiEIiE~HH~~K~DAPSGTA 151 (228)
T 1vm6_A 76 YRAGLVLGTTALKEEHLQMLRELSKEVPVVQAYNFSIGINVLKRFLSELVKVL----EDWDVEIVETHHRFKKDAPSGTA 151 (228)
T ss_dssp HTCEEEECCCSCCHHHHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHT----TTSEEEEEEEECTTCCCSSCHHH
T ss_pred cCCCEEEeCCCCCHHHHHHHHHHHhhCCEEEeccccHHHHHHHHHHHHHHHhc----CCCCEEEEEcCCCCCCCCCCHHH
Confidence 9999999999999999888888766 999999999999999999999999998 589999999999999999 9999
Q ss_pred HHHHHHHHhcCCCcCcccccccCCCCCcccccCccCcccCCCceEEEEEeCCCCC
Q 028115 159 KAVISCFQKLGVSFDMDQIQMIRDPKQQLEMVGVPEEHLPGHAFHMYHLTSPDQT 213 (213)
Q Consensus 159 ~~la~~~~~~~~~~~~~~~~~~r~~~~~~r~g~i~geh~~G~~~htv~~~s~~~~ 213 (213)
++|++.+. ..+++-++|+..++| .|||.|.+++++
T Consensus 152 l~lae~i~------------------~~I~i~svR~g~ivg--~H~V~F~~~gE~ 186 (228)
T 1vm6_A 152 ILLESALG------------------KSVPIHSLRVGGVPG--DHVVVFGNIGET 186 (228)
T ss_dssp HHHHHHTT------------------SCCCEEEEECTTCCC--EEEEEEECSSEE
T ss_pred HHHHHhcc------------------cCCCEEEEECCCCcE--EEEEEEeCCCcE
Confidence 99999871 123333444456666 799999999864
No 4
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=1.7e-46 Score=324.69 Aligned_cols=186 Identities=20% Similarity=0.278 Sum_probs=158.0
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+.+++++. .++ +|++++++.+.. ..+++++ +|+++++ ++| |+||||.|+++.++++ +
T Consensus 14 MG~~i~~~l~~~~~-eLva~~d~~~~~--------~~gv~v~--~dl~~l~------~~D-VvIDft~p~a~~~~~~--l 73 (243)
T 3qy9_A 14 MNQRVARLAEEKGH-EIVGVIENTPKA--------TTPYQQY--QHIADVK------GAD-VAIDFSNPNLLFPLLD--E 73 (243)
T ss_dssp HHHHHHHHHHHTTC-EEEEEECSSCC----------CCSCBC--SCTTTCT------TCS-EEEECSCHHHHHHHHT--S
T ss_pred HHHHHHHHHHhCCC-EEEEEEecCccc--------cCCCcee--CCHHHHh------CCC-EEEEeCChHHHHHHHH--H
Confidence 8999999998 566 999999865421 1234453 3555432 588 8999999999999998 8
Q ss_pred hcCCCEEEEcCCCCHHHHHHHHHccC-CcEEEccChhHHHHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCCc-hHH
Q 028115 80 KVGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDT-SGT 157 (213)
Q Consensus 80 ~~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~N~SlGv~ll~~l~~~aa~~l~~~~~~~dieI~E~HH~~K~Da-SGT 157 (213)
++|+|+|+|||||++++++++.++++ +|+|||||||+|||||+++++++|++|+ +||+||+|+||++|+|| |||
T Consensus 74 ~~g~~vVigTTG~s~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l~----~~dieI~E~HH~~K~DaPSGT 149 (243)
T 3qy9_A 74 DFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLD----DFDIELTEAHHNKKVDAPSGT 149 (243)
T ss_dssp CCCCCEEECCCSSHHHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHTT----TSEEEEEEEECTTCCSSSCHH
T ss_pred hcCCceEeCCCCCCHHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhcC----CCCEEEEEcCCCCCCCCCCHH
Confidence 99999999999999999999988877 9999999999999999999999999995 49999999999999999 999
Q ss_pred HHHHHHHHHhcCC----CcCcccccccCCCCCcccccCccCcccCCCceEEEEEeCCCCC
Q 028115 158 AKAVISCFQKLGV----SFDMDQIQMIRDPKQQLEMVGVPEEHLPGHAFHMYHLTSPDQT 213 (213)
Q Consensus 158 A~~la~~~~~~~~----~~~~~~~~~~r~~~~~~r~g~i~geh~~G~~~htv~~~s~~~~ 213 (213)
|++|++.+++++. .++|++..+.|. .+.+++-++|++.++| .|+|.|.+++++
T Consensus 150 A~~la~~i~~~~~~~~~~~~r~~~~~~r~-~~~i~i~s~R~g~ivg--~h~v~f~~~~e~ 206 (243)
T 3qy9_A 150 LEKLYDVIVSLKENVTPVYDRHELNEKRQ-PQDIGIHSIRGGTIVG--EHEVLFAGTDET 206 (243)
T ss_dssp HHHHHHHHHHHSTTCEEECCCTTTCCCCC-TTEEEEEEEECTTCCE--EEEEEEEETTEE
T ss_pred HHHHHHHHHhcCcccccccccccccCCcc-CCcceEEEEECCCCcE--EEEEEEcCCCcE
Confidence 9999998766554 357788777885 5678888888888999 999999999864
No 5
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=100.00 E-value=2.5e-44 Score=315.15 Aligned_cols=198 Identities=21% Similarity=0.264 Sum_probs=166.6
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCC-ccccccc-cc---cCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTE-EESGQKV-EV---CGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGN 74 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~-~~~g~~~-~~---~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~ 74 (213)
||+.+++.+. .++++|+++++..+ ...|+++ .. ...+++++ +|++++++ .+| ||||||.|++..++
T Consensus 17 mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~--~dl~~~l~-----~~D-vVIDft~p~~~~~~ 88 (273)
T 1dih_A 17 MGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQ--SSLDAVKD-----DFD-VFIDFTRPEGTLNH 88 (273)
T ss_dssp HHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEE--SCSTTTTT-----SCS-EEEECSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceec--CCHHHHhc-----CCC-EEEEcCChHHHHHH
Confidence 8999999887 78999999998654 2335554 22 22245553 46665442 578 89999999999999
Q ss_pred HHHHHhcCCCEEEEcCCCCHHHHHHHHHccC-CcEEEccChhHHHHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCC
Q 028115 75 AELYSKVGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLD 153 (213)
Q Consensus 75 ~~~~~~~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~N~SlGv~ll~~l~~~aa~~l~~~~~~~dieI~E~HH~~K~D 153 (213)
+++|+++|+++|+|||||++++.+++.+.++ +|+++|||||+|+|+|+++++.++++|+ ++||+||+|+||++|+|
T Consensus 89 ~~~a~~~G~~vVigTtG~~~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~---~~~dieiiE~Hh~~K~D 165 (273)
T 1dih_A 89 LAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMG---DYTDIEIIEAHHRHKVD 165 (273)
T ss_dssp HHHHHHTTCEEEECCCCCCHHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHT---TTSEEEEEEEECTTCCS
T ss_pred HHHHHhCCCCEEEECCCCCHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcC---CCCCEEEEEeecCCCCC
Confidence 9999999999999999999999888888766 9999999999999999999999999997 78999999999999999
Q ss_pred c-hHHHHHHHHHH-HhcCCC------cCcccccccCCCCCcccccCccCcccCCCceEEEEEeCCCC
Q 028115 154 T-SGTAKAVISCF-QKLGVS------FDMDQIQMIRDPKQQLEMVGVPEEHLPGHAFHMYHLTSPDQ 212 (213)
Q Consensus 154 a-SGTA~~la~~~-~~~~~~------~~~~~~~~~r~~~~~~r~g~i~geh~~G~~~htv~~~s~~~ 212 (213)
+ ||||+++++.+ +.++.. ++|++..++|. .+.+++-++|+..++| .|+|.|.++++
T Consensus 166 aPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~-~~~i~i~s~R~g~vvg--~h~v~f~~~ge 229 (273)
T 1dih_A 166 APSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERV-PGTIGFATVRAGDIVG--EHTAMFADIGE 229 (273)
T ss_dssp SSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCC-TTCEEEEEEECTTCCE--EEEEEEEETTE
T ss_pred CCCHHHHHHHHHHHHhhCCCccccccccccCccCCCC-CCcceEEEEeCCCCCc--cEEEEEcCCCc
Confidence 9 99999999976 456653 46777777775 4678888899999999 99999999875
No 6
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=100.00 E-value=4.8e-43 Score=303.37 Aligned_cols=180 Identities=22% Similarity=0.272 Sum_probs=148.6
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+.+++.+. .++++|+++++.. +|+++++. ..+| |+||||+|+++.+++++|+
T Consensus 12 mG~~i~~~~~~~~~~elva~~d~~--------------------~dl~~~~~----~~~D-vvIDfT~p~a~~~~~~~a~ 66 (245)
T 1p9l_A 12 VGTTMVRAVAAADDLTLSAELDAG--------------------DPLSLLTD----GNTE-VVIDFTHPDVVMGNLEFLI 66 (245)
T ss_dssp HHHHHHHHHHHCTTCEEEEEECTT--------------------CCTHHHHH----TTCC-EEEECSCTTTHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEEccC--------------------CCHHHHhc----cCCc-EEEEccChHHHHHHHHHHH
Confidence 8999999987 6799999988743 24444332 2688 9999999999999999999
Q ss_pred hcCCCEEEEcCCCCHHHHHHH---HHcc-CCcEEEccChhHHHHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCCc-
Q 028115 80 KVGVPFVMGTTGGDRVRLHET---IENS-NVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDT- 154 (213)
Q Consensus 80 ~~g~~~ViGTTG~~~~~~~~~---~~~~-~~~~v~a~N~SlGv~ll~~l~~~aa~~l~~~~~~~dieI~E~HH~~K~Da- 154 (213)
++|+|+|+|||||++++++.+ ++++ ++|++++||||+|+|+|+++++.++++|+ |+||+|+||++|+|+
T Consensus 67 ~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~~aa~~~~------dieIiE~HH~~K~DaP 140 (245)
T 1p9l_A 67 DNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFD------SAEVIELHHPHKADAP 140 (245)
T ss_dssp HTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHHHHGGGCS------EEEEEEEECTTCCSSS
T ss_pred HcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHHHHHHHhhcC------CEEEEECcccCCCCCC
Confidence 999999999999998866555 4445 69999999999999999999999999873 999999999999999
Q ss_pred hHHHHHHHHHHHh-cC-C----CcCcccccccCCCC-CcccccCccCcccCCCceEEEEEeCCCCC
Q 028115 155 SGTAKAVISCFQK-LG-V----SFDMDQIQMIRDPK-QQLEMVGVPEEHLPGHAFHMYHLTSPDQT 213 (213)
Q Consensus 155 SGTA~~la~~~~~-~~-~----~~~~~~~~~~r~~~-~~~r~g~i~geh~~G~~~htv~~~s~~~~ 213 (213)
||||++|++.+.+ ++ + .+.|++..+.|.+. +.+++-++|++.++| .|+|.|.+++++
T Consensus 141 SGTA~~lae~i~~~~~~~~~~~~~~~~~~~g~r~~~~~~i~i~s~R~g~ivg--~h~V~f~~~~e~ 204 (245)
T 1p9l_A 141 SGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVA--HQEVLFGTEGET 204 (245)
T ss_dssp CHHHHHHHHHHHHHTTTSCCCCCCCCSCCTTTTCEEETTEEEEEEECTTCCE--EEEEEEEETTEE
T ss_pred CHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCcceEEEEECCCCCe--EEEEEEcCCCcE
Confidence 9999999997743 43 1 22344444556432 578888888999999 999999999863
No 7
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=98.97 E-value=1.2e-09 Score=95.90 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=77.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+.|+++++.+++.. .|+.+ .|++++. +++++.++ ..+| ++|+|+.|+.+.++++.|.+
T Consensus 19 ~G~~~~~~l~~~g~~~v~~VnP~~--~g~~i----~G~~vy~--sl~el~~~---~~~D-v~Ii~vp~~~~~~~~~ea~~ 86 (288)
T 1oi7_A 19 EGQFHTKQMLTYGTKIVAGVTPGK--GGMEV----LGVPVYD--TVKEAVAH---HEVD-ASIIFVPAPAAADAALEAAH 86 (288)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTTC--TTCEE----TTEEEES--SHHHHHHH---SCCS-EEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEECCCC--CCceE----CCEEeeC--CHHHHhhc---CCCC-EEEEecCHHHHHHHHHHHHH
Confidence 689999988877999888887543 12211 2567763 56665432 2689 89999999999999999999
Q ss_pred cCCC-EEEEcCCCCHHHHHHHHHccC-CcE-EEccChhHHH
Q 028115 81 VGVP-FVMGTTGGDRVRLHETIENSN-VYA-VISPQMGKQV 118 (213)
Q Consensus 81 ~g~~-~ViGTTG~~~~~~~~~~~~~~-~~~-v~a~N~SlGv 118 (213)
.|++ +|+.|+||+.++.+++.+.++ .++ ++.|| ++|+
T Consensus 87 ~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vigPN-c~Gi 126 (288)
T 1oi7_A 87 AGIPLIVLITEGIPTLDMVRAVEEIKALGSRLIGGN-CPGI 126 (288)
T ss_dssp TTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEEESS-SCEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEeCC-CCeE
Confidence 9999 888999999876555555443 444 78899 6665
No 8
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=98.97 E-value=1.1e-09 Score=96.35 Aligned_cols=105 Identities=17% Similarity=0.104 Sum_probs=77.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCC-CCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY-PNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~-~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+.+++.+.+.|+++++.+++.. .|+.+ .|++++. +++++.++ .. +| ++|+|+.|+.+.++++.|.
T Consensus 25 ~G~~~~~~l~~~g~~~v~~VnP~~--~g~~i----~G~~vy~--sl~el~~~---~~~~D-vaIi~vp~~~~~~~v~ea~ 92 (297)
T 2yv2_A 25 EGSFHAKAMLEYGTKVVAGVTPGK--GGSEV----HGVPVYD--SVKEALAE---HPEIN-TSIVFVPAPFAPDAVYEAV 92 (297)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTTC--TTCEE----TTEEEES--SHHHHHHH---CTTCC-EEEECCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEeCCCC--CCceE----CCEeeeC--CHHHHhhc---CCCCC-EEEEecCHHHHHHHHHHHH
Confidence 688899988877999888777542 12221 2567763 66665431 13 88 8999999999999999999
Q ss_pred hcCCC-EEEEcCCCCHHHHHHHHHccC-CcE-EEccChhHHH
Q 028115 80 KVGVP-FVMGTTGGDRVRLHETIENSN-VYA-VISPQMGKQV 118 (213)
Q Consensus 80 ~~g~~-~ViGTTG~~~~~~~~~~~~~~-~~~-v~a~N~SlGv 118 (213)
++|++ +|+.||||++++.+++.+.++ .++ ++.|| ++|+
T Consensus 93 ~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viGPN-c~Gi 133 (297)
T 2yv2_A 93 DAGIRLVVVITEGIPVHDTMRFVNYARQKGATIIGPN-CPGA 133 (297)
T ss_dssp HTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSS-SCEE
T ss_pred HCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEcCC-CCee
Confidence 99999 888999999876556555443 444 78899 6665
No 9
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=98.97 E-value=1.4e-09 Score=95.73 Aligned_cols=105 Identities=16% Similarity=0.118 Sum_probs=78.1
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+.|+++++.+++.. .|+.+ .|++++. +++++.++ ..+| ++|+|+.|+.+.++++.|.+
T Consensus 25 ~G~~~~~~l~~~g~~~V~~VnP~~--~g~~i----~G~~vy~--sl~el~~~---~~~D-v~ii~vp~~~~~~~v~ea~~ 92 (294)
T 2yv1_A 25 QGSFHTKKMLECGTKIVGGVTPGK--GGQNV----HGVPVFD--TVKEAVKE---TDAN-ASVIFVPAPFAKDAVFEAID 92 (294)
T ss_dssp HHHHHHHHHHHTTCCEEEEECTTC--TTCEE----TTEEEES--SHHHHHHH---HCCC-EEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEeCCCC--CCceE----CCEeeeC--CHHHHhhc---CCCC-EEEEccCHHHHHHHHHHHHH
Confidence 688999988878999887777542 12221 2567763 66665432 2689 89999999999999999999
Q ss_pred cCCC-EEEEcCCCCHHHHHHHHHccC-CcE-EEccChhHHH
Q 028115 81 VGVP-FVMGTTGGDRVRLHETIENSN-VYA-VISPQMGKQV 118 (213)
Q Consensus 81 ~g~~-~ViGTTG~~~~~~~~~~~~~~-~~~-v~a~N~SlGv 118 (213)
.|++ +|+.|+||+.++.+++.+.++ .++ ++.|| ++|+
T Consensus 93 ~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viGPN-c~Gi 132 (294)
T 2yv1_A 93 AGIELIVVITEHIPVHDTMEFVNYAEDVGVKIIGPN-TPGI 132 (294)
T ss_dssp TTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEECSS-CCEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEcCC-Ccee
Confidence 9999 788999999876666655443 444 78899 6665
No 10
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=98.61 E-value=1.9e-07 Score=81.64 Aligned_cols=101 Identities=16% Similarity=0.117 Sum_probs=73.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+.++++++.+++.. .|+.. .|++++. +++++.++ ..+| ++|+|+.|+...+.++.|.+
T Consensus 19 ~G~~~~~~l~~~g~~~V~~V~p~~--~g~~~----~G~~vy~--sl~el~~~---~~~D-~viI~tP~~~~~~~~~ea~~ 86 (288)
T 2nu8_A 19 QGTFHSEQAIAYGTKMVGGVTPGK--GGTTH----LGLPVFN--TVREAVAA---TGAT-ASVIYVPAPFCKDSILEAID 86 (288)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTTC--TTCEE----TTEEEES--SHHHHHHH---HCCC-EEEECCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEEeCCCc--cccee----CCeeccC--CHHHHhhc---CCCC-EEEEecCHHHHHHHHHHHHH
Confidence 688999988766899988887642 11111 2466763 66665532 2688 89999999999999999999
Q ss_pred cCCCE-EEEcCCCCHHHHHHHHH---ccCCcEEEccCh
Q 028115 81 VGVPF-VMGTTGGDRVRLHETIE---NSNVYAVISPQM 114 (213)
Q Consensus 81 ~g~~~-ViGTTG~~~~~~~~~~~---~~~~~~v~a~N~ 114 (213)
.|+++ |+.|+|++.++.+++.+ +.++. ++.||+
T Consensus 87 ~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~-liGPNc 123 (288)
T 2nu8_A 87 AGIKLIITITEGIPTLDMLTVKVKLDEAGVR-MIGPNT 123 (288)
T ss_dssp TTCSEEEECCCCCCHHHHHHHHHHHHHHTCE-EECSSC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHcCCE-EEecCC
Confidence 99995 88999999876555544 33443 688994
No 11
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.59 E-value=1.4e-08 Score=89.55 Aligned_cols=140 Identities=11% Similarity=0.002 Sum_probs=96.7
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+.+++.+. .++++|++++++.+.. .+. .++..+ +|+++.+ .++| |+|++|.|....+++..|+
T Consensus 14 mG~~~~~~l~~~~~~elvav~d~~~~~---~~~---~gv~~~--~d~~~ll-----~~~D-vViiatp~~~h~~~~~~al 79 (320)
T 1f06_A 14 LGRSVEKLIAKQPDMDLVGIFSRRATL---DTK---TPVFDV--ADVDKHA-----DDVD-VLFLCMGSATDIPEQAPKF 79 (320)
T ss_dssp HHHHHHHHHTTCSSEEEEEEEESSSCC---SSS---SCEEEG--GGGGGTT-----TTCS-EEEECSCTTTHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCCHHH---hhc---CCCcee--CCHHHHh-----cCCC-EEEEcCCcHHHHHHHHHHH
Confidence 7999999887 5689999998865422 111 234443 4555533 3688 8999999999999999999
Q ss_pred hcCCCEEEEcCC-CCHHHH----HHHHHccCCcEEEccChhHHHHHHHHHHHHHHHhcCCCCCC--CcEEEEeccCCCCC
Q 028115 80 KVGVPFVMGTTG-GDRVRL----HETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSG--YSLQVLESHQAGKL 152 (213)
Q Consensus 80 ~~g~~~ViGTTG-~~~~~~----~~~~~~~~~~~v~a~N~SlGv~ll~~l~~~aa~~l~~~~~~--~dieI~E~HH~~K~ 152 (213)
+.|+++|+.++. .+.++. .+++++.+.-.++..||+-|++.+.+++........ .. +..+..|.||..+.
T Consensus 80 ~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~~v~v~~~~~~p~~~~l~~~l~~~~~~~g---~~~~~~~~~~~~~~~~~~ 156 (320)
T 1f06_A 80 AQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVALVSTGWDPGMFSINRVYAAAVLAEH---QQHTFWGPGLSQGHSDAL 156 (320)
T ss_dssp TTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEECSCSBTTBHHHHHHHHHHHHCSSE---EEEEEECSEECHHHHHHH
T ss_pred HCCCEEEECCCCcCCHHHHHHHHHHHHHhCCCEEEEecCChHHHHHHHHHHhhcccccc---ceecccCCCcccccccch
Confidence 999999999985 454444 444444442334444999999888888776432111 10 12367789999998
Q ss_pred Cc-hHH
Q 028115 153 DT-SGT 157 (213)
Q Consensus 153 Da-SGT 157 (213)
+. +|+
T Consensus 157 ~~~~gi 162 (320)
T 1f06_A 157 RRIPGV 162 (320)
T ss_dssp HTSTTC
T ss_pred hhcCch
Confidence 87 775
No 12
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.35 E-value=2e-06 Score=72.11 Aligned_cols=125 Identities=17% Similarity=0.204 Sum_probs=89.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+++++|+++.++..+ ..+ . .+++++.++ ..+| ++|++|.++...+++..+++
T Consensus 11 mG~~~~~~l~~~g~~lv~v~d~~~~-~~~----------~--~~~~~~l~~----~~~D-vVv~~~~~~~~~~~~~~~l~ 72 (236)
T 2dc1_A 11 IGKFLAEWLERNGFEIAAILDVRGE-HEK----------M--VRGIDEFLQ----REMD-VAVEAASQQAVKDYAEKILK 72 (236)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSCC-CTT----------E--ESSHHHHTT----SCCS-EEEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEEecCcc-hhh----------h--cCCHHHHhc----CCCC-EEEECCCHHHHHHHHHHHHH
Confidence 7999998887889999988875531 100 1 135665442 3678 89999999999999999999
Q ss_pred cCCCEEEEcCCCC--H---HHHHHHHHccCCcEEEccChhHHHHHHHHHHHHHHHhcCCCCCCCcEEEEeccCCCCCC
Q 028115 81 VGVPFVMGTTGGD--R---VRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLD 153 (213)
Q Consensus 81 ~g~~~ViGTTG~~--~---~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~~~aa~~l~~~~~~~dieI~E~HH~~K~D 153 (213)
.|+++|+.+|++. . .++.+++++.+..+++.+|++.|+..+... . + .+ -.+.+.+.+|..+.+
T Consensus 73 ~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~~~~~~-~-~--~~------~~~~~~~~~~~~~~~ 140 (236)
T 2dc1_A 73 AGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLDAIFSA-S-E--LI------EEIVLTTRKNWRQFG 140 (236)
T ss_dssp TTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHHHHHHT-G-G--GE------EEEEEEEEEEGGGTT
T ss_pred CCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChHHHHHh-h-c--cc------cEEEEEEEcChHHcC
Confidence 9999999999974 2 355566666678889999999997654321 1 1 11 246666667766554
No 13
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=98.10 E-value=2.1e-05 Score=70.43 Aligned_cols=96 Identities=9% Similarity=0.101 Sum_probs=63.2
Q ss_pred CCCeEEEEecCCCccccccc--cccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh-cCCCEEEE
Q 028115 12 AGLELVPVSFGTEEESGQKV--EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK-VGVPFVMG 88 (213)
Q Consensus 12 ~~~elv~~~~~~~~~~g~~~--~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~-~g~~~ViG 88 (213)
++.++|+++++....-|+++ +....+++++. +++++.... -.+| ++|+|+.|..+.+.+..++. .|++.|++
T Consensus 36 ~~~~vVagV~P~~~g~~~~v~~G~~~~Gvpvy~--sv~ea~~~~--p~~D-laVi~vp~~~a~~ai~ea~~~~Gv~~vVi 110 (334)
T 3mwd_B 36 DEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFK--NMADAMRKH--PEVD-VLINFASLRSAYDSTMETMNYAQIRTIAI 110 (334)
T ss_dssp SSCSEEEEECTTSCSEEEEEEETTEEEEEEEES--SHHHHHHHC--TTCC-EEEECCCTTTHHHHHHHHTTSTTCCEEEE
T ss_pred CCceEEEEEcCCCCCccceEeccCccCCceeeC--CHHHHhhcC--CCCc-EEEEecCHHHHHHHHHHHHHHCCCCEEEE
Confidence 67999999996542112333 22234688874 676655320 1468 89999999988766555555 99998888
Q ss_pred -cCCCCHHHHHHHHH---ccCCcEEEccC
Q 028115 89 -TTGGDRVRLHETIE---NSNVYAVISPQ 113 (213)
Q Consensus 89 -TTG~~~~~~~~~~~---~~~~~~v~a~N 113 (213)
|+||.+++.+++.+ +.++ -++-||
T Consensus 111 iT~G~~e~~~~~l~~~a~~~g~-rliGPN 138 (334)
T 3mwd_B 111 IAEGIPEALTRKLIKKADQKGV-TIIGPA 138 (334)
T ss_dssp CCSCCCHHHHHHHHHHHHHHTC-EEECSS
T ss_pred ECCCCCHHHHHHHHHHHHHcCC-EEEccC
Confidence 99999765555544 3333 466676
No 14
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.57 E-value=0.00013 Score=63.67 Aligned_cols=114 Identities=12% Similarity=0.055 Sum_probs=77.6
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+.+++.+. .++++|+++.+..+..... .+++. .+.++.++ . .++| +||++|.+..-.+++..|+
T Consensus 20 iG~~~~~~l~~~~~~elvav~d~~~~~~~~------~g~~~---~~~~~l~~-~--~~~D-vViiatp~~~h~~~~~~al 86 (304)
T 3bio_A 20 IGRYALQALREAPDFEIAGIVRRNPAEVPF------ELQPF---RVVSDIEQ-L--ESVD-VALVCSPSREVERTALEIL 86 (304)
T ss_dssp HHHHHHHHHHHCTTEEEEEEECC-------------CCTTS---CEESSGGG-S--SSCC-EEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCCHHHHHH------cCCCc---CCHHHHHh-C--CCCC-EEEECCCchhhHHHHHHHH
Confidence 6888888887 5899999988865532211 11211 12222221 1 3678 8999999999999999999
Q ss_pred hcCCCEEEEcC--CCCHHHHHH---HHHccCCcEEEccChhHHHHHHHHHHHH
Q 028115 80 KVGVPFVMGTT--GGDRVRLHE---TIENSNVYAVISPQMGKQVVAFLAAMEI 127 (213)
Q Consensus 80 ~~g~~~ViGTT--G~~~~~~~~---~~~~~~~~~v~a~N~SlGv~ll~~l~~~ 127 (213)
+.|+++++-++ +.+.++.++ .+++.++.++++.+|+-|+..+.++++.
T Consensus 87 ~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~~~~p~~~~~~~~i~~ 139 (304)
T 3bio_A 87 KKGICTADSFDIHDGILALRRSLGDAAGKSGAAAVIASGWDPGSDSVVRTLMQ 139 (304)
T ss_dssp TTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHH
T ss_pred HcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHHHC
Confidence 99999998763 666655444 4455566777888999998888887654
No 15
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.53 E-value=0.00084 Score=59.03 Aligned_cols=101 Identities=17% Similarity=0.137 Sum_probs=71.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+.|++++..+++.. .|+.+ .|++++. +++++.++ ..+| ++|.|+-|+.+.+.++.|.+
T Consensus 26 ~G~~~~~~l~~~G~~~v~~VnP~~--~g~~i----~G~~vy~--sl~el~~~---~~vD-~avI~vP~~~~~~~~~e~i~ 93 (305)
T 2fp4_A 26 QGTFHSQQALEYGTNLVGGTTPGK--GGKTH----LGLPVFN--TVKEAKEQ---TGAT-ASVIYVPPPFAAAAINEAID 93 (305)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTTC--TTCEE----TTEEEES--SHHHHHHH---HCCC-EEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCcEEEEeCCCc--CcceE----CCeeeec--hHHHhhhc---CCCC-EEEEecCHHHHHHHHHHHHH
Confidence 478888887788999887776542 12111 2467763 56665432 2689 89999999999999999999
Q ss_pred cCCCE-EEEcCCCCHHH---HHHHHHcc-CCcEEEccCh
Q 028115 81 VGVPF-VMGTTGGDRVR---LHETIENS-NVYAVISPQM 114 (213)
Q Consensus 81 ~g~~~-ViGTTG~~~~~---~~~~~~~~-~~~~v~a~N~ 114 (213)
.|++. |+-|.|+..++ +.++++.. ++. ++.||.
T Consensus 94 ~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~-liGPnc 131 (305)
T 2fp4_A 94 AEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR-LIGPNC 131 (305)
T ss_dssp TTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE-EECSSS
T ss_pred CCCCEEEEECCCCChHHHHHHHHHHHhcCCcE-EEeCCC
Confidence 99998 78999998654 44455555 444 566774
No 16
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.42 E-value=0.00026 Score=62.93 Aligned_cols=146 Identities=16% Similarity=0.151 Sum_probs=93.8
Q ss_pred ChHHHHHHHH-h------CCCeEEEEecCCCccccccc------cc-cCce-eEeecCCchhHHHhhhhcCCCCEEEEEc
Q 028115 1 MGKAVIKAAD-A------AGLELVPVSFGTEEESGQKV------EV-CGKE-IQVHGLSDRESVLASVFDKYPNMIVVDY 65 (213)
Q Consensus 1 MG~~i~~~~~-~------~~~elv~~~~~~~~~~g~~~------~~-~~~~-v~i~~~~~~~~~l~~~~~~~~d~VvIDF 65 (213)
||+.+++.+. . .+++|+++.++......+++ .. ...+ ++-... |.++.+. +..+| |+||+
T Consensus 15 VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~-d~~e~l~---~~~iD-vVVe~ 89 (325)
T 3ing_A 15 VGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAF-SGPEDLM---GEAAD-LLVDC 89 (325)
T ss_dssp HHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBC-CSGGGGT---TSCCS-EEEEC
T ss_pred HHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccC-CHHHHhc---CCCCC-EEEEC
Confidence 5888888886 3 68999999886543222111 00 0001 110000 3344443 24678 89999
Q ss_pred CCh----HHHHHHHHHHHhcCCCEEEEcCCCCHH---HHHHHHHccCCcEEEccChhHHHHHHHHHHHHHHHhcCCCCCC
Q 028115 66 TVP----AAVNGNAELYSKVGVPFVMGTTGGDRV---RLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSG 138 (213)
Q Consensus 66 S~p----~~~~~~~~~~~~~g~~~ViGTTG~~~~---~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~~~aa~~l~~~~~~ 138 (213)
|.+ +...+++..|+++|+++|+...++..+ ++.+++++.++.+++-++.+-|.-++..+-+ .+ .+
T Consensus 90 T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~~~~Ea~vg~giPii~~l~~----~l----~g 161 (325)
T 3ing_A 90 TPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGGVPLFSVLDY----SI----LP 161 (325)
T ss_dssp CCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCCHHHHHH----TC----TT
T ss_pred CCCccccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCeEEEEeeecccCHHHHHHHH----Hh----hC
Confidence 965 556899999999999999998887543 5666677778889999999888777654322 22 23
Q ss_pred CcEEEEeccCCCCCCchHHHHHHHHHH
Q 028115 139 YSLQVLESHQAGKLDTSGTAKAVISCF 165 (213)
Q Consensus 139 ~dieI~E~HH~~K~DaSGTA~~la~~~ 165 (213)
-.+.=++-=. |||..-+-..+
T Consensus 162 ~~I~~i~Gi~------nGT~nyil~~m 182 (325)
T 3ing_A 162 SKVKRFRGIV------SSTINYVIRNM 182 (325)
T ss_dssp CCEEEEEEEC------CHHHHHHHHHH
T ss_pred CCeeEEEEEE------EeeeeEEeecc
Confidence 3565555422 89988776655
No 17
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.39 E-value=0.00094 Score=51.32 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=71.8
Q ss_pred hHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhc
Q 028115 2 GKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKV 81 (213)
Q Consensus 2 G~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~ 81 (213)
|..+.+.+.+.|+++.+. .+.... +. |.+.+. ++ +++- . +| +++=|+.|+.+.+.++.|.+.
T Consensus 20 g~~v~~~L~~~g~~V~pV-nP~~~~------i~--G~~~y~--sl----~dlp-~-vD-lavi~~p~~~v~~~v~e~~~~ 81 (122)
T 3ff4_A 20 AYLAAERLKSHGHEFIPV-GRKKGE------VL--GKTIIN--ER----PVIE-G-VD-TVTLYINPQNQLSEYNYILSL 81 (122)
T ss_dssp HHHHHHHHHHHTCCEEEE-SSSCSE------ET--TEECBC--SC----CCCT-T-CC-EEEECSCHHHHGGGHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEE-CCCCCc------CC--CeeccC--Ch----HHCC-C-CC-EEEEEeCHHHHHHHHHHHHhc
Confidence 667788877778887763 332111 11 234442 22 2332 3 78 788899999999999999999
Q ss_pred CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHH
Q 028115 82 GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVA 120 (213)
Q Consensus 82 g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~l 120 (213)
|++.|+=+.|+..+++.++++++++.++ +| ++|+.+
T Consensus 82 g~k~v~~~~G~~~~e~~~~a~~~Girvv--~n-C~gv~l 117 (122)
T 3ff4_A 82 KPKRVIFNPGTENEELEEILSENGIEPV--IG-CTLVML 117 (122)
T ss_dssp CCSEEEECTTCCCHHHHHHHHHTTCEEE--ES-CHHHHH
T ss_pred CCCEEEECCCCChHHHHHHHHHcCCeEE--CC-cCeEEe
Confidence 9999999999988899999998998877 56 777744
No 18
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.35 E-value=0.00088 Score=62.11 Aligned_cols=138 Identities=17% Similarity=0.283 Sum_probs=85.6
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccc-cc-c-------------------CceeEeecCCchhHHHhhhhcCCC
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKV-EV-C-------------------GKEIQVHGLSDRESVLASVFDKYP 58 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~-~~-~-------------------~~~v~i~~~~~~~~~l~~~~~~~~ 58 (213)
||+..++.+. .++++|+++.+..+....... .. + ...+.++ +|.++.+++ ...
T Consensus 34 iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~--~D~eeLL~d---~dI 108 (446)
T 3upl_A 34 MGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVT--DDNDLILSN---PLI 108 (446)
T ss_dssp HHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEE--SCHHHHHTC---TTC
T ss_pred HHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEE--CCHHHHhcC---CCC
Confidence 6888888876 689999999886553211111 00 0 0113343 578877643 357
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHhcCCCEEEEcCCCCHH---HHHHHHHccCCcEEEccChhHHHHHHHHHHHHHHHhcCC
Q 028115 59 NMIVVDYT-VPAAVNGNAELYSKVGVPFVMGTTGGDRV---RLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPG 134 (213)
Q Consensus 59 d~VvIDFS-~p~~~~~~~~~~~~~g~~~ViGTTG~~~~---~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~~~aa~~l~~ 134 (213)
| +||++| +|+.-.+++..|+++|+++|+...+.+.+ ++.++++++++.+.++. +-.-...+++++.+ +.+
T Consensus 109 D-aVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~~~~--gdqp~~~~eLv~~a-~~~-- 182 (446)
T 3upl_A 109 D-VIIDATGIPEVGAETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYSLGA--GDEPSSCMELIEFV-SAL-- 182 (446)
T ss_dssp C-EEEECSCCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEEECT--TSHHHHHHHHHHHH-HHT--
T ss_pred C-EEEEcCCChHHHHHHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeeeecC--CcchHHHHHHHHHH-HhC--
Confidence 7 899999 57777899999999999999987766543 45555555555554443 33233455665554 333
Q ss_pred CCCCCcEEEEeccCCCCC
Q 028115 135 AFSGYSLQVLESHQAGKL 152 (213)
Q Consensus 135 ~~~~~dieI~E~HH~~K~ 152 (213)
+|.+-...+-.+.+.
T Consensus 183 ---G~~~v~~Gkg~~~~~ 197 (446)
T 3upl_A 183 ---GYEVVSAGKGKNNPL 197 (446)
T ss_dssp ---TCEEEEEEEEESSCC
T ss_pred ---CCeEEEeccCcCCcc
Confidence 456666665444433
No 19
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.23 E-value=0.0028 Score=55.29 Aligned_cols=117 Identities=14% Similarity=0.083 Sum_probs=79.7
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+..++.+. .++++|+++.++.+........ ..++..+ .++++++++ ..+| +|+..|-+..-.+.+..|+
T Consensus 15 ~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~--~~g~~~~--~~~~~~l~~---~~~D-~V~i~tp~~~h~~~~~~al 86 (344)
T 3euw_A 15 IGHVHAANIAANPDLELVVIADPFIEGAQRLAE--ANGAEAV--ASPDEVFAR---DDID-GIVIGSPTSTHVDLITRAV 86 (344)
T ss_dssp HHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH--TTTCEEE--SSHHHHTTC---SCCC-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH--HcCCcee--CCHHHHhcC---CCCC-EEEEeCCchhhHHHHHHHH
Confidence 6888888877 5789999988865532211111 1124444 477776642 3678 8999999999999999999
Q ss_pred hcCCCEEEEcC-CCCHHHHHHH---HHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 80 KVGVPFVMGTT-GGDRVRLHET---IENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 80 ~~g~~~ViGTT-G~~~~~~~~~---~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
+.|+++++-.+ +.+.++.+++ +++.++.+.+..| |+-.+..+.+++
T Consensus 87 ~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i 138 (344)
T 3euw_A 87 ERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARV 138 (344)
T ss_dssp HTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHH
T ss_pred HcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHH
Confidence 99999999776 6676654444 5555577777777 445554444443
No 20
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.15 E-value=0.0052 Score=53.30 Aligned_cols=117 Identities=9% Similarity=0.008 Sum_probs=77.3
Q ss_pred ChHHHHHHHH-h-CCCeEEEEecCCCccccccccccCcee-EeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~-~-~~~elv~~~~~~~~~~g~~~~~~~~~v-~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~ 77 (213)
||+..++.+. . ++++++++.+..+........ ..++ .++ .|.++++++ ..+| +||.+|.+..-.+.+..
T Consensus 19 ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~--~~g~~~~~--~~~~~~l~~---~~~D-~V~i~tp~~~h~~~~~~ 90 (346)
T 3cea_A 19 LGERHARHLVNKIQGVKLVAACALDSNQLEWAKN--ELGVETTY--TNYKDMIDT---ENID-AIFIVAPTPFHPEMTIY 90 (346)
T ss_dssp THHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHH--TTCCSEEE--SCHHHHHTT---SCCS-EEEECSCGGGHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHH--HhCCCccc--CCHHHHhcC---CCCC-EEEEeCChHhHHHHHHH
Confidence 7888888876 4 689999988865532111011 1123 333 466766532 3578 89999999999999999
Q ss_pred HHhcCCCEEEE-cCCCCHHHHHH---HHHcc-CCcEEEccC--hhHHHHHHHHHH
Q 028115 78 YSKVGVPFVMG-TTGGDRVRLHE---TIENS-NVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 78 ~~~~g~~~ViG-TTG~~~~~~~~---~~~~~-~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
|++.|+++++. ..+.+.++.++ ++++. ++.+..+.| |+-++..+.+++
T Consensus 91 al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i 145 (346)
T 3cea_A 91 AMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIV 145 (346)
T ss_dssp HHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHH
T ss_pred HHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHH
Confidence 99999999886 35667665444 44556 666776777 444555544443
No 21
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.15 E-value=0.0058 Score=53.16 Aligned_cols=117 Identities=12% Similarity=0.077 Sum_probs=79.8
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCcee-EeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v-~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+..++.+. .++++|+++.++.+....+-... .++ ..+ .|.++++++ ..+| +|+..|-+..-.+.+..|
T Consensus 16 ~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~--~~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~a 87 (330)
T 3e9m_A 16 IVPRFVAGLRESAQAEVRGIASRRLENAQKMAKE--LAIPVAY--GSYEELCKD---ETID-IIYIPTYNQGHYSAAKLA 87 (330)
T ss_dssp THHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHH--TTCCCCB--SSHHHHHHC---TTCS-EEEECCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHH--cCCCcee--CCHHHHhcC---CCCC-EEEEcCCCHHHHHHHHHH
Confidence 7888888887 57899999888655321111111 122 122 577777653 3678 899999999999999999
Q ss_pred HhcCCCEEEEcC-CCCHHHHHH---HHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 79 ~~~g~~~ViGTT-G~~~~~~~~---~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
++.|+++++-.+ +.+.++.++ ++++.++.+..+.| |+-.+..+.+++
T Consensus 88 l~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i 140 (330)
T 3e9m_A 88 LSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATI 140 (330)
T ss_dssp HHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHH
T ss_pred HHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHH
Confidence 999999998766 667665444 45556677777777 555554444443
No 22
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.13 E-value=0.004 Score=53.66 Aligned_cols=116 Identities=17% Similarity=0.125 Sum_probs=79.2
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+..++.+. .++++++++.++.+....+ + ... ++.+ .+.++++++ ..+| +|+..|.|..-.+.+..|+
T Consensus 21 ~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~-~--~~~-~~~~--~~~~~~l~~---~~~D-~V~i~tp~~~h~~~~~~al 90 (315)
T 3c1a_A 21 WGKNYIRTIAGLPGAALVRLASSNPDNLAL-V--PPG-CVIE--SDWRSVVSA---PEVE-AVIIATPPATHAEITLAAI 90 (315)
T ss_dssp TTTTHHHHHHHCTTEEEEEEEESCHHHHTT-C--CTT-CEEE--SSTHHHHTC---TTCC-EEEEESCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEeCCHHHHHH-H--Hhh-Cccc--CCHHHHhhC---CCCC-EEEEeCChHHHHHHHHHHH
Confidence 7888888887 4789999988865432111 1 111 3333 466666532 3678 8999999999999999999
Q ss_pred hcCCCEEEE-cCCCCHHHH---HHHHHccCCcEEEccC--hhHHHHHHHHHHH
Q 028115 80 KVGVPFVMG-TTGGDRVRL---HETIENSNVYAVISPQ--MGKQVVAFLAAME 126 (213)
Q Consensus 80 ~~g~~~ViG-TTG~~~~~~---~~~~~~~~~~~v~a~N--~SlGv~ll~~l~~ 126 (213)
+.|+++++- ....+.++. .+++++.++.+..+.| |+-.+..+.++++
T Consensus 91 ~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~ 143 (315)
T 3c1a_A 91 ASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLFNPAWEALKADLT 143 (315)
T ss_dssp HTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGGCHHHHHHHHTHH
T ss_pred HCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeechhcCHHHHHHHHHHH
Confidence 999999987 455676554 4445556677777666 6666666666655
No 23
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.11 E-value=0.015 Score=50.42 Aligned_cols=117 Identities=14% Similarity=0.068 Sum_probs=79.2
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeE-eecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQ-VHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~-i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+..++.+. .++++|+++.++.+....+-.. ..+++ .+ .|.++.+++ ..+| +|+..|-+..-.+.+..|
T Consensus 16 ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~--~~~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~a 87 (329)
T 3evn_A 16 VAPRFIEGVRLAGNGEVVAVSSRTLESAQAFAN--KYHLPKAY--DKLEDMLAD---ESID-VIYVATINQDHYKVAKAA 87 (329)
T ss_dssp THHHHHHHHHHHCSEEEEEEECSCSSTTCC-----CCCCSCEE--SCHHHHHTC---TTCC-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHH--HcCCCccc--CCHHHHhcC---CCCC-EEEECCCcHHHHHHHHHH
Confidence 6888888876 6789999988865532211111 11232 33 477777642 3578 899999999999999999
Q ss_pred HhcCCCEEEEcC-CCCHHHH---HHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 79 SKVGVPFVMGTT-GGDRVRL---HETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 79 ~~~g~~~ViGTT-G~~~~~~---~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
++.|+++++=-. ..+.++. .+++++.++.+..+.| |.-.+..+.+++
T Consensus 88 l~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i 140 (329)
T 3evn_A 88 LLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLL 140 (329)
T ss_dssp HHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHHH
T ss_pred HHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHHH
Confidence 999999998766 5565554 4445566677777777 466555555544
No 24
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.09 E-value=0.00086 Score=57.86 Aligned_cols=90 Identities=21% Similarity=0.206 Sum_probs=65.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++. . ++||+++++ . ..|+ + ++.. .+|+++.+ . +|| +||....++++.+++..+++
T Consensus 23 IG~~v~~~--~-~leLv~v~~--~-k~ge---l---gv~a--~~d~d~ll----a-~pD-~VVe~A~~~av~e~~~~iL~ 82 (253)
T 1j5p_A 23 IGKKLVEL--G-NFEKIYAYD--R-ISKD---I---PGVV--RLDEFQVP----S-DVS-TVVECASPEAVKEYSLQILK 82 (253)
T ss_dssp HHHHHHHH--S-CCSEEEEEC--S-SCCC---C---SSSE--ECSSCCCC----T-TCC-EEEECSCHHHHHHHHHHHTT
T ss_pred HHHHHHhc--C-CcEEEEEEe--c-cccc---c---Ccee--eCCHHHHh----h-CCC-EEEECCCHHHHHHHHHHHHH
Confidence 58888887 4 999999887 2 2221 1 2322 24565544 2 789 89999999999999999999
Q ss_pred cCCCEEEEcCCC--CH---HHHHHHHHccCCcEEE
Q 028115 81 VGVPFVMGTTGG--DR---VRLHETIENSNVYAVI 110 (213)
Q Consensus 81 ~g~~~ViGTTG~--~~---~~~~~~~~~~~~~~v~ 110 (213)
.|+++|+..+|. ++ +++++.+++.+..+.+
T Consensus 83 aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~v 117 (253)
T 1j5p_A 83 NPVNYIIISTSAFADEVFRERFFSELKNSPARVFF 117 (253)
T ss_dssp SSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEEC
T ss_pred CCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEe
Confidence 999999999994 43 3566667766666554
No 25
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.02 E-value=0.0045 Score=54.39 Aligned_cols=108 Identities=12% Similarity=0.058 Sum_probs=73.1
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCc--eeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGK--EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~--~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~ 77 (213)
||+..++.+. .++++|+++.++.+.....-....+. ....+ .+.++++++ ..+| +|+.+|-+..-.+.+..
T Consensus 17 ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~ 90 (362)
T 1ydw_A 17 IARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH--GSYESLLED---PEID-ALYVPLPTSLHVEWAIK 90 (362)
T ss_dssp THHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE--SSHHHHHHC---TTCC-EEEECCCGGGHHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeee--CCHHHHhcC---CCCC-EEEEcCChHHHHHHHHH
Confidence 7888888887 57899999888654221111111111 12333 477776642 3578 89999999999999999
Q ss_pred HHhcCCCEEEEc-CCCCHHHHHH---HHHccCCcEEEccCh
Q 028115 78 YSKVGVPFVMGT-TGGDRVRLHE---TIENSNVYAVISPQM 114 (213)
Q Consensus 78 ~~~~g~~~ViGT-TG~~~~~~~~---~~~~~~~~~v~a~N~ 114 (213)
|++.|+++++-. ...+.++.++ +++++++.+..+.|+
T Consensus 91 al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~~~~~ 131 (362)
T 1ydw_A 91 AAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMDGTMW 131 (362)
T ss_dssp HHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEECCCG
T ss_pred HHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEee
Confidence 999999999976 4667655444 455556777766654
No 26
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.01 E-value=0.0068 Score=52.49 Aligned_cols=116 Identities=16% Similarity=0.145 Sum_probs=79.3
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+..++.+. .++++|+++.++.+....+-... .+++ + .+.++++++ ..+| +|+..|-+..-.+.+..|+
T Consensus 14 ~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~--~~~~-~--~~~~~~l~~---~~~D-~V~i~tp~~~h~~~~~~al 84 (331)
T 4hkt_A 14 IGKVHAKAVSGNADARLVAVADAFPAAAEAIAGA--YGCE-V--RTIDAIEAA---ADID-AVVICTPTDTHADLIERFA 84 (331)
T ss_dssp HHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH--TTCE-E--CCHHHHHHC---TTCC-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHH--hCCC-c--CCHHHHhcC---CCCC-EEEEeCCchhHHHHHHHHH
Confidence 6888888877 57999999888655321111111 1344 3 577777653 3578 8999999999999999999
Q ss_pred hcCCCEEEEcC-CCCHHHHHH---HHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 80 KVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 80 ~~g~~~ViGTT-G~~~~~~~~---~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
+.|+++++-.+ +.+.++.++ ++++.++.+....| |+-.+..+.+++
T Consensus 85 ~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i 136 (331)
T 4hkt_A 85 RAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAI 136 (331)
T ss_dssp HTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHH
T ss_pred HcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHH
Confidence 99999998766 667665444 45556677777777 555555444443
No 27
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.93 E-value=0.0077 Score=46.87 Aligned_cols=100 Identities=11% Similarity=0.017 Sum_probs=70.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+.+.+.+.|+++.. +++.. .. + .|++++. ++++ +. ..+| ++|=|+.++.+.+.++.|.+
T Consensus 37 ~G~~~~~~l~~~G~~v~~-Vnp~~----~~--i--~G~~~y~--sl~~----l~-~~vD-lvvi~vp~~~~~~vv~~~~~ 99 (144)
T 2d59_A 37 DANIVMKYLLEHGYDVYP-VNPKY----EE--V--LGRKCYP--SVLD----IP-DKIE-VVDLFVKPKLTMEYVEQAIK 99 (144)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECTTC----SE--E--TTEECBS--SGGG----CS-SCCS-EEEECSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEE-ECCCC----Ce--E--CCeeccC--CHHH----cC-CCCC-EEEEEeCHHHHHHHHHHHHH
Confidence 578888888788888554 33221 11 1 1355542 3333 21 2578 77889999999999999999
Q ss_pred cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHH
Q 028115 81 VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVV 119 (213)
Q Consensus 81 ~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ 119 (213)
.|++.|+-++|+..+++.++++.+++. ++-|| ++|+.
T Consensus 100 ~gi~~i~~~~g~~~~~l~~~a~~~Gi~-vvGpn-c~gv~ 136 (144)
T 2d59_A 100 KGAKVVWFQYNTYNREASKKADEAGLI-IVANR-CMMRE 136 (144)
T ss_dssp HTCSEEEECTTCCCHHHHHHHHHTTCE-EEESC-CHHHH
T ss_pred cCCCEEEECCCchHHHHHHHHHHcCCE-EEcCC-chhhc
Confidence 999999999999878888888888877 44565 55553
No 28
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.92 E-value=0.012 Score=50.73 Aligned_cols=118 Identities=14% Similarity=0.122 Sum_probs=78.7
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+..++.+. .++++++++.++.+....+-....+. ...+ .|.++++ + ..+| +|+..|.|..-.+.+..|+
T Consensus 12 ~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~-~~~~--~~~~~~l-~---~~~D-~V~i~tp~~~h~~~~~~al 83 (325)
T 2ho3_A 12 ISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQN-IQLF--DQLEVFF-K---SSFD-LVYIASPNSLHFAQAKAAL 83 (325)
T ss_dssp HHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSS-CEEE--SCHHHHH-T---SSCS-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCC-CeEe--CCHHHHh-C---CCCC-EEEEeCChHHHHHHHHHHH
Confidence 6788888877 56899999887654221111111111 2333 4666655 2 3688 8999999999999999999
Q ss_pred hcCCCEEEEc-CCCCHHHHHH---HHHccCCcEEEccC--hhHHHHHHHHHHH
Q 028115 80 KVGVPFVMGT-TGGDRVRLHE---TIENSNVYAVISPQ--MGKQVVAFLAAME 126 (213)
Q Consensus 80 ~~g~~~ViGT-TG~~~~~~~~---~~~~~~~~~v~a~N--~SlGv~ll~~l~~ 126 (213)
+.|+++++-. ...+.++.++ ++++.++.+..+.| |+-++..+.++++
T Consensus 84 ~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~ 136 (325)
T 2ho3_A 84 SAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFLA 136 (325)
T ss_dssp HTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECTTTTCHHHHHHHHHHT
T ss_pred HcCCcEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEhhhcChHHHHHHHHhh
Confidence 9999999986 4567665444 45555666666655 6777766666554
No 29
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.91 E-value=0.012 Score=51.52 Aligned_cols=117 Identities=15% Similarity=0.088 Sum_probs=80.8
Q ss_pred ChHHHHHHHH-h-CCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~-~-~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+..++.+. . ++++|+++.+..+....+... ..+++.+ .|.++++++ ..+| +|+-.|-+..-.+.+..|
T Consensus 24 ~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~--~~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~a 95 (354)
T 3q2i_A 24 IANNHFGALEKHADRAELIDVCDIDPAALKAAVE--RTGARGH--ASLTDMLAQ---TDAD-IVILTTPSGLHPTQSIEC 95 (354)
T ss_dssp THHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHH--HHCCEEE--SCHHHHHHH---CCCS-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHH--HcCCcee--CCHHHHhcC---CCCC-EEEECCCcHHHHHHHHHH
Confidence 7888888876 4 689999998866532111111 1134444 578887753 3678 889999999999999999
Q ss_pred HhcCCCEEEEcC-CCCHHH---HHHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 79 SKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 79 ~~~g~~~ViGTT-G~~~~~---~~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
++.|+++++-.. ..+.++ +.+++++.++.+.+..| |+-.+..+.+++
T Consensus 96 l~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i 148 (354)
T 3q2i_A 96 SEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAM 148 (354)
T ss_dssp HHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHH
T ss_pred HHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHH
Confidence 999999999766 566654 44455566677777777 565555554443
No 30
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.90 E-value=0.0084 Score=52.27 Aligned_cols=117 Identities=9% Similarity=0.044 Sum_probs=79.0
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCcee-EeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v-~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+..++.+. .++++|+++.+..+....+-.... ++ ..+ .|+++.+++ ..+| +|+-.|-+..-.+.+..|
T Consensus 13 ~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~--~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~a 84 (344)
T 3ezy_A 13 IGTIHAENLKMIDDAILYAISDVREDRLREMKEKL--GVEKAY--KDPHELIED---PNVD-AVLVCSSTNTHSELVIAC 84 (344)
T ss_dssp HHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHH--TCSEEE--SSHHHHHHC---TTCC-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHh--CCCcee--CCHHHHhcC---CCCC-EEEEcCCCcchHHHHHHH
Confidence 6778888776 578999998886553211111111 22 233 477777653 3678 899999999999999999
Q ss_pred HhcCCCEEEEcC-CCCHHHH---HHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 79 SKVGVPFVMGTT-GGDRVRL---HETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 79 ~~~g~~~ViGTT-G~~~~~~---~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
++.|+++++-.. +.+.++. .+++++.++.+.+..| |.-.+..+.+++
T Consensus 85 l~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 137 (344)
T 3ezy_A 85 AKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAV 137 (344)
T ss_dssp HHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHH
T ss_pred HhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHH
Confidence 999999999876 6776654 4445556677777776 555555544443
No 31
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.87 E-value=0.0084 Score=51.70 Aligned_cols=117 Identities=13% Similarity=0.024 Sum_probs=75.5
Q ss_pred ChHHH-HHHHHhCCCeEEEEecCCCccccccccccCceeE-eecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAV-IKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQ-VHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i-~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~-i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+.. ++.+.+++++++++.++.+...-+.... .+++ .+ .|.++++++ ..+| +|+..|.|..-.+.+..|
T Consensus 11 ~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~--~g~~~~~--~~~~~~l~~---~~~D-~V~i~tp~~~h~~~~~~a 82 (332)
T 2glx_A 11 IAREWVIGAIRATGGEVVSMMSTSAERGAAYATE--NGIGKSV--TSVEELVGD---PDVD-AVYVSTTNELHREQTLAA 82 (332)
T ss_dssp HHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHH--TTCSCCB--SCHHHHHTC---TTCC-EEEECSCGGGHHHHHHHH
T ss_pred HHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHH--cCCCccc--CCHHHHhcC---CCCC-EEEEeCChhHhHHHHHHH
Confidence 67776 6666558899999888655321110110 1222 22 466766532 3578 899999999999999999
Q ss_pred HhcCCCEEEEc-CCCCHHHH---HHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 79 SKVGVPFVMGT-TGGDRVRL---HETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 79 ~~~g~~~ViGT-TG~~~~~~---~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
++.|+++++-. ...+.++. .+++++.++.+..+.| |+-++..+.+++
T Consensus 83 l~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i 135 (332)
T 2glx_A 83 IRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAI 135 (332)
T ss_dssp HHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHH
T ss_pred HHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHH
Confidence 99999999864 45666554 4445556677777777 444555544443
No 32
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=96.83 E-value=0.0069 Score=53.05 Aligned_cols=117 Identities=12% Similarity=0.031 Sum_probs=80.0
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+..++.+. .++++|+++.++.+....+.... .+++.+ .|+++++++ ..+| +|+..|-+..-.+.+..|+
T Consensus 16 ~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~--~g~~~~--~~~~~~l~~---~~~D-~V~i~tp~~~h~~~~~~al 87 (354)
T 3db2_A 16 WAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKR--YNCAGD--ATMEALLAR---EDVE-MVIITVPNDKHAEVIEQCA 87 (354)
T ss_dssp HHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHH--HTCCCC--SSHHHHHHC---SSCC-EEEECSCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH--cCCCCc--CCHHHHhcC---CCCC-EEEEeCChHHHHHHHHHHH
Confidence 6788888877 56999999888655322111111 133332 578877643 3678 8999999999999999999
Q ss_pred hcCCCEEEEcC-CCCHHHHHH---HHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 80 KVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 80 ~~g~~~ViGTT-G~~~~~~~~---~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
+.|+++++-.. +.+.++.++ ++++.++.+.+..| |+-.+..+.+++
T Consensus 88 ~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i 139 (354)
T 3db2_A 88 RSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMI 139 (354)
T ss_dssp HTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHH
T ss_pred HcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHH
Confidence 99999998766 667655444 45556677777777 555555555544
No 33
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.82 E-value=0.0073 Score=53.78 Aligned_cols=117 Identities=13% Similarity=0.047 Sum_probs=78.4
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+..++.+. .++++|+++.+..+....+-.. ..+++.+ .|.++++++ ..+| +|+-.|-|..-.+.+..|+
T Consensus 14 ~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~--~~g~~~~--~~~~ell~~---~~vD-~V~i~tp~~~H~~~~~~al 85 (387)
T 3moi_A 14 GSVLMAPAMRHHPDAQIVAACDPNEDVRERFGK--EYGIPVF--ATLAEMMQH---VQMD-AVYIASPHQFHCEHVVQAS 85 (387)
T ss_dssp HHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHH--HHTCCEE--SSHHHHHHH---SCCS-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHH--HcCCCeE--CCHHHHHcC---CCCC-EEEEcCCcHHHHHHHHHHH
Confidence 4556667776 5789999998865532111111 1134444 588887754 3678 8899999999999999999
Q ss_pred hcCCCEEEEcC-CCCHHH---HHHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 80 KVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 80 ~~g~~~ViGTT-G~~~~~---~~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
+.|+++++-.. ..+.++ +.+++++.++.+.++.| |.-.+..+.+++
T Consensus 86 ~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 137 (387)
T 3moi_A 86 EQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIV 137 (387)
T ss_dssp HTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHH
T ss_pred HCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHH
Confidence 99999998766 556554 44455566677778877 444444444443
No 34
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=96.78 E-value=0.0036 Score=54.00 Aligned_cols=103 Identities=11% Similarity=0.019 Sum_probs=68.8
Q ss_pred ChHH-HHHHHH-hCCCeEEEEecCCCccccccc-cccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHH
Q 028115 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKV-EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~-i~~~~~-~~~~elv~~~~~~~~~~g~~~-~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~ 77 (213)
||+. +++.+. .++++|+++.++.+... +.+ .. .+++.+ ++.++. + ..+| +|+.+|-+..-.+.+..
T Consensus 16 ~g~~~~~~~l~~~~~~~lvav~d~~~~~~-~~~~~~--~g~~~~--~~~~~l-~----~~~D-~V~i~tp~~~h~~~~~~ 84 (319)
T 1tlt_A 16 IAQKAWLPVLAAASDWTLQGAWSPTRAKA-LPICES--WRIPYA--DSLSSL-A----ASCD-AVFVHSSTASHFDVVST 84 (319)
T ss_dssp HHHHTHHHHHHSCSSEEEEEEECSSCTTH-HHHHHH--HTCCBC--SSHHHH-H----TTCS-EEEECSCTTHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEEECCCHHHH-HHHHHH--cCCCcc--CcHHHh-h----cCCC-EEEEeCCchhHHHHHHH
Confidence 5775 777776 57899999888655321 111 11 123332 455543 2 3688 89999999999999999
Q ss_pred HHhcCCCEEEEc-CCCCHHHHHHH---HHccCCcEEEccCh
Q 028115 78 YSKVGVPFVMGT-TGGDRVRLHET---IENSNVYAVISPQM 114 (213)
Q Consensus 78 ~~~~g~~~ViGT-TG~~~~~~~~~---~~~~~~~~v~a~N~ 114 (213)
|++.|+++++-. .+.+.++.+++ +++.++.+..+.|+
T Consensus 85 al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~ 125 (319)
T 1tlt_A 85 LLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNR 125 (319)
T ss_dssp HHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGG
T ss_pred HHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEeeec
Confidence 999999999984 56776655444 44556666666553
No 35
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.72 E-value=0.0092 Score=52.55 Aligned_cols=115 Identities=9% Similarity=0.038 Sum_probs=78.3
Q ss_pred ChHH-HHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~-i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+. .++.+. .++++|+++.+..+....+.. . +++.+ .|+++.+++ .++| +|+-.|-+..-.+.+..|
T Consensus 16 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~--~--~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~~a 85 (362)
T 3fhl_A 16 SGQVFHAPFISTNPHFELYKIVERSKELSKERY--P--QASIV--RSFKELTED---PEID-LIVVNTPDNTHYEYAGMA 85 (362)
T ss_dssp HHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTC--T--TSEEE--SCSHHHHTC---TTCC-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhC--C--CCceE--CCHHHHhcC---CCCC-EEEEeCChHHHHHHHHHH
Confidence 4554 555665 578999999887654322211 1 34454 477877753 3578 889999999999999999
Q ss_pred HhcCCCEEEEcC-CCCHHHH---HHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 79 SKVGVPFVMGTT-GGDRVRL---HETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 79 ~~~g~~~ViGTT-G~~~~~~---~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
++.|+++++=-. ..+.++. .++++++++.+.+..| |+-.+..+.+++
T Consensus 86 l~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 138 (362)
T 3fhl_A 86 LEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDIL 138 (362)
T ss_dssp HHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHH
T ss_pred HHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEEecceeCHHHHHHHHHH
Confidence 999999998766 5565554 4445556777777777 566665555544
No 36
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.71 E-value=0.0012 Score=58.71 Aligned_cols=120 Identities=15% Similarity=0.099 Sum_probs=80.6
Q ss_pred ChHHHHHHHH-h--------CCCeEEEEecCCCccccc-cc-c-ccC--ceeEeecCCchhHHHhhhhcCCCCEEEEEcC
Q 028115 1 MGKAVIKAAD-A--------AGLELVPVSFGTEEESGQ-KV-E-VCG--KEIQVHGLSDRESVLASVFDKYPNMIVVDYT 66 (213)
Q Consensus 1 MG~~i~~~~~-~--------~~~elv~~~~~~~~~~g~-~~-~-~~~--~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS 66 (213)
||+.+++.+. . .+++|+++.++....... ++ . ... ....++...|+++.+++ ..+| |+||+|
T Consensus 13 VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~---~~iD-vVv~~t 88 (327)
T 3do5_A 13 VGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRS---ADYD-VLIEAS 88 (327)
T ss_dssp HHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHH---SCCS-EEEECC
T ss_pred HHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcC---CCCC-EEEECC
Confidence 5888888886 4 789999998865432221 11 0 000 00112212377777754 3678 899999
Q ss_pred ChHH----HHHHHHHHHhcCCCEEEEcCCCCH---HHHHHHHHccCCcEEEccChhHHHHHHHHH
Q 028115 67 VPAA----VNGNAELYSKVGVPFVMGTTGGDR---VRLHETIENSNVYAVISPQMGKQVVAFLAA 124 (213)
Q Consensus 67 ~p~~----~~~~~~~~~~~g~~~ViGTTG~~~---~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l 124 (213)
.++. ..+++..|+++|+++|+...+.-. +++.+++++.++.+++-++..-|.-++..+
T Consensus 89 p~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~ea~v~~g~Pii~~l 153 (327)
T 3do5_A 89 VTRVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGAMPVVKLA 153 (327)
T ss_dssp CCC----CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECGGGSSTTSCCHHHH
T ss_pred CCcccchhHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEEEEeeecCHHHHHH
Confidence 6654 589999999999999999777532 466677777788889888887776665543
No 37
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.70 E-value=0.016 Score=50.66 Aligned_cols=115 Identities=14% Similarity=0.082 Sum_probs=78.3
Q ss_pred ChHH-HHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~-i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+. .++.+. .++++|+++.+..+....+.. .++.++ .|+++.+++ .++| +|+..|-+..-.+.+..|
T Consensus 18 ~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~----~~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~~a 87 (352)
T 3kux_A 18 ASKTFHAPLIMGTPGLELAGVSSSDASKVHADW----PAIPVV--SDPQMLFND---PSID-LIVIPTPNDTHFPLAQSA 87 (352)
T ss_dssp HHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTC----SSCCEE--SCHHHHHHC---SSCC-EEEECSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhC----CCCceE--CCHHHHhcC---CCCC-EEEEeCChHHHHHHHHHH
Confidence 4664 566666 578999999886553221111 123444 478887753 3578 889999888899999999
Q ss_pred HhcCCCEEEEcC-CCCHHHHHH---HHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 79 ~~~g~~~ViGTT-G~~~~~~~~---~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
++.|+++++-.. ..+.++.++ +++++++.+.+..| |+-.+..+.+++
T Consensus 88 l~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i 140 (352)
T 3kux_A 88 LAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLL 140 (352)
T ss_dssp HHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHH
T ss_pred HHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHH
Confidence 999999999877 677665444 45556677777777 455555555544
No 38
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.67 E-value=0.016 Score=50.53 Aligned_cols=119 Identities=16% Similarity=0.075 Sum_probs=78.3
Q ss_pred ChHHHHHHHH-h-CCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~-~-~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+..++.+. . ++++|+++.++.+....+-...-+.....+ .|+++++++ .++| +|+-.|-+..-.+.+..|
T Consensus 13 ~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~a 86 (344)
T 3mz0_A 13 IGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVY--PNDDSLLAD---ENVD-AVLVTSWGPAHESSVLKA 86 (344)
T ss_dssp HHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEE--SSHHHHHHC---TTCC-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeee--CCHHHHhcC---CCCC-EEEECCCchhHHHHHHHH
Confidence 6788888876 4 789999988865432111111112113343 578887653 3578 889999999999999999
Q ss_pred HhcCCCEEEEcC-CCCHHHHHH---HHHccCCcE-EEccC--hhHHHHHHHHHH
Q 028115 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYA-VISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 79 ~~~g~~~ViGTT-G~~~~~~~~---~~~~~~~~~-v~a~N--~SlGv~ll~~l~ 125 (213)
++.|+++++=.. +.+.++.++ ++++.++.+ .+..| |.-.+..+.+++
T Consensus 87 l~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i 140 (344)
T 3mz0_A 87 IKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEAL 140 (344)
T ss_dssp HHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHH
T ss_pred HHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHH
Confidence 999999998665 566665444 455556666 56666 555555544443
No 39
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.65 E-value=0.009 Score=54.31 Aligned_cols=118 Identities=11% Similarity=0.017 Sum_probs=76.0
Q ss_pred ChH-HHHHHHH-hCCCeEEEEecCCCccccccc-cccCc---eeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHH
Q 028115 1 MGK-AVIKAAD-AAGLELVPVSFGTEEESGQKV-EVCGK---EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGN 74 (213)
Q Consensus 1 MG~-~i~~~~~-~~~~elv~~~~~~~~~~g~~~-~~~~~---~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~ 74 (213)
||+ ..++.+. .++++|+++.+..+... +.+ ...+. ++.++ .|.++++++ ..+| +|+..|-+..-.+.
T Consensus 94 ~g~~~~~~~l~~~~~~~lvav~d~~~~~~-~~~a~~~g~~~~~~~~~--~~~~~ll~~---~~vD-~V~iatp~~~h~~~ 166 (433)
T 1h6d_A 94 YALNQILPGFAGCQHSRIEALVSGNAEKA-KIVAAEYGVDPRKIYDY--SNFDKIAKD---PKID-AVYIILPNSLHAEF 166 (433)
T ss_dssp HHHHTHHHHTTTCSSEEEEEEECSCHHHH-HHHHHHTTCCGGGEECS--SSGGGGGGC---TTCC-EEEECSCGGGHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEEEEcCCHHHH-HHHHHHhCCCccccccc--CCHHHHhcC---CCCC-EEEEcCCchhHHHH
Confidence 565 6777766 46899999888654221 111 11111 12233 467776542 3578 89999999999999
Q ss_pred HHHHHhcCCCEEEEc-CCCCHHHHH---HHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 75 AELYSKVGVPFVMGT-TGGDRVRLH---ETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 75 ~~~~~~~g~~~ViGT-TG~~~~~~~---~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
+..|++.|+++++-. .+.+.++.+ +++++.++.+..+.| |+-.+..+.+++
T Consensus 167 ~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 223 (433)
T 1h6d_A 167 AIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLI 223 (433)
T ss_dssp HHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHH
T ss_pred HHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEEechhcCHHHHHHHHHH
Confidence 999999999988865 456665544 445556677777777 555554444443
No 40
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.63 E-value=0.023 Score=49.65 Aligned_cols=110 Identities=13% Similarity=0.024 Sum_probs=76.2
Q ss_pred ChH-HHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGK-AVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~-~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+ ..++.+. .++++|+++.++.+.. .+++.+ .|.++.+++. ..+| +|+-.|-+..-.+.+..|
T Consensus 36 ig~~~~~~~l~~~~~~~lvav~d~~~~~---------~g~~~~--~~~~~ll~~~--~~vD-~V~i~tp~~~H~~~~~~a 101 (330)
T 4ew6_A 36 IVRDQHLPSIAKNANFKLVATASRHGTV---------EGVNSY--TTIEAMLDAE--PSID-AVSLCMPPQYRYEAAYKA 101 (330)
T ss_dssp HHHHTHHHHHHHCTTEEEEEEECSSCCC---------TTSEEE--SSHHHHHHHC--TTCC-EEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeCChhh---------cCCCcc--CCHHHHHhCC--CCCC-EEEEeCCcHHHHHHHHHH
Confidence 355 4666666 5799999998866432 134554 4888877531 3578 899999999999999999
Q ss_pred HhcCCCEEEEcC-CCCHHHH---HHHHHccCCcEEEccChh--HHHHHHHHH
Q 028115 79 SKVGVPFVMGTT-GGDRVRL---HETIENSNVYAVISPQMG--KQVVAFLAA 124 (213)
Q Consensus 79 ~~~g~~~ViGTT-G~~~~~~---~~~~~~~~~~~v~a~N~S--lGv~ll~~l 124 (213)
++.|+++++=.. +.+.++. .++++++++.+..+.|+- -.+..+.++
T Consensus 102 l~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~ 153 (330)
T 4ew6_A 102 LVAGKHVFLEKPPGATLSEVADLEALANKQGASLFASWHSRYAPAVEAAKAF 153 (330)
T ss_dssp HHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSTTHHHHHHH
T ss_pred HHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeEEEEehhhccHHHHHHHHH
Confidence 999999998765 4565554 445556678888887743 334444433
No 41
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=96.56 E-value=0.021 Score=44.19 Aligned_cols=99 Identities=14% Similarity=0.147 Sum_probs=67.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+.|+++.. +++... .+ .|++++. +++++. ..+| ++|=+..|+.+.+.++.|.+
T Consensus 29 ~G~~~~~~L~~~G~~V~~-vnp~~~----~i----~G~~~~~--s~~el~-----~~vD-lvii~vp~~~v~~v~~~~~~ 91 (138)
T 1y81_A 29 YGNIILKDLLSKGFEVLP-VNPNYD----EI----EGLKCYR--SVRELP-----KDVD-VIVFVVPPKVGLQVAKEAVE 91 (138)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECTTCS----EE----TTEECBS--SGGGSC-----TTCC-EEEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-eCCCCC----eE----CCeeecC--CHHHhC-----CCCC-EEEEEeCHHHHHHHHHHHHH
Confidence 789999998888998554 443321 11 1345542 444321 2578 77888889999999999999
Q ss_pred cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHH
Q 028115 81 VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQV 118 (213)
Q Consensus 81 ~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv 118 (213)
.|++.++--||-..+++.+++++.++. ++-|| ++|+
T Consensus 92 ~g~~~i~~~~~~~~~~l~~~a~~~Gi~-~igpn-c~g~ 127 (138)
T 1y81_A 92 AGFKKLWFQPGAESEEIRRFLEKAGVE-YSFGR-CIMV 127 (138)
T ss_dssp TTCCEEEECTTSCCHHHHHHHHHHTCE-EECSC-CHHH
T ss_pred cCCCEEEEcCccHHHHHHHHHHHCCCE-EEcCC-cceE
Confidence 999877666665566777777777777 45677 5554
No 42
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.55 E-value=0.012 Score=52.02 Aligned_cols=116 Identities=17% Similarity=0.142 Sum_probs=78.2
Q ss_pred ChHH-HHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~-i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+. .++.+. .++++|+++.+..+....+.. .+++++ .|.++.+++ ..+| +|+..|-+..-.+.+..|
T Consensus 18 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~----~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~H~~~~~~a 87 (364)
T 3e82_A 18 VGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDL----PDVTVI--ASPEAAVQH---PDVD-LVVIASPNATHAPLARLA 87 (364)
T ss_dssp HHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHC----TTSEEE--SCHHHHHTC---TTCS-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhC----CCCcEE--CCHHHHhcC---CCCC-EEEEeCChHHHHHHHHHH
Confidence 4664 566666 578999999887653221111 123444 478877643 3678 889999999999999999
Q ss_pred HhcCCCEEEEcC-CCCHHHH---HHHHHccCCcEEEccC--hhHHHHHHHHHHH
Q 028115 79 SKVGVPFVMGTT-GGDRVRL---HETIENSNVYAVISPQ--MGKQVVAFLAAME 126 (213)
Q Consensus 79 ~~~g~~~ViGTT-G~~~~~~---~~~~~~~~~~~v~a~N--~SlGv~ll~~l~~ 126 (213)
++.|+++++-.. +.+.++. .++++++++.+.+..| |+-.+..+.++++
T Consensus 88 l~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 141 (364)
T 3e82_A 88 LNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIE 141 (364)
T ss_dssp HHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred HHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHH
Confidence 999999988665 4566554 4445556677777777 5666655555543
No 43
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=96.54 E-value=0.011 Score=58.52 Aligned_cols=106 Identities=10% Similarity=0.107 Sum_probs=69.7
Q ss_pred hHHHHHHHH-h-----CCCeEEEEecCCCccccccc--cccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHH
Q 028115 2 GKAVIKAAD-A-----AGLELVPVSFGTEEESGQKV--EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNG 73 (213)
Q Consensus 2 G~~i~~~~~-~-----~~~elv~~~~~~~~~~g~~~--~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~ 73 (213)
|+.+.+.+. . ++.++|+++.+....-++.+ +....|++++. +.+++.... ..+| +.|-|.-|..+.+
T Consensus 506 g~~~~~ml~~~~~~~~~~~~vVa~V~P~~~g~~~~~~~G~~~~Gvp~y~--sv~ea~~~~--p~~D-laVI~vP~~~v~~ 580 (829)
T 3pff_A 506 TRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFK--NMADAMRKH--PEVD-VLINFASLRSAYD 580 (829)
T ss_dssp HHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEEES--SHHHHHHHC--TTCC-EEEECCCTTTHHH
T ss_pred HHHHHHHHHhcccccCCCCcEEEEEcCCCCCccceEEecCCcCCcccCC--cHHHHhhcc--CCCc-EEEEeCCHHHHHH
Confidence 566666655 3 67999999986543112222 22234688874 666654320 1368 8999999999999
Q ss_pred HHHHHHh-cCCCEEEE-cCCCCHHHHHH---HHHccCCcEEEccC
Q 028115 74 NAELYSK-VGVPFVMG-TTGGDRVRLHE---TIENSNVYAVISPQ 113 (213)
Q Consensus 74 ~~~~~~~-~g~~~ViG-TTG~~~~~~~~---~~~~~~~~~v~a~N 113 (213)
.++.|.+ .|++.|+. |.||.+.+.++ ++++.++ -++-||
T Consensus 581 av~ea~~~~Gvk~~Viis~Gf~e~~~~~l~~~A~~~g~-rliGPN 624 (829)
T 3pff_A 581 STMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGV-TIIGPA 624 (829)
T ss_dssp HHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTC-EEECSS
T ss_pred HHHHHHhhCCCCEEEEeCCCCCHHHHHHHHHHHHHcCC-EEEcCC
Confidence 9999999 99996554 99998754444 4444333 456666
No 44
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.49 E-value=0.053 Score=46.93 Aligned_cols=109 Identities=12% Similarity=-0.033 Sum_probs=71.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhh-----hcCCCCEEEEEcCChHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASV-----FDKYPNMIVVDYTVPAAVNGNA 75 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~-----~~~~~d~VvIDFS~p~~~~~~~ 75 (213)
||+..++++.+.+.+|+++.+..+.. ...... -.+.+++ .+.++.++-+ .+.++| +|+-.|-+..=.+.+
T Consensus 15 i~~~h~~~l~~~~~~lvav~d~~~~~-~~~~~~-~~~~~~~--~~~~~ll~~~~~l~~~~~~vD-~V~I~tP~~~H~~~~ 89 (312)
T 3o9z_A 15 IAPRHLKAIKEVGGVLVASLDPATNV-GLVDSF-FPEAEFF--TEPEAFEAYLEDLRDRGEGVD-YLSIASPNHLHYPQI 89 (312)
T ss_dssp SHHHHHHHHHHTTCEEEEEECSSCCC-GGGGGT-CTTCEEE--SCHHHHHHHHHHHHHTTCCCS-EEEECSCGGGHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEEcCCHHH-HHHHhh-CCCCcee--CCHHHHHHHhhhhcccCCCCc-EEEECCCchhhHHHH
Confidence 57777888876689999998865532 111110 1124444 3666665211 234678 788899999999999
Q ss_pred HHHHhcCCCEEEEcC-CCCHHH---HHHHHHccCCcEEEccCh
Q 028115 76 ELYSKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQM 114 (213)
Q Consensus 76 ~~~~~~g~~~ViGTT-G~~~~~---~~~~~~~~~~~~v~a~N~ 114 (213)
..|++.|+++++=-. ..+.++ +.++++++++.+....|+
T Consensus 90 ~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~ 132 (312)
T 3o9z_A 90 RMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQL 132 (312)
T ss_dssp HHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEEECCGG
T ss_pred HHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEEEEeeh
Confidence 999999999988543 345544 445555667777777774
No 45
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.49 E-value=0.012 Score=51.88 Aligned_cols=116 Identities=16% Similarity=0.096 Sum_probs=78.9
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+..++.+. .++++|+++.+..+... +.. ...+++.+ .|.++.+++ ..+| +|+-.|-+..-.+.+..|+
T Consensus 16 ~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~a--~~~g~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~al 86 (359)
T 3e18_A 16 MGSYHVTLASAADNLEVHGVFDILAEKR-EAA--AQKGLKIY--ESYEAVLAD---EKVD-AVLIATPNDSHKELAISAL 86 (359)
T ss_dssp HHHHHHHHHHTSTTEEEEEEECSSHHHH-HHH--HTTTCCBC--SCHHHHHHC---TTCC-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEcCCHHHH-HHH--HhcCCcee--CCHHHHhcC---CCCC-EEEEcCCcHHHHHHHHHHH
Confidence 5777788777 57899999888655321 111 12234443 588887753 3678 8899999999999999999
Q ss_pred hcCCCEEEEcC-CCCHHH---HHHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 80 KVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 80 ~~g~~~ViGTT-G~~~~~---~~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
+.|+++++=-. ..+.++ +.++++++++.+.+..| |.-.+..+.+++
T Consensus 87 ~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i 138 (359)
T 3e18_A 87 EAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMF 138 (359)
T ss_dssp HTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHH
T ss_pred HCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHH
Confidence 99999998654 455554 44455566677777777 555555555544
No 46
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.43 E-value=0.0094 Score=52.40 Aligned_cols=117 Identities=8% Similarity=-0.044 Sum_probs=77.3
Q ss_pred ChH-HHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGK-AVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~-~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+ ..++.+. .++++|+++.++.+....+-.. ..+++.+ .++++++++ ..+| +|+..|-+..-.+.+..|
T Consensus 38 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~--~~g~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~a 109 (350)
T 3rc1_A 38 IAWRRALPALEAEPLTEVTAIASRRWDRAKRFTE--RFGGEPV--EGYPALLER---DDVD-AVYVPLPAVLHAEWIDRA 109 (350)
T ss_dssp HHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHH--HHCSEEE--ESHHHHHTC---TTCS-EEEECCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHH--HcCCCCc--CCHHHHhcC---CCCC-EEEECCCcHHHHHHHHHH
Confidence 566 5667776 5789999988865422111111 1134444 577777642 3578 888999999999999999
Q ss_pred HhcCCCEEEEcC-CCCHHHHHH---HHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 79 ~~~g~~~ViGTT-G~~~~~~~~---~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
++.|+++++=-. +.+.++.++ +++++++.+....| |.-.+..+.+++
T Consensus 110 l~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 162 (350)
T 3rc1_A 110 LRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADML 162 (350)
T ss_dssp HHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHH
T ss_pred HHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHH
Confidence 999999888655 566655444 45556677766665 555555555544
No 47
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.42 E-value=0.04 Score=48.46 Aligned_cols=120 Identities=12% Similarity=0.066 Sum_probs=79.5
Q ss_pred ChHHHHHHHH-h-CCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~-~-~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+..++.+. . ++++|+++.+..+....+-..--+.....+ .++++++++ ..+| +|+-.|-+..-.+.+..|
T Consensus 34 ~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~a 107 (357)
T 3ec7_A 34 IGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDY--NDYHDLIND---KDVE-VVIITASNEAHADVAVAA 107 (357)
T ss_dssp HHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEE--SSHHHHHHC---TTCC-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeee--CCHHHHhcC---CCCC-EEEEcCCcHHHHHHHHHH
Confidence 6777888776 4 789999988876532211111112123443 578877653 3578 888999999999999999
Q ss_pred HhcCCCEEEEcC-CCCHHHHHH---HHHccCCcE-EEccC--hhHHHHHHHHHHH
Q 028115 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYA-VISPQ--MGKQVVAFLAAME 126 (213)
Q Consensus 79 ~~~g~~~ViGTT-G~~~~~~~~---~~~~~~~~~-v~a~N--~SlGv~ll~~l~~ 126 (213)
++.|+++++=-. ..+.++.++ ++++.++.+ .+..| |+-.+..+.++++
T Consensus 108 l~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~ 162 (357)
T 3ec7_A 108 LNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIID 162 (357)
T ss_dssp HHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHHH
T ss_pred HHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHHh
Confidence 999999998766 566655444 455556666 46666 6666655555543
No 48
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.39 E-value=0.0085 Score=52.78 Aligned_cols=115 Identities=11% Similarity=0.096 Sum_probs=76.9
Q ss_pred ChHH-HHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~-i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+. .++.+. .++++|+++.+..+....+.. . +++.+ .|+++.+++ ..+| +|+-.|-+..-.+.+..|
T Consensus 16 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~--~--~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~~a 85 (358)
T 3gdo_A 16 SGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDF--P--DAEVV--HELEEITND---PAIE-LVIVTTPSGLHYEHTMAC 85 (358)
T ss_dssp HHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHC--T--TSEEE--SSTHHHHTC---TTCC-EEEECSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhC--C--CCceE--CCHHHHhcC---CCCC-EEEEcCCcHHHHHHHHHH
Confidence 4554 455665 578999998886653221111 1 24444 477877653 3578 889999999999999999
Q ss_pred HhcCCCEEEEcC-CCCHHH---HHHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 79 SKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 79 ~~~g~~~ViGTT-G~~~~~---~~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
++.|+++++=-. ..+.++ +.++++++++.+.+..| |+-.+..+.+++
T Consensus 86 l~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i 138 (358)
T 3gdo_A 86 IQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLI 138 (358)
T ss_dssp HHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHH
T ss_pred HHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHH
Confidence 999999999655 455554 44455566777777777 555555555544
No 49
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.23 E-value=0.042 Score=48.00 Aligned_cols=116 Identities=10% Similarity=0.019 Sum_probs=76.6
Q ss_pred ChH-HHHHHHH-hCCCeEEEEecCCCccccccc-c-ccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHH
Q 028115 1 MGK-AVIKAAD-AAGLELVPVSFGTEEESGQKV-E-VCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 1 MG~-~i~~~~~-~~~~elv~~~~~~~~~~g~~~-~-~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (213)
||+ ..++.+. .++++|+++.++.. .+.+ . ....+++.+ .|+++.+++ .++| +|+-.|-+..-.+.+.
T Consensus 13 ~g~~~~~~~l~~~~~~~l~av~d~~~---~~~~a~~~~~~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~ 83 (349)
T 3i23_A 13 SANRYHLPYVMIRETLEVKTIFDLHV---NEKAAAPFKEKGVNFT--ADLNELLTD---PEIE-LITICTPAHTHYDLAK 83 (349)
T ss_dssp HHHHTTHHHHTTCTTEEEEEEECTTC---CHHHHHHHHTTTCEEE--SCTHHHHSC---TTCC-EEEECSCGGGHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEEEECCCH---HHHHHHhhCCCCCeEE--CCHHHHhcC---CCCC-EEEEeCCcHHHHHHHH
Confidence 455 4555565 57899999988651 1222 1 100134554 477887653 3578 8899999999999999
Q ss_pred HHHhcCCCEEEEcC-CCCHHH---HHHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 77 LYSKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 77 ~~~~~g~~~ViGTT-G~~~~~---~~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
.|++.|+++++=-. ..+.++ +.++++++++.+.+..| |.-.+..+.+++
T Consensus 84 ~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i 138 (349)
T 3i23_A 84 QAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVV 138 (349)
T ss_dssp HHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHH
Confidence 99999999998655 455554 44455666788888877 555555555544
No 50
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=96.20 E-value=0.021 Score=49.88 Aligned_cols=116 Identities=10% Similarity=0.039 Sum_probs=75.1
Q ss_pred ChHH-HHHHH-H-hCCCeEEEEecCCCccccccc-cccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHH
Q 028115 1 MGKA-VIKAA-D-AAGLELVPVSFGTEEESGQKV-EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 1 MG~~-i~~~~-~-~~~~elv~~~~~~~~~~g~~~-~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (213)
||+. ..+++ . .++++|+++.++.+... +.. ... +++++ .|+++.+++ .++| +|+-.|-+..-.+.+.
T Consensus 13 ~g~~~~~~~~~~~~~~~~l~av~d~~~~~~-~~~~~~~--~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~ 83 (345)
T 3f4l_A 13 STTRYHLPYVLNRKDSWHVAHIFRRHAKPE-EQAPIYS--HIHFT--SDLDEVLND---PDVK-LVVVCTHADSHFEYAK 83 (345)
T ss_dssp HHHHHTHHHHTTCTTTEEEEEEECSSCCGG-GGSGGGT--TCEEE--SCTHHHHTC---TTEE-EEEECSCGGGHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEcCCHhHH-HHHHhcC--CCceE--CCHHHHhcC---CCCC-EEEEcCChHHHHHHHH
Confidence 4653 55523 4 57899999998765322 111 111 34554 477777642 2466 8888998888999999
Q ss_pred HHHhcCCCEEEEc-CCCCHHH---HHHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 77 LYSKVGVPFVMGT-TGGDRVR---LHETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 77 ~~~~~g~~~ViGT-TG~~~~~---~~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
.|++.|+++++=- -..+.++ +.+++++.++.+.+..| |.-.+..+.+++
T Consensus 84 ~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i 138 (345)
T 3f4l_A 84 RALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAI 138 (345)
T ss_dssp HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHH
T ss_pred HHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEechhcCHHHHHHHHHH
Confidence 9999999998843 2345554 44555566777877777 555555555544
No 51
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.14 E-value=0.022 Score=44.18 Aligned_cols=103 Identities=11% Similarity=0.070 Sum_probs=72.3
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+.+.+.+.|+++.. +++. ..++.+ .|++++. ++++ +. ..+| ++|=|..|+.+.+.++.|.+
T Consensus 28 ~G~~~~~~l~~~G~~v~~-vnp~--~~~~~i----~G~~~~~--sl~e----l~-~~vD-lavi~vp~~~~~~v~~~~~~ 92 (140)
T 1iuk_A 28 PAHYVPRYLREQGYRVLP-VNPR--FQGEEL----FGEEAVA--SLLD----LK-EPVD-ILDVFRPPSALMDHLPEVLA 92 (140)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECGG--GTTSEE----TTEECBS--SGGG----CC-SCCS-EEEECSCHHHHTTTHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEE-eCCC--cccCcC----CCEEecC--CHHH----CC-CCCC-EEEEEeCHHHHHHHHHHHHH
Confidence 588898888888988544 3322 112221 1355552 3333 21 3578 78889999999999999999
Q ss_pred cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHH
Q 028115 81 VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVA 120 (213)
Q Consensus 81 ~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~l 120 (213)
.|++.|+-++|+..+++.+++++.++.++ -|| ++|+..
T Consensus 93 ~gi~~i~~~~g~~~~~~~~~a~~~Gir~v-gpn-c~g~~~ 130 (140)
T 1iuk_A 93 LRPGLVWLQSGIRHPEFEKALKEAGIPVV-ADR-CLMVEH 130 (140)
T ss_dssp HCCSCEEECTTCCCHHHHHHHHHTTCCEE-ESC-CHHHHH
T ss_pred cCCCEEEEcCCcCHHHHHHHHHHcCCEEE-cCC-ccceEC
Confidence 99999999999988888888888887654 566 666543
No 52
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.06 E-value=0.025 Score=50.98 Aligned_cols=133 Identities=13% Similarity=0.232 Sum_probs=79.7
Q ss_pred ChHHHHHHHHhCC-C-eEEEEecCCCccccccc-ccc-----Cc---eeEeecCCchhHHHhhhhcCCCCEEEEEcCChH
Q 028115 1 MGKAVIKAADAAG-L-ELVPVSFGTEEESGQKV-EVC-----GK---EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPA 69 (213)
Q Consensus 1 MG~~i~~~~~~~~-~-elv~~~~~~~~~~g~~~-~~~-----~~---~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~ 69 (213)
+|+.+++.+.+.+ . ..+...++......+.. .+. .. .+.+.+.+++++++++ ..+| +||..+.|.
T Consensus 12 iG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~---~~~D-vVin~ag~~ 87 (405)
T 4ina_A 12 VGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE---VKPQ-IVLNIALPY 87 (405)
T ss_dssp HHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH---HCCS-EEEECSCGG
T ss_pred HHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh---hCCC-EEEECCCcc
Confidence 5889999888554 3 33444554432211111 111 11 1122112234444432 2489 899999998
Q ss_pred HHHHHHHHHHhcCCCEEEEcCCCCH-----------HHHHHHHHccCCcEEEccChhHHHHHHHHHHHHHHH-hcCCCCC
Q 028115 70 AVNGNAELYSKVGVPFVMGTTGGDR-----------VRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAE-QFPGAFS 137 (213)
Q Consensus 70 ~~~~~~~~~~~~g~~~ViGTTG~~~-----------~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~~~aa~-~l~~~~~ 137 (213)
.-...++.|++.|+++|- +|++.. .++.+.++++++.++..+.|.-|+.-++ +..+++ .+.
T Consensus 88 ~~~~v~~a~l~~g~~vvD-~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~PG~~~l~--a~~~~~~~~~---- 160 (405)
T 4ina_A 88 QDLTIMEACLRTGVPYLD-TANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFDPGVTNVF--CAYAQKHYFD---- 160 (405)
T ss_dssp GHHHHHHHHHHHTCCEEE-SSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTTTBHHHHH--HHHHHHHTCS----
T ss_pred cChHHHHHHHHhCCCEEE-ecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCCccHHHHH--HHHHHHhccC----
Confidence 888999999999999886 667532 1455566677889999999888865443 344555 353
Q ss_pred CCcEEEEec
Q 028115 138 GYSLQVLES 146 (213)
Q Consensus 138 ~~dieI~E~ 146 (213)
+++.++.
T Consensus 161 --~i~~i~i 167 (405)
T 4ina_A 161 --EIHEIDI 167 (405)
T ss_dssp --EEEEEEE
T ss_pred --cccEEEE
Confidence 4555554
No 53
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.99 E-value=0.021 Score=51.77 Aligned_cols=120 Identities=18% Similarity=0.127 Sum_probs=74.4
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCcccccccc-c--cCc-eeEeec--CCchhHHHhhhhcCCCCEEEEEcCChHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVE-V--CGK-EIQVHG--LSDRESVLASVFDKYPNMIVVDYTVPAAVNG 73 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~-~--~~~-~v~i~~--~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~ 73 (213)
||+..++.+. .++++|+++.+..+....+... + .+. ...++. .+|.++++++ ..+| +|+-.|-+..-.+
T Consensus 31 ~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~---~~vD-~V~i~tp~~~h~~ 106 (444)
T 2ixa_A 31 RGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKD---KNID-AVFVSSPWEWHHE 106 (444)
T ss_dssp HHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTC---TTCC-EEEECCCGGGHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcC---CCCC-EEEEcCCcHHHHH
Confidence 5677777776 5789999998866532211111 0 011 134442 2377776642 3578 7888998998999
Q ss_pred HHHHHHhcCCCEEEEcC-CCCHHH---HHHHHHccCCcEEEccC--hhHHHHHHHHH
Q 028115 74 NAELYSKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQ--MGKQVVAFLAA 124 (213)
Q Consensus 74 ~~~~~~~~g~~~ViGTT-G~~~~~---~~~~~~~~~~~~v~a~N--~SlGv~ll~~l 124 (213)
.+..|++.|+++++=-. ..+.++ +.++++++++.+.+..| |.-++..+.++
T Consensus 107 ~~~~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~ 163 (444)
T 2ixa_A 107 HGVAAMKAGKIVGMEVSGAITLEECWDYVKVSEQTGVPLMALENVCYRRDVMAILNM 163 (444)
T ss_dssp HHHHHHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHH
Confidence 99999999999888432 234444 44555566677777666 44444433333
No 54
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=95.95 E-value=0.043 Score=48.30 Aligned_cols=108 Identities=13% Similarity=0.064 Sum_probs=71.7
Q ss_pred ChHH-HHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~-i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+. .++.+. .++++|+++.++.+....+-...-+ +..++ .|.++++++ .++| +|+-.|-+..-.+.+..|
T Consensus 16 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~-~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~~a 88 (359)
T 3m2t_A 16 QMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFIS-DIPVL--DNVPAMLNQ---VPLD-AVVMAGPPQLHFEMGLLA 88 (359)
T ss_dssp HHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSC-SCCEE--SSHHHHHHH---SCCS-EEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcC-CCccc--CCHHHHhcC---CCCC-EEEEcCCcHHHHHHHHHH
Confidence 4553 666666 5789999998865532111111000 23333 578887764 3678 788999999999999999
Q ss_pred HhcCCCEEEEcC-CCCHHH---HHHHHHccCCcEEEccChh
Q 028115 79 SKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQMG 115 (213)
Q Consensus 79 ~~~g~~~ViGTT-G~~~~~---~~~~~~~~~~~~v~a~N~S 115 (213)
++.|+++++=-. ..+.++ +.++++++++.+.+..|+-
T Consensus 89 l~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R 129 (359)
T 3m2t_A 89 MSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFK 129 (359)
T ss_dssp HHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEECCHHH
T ss_pred HHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 999999888544 455554 4445555678888887743
No 55
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.83 E-value=0.037 Score=48.26 Aligned_cols=117 Identities=15% Similarity=-0.001 Sum_probs=75.7
Q ss_pred ChHHHHHHHH-h-CCCeEEEEecCCCccccccccccCcee-EeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~-~-~~~elv~~~~~~~~~~g~~~~~~~~~v-~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~ 77 (213)
||+..++.+. . ++++|+++.+..+....+-..- .++ +++ .|.++.+++ ..+| +|+-.|-+..-.+.+..
T Consensus 30 ~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~--~~~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~~ 101 (340)
T 1zh8_A 30 ARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKM--VGNPAVF--DSYEELLES---GLVD-AVDLTLPVELNLPFIEK 101 (340)
T ss_dssp HHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHH--HSSCEEE--SCHHHHHHS---SCCS-EEEECCCGGGHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHH--hCCCccc--CCHHHHhcC---CCCC-EEEEeCCchHHHHHHHH
Confidence 4566677776 4 6899999888655321110110 122 343 478887753 3678 78888888889999999
Q ss_pred HHhcCCCEEEEcC-CCCHHH---HHHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 78 YSKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 78 ~~~~g~~~ViGTT-G~~~~~---~~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
|++.|+++++=-. ..+.++ +.++++++++.+....| |+-.+..+.+++
T Consensus 102 al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 155 (340)
T 1zh8_A 102 ALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELV 155 (340)
T ss_dssp HHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHHHHHHHHHH
T ss_pred HHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHH
Confidence 9999999988654 345554 44455566677777766 555555555443
No 56
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=95.83 E-value=0.048 Score=47.32 Aligned_cols=117 Identities=7% Similarity=-0.037 Sum_probs=71.7
Q ss_pred hHHHHHHHHhCCCeEEEEecCCCc-ccccccccc---CceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHH
Q 028115 2 GKAVIKAADAAGLELVPVSFGTEE-ESGQKVEVC---GKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 2 G~~i~~~~~~~~~elv~~~~~~~~-~~g~~~~~~---~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~ 77 (213)
|+..++.+ .++++|+++.++.+. ...+-.... +.+.+.+ .|.++.+++ .++| +|+-.|-+..=.+.+..
T Consensus 14 ~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ll~~---~~vD-~V~I~tp~~~H~~~~~~ 86 (337)
T 3ip3_A 14 FRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKY--NNWWEMLEK---EKPD-ILVINTVFSLNGKILLE 86 (337)
T ss_dssp HHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEEC--SSHHHHHHH---HCCS-EEEECSSHHHHHHHHHH
T ss_pred HHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCccc--CCHHHHhcC---CCCC-EEEEeCCcchHHHHHHH
Confidence 34344444 678999999886542 211111111 2223444 588888764 3688 77778888888999999
Q ss_pred HHhcCCCEEEEcC-CCCHH---HHHHHHHccCCc--EEEccC--hhHHHHHHHHHH
Q 028115 78 YSKVGVPFVMGTT-GGDRV---RLHETIENSNVY--AVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 78 ~~~~g~~~ViGTT-G~~~~---~~~~~~~~~~~~--~v~a~N--~SlGv~ll~~l~ 125 (213)
|++.|+++++=-. ..+.+ ++.++++++++. +....| |+-.+..+.+++
T Consensus 87 al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~~~~k~~i 142 (337)
T 3ip3_A 87 ALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTAKKLV 142 (337)
T ss_dssp HHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGGGGSHHHHHHHHHH
T ss_pred HHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEecccccCCHHHHHHHHHH
Confidence 9999999776322 23444 455556666777 555555 555555555444
No 57
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.69 E-value=0.049 Score=49.42 Aligned_cols=118 Identities=11% Similarity=-0.044 Sum_probs=76.4
Q ss_pred ChHHHHHHHH-h-CCCeEEEEecCCCccccccc-cccCc-eeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHH
Q 028115 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKV-EVCGK-EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 1 MG~~i~~~~~-~-~~~elv~~~~~~~~~~g~~~-~~~~~-~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (213)
||+..++.+. . ++++|+++.+..+... +.+ ..-+. .+..+ .|.++++++ ..+| +|+-.|-+..-.+.+.
T Consensus 35 ~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~a~~~g~~~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~ 107 (438)
T 3btv_A 35 AIKTHYPAILQLSSQFQITALYSPKIETS-IATIQRLKLSNATAF--PTLESFASS---STID-MIVIAIQVASHYEVVM 107 (438)
T ss_dssp TTTTHHHHHHHTTTTEEEEEEECSSHHHH-HHHHHHTTCTTCEEE--SSHHHHHHC---SSCS-EEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEEeCCHHHH-HHHHHHcCCCcceee--CCHHHHhcC---CCCC-EEEEeCCcHHHHHHHH
Confidence 5777788876 5 7899999888654221 111 11111 12243 477777643 3578 8899999999999999
Q ss_pred HHHhcC------CCEEEEc-CCCCHHHHHHH---HHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 77 LYSKVG------VPFVMGT-TGGDRVRLHET---IENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 77 ~~~~~g------~~~ViGT-TG~~~~~~~~~---~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
.|++.| +++++-- ...+.++.+++ ++++++.+.+..| |.-.+..+.+++
T Consensus 108 ~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 168 (438)
T 3btv_A 108 PLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELI 168 (438)
T ss_dssp HHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEEEECGGGGCHHHHHHHHHH
T ss_pred HHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEEEecccccCHHHHHHHHHH
Confidence 999999 9999884 45666654444 4455566666655 455555444443
No 58
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=95.68 E-value=0.0044 Score=54.84 Aligned_cols=119 Identities=14% Similarity=0.083 Sum_probs=76.2
Q ss_pred ChHHHHHHHH-hC-------CCeEEEEecCCCcccccccc---c----cCceeE-eec-CCchhHHHhhhhcCCCCEEEE
Q 028115 1 MGKAVIKAAD-AA-------GLELVPVSFGTEEESGQKVE---V----CGKEIQ-VHG-LSDRESVLASVFDKYPNMIVV 63 (213)
Q Consensus 1 MG~~i~~~~~-~~-------~~elv~~~~~~~~~~g~~~~---~----~~~~v~-i~~-~~~~~~~l~~~~~~~~d~VvI 63 (213)
||+.+++.+. .+ +++|+++.++........+. . ...+++ ++. ..|.++.+ + ...| |||
T Consensus 17 VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll-~---~~iD-vVv 91 (331)
T 3c8m_A 17 VGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEAL-A---RDFD-IVV 91 (331)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHH-H---SSCS-EEE
T ss_pred HHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHh-C---CCCC-EEE
Confidence 5788888876 33 58999988865532221110 0 001111 111 12677766 3 3678 899
Q ss_pred EcCChH----HHHHHHHHHHhcCCCEEEEcCCCCH---HHHHHHHHccCCcEEEccChhHHHHHHHHH
Q 028115 64 DYTVPA----AVNGNAELYSKVGVPFVMGTTGGDR---VRLHETIENSNVYAVISPQMGKQVVAFLAA 124 (213)
Q Consensus 64 DFS~p~----~~~~~~~~~~~~g~~~ViGTTG~~~---~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l 124 (213)
|.|.+. ...+++..|+++|+++|+..-+... +++.++++++++.+.+.++..-|.-++..+
T Consensus 92 ~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~ea~vg~giPii~~l 159 (331)
T 3c8m_A 92 DATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRYEATVAGGVPLFSFI 159 (331)
T ss_dssp ECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCCHHHH
T ss_pred ECCCCCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEEEeecccccHHHHHH
Confidence 999874 7888999999999999997555432 356666767778888887777775544443
No 59
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.46 E-value=0.27 Score=42.59 Aligned_cols=120 Identities=10% Similarity=0.013 Sum_probs=77.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHh---hh---hcCCCCEEEEEcCChHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLA---SV---FDKYPNMIVVDYTVPAAVNGN 74 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~---~~---~~~~~d~VvIDFS~p~~~~~~ 74 (213)
||+..++++.+.+.+|+++.+..+.. . ...-.-.+.+++ .+.++.++ .+ .+..+| +|+-.|-+..=.+.
T Consensus 15 i~~~h~~~l~~~~~~lvav~d~~~~~-~-~~~~~~~~~~~~--~~~~~ll~~~~~l~~~~~~~vD-~V~I~tP~~~H~~~ 89 (318)
T 3oa2_A 15 IAPRHMRAIKDTGNCLVSAYDINDSV-G-IIDSISPQSEFF--TEFEFFLDHASNLKRDSATALD-YVSICSPNYLHYPH 89 (318)
T ss_dssp SHHHHHHHHHHTTCEEEEEECSSCCC-G-GGGGTCTTCEEE--SSHHHHHHHHHHHTTSTTTSCC-EEEECSCGGGHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEEcCCHHH-H-HHHhhCCCCcEE--CCHHHHHHhhhhhhhccCCCCc-EEEECCCcHHHHHH
Confidence 57777888876689999998865532 1 110001134454 36776652 11 134678 78888989999999
Q ss_pred HHHHHhcCCCEEEEcC-CCCHHHH---HHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 75 AELYSKVGVPFVMGTT-GGDRVRL---HETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 75 ~~~~~~~g~~~ViGTT-G~~~~~~---~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
+..|++.|+++++=-. ..+.++. .+++++.++.+....| |.-.+..+.+++
T Consensus 90 ~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 146 (318)
T 3oa2_A 90 IAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKV 146 (318)
T ss_dssp HHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHH
T ss_pred HHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEEEEEhhhcCHHHHHHHHHH
Confidence 9999999999988655 3555544 4455556677777766 444444444443
No 60
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.46 E-value=0.1 Score=45.88 Aligned_cols=113 Identities=12% Similarity=0.012 Sum_probs=71.5
Q ss_pred HHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCC
Q 028115 5 VIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP 84 (213)
Q Consensus 5 i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~ 84 (213)
....+..++++|+++.+..+....+-..--+ ....+ .|.++.+++ ..+| +|+-.|-+..=.+.+..|++.|++
T Consensus 42 ~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~-~~~~~--~~~~~ll~~---~~vD-~V~I~tp~~~H~~~~~~al~aGkh 114 (361)
T 3u3x_A 42 QVNCLLRAGARLAGFHEKDDALAAEFSAVYA-DARRI--ATAEEILED---ENIG-LIVSAAVSSERAELAIRAMQHGKD 114 (361)
T ss_dssp HHHHHHHTTCEEEEEECSCHHHHHHHHHHSS-SCCEE--SCHHHHHTC---TTCC-EEEECCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHhhcCCcEEEEEEcCCHHHHHHHHHHcC-CCccc--CCHHHHhcC---CCCC-EEEEeCChHHHHHHHHHHHHCCCe
Confidence 4444457899999998876532111111001 12333 478887753 3578 788888888889999999999999
Q ss_pred EEEEcC-CCCHHH---HHHHHHccCCcEEEccChh---HHHHHHHHH
Q 028115 85 FVMGTT-GGDRVR---LHETIENSNVYAVISPQMG---KQVVAFLAA 124 (213)
Q Consensus 85 ~ViGTT-G~~~~~---~~~~~~~~~~~~v~a~N~S---lGv~ll~~l 124 (213)
+++=-. ..+.++ +.++++++++.+.+..|+- -.+..+.++
T Consensus 115 Vl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~~~R~~~p~~~~~k~~ 161 (361)
T 3u3x_A 115 VLVDKPGMTSFDQLAKLRRVQAETGRIFSILYSEHFESPATVKAGEL 161 (361)
T ss_dssp EEEESCSCSSHHHHHHHHHHHHTTCCCEEEECHHHHTCHHHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHcCCEEEEechHhhCCHHHHHHHHH
Confidence 998544 345544 4455666677787787753 334444443
No 61
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=95.42 E-value=0.12 Score=46.41 Aligned_cols=89 Identities=10% Similarity=0.127 Sum_probs=61.5
Q ss_pred CCCeEEEEecCCCccccccc-ccc---CceeEeecCCchhHHHhhhhcCCCCEEEEEc---C--ChHHHHHHHHHHHhcC
Q 028115 12 AGLELVPVSFGTEEESGQKV-EVC---GKEIQVHGLSDRESVLASVFDKYPNMIVVDY---T--VPAAVNGNAELYSKVG 82 (213)
Q Consensus 12 ~~~elv~~~~~~~~~~g~~~-~~~---~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDF---S--~p~~~~~~~~~~~~~g 82 (213)
+++++|+.+ +...|+|+ ++. ..++++. +|++++++. .||.++|=- + .|+...+.+..|+++|
T Consensus 49 ~~~~iVgvi---~~~~Gkd~ge~~~g~~~gipv~--~d~~~al~~----~~d~lvig~a~~gg~l~~~~~~~I~~Al~~G 119 (350)
T 2g0t_A 49 RLFKPVCVV---AEHEGKMASDFVKPVRYDVPVV--SSVEKAKEM----GAEVLIIGVSNPGGYLEEQIATLVKKALSLG 119 (350)
T ss_dssp SSEEEEEEE---SSCTTCBGGGTCC-CCSCCBEE--SSHHHHHHT----TCCEEEECCCSCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCeEEEEe---ecCCCCcHHHhhCCCCCCceee--CCHHHHHhc----CCCEEEEEecCCCCCCCHHHHHHHHHHHHcC
Confidence 679999999 33667777 332 2367775 588887742 589545533 2 5677889999999999
Q ss_pred CCEEEEcCCC--CHHHHHHHHHccCCcEE
Q 028115 83 VPFVMGTTGG--DRVRLHETIENSNVYAV 109 (213)
Q Consensus 83 ~~~ViGTTG~--~~~~~~~~~~~~~~~~v 109 (213)
+++|.|---+ +..++.+++++.++-++
T Consensus 120 ~nVvsglh~~l~~~pel~~~A~~~Gv~i~ 148 (350)
T 2g0t_A 120 MDVISGLHFKISQQTEFLKIAHENGTRII 148 (350)
T ss_dssp CEEEECCCC--CCHHHHHHHHHHHTCCEE
T ss_pred CcEEeCChhhhhCCHHHHHHHHHCCCEEE
Confidence 9999977664 24578787776544443
No 62
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=95.30 E-value=0.11 Score=45.04 Aligned_cols=117 Identities=12% Similarity=0.052 Sum_probs=74.2
Q ss_pred ChHH-HHHHHH-hCCCeEEEEecCCCccccccccccCcee-EeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHH
Q 028115 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~-i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v-~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~ 77 (213)
||+. .+.++. .++++|+++.++.++..-+-.. ..++ ..+ .|.++.+++ ..+| +|+=.|-+..=.+.+..
T Consensus 34 ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~--~~g~~~~y--~d~~ell~~---~~iD-aV~I~tP~~~H~~~~~~ 105 (350)
T 4had_A 34 IGRDNVVPAIQDAENCVVTAIASRDLTRAREMAD--RFSVPHAF--GSYEEMLAS---DVID-AVYIPLPTSQHIEWSIK 105 (350)
T ss_dssp HHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHH--HHTCSEEE--SSHHHHHHC---SSCS-EEEECSCGGGHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHH--HcCCCeee--CCHHHHhcC---CCCC-EEEEeCCCchhHHHHHH
Confidence 3543 455565 5789999998865532111111 0122 233 488887753 4678 66777777778899999
Q ss_pred HHhcCCCEEEE----cCCCCHHHHHHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 78 YSKVGVPFVMG----TTGGDRVRLHETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 78 ~~~~g~~~ViG----TTG~~~~~~~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
|+++|+++.+= +|=-..+++.++++++++.+.+..| |+-.+..+.+++
T Consensus 106 al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i 159 (350)
T 4had_A 106 AADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLI 159 (350)
T ss_dssp HHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHH
T ss_pred HHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhh
Confidence 99999998873 2222234566667777888888877 555555555544
No 63
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.06 E-value=0.094 Score=46.66 Aligned_cols=119 Identities=12% Similarity=-0.091 Sum_probs=73.3
Q ss_pred ChHHHHHHHH-hCCCeEEE-EecCCCccccccccccCcee---EeecCCchhHHHhhhh--cCCCCEEEEEcCChHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVP-VSFGTEEESGQKVEVCGKEI---QVHGLSDRESVLASVF--DKYPNMIVVDYTVPAAVNG 73 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~-~~~~~~~~~g~~~~~~~~~v---~i~~~~~~~~~l~~~~--~~~~d~VvIDFS~p~~~~~ 73 (213)
||+.-+.++. .++++|++ +.+..+... +.+ ....++ .++ .|.++.+++.. ...+| +|+-.|-+..=.+
T Consensus 26 ig~~h~~~~~~~~~~~lva~v~d~~~~~a-~~~-a~~~g~~~~~~~--~~~~~ll~~~~~~~~~vD-~V~i~tp~~~H~~ 100 (398)
T 3dty_A 26 IGYIHRCAALRDNTFVLVAGAFDIDPIRG-SAF-GEQLGVDSERCY--ADYLSMFEQEARRADGIQ-AVSIATPNGTHYS 100 (398)
T ss_dssp SHHHHHHHHHGGGSEEEEEEECCSSHHHH-HHH-HHHTTCCGGGBC--SSHHHHHHHHTTCTTCCS-EEEEESCGGGHHH
T ss_pred hHHHHHHHHhhCCCeEEEEEEeCCCHHHH-HHH-HHHhCCCcceee--CCHHHHHhcccccCCCCC-EEEECCCcHHHHH
Confidence 6777777776 56799998 455544211 111 000123 233 58888776421 02477 7888888888999
Q ss_pred HHHHHHhcCCCEEEEcC-CCCHH---HHHHHHHccCCcEEEccCh--hHHHHHHHHH
Q 028115 74 NAELYSKVGVPFVMGTT-GGDRV---RLHETIENSNVYAVISPQM--GKQVVAFLAA 124 (213)
Q Consensus 74 ~~~~~~~~g~~~ViGTT-G~~~~---~~~~~~~~~~~~~v~a~N~--SlGv~ll~~l 124 (213)
.+..|++.|+++++=-. ..+.+ ++.++++++++.+.+..|+ .-.+..+.++
T Consensus 101 ~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~ 157 (398)
T 3dty_A 101 ITKAALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVGVTYGYAGHQLIEQAREM 157 (398)
T ss_dssp HHHHHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHH
Confidence 99999999999888321 23444 4555566677888888774 4444444444
No 64
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=94.94 E-value=0.037 Score=47.31 Aligned_cols=104 Identities=9% Similarity=0.029 Sum_probs=69.3
Q ss_pred ChHH-HHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~-i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+. .++.+. .++++|+++.++.+....+-... .+++. ..|+++.++ .+| +|+-.|-+..-.+.+..|
T Consensus 17 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~--~~~~~--~~~~~~ll~-----~~D-~V~i~tp~~~h~~~~~~a 86 (308)
T 3uuw_A 17 IAQKAYLPILTKSERFEFVGAFTPNKVKREKICSD--YRIMP--FDSIESLAK-----KCD-CIFLHSSTETHYEIIKIL 86 (308)
T ss_dssp HHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHH--HTCCB--CSCHHHHHT-----TCS-EEEECCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHH--cCCCC--cCCHHHHHh-----cCC-EEEEeCCcHhHHHHHHHH
Confidence 5664 667666 47899999888765321111111 12333 257777653 678 889999999999999999
Q ss_pred HhcCCCEEEE-cCCCCHHHHH---HHHHccCCcEEEccCh
Q 028115 79 SKVGVPFVMG-TTGGDRVRLH---ETIENSNVYAVISPQM 114 (213)
Q Consensus 79 ~~~g~~~ViG-TTG~~~~~~~---~~~~~~~~~~v~a~N~ 114 (213)
++.|+++++= -.+.+.++.+ +++++.++.+.++-|+
T Consensus 87 l~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~ 126 (308)
T 3uuw_A 87 LNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMVGFNR 126 (308)
T ss_dssp HHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEECCGG
T ss_pred HHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEeecc
Confidence 9999998775 3445655544 4455566777777773
No 65
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=94.92 E-value=0.097 Score=48.25 Aligned_cols=119 Identities=13% Similarity=0.007 Sum_probs=75.5
Q ss_pred ChHHHHHHHH-h-CCCeEEEEecCCCccccccccccCc-eeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKVEVCGK-EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~-~-~~~elv~~~~~~~~~~g~~~~~~~~-~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~ 77 (213)
||+..++.+. . ++++|+++.+..+...-.-...-+. .+..+ .|.++++++ ..+| +|+-.|-+..-.+.+..
T Consensus 54 ~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~--~d~~ell~~---~~vD-~V~I~tp~~~H~~~~~~ 127 (479)
T 2nvw_A 54 VAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGF--DSLESFAQY---KDID-MIVVSVKVPEHYEVVKN 127 (479)
T ss_dssp HHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEE--SCHHHHHHC---TTCS-EEEECSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceee--CCHHHHhcC---CCCC-EEEEcCCcHHHHHHHHH
Confidence 4666777776 4 7899999888654221111111111 12243 477777643 3678 78888988889999999
Q ss_pred HHhcC------CCEEEEcC-CCCHHH---HHHHHHccC-CcEEEccC--hhHHHHHHHHHH
Q 028115 78 YSKVG------VPFVMGTT-GGDRVR---LHETIENSN-VYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 78 ~~~~g------~~~ViGTT-G~~~~~---~~~~~~~~~-~~~v~a~N--~SlGv~ll~~l~ 125 (213)
|++.| +++++=-. ..+.++ +.+++++++ +.+.++.| |+-.+..+.+++
T Consensus 128 al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i 188 (479)
T 2nvw_A 128 ILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQTIICLQGRKSPYIVRAKELI 188 (479)
T ss_dssp HHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEEEEECGGGGCHHHHHHHHHH
T ss_pred HHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEEeccccCHHHHHHHHHH
Confidence 99999 88888653 345544 445556666 77777766 555555555443
No 66
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=94.81 E-value=0.13 Score=44.38 Aligned_cols=117 Identities=8% Similarity=0.043 Sum_probs=74.6
Q ss_pred ChHHHHHHHH-hC--CCeEEEEecCCCccccccccccCcee-EeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHH
Q 028115 1 MGKAVIKAAD-AA--GLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 1 MG~~i~~~~~-~~--~~elv~~~~~~~~~~g~~~~~~~~~v-~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (213)
||+..++.+. .+ +++|+++.++.+....+-..- .++ ..+ .|.++.+++ ..+| +|+-.|-+..-.+.+.
T Consensus 13 ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~--~~~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~ 84 (334)
T 3ohs_X 13 ISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQK--HDIPKAY--GSYEELAKD---PNVE-VAYVGTQHPQHKAAVM 84 (334)
T ss_dssp HHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHH--HTCSCEE--SSHHHHHHC---TTCC-EEEECCCGGGHHHHHH
T ss_pred HHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHH--cCCCccc--CCHHHHhcC---CCCC-EEEECCCcHHHHHHHH
Confidence 5677777765 33 478999888654221111111 122 233 477887753 3678 7888898888999999
Q ss_pred HHHhcCCCEEEEcC-CCCHHHH---HHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 77 LYSKVGVPFVMGTT-GGDRVRL---HETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 77 ~~~~~g~~~ViGTT-G~~~~~~---~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
.|++.|+++++=-. ..+.++. .+++++.++.+..+.| |.-.+..+.+++
T Consensus 85 ~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i 139 (334)
T 3ohs_X 85 LCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVL 139 (334)
T ss_dssp HHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHH
T ss_pred HHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHH
Confidence 99999999888654 4555544 4445556677777766 555555555544
No 67
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=94.64 E-value=0.11 Score=40.23 Aligned_cols=101 Identities=13% Similarity=0.051 Sum_probs=66.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+.|+++.. +++.. .|+.+ .|++++. ++++ +. ..+| ++|=|+.|+.+.+.++.|.+
T Consensus 28 ~G~~~~~~L~~~G~~v~~-vnp~~--~g~~i----~G~~~~~--sl~e----l~-~~~D-lvii~vp~~~v~~v~~~~~~ 92 (145)
T 2duw_A 28 PSYRVMKYLLDQGYHVIP-VSPKV--AGKTL----LGQQGYA--TLAD----VP-EKVD-MVDVFRNSEAAWGVAQEAIA 92 (145)
T ss_dssp HHHHHHHHHHHHTCCEEE-ECSSS--TTSEE----TTEECCS--STTT----CS-SCCS-EEECCSCSTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEE-eCCcc--ccccc----CCeeccC--CHHH----cC-CCCC-EEEEEeCHHHHHHHHHHHHH
Confidence 688899888877888543 44322 12222 1345542 3333 21 3578 77778889999999999999
Q ss_pred cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHH
Q 028115 81 VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQV 118 (213)
Q Consensus 81 ~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv 118 (213)
.|++.|+-.+|-..+++.+++++.++.+ +-|| ++|+
T Consensus 93 ~g~~~i~i~~~~~~~~l~~~a~~~Gi~~-igpn-c~g~ 128 (145)
T 2duw_A 93 IGAKTLWLQLGVINEQAAVLAREAGLSV-VMDR-CPAI 128 (145)
T ss_dssp HTCCEEECCTTCCCHHHHHHHHTTTCEE-ECSC-CHHH
T ss_pred cCCCEEEEcCChHHHHHHHHHHHcCCEE-EcCC-eeeE
Confidence 9988777667655667777777666654 4577 6665
No 68
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=94.61 E-value=0.023 Score=52.55 Aligned_cols=113 Identities=10% Similarity=0.110 Sum_probs=74.2
Q ss_pred ChHHHHHHHH----------hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh-H
Q 028115 1 MGKAVIKAAD----------AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP-A 69 (213)
Q Consensus 1 MG~~i~~~~~----------~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p-~ 69 (213)
||+.+++.+. ..+++|+++.++.+... + .+.. +..++ .|+++.+++ ..+| +||+.|-+ +
T Consensus 21 VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~-~--~~~~-~~~~~--~d~~ell~d---~diD-vVve~tp~~~ 90 (444)
T 3mtj_A 21 VGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKA-E--ALAG-GLPLT--TNPFDVVDD---PEID-IVVELIGGLE 90 (444)
T ss_dssp HHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHH-H--HHHT-TCCEE--SCTHHHHTC---TTCC-EEEECCCSST
T ss_pred HHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHh-h--hhcc-cCccc--CCHHHHhcC---CCCC-EEEEcCCCch
Confidence 4666665543 16899999888654211 1 1111 12333 477776643 3567 89999985 8
Q ss_pred HHHHHHHHHHhcCCCEEEEcCCCCHH---HHHHHHHccCCcEEEccChhHHHHHHHH
Q 028115 70 AVNGNAELYSKVGVPFVMGTTGGDRV---RLHETIENSNVYAVISPQMGKQVVAFLA 123 (213)
Q Consensus 70 ~~~~~~~~~~~~g~~~ViGTTG~~~~---~~~~~~~~~~~~~v~a~N~SlGv~ll~~ 123 (213)
...+++..|+++|+++|+.-.+.+.+ ++.+++++.++.+.+-++..-|.-++..
T Consensus 91 ~h~~~~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l~~Ea~V~~giPii~~ 147 (444)
T 3mtj_A 91 PARELVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAVAGGIPIIKA 147 (444)
T ss_dssp THHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCHHHH
T ss_pred HHHHHHHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeEEEEEeeeCChHHHHH
Confidence 89999999999999999987765543 4566666677777776665555555443
No 69
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=94.55 E-value=0.059 Score=47.76 Aligned_cols=86 Identities=17% Similarity=0.154 Sum_probs=54.6
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHh-----------hhhcCCCCEEEEEcCCh
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLA-----------SVFDKYPNMIVVDYTVP 68 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~-----------~~~~~~~d~VvIDFS~p 68 (213)
||+.+++.+. .++++|++..+..+......+.- .+++++...+.++.+. ++. ..+| +++++|-+
T Consensus 12 iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~--~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~-~~vD-vV~~aTp~ 87 (340)
T 1b7g_O 12 IGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHR--RGIRIYVPQQSIKKFEESGIPVAGTVEDLI-KTSD-IVVDTTPN 87 (340)
T ss_dssp HHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHH--TTCCEECCGGGHHHHHTTTCCCCCCHHHHH-HHCS-EEEECCST
T ss_pred HHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHh--cCcceecCcCHHHHhcccccccccCHhHhh-cCCC-EEEECCCC
Confidence 6999999987 68999999887543221111100 0122322112222121 111 1478 89999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEcC
Q 028115 69 AAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~~~ViGTT 90 (213)
....++.+.+++.|+++|.=+.
T Consensus 88 ~~s~~~a~~~~~aG~kvV~~sa 109 (340)
T 1b7g_O 88 GVGAQYKPIYLQLQRNAIFQGG 109 (340)
T ss_dssp THHHHHHHHHHHTTCEEEECTT
T ss_pred chhHHHHHHHHHcCCeEEEeCC
Confidence 9999999999999999888543
No 70
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=94.50 E-value=0.1 Score=46.96 Aligned_cols=119 Identities=17% Similarity=0.084 Sum_probs=73.5
Q ss_pred ChHHHHHHHH-hCCCeEEE-EecCCCccccccccccCcee---EeecCCchhHHHhhhhc--CCCCEEEEEcCChHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVP-VSFGTEEESGQKVEVCGKEI---QVHGLSDRESVLASVFD--KYPNMIVVDYTVPAAVNG 73 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~-~~~~~~~~~g~~~~~~~~~v---~i~~~~~~~~~l~~~~~--~~~d~VvIDFS~p~~~~~ 73 (213)
||+.-+.++. .++++|++ +.+..+...-+-.. ..++ .++ .|.++.+++... ..+| +|+-.|-+..-.+
T Consensus 51 ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~--~~g~~~~~~~--~~~~~ll~~~~~~~~~vD-~V~I~tp~~~H~~ 125 (417)
T 3v5n_A 51 IGAVHRIAARLDDHYELVAGALSSTPEKAEASGR--ELGLDPSRVY--SDFKEMAIREAKLKNGIE-AVAIVTPNHVHYA 125 (417)
T ss_dssp HHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHH--HHTCCGGGBC--SCHHHHHHHHHHCTTCCS-EEEECSCTTSHHH
T ss_pred HHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHH--HcCCCccccc--CCHHHHHhcccccCCCCc-EEEECCCcHHHHH
Confidence 4556666665 56799997 55554421111000 0122 233 578887764110 2478 7888898899999
Q ss_pred HHHHHHhcCCCEEEEcC-CCCHHH---HHHHHHccCCcEEEccCh--hHHHHHHHHH
Q 028115 74 NAELYSKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQM--GKQVVAFLAA 124 (213)
Q Consensus 74 ~~~~~~~~g~~~ViGTT-G~~~~~---~~~~~~~~~~~~v~a~N~--SlGv~ll~~l 124 (213)
.+..|++.|+++++=-. ..+.++ +.++++++++.+.+..|+ .-.+..+.++
T Consensus 126 ~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~ 182 (417)
T 3v5n_A 126 AAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVLTHNYTGYPMVRQAREM 182 (417)
T ss_dssp HHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEEECGGGGSHHHHHHHHH
T ss_pred HHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCCHHHHHHHHH
Confidence 99999999999988654 455554 445566667888888774 4444444443
No 71
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.29 E-value=0.047 Score=45.65 Aligned_cols=83 Identities=13% Similarity=0.109 Sum_probs=58.5
Q ss_pred ChHHHHHHHH--hCCCeEEEEecCCCc-cccc-cccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHH
Q 028115 1 MGKAVIKAAD--AAGLELVPVSFGTEE-ESGQ-KVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 1 MG~~i~~~~~--~~~~elv~~~~~~~~-~~g~-~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (213)
+|++++++.. ..+++++|.+|..+. ..|+ .+ . |+++.+.+++++.+++ ...| ++|-.+-.....+..+
T Consensus 95 lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i--~--GvpV~~~~dL~~~v~~---~~Id-~vIIAvPs~~aq~v~d 166 (212)
T 3keo_A 95 IGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTE--D--GIPVYGISTINDHLID---SDIE-TAILTVPSTEAQEVAD 166 (212)
T ss_dssp HHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCT--T--CCBEEEGGGHHHHC-C---CSCC-EEEECSCGGGHHHHHH
T ss_pred HHHHHHHhhhcccCCeEEEEEEeCCchhccCceeE--C--CeEEeCHHHHHHHHHH---cCCC-EEEEecCchhHHHHHH
Confidence 4778887743 568999999998877 7776 54 1 4566666777776543 4678 5555554455678999
Q ss_pred HHHhcCCCEEEEcCC
Q 028115 77 LYSKVGVPFVMGTTG 91 (213)
Q Consensus 77 ~~~~~g~~~ViGTTG 91 (213)
.|.+.|++-|.-=|-
T Consensus 167 ~lv~~GIk~I~nFap 181 (212)
T 3keo_A 167 ILVKAGIKGILSFSP 181 (212)
T ss_dssp HHHHHTCCEEEECSS
T ss_pred HHHHcCCCEEEEcCC
Confidence 999999998875443
No 72
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=94.10 E-value=0.84 Score=39.19 Aligned_cols=115 Identities=9% Similarity=0.042 Sum_probs=70.9
Q ss_pred HHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCC
Q 028115 4 AVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGV 83 (213)
Q Consensus 4 ~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~ 83 (213)
..++.+..++++|+++.+..+....+-...-+ +++.+ .|.++.+++ ..+| +|+-.|-+..-.+.+..|++.|+
T Consensus 19 ~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~-~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~al~aGk 91 (336)
T 2p2s_A 19 DMCQQLIDAGAELAGVFESDSDNRAKFTSLFP-SVPFA--ASAEQLITD---ASID-LIACAVIPCDRAELALRTLDAGK 91 (336)
T ss_dssp HHHHHHHHTTCEEEEEECSCTTSCHHHHHHST-TCCBC--SCHHHHHTC---TTCC-EEEECSCGGGHHHHHHHHHHTTC
T ss_pred HhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcC-CCccc--CCHHHHhhC---CCCC-EEEEeCChhhHHHHHHHHHHCCC
Confidence 34455556799999998866532211111000 12333 577776643 3578 77888888888999999999999
Q ss_pred CEEEEc-CCCCHHH---HHHHHHccCCcEEEccCh--hHH-HHHHHHHH
Q 028115 84 PFVMGT-TGGDRVR---LHETIENSNVYAVISPQM--GKQ-VVAFLAAM 125 (213)
Q Consensus 84 ~~ViGT-TG~~~~~---~~~~~~~~~~~~v~a~N~--SlG-v~ll~~l~ 125 (213)
++++=- -..+.++ +.+++++.++.+.+.-|+ .-. +..+.+++
T Consensus 92 hVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~~~~~i 140 (336)
T 2p2s_A 92 DFFTAKPPLTTLEQLDAVQRRVAETGRKFAVYFNERINVDSALFAGELV 140 (336)
T ss_dssp EEEECSSCCSCHHHHHHHHHHHHHHCCCEEECCTTTTTCHHHHHHHHHH
T ss_pred cEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCcHHHHHHHHHH
Confidence 988864 3345554 444555566777777664 322 54444443
No 73
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=94.00 E-value=0.078 Score=46.65 Aligned_cols=77 Identities=12% Similarity=0.031 Sum_probs=54.3
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcC-CCCHHH---HHHHHHccCCcEEEccC--hhHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQ--MGKQ 117 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTT-G~~~~~---~~~~~~~~~~~~v~a~N--~SlG 117 (213)
.|+++.+++ ..+| +|+..|-+..-.+.+..|+++|+++++=-. +.+.++ +.++++++++.+.++.| |.-.
T Consensus 73 ~~~~~ll~~---~~iD-~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~ 148 (383)
T 3oqb_A 73 TDLDAALAD---KNDT-MFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHGTVQDKLFLPG 148 (383)
T ss_dssp SCHHHHHHC---SSCC-EEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGSHH
T ss_pred CCHHHHhcC---CCCC-EEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCHH
Confidence 588887753 3578 789999999999999999999999886322 455554 44556666777778877 4544
Q ss_pred HHHHHHH
Q 028115 118 VVAFLAA 124 (213)
Q Consensus 118 v~ll~~l 124 (213)
+..+.++
T Consensus 149 ~~~~~~~ 155 (383)
T 3oqb_A 149 LKKIAFL 155 (383)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 74
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=93.85 E-value=0.36 Score=41.41 Aligned_cols=117 Identities=14% Similarity=0.113 Sum_probs=71.6
Q ss_pred ChH-HHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGK-AVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~-~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+ ..++.+. .++++|+ +.++.+....+-... .+++....+..+ .+ ...+| +|+-.|-|..-.+.+..|
T Consensus 13 ig~~~~~~~l~~~~~~~l~-v~d~~~~~~~~~a~~--~g~~~~~~~~~~-~l----~~~~D-~V~i~tp~~~h~~~~~~a 83 (323)
T 1xea_A 13 IAQKAYLPVLAQWPDIELV-LCTRNPKVLGTLATR--YRVSATCTDYRD-VL----QYGVD-AVMIHAATDVHSTLAAFF 83 (323)
T ss_dssp HHHHTHHHHHTTSTTEEEE-EECSCHHHHHHHHHH--TTCCCCCSSTTG-GG----GGCCS-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHHHH--cCCCccccCHHH-Hh----hcCCC-EEEEECCchhHHHHHHHH
Confidence 566 4777776 4689999 777654221111111 122210112222 23 13688 899999999999999999
Q ss_pred HhcCCCEEEEc-CCCCHHH---HHHHHHccCCcEEEccC--hhHHHHHHHHHHH
Q 028115 79 SKVGVPFVMGT-TGGDRVR---LHETIENSNVYAVISPQ--MGKQVVAFLAAME 126 (213)
Q Consensus 79 ~~~g~~~ViGT-TG~~~~~---~~~~~~~~~~~~v~a~N--~SlGv~ll~~l~~ 126 (213)
++.|+++++-. ...+.++ +.+++++.++.+..+.| |+-.+..+.++++
T Consensus 84 l~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~ 137 (323)
T 1xea_A 84 LHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSELA 137 (323)
T ss_dssp HHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHHCHHHH
T ss_pred HHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHHHHHHh
Confidence 99999998864 3455554 45555566777777766 4555655555543
No 75
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=93.73 E-value=0.1 Score=46.09 Aligned_cols=84 Identities=21% Similarity=0.299 Sum_probs=54.6
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCc----ccccc---c---------cccCceeEeecCCchhHHHhhhhcCCCCEEEE
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEE----ESGQK---V---------EVCGKEIQVHGLSDRESVLASVFDKYPNMIVV 63 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~----~~g~~---~---------~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvI 63 (213)
||+.+++.+. .++++|++..+..+. ..|++ + .+.+.++.+. .+.++.+ ..+| +++
T Consensus 12 iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~--~~~~~~~-----~~vD-vV~ 83 (337)
T 1cf2_P 12 VGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVA--GTVDDML-----DEAD-IVI 83 (337)
T ss_dssp THHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCC--EEHHHHH-----HTCS-EEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEc--CCHHHHh-----cCCC-EEE
Confidence 7999999988 589999998775432 12221 0 0000112221 1334333 2578 899
Q ss_pred EcCChHHHHHHHHHHHhcCCCEEEEcCCCC
Q 028115 64 DYTVPAAVNGNAELYSKVGVPFVMGTTGGD 93 (213)
Q Consensus 64 DFS~p~~~~~~~~~~~~~g~~~ViGTTG~~ 93 (213)
++|-+....++.+.+++.|+++|+ .++-.
T Consensus 84 ~atp~~~~~~~a~~~l~aG~~VId-~sp~~ 112 (337)
T 1cf2_P 84 DCTPEGIGAKNLKMYKEKGIKAIF-QGGEK 112 (337)
T ss_dssp ECCSTTHHHHHHHHHHHHTCCEEE-CTTSC
T ss_pred ECCCchhhHHHHHHHHHcCCEEEE-ecCCC
Confidence 999999999999999999998555 44433
No 76
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=93.72 E-value=0.38 Score=35.87 Aligned_cols=79 Identities=8% Similarity=0.058 Sum_probs=40.9
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcC--ChHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYT--VPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS--~p~~~~~~~~~ 77 (213)
+|+.+++.+. .++++++|.++..+...|..+ .++++.+.+++.+.+.+ ...|.|+|-.. .++...+.++.
T Consensus 15 ~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~i----~g~pV~g~~~l~~~~~~---~~id~viia~~~~~~~~~~~i~~~ 87 (141)
T 3nkl_A 15 AGLQLANMLRQGKEFHPIAFIDDDRKKHKTTM----QGITIYRPKYLERLIKK---HCISTVLLAVPSASQVQKKVIIES 87 (141)
T ss_dssp HHHHHHHHHHHSSSEEEEEEECSCGGGTTCEE----TTEEEECGGGHHHHHHH---HTCCEEEECCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEECCcccCCCEe----cCeEEECHHHHHHHHHH---CCCCEEEEeCCCCCHHHHHHHHHH
Confidence 3778888887 568999999886553333221 13455433344443322 23442333221 23344455555
Q ss_pred HHhcCCCEE
Q 028115 78 YSKVGVPFV 86 (213)
Q Consensus 78 ~~~~g~~~V 86 (213)
|.++|+.+.
T Consensus 88 l~~~gv~v~ 96 (141)
T 3nkl_A 88 LAKLHVEVL 96 (141)
T ss_dssp HHTTTCEEE
T ss_pred HHHcCCeEE
Confidence 555555543
No 77
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=93.59 E-value=0.23 Score=41.29 Aligned_cols=107 Identities=15% Similarity=0.178 Sum_probs=65.9
Q ss_pred ChHHHHHHH-H-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChH-HHHHHHHH
Q 028115 1 MGKAVIKAA-D-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~-~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~ 77 (213)
||++++++. . ..++++++.+|..+...|+.+ . ++++...+++++.+. .. | ++| .+.|. ...+.++.
T Consensus 96 ~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i--~--gv~V~~~~dl~eli~----~~-D-~Vi-IAvPs~~~~ei~~~ 164 (215)
T 2vt3_A 96 LGTAFLHYNFTKNNNTKISMAFDINESKIGTEV--G--GVPVYNLDDLEQHVK----DE-S-VAI-LTVPAVAAQSITDR 164 (215)
T ss_dssp HHHHHHHCC------CCEEEEEESCTTTTTCEE--T--TEEEEEGGGHHHHCS----SC-C-EEE-ECSCHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHh--c--CCeeechhhHHHHHH----hC-C-EEE-EecCchhHHHHHHH
Confidence 588888853 3 578999999998776666554 1 245555567776553 23 7 444 55554 55789999
Q ss_pred HHhcCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHHHHH
Q 028115 78 YSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAM 125 (213)
Q Consensus 78 ~~~~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~ 125 (213)
|.+.|++.|+--+-.... ..+.-+|..-+++.....|...+
T Consensus 165 l~~aGi~~Ilnf~P~~l~-------vp~~v~v~~vdl~~~l~~l~~~~ 205 (215)
T 2vt3_A 165 LVALGIKGILNFTPARLN-------VPEHIRIHHIDLAVELQSLVYFL 205 (215)
T ss_dssp HHHTTCCEEEECSSCCCC-------CCTTSEEEECCHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEcCceecc-------CCCceEEEEeCcHHHHHHHHHHH
Confidence 999999988766654321 01124566777777655444433
No 78
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.28 E-value=0.5 Score=33.37 Aligned_cols=85 Identities=9% Similarity=0.006 Sum_probs=48.8
Q ss_pred ChHHHHHHHHhCC-CeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAG-LELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~~~~-~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+.+++.+.+.| .+++. +++.+..... +.-.+..+...+..+.+.. .+.. ..+| ++|..+-+......++.|.
T Consensus 16 iG~~~~~~l~~~g~~~v~~-~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~-~~~~-~~~d-~vi~~~~~~~~~~~~~~~~ 90 (118)
T 3ic5_A 16 IGQMIAALLKTSSNYSVTV-ADHDLAALAV-LNRMGVATKQVDAKDEAGL-AKAL-GGFD-AVISAAPFFLTPIIAKAAK 90 (118)
T ss_dssp HHHHHHHHHHHCSSEEEEE-EESCHHHHHH-HHTTTCEEEECCTTCHHHH-HHHT-TTCS-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEE-EeCCHHHHHH-HHhCCCcEEEecCCCHHHH-HHHH-cCCC-EEEECCCchhhHHHHHHHH
Confidence 6899999988778 77654 4544321110 0001111111122233332 2222 3578 7888888888888888888
Q ss_pred hcCCCEEEEcC
Q 028115 80 KVGVPFVMGTT 90 (213)
Q Consensus 80 ~~g~~~ViGTT 90 (213)
+.|++.+.-|+
T Consensus 91 ~~g~~~~~~~~ 101 (118)
T 3ic5_A 91 AAGAHYFDLTE 101 (118)
T ss_dssp HTTCEEECCCS
T ss_pred HhCCCEEEecC
Confidence 88888776443
No 79
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=93.18 E-value=0.18 Score=41.82 Aligned_cols=106 Identities=15% Similarity=0.056 Sum_probs=67.5
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+.++++.. ..+++++|.+|..+...|+.+ . ++++...+++++.++ + .+| ++|=-+-.....+.++.|.
T Consensus 91 ~G~~la~~~~~~~g~~iVg~~D~dp~k~g~~i--~--gv~V~~~~dl~ell~---~-~ID-~ViIA~Ps~~~~ei~~~l~ 161 (211)
T 2dt5_A 91 LGSALADYPGFGESFELRGFFDVDPEKVGRPV--R--GGVIEHVDLLPQRVP---G-RIE-IALLTVPREAAQKAADLLV 161 (211)
T ss_dssp HHHHHHHCSCCCSSEEEEEEEESCTTTTTCEE--T--TEEEEEGGGHHHHST---T-TCC-EEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHhHhhcCCcEEEEEEeCCHHHHhhhh--c--CCeeecHHhHHHHHH---c-CCC-EEEEeCCchhHHHHHHHHH
Confidence 5788887643 228999999997776656543 1 345544567776543 3 578 4444444444568999999
Q ss_pred hcCCCEEEEcCCCCHHHHHHHHHccCCc---EEEccChhHHHHHHHHHH
Q 028115 80 KVGVPFVMGTTGGDRVRLHETIENSNVY---AVISPQMGKQVVAFLAAM 125 (213)
Q Consensus 80 ~~g~~~ViGTTG~~~~~~~~~~~~~~~~---~v~a~N~SlGv~ll~~l~ 125 (213)
+.|++.|+--+-.. -.+| +|...+++.....|...+
T Consensus 162 ~aGi~~Ilnf~P~~----------l~vp~~v~v~~vdl~~~l~~l~~~~ 200 (211)
T 2dt5_A 162 AAGIKGILNFAPVV----------LEVPKEVAVENVDFLAGLTRLSFAI 200 (211)
T ss_dssp HHTCCEEEECSSSC----------CCCCTTSEEEECCSHHHHHHHHHHH
T ss_pred HcCCCEEEECCccc----------ccCCCCcEEEecCHHHHHHHHHHHh
Confidence 99999887644432 1233 677888887755444433
No 80
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=93.08 E-value=0.17 Score=44.46 Aligned_cols=83 Identities=24% Similarity=0.323 Sum_probs=53.3
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccccccCc----------------eeEeecCCchhHHHhhhhcCCCCEEEE
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGK----------------EIQVHGLSDRESVLASVFDKYPNMIVV 63 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~~~~~----------------~v~i~~~~~~~~~l~~~~~~~~d~VvI 63 (213)
||+.+++++. .++++|++..+..++..+..+.-.|. ++.++ .+.++.+ ...| +|+
T Consensus 13 iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~--~d~~~l~-----~~vD-vV~ 84 (334)
T 2czc_A 13 IGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVA--GTLNDLL-----EKVD-IIV 84 (334)
T ss_dssp HHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCS--CBHHHHH-----TTCS-EEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEc--CcHHHhc-----cCCC-EEE
Confidence 6899999987 67899999887654332211110010 11222 3555544 2578 888
Q ss_pred EcCChHHHHHHHHHHHhcCCCEEEEcCCC
Q 028115 64 DYTVPAAVNGNAELYSKVGVPFVMGTTGG 92 (213)
Q Consensus 64 DFS~p~~~~~~~~~~~~~g~~~ViGTTG~ 92 (213)
+.|-+..-.+..+.+++.|+++++ ....
T Consensus 85 ~aTp~~~h~~~a~~~l~aGk~Vi~-sap~ 112 (334)
T 2czc_A 85 DATPGGIGAKNKPLYEKAGVKAIF-QGGE 112 (334)
T ss_dssp ECCSTTHHHHHHHHHHHHTCEEEE-CTTS
T ss_pred ECCCccccHHHHHHHHHcCCceEe-eccc
Confidence 888777778999999999998664 4333
No 81
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=92.91 E-value=1.2 Score=37.87 Aligned_cols=103 Identities=14% Similarity=0.045 Sum_probs=68.5
Q ss_pred ChHHHHHHHH----hCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHH
Q 028115 1 MGKAVIKAAD----AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 1 MG~~i~~~~~----~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (213)
||+..++.+. .++++|++..++.. ..+. .+++. .|.++.+++ ..+| +|+-.|-+..-.+.+.
T Consensus 18 iG~~~~~~l~~~~~~~~~~lvav~d~~~--~a~~-----~g~~~---~~~~ell~~---~~vD-~V~i~tp~~~H~~~~~ 83 (294)
T 1lc0_A 18 AGSVRLRDLKDPRSAAFLNLIGFVSRRE--LGSL-----DEVRQ---ISLEDALRS---QEID-VAYICSESSSHEDYIR 83 (294)
T ss_dssp HHHHHHHHHTSHHHHTTEEEEEEECSSC--CCEE-----TTEEB---CCHHHHHHC---SSEE-EEEECSCGGGHHHHHH
T ss_pred HHHHHHHHHhccccCCCEEEEEEECchH--HHHH-----cCCCC---CCHHHHhcC---CCCC-EEEEeCCcHhHHHHHH
Confidence 4666666654 36799999887542 1111 12332 477776642 3466 8888999999999999
Q ss_pred HHHhcCCCEEEEcC-CCCHHH---HHHHHHccCCcEEEccChhHH
Q 028115 77 LYSKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQMGKQ 117 (213)
Q Consensus 77 ~~~~~g~~~ViGTT-G~~~~~---~~~~~~~~~~~~v~a~N~SlG 117 (213)
.|+++|+++++=-. ..+.++ +.+++++.++.+..+.|+-..
T Consensus 84 ~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~~~~r~~ 128 (294)
T 1lc0_A 84 QFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEHVELLM 128 (294)
T ss_dssp HHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEECGGGGS
T ss_pred HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcc
Confidence 99999999988643 345544 444555667778888885543
No 82
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=92.64 E-value=0.48 Score=42.03 Aligned_cols=106 Identities=6% Similarity=-0.032 Sum_probs=67.3
Q ss_pred CCCeEEEEecCCCccccccccccCcee-EeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcC
Q 028115 12 AGLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 12 ~~~elv~~~~~~~~~~g~~~~~~~~~v-~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTT 90 (213)
++.+|+++.+..+...-+-.. ..++ ..+ .|.++.+++ .++| +|+-.|-+..=.+.+..|++.|+++.+=-.
T Consensus 57 ~~~elvav~d~~~~~a~~~a~--~~~~~~~y--~d~~~ll~~---~~vD-~V~I~tp~~~H~~~~~~al~aGkhVl~EKP 128 (412)
T 4gqa_A 57 KRPHLYALADQDQAMAERHAA--KLGAEKAY--GDWRELVND---PQVD-VVDITSPNHLHYTMAMAAIAAGKHVYCEKP 128 (412)
T ss_dssp SEEEEEEEECSSHHHHHHHHH--HHTCSEEE--SSHHHHHHC---TTCC-EEEECSCGGGHHHHHHHHHHTTCEEEEESC
T ss_pred CCeEEEEEEcCCHHHHHHHHH--HcCCCeEE--CCHHHHhcC---CCCC-EEEECCCcHHHHHHHHHHHHcCCCeEeecC
Confidence 367999988865532111111 0122 343 478887753 4678 677788888888999999999999887443
Q ss_pred -CCCHHH---HHHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 91 -GGDRVR---LHETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 91 -G~~~~~---~~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
..+.++ +.++++++++.+.+..| |+-.+..+.+++
T Consensus 129 ~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 169 (412)
T 4gqa_A 129 LAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQII 169 (412)
T ss_dssp SCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHHHHHH
Confidence 234444 45556666777777777 555555555544
No 83
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=92.61 E-value=0.99 Score=38.88 Aligned_cols=106 Identities=12% Similarity=0.014 Sum_probs=65.8
Q ss_pred CCCeEEEEecCCCccccccccccCcee-EeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcC
Q 028115 12 AGLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 12 ~~~elv~~~~~~~~~~g~~~~~~~~~v-~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTT 90 (213)
++.+|+++.+..++..-+-.. ..++ .++ .|.++.+++ .++| +|+=.|-+..=.+.+..|++.|+++.+=-.
T Consensus 55 ~~~~lvav~d~~~~~a~~~a~--~~g~~~~y--~d~~ell~~---~~iD-aV~IatP~~~H~~~a~~al~aGkhVl~EKP 126 (393)
T 4fb5_A 55 ERPRLVHLAEANAGLAEARAG--EFGFEKAT--ADWRALIAD---PEVD-VVSVTTPNQFHAEMAIAALEAGKHVWCEKP 126 (393)
T ss_dssp CCCEEEEEECC--TTHHHHHH--HHTCSEEE--SCHHHHHHC---TTCC-EEEECSCGGGHHHHHHHHHHTTCEEEECSC
T ss_pred CCcEEEEEECCCHHHHHHHHH--HhCCCeec--CCHHHHhcC---CCCc-EEEECCChHHHHHHHHHHHhcCCeEEEccC
Confidence 578999998865532111111 0122 233 588887753 4678 666677777788999999999999887433
Q ss_pred -CCCHH---HHHHHHHccCCcEEEccC--hhHHHHHHHHHH
Q 028115 91 -GGDRV---RLHETIENSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 91 -G~~~~---~~~~~~~~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
..+.+ ++.++++++++.+.+..| |+-.+..+.+++
T Consensus 127 la~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i 167 (393)
T 4fb5_A 127 MAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLV 167 (393)
T ss_dssp SCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHH
T ss_pred CcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHH
Confidence 23444 455556667788888877 454554444443
No 84
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=91.67 E-value=3.9 Score=31.96 Aligned_cols=80 Identities=15% Similarity=0.118 Sum_probs=49.1
Q ss_pred hhHHHhhhhcCCCCEEEEEcCC---hHHHHHHHHHHHhcC---CCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH--H
Q 028115 46 RESVLASVFDKYPNMIVVDYTV---PAAVNGNAELYSKVG---VPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK--Q 117 (213)
Q Consensus 46 ~~~~l~~~~~~~~d~VvIDFS~---p~~~~~~~~~~~~~g---~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl--G 117 (213)
.++.++...+.+||.|.+=++. .+.+.+.++.+.+.+ +++++|=.-. .++.+.+ +..++-.++.|+.++ .
T Consensus 58 ~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~-~~~~~~l-~~~G~d~v~~~~~~~~~~ 135 (161)
T 2yxb_A 58 PEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGTIP-IPDLEPL-RSLGIREIFLPGTSLGEI 135 (161)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEECCC-HHHHHHH-HHTTCCEEECTTCCHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCCCc-hhcHHHH-HHCCCcEEECCCCCHHHH
Confidence 3444455555689966666654 355677777777764 7888884433 3333333 345666788887754 5
Q ss_pred HHHHHHHHHH
Q 028115 118 VVAFLAAMEI 127 (213)
Q Consensus 118 v~ll~~l~~~ 127 (213)
+..+.++++.
T Consensus 136 ~~~~~~~~~~ 145 (161)
T 2yxb_A 136 IEKVRKLAEE 145 (161)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666666554
No 85
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=90.94 E-value=2.9 Score=29.49 Aligned_cols=72 Identities=10% Similarity=0.155 Sum_probs=44.6
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc---CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV---GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~---g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.++++..+....||.|++|...|.. -.+.++...+. ..+.|+-+|+.+.+...+..+ .++--++.-.++.
T Consensus 37 ~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~-~g~~~~l~kP~~~ 112 (132)
T 3lte_A 37 HNGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVT-EGADDYLEKPFDN 112 (132)
T ss_dssp SSHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHH-HTCCEEECSSCCH
T ss_pred CCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHH-hChHHHhhCCCCH
Confidence 456666666666689988999998863 34555555543 357777788877654434333 3444445545554
No 86
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=90.88 E-value=0.76 Score=41.10 Aligned_cols=86 Identities=17% Similarity=0.237 Sum_probs=58.8
Q ss_pred HhCCCeEEEEecCCCccccccc-cccC--ceeEeecCCchhHHHhhhhcCCCCEEEEEc-----CChHHHHHHHHHHHhc
Q 028115 10 DAAGLELVPVSFGTEEESGQKV-EVCG--KEIQVHGLSDRESVLASVFDKYPNMIVVDY-----TVPAAVNGNAELYSKV 81 (213)
Q Consensus 10 ~~~~~elv~~~~~~~~~~g~~~-~~~~--~~v~i~~~~~~~~~l~~~~~~~~d~VvIDF-----S~p~~~~~~~~~~~~~ 81 (213)
..++.++|+.++.. ..|+|+ ++.+ .+++++ .|++++++ ..||.++|=. -.|+...+.+..|++.
T Consensus 31 r~~~~~iVgvid~~--~~G~d~ge~~g~~~gipi~--~~l~~al~----~~~d~lvig~a~~gG~l~~~~~~~i~~Al~~ 102 (349)
T 2obn_A 31 RYSEAPIVAVIDRN--CAGQSLREITGIYRYVPIV--KSVEAALE----YKPQVLVIGIAPKGGGIPDDYWIELKTALQA 102 (349)
T ss_dssp HHCCSCEEEEECGG--GTTSCHHHHHCCCSCCCEE--SSHHHHGG----GCCSEEEECCCCCCC-SCGGGHHHHHHHHHT
T ss_pred hcCCCcEEEEEeCC--CCCCcHHHhcCCcCCCCcc--CCHHHHHh----CCCCEEEEEecCCCCCCCHHHHHHHHHHHHc
Confidence 35679999999854 456666 3333 367775 58888773 3689444444 1456788999999999
Q ss_pred CCCEEEEcCCC-C-HHHHHHHHHc
Q 028115 82 GVPFVMGTTGG-D-RVRLHETIEN 103 (213)
Q Consensus 82 g~~~ViGTTG~-~-~~~~~~~~~~ 103 (213)
|+.+|.|-=-+ + ..++.+++++
T Consensus 103 G~~Vvsglh~~l~~~pel~~~A~~ 126 (349)
T 2obn_A 103 GMSLVNGLHTPLANIPDLNALLQP 126 (349)
T ss_dssp TCEEEECSSSCCTTCHHHHHHCCT
T ss_pred CCcEEeCccchhhCCHHHHHHHHc
Confidence 99999986543 2 3467776655
No 87
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=90.37 E-value=0.13 Score=45.60 Aligned_cols=106 Identities=13% Similarity=0.084 Sum_probs=65.8
Q ss_pred ChHHHHHHHH-hC--------CCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChH-H
Q 028115 1 MGKAVIKAAD-AA--------GLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPA-A 70 (213)
Q Consensus 1 MG~~i~~~~~-~~--------~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~-~ 70 (213)
||+.+++.+. .+ +++|+++.++..... +.+ +... ++ +|.++.+ ..| |||+.|... .
T Consensus 14 VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~-~~~---~~~~-~~--~d~~~ll------~iD-vVve~t~~~~~ 79 (332)
T 2ejw_A 14 VGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP-RAI---PQEL-LR--AEPFDLL------EAD-LVVEAMGGVEA 79 (332)
T ss_dssp HHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC-CSS---CGGG-EE--SSCCCCT------TCS-EEEECCCCSHH
T ss_pred HHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh-hcc---Cccc-cc--CCHHHHh------CCC-EEEECCCCcHH
Confidence 5788888876 44 689999888654211 111 0011 11 2444433 578 899998755 5
Q ss_pred HHHHHHHHHhcCCCEEEEcCCCC---HHHHHHHHHccCCcEEEccChhHHHHHHH
Q 028115 71 VNGNAELYSKVGVPFVMGTTGGD---RVRLHETIENSNVYAVISPQMGKQVVAFL 122 (213)
Q Consensus 71 ~~~~~~~~~~~g~~~ViGTTG~~---~~~~~~~~~~~~~~~v~a~N~SlGv~ll~ 122 (213)
..++++.|+++|+++|+..-... .+++.++++++ .+++.++..-|+-++.
T Consensus 80 a~~~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~--~~~~Ea~vg~giPii~ 132 (332)
T 2ejw_A 80 PLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEG--LIYHEASVMAGTPALS 132 (332)
T ss_dssp HHHHHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT--CEECGGGTTTTSSSHH
T ss_pred HHHHHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC--CeEEEEEcccCCHHHH
Confidence 68899999999999999543332 23555555544 6777766666644333
No 88
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=89.73 E-value=1.5 Score=40.23 Aligned_cols=75 Identities=15% Similarity=0.041 Sum_probs=48.9
Q ss_pred hHHHHHHHHhCC-CeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 2 GKAVIKAADAAG-LELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 2 G~~i~~~~~~~~-~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
|+.+.+.+.+.| ..+. .+.+.. ..+ .|++++. ++++ +. ..+| ++|=|..|+.+.+.++.|.+
T Consensus 24 g~~v~~~l~~~g~~~v~-pVnP~~----~~i----~G~~~y~--sl~~----lp-~~~D-lavi~vp~~~~~~~v~e~~~ 86 (457)
T 2csu_A 24 GYEVFKNLKEYKKGKVY-PVNIKE----EEV----QGVKAYK--SVKD----IP-DEID-LAIIVVPKRFVKDTLIQCGE 86 (457)
T ss_dssp HHHHHHHHTTCCSSEEE-EECSSC----SEE----TTEECBS--STTS----CS-SCCS-EEEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEE-EECCCC----CeE----CCEeccC--CHHH----cC-CCCC-EEEEecCHHHHHHHHHHHHH
Confidence 677777777553 4444 344331 111 1456653 3333 21 2578 67779999999999999999
Q ss_pred cCCCE-EEEcCCCC
Q 028115 81 VGVPF-VMGTTGGD 93 (213)
Q Consensus 81 ~g~~~-ViGTTG~~ 93 (213)
.|++. |+=|.||.
T Consensus 87 ~Gi~~vv~~s~G~~ 100 (457)
T 2csu_A 87 KGVKGVVIITAGFG 100 (457)
T ss_dssp HTCCEEEECCCSST
T ss_pred cCCCEEEEecCCCC
Confidence 99995 55677884
No 89
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=89.24 E-value=3.5 Score=29.55 Aligned_cols=67 Identities=10% Similarity=0.155 Sum_probs=40.7
Q ss_pred CchhHHHhhhhc-CCCCEEEEEcCCh-HH-HHHHHHHHHh----cCCCEEEEcCCCCHHHHHHHHHccC-CcEEEc
Q 028115 44 SDRESVLASVFD-KYPNMIVVDYTVP-AA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSN-VYAVIS 111 (213)
Q Consensus 44 ~~~~~~l~~~~~-~~~d~VvIDFS~p-~~-~~~~~~~~~~----~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a 111 (213)
.+.+++++.+.. ..||.|++|+..| .. -.+.++...+ ..+|+|+-|.-.+.+...+..+ .+ ..++.-
T Consensus 36 ~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~-~g~~~~l~K 110 (140)
T 3lua_A 36 ENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALK-FKVSDYILK 110 (140)
T ss_dssp CSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHH-SCCSEEEES
T ss_pred CCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHH-cCCCEEEEC
Confidence 456666666666 6799889999998 42 4455555554 4677777655555554444433 44 334443
No 90
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=89.10 E-value=0.67 Score=40.38 Aligned_cols=86 Identities=16% Similarity=0.096 Sum_probs=56.4
Q ss_pred ChHHHHHHHH--hCCCeEEEEecCCCccccccc-cccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAAD--AAGLELVPVSFGTEEESGQKV-EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~--~~~~elv~~~~~~~~~~g~~~-~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~ 77 (213)
||+.+++.+. .+++++++..+..+...++.+ ... +++.. .++.++.+++.....+| ++++-|-++.-.++...
T Consensus 15 iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~--g~~~~-~~~~e~ll~~~~~~~iD-vV~~atp~~~h~~~a~~ 90 (312)
T 1nvm_B 15 IGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM--GVTTT-YAGVEGLIKLPEFADID-FVFDATSASAHVQNEAL 90 (312)
T ss_dssp HHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT--TCCEE-SSHHHHHHHSGGGGGEE-EEEECSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHc--CCCcc-cCCHHHHHhccCCCCCc-EEEECCChHHHHHHHHH
Confidence 5888888874 578999998886653323222 111 22221 24556655421112456 89999999999999999
Q ss_pred HHhc--CCCEEEEcC
Q 028115 78 YSKV--GVPFVMGTT 90 (213)
Q Consensus 78 ~~~~--g~~~ViGTT 90 (213)
|+++ |+.+++=+.
T Consensus 91 al~a~~Gk~Vi~ekp 105 (312)
T 1nvm_B 91 LRQAKPGIRLIDLTP 105 (312)
T ss_dssp HHHHCTTCEEEECST
T ss_pred HHHhCCCCEEEEcCc
Confidence 9999 999887444
No 91
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=88.79 E-value=5 Score=28.67 Aligned_cols=74 Identities=9% Similarity=0.087 Sum_probs=44.5
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChH---HHHHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHH
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPA---AVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~---~~~~~~~~~~~~--g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlG 117 (213)
..+.+++++.+....||.|++|...|. .-.+.++...+. .+|+|+-|.--+.+...+.. ..+.--++.-.++..
T Consensus 36 ~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~-~~ga~~~l~KP~~~~ 114 (136)
T 3kto_A 36 FASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSSDIPTAVRAM-RASAADFIEKPFIEH 114 (136)
T ss_dssp ESSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHH-HTTCSEEEESSBCHH
T ss_pred eCCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHH-HcChHHheeCCCCHH
Confidence 356666666665566888899999988 455666666654 57777665555554443333 344333344345553
No 92
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=88.78 E-value=4.6 Score=28.69 Aligned_cols=82 Identities=5% Similarity=-0.004 Sum_probs=46.0
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh----cCCCEEEEcCCCCHHHHHHHHHccC-CcEEEccChhHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGKQ 117 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~N~SlG 117 (213)
.+.++++..+....||.|++|+..|.. -.+.++...+ ..+|+|+-|...+.+......+ .+ ..++.-| ++..
T Consensus 41 ~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l~kP-~~~~ 118 (143)
T 3cnb_A 41 YNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVA-LGAETCFGKP-LNFT 118 (143)
T ss_dssp CSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHH-TTCSEEEESS-CCHH
T ss_pred CCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHh-cCCcEEEeCC-CCHH
Confidence 455666665555679988999998852 3455666555 3567776655555554444333 44 4444444 4432
Q ss_pred HHHHHHHHHHHH
Q 028115 118 VVAFLAAMEIMA 129 (213)
Q Consensus 118 v~ll~~l~~~aa 129 (213)
-|.+.++.+.
T Consensus 119 --~l~~~i~~~~ 128 (143)
T 3cnb_A 119 --LLEKTIKQLV 128 (143)
T ss_dssp --HHHHHHHHHH
T ss_pred --HHHHHHHHHH
Confidence 3334444443
No 93
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.05 E-value=6.9 Score=29.40 Aligned_cols=116 Identities=13% Similarity=0.002 Sum_probs=59.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHH-HHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA-ELYS 79 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~-~~~~ 79 (213)
||+.+++.+.+.|.+++. +++.+........-.+..+...+..+.+. +.+.....+| ++|..+........+ ..+.
T Consensus 30 iG~~la~~L~~~g~~V~v-id~~~~~~~~~~~~~g~~~~~~d~~~~~~-l~~~~~~~ad-~Vi~~~~~~~~~~~~~~~~~ 106 (155)
T 2g1u_A 30 LGSLIANLASSSGHSVVV-VDKNEYAFHRLNSEFSGFTVVGDAAEFET-LKECGMEKAD-MVFAFTNDDSTNFFISMNAR 106 (155)
T ss_dssp HHHHHHHHHHHTTCEEEE-EESCGGGGGGSCTTCCSEEEESCTTSHHH-HHTTTGGGCS-EEEECSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEE-EECCHHHHHHHHhcCCCcEEEecCCCHHH-HHHcCcccCC-EEEEEeCCcHHHHHHHHHHH
Confidence 588999988888888774 45443221110001111111111223322 3221113578 778877765554444 4444
Q ss_pred h-cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHH
Q 028115 80 K-VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFL 122 (213)
Q Consensus 80 ~-~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~ 122 (213)
+ ++...+++.+--. ...+.+. ..++. +++|....+-.+..
T Consensus 107 ~~~~~~~iv~~~~~~-~~~~~l~-~~G~~-vi~p~~~~a~~l~~ 147 (155)
T 2g1u_A 107 YMFNVENVIARVYDP-EKIKIFE-ENGIK-TICPAVLMIEKVKE 147 (155)
T ss_dssp HTSCCSEEEEECSSG-GGHHHHH-TTTCE-EECHHHHHHHHHHH
T ss_pred HHCCCCeEEEEECCH-HHHHHHH-HCCCc-EEcHHHHHHHHHHH
Confidence 4 5666666555322 2223343 36777 99999888755443
No 94
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.01 E-value=0.82 Score=37.75 Aligned_cols=88 Identities=16% Similarity=0.077 Sum_probs=56.3
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+.|+++|.++++.+........ ..++.+. .++++++ ..+| +||-.+.+..+.+.++.+.+
T Consensus 21 mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~--~~g~~~~--~~~~~~~-----~~~D-vvi~av~~~~~~~v~~~l~~ 90 (266)
T 3d1l_A 21 LATNLAKALYRKGFRIVQVYSRTEESARELAQ--KVEAEYT--TDLAEVN-----PYAK-LYIVSLKDSAFAELLQGIVE 90 (266)
T ss_dssp HHHHHHHHHHHHTCCEEEEECSSHHHHHHHHH--HTTCEEE--SCGGGSC-----SCCS-EEEECCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHH--HcCCcee--CCHHHHh-----cCCC-EEEEecCHHHHHHHHHHHHh
Confidence 78999998876688877777765422111101 0123332 3444432 2578 89999999888888876655
Q ss_pred ---cCCCEEEEcCCCCHHHHH
Q 028115 81 ---VGVPFVMGTTGGDRVRLH 98 (213)
Q Consensus 81 ---~g~~~ViGTTG~~~~~~~ 98 (213)
.+..+|..|||+..+.++
T Consensus 91 ~~~~~~ivv~~s~~~~~~~l~ 111 (266)
T 3d1l_A 91 GKREEALMVHTAGSIPMNVWE 111 (266)
T ss_dssp TCCTTCEEEECCTTSCGGGST
T ss_pred hcCCCcEEEECCCCCchHHHH
Confidence 566788888998865543
No 95
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=87.77 E-value=8.9 Score=30.73 Aligned_cols=73 Identities=8% Similarity=0.073 Sum_probs=47.4
Q ss_pred hHHHhhhhcCCCCEEEEEcCCh---HHHHHHHHHHHhcC----CCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHH
Q 028115 47 ESVLASVFDKYPNMIVVDYTVP---AAVNGNAELYSKVG----VPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVV 119 (213)
Q Consensus 47 ~~~l~~~~~~~~d~VvIDFS~p---~~~~~~~~~~~~~g----~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ 119 (213)
++.++.+...+||.|.+=++.+ ..+.+.++.+.+.+ +|+++|=.+++.+-. +.. -.-.|++|.+-++.
T Consensus 129 ~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~~~~~~~~----~~~-gad~~~~da~~av~ 203 (210)
T 1y80_A 129 GKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGAPLSQDFA----DEI-GADGYAPDAASATE 203 (210)
T ss_dssp HHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEESTTCCHHHH----HHH-TCSEECSSHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECCCCCHHHH----HHc-CCeEEECCHHHHHH
Confidence 4444444446899667766544 34666777776655 899999888875322 211 23489999998887
Q ss_pred HHHHH
Q 028115 120 AFLAA 124 (213)
Q Consensus 120 ll~~l 124 (213)
+..++
T Consensus 204 ~~~~l 208 (210)
T 1y80_A 204 LCRQL 208 (210)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 96
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=87.75 E-value=0.26 Score=43.32 Aligned_cols=72 Identities=13% Similarity=0.037 Sum_probs=52.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCH--HHHHHHHHccCCcEEEccChhHHHHHHHHHHHHHHHhc
Q 028115 57 YPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDR--VRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQF 132 (213)
Q Consensus 57 ~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~--~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~~~aa~~l 132 (213)
+.| +||.-.-|..-...++.|++.|+++|- +|+..+ .++.+.++++++.++...=|.-|+-=+ ++..+.+.+
T Consensus 77 ~~D-vVi~~~p~~~~~~v~~~~~~~g~~yvD-~s~~~~~~~~l~~~a~~~g~~~i~~~G~~PG~~~~--~a~~~~~~~ 150 (365)
T 3abi_A 77 EFE-LVIGALPGFLGFKSIKAAIKSKVDMVD-VSFMPENPLELRDEAEKAQVTIVFDAGFAPGLSNI--LMGRIFQEL 150 (365)
T ss_dssp TCS-EEEECCCGGGHHHHHHHHHHHTCEEEE-CCCCSSCGGGGHHHHHHTTCEEECCCBTTTBHHHH--HHHHHHHHS
T ss_pred CCC-EEEEecCCcccchHHHHHHhcCcceEe-eeccchhhhhhhhhhccCCceeeecCCCCCchHHH--HHHHHHHhc
Confidence 678 899988888888999999999999886 444332 346666777888899888888885332 234455554
No 97
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=87.65 E-value=6.2 Score=28.36 Aligned_cols=77 Identities=6% Similarity=0.128 Sum_probs=45.2
Q ss_pred eEeecCCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh----cCCCEEEEcCCCCHHHHHHHHHccC-CcEEEc
Q 028115 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSN-VYAVIS 111 (213)
Q Consensus 38 v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a 111 (213)
+.+....+.++++..+....||.|++|+..|.. -.+.++...+ ..+|+|+-|.-.+.+......+ .+ ..++.-
T Consensus 33 ~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~-~g~~~~l~k 111 (147)
T 2zay_A 33 FDIIQCGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLD-MGFIDFIAK 111 (147)
T ss_dssp EEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHH-HTCSEEEES
T ss_pred CeEEEeCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHh-CCCCEEEeC
Confidence 344344567777666655679988999988852 3455665554 4578777666555554443333 34 344443
Q ss_pred cChhH
Q 028115 112 PQMGK 116 (213)
Q Consensus 112 ~N~Sl 116 (213)
.++.
T Consensus 112 -p~~~ 115 (147)
T 2zay_A 112 -PVNA 115 (147)
T ss_dssp -SCCH
T ss_pred -CCCH
Confidence 3443
No 98
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=86.99 E-value=6.4 Score=27.85 Aligned_cols=68 Identities=18% Similarity=0.212 Sum_probs=39.9
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCCh-H-HHHHHHHHHHh-cCCCEEEEcCCCCHHHHHHHHHccC-CcEEEcc
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVP-A-AVNGNAELYSK-VGVPFVMGTTGGDRVRLHETIENSN-VYAVISP 112 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p-~-~~~~~~~~~~~-~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~ 112 (213)
.+.++++..+....||.|++|...| . .-.+.++...+ ..+|+|+-|.-.+.+...... ..+ ..++.-|
T Consensus 41 ~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~kp 112 (140)
T 3cg0_A 41 DNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQDVETFQRAK-RVNPFGYLAKP 112 (140)
T ss_dssp SSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCCHHHHHHHH-TTCCSEEEEES
T ss_pred CCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHH-hcCCCEEEeCC
Confidence 4556666655556799889999886 2 33344444333 578888877666655444433 344 3444433
No 99
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=86.87 E-value=1.1 Score=41.55 Aligned_cols=73 Identities=8% Similarity=-0.088 Sum_probs=50.8
Q ss_pred eeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHccC-Cc-EEEccCh
Q 028115 37 EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSN-VY-AVISPQM 114 (213)
Q Consensus 37 ~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~~~~~~~-~~-~v~a~N~ 114 (213)
+++++. ...++.+ + ...+| +.|=|.-++.+.+.++.|.+.|+++||=|.||..+..+++.+.++ .. -++-||-
T Consensus 20 ~~Pv~~--~~~~~~~-~-p~~~D-lavI~vPa~~v~~~v~e~~~~Gv~~viis~Gf~~~~~~~l~~~A~~~g~rliGPNc 94 (480)
T 3dmy_A 20 ALTQVR--RWDSACQ-K-LPDAN-LALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDC 94 (480)
T ss_dssp CCEEES--SHHHHHH-H-STTCC-EEEECSCHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHHTTCCEECSSC
T ss_pred CCcccc--hHHHHHh-c-CCCCC-EEEEecCHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCc
Confidence 466653 3344332 2 13578 899999999999999999999999999999998654444433332 22 3667887
No 100
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=86.80 E-value=6.9 Score=28.05 Aligned_cols=69 Identities=17% Similarity=0.152 Sum_probs=43.5
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh----cCCCEEEEcCCCCHHHHHHHHHccC-CcEEEcc
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSN-VYAVISP 112 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~ 112 (213)
..+.++++..+....||.|++|+..|.. -.+.++...+ ..+|+|+-|.-.+.+...+..+ .+ ..++.-|
T Consensus 37 ~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~-~ga~~~l~Kp 111 (144)
T 3kht_A 37 VDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMA-AGASSVVDKS 111 (144)
T ss_dssp ESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHH-TTCSEEEECC
T ss_pred ECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHH-cCCCEEEECC
Confidence 3466667766666779988999999874 4455655554 3578777666556655444433 44 4444444
No 101
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=86.74 E-value=0.63 Score=41.33 Aligned_cols=122 Identities=16% Similarity=0.149 Sum_probs=69.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+. .++. +.++..+...+.... ...+.+. ..+.++ ++++. ..+| +||.-+.+..-.+.++.|++
T Consensus 27 iG~~ia~~L~~~-~~V~-V~~R~~~~a~~la~~-~~~~~~d-~~~~~~-l~~ll-~~~D-vVIn~~P~~~~~~v~~a~l~ 99 (365)
T 2z2v_A 27 IGRAIAWDLKDE-FDVY-IGDVNNENLEKVKEF-ATPLKVD-ASNFDK-LVEVM-KEFE-LVIGALPGFLGFKSIKAAIK 99 (365)
T ss_dssp HHHHHHHHHTTT-SEEE-EEESCHHHHHHHTTT-SEEEECC-TTCHHH-HHHHH-TTCS-CEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CeEE-EEECCHHHHHHHHhh-CCeEEEe-cCCHHH-HHHHH-hCCC-EEEECCChhhhHHHHHHHHH
Confidence 688999888755 6654 445544221111110 0012221 123332 22222 2678 78888776666778899999
Q ss_pred cCCCEEEEcCCCCH--HHHHHHHHccCCcEEEccChhHHHHHHHHHHHHHHHhc
Q 028115 81 VGVPFVMGTTGGDR--VRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQF 132 (213)
Q Consensus 81 ~g~~~ViGTTG~~~--~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~~~aa~~l 132 (213)
.|+.+|- ++...+ .++.+.++++++.++....|.-|+.=++ +..+++.|
T Consensus 100 ~G~~~vD-~s~~~~~~~~l~~~Ak~aG~~~l~g~G~dPG~~~~~--a~~~~~~~ 150 (365)
T 2z2v_A 100 SKVDMVD-VSFMPENPLELRDEAEKAQVTIVFDAGFAPGLSNIL--MGRIFQEL 150 (365)
T ss_dssp TTCCEEE-CCCCSSCGGGGHHHHHHTTCEEECSCBTTTBHHHHH--HHHHHHHS
T ss_pred hCCeEEE-ccCCcHHHHHHHHHHHHcCCEEEECCCCcchHHHHH--HHHHHHhc
Confidence 9999887 333322 2456667777888887777777764332 33445445
No 102
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=86.66 E-value=7.7 Score=28.44 Aligned_cols=69 Identities=13% Similarity=0.176 Sum_probs=41.4
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh----cCCCEEEEcCCCCHHHHHHHHHccC-CcEEEcc
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSN-VYAVISP 112 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~ 112 (213)
..+.+++++.+....||.|++|...|.. -.+.++...+ ..+|+|+-|.-.+.+......+ .+ ..++.-|
T Consensus 37 ~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~-~g~~~~l~KP 111 (154)
T 3gt7_A 37 VRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLE-CGADDFITKP 111 (154)
T ss_dssp ESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHH-HCCSEEEESS
T ss_pred eCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHH-CCCCEEEeCC
Confidence 4567777776666779988999998853 3445555554 3567776555445544434333 34 3444443
No 103
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=86.38 E-value=1.6 Score=38.50 Aligned_cols=80 Identities=25% Similarity=0.280 Sum_probs=51.2
Q ss_pred ChHHHHHHHH-hCCCeEEEEecC--CCcc----------ccc------------cccccCceeEeecCCchhHH-Hhhhh
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFG--TEEE----------SGQ------------KVEVCGKEIQVHGLSDRESV-LASVF 54 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~--~~~~----------~g~------------~~~~~~~~v~i~~~~~~~~~-l~~~~ 54 (213)
|||.+.+++. .+++||++..++ .++. -|. .+.+.+..+.+....|+++. +.
T Consensus 14 IGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~dp~~l~w~--- 90 (337)
T 3e5r_O 14 IGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNPDEIPWA--- 90 (337)
T ss_dssp HHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCSCGGGCCHH---
T ss_pred HHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecCChHHcccc---
Confidence 5999999987 578999998773 1111 010 01112223444433355442 11
Q ss_pred cCCCCEEEEEcCChHHHHHHHHHHHhcCCC
Q 028115 55 DKYPNMIVVDYTVPAAVNGNAELYSKVGVP 84 (213)
Q Consensus 55 ~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~ 84 (213)
...+| +|++.|-.....+.++.+++.|++
T Consensus 91 ~~~vD-vV~eaTg~~~~~e~a~~~l~aGak 119 (337)
T 3e5r_O 91 EAGAE-YVVESTGVFTDKEKAAAHLKGGAK 119 (337)
T ss_dssp HHTCS-EEEECSSSCCSHHHHTHHHHTTCS
T ss_pred ccCCC-EEEECCCchhhHHHHHHHHHcCCC
Confidence 12578 899999999999999999999995
No 104
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=86.24 E-value=0.59 Score=43.61 Aligned_cols=81 Identities=12% Similarity=0.178 Sum_probs=52.1
Q ss_pred ChHHHHHHHH-hCCCe---EEEEecCCCccccccc-cccCc---eeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHH
Q 028115 1 MGKAVIKAAD-AAGLE---LVPVSFGTEEESGQKV-EVCGK---EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVN 72 (213)
Q Consensus 1 MG~~i~~~~~-~~~~e---lv~~~~~~~~~~g~~~-~~~~~---~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~ 72 (213)
||+.+++.+. ..+++ ++- ++.. ..+.++ ...+. .+.+. .+|.++.++.+... .| +||+-+.|....
T Consensus 24 VG~~va~lla~~~dv~~~~I~v-aD~~--~~~~~~~~~~g~~~~~~~Vd-adnv~~~l~aLl~~-~D-vVIN~s~~~~~l 97 (480)
T 2ph5_A 24 VGQALMPLIFEKFDIKPSQVTI-IAAE--GTKVDVAQQYGVSFKLQQIT-PQNYLEVIGSTLEE-ND-FLIDVSIGISSL 97 (480)
T ss_dssp HHHHHHHHHHHHBCCCGGGEEE-EESS--CCSCCHHHHHTCEEEECCCC-TTTHHHHTGGGCCT-TC-EEEECCSSSCHH
T ss_pred HHHHHHHHHHhCCCCceeEEEE-eccc--hhhhhHHhhcCCceeEEecc-chhHHHHHHHHhcC-CC-EEEECCccccCH
Confidence 6899999887 56663 442 2322 122222 11122 22232 34555656555543 58 899999999999
Q ss_pred HHHHHHHhcCCCEEE
Q 028115 73 GNAELYSKVGVPFVM 87 (213)
Q Consensus 73 ~~~~~~~~~g~~~Vi 87 (213)
..+++|++.|+..+-
T Consensus 98 ~Im~acleaGv~YlD 112 (480)
T 2ph5_A 98 ALIILCNQKGALYIN 112 (480)
T ss_dssp HHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCCEEE
Confidence 999999999999876
No 105
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.21 E-value=8.3 Score=29.62 Aligned_cols=121 Identities=12% Similarity=-0.009 Sum_probs=64.0
Q ss_pred ChHHHHHHHHhC-CCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhh-hcCCCCEEEEEcCC-hHHHHHHHHH
Q 028115 1 MGKAVIKAADAA-GLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASV-FDKYPNMIVVDYTV-PAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~-~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~-~~~~~d~VvIDFS~-p~~~~~~~~~ 77 (213)
||+.+++.+.+. |++++. ++..+.... .+.-.+..+..-+..+.+ .+.+. ....+| ++|..+. ++.....+..
T Consensus 50 ~G~~~a~~L~~~~g~~V~v-id~~~~~~~-~~~~~g~~~~~gd~~~~~-~l~~~~~~~~ad-~vi~~~~~~~~~~~~~~~ 125 (183)
T 3c85_A 50 IGTGAYDELRARYGKISLG-IEIREEAAQ-QHRSEGRNVISGDATDPD-FWERILDTGHVK-LVLLAMPHHQGNQTALEQ 125 (183)
T ss_dssp HHHHHHHHHHHHHCSCEEE-EESCHHHHH-HHHHTTCCEEECCTTCHH-HHHTBCSCCCCC-EEEECCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCeEEE-EECCHHHHH-HHHHCCCCEEEcCCCCHH-HHHhccCCCCCC-EEEEeCCChHHHHHHHHH
Confidence 689999988877 888774 454432111 110011111111222333 23332 123578 6776554 4445555566
Q ss_pred HHhcC-CCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHHHHHHH
Q 028115 78 YSKVG-VPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAMEI 127 (213)
Q Consensus 78 ~~~~g-~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~~~ 127 (213)
+.+.+ ...|+..+ -+.+..+.+.+ .++-.+++|....|-.+...+++.
T Consensus 126 ~~~~~~~~~ii~~~-~~~~~~~~l~~-~G~~~vi~p~~~~a~~l~~~~~~~ 174 (183)
T 3c85_A 126 LQRRNYKGQIAAIA-EYPDQLEGLLE-SGVDAAFNIYSEAGSGFARHVCKQ 174 (183)
T ss_dssp HHHTTCCSEEEEEE-SSHHHHHHHHH-HTCSEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEEE-CCHHHHHHHHH-cCCCEEEchHHHHHHHHHHHHHHh
Confidence 66665 33444333 34444445543 477788999988887665555443
No 106
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=86.17 E-value=7.3 Score=27.75 Aligned_cols=69 Identities=7% Similarity=0.078 Sum_probs=39.3
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHccCCcEEEcc
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISP 112 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~ 112 (213)
..+.++++..+....||.|++|. .|.. -.+.++...+. .+|+|+-|.-.+.+......+..-..++.-|
T Consensus 34 ~~~~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP 105 (142)
T 2qxy_A 34 AKNEQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVDYILKP 105 (142)
T ss_dssp ESSHHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSCEEESS
T ss_pred ECCHHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcceeEeCC
Confidence 34666666666666799889999 7752 34455554443 4676665554455444443332224445443
No 107
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=85.98 E-value=5.5 Score=34.04 Aligned_cols=105 Identities=8% Similarity=-0.047 Sum_probs=62.4
Q ss_pred CCeEEEEecCCCccccccccccCcee-EeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcC-
Q 028115 13 GLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT- 90 (213)
Q Consensus 13 ~~elv~~~~~~~~~~g~~~~~~~~~v-~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTT- 90 (213)
+.+|+++.+..++..-+-..- .++ .++ .|.++.+++ .++| +|+=.|-+..=.+.+..|++.|+++.+=-.
T Consensus 37 ~~~l~av~d~~~~~a~~~a~~--~g~~~~~--~d~~~ll~~---~~iD-aV~I~tP~~~H~~~~~~al~aGkhVl~EKPl 108 (390)
T 4h3v_A 37 HPDLNVLCGRDAEAVRAAAGK--LGWSTTE--TDWRTLLER---DDVQ-LVDVCTPGDSHAEIAIAALEAGKHVLCEKPL 108 (390)
T ss_dssp EEEEEEEECSSHHHHHHHHHH--HTCSEEE--SCHHHHTTC---TTCS-EEEECSCGGGHHHHHHHHHHTTCEEEEESSS
T ss_pred CceEEEEEcCCHHHHHHHHHH--cCCCccc--CCHHHHhcC---CCCC-EEEEeCChHHHHHHHHHHHHcCCCceeecCc
Confidence 348999888654221111110 122 233 478887653 3678 667778778888999999999999887433
Q ss_pred CCCHHHHHHH---HH---ccCCcEEEccC--hhHHHHHHHHHH
Q 028115 91 GGDRVRLHET---IE---NSNVYAVISPQ--MGKQVVAFLAAM 125 (213)
Q Consensus 91 G~~~~~~~~~---~~---~~~~~~v~a~N--~SlGv~ll~~l~ 125 (213)
+.+.+|-++| .+ .+++.+.+..| |+-.+..+.+++
T Consensus 109 a~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~~~~k~~i 151 (390)
T 4h3v_A 109 ANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAIALARKLV 151 (390)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchHHHHHHHH
Confidence 2344444444 33 35677777777 454444444443
No 108
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=85.91 E-value=7.2 Score=27.38 Aligned_cols=72 Identities=13% Similarity=0.150 Sum_probs=42.0
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc----CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.+++++.+....||.|++|+..|.. -.+.++...+. .+|+|+=|.-.+.+...+. ...+.--++.-.|+.
T Consensus 33 ~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~-~~~Ga~~~l~KP~~~ 109 (122)
T 3gl9_A 33 ENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLA-LSLGARKVMRKPFSP 109 (122)
T ss_dssp SSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHH-HHTTCSEEEESSCCH
T ss_pred CCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCchHHHHHH-HhcChhhhccCCCCH
Confidence 455666666666679988999999863 34455555443 5777765554444443333 234544445445554
No 109
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=85.78 E-value=12 Score=30.21 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=30.3
Q ss_pred hhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcCC
Q 028115 51 ASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTG 91 (213)
Q Consensus 51 ~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG 91 (213)
..+....+|.++|--..++...+.++.+.+.|+|+|.--+.
T Consensus 55 ~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 95 (291)
T 3l49_A 55 QTLIAQKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTA 95 (291)
T ss_dssp HHHHHHCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEecCC
Confidence 33334578965666667778889999999999999885443
No 110
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=85.64 E-value=8 Score=27.69 Aligned_cols=72 Identities=14% Similarity=0.245 Sum_probs=41.3
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh----cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.+++++.+....||.|++|+..|.. -.+.++...+ ..+|+|+-|.-.+.+...+.. ..+.--++.-.|+.
T Consensus 35 ~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~-~~ga~~~l~KP~~~ 111 (136)
T 3t6k_A 35 ASGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGF-EAGANDYLAKPFEP 111 (136)
T ss_dssp SSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHH-HHTCSEEEETTCCH
T ss_pred CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHH-hcCcceEEeCCCCH
Confidence 455666665656679988999999863 3445555444 357877766655554433332 23433334434444
No 111
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=85.40 E-value=1.1 Score=39.37 Aligned_cols=88 Identities=19% Similarity=0.160 Sum_probs=55.4
Q ss_pred ChHHHHHHHH-hCCCeEEEEecC--CCcc----------ccc----------cccccCceeEeecCCchhHHHhhhhcCC
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFG--TEEE----------SGQ----------KVEVCGKEIQVHGLSDRESVLASVFDKY 57 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~--~~~~----------~g~----------~~~~~~~~v~i~~~~~~~~~l~~~~~~~ 57 (213)
+|+.+.+++. .++++|+++.++ .++. -|+ .+.+.+..+.+....|+++.- ..+..
T Consensus 14 iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~~l~--~~~~~ 91 (335)
T 1u8f_O 14 IGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSKIK--WGDAG 91 (335)
T ss_dssp HHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGGCC--TTTTT
T ss_pred HHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHHHCc--cccCC
Confidence 5899999987 789999998773 2211 010 111222334444434554420 11135
Q ss_pred CCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcCC
Q 028115 58 PNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTG 91 (213)
Q Consensus 58 ~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG 91 (213)
+| ++++-|-.....+.+..+++.|...|+-+..
T Consensus 92 vD-vV~eatg~~~~~e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 92 AE-YVVESTGVFTTMEKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp CC-EEEECSSSCCSHHHHGGGGGGTCSEEEESSC
T ss_pred CC-EEEECCCchhhHHHHHHHHhCCCeEEEeccC
Confidence 78 8898888888888889999999877776654
No 112
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=85.18 E-value=7.2 Score=27.24 Aligned_cols=72 Identities=18% Similarity=0.191 Sum_probs=39.2
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+-|.--+.+......+ .+.--++.-.++.
T Consensus 34 ~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~ga~~~l~Kp~~~ 108 (126)
T 1dbw_A 34 QSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMK-AGAVDFIEKPFED 108 (126)
T ss_dssp SCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHH-TTCSEEEESSCCH
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHH-hCHHHheeCCCCH
Confidence 344555555555578988999998852 3445555544 3577777655445444333333 3433333333444
No 113
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=84.81 E-value=8.6 Score=27.32 Aligned_cols=72 Identities=14% Similarity=0.227 Sum_probs=41.9
Q ss_pred CchhHHHhhhhc----------CCCCEEEEEcCChHH-HHHHHHHHHh----cCCCEEEEcCCCCHHHHHHHHHccCCcE
Q 028115 44 SDRESVLASVFD----------KYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYA 108 (213)
Q Consensus 44 ~~~~~~l~~~~~----------~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~~~ViGTTG~~~~~~~~~~~~~~~~~ 108 (213)
.+.+++++.+.. ..||.|++|+..|.. -.+.++...+ ..+|+|+-|...+.+......+ .++--
T Consensus 39 ~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~-~g~~~ 117 (149)
T 1k66_A 39 ITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYS-YSISS 117 (149)
T ss_dssp CSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHH-TTCSE
T ss_pred CCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHH-CCCCE
Confidence 466666665554 578988999998852 3455555555 3578877766555554444333 44333
Q ss_pred EEccChhH
Q 028115 109 VISPQMGK 116 (213)
Q Consensus 109 v~a~N~Sl 116 (213)
++.-.++.
T Consensus 118 ~l~kP~~~ 125 (149)
T 1k66_A 118 YIVKPLEI 125 (149)
T ss_dssp EEECCSSH
T ss_pred EEeCCCCH
Confidence 33333443
No 114
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=84.74 E-value=2 Score=38.29 Aligned_cols=118 Identities=14% Similarity=0.152 Sum_probs=69.0
Q ss_pred ChHHHHHHHH-h-CCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHH-----HHH
Q 028115 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-----VNG 73 (213)
Q Consensus 1 MG~~i~~~~~-~-~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~-----~~~ 73 (213)
||+.-++++. . +++||||+.++.++..-+-.. ..+++.+ .|.++.++ ++|.|+| ..|.. -.+
T Consensus 17 ~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~--~~gv~~~--~~~~~l~~-----~~D~v~i--~~p~~~h~~~~~~ 85 (372)
T 4gmf_A 17 FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAH--AFGIPLY--TSPEQITG-----MPDIACI--VVRSTVAGGAGTQ 85 (372)
T ss_dssp TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHH--HTTCCEE--SSGGGCCS-----CCSEEEE--CCC--CTTSHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHH--HhCCCEE--CCHHHHhc-----CCCEEEE--ECCCcccchhHHH
Confidence 5676666665 3 469999998876532111111 1145555 36666542 5783333 33333 378
Q ss_pred HHHHHHhcCCCEEEEcCCCCHHHHH---HHHHccCCcEEEccChh--HHHHHHHHHHHHHHH
Q 028115 74 NAELYSKVGVPFVMGTTGGDRVRLH---ETIENSNVYAVISPQMG--KQVVAFLAAMEIMAE 130 (213)
Q Consensus 74 ~~~~~~~~g~~~ViGTTG~~~~~~~---~~~~~~~~~~v~a~N~S--lGv~ll~~l~~~aa~ 130 (213)
..+.|++.|+++++=-. ++.+|.+ +++++.++.+.+..||- --+.-|.+.++.+.+
T Consensus 86 ~a~~al~aGkhVl~EKP-l~~~ea~~l~~~A~~~g~~~~v~~~yr~~p~vr~~i~~~~~l~~ 146 (372)
T 4gmf_A 86 LARHFLARGVHVIQEHP-LHPDDISSLQTLAQEQGCCYWINTFYPHTRAGRTWLRDAQQLRR 146 (372)
T ss_dssp HHHHHHHTTCEEEEESC-CCHHHHHHHHHHHHHHTCCEEEECSGGGSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEecC-CCHHHHHHHHHHHHHcCCEEEEcCcccCCHHHHHHHHHHHHHHh
Confidence 89999999999998777 7765544 45556677777777753 233334444444433
No 115
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=84.73 E-value=4.6 Score=28.15 Aligned_cols=72 Identities=13% Similarity=0.158 Sum_probs=39.0
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+-|.-.+.+......+..-...+.- .++.
T Consensus 34 ~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~K-P~~~ 108 (124)
T 1srr_A 34 ANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAK-PFDI 108 (124)
T ss_dssp SSHHHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCCEEES-SCCH
T ss_pred CCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccCchHHHHHHHhcChHhhccC-CCCH
Confidence 344555554444579988999998862 3444554443 3577776555444444433333222444443 3443
No 116
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=84.48 E-value=8.3 Score=26.87 Aligned_cols=72 Identities=14% Similarity=0.194 Sum_probs=40.1
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh-cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK-VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~-~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.+++++.+....||.|++|...|.. -.+.++...+ ..+|+|+-|+..+........ ..+.--++.-.++.
T Consensus 33 ~~~~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~~~~~~~~~-~~ga~~~l~KP~~~ 106 (120)
T 3f6p_A 33 HDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGL-EIGADDYVTKPFST 106 (120)
T ss_dssp SSHHHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSCHHHHHHHH-HTTCCEEEEESCCH
T ss_pred CCHHHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCChHHHHHHH-hCCcceeEcCCCCH
Confidence 355566665556679988999999863 2334444333 467777766555554433322 34433333334443
No 117
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=84.44 E-value=3.5 Score=37.98 Aligned_cols=65 Identities=14% Similarity=0.195 Sum_probs=51.6
Q ss_pred EEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHHHHHHHHHH
Q 028115 61 IVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAE 130 (213)
Q Consensus 61 VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~~~aa~ 130 (213)
+.|| ..|+.+..-++.+ +.+.|+|-..|+-+.+++-.++...+.|++..++ -++.+.++++.+.+
T Consensus 158 lsID-~dp~vleaale~~-~d~~pLIns~t~en~~~~~~la~~y~~~vV~~~~---~l~~l~~lv~~a~~ 222 (445)
T 2h9a_A 158 FILI-GTPEQLAAALETE-GANNPLLYAATADNYEQMVELAKKYNVPLTVSAK---GLDALAELVQKITA 222 (445)
T ss_dssp EEEE-SCHHHHHHHHHHH-GGGCCEEEEECTTTHHHHHHHHHHHTCCEEEECS---SHHHHHHHHHHHHH
T ss_pred EEEE-CCHHHHHHHHHhc-CCCCCEEEECCHHHHHHHHHHHHHhCCeEEEEcC---CHHHHHHHHHHHHH
Confidence 7888 8888888888776 3477889888998888888888888888877665 57778888877765
No 118
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=84.14 E-value=8.7 Score=26.87 Aligned_cols=72 Identities=14% Similarity=0.188 Sum_probs=43.2
Q ss_pred CchhHHHhhhhc-------CCCCEEEEEcCChH-HHHHHHHHHHh----cCCCEEEEcCCCCHHHHHHHHHccCCcEEEc
Q 028115 44 SDRESVLASVFD-------KYPNMIVVDYTVPA-AVNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYAVIS 111 (213)
Q Consensus 44 ~~~~~~l~~~~~-------~~~d~VvIDFS~p~-~~~~~~~~~~~----~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a 111 (213)
.+.++++..+.. ..||.|++|+..|. .-.+.++...+ ..+|+|+-|...+.+......+ .++--++.
T Consensus 35 ~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~-~g~~~~l~ 113 (140)
T 1k68_A 35 RDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYD-LHVNCYIT 113 (140)
T ss_dssp CSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHH-TTCSEEEE
T ss_pred CCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHH-hchhheec
Confidence 456666665544 47898899999885 23455565555 3578888777666655444333 34333344
Q ss_pred cChhH
Q 028115 112 PQMGK 116 (213)
Q Consensus 112 ~N~Sl 116 (213)
-.++.
T Consensus 114 kP~~~ 118 (140)
T 1k68_A 114 KSANL 118 (140)
T ss_dssp CCSSH
T ss_pred CCCCH
Confidence 34444
No 119
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=83.81 E-value=7.9 Score=27.03 Aligned_cols=52 Identities=12% Similarity=0.020 Sum_probs=33.1
Q ss_pred CchhHHHhhhhcC-CCCEEEEEcCChH--HHHHHHHHHHhc--CCCEEEEcCCCCHH
Q 028115 44 SDRESVLASVFDK-YPNMIVVDYTVPA--AVNGNAELYSKV--GVPFVMGTTGGDRV 95 (213)
Q Consensus 44 ~~~~~~l~~~~~~-~~d~VvIDFS~p~--~~~~~~~~~~~~--g~~~ViGTTG~~~~ 95 (213)
.+.++++..+... .||.|++|+..|+ .-.+.++...+. .+|+|+-|...+.+
T Consensus 36 ~~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~ 92 (132)
T 2rdm_A 36 SSGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHAALE 92 (132)
T ss_dssp SSHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSCCTT
T ss_pred CCHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCccHH
Confidence 4556666655555 6898899999885 345555555543 57777766554443
No 120
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=83.71 E-value=9.9 Score=27.17 Aligned_cols=66 Identities=14% Similarity=0.145 Sum_probs=38.3
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChH-HHHHHHHHHHhc-CCCEEEEcCCCCHHHHHHHHHccC-CcEEE
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV-GVPFVMGTTGGDRVRLHETIENSN-VYAVI 110 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~-g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~ 110 (213)
.+.++++..+....||.|++|+..|. .-.+.++...+. .+|+|+=|..-+.+......+ .+ ...+.
T Consensus 35 ~~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~~~~~~~~~~~-~ga~~~l~ 103 (136)
T 2qzj_A 35 YNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYINEDQSILNALN-SGGDDYLI 103 (136)
T ss_dssp SSHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCCHHHHHHHHH-TTCCEEEE
T ss_pred CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCCCHHHHHHHHH-cCCcEEEE
Confidence 45555555555567898899999885 234455555443 677777665555544433333 34 34443
No 121
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.56 E-value=10 Score=27.16 Aligned_cols=69 Identities=12% Similarity=0.205 Sum_probs=39.5
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHccC-CcEEEcc
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSN-VYAVISP 112 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~ 112 (213)
..+.++++..+....||.|++|+..|.. -.+.++...+ ..+|+|+-|...+.+......+ .+ ...+.-|
T Consensus 34 ~~~~~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~-~ga~~~l~KP 106 (137)
T 3cfy_A 34 VETGRDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHGSVDLAVNLIQ-KGAEDFLEKP 106 (137)
T ss_dssp ESSHHHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHH-TTCSEEEESS
T ss_pred eCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecCcHHHHHHHHH-CCccEEEeCC
Confidence 3456666665555679988999998852 3445555544 3566776655555544444333 34 3444433
No 122
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=83.22 E-value=12 Score=27.67 Aligned_cols=117 Identities=7% Similarity=-0.023 Sum_probs=59.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEc-CChHHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDY-TVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDF-S~p~~~~~~~~~~~ 79 (213)
||+.+++.+.+.|++++. ++..+..+. .+.-.+..+..-+..+.+ .+.+..-..+| ++|-. ..++.....+..+.
T Consensus 18 ~G~~la~~L~~~g~~v~v-id~~~~~~~-~~~~~g~~~i~gd~~~~~-~l~~a~i~~ad-~vi~~~~~~~~n~~~~~~a~ 93 (140)
T 3fwz_A 18 VGSLLGEKLLASDIPLVV-IETSRTRVD-ELRERGVRAVLGNAANEE-IMQLAHLECAK-WLILTIPNGYEAGEIVASAR 93 (140)
T ss_dssp HHHHHHHHHHHTTCCEEE-EESCHHHHH-HHHHTTCEEEESCTTSHH-HHHHTTGGGCS-EEEECCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEE-EECCHHHHH-HHHHcCCCEEECCCCCHH-HHHhcCcccCC-EEEEECCChHHHHHHHHHHH
Confidence 588999998888998875 454442211 110012212111222332 23332223578 44544 44444444444454
Q ss_pred hc--CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHHHH
Q 028115 80 KV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAA 124 (213)
Q Consensus 80 ~~--g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l 124 (213)
+. ++++|.=+ .+.+..+.+.+ .++-.+++|....+-.++..+
T Consensus 94 ~~~~~~~iiar~--~~~~~~~~l~~-~G~d~vi~p~~~~a~~i~~~l 137 (140)
T 3fwz_A 94 AKNPDIEIIARA--HYDDEVAYITE-RGANQVVMGEREIARTMLELL 137 (140)
T ss_dssp HHCSSSEEEEEE--SSHHHHHHHHH-TTCSEEEEHHHHHHHHHHHHH
T ss_pred HHCCCCeEEEEE--CCHHHHHHHHH-CCCCEEECchHHHHHHHHHHh
Confidence 43 34444322 33444455543 677788899888876665543
No 123
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=83.05 E-value=17 Score=32.97 Aligned_cols=122 Identities=10% Similarity=0.114 Sum_probs=63.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccc-cccCc-eeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKV-EVCGK-EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~-~~~~~-~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+.+++.+.+.|.+++ +.++......... ...+. .+.. +..+.++. .++. ..+| +||-.+.+..-......|
T Consensus 14 iG~~ia~~L~~~G~~V~-v~~R~~~~a~~la~~~~~~~~~~~-Dv~d~~~l-~~~l-~~~D-vVIn~a~~~~~~~i~~a~ 88 (450)
T 1ff9_A 14 VTRPTLDVLTDSGIKVT-VACRTLESAKKLSAGVQHSTPISL-DVNDDAAL-DAEV-AKHD-LVISLIPYTFHATVIKSA 88 (450)
T ss_dssp THHHHHHHHHTTTCEEE-EEESSHHHHHHTTTTCTTEEEEEC-CTTCHHHH-HHHH-TTSS-EEEECCC--CHHHHHHHH
T ss_pred HHHHHHHHHHhCcCEEE-EEECCHHHHHHHHHhcCCceEEEe-ecCCHHHH-HHHH-cCCc-EEEECCccccchHHHHHH
Confidence 69999999888888855 3454332111111 11111 1111 11233332 2222 2678 888888654444566778
Q ss_pred HhcCCCEEEEcCCCCHH--HHHHHHHccCCcEEEccChhHHH--HHHHHHHHHH
Q 028115 79 SKVGVPFVMGTTGGDRV--RLHETIENSNVYAVISPQMGKQV--VAFLAAMEIM 128 (213)
Q Consensus 79 ~~~g~~~ViGTTG~~~~--~~~~~~~~~~~~~v~a~N~SlGv--~ll~~l~~~a 128 (213)
++.|+.++. ++-+.+. .+.+.++++++.++...+|.-|+ .+..+++.++
T Consensus 89 l~~g~~vvd-~~~~~~~~~~l~~aA~~aGv~~i~g~g~~pg~~~~~a~~li~q~ 141 (450)
T 1ff9_A 89 IRQKKHVVT-TSYVSPAMMELDQAAKDAGITVMNEIGLDPGIDHLYAIKTIEEV 141 (450)
T ss_dssp HHHTCEEEE-SSCCCHHHHHTHHHHHHTTCEEECSCBBTTBHHHHHHHHHHHHH
T ss_pred HhCCCeEEE-eecccHHHHHHHHHHHHCCCeEEeCCCCcCchHHHHHHHHHHHh
Confidence 888877664 4434443 34455566677777777774444 3333444443
No 124
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=83.02 E-value=4.8 Score=33.51 Aligned_cols=89 Identities=16% Similarity=0.131 Sum_probs=50.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcC-ChHHHHHHHH---
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYT-VPAAVNGNAE--- 76 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS-~p~~~~~~~~--- 76 (213)
||+.+++.+.+.|+++. ++++.+.... . +...++.+. .+.++++. .+| +||-.+ .|..+...+.
T Consensus 15 ~G~~~a~~l~~~g~~V~-~~~~~~~~~~-~--~~~~g~~~~--~~~~~~~~-----~~D-~vi~~vp~~~~~~~v~~~~~ 82 (301)
T 3cky_A 15 MGKPMAINLLKEGVTVY-AFDLMEANVA-A--VVAQGAQAC--ENNQKVAA-----ASD-IIFTSLPNAGIVETVMNGPG 82 (301)
T ss_dssp THHHHHHHHHHTTCEEE-EECSSHHHHH-H--HHTTTCEEC--SSHHHHHH-----HCS-EEEECCSSHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHCCCeEE-EEeCCHHHHH-H--HHHCCCeec--CCHHHHHh-----CCC-EEEEECCCHHHHHHHHcCcc
Confidence 89999998887888876 4565432111 1 111133332 45555443 478 566665 5666666663
Q ss_pred ---HHHhcCCCEEEEcCCC--CHHHHHHHH
Q 028115 77 ---LYSKVGVPFVMGTTGG--DRVRLHETI 101 (213)
Q Consensus 77 ---~~~~~g~~~ViGTTG~--~~~~~~~~~ 101 (213)
.+++.+..+|.-+||. +.+++.+..
T Consensus 83 ~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~ 112 (301)
T 3cky_A 83 GVLSACKAGTVIVDMSSVSPSSTLKMAKVA 112 (301)
T ss_dssp CHHHHSCTTCEEEECCCCCHHHHHHHHHHH
T ss_pred hHhhcCCCCCEEEECCCCCHHHHHHHHHHH
Confidence 2344567777778887 334554443
No 125
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=82.96 E-value=15 Score=34.78 Aligned_cols=80 Identities=14% Similarity=0.203 Sum_probs=53.0
Q ss_pred hhHHHhhhhcCCCCEEEEEcCChHH---HHHHHHHHHhcC--CCEEEEcCCCCHHHHH-HHHHccCCcEEEccChhHHHH
Q 028115 46 RESVLASVFDKYPNMIVVDYTVPAA---VNGNAELYSKVG--VPFVMGTTGGDRVRLH-ETIENSNVYAVISPQMGKQVV 119 (213)
Q Consensus 46 ~~~~l~~~~~~~~d~VvIDFS~p~~---~~~~~~~~~~~g--~~~ViGTTG~~~~~~~-~~~~~~~~~~v~a~N~SlGv~ 119 (213)
.++.++.+...+||.|.+=++.... +.+.++.+.+.| +|+++|=..++.+.-+ ++.....-+.+|++|.+-++.
T Consensus 138 ~e~iv~aa~~~~~diVgLS~l~t~~~~~m~~~i~~Lr~~g~~i~ViVGGa~~~~~~a~~~i~p~~~GAD~ya~DA~~Av~ 217 (579)
T 3bul_A 138 AEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHTAVKIEQNYSGPTVYVQNASRTVG 217 (579)
T ss_dssp HHHHHHHHHHHTCSEEEEECCSTHHHHHHHHHHHHHHHTTCCSCEEEESTTCCHHHHHHHTGGGCSSCEEECCSHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEecCCCCHHHHHHHHHHHHHcCCCCeEEEEccccchhhhhhhhhhcccCCeEEECCHHHHHH
Confidence 3444444445689966777765543 445566666655 8999999888875432 232222247799999999998
Q ss_pred HHHHHH
Q 028115 120 AFLAAM 125 (213)
Q Consensus 120 ll~~l~ 125 (213)
+..+++
T Consensus 218 ~a~~l~ 223 (579)
T 3bul_A 218 VVAALL 223 (579)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 888776
No 126
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=82.80 E-value=8 Score=26.54 Aligned_cols=72 Identities=13% Similarity=0.167 Sum_probs=38.5
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.++++..+....||.+++|+..|.. -.+.++...+ ..+|+|+-|.--+.+......+ .+.--++.-.++.
T Consensus 31 ~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l~kp~~~ 105 (121)
T 2pl1_A 31 EDAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLS-AGADDYVTKPFHI 105 (121)
T ss_dssp SSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCCHHHHHHHHH-TTCSEEEESSCCH
T ss_pred CCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCCHHHHHHHHH-cCccceEECCCCH
Confidence 344555554445578988999998852 3344554444 3577777655444444333333 3432233333443
No 127
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=82.34 E-value=9.8 Score=31.29 Aligned_cols=40 Identities=5% Similarity=0.052 Sum_probs=30.3
Q ss_pred hhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcC
Q 028115 51 ASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 51 ~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTT 90 (213)
+.+....+|.+++.-..++...+.++.+.+.|+|+|+--+
T Consensus 52 ~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 91 (313)
T 3m9w_A 52 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 91 (313)
T ss_dssp HHHHHTTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESS
T ss_pred HHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECC
Confidence 3334457896677777777778899999999999997544
No 128
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=82.31 E-value=4.5 Score=31.87 Aligned_cols=83 Identities=17% Similarity=0.024 Sum_probs=49.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccC-----ceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCG-----KEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA 75 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~-----~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~ 75 (213)
||+.+++.+.+.|+++.. +++.+..........+ ..+.. .++++++. .+| +||-.+.|..+.+.+
T Consensus 12 ~G~~ia~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~D-~Vi~~~~~~~~~~~~ 81 (212)
T 1jay_A 12 LGKGLALRLATLGHEIVV-GSRREEKAEAKAAEYRRIAGDASITG---MKNEDAAE-----ACD-IAVLTIPWEHAIDTA 81 (212)
T ss_dssp HHHHHHHHHHTTTCEEEE-EESSHHHHHHHHHHHHHHHSSCCEEE---EEHHHHHH-----HCS-EEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHhccccccCCCCh---hhHHHHHh-----cCC-EEEEeCChhhHHHHH
Confidence 789999998888888774 4544321110000000 01221 34544442 478 889998888877766
Q ss_pred HHHHh--cCCCEEEEcCCCC
Q 028115 76 ELYSK--VGVPFVMGTTGGD 93 (213)
Q Consensus 76 ~~~~~--~g~~~ViGTTG~~ 93 (213)
+...+ .+..+|.-++|++
T Consensus 82 ~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 82 RDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHTHHHHTTSEEEECCCCEE
T ss_pred HHHHHHcCCCEEEEcCCCcC
Confidence 54322 3778888899887
No 129
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=82.18 E-value=12 Score=27.05 Aligned_cols=73 Identities=12% Similarity=0.121 Sum_probs=42.2
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh------cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChh
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK------VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMG 115 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~------~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~S 115 (213)
..+.+++++.+....||.|++|...|.. -.+.++...+ ..+|+|+-|+..+.+...+.. ..+.--++.-.++
T Consensus 44 ~~~~~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~~~~~~~~~~-~~Ga~~~l~KP~~ 122 (143)
T 3m6m_D 44 VNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACE-QAGARAFLAKPVV 122 (143)
T ss_dssp ESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCCCHHHHHHHH-HTTCSEEEESSCC
T ss_pred eCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCCCHHHHHHHH-HcChhheeeCCCC
Confidence 3566666666666679988999998863 2333443332 236777766656665544443 3443334444444
Q ss_pred H
Q 028115 116 K 116 (213)
Q Consensus 116 l 116 (213)
.
T Consensus 123 ~ 123 (143)
T 3m6m_D 123 A 123 (143)
T ss_dssp H
T ss_pred H
Confidence 4
No 130
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=81.84 E-value=13 Score=27.01 Aligned_cols=70 Identities=11% Similarity=0.155 Sum_probs=39.5
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHccCC-cEEEcc
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNV-YAVISP 112 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~~~~~~~~~~~~~~-~~v~a~ 112 (213)
..+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+-|..-+.+......+..++ .++.-|
T Consensus 37 ~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~kP 110 (154)
T 2rjn_A 37 FTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKISRFLLKP 110 (154)
T ss_dssp ESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTTCCSEEEESS
T ss_pred eCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhccchheeeeCC
Confidence 3566666766666678988999998852 33444444442 5676665544444444444333333 344433
No 131
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=81.83 E-value=3.9 Score=29.17 Aligned_cols=78 Identities=9% Similarity=0.050 Sum_probs=43.2
Q ss_pred eEeecCCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHccCCcEEEccCh
Q 028115 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQM 114 (213)
Q Consensus 38 v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~ 114 (213)
+.+....+.++++..+....||.|++|+..|.. -.+.++...+. .+|+|+-|.-.+.+...+..+ .+.--++.-.+
T Consensus 40 ~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l~KP~ 118 (135)
T 3snk_A 40 YDVRVSETDDFLKGPPADTRPGIVILDLGGGDLLGKPGIVEARALWATVPLIAVSDELTSEQTRVLVR-MNASDWLHKPL 118 (135)
T ss_dssp EEEEEECGGGGGGCCCTTCCCSEEEEEEETTGGGGSTTHHHHHGGGTTCCEEEEESCCCHHHHHHHHH-TTCSEEEESSC
T ss_pred eEEEEeccHHHHHHHHhccCCCEEEEeCCCCCchHHHHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHH-cCcHhhccCCC
Confidence 333334566666666656678988999998863 23344444443 577777555445544434333 44333444444
Q ss_pred hH
Q 028115 115 GK 116 (213)
Q Consensus 115 Sl 116 (213)
+.
T Consensus 119 ~~ 120 (135)
T 3snk_A 119 DG 120 (135)
T ss_dssp CH
T ss_pred CH
Confidence 44
No 132
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=81.59 E-value=13 Score=30.38 Aligned_cols=73 Identities=10% Similarity=0.051 Sum_probs=46.3
Q ss_pred hHHHhhhhcCCCCEEEE--EcCCh---HHHHHHHHHHHhcC----CCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHH
Q 028115 47 ESVLASVFDKYPNMIVV--DYTVP---AAVNGNAELYSKVG----VPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (213)
Q Consensus 47 ~~~l~~~~~~~~d~VvI--DFS~p---~~~~~~~~~~~~~g----~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlG 117 (213)
++.++...+.+||.|.+ =++.. ..+.+.++.+.+.+ +|+++|=..++++- ++.- -+-.|++|-+-+
T Consensus 133 e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~~~~~~~----a~~i-Gad~~~~dA~~a 207 (215)
T 3ezx_A 133 ENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGGAPVSDKW----IEEI-GADATAENAAEA 207 (215)
T ss_dssp HHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEESSSCCHHH----HHHH-TCCBCCSSHHHH
T ss_pred HHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEECCCCCHHH----HHHh-CCeEEECCHHHH
Confidence 44444455568996677 44333 23566777777764 68999988888542 2211 244789999988
Q ss_pred HHHHHHH
Q 028115 118 VVAFLAA 124 (213)
Q Consensus 118 v~ll~~l 124 (213)
+.+..++
T Consensus 208 v~~a~~l 214 (215)
T 3ezx_A 208 AKVALEV 214 (215)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 8765543
No 133
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=81.41 E-value=22 Score=29.59 Aligned_cols=70 Identities=16% Similarity=0.165 Sum_probs=46.3
Q ss_pred hhhhcCCCCEEEEEcCCh---HHHHHHHHHHHhcC--CCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHHHHH
Q 028115 51 ASVFDKYPNMIVVDYTVP---AAVNGNAELYSKVG--VPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAM 125 (213)
Q Consensus 51 ~~~~~~~~d~VvIDFS~p---~~~~~~~~~~~~~g--~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~ 125 (213)
+.+...+||.|.+=++.+ ..+.+.++.+.+.+ +|+++|=..++.+ +.+.- -+.+++++.+-.+.+..+++
T Consensus 168 ~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG~~~~~~----~~~~i-gad~~~~da~~av~~~~~l~ 242 (258)
T 2i2x_B 168 AAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGGGAVNQD----FVSQF-ALGVYGEEAADAPKIADAII 242 (258)
T ss_dssp HHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEESTTCCHH----HHHTS-TTEEECSSTTHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEECccCCHH----HHHHc-CCeEEECCHHHHHHHHHHHH
Confidence 333445899666666433 45667777776655 8999998888843 22222 25689999998876666554
No 134
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=80.54 E-value=7 Score=36.06 Aligned_cols=80 Identities=11% Similarity=0.113 Sum_probs=57.7
Q ss_pred hhHHHhhhhcCCCC-EEEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHHHH
Q 028115 46 RESVLASVFDKYPN-MIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAA 124 (213)
Q Consensus 46 ~~~~l~~~~~~~~d-~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l 124 (213)
+..++..+. ...| -++||=..|+++..-++.+. .+.|+|-+.|.-+-+++..++.+.+.|++..+| ..+.+.++
T Consensus 143 ~~~vVk~V~-e~~dvPL~IDS~dpevleaALea~a-~~~plI~sat~dn~e~m~~lAa~y~~pVi~~~~---dl~~lkel 217 (446)
T 4djd_C 143 FKAAVASVA-AATQLNLVLMADDPDVLKEALAGVA-DRKPLLYAATGANYEAMTALAKENNCPLAVYGN---GLEELAEL 217 (446)
T ss_dssp HHHHHHHHH-TTCCSEEEEECSCHHHHHHHHGGGG-GGCCEEEEECTTTHHHHHHHHHHTTCCEEEECS---SHHHHHHH
T ss_pred HHHHHHHHH-HhCCCCEEEecCCHHHHHHHHHhhc-CcCCeeEecchhhHHHHHHHHHHcCCcEEEEec---cHHHHHHH
Confidence 334444433 2455 36899888998888887764 467899998855566777888888899888777 67788888
Q ss_pred HHHHHH
Q 028115 125 MEIMAE 130 (213)
Q Consensus 125 ~~~aa~ 130 (213)
++.+.+
T Consensus 218 v~~a~~ 223 (446)
T 4djd_C 218 VDKIVA 223 (446)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777765
No 135
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=80.03 E-value=10 Score=27.46 Aligned_cols=68 Identities=13% Similarity=0.114 Sum_probs=38.6
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChH-HHHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHccC-CcEEEcc
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSN-VYAVISP 112 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~ 112 (213)
.+.++++..+....||.|++|+..|. .-.+.++...+ ..+|+|+-|...+.+......+ .+ ..++.-|
T Consensus 38 ~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~-~g~~~~l~kp 109 (153)
T 3cz5_A 38 ADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFE-AGASGYVTKS 109 (153)
T ss_dssp SSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHH-TTCSEEEETT
T ss_pred CCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHH-CCCcEEEecC
Confidence 45566666565667998899998874 23344554444 3577776655555444433333 44 3344433
No 136
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=80.02 E-value=14 Score=26.83 Aligned_cols=118 Identities=11% Similarity=-0.006 Sum_probs=59.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCC-hHHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTV-PAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~-p~~~~~~~~~~~ 79 (213)
+|+.+++.+.+.|++++. ++..+.... .+.-.+..+..-+..+.+. +.+.....+| ++|-.+. .+.-......+.
T Consensus 17 iG~~la~~L~~~g~~V~~-id~~~~~~~-~~~~~~~~~~~gd~~~~~~-l~~~~~~~~d-~vi~~~~~~~~n~~~~~~a~ 92 (141)
T 3llv_A 17 AGVGLVRELTAAGKKVLA-VDKSKEKIE-LLEDEGFDAVIADPTDESF-YRSLDLEGVS-AVLITGSDDEFNLKILKALR 92 (141)
T ss_dssp HHHHHHHHHHHTTCCEEE-EESCHHHHH-HHHHTTCEEEECCTTCHHH-HHHSCCTTCS-EEEECCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEE-EECCHHHHH-HHHHCCCcEEECCCCCHHH-HHhCCcccCC-EEEEecCCHHHHHHHHHHHH
Confidence 588999998888998875 454432111 1100111111112223332 3332223577 5555443 333444555555
Q ss_pred hcCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHHHH
Q 028115 80 KVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAA 124 (213)
Q Consensus 80 ~~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l 124 (213)
+.+.+.|+...- +.+..+.+. ..++-.+++|....|..+...+
T Consensus 93 ~~~~~~iia~~~-~~~~~~~l~-~~G~~~vi~p~~~~~~~l~~~i 135 (141)
T 3llv_A 93 SVSDVYAIVRVS-SPKKKEEFE-EAGANLVVLVADAVKQAFMDKI 135 (141)
T ss_dssp HHCCCCEEEEES-CGGGHHHHH-HTTCSEEEEHHHHHHHHHHHHH
T ss_pred HhCCceEEEEEc-ChhHHHHHH-HcCCCEEECHHHHHHHHHHHHH
Confidence 655554444332 222233343 3467788898888776555443
No 137
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=79.87 E-value=13 Score=26.33 Aligned_cols=74 Identities=11% Similarity=0.177 Sum_probs=45.4
Q ss_pred CCchhHHHhhhhc-----CCCCEEEEEcCChHH-HHHHHHHHHh------cCCCEEEEcCCCCHHHHHHHHHccCCcEEE
Q 028115 43 LSDRESVLASVFD-----KYPNMIVVDYTVPAA-VNGNAELYSK------VGVPFVMGTTGGDRVRLHETIENSNVYAVI 110 (213)
Q Consensus 43 ~~~~~~~l~~~~~-----~~~d~VvIDFS~p~~-~~~~~~~~~~------~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~ 110 (213)
..+.+++++.+.. ..||.|++|...|.. -.+.++...+ ..+|+|+-|...+.+......+..++--++
T Consensus 41 ~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l 120 (146)
T 3ilh_A 41 VTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYV 120 (146)
T ss_dssp ESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEE
T ss_pred cCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCcceee
Confidence 4566777666655 679988999998863 3445555444 456777666656665555544443245455
Q ss_pred ccChhH
Q 028115 111 SPQMGK 116 (213)
Q Consensus 111 a~N~Sl 116 (213)
.-.++.
T Consensus 121 ~KP~~~ 126 (146)
T 3ilh_A 121 SKPLTA 126 (146)
T ss_dssp CSSCCH
T ss_pred eCCCCH
Confidence 555665
No 138
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=79.80 E-value=15 Score=26.61 Aligned_cols=72 Identities=15% Similarity=0.254 Sum_probs=39.0
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChH-HHHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.++++..+....||.|++|...|. .-.+.++...+ ..+|+|+-|.-.+.+......+ .++--++.-.++.
T Consensus 34 ~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~-~g~~~~l~kP~~~ 108 (155)
T 1qkk_A 34 ASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQ-DGAYDFIAKPFAA 108 (155)
T ss_dssp SCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHH-TTCCEEEESSCCH
T ss_pred CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCChHHHHHHHh-cCCCeEEeCCCCH
Confidence 45566666555567898899998875 23344444443 3577776655444443333333 4433333333443
No 139
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=79.76 E-value=6.3 Score=34.60 Aligned_cols=89 Identities=21% Similarity=0.221 Sum_probs=56.2
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCC-cc--------------cc------ccccccCceeEeecCCchhHHHhhhhcCCC
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTE-EE--------------SG------QKVEVCGKEIQVHGLSDRESVLASVFDKYP 58 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~-~~--------------~g------~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~ 58 (213)
.|+.+.+++. .+++||+++.+... +. .| ..+.+.|..+.+....|+++. . ..+..+
T Consensus 12 iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~i-~-w~~~~v 89 (330)
T 1gad_O 12 IGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANL-K-WDEVGV 89 (330)
T ss_dssp HHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGGG-C-HHHHTC
T ss_pred HHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCChhhC-c-cccccC
Confidence 4899999987 68999998866321 10 01 111122333445543444432 0 001257
Q ss_pred CEEEEEcCChHHHHHHHHHHHhcCCCEEEEcCCC
Q 028115 59 NMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGG 92 (213)
Q Consensus 59 d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~ 92 (213)
| ++++-|-.....+..+..++.|.+.|+=+.-+
T Consensus 90 D-vVf~atg~~~s~e~a~~~l~~GakvVdlSa~~ 122 (330)
T 1gad_O 90 D-VVAEATGLFLTDETARKHITAGAKKVVMTGPS 122 (330)
T ss_dssp S-EEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred C-EEEECCCccccHHHHHHHHHCCCEEEEECCCC
Confidence 8 88888777778888888899999988877766
No 140
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=79.42 E-value=7.2 Score=34.44 Aligned_cols=89 Identities=18% Similarity=0.175 Sum_probs=56.5
Q ss_pred ChHHHHHHHH-h--CCCeEEEEecC-----------CCccccc-----------cccccCceeEeecCCchhHH-Hhhhh
Q 028115 1 MGKAVIKAAD-A--AGLELVPVSFG-----------TEEESGQ-----------KVEVCGKEIQVHGLSDRESV-LASVF 54 (213)
Q Consensus 1 MG~~i~~~~~-~--~~~elv~~~~~-----------~~~~~g~-----------~~~~~~~~v~i~~~~~~~~~-l~~~~ 54 (213)
.||.+.+++. . +++||++.-+. ..+..|+ .+.+.|..+.+....|+++. ..+
T Consensus 12 IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~dp~~i~w~~-- 89 (337)
T 1rm4_O 12 IGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGD-- 89 (337)
T ss_dssp HHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSCGGGSCHHH--
T ss_pred HHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecCChhhCcccc--
Confidence 4899999987 5 68999987641 1111111 11133444555544455432 111
Q ss_pred cCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCC
Q 028115 55 DKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGD 93 (213)
Q Consensus 55 ~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~ 93 (213)
..+| ++++.|-.....+..+..++.|.+.|+=+.-+.
T Consensus 90 -~gvD-iV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r 126 (337)
T 1rm4_O 90 -MGID-LVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGK 126 (337)
T ss_dssp -HTCC-EEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred -cCCC-EEEECCCchhhHHHHHHHHHcCCEEEEECCccc
Confidence 2578 889888777788888888899999888776653
No 141
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=79.16 E-value=14 Score=29.78 Aligned_cols=41 Identities=12% Similarity=0.109 Sum_probs=29.3
Q ss_pred HhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcC
Q 028115 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTT 90 (213)
+..+....+|.+|+--..++...+.++.+.+.|+|+|.--+
T Consensus 57 ~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~ 97 (293)
T 3l6u_A 57 ILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDR 97 (293)
T ss_dssp HHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCEEEecC
Confidence 33344457886666656677677888999999999987543
No 142
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=79.02 E-value=11 Score=26.37 Aligned_cols=72 Identities=11% Similarity=0.140 Sum_probs=40.4
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc----CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
..+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+-|.-.+.+. . -+...+.--++.-.++.
T Consensus 33 ~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~-~-~~~~~g~~~~l~KP~~~ 109 (133)
T 3nhm_A 33 AADGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTE-G-PADQPVPDAYLVKPVKP 109 (133)
T ss_dssp ESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-------TTSCCCSEEEESSCCH
T ss_pred ECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhH-H-HHhhcCCceEEeccCCH
Confidence 3566666666666789988999998863 44555555554 577776654333333 2 22233433344444554
No 143
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=78.98 E-value=8.7 Score=30.54 Aligned_cols=74 Identities=14% Similarity=0.110 Sum_probs=45.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.++|.+++....+.+. .+++..+++.....+ .+..|++.++.+...++..
T Consensus 17 iG~~~a~~l~~~G~~V~~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (247)
T 2hq1_A 17 LGKAIAWKLGNMGANIVLNGSPAST-------------------SLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTA 77 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCS-------------------HHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCcCHH-------------------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4889999988889988754233221 112211222111223 2457999999999888876
Q ss_pred Hhc--CCCEEEEcCCCC
Q 028115 79 SKV--GVPFVMGTTGGD 93 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~~ 93 (213)
.+. ++.+|+-..|..
T Consensus 78 ~~~~~~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 78 MDAFGRIDILVNNAGIT 94 (247)
T ss_dssp HHHHSCCCEEEECC---
T ss_pred HHhcCCCCEEEECCCCC
Confidence 654 788999888864
No 144
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=78.89 E-value=12 Score=25.54 Aligned_cols=71 Identities=13% Similarity=0.166 Sum_probs=38.9
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCCh-H-HHHHHHHHHHhc----CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVP-A-AVNGNAELYSKV----GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p-~-~~~~~~~~~~~~----g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.++++..+....||.|++|+..| . .-.+.++...+. .+|+|+- ...+.+..... ...++--++.-.++.
T Consensus 36 ~~~~~a~~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~-~~~~~~~~~~~-~~~g~~~~l~kp~~~ 112 (127)
T 2gkg_A 36 TDGKGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII-GNPDGFAQHRK-LKAHADEYVAKPVDA 112 (127)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE-ECGGGHHHHHH-STTCCSEEEESSCCH
T ss_pred cCHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE-ecCCchhHHHH-HHhCcchheeCCCCH
Confidence 4555555555555799889999988 4 234556655553 6777765 33333332222 234433344444444
No 145
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=78.87 E-value=14 Score=25.74 Aligned_cols=70 Identities=11% Similarity=0.147 Sum_probs=39.1
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHccCCcEEEcc
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISP 112 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~ 112 (213)
..+.++++..+....||.|++|+..|.. -.+.++...+. .+|+|+-|...+.+...+..+..-..++.-|
T Consensus 37 ~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP 109 (130)
T 3eod_A 37 AADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKP 109 (130)
T ss_dssp ESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEESC
T ss_pred eCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCC
Confidence 3466667776666679988999998863 23444444443 4777776665555544444333224455555
No 146
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=78.86 E-value=3.1 Score=36.90 Aligned_cols=112 Identities=15% Similarity=0.190 Sum_probs=60.3
Q ss_pred ChHHHHHHHH-hC---CCeEEEEecCCCccccccccccCceeEeec------------CCchhHHHhhhh-cCCCCEEEE
Q 028115 1 MGKAVIKAAD-AA---GLELVPVSFGTEEESGQKVEVCGKEIQVHG------------LSDRESVLASVF-DKYPNMIVV 63 (213)
Q Consensus 1 MG~~i~~~~~-~~---~~elv~~~~~~~~~~g~~~~~~~~~v~i~~------------~~~~~~~l~~~~-~~~~d~VvI 63 (213)
||+.+++.+. .+ +++|+++.+.....+.... . +++.+. ..+++.+++.+. ...+| |+|
T Consensus 15 VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~--~--gi~~~~~~~e~l~~~~~~~~did~v~e~~~~~~~~D-vVV 89 (358)
T 1ebf_A 15 VGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDF--S--PLNVGSDWKAALAASTTKTLPLDDLIAHLKTSPKPV-ILV 89 (358)
T ss_dssp HHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSC--S--CCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTCSSCE-EEE
T ss_pred HHHHHHHHHHhcCCCCCEEEEEEEECChhhhcccc--C--CCCccccHHHHHhcccCCCCCHHHHHHHhhhccCCc-EEE
Confidence 5888888887 43 5889988775332111100 0 111110 013333222110 01245 899
Q ss_pred EcCChHHHHHHHHHHHhcCCCEEEEcCC---CCHHHHHHHH--HccCCcEEEccChhHH
Q 028115 64 DYTVPAAVNGNAELYSKVGVPFVMGTTG---GDRVRLHETI--ENSNVYAVISPQMGKQ 117 (213)
Q Consensus 64 DFS~p~~~~~~~~~~~~~g~~~ViGTTG---~~~~~~~~~~--~~~~~~~v~a~N~SlG 117 (213)
|.|......+....|+++|+.+|+.--+ .+.++.++|. +++++.+.+-++..-|
T Consensus 90 ~~t~~~~~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~~A~~~gv~~~~Ea~vg~g 148 (358)
T 1ebf_A 90 DNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVYHEATVGAG 148 (358)
T ss_dssp ECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHTCCCTTCCCEECGGGTTTT
T ss_pred EcCCChHHHHHHHHHHHCCCeEEecCcccccCCHHHHHHHHHHHHcCCEEEEccccccC
Confidence 9997655555557899999999984333 3334444444 3344566666555544
No 147
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=78.44 E-value=15 Score=25.82 Aligned_cols=72 Identities=6% Similarity=0.025 Sum_probs=38.7
Q ss_pred CchhHHHhhhhcCC-CCEEEEEcCChHH-HHHHHHHHHhc---CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKY-PNMIVVDYTVPAA-VNGNAELYSKV---GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~-~d~VvIDFS~p~~-~~~~~~~~~~~---g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.++++..+.... ||.|++|...|.. -.+.++...+. .+|+|+-|.--+.+...+.. ..++--++.-.++.
T Consensus 38 ~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~KP~~~ 114 (136)
T 3hdv_A 38 DGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGDTDVEEAVDVM-HLGVVDFLLKPVDL 114 (136)
T ss_dssp SSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHH-HTTCSEEEESSCCH
T ss_pred CCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHH-hCCcceEEeCCCCH
Confidence 34555554444444 7888999998863 34555555554 35666555544554444433 34433334334554
No 148
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=78.42 E-value=13 Score=25.23 Aligned_cols=53 Identities=17% Similarity=0.256 Sum_probs=30.7
Q ss_pred chhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHH-hcCCCEEEEcCCCCHHHH
Q 028115 45 DRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYS-KVGVPFVMGTTGGDRVRL 97 (213)
Q Consensus 45 ~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~-~~g~~~ViGTTG~~~~~~ 97 (213)
+.++++..+....||.|++|+..|.. -.+.++... ...+|+|+-|+..+.+..
T Consensus 33 ~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~ 87 (120)
T 2a9o_A 33 NGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDSEFDK 87 (120)
T ss_dssp SHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCSHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCchHHH
Confidence 44444444444578988999988852 223333332 356787776665555443
No 149
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=78.35 E-value=7.9 Score=34.14 Aligned_cols=83 Identities=16% Similarity=0.171 Sum_probs=50.5
Q ss_pred ChHHHHHHHH-h--CCCeEEEEecCC-----------Cccccc----------cccccCceeEeecCCchhHHHhhhhcC
Q 028115 1 MGKAVIKAAD-A--AGLELVPVSFGT-----------EEESGQ----------KVEVCGKEIQVHGLSDRESVLASVFDK 56 (213)
Q Consensus 1 MG~~i~~~~~-~--~~~elv~~~~~~-----------~~~~g~----------~~~~~~~~v~i~~~~~~~~~l~~~~~~ 56 (213)
+||.+.+++. . +++++|+..+.. .+..|+ .+.+.+..+.+....|+++.. ..+.
T Consensus 13 IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~l~--w~~~ 90 (339)
T 3b1j_A 13 IGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRNPLNLP--WKEW 90 (339)
T ss_dssp HHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSCGGGSC--TTTT
T ss_pred HHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCChHHCc--cccc
Confidence 4899999987 5 779999875431 111111 111223345555444555421 1112
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHhcCCCEE
Q 028115 57 YPNMIVVDYTVPAAVNGNAELYSKVGVPFV 86 (213)
Q Consensus 57 ~~d~VvIDFS~p~~~~~~~~~~~~~g~~~V 86 (213)
.+| ++++.|-.....+....+++.|.+-|
T Consensus 91 ~vD-vV~e~tg~~~s~e~a~~~l~~GakkV 119 (339)
T 3b1j_A 91 DID-LVIESTGVFVTAEGASKHIQAGAKKV 119 (339)
T ss_dssp TCC-EEEECSSSCCBHHHHHHHHHTTCSEE
T ss_pred CCC-EEEECCCccccHHHHHHHHHcCCcEE
Confidence 578 89998877777888888888898844
No 150
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=78.32 E-value=11 Score=26.56 Aligned_cols=71 Identities=13% Similarity=0.015 Sum_probs=39.1
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCCH-HHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDR-VRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~~-~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.+++++.+....||.|++|+..|.. -.+.++...+. .+| |+-.|+... +...... ..++--++.-.++.
T Consensus 38 ~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~-ii~~s~~~~~~~~~~~~-~~g~~~~l~kP~~~ 112 (137)
T 3hdg_A 38 GDGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPY-VIVISAFSEMKYFIKAI-ELGVHLFLPKPIEP 112 (137)
T ss_dssp SSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCE-EEECCCCCCHHHHHHHH-HHCCSEECCSSCCH
T ss_pred CCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCc-EEEEecCcChHHHHHHH-hCCcceeEcCCCCH
Confidence 466666666656679988999998852 34445544443 345 555566553 3333332 34433344333443
No 151
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=78.23 E-value=9.3 Score=31.71 Aligned_cols=73 Identities=12% Similarity=0.216 Sum_probs=46.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++....+.. +..++..+++...... .+..|.|.++.+...++.+
T Consensus 41 IG~aia~~la~~G~~V~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 101 (280)
T 4da9_A 41 IGLGIARALAASGFDIAITGIGDA-------------------EGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAV 101 (280)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEEeCCCH-------------------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 478888888888888764321121 1122222222222233 2556999999999999988
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 102 ~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 102 VAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHSCCCEEEEECC-
T ss_pred HHHcCCCCEEEECCCc
Confidence 775 78899988886
No 152
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=78.21 E-value=7 Score=35.82 Aligned_cols=107 Identities=11% Similarity=0.147 Sum_probs=57.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCcccccccc-ccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh-HHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVE-VCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP-AAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~-~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p-~~~~~~~~~~ 78 (213)
||+.+++.+.+.|++|. ++++.+........ ..+.++.. ..+++++++++ ..+| +||=..-+ ..+.+.++..
T Consensus 26 MG~~lA~~La~~G~~V~-v~~r~~~~~~~l~~~~~~~gi~~--~~s~~e~v~~l--~~aD-vVil~Vp~~~~v~~vl~~l 99 (480)
T 2zyd_A 26 MGRNLALNIESRGYTVS-IFNRSREKTEEVIAENPGKKLVP--YYTVKEFVESL--ETPR-RILLMVKAGAGTDAAIDSL 99 (480)
T ss_dssp HHHHHHHHHHTTTCCEE-EECSSHHHHHHHHHHSTTSCEEE--CSSHHHHHHTB--CSSC-EEEECSCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEE-EEeCCHHHHHHHHhhCCCCCeEE--eCCHHHHHhCC--CCCC-EEEEECCCHHHHHHHHHHH
Confidence 89999999988899876 45654422111111 10113333 34666655432 2478 45544444 4677777655
Q ss_pred Hh---cCCCEEEEcCCCCH--HHHHHHHHccCCcEEEccC
Q 028115 79 SK---VGVPFVMGTTGGDR--VRLHETIENSNVYAVISPQ 113 (213)
Q Consensus 79 ~~---~g~~~ViGTTG~~~--~~~~~~~~~~~~~~v~a~N 113 (213)
.. .+..+|.++||... .++.+..+..++.++-+|+
T Consensus 100 ~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv 139 (480)
T 2zyd_A 100 KPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGV 139 (480)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCcc
Confidence 43 35667778888853 3343333333344443444
No 153
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=78.20 E-value=1 Score=37.78 Aligned_cols=99 Identities=13% Similarity=0.108 Sum_probs=57.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+.|++++ ++++.+.... .+ ...++... +..+++ ..+| +||-...|..+.+.++....
T Consensus 23 mG~~la~~l~~~g~~V~-~~~r~~~~~~-~~--~~~g~~~~---~~~~~~-----~~aD-vVi~av~~~~~~~v~~~l~~ 89 (286)
T 3c24_A 23 MGARITRKIHDSAHHLA-AIEIAPEGRD-RL--QGMGIPLT---DGDGWI-----DEAD-VVVLALPDNIIEKVAEDIVP 89 (286)
T ss_dssp HHHHHHHHHHHSSSEEE-EECCSHHHHH-HH--HHTTCCCC---CSSGGG-----GTCS-EEEECSCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHhCCCEEE-EEECCHHHHH-HH--HhcCCCcC---CHHHHh-----cCCC-EEEEcCCchHHHHHHHHHHH
Confidence 79999999888888887 4565432111 11 00122221 233322 2578 88999988888888876554
Q ss_pred ---cCCCEEEEcCCCCHHHHHHHHHccCCcEE-EccCh
Q 028115 81 ---VGVPFVMGTTGGDRVRLHETIENSNVYAV-ISPQM 114 (213)
Q Consensus 81 ---~g~~~ViGTTG~~~~~~~~~~~~~~~~~v-~a~N~ 114 (213)
.+..+|..+||.+.+.++++ ..+..++ ..||+
T Consensus 90 ~l~~~~ivv~~s~~~~~~~l~~~--~~~~~~v~~~P~~ 125 (286)
T 3c24_A 90 RVRPGTIVLILDAAAPYAGVMPE--RADITYFIGHPCH 125 (286)
T ss_dssp GSCTTCEEEESCSHHHHHTCSCC--CTTSEEEEEEECC
T ss_pred hCCCCCEEEECCCCchhHHHHhh--hCCCeEEecCCCC
Confidence 35556668888754443321 1235666 56666
No 154
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=77.98 E-value=9.5 Score=32.87 Aligned_cols=57 Identities=19% Similarity=0.146 Sum_probs=40.8
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCC-EEEEcCCCCHHHHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRLHET 100 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~-~ViGTTG~~~~~~~~~ 100 (213)
.|+...+.++...++|+|++....|+.+...++.+.+.|.+ .++++.||...++...
T Consensus 206 ~d~~~~l~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (419)
T 3h5l_A 206 SDWGPTLAKLRADPPAVIVVTHFYPQDQALFMNQFMTDPTNSLVYLQYGASLAAFRDI 263 (419)
T ss_dssp SCCHHHHHHHHHSCCSEEEECCCCHHHHHHHHHHHTTSCCSCEEEECSGGGSHHHHHH
T ss_pred ccHHHHHHHHHhcCCCEEEEccccCchHHHHHHHHHHcCCCceEEecCCCCcHHHHHh
Confidence 46777777777778995444445677788899999998875 5677888876554443
No 155
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=77.84 E-value=5.4 Score=27.58 Aligned_cols=72 Identities=17% Similarity=0.138 Sum_probs=35.3
Q ss_pred chhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc----CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHH
Q 028115 45 DRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (213)
Q Consensus 45 ~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlG 117 (213)
+..+++..+....||.|++|+..|.. -.+.++...+. .+|+|+-|...+.+...... ..+.--++.-.++..
T Consensus 33 ~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~KP~~~~ 109 (124)
T 1mb3_A 33 EGLSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIR-EGGCEAYISKPISVV 109 (124)
T ss_dssp CHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC------CHHHHH-HHTCSEEECSSCCHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECCCCHHHHHHHH-hCCCCEEEeCCCCHH
Confidence 33444444444578988999998852 34455555542 56766654433333222322 234333444445543
No 156
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=77.67 E-value=15 Score=30.65 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=40.5
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCC-EEEEcCCCCHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRL 97 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~-~ViGTTG~~~~~~ 97 (213)
.|+...+..+...+|| +|+=++.+......++.+.+.|.. .++|+.++...++
T Consensus 183 ~d~~~~l~~i~~~~~d-~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 236 (353)
T 4gnr_A 183 TDFQAALTKMKGKDFD-AIVVPGYYNEAGKIVNQARGMGIDKPIVGGDGFNGEEF 236 (353)
T ss_dssp CCCHHHHHHHHTSCCS-EEECCSCHHHHHHHHHHHHHTTCCSCEEECGGGCSHHH
T ss_pred CCHHHHHHHHHhcCCC-EEEEecCcHHHHHHHHHHHHcCCCCcEEEecccccchh
Confidence 4677777888888899 777788888888899999998853 4677777765443
No 157
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=77.65 E-value=17 Score=33.15 Aligned_cols=123 Identities=10% Similarity=0.111 Sum_probs=64.8
Q ss_pred ChHHHHHHHHhC-CCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAADAA-GLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~~~-~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
||+.+++.+.+. +.+++ ++++.....-+.....+......+..+.++. .++. ..+| +||.-+.+..-....+.|+
T Consensus 34 iG~aia~~L~~~~g~~V~-v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l-~~~l-~~~D-vVIn~tp~~~~~~v~~a~l 109 (467)
T 2axq_A 34 VAQPVIDTLAANDDINVT-VACRTLANAQALAKPSGSKAISLDVTDDSAL-DKVL-ADND-VVISLIPYTFHPNVVKSAI 109 (467)
T ss_dssp THHHHHHHHHTSTTEEEE-EEESSHHHHHHHHGGGTCEEEECCTTCHHHH-HHHH-HTSS-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEE-EEECCHHHHHHHHHhcCCcEEEEecCCHHHH-HHHH-cCCC-EEEECCchhhhHHHHHHHH
Confidence 689999998854 77754 3454332111111111111111112233332 2221 2678 8999887765566788899
Q ss_pred hcCCCEEEEcCCCCHH--HHHHHHHccCCcEEEccChhHHH--HHHHHHHHHH
Q 028115 80 KVGVPFVMGTTGGDRV--RLHETIENSNVYAVISPQMGKQV--VAFLAAMEIM 128 (213)
Q Consensus 80 ~~g~~~ViGTTG~~~~--~~~~~~~~~~~~~v~a~N~SlGv--~ll~~l~~~a 128 (213)
+.|+.++. ++-+... .+.+.++++++.++-...|.-|+ .+..+++.++
T Consensus 110 ~~g~~vvd-~~~~~p~~~~Ll~~Ak~aGv~~i~g~G~~PG~~~~~a~~li~q~ 161 (467)
T 2axq_A 110 RTKTDVVT-SSYISPALRELEPEIVKAGITVMNEIGLDPGIDHLYAVKTIDEV 161 (467)
T ss_dssp HHTCEEEE-CSCCCHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHHHHH
T ss_pred hcCCEEEE-eecCCHHHHHHHHHHHHcCCEEEecCCcCccchHHHHHHHHHHH
Confidence 99988775 3333443 34445555667666666664343 2333355554
No 158
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=77.56 E-value=16 Score=25.76 Aligned_cols=72 Identities=13% Similarity=0.116 Sum_probs=39.6
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh----cCCCEEEEcCCCCHH-HHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRV-RLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~~~ViGTTG~~~~-~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.+++++.+....||.|++|+..|.. -.+.++...+ ..+|+|+-| +.... ....-+...++--++.-.++.
T Consensus 37 ~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s-~~~~~~~~~~~~~~~g~~~~l~kP~~~ 114 (140)
T 3grc_A 37 HSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVS-ANAREGELEFNSQPLAVSTWLEKPIDE 114 (140)
T ss_dssp CSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEEC-TTHHHHHHHHCCTTTCCCEEECSSCCH
T ss_pred CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEe-cCCChHHHHHHhhhcCCCEEEeCCCCH
Confidence 466666666666789988999998853 3444554443 356666654 44333 222112233433345544555
No 159
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=77.53 E-value=12 Score=30.67 Aligned_cols=73 Identities=15% Similarity=0.120 Sum_probs=47.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..++....+..+ ..++..+++.....+ .+..|.|.++.+.+.++.+
T Consensus 30 IG~aia~~l~~~G~~V~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 30 IGAAVAVHLGRLGAKVVVNYANSTK-------------------DAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH-------------------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4888888888888888754322211 112222222222233 3567999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 91 ~~~~g~id~lvnnAg~ 106 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGV 106 (270)
T ss_dssp HHHHSCCCEEECCCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 765 78899988775
No 160
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=77.11 E-value=8.1 Score=26.93 Aligned_cols=56 Identities=14% Similarity=0.243 Sum_probs=33.2
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc----CCCEEEEcCCCC-HHHHHH
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGD-RVRLHE 99 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~~~ViGTTG~~-~~~~~~ 99 (213)
..+.++++..+....||.|++|+..|.. -.+.++...+. .+|+|+ .|+.. .+....
T Consensus 37 ~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~-~s~~~~~~~~~~ 98 (129)
T 1p6q_A 37 AGDGEQGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFII-LTAQGDRALVQK 98 (129)
T ss_dssp CSSHHHHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEE-CCSCCCHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEE-EeCCCCHHHHHH
Confidence 3466666665555678988999998852 34555555443 455555 45554 443333
No 161
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=77.10 E-value=12 Score=26.35 Aligned_cols=72 Identities=17% Similarity=0.104 Sum_probs=37.5
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.++++..+....||.|++|+..|.. -.+.++...+ ..+|+|+-|.-.+.+...... ..+.--++.-.++.
T Consensus 34 ~~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~-~~ga~~~l~KP~~~ 108 (132)
T 3crn_A 34 ATAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYASLENSVFSL-NAGADAYIMKPVNP 108 (132)
T ss_dssp SSHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCCCHHHHHHHH-HTTCSEEEESSCCH
T ss_pred CCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccccHHHHHHHH-hccchhhccCCCCH
Confidence 344555555555678988999998852 3344444443 346666654444444433333 34433333333443
No 162
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=76.86 E-value=22 Score=28.75 Aligned_cols=39 Identities=8% Similarity=-0.088 Sum_probs=29.6
Q ss_pred hhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEc
Q 028115 51 ASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGT 89 (213)
Q Consensus 51 ~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGT 89 (213)
..+....+|.+++--..++...+.++.+.+.|+|+|+--
T Consensus 51 ~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 51 DSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHTTCCEEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHcCCCEEEEeCCCchhhHHHHHHHHHCCCcEEEeC
Confidence 333345789667777777788888999999999998754
No 163
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=76.68 E-value=17 Score=25.69 Aligned_cols=71 Identities=13% Similarity=0.061 Sum_probs=39.8
Q ss_pred CchhHHHhhhh--cCCCCEEEEEcCChHH-HHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHccC-CcEEEccChhH
Q 028115 44 SDRESVLASVF--DKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~--~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~N~Sl 116 (213)
.+.++++..+. ...||.|++|...|.. -.+.++...+ ..+|+|+-|.-.+.+......+ .+ ...+.-| ++.
T Consensus 34 ~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~-~g~~~~l~kp-~~~ 110 (143)
T 3jte_A 34 SSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMK-EGAFEYLRKP-VTA 110 (143)
T ss_dssp SSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHH-TTCSEEEESS-CCH
T ss_pred CCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHH-hCcceeEeCC-CCH
Confidence 35555555544 3578988999998752 2344444433 3577777666555554444333 34 4444444 444
No 164
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=76.50 E-value=18 Score=32.38 Aligned_cols=119 Identities=9% Similarity=0.016 Sum_probs=70.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|++++. ++..+..+- .+.-.|..+..-++.+.+ +|....-..+|.||+-...++.....+..+.+
T Consensus 15 ~G~~va~~L~~~g~~vvv-Id~d~~~v~-~~~~~g~~vi~GDat~~~-~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~ 91 (413)
T 3l9w_A 15 FGQITGRLLLSSGVKMVV-LDHDPDHIE-TLRKFGMKVFYGDATRMD-LLESAGAAKAEVLINAIDDPQTNLQLTEMVKE 91 (413)
T ss_dssp HHHHHHHHHHHTTCCEEE-EECCHHHHH-HHHHTTCCCEESCTTCHH-HHHHTTTTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEE-EECCHHHHH-HHHhCCCeEEEcCCCCHH-HHHhcCCCccCEEEECCCChHHHHHHHHHHHH
Confidence 589999998888998875 564442211 010012222222233433 34433234678667777778888888888888
Q ss_pred cCCC--EEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHHHHH
Q 028115 81 VGVP--FVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAM 125 (213)
Q Consensus 81 ~g~~--~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~ 125 (213)
.+.. +|+=+ .+.+....|.+ .++-.++.|+|--+..+..+++
T Consensus 92 ~~p~~~Iiara--~~~~~~~~L~~-~Gad~Vi~~~~~~a~~la~~~L 135 (413)
T 3l9w_A 92 HFPHLQIIARA--RDVDHYIRLRQ-AGVEKPERETFEGALKTGRLAL 135 (413)
T ss_dssp HCTTCEEEEEE--SSHHHHHHHHH-TTCSSCEETTHHHHHHHHHHHH
T ss_pred hCCCCeEEEEE--CCHHHHHHHHH-CCCCEEECccHHHHHHHHHHHH
Confidence 7754 44423 34555556654 5666788999877766555544
No 165
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=75.94 E-value=20 Score=25.93 Aligned_cols=79 Identities=11% Similarity=0.124 Sum_probs=44.5
Q ss_pred eEeecCCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccCh
Q 028115 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQM 114 (213)
Q Consensus 38 v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~ 114 (213)
+.+....+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+-|.--+.+......+...+--++.-.+
T Consensus 39 ~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~ 118 (153)
T 3hv2_A 39 YTLHFARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKPW 118 (153)
T ss_dssp CEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEECSSC
T ss_pred cEEEEECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEEeCCC
Confidence 444444577777776666789988999998852 2334444333 3567666554444554444443332444444444
Q ss_pred hH
Q 028115 115 GK 116 (213)
Q Consensus 115 Sl 116 (213)
+.
T Consensus 119 ~~ 120 (153)
T 3hv2_A 119 DD 120 (153)
T ss_dssp CH
T ss_pred CH
Confidence 43
No 166
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=75.80 E-value=9.6 Score=31.52 Aligned_cols=87 Identities=16% Similarity=0.070 Sum_probs=50.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcC-ChHHHHHHHHHH-
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYT-VPAAVNGNAELY- 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS-~p~~~~~~~~~~- 78 (213)
||+.+++.+.+.|+++. ++++.+.... .+...++.+. .+.++++. .+| +||-.+ .|..+.+.+...
T Consensus 11 mG~~~a~~l~~~g~~V~-~~~~~~~~~~---~~~~~g~~~~--~~~~~~~~-----~~D-vvi~~vp~~~~~~~v~~~~~ 78 (296)
T 2gf2_A 11 MGNPMAKNLMKHGYPLI-IYDVFPDACK---EFQDAGEQVV--SSPADVAE-----KAD-RIITMLPTSINAIEAYSGAN 78 (296)
T ss_dssp THHHHHHHHHHTTCCEE-EECSSTHHHH---HHHTTTCEEC--SSHHHHHH-----HCS-EEEECCSSHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHCCCEEE-EEeCCHHHHH---HHHHcCCeec--CCHHHHHh-----cCC-EEEEeCCCHHHHHHHHhCch
Confidence 89999999888888876 4565442111 1111234332 35555443 468 666665 677777766531
Q ss_pred -----HhcCCCEEEEcCCCCHHHHHHH
Q 028115 79 -----SKVGVPFVMGTTGGDRVRLHET 100 (213)
Q Consensus 79 -----~~~g~~~ViGTTG~~~~~~~~~ 100 (213)
++.+..+|. ++|.+.+..+++
T Consensus 79 ~~~~~l~~~~~vv~-~s~~~~~~~~~~ 104 (296)
T 2gf2_A 79 GILKKVKKGSLLID-SSTIDPAVSKEL 104 (296)
T ss_dssp SGGGTCCTTCEEEE-CSCCCHHHHHHH
T ss_pred hHHhcCCCCCEEEE-CCCCCHHHHHHH
Confidence 234554555 889887655544
No 167
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=75.76 E-value=7.9 Score=34.08 Aligned_cols=88 Identities=18% Similarity=0.211 Sum_probs=52.5
Q ss_pred ChHHHHHHHHh----CCCeEEEEecCCC-----------cccc----------ccccccCceeEeecCCchhHHHhhhhc
Q 028115 1 MGKAVIKAADA----AGLELVPVSFGTE-----------EESG----------QKVEVCGKEIQVHGLSDRESVLASVFD 55 (213)
Q Consensus 1 MG~~i~~~~~~----~~~elv~~~~~~~-----------~~~g----------~~~~~~~~~v~i~~~~~~~~~l~~~~~ 55 (213)
+|+.+.+++.+ ++++|++..+... ...| ..+.+.+..+.+....|+++.. ..+
T Consensus 13 iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~l~--~~~ 90 (339)
T 2x5j_O 13 IGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERSLQSLP--WRE 90 (339)
T ss_dssp HHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGGCC--HHH
T ss_pred HHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEecCChHHCc--ccc
Confidence 38999998865 6899998765310 0111 1111223345555334444320 111
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHhcCCC-EEEEcCC
Q 028115 56 KYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTG 91 (213)
Q Consensus 56 ~~~d~VvIDFS~p~~~~~~~~~~~~~g~~-~ViGTTG 91 (213)
..+| ++++-|-.....+....+++.|.+ +||-..+
T Consensus 91 ~~vD-vV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 91 LGVD-VVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp HTCS-EEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred cCCC-EEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 2578 899988777788888888899988 4554444
No 168
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=75.73 E-value=25 Score=29.79 Aligned_cols=101 Identities=17% Similarity=0.020 Sum_probs=46.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHH----H
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA----E 76 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~----~ 76 (213)
||+.+++.+.+.|++|++ +++.++.... +...|.... +++.++. ..+|+|++=...+.++.+.+ .
T Consensus 16 MG~~mA~~L~~~G~~V~v-~dr~~~~~~~---l~~~G~~~~--~s~~e~~-----~~~dvvi~~l~~~~~~~~v~~~~~~ 84 (297)
T 4gbj_A 16 LGTPIAEILLEAGYELVV-WNRTASKAEP---LTKLGATVV--ENAIDAI-----TPGGIVFSVLADDAAVEELFSMELV 84 (297)
T ss_dssp THHHHHHHHHHTTCEEEE-C-------CT---TTTTTCEEC--SSGGGGC-----CTTCEEEECCSSHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHHCCCeEEE-EeCCHHHHHH---HHHcCCeEe--CCHHHHH-----hcCCceeeeccchhhHHHHHHHHHH
Confidence 999999999999999874 5654422111 111122221 3444432 24564445555555555432 2
Q ss_pred HHHhcCCCEEEEcCCCCH--HHHHHHHHccCCcEEEcc
Q 028115 77 LYSKVGVPFVMGTTGGDR--VRLHETIENSNVYAVISP 112 (213)
Q Consensus 77 ~~~~~g~~~ViGTTG~~~--~~~~~~~~~~~~~~v~a~ 112 (213)
...+.+.-+|-.+|.... .++.+..++.++..+=+|
T Consensus 85 ~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldap 122 (297)
T 4gbj_A 85 EKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAP 122 (297)
T ss_dssp HHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred hhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCC
Confidence 233344445555555422 133333333344444444
No 169
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=75.68 E-value=9.7 Score=31.06 Aligned_cols=73 Identities=14% Similarity=0.117 Sum_probs=46.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++....+... ..++.++++.....+ .+..|+|.++.+.+.++.+
T Consensus 38 IG~~la~~l~~~G~~v~i~~~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 98 (267)
T 4iiu_A 38 IGRAIARQLAADGFNIGVHYHRDAA-------------------GAQETLNAIVANGGNGRLLSFDVANREQCREVLEHE 98 (267)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCchH-------------------HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4888888888888887654333221 112222222222233 3567999999999999877
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 99 ~~~~g~id~li~nAg~ 114 (267)
T 4iiu_A 99 IAQHGAWYGVVSNAGI 114 (267)
T ss_dssp HHHHCCCSEEEECCCC
T ss_pred HHHhCCccEEEECCCC
Confidence 664 68889888875
No 170
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=75.29 E-value=16 Score=26.05 Aligned_cols=51 Identities=20% Similarity=0.240 Sum_probs=31.6
Q ss_pred CchhHHHhhhhc-CCCCEEEEEcCChH--HHHHHHHHHHh-cCCCEEEEcCCCCH
Q 028115 44 SDRESVLASVFD-KYPNMIVVDYTVPA--AVNGNAELYSK-VGVPFVMGTTGGDR 94 (213)
Q Consensus 44 ~~~~~~l~~~~~-~~~d~VvIDFS~p~--~~~~~~~~~~~-~g~~~ViGTTG~~~ 94 (213)
.+.++++..+.. ..||.|++|...|+ .-.+.++...+ ..+|+|+-|.-.+.
T Consensus 36 ~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~ 90 (140)
T 3h5i_A 36 LTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHTEP 90 (140)
T ss_dssp SSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSSSC
T ss_pred cChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCCCH
Confidence 455666665544 57898899999874 34444444433 46787776554443
No 171
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=75.24 E-value=19 Score=29.09 Aligned_cols=78 Identities=12% Similarity=0.106 Sum_probs=45.8
Q ss_pred eEeecCCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh-cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChh
Q 028115 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK-VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMG 115 (213)
Q Consensus 38 v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~-~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~S 115 (213)
+.+....+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+-|.--+.+...+..+ .+.--++.-.++
T Consensus 62 ~~v~~~~~~~~al~~~~~~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~~~~~~~~a~~-~Ga~~yl~Kp~~ 140 (249)
T 3q9s_A 62 YVVDHADSAMNGLIKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARDTVEEKVRLLG-LGADDYLIKPFH 140 (249)
T ss_dssp CEEEEESSHHHHHHHHHHSCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCCSHHHHHHHHH-HTCSEEEESSCC
T ss_pred CEEEEeCCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHH-CCCcEEEECCCC
Confidence 334334567777766666679988999999973 3344444444 3577777655555544433332 344444455555
Q ss_pred H
Q 028115 116 K 116 (213)
Q Consensus 116 l 116 (213)
.
T Consensus 141 ~ 141 (249)
T 3q9s_A 141 P 141 (249)
T ss_dssp H
T ss_pred H
Confidence 5
No 172
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=75.24 E-value=17 Score=24.90 Aligned_cols=54 Identities=15% Similarity=0.139 Sum_probs=30.7
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh-cCCCEEEEcCCCCHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK-VGVPFVMGTTGGDRVRL 97 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~-~g~~~ViGTTG~~~~~~ 97 (213)
.+..+++..+....||.|++|+..|.. -.+.++...+ ..+|+|+-|...+.+..
T Consensus 34 ~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~ 89 (123)
T 1xhf_A 34 TDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDK 89 (123)
T ss_dssp SSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCCSHHHH
T ss_pred CCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCCChHHH
Confidence 344555555545678988999988842 2334444333 46676665544444443
No 173
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=75.07 E-value=8.7 Score=34.96 Aligned_cols=88 Identities=15% Similarity=0.184 Sum_probs=49.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCcccccccc-ccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh-HHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVE-VCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP-AAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~-~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p-~~~~~~~~~~ 78 (213)
||+.+++.+.+.|+++. ++++.+........ ..+.++.. ..+++++++++ ..+| +||=...+ ..+.+.++..
T Consensus 16 mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~gi~~--~~s~~e~v~~l--~~aD-vVilavp~~~~v~~vl~~l 89 (474)
T 2iz1_A 16 MGKNLALNVESRGYTVA-IYNRTTSKTEEVFKEHQDKNLVF--TKTLEEFVGSL--EKPR-RIMLMVQAGAATDATIKSL 89 (474)
T ss_dssp HHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHTTTSCEEE--CSSHHHHHHTB--CSSC-EEEECCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEE-EEcCCHHHHHHHHHhCcCCCeEE--eCCHHHHHhhc--cCCC-EEEEEccCchHHHHHHHHH
Confidence 89999999888888865 45654422111111 11113333 34666655422 2478 55555554 4677766544
Q ss_pred H---hcCCCEEEEcCCCCH
Q 028115 79 S---KVGVPFVMGTTGGDR 94 (213)
Q Consensus 79 ~---~~g~~~ViGTTG~~~ 94 (213)
. +.|..+|..+||...
T Consensus 90 ~~~l~~g~iiId~s~~~~~ 108 (474)
T 2iz1_A 90 LPLLDIGDILIDGGNTHFP 108 (474)
T ss_dssp GGGCCTTCEEEECSCCCHH
T ss_pred HhhCCCCCEEEECCCCCHH
Confidence 3 346667778888743
No 174
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=74.98 E-value=19 Score=30.10 Aligned_cols=56 Identities=14% Similarity=0.190 Sum_probs=40.5
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCC-EEEEcCCCCHHHHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRLHET 100 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~-~ViGTTG~~~~~~~~~ 100 (213)
.|....+..+....|| +|+=++.+..+...++.+.+.|+. .++|+.+|...++...
T Consensus 191 ~d~~~~~~~l~~~~~d-~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 247 (366)
T 3td9_A 191 QDFSAQLSVAMSFNPD-AIYITGYYPEIALISRQARQLGFTGYILAGDGADAPELIEI 247 (366)
T ss_dssp CCCHHHHHHHHHTCCS-EEEECSCHHHHHHHHHHHHHTTCCSEEEECGGGCSTHHHHH
T ss_pred ccHHHHHHHHHhcCCC-EEEEccchhHHHHHHHHHHHcCCCceEEeeCCcCCHHHHHH
Confidence 4666666777667899 666677888888899999998854 4678888875544333
No 175
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=74.79 E-value=2.2 Score=32.16 Aligned_cols=52 Identities=12% Similarity=0.195 Sum_probs=39.9
Q ss_pred EEEEEcCCh---HHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHccCCcEEEcc
Q 028115 60 MIVVDYTVP---AAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISP 112 (213)
Q Consensus 60 ~VvIDFS~p---~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~ 112 (213)
-||||++.- ..+...++.+.++|+.+ +|.+|.+.++.++.+..++.|++-+.
T Consensus 49 PVVlDl~~l~~~~dl~~L~~~l~~~gl~~-vGV~g~~~~~~~~~a~~~GLp~l~~~ 103 (120)
T 3ghf_A 49 PVVINVSGLESPVNWPELHKIVTSTGLRI-IGVSGCKDASLKVEIDRMGLPLLTEG 103 (120)
T ss_dssp EEEEEEEECCSSCCHHHHHHHHHTTTCEE-EEEESCCCHHHHHHHHHHTCCEECCC
T ss_pred cEEEEccccCChHHHHHHHHHHHHcCCEE-EEEeCCCcHHHHHHHHHCCCCccCCC
Confidence 389998853 45778888888999865 78999887766777777888887554
No 176
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=74.74 E-value=6.9 Score=35.23 Aligned_cols=83 Identities=16% Similarity=0.171 Sum_probs=50.5
Q ss_pred ChHHHHHHHH-h--CCCeEEEEecCC-----------Cccccc----------cccccCceeEeecCCchhHHHhhhhcC
Q 028115 1 MGKAVIKAAD-A--AGLELVPVSFGT-----------EEESGQ----------KVEVCGKEIQVHGLSDRESVLASVFDK 56 (213)
Q Consensus 1 MG~~i~~~~~-~--~~~elv~~~~~~-----------~~~~g~----------~~~~~~~~v~i~~~~~~~~~l~~~~~~ 56 (213)
+||.+.+++. . ++++||+.-+.. ....|+ .+.+.|..+.+....|+++.. ..+.
T Consensus 13 IGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~l~--w~~~ 90 (380)
T 2d2i_A 13 IGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRNPLNLP--WKEW 90 (380)
T ss_dssp HHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSCGGGCC--HHHH
T ss_pred HHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecCChHHCC--cccC
Confidence 4899999987 4 679999875521 011111 111223345555444554421 0112
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHhcCCCEE
Q 028115 57 YPNMIVVDYTVPAAVNGNAELYSKVGVPFV 86 (213)
Q Consensus 57 ~~d~VvIDFS~p~~~~~~~~~~~~~g~~~V 86 (213)
.+| ++++-|-.....+.....++.|.+-|
T Consensus 91 gvD-vV~e~TG~f~s~e~a~~hl~aGakkV 119 (380)
T 2d2i_A 91 DID-LVIESTGVFVTAEGASKHIQAGAKKV 119 (380)
T ss_dssp TCC-EEEECSSSCCBHHHHHHHHHTTCSEE
T ss_pred CCC-EEEECCCccccHHHHHHHHHcCCcEE
Confidence 578 89998877777888888888898844
No 177
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=74.70 E-value=21 Score=25.67 Aligned_cols=77 Identities=12% Similarity=0.057 Sum_probs=45.7
Q ss_pred EeecCCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChh
Q 028115 39 QVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMG 115 (213)
Q Consensus 39 ~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~S 115 (213)
.+....+.+++++.+....||.|++|...|.. -.+.++...+. .+|+|+-|...+.+...... ..++--++.-.++
T Consensus 48 ~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~Kp~~ 126 (150)
T 4e7p_A 48 SVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAV-KAGVDAYVLKERS 126 (150)
T ss_dssp EEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHH-HTTCSEEEETTSC
T ss_pred EEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHH-HCCCcEEEecCCC
Confidence 33334677777777767789988999998753 34455554443 56777766655555444433 3453334444444
Q ss_pred H
Q 028115 116 K 116 (213)
Q Consensus 116 l 116 (213)
.
T Consensus 127 ~ 127 (150)
T 4e7p_A 127 I 127 (150)
T ss_dssp H
T ss_pred H
Confidence 4
No 178
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=74.32 E-value=15 Score=24.95 Aligned_cols=55 Identities=13% Similarity=0.172 Sum_probs=30.8
Q ss_pred chhHHHhhhhcCCCCEEEEEcCChH-HHHHHHHHHHh-cCCCEEEEcCCCCHHHHHH
Q 028115 45 DRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK-VGVPFVMGTTGGDRVRLHE 99 (213)
Q Consensus 45 ~~~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~-~g~~~ViGTTG~~~~~~~~ 99 (213)
+..+++..+....||.|++|+..|. .-.+.++...+ ..+|+|+-|+..+.+....
T Consensus 33 ~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~~~ 89 (121)
T 1zh2_A 33 TLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIA 89 (121)
T ss_dssp SHHHHHHHHHHHCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCSHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEECCCCHHHHHH
Confidence 3344444333457898899999885 23344444433 3577777655555544333
No 179
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=74.32 E-value=19 Score=29.70 Aligned_cols=73 Identities=15% Similarity=0.197 Sum_probs=47.1
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..++....+... ..++..+++...... .+..|.|.++.+...++.+
T Consensus 43 IG~aia~~la~~G~~V~~~~~~~~~-------------------~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 43 IGAAIAKRLALEGAAVALTYVNAAE-------------------RAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHH-------------------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4888898888888887754222211 112222222211223 3567999999999999887
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 104 ~~~~g~iD~lvnnAg~ 119 (271)
T 3v2g_A 104 VEALGGLDILVNSAGI 119 (271)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCcEEEECCCC
Confidence 765 78899988885
No 180
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=74.21 E-value=15 Score=30.66 Aligned_cols=72 Identities=18% Similarity=0.113 Sum_probs=47.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.++|..|+.. ++.. +.+++..+++.....+ .+..|+|.++.+.+.++.+
T Consensus 43 IG~~la~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 43 IGLATATEFARRGARLVLS-DVDQ-------------------PALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCH-------------------HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 4888888888888887643 3322 1122222222222223 3578999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 103 ~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHSSCSEEEECCCC
T ss_pred HHhCCCCCEEEECCCc
Confidence 775 78999988884
No 181
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=74.20 E-value=16 Score=30.42 Aligned_cols=56 Identities=11% Similarity=0.053 Sum_probs=40.4
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCC-EEEEcCCCCHHHHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRLHET 100 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~-~ViGTTG~~~~~~~~~ 100 (213)
.+....+..+....|| +|+=++.+..+...++.+.+.|+. .++|+.+|...++...
T Consensus 181 ~~~~~~~~~l~~~~~d-~i~~~~~~~~a~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~ 237 (358)
T 3hut_A 181 RRFDDVIDEIEDEAPQ-AIYLAMAYEDAAPFLRALRARGSALPVYGSSALYSPKFIDL 237 (358)
T ss_dssp CCCHHHHHHHHHHCCS-EEEEESCHHHHHHHHHHHHHTTCCCCEEECGGGCSHHHHHH
T ss_pred ccHHHHHHHHHhcCCC-EEEEccCchHHHHHHHHHHHcCCCCcEEecCcccCHHHHHH
Confidence 4556666666566899 677788887888999999998754 3678888876555444
No 182
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=74.06 E-value=11 Score=26.73 Aligned_cols=72 Identities=10% Similarity=0.086 Sum_probs=41.1
Q ss_pred CchhHHHhhhhc------CCCCEEEEEcCChHH-HHHHHHHHHh----cCCCEEEEcCCCCHHHHHHHHHccCCcEEEcc
Q 028115 44 SDRESVLASVFD------KYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYAVISP 112 (213)
Q Consensus 44 ~~~~~~l~~~~~------~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~ 112 (213)
.+.++++..+.. ..||.|++|...|.. -.+.++...+ ..+|+|+-|...+.+...... ..++--++.-
T Consensus 40 ~~~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~k 118 (143)
T 2qvg_A 40 KSGNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELRDDSSFTDIEVFVLTAAYTSKDKLAFE-SLNIRGHLIK 118 (143)
T ss_dssp SSHHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHTTSGGGTTCEEEEEESCCCHHHHHHHT-TTTCCEEEES
T ss_pred CCHHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHHcCccccCCcEEEEeCCCCHHHHHHHH-hcCCCeEEEC
Confidence 466666665543 568988999998852 3445555444 356777766655554433332 3443334444
Q ss_pred ChhH
Q 028115 113 QMGK 116 (213)
Q Consensus 113 N~Sl 116 (213)
.++.
T Consensus 119 P~~~ 122 (143)
T 2qvg_A 119 PLDY 122 (143)
T ss_dssp SCCH
T ss_pred CCCH
Confidence 4444
No 183
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=73.99 E-value=23 Score=25.81 Aligned_cols=71 Identities=10% Similarity=0.104 Sum_probs=39.2
Q ss_pred CchhHHHhhhhcC--CCCEEEEEcCChHH-HHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChh
Q 028115 44 SDRESVLASVFDK--YPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMG 115 (213)
Q Consensus 44 ~~~~~~l~~~~~~--~~d~VvIDFS~p~~-~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~S 115 (213)
.+.+++++.+... .+|.|++|...|.. -.+.++...+ ..+|+|+-|.--+.+......+ .++--++.-.++
T Consensus 68 ~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~-~g~~~~l~KP~~ 143 (157)
T 3hzh_A 68 ADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLI-KGAKTFIVKPLD 143 (157)
T ss_dssp SSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHH-TTCSEEEESSCC
T ss_pred CCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHH-cCCCEEEeCCCC
Confidence 4556666655555 67988999988752 2344444433 3577766655555554444433 343333333444
No 184
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=73.86 E-value=21 Score=25.32 Aligned_cols=117 Identities=14% Similarity=0.040 Sum_probs=62.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccc-cccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHH-HHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKV-EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGN-AELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~-~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~-~~~~ 78 (213)
||+.+++.+.+.|.+++. +++.+... +.+ .-.+..+...+..+.+. +.+.....+| ++|-.+........ ...+
T Consensus 15 iG~~~a~~L~~~g~~v~~-~d~~~~~~-~~~~~~~~~~~~~~d~~~~~~-l~~~~~~~~d-~vi~~~~~~~~~~~~~~~~ 90 (140)
T 1lss_A 15 VGYTLAKSLSEKGHDIVL-IDIDKDIC-KKASAEIDALVINGDCTKIKT-LEDAGIEDAD-MYIAVTGKEEVNLMSSLLA 90 (140)
T ss_dssp HHHHHHHHHHHTTCEEEE-EESCHHHH-HHHHHHCSSEEEESCTTSHHH-HHHTTTTTCS-EEEECCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEE-EECCHHHH-HHHHHhcCcEEEEcCCCCHHH-HHHcCcccCC-EEEEeeCCchHHHHHHHHH
Confidence 588899888888888764 45443211 111 00011111111223332 2221123578 66766655544333 3445
Q ss_pred HhcCC-CEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHHHH
Q 028115 79 SKVGV-PFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAA 124 (213)
Q Consensus 79 ~~~g~-~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l 124 (213)
.+.+. .+|+-+++....+ .+ +..++-.+++|.+..+-.+...+
T Consensus 91 ~~~~~~~ii~~~~~~~~~~--~l-~~~g~~~v~~p~~~~~~~~~~~~ 134 (140)
T 1lss_A 91 KSYGINKTIARISEIEYKD--VF-ERLGVDVVVSPELIAANYIEKLI 134 (140)
T ss_dssp HHTTCCCEEEECSSTTHHH--HH-HHTTCSEEECHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEEecCHhHHH--HH-HHcCCCEEECHHHHHHHHHHHHh
Confidence 55553 5777777765433 33 34567789999998887665543
No 185
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=73.84 E-value=32 Score=27.36 Aligned_cols=79 Identities=10% Similarity=0.090 Sum_probs=45.3
Q ss_pred eEeecCCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHccCCcEEEccCh
Q 028115 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQM 114 (213)
Q Consensus 38 v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~ 114 (213)
+.+....+.+++++.+....||.|++|...|.. -.+.++...+. .+|+|+-|.--+.+...... ..+.--++.-.|
T Consensus 48 ~~v~~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~-~~Ga~~yl~Kp~ 126 (250)
T 3r0j_A 48 FEVYTATNGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARDSLQDKIAGL-TLGGDDYVTKPF 126 (250)
T ss_dssp CEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECSTTHHHHHHHH-TSTTCEEEESSC
T ss_pred CEEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHH-HcCCcEEEeCCC
Confidence 333334567777766655679988999999863 34555555554 47777665544444433322 344333444445
Q ss_pred hHH
Q 028115 115 GKQ 117 (213)
Q Consensus 115 SlG 117 (213)
+..
T Consensus 127 ~~~ 129 (250)
T 3r0j_A 127 SLE 129 (250)
T ss_dssp CHH
T ss_pred CHH
Confidence 543
No 186
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=73.71 E-value=10 Score=35.05 Aligned_cols=90 Identities=18% Similarity=0.182 Sum_probs=46.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+.|++|++ .++.+............+..+....+++++++.+ ..+|.|++=-..+..+.+.++....
T Consensus 15 MG~~lA~~L~~~G~~V~v-~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l--~~aDvVil~Vp~~~~v~~vl~~l~~ 91 (484)
T 4gwg_A 15 MGQNLILNMNDHGFVVCA-FNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKL--KKPRRIILLVKAGQAVDDFIEKLVP 91 (484)
T ss_dssp HHHHHHHHHHHTTCCEEE-ECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTB--CSSCEEEECSCSSHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHhcccCCCceeccCCHHHHHhhc--cCCCEEEEecCChHHHHHHHHHHHH
Confidence 899999998888998774 5655432111111000111222234666655432 2477333333333456666554443
Q ss_pred ---cCCCEEEEcCCCC
Q 028115 81 ---VGVPFVMGTTGGD 93 (213)
Q Consensus 81 ---~g~~~ViGTTG~~ 93 (213)
.|.-+|-++|+..
T Consensus 92 ~L~~g~iIId~st~~~ 107 (484)
T 4gwg_A 92 LLDTGDIIIDGGNSEY 107 (484)
T ss_dssp GCCTTCEEEECSCCCH
T ss_pred hcCCCCEEEEcCCCCc
Confidence 4555666777764
No 187
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=73.65 E-value=15 Score=29.38 Aligned_cols=72 Identities=18% Similarity=0.222 Sum_probs=47.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++.. ++... .+++..+++...... .+..|++.++.+...++.+
T Consensus 21 iG~~~a~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 21 IGQAYAEALAREGAAVVVA-DINAE-------------------AAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCHH-------------------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4889999988889887653 33221 112222222111222 3567999999999999887
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 81 ~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 765 78999988886
No 188
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=73.57 E-value=8.6 Score=27.13 Aligned_cols=72 Identities=13% Similarity=0.069 Sum_probs=37.5
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCCh-----H-HHHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChh
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVP-----A-AVNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMG 115 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p-----~-~~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~S 115 (213)
.+.++++..+....+|.|++|+..| . .-.+.++...+ ..+|+|+=|.-.+.+...... ..++--++.-.++
T Consensus 34 ~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~kp~~ 112 (140)
T 2qr3_A 34 SSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGI-KEGASDFVVKPWD 112 (140)
T ss_dssp CCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHH-HTTCCEEEEESCC
T ss_pred CCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHH-HcCchheeeCCCC
Confidence 4555666655556789889999887 3 23344444444 357776655433333333333 3343333333444
Q ss_pred H
Q 028115 116 K 116 (213)
Q Consensus 116 l 116 (213)
.
T Consensus 113 ~ 113 (140)
T 2qr3_A 113 N 113 (140)
T ss_dssp H
T ss_pred H
Confidence 3
No 189
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=73.09 E-value=27 Score=28.28 Aligned_cols=39 Identities=18% Similarity=0.304 Sum_probs=27.6
Q ss_pred hhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcC
Q 028115 52 SVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 52 ~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTT 90 (213)
.+....+|.+|+--..++...+.++.+.+.|+|+|+--.
T Consensus 56 ~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 56 QAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp HHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECC
Confidence 333457895555545566677889999999999997544
No 190
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=72.95 E-value=3.8 Score=29.27 Aligned_cols=51 Identities=12% Similarity=0.186 Sum_probs=32.8
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChH-HHHHHHHHHHh----cCCCEEEEcCCCC
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK----VGVPFVMGTTGGD 93 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~----~g~~~ViGTTG~~ 93 (213)
..+.++++..+....+|.|++|...|. .-.+.++...+ ..+|+|+-|...+
T Consensus 37 ~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 92 (142)
T 3cg4_A 37 ADSGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKNA 92 (142)
T ss_dssp ESSHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTTC
T ss_pred eCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCCC
Confidence 356666666666667898899999885 23456666655 3466666555443
No 191
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=72.73 E-value=14 Score=31.19 Aligned_cols=56 Identities=16% Similarity=0.061 Sum_probs=41.7
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCE---EEEcCCCCHHHHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPF---VMGTTGGDRVRLHET 100 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~---ViGTTG~~~~~~~~~ 100 (213)
.|+...+.++....|| +|+=+..+..+...++.+.+.|+.. ++++.++...++..+
T Consensus 184 ~d~~~~l~~i~~~~~d-~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 242 (379)
T 3n0w_A 184 QDFSSYLLQAKASGAQ-LIVSTSGGAANINIMKQAREFGLPSKTQKVGGMIDILTDVKSA 242 (379)
T ss_dssp CCCHHHHHHHHHHTCS-EEEECCCHHHHHHHHHHHHHTTCSCSSCEEECCBCCHHHHHHH
T ss_pred CCHHHHHHHHHHCCCC-EEEEecccchHHHHHHHHHHcCCCCCCcEEEecccchHHHHhh
Confidence 4666667776667899 6777778777788999999998753 777777776666655
No 192
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=72.59 E-value=12 Score=32.15 Aligned_cols=43 Identities=23% Similarity=0.216 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHhcCCC--EEEEcCC----CCHHHHHHH----HHc-cC-CcEEE
Q 028115 68 PAAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHET----IEN-SN-VYAVI 110 (213)
Q Consensus 68 p~~~~~~~~~~~~~g~~--~ViGTTG----~~~~~~~~~----~~~-~~-~~~v~ 110 (213)
.+++..++++.++.|+. +|.|||| ++.+|..++ .+. .+ +|++.
T Consensus 35 ~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 35 TATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 46778888888888886 5568888 355554333 222 23 77765
No 193
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=72.52 E-value=9.9 Score=31.08 Aligned_cols=73 Identities=16% Similarity=0.137 Sum_probs=46.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++....+..+ ..++..+++.....+ .+..|++.++.+...++.+
T Consensus 38 IG~a~a~~l~~~G~~V~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 98 (272)
T 4e3z_A 38 IGAAVCRLAARQGWRVGVNYAANRE-------------------AADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAV 98 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCChh-------------------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4888898888888887654333221 111111222111222 2556999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 99 ~~~~g~id~li~nAg~ 114 (272)
T 4e3z_A 99 DRQFGRLDGLVNNAGI 114 (272)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhCCCCCEEEECCCC
Confidence 775 78899988774
No 194
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=72.39 E-value=19 Score=29.67 Aligned_cols=58 Identities=9% Similarity=0.076 Sum_probs=41.5
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCC-EEEEcCCCCHHHHHHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRLHETIE 102 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~-~ViGTTG~~~~~~~~~~~ 102 (213)
.+....+..+....|| +|+=++.+..+...++.+.+.|+. .++++.||+..++.++..
T Consensus 177 ~~~~~~~~~l~~~~~d-av~~~~~~~~a~~~~~~~~~~g~~~p~i~~~g~~~~~~~~~~~ 235 (362)
T 3snr_A 177 TSVAGQALKLVAANPD-AILVGASGTAAALPQTTLRERGYNGLIYQTHGAASMDFIRIAG 235 (362)
T ss_dssp SCCHHHHHHHHHHCCS-EEEEECCHHHHHHHHHHHHHTTCCSEEEECGGGCSHHHHHHHG
T ss_pred CCHHHHHHHHHhcCCC-EEEEecCcchHHHHHHHHHHcCCCccEEeccCcCcHHHHHHhH
Confidence 3555556666556899 677777788888999999998863 348889998766555433
No 195
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=72.23 E-value=8.9 Score=26.97 Aligned_cols=50 Identities=24% Similarity=0.294 Sum_probs=29.8
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCC
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGD 93 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~ 93 (213)
.+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+-|..-+
T Consensus 34 ~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (136)
T 1mvo_A 34 SDGEEALKKAETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAKDE 86 (136)
T ss_dssp SSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECTTC
T ss_pred cCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEECCCC
Confidence 344555554444578988999998852 34455555443 567766554333
No 196
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=72.22 E-value=15 Score=32.23 Aligned_cols=79 Identities=23% Similarity=0.239 Sum_probs=48.0
Q ss_pred ChHHHHHHHH-h--CCCeEEEEecCC-----------Cccccc----------cccccCceeEeecCCchhHH-Hhhhhc
Q 028115 1 MGKAVIKAAD-A--AGLELVPVSFGT-----------EEESGQ----------KVEVCGKEIQVHGLSDRESV-LASVFD 55 (213)
Q Consensus 1 MG~~i~~~~~-~--~~~elv~~~~~~-----------~~~~g~----------~~~~~~~~v~i~~~~~~~~~-l~~~~~ 55 (213)
.|+.+.+++. + +++||++..+.. ....|+ .+.+.|..+.+....|+++. ..+
T Consensus 11 iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~l~w~~--- 87 (332)
T 1hdg_O 11 IGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDPSKLPWKD--- 87 (332)
T ss_dssp HHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSGGGSCHHH---
T ss_pred HHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCChHHCcccc---
Confidence 4899999986 6 889999876531 111121 11123334555533344432 111
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHhcCC
Q 028115 56 KYPNMIVVDYTVPAAVNGNAELYSKVGV 83 (213)
Q Consensus 56 ~~~d~VvIDFS~p~~~~~~~~~~~~~g~ 83 (213)
..+| ++++-|-.....+..+.+++.|.
T Consensus 88 ~~vD-vV~~atg~~~s~e~a~~~l~aGa 114 (332)
T 1hdg_O 88 LGVD-FVIESTGVFRNREKAELHLQAGA 114 (332)
T ss_dssp HTCC-EEEECSSSCCBHHHHTHHHHTTC
T ss_pred cCCC-EEEECCccchhHHHHHHHHHcCC
Confidence 2578 88887777777788888888888
No 197
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=72.18 E-value=20 Score=30.34 Aligned_cols=55 Identities=16% Similarity=0.127 Sum_probs=38.3
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCE-EEEcCCCCHHHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPF-VMGTTGGDRVRLHE 99 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~-ViGTTG~~~~~~~~ 99 (213)
.|....+..+....|| +|+=++.+..+...++.+.+.|+.+ ++|+.++...++.+
T Consensus 185 ~d~~~~~~~l~~~~~d-av~~~~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 240 (392)
T 3lkb_A 185 LDNTALLKRFEQAGVE-YVVHQNVAGPVANILKDAKRLGLKMRHLGAHYTGGPDLIA 240 (392)
T ss_dssp CCCHHHHHHHHHTTCC-EEEEESCHHHHHHHHHHHHHTTCCCEEEECGGGCSHHHHH
T ss_pred cCHHHHHHHHHhcCCC-EEEEecCcchHHHHHHHHHHcCCCceEEEecCcccHHHHH
Confidence 3566666666667899 6776677888889999999998654 55666655444433
No 198
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=72.11 E-value=15 Score=29.93 Aligned_cols=73 Identities=16% Similarity=0.106 Sum_probs=46.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCC--CCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY--PNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~--~d~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++....+... ..++.+..+.... ...+..|+|.++.+...++.+
T Consensus 37 IG~~~a~~l~~~G~~v~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 97 (269)
T 3gk3_A 37 LGAAISRRLHDAGMAVAVSHSERND-------------------HVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKV 97 (269)
T ss_dssp HHHHHHHHHHTTTCEEEEEECSCHH-------------------HHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCchH-------------------HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4788888888888887653212211 1111122221112 223568999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 98 ~~~~g~id~li~nAg~ 113 (269)
T 3gk3_A 98 LADFGKVDVLINNAGI 113 (269)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 775 78999988885
No 199
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=72.08 E-value=18 Score=29.89 Aligned_cols=95 Identities=19% Similarity=0.166 Sum_probs=52.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCC-hHHHHHHH----
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTV-PAAVNGNA---- 75 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~-p~~~~~~~---- 75 (213)
||+.+++.+...|+++. ++++.+.... .+ ...++.. ..++++++. .+| +||-.+. |..+...+
T Consensus 16 ~G~~~a~~l~~~g~~V~-~~~~~~~~~~-~~--~~~g~~~--~~~~~~~~~-----~~D-~vi~~v~~~~~~~~~~~~~~ 83 (299)
T 1vpd_A 16 MGKPMSKNLLKAGYSLV-VSDRNPEAIA-DV--IAAGAET--ASTAKAIAE-----QCD-VIITMLPNSPHVKEVALGEN 83 (299)
T ss_dssp THHHHHHHHHHTTCEEE-EECSCHHHHH-HH--HHTTCEE--CSSHHHHHH-----HCS-EEEECCSSHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhCCCEEE-EEeCCHHHHH-HH--HHCCCee--cCCHHHHHh-----CCC-EEEEECCCHHHHHHHHhCcc
Confidence 89999998887788864 4565432111 11 1112333 245655443 478 6666665 66666655
Q ss_pred --HHHHhcCCCEEEEcCCCCH--HHHHHHHHccCCc
Q 028115 76 --ELYSKVGVPFVMGTTGGDR--VRLHETIENSNVY 107 (213)
Q Consensus 76 --~~~~~~g~~~ViGTTG~~~--~~~~~~~~~~~~~ 107 (213)
..+++.+..+|.-+||... +++.+.....++.
T Consensus 84 ~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 119 (299)
T 1vpd_A 84 GIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVE 119 (299)
T ss_dssp CHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred hHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 2234556667777777642 3454443333333
No 200
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=71.84 E-value=12 Score=31.90 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=16.1
Q ss_pred hHHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 68 PAAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 68 p~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
.+++..++++.++.|+. +|.||||
T Consensus 27 ~~~l~~lv~~li~~Gv~gl~~~GttG 52 (297)
T 3flu_A 27 YEQLRDLIDWHIENGTDGIVAVGTTG 52 (297)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTT
T ss_pred HHHHHHHHHHHHHcCCCEEEeCcccc
Confidence 35666777777777776 4457777
No 201
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=71.81 E-value=25 Score=25.25 Aligned_cols=76 Identities=16% Similarity=0.215 Sum_probs=44.1
Q ss_pred cCCCCEEEEEcCChHH-HHHHHHHHHh----cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHHHHHHHHH
Q 028115 55 DKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMA 129 (213)
Q Consensus 55 ~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~~~aa 129 (213)
...||.|++|+..|.. -.+.++...+ ..+|+|+-|...+.+...+..+ .++--++.-.++. .-|.+.++.+.
T Consensus 57 ~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~-~g~~~~l~KP~~~--~~l~~~i~~~~ 133 (152)
T 3heb_A 57 AGRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTTDDQREIQRCYD-LGANVYITKPVNY--ENFANAIRQLG 133 (152)
T ss_dssp TTCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHH-TTCSEEEECCSSH--HHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecCCCHHHHHHHHH-CCCcEEEeCCCCH--HHHHHHHHHHH
Confidence 3468888999998863 3455555554 4678887776666555444433 3433334334444 34445566666
Q ss_pred HhcC
Q 028115 130 EQFP 133 (213)
Q Consensus 130 ~~l~ 133 (213)
+++.
T Consensus 134 ~~~~ 137 (152)
T 3heb_A 134 LFFS 137 (152)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6653
No 202
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=71.79 E-value=7.2 Score=34.52 Aligned_cols=84 Identities=17% Similarity=0.207 Sum_probs=49.0
Q ss_pred ChHHHHHHHH-h---CCCeEEEEecCCC-c--------------cc------cccccccCceeEeecCCchhHHHhhhhc
Q 028115 1 MGKAVIKAAD-A---AGLELVPVSFGTE-E--------------ES------GQKVEVCGKEIQVHGLSDRESVLASVFD 55 (213)
Q Consensus 1 MG~~i~~~~~-~---~~~elv~~~~~~~-~--------------~~------g~~~~~~~~~v~i~~~~~~~~~l~~~~~ 55 (213)
+||.+.+++. + +++++|+.-+... + .. |..+.+.|..+.+....|+++. ...+
T Consensus 12 IGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~~~~dp~~~--~w~~ 89 (335)
T 1obf_O 12 IGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRNPAQL--PWGA 89 (335)
T ss_dssp HHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSCGGGS--CTTT
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCEEEEEEEcCCcccC--Cccc
Confidence 4899999987 4 5899998766211 1 00 2222334445666543444431 1112
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHhcCCC-EEE
Q 028115 56 KYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVM 87 (213)
Q Consensus 56 ~~~d~VvIDFS~p~~~~~~~~~~~~~g~~-~Vi 87 (213)
...| ++++-|-.....+..+.+++.|.. +||
T Consensus 90 ~gvD-iV~estG~f~s~e~a~~h~~aGakkVvi 121 (335)
T 1obf_O 90 LKVD-VVLECTGFFTTKEKAGAHIKGGAKKVII 121 (335)
T ss_dssp TTCS-EEEECSSSCCSHHHHHHHHHHTCSEEEE
T ss_pred cCCC-EEEEccCccccHHHHHHHHHcCCCEEEE
Confidence 3678 889866655666666777777876 444
No 203
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=71.54 E-value=16 Score=25.70 Aligned_cols=71 Identities=11% Similarity=0.110 Sum_probs=39.1
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHccC-CcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~N~Sl 116 (213)
.+.++++..+....||.|++|+..|.. -.+.++...+. .+|+|+-|.--+.+...+..+ .+ ...+.- .++.
T Consensus 36 ~~~~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~-~ga~~~l~K-p~~~ 110 (133)
T 3b2n_A 36 DNGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVV-NDVDAYVLK-ERSI 110 (133)
T ss_dssp SCHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHH-TTCSEEEET-TSCH
T ss_pred CCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHH-cCCcEEEEC-CCCH
Confidence 345555555544578988999998852 34455555443 467766555444444444333 44 344443 3443
No 204
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=71.50 E-value=26 Score=28.46 Aligned_cols=41 Identities=20% Similarity=0.327 Sum_probs=30.1
Q ss_pred HhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcC
Q 028115 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTT 90 (213)
+..+....+|.++|--..++.+.+.++.+.+.|+|+|.--+
T Consensus 54 i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 54 IESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp HHHHHHTCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 33344457896666666677778889999999999998644
No 205
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=71.49 E-value=29 Score=29.01 Aligned_cols=90 Identities=12% Similarity=0.096 Sum_probs=54.5
Q ss_pred ChHHHHHHHHhCCC---eEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGL---ELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~---elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~ 77 (213)
||+.+++.+.+.|+ ++. ++++.+....+... ..++.+. .+..+++ ..+| +||=-..|..+.+.++.
T Consensus 14 mG~aia~~l~~~g~~~~~V~-v~dr~~~~~~~l~~--~~gi~~~--~~~~~~~-----~~aD-vVilav~p~~~~~vl~~ 82 (280)
T 3tri_A 14 MARNIVVGLIANGYDPNRIC-VTNRSLDKLDFFKE--KCGVHTT--QDNRQGA-----LNAD-VVVLAVKPHQIKMVCEE 82 (280)
T ss_dssp HHHHHHHHHHHTTCCGGGEE-EECSSSHHHHHHHH--TTCCEEE--SCHHHHH-----SSCS-EEEECSCGGGHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCeEE-EEeCCHHHHHHHHH--HcCCEEe--CChHHHH-----hcCC-eEEEEeCHHHHHHHHHH
Confidence 89999998887776 554 45655422111101 1134442 3444433 2578 78888888888877766
Q ss_pred HHh----cCCCEEEEcCCCCHHHHHHHH
Q 028115 78 YSK----VGVPFVMGTTGGDRVRLHETI 101 (213)
Q Consensus 78 ~~~----~g~~~ViGTTG~~~~~~~~~~ 101 (213)
... .+..+|.-+.|++.+.+++..
T Consensus 83 l~~~~l~~~~iiiS~~agi~~~~l~~~l 110 (280)
T 3tri_A 83 LKDILSETKILVISLAVGVTTPLIEKWL 110 (280)
T ss_dssp HHHHHHTTTCEEEECCTTCCHHHHHHHH
T ss_pred HHhhccCCCeEEEEecCCCCHHHHHHHc
Confidence 543 333566667889887776654
No 206
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=71.44 E-value=22 Score=24.49 Aligned_cols=72 Identities=10% Similarity=0.131 Sum_probs=40.1
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh----cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.++++..+....||.|++|+..|.. -.+.++...+ ..+|+|+-|...+.+......+ .+.--++.-.++.
T Consensus 36 ~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~-~ga~~~l~KP~~~ 112 (128)
T 1jbe_A 36 EDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQ-AGASGYVVKPFTA 112 (128)
T ss_dssp SSHHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHH-TTCSEEEESSCCH
T ss_pred CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCccHHHHHHHHH-hCcCceeecCCCH
Confidence 455555655555678988999998852 3445555544 2467776655555544433333 3433333334444
No 207
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=71.34 E-value=16 Score=29.80 Aligned_cols=73 Identities=10% Similarity=0.091 Sum_probs=47.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++....+... ..++..+++.....+ .+..|.|.++.+.+.++.+
T Consensus 16 IG~aia~~l~~~G~~vv~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (258)
T 3oid_A 16 VGKAAAIRLAENGYNIVINYARSKK-------------------AALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQI 76 (258)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH-------------------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4899999988999988854343321 112222222222233 2457999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+|+-..|.
T Consensus 77 ~~~~g~id~lv~nAg~ 92 (258)
T 3oid_A 77 DETFGRLDVFVNNAAS 92 (258)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 764 68889987773
No 208
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=71.31 E-value=24 Score=28.53 Aligned_cols=72 Identities=15% Similarity=0.161 Sum_probs=47.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.++|..|+. +++... .+++..+++...... .+..|.|.++.+...++.+
T Consensus 18 IG~aia~~l~~~G~~V~~-~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 18 MGKGMATRFAKEGARVVI-TGRTKE-------------------KLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp HHHHHHHHHHHTTCEEEE-EESCHH-------------------HHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCHH-------------------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 489999998888988775 333321 122222222221223 2567999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 78 ~~~~g~id~lv~nAg~ 93 (257)
T 3imf_A 78 DEKFGRIDILINNAAG 93 (257)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 765 78899988883
No 209
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=71.14 E-value=25 Score=24.98 Aligned_cols=119 Identities=13% Similarity=0.082 Sum_probs=62.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh--HHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP--AAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p--~~~~~~~~~~ 78 (213)
||+.+++.+.+.|.+++. +++.+..... +.-.+..+...+..+.+. +.+.....+| ++|..+.. +........+
T Consensus 17 iG~~~a~~l~~~g~~v~~-~d~~~~~~~~-~~~~~~~~~~~d~~~~~~-l~~~~~~~~d-~vi~~~~~~~~~~~~~~~~~ 92 (144)
T 2hmt_A 17 FGGSIVKELHRMGHEVLA-VDINEEKVNA-YASYATHAVIANATEENE-LLSLGIRNFE-YVIVAIGANIQASTLTTLLL 92 (144)
T ss_dssp HHHHHHHHHHHTTCCCEE-EESCHHHHHT-TTTTCSEEEECCTTCHHH-HHTTTGGGCS-EEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCHHHHHH-HHHhCCEEEEeCCCCHHH-HHhcCCCCCC-EEEECCCCchHHHHHHHHHH
Confidence 588999988877887664 4543321110 100011111111223332 3222123578 77777764 3344566677
Q ss_pred HhcCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHHHHH
Q 028115 79 SKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAM 125 (213)
Q Consensus 79 ~~~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~ 125 (213)
.+.+.+-|+...- +....+.+.+ .+...+++|....+-.+...+.
T Consensus 93 ~~~~~~~ii~~~~-~~~~~~~l~~-~g~~~vi~p~~~~~~~l~~~~~ 137 (144)
T 2hmt_A 93 KELDIPNIWVKAQ-NYYHHKVLEK-IGADRIIHPEKDMGVKIAQSLS 137 (144)
T ss_dssp HHTTCSEEEEECC-SHHHHHHHHH-HTCSEEECHHHHHHHHHHHHHH
T ss_pred HHcCCCeEEEEeC-CHHHHHHHHH-cCCCEEECccHHHHHHHHHHHh
Confidence 7778775554332 2222333433 6777889998888776655543
No 210
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=71.08 E-value=17 Score=33.41 Aligned_cols=88 Identities=19% Similarity=0.191 Sum_probs=50.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCcccccccc-cc-CceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh-HHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVE-VC-GKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP-AAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~-~~-~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p-~~~~~~~~~ 77 (213)
||+.++..+.+.|++|+ ++++.+....+... .. +.++.. ..+++++++++ ..+| +||=..-+ ..+.+.++.
T Consensus 21 MG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~~~~~gi~~--~~s~~e~v~~l--~~aD-vVil~Vp~~~~v~~vl~~ 94 (497)
T 2p4q_A 21 MGQNLILNAADHGFTVC-AYNRTQSKVDHFLANEAKGKSIIG--ATSIEDFISKL--KRPR-KVMLLVKAGAPVDALINQ 94 (497)
T ss_dssp HHHHHHHHHHHTTCCEE-EECSSSHHHHHHHHTTTTTSSEEC--CSSHHHHHHTS--CSSC-EEEECCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHcccccCCCeEE--eCCHHHHHhcC--CCCC-EEEEEcCChHHHHHHHHH
Confidence 89999999988899876 45655432211111 10 023333 35676655432 2478 45544444 577777765
Q ss_pred HHh---cCCCEEEEcCCCCH
Q 028115 78 YSK---VGVPFVMGTTGGDR 94 (213)
Q Consensus 78 ~~~---~g~~~ViGTTG~~~ 94 (213)
... .|..+|.++||...
T Consensus 95 l~~~l~~g~iIId~s~~~~~ 114 (497)
T 2p4q_A 95 IVPLLEKGDIIIDGGNSHFP 114 (497)
T ss_dssp HGGGCCTTCEEEECSCCCHH
T ss_pred HHHhCCCCCEEEECCCCChh
Confidence 544 35557778888754
No 211
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=71.05 E-value=34 Score=26.99 Aligned_cols=72 Identities=15% Similarity=0.211 Sum_probs=46.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCC-CccccccccccCceeEeecCCchhHHHhhhhcCCC--CEEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGT-EEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYP--NMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~-~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~--d~VvIDFS~p~~~~~~~~~ 77 (213)
+|+.+++.+.+.|.+++.. ++. + +.+++..+++..... ..+..|++.++.+.+.++.
T Consensus 19 iG~~~a~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 78 (258)
T 3afn_B 19 IGLATARLFARAGAKVGLH-GRKAP-------------------ANIDETIASMRADGGDAAFFAADLATSEACQQLVDE 78 (258)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSCC-------------------TTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-CCCch-------------------hhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 4889999988889987753 332 2 112222222211111 2356799999999998887
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.+||-..|.
T Consensus 79 ~~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 79 FVAKFGGIDVLINNAGG 95 (258)
T ss_dssp HHHHHSSCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 7654 78999988875
No 212
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=70.98 E-value=9.9 Score=30.90 Aligned_cols=90 Identities=18% Similarity=0.159 Sum_probs=54.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+.|.++ .++++.+........ ..++.+ ..+.++++. .+| +||-.+.|....+.++.+ +
T Consensus 14 mG~~~a~~l~~~g~~v-~~~~~~~~~~~~~~~--~~g~~~--~~~~~~~~~-----~~D-~Vi~~v~~~~~~~v~~~l-~ 81 (259)
T 2ahr_A 14 MASAIIKGLKQTPHEL-IISGSSLERSKEIAE--QLALPY--AMSHQDLID-----QVD-LVILGIKPQLFETVLKPL-H 81 (259)
T ss_dssp HHHHHHHHHTTSSCEE-EEECSSHHHHHHHHH--HHTCCB--CSSHHHHHH-----TCS-EEEECSCGGGHHHHHTTS-C
T ss_pred HHHHHHHHHHhCCCeE-EEECCCHHHHHHHHH--HcCCEe--eCCHHHHHh-----cCC-EEEEEeCcHhHHHHHHHh-c
Confidence 7899998887777654 456654422111000 012332 245555442 578 788888888887777654 3
Q ss_pred cCCCEEEEcCCCCHHHHHHHHH
Q 028115 81 VGVPFVMGTTGGDRVRLHETIE 102 (213)
Q Consensus 81 ~g~~~ViGTTG~~~~~~~~~~~ 102 (213)
.+..+|.-++|.+.++++++..
T Consensus 82 ~~~~vv~~~~~~~~~~l~~~~~ 103 (259)
T 2ahr_A 82 FKQPIISMAAGISLQRLATFVG 103 (259)
T ss_dssp CCSCEEECCTTCCHHHHHHHHC
T ss_pred cCCEEEEeCCCCCHHHHHHhcC
Confidence 5666666667898877766654
No 213
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=70.93 E-value=25 Score=28.40 Aligned_cols=72 Identities=17% Similarity=0.118 Sum_probs=47.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcC---CCCEEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK---YPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~---~~d~VvIDFS~p~~~~~~~~~ 77 (213)
+|+.+++.+.+.|..++.. ++... .+++..+++... ....+..|+|.++.+...++.
T Consensus 35 IG~~~a~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 35 IGSTTARRALLEGADVVIS-DYHER-------------------RLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEEe-cCCHH-------------------HHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH
Confidence 4888898888888887643 33221 122222222111 122356799999999999998
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.+||-..|.
T Consensus 95 ~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCCcEEEECCCc
Confidence 8775 78999998885
No 214
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=70.86 E-value=15 Score=29.58 Aligned_cols=73 Identities=14% Similarity=0.187 Sum_probs=47.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++....+... ..++..+++.....+ .+..|.|.++.+...++.+
T Consensus 16 IG~~ia~~l~~~G~~V~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 76 (246)
T 3osu_A 16 IGRSIALQLAEEGYNVAVNYAGSKE-------------------KAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEV 76 (246)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHH-------------------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4889999988889988753222211 112222222222233 2567999999999999887
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+|+-..|.
T Consensus 77 ~~~~g~id~lv~nAg~ 92 (246)
T 3osu_A 77 VSQFGSLDVLVNNAGI 92 (246)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 765 78899988885
No 215
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=70.52 E-value=15 Score=29.03 Aligned_cols=73 Identities=15% Similarity=0.144 Sum_probs=46.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--E-EEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--M-IVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~-VvIDFS~p~~~~~~~~~ 77 (213)
+|+.+++.+.++|.+++....+... ..++..+++...... . +..|.+.++.+.+.++.
T Consensus 13 iG~~~a~~l~~~G~~v~~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (245)
T 2ph3_A 13 IGRAIALRLAEDGFALAIHYGQNRE-------------------KAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQ 73 (245)
T ss_dssp HHHHHHHHHHTTTCEEEEEESSCHH-------------------HHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH-------------------HHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Confidence 4899999988889988765343321 111111111111222 2 34599999999998887
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.+|+-..|.
T Consensus 74 ~~~~~~~~d~li~~Ag~ 90 (245)
T 2ph3_A 74 AAEVLGGLDTLVNNAGI 90 (245)
T ss_dssp HHHHHTCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 7653 78899988874
No 216
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=70.48 E-value=11 Score=33.44 Aligned_cols=80 Identities=18% Similarity=0.182 Sum_probs=50.1
Q ss_pred hHHHHH-HHHhCC---CeEEEEecCCCcccccccc-ccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHH
Q 028115 2 GKAVIK-AADAAG---LELVPVSFGTEEESGQKVE-VCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 2 G~~i~~-~~~~~~---~elv~~~~~~~~~~g~~~~-~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (213)
|+.+.+ .+.+++ .++...... ..|+.+. +.+..+.+....+.+. + ..+| ++++.+-.....+...
T Consensus 14 G~~llr~ll~~~~~~~v~i~~~~~~---s~G~~v~~~~g~~i~~~~~~~~~~-~-----~~~D-vVf~a~g~~~s~~~a~ 83 (367)
T 1t4b_A 14 GSVLMQRMVEERDFDAIRPVFFSTS---QLGQAAPSFGGTTGTLQDAFDLEA-L-----KALD-IIVTCQGGDYTNEIYP 83 (367)
T ss_dssp HHHHHHHHHHTTGGGGSEEEEEESS---STTSBCCGGGTCCCBCEETTCHHH-H-----HTCS-EEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCeEEEEEEEeC---CCCCCccccCCCceEEEecCChHH-h-----cCCC-EEEECCCchhHHHHHH
Confidence 889999 455554 445433222 2455442 3333444443333333 2 2578 8898888889999999
Q ss_pred HHHhcCCC-EEEEcCC
Q 028115 77 LYSKVGVP-FVMGTTG 91 (213)
Q Consensus 77 ~~~~~g~~-~ViGTTG 91 (213)
.+.+.|++ +||.-++
T Consensus 84 ~~~~~G~k~vVID~ss 99 (367)
T 1t4b_A 84 KLRESGWQGYWIDAAS 99 (367)
T ss_dssp HHHHTTCCCEEEECSS
T ss_pred HHHHCCCCEEEEcCCh
Confidence 99999984 7777665
No 217
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=70.36 E-value=13 Score=33.81 Aligned_cols=108 Identities=17% Similarity=0.171 Sum_probs=58.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCcccccccc-c-cCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh-HHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVE-V-CGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP-AAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~-~-~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p-~~~~~~~~~ 77 (213)
||+.++..+.+.|+++. ++++.+........ . .+.++.. ..+++++++.+ ..+| +||=..-+ ..+.+.++.
T Consensus 13 mG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~~~g~gi~~--~~~~~e~v~~l--~~aD-vVilaVp~~~~v~~vl~~ 86 (482)
T 2pgd_A 13 MGQNLILNMNDHGFVVC-AFNRTVSKVDDFLANEAKGTKVLG--AHSLEEMVSKL--KKPR-RIILLVKAGQAVDNFIEK 86 (482)
T ss_dssp HHHHHHHHHHHTTCCEE-EECSSTHHHHHHHHTTTTTSSCEE--CSSHHHHHHHB--CSSC-EEEECSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHhccccCCCeEE--eCCHHHHHhhc--cCCC-EEEEeCCChHHHHHHHHH
Confidence 89999999888888865 45654422111101 0 0123333 34666655432 2588 55555444 366766654
Q ss_pred HH---hcCCCEEEEcCCCCHH--HHHHHHHccCCcEEEccCh
Q 028115 78 YS---KVGVPFVMGTTGGDRV--RLHETIENSNVYAVISPQM 114 (213)
Q Consensus 78 ~~---~~g~~~ViGTTG~~~~--~~~~~~~~~~~~~v~a~N~ 114 (213)
.. +.+..+|.++||.... ++.+.....++.++-+|++
T Consensus 87 l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~ 128 (482)
T 2pgd_A 87 LVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVS 128 (482)
T ss_dssp HHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCC
Confidence 43 3466677788887542 3433333334444545554
No 218
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=70.33 E-value=16 Score=28.43 Aligned_cols=78 Identities=21% Similarity=0.202 Sum_probs=41.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh------------
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP------------ 68 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p------------ 68 (213)
.|+.+++.+.+.|.++++. ++.+..... +. .+..+...+..|.++. .+.. ..+| +||....+
T Consensus 16 iG~~l~~~L~~~g~~V~~~-~r~~~~~~~-~~-~~~~~~~~Dl~d~~~~-~~~~-~~~d-~vi~~a~~~~~~~~~~~~n~ 89 (227)
T 3dhn_A 16 VGSALLNEALNRGFEVTAV-VRHPEKIKI-EN-EHLKVKKADVSSLDEV-CEVC-KGAD-AVISAFNPGWNNPDIYDETI 89 (227)
T ss_dssp HHHHHHHHHHTTTCEEEEE-CSCGGGCCC-CC-TTEEEECCCTTCHHHH-HHHH-TTCS-EEEECCCC------CCSHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-EcCcccchh-cc-CceEEEEecCCCHHHH-HHHh-cCCC-EEEEeCcCCCCChhHHHHHH
Confidence 3899999999889988864 433321110 00 1111111111233332 2222 2578 77777544
Q ss_pred HHHHHHHHHHHhcCCC
Q 028115 69 AAVNGNAELYSKVGVP 84 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~~ 84 (213)
..+...++.|.+.+++
T Consensus 90 ~~~~~l~~~~~~~~~~ 105 (227)
T 3dhn_A 90 KVYLTIIDGVKKAGVN 105 (227)
T ss_dssp HHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHhCCC
Confidence 3456677777777764
No 219
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=70.07 E-value=34 Score=26.08 Aligned_cols=51 Identities=16% Similarity=0.176 Sum_probs=30.4
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc-CCCEEEEcCCCCHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV-GVPFVMGTTGGDRV 95 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~-g~~~ViGTTG~~~~ 95 (213)
.+.++++..+....||.|++|+..|.. -.+.++...+. ..|+|+ .|++...
T Consensus 45 ~~~~~al~~~~~~~~dlvi~D~~~p~~~g~~~~~~l~~~~~~pii~-lt~~~~~ 97 (205)
T 1s8n_A 45 GDGQEAVELAELHKPDLVIMDVKMPRRDGIDAASEIASKRIAPIVV-LTAFSQR 97 (205)
T ss_dssp SSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCSCEEE-EEEGGGH
T ss_pred CCHHHHHHHHhhcCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEE-EecCCCH
Confidence 455566655555579988999998852 33445544443 345544 4565543
No 220
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=69.95 E-value=16 Score=26.11 Aligned_cols=49 Identities=14% Similarity=0.190 Sum_probs=29.5
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChH-HHHHHHHHHHh--cCCCEEEEcCCCC
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK--VGVPFVMGTTGGD 93 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~--~g~~~ViGTTG~~ 93 (213)
.+.++++..+....||.|++|...|. .-.+.++...+ ..+|+|+- |+..
T Consensus 36 ~~~~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~l-s~~~ 87 (141)
T 3cu5_A 36 DDGINAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFM-SGYS 87 (141)
T ss_dssp SSHHHHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEE-CCST
T ss_pred ccHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEE-eCCC
Confidence 45555565555557898899999885 23344444443 34666654 4544
No 221
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=69.78 E-value=11 Score=32.57 Aligned_cols=15 Identities=20% Similarity=0.175 Sum_probs=9.2
Q ss_pred cCCCEEEEcCCCCHH
Q 028115 81 VGVPFVMGTTGGDRV 95 (213)
Q Consensus 81 ~g~~~ViGTTG~~~~ 95 (213)
.++|+|+||.+.+.+
T Consensus 76 grvpviaGvg~~~t~ 90 (309)
T 3fkr_A 76 GRVPVIVTTSHYSTQ 90 (309)
T ss_dssp TSSCEEEECCCSSHH
T ss_pred CCCcEEEecCCchHH
Confidence 456777776666543
No 222
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=69.78 E-value=9.8 Score=29.56 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=39.9
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChH-HHHHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlG 117 (213)
.+.++++..+....||.|++|...|. .-.+.++...+. .+|+|+= |+....+...-+-..+.--++.-.++..
T Consensus 33 ~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~l-s~~~~~~~~~~~~~~ga~~~l~Kp~~~~ 108 (225)
T 1kgs_A 33 YDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLML-TALSDVEYRVKGLNMGADDYLPKPFDLR 108 (225)
T ss_dssp SSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEE-ESSCHHHHHHHTCCCCCSEEEESSCCHH
T ss_pred CCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEE-eCCCCHHHHHHHHhCCccEEEeCCCCHH
Confidence 34455555555567998899999985 234555555543 5676664 5555443222222344333444445543
No 223
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=69.69 E-value=20 Score=30.41 Aligned_cols=51 Identities=12% Similarity=0.107 Sum_probs=34.2
Q ss_pred EEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCH--HHHHHHHHccCCcEEEccC
Q 028115 61 IVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDR--VRLHETIENSNVYAVISPQ 113 (213)
Q Consensus 61 VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~--~~~~~~~~~~~~~~v~a~N 113 (213)
+.||=+.|+.+...++.| .|.++|--.+|..+ +++-.++.+.+.|+++-++
T Consensus 81 isIDT~~~~v~~aal~a~--~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 81 CCLDSTNPDAIEAGLKVH--RGHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp EEEECSCHHHHHHHHHHC--CSCCEEEEECSCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred EEEeCCCHHHHHHHHHhC--CCCCEEEECCCCccccHHHHHHHHHcCCCEEEEec
Confidence 678888887776666655 37888877777754 4555556666777766544
No 224
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=69.68 E-value=4.7 Score=34.98 Aligned_cols=15 Identities=7% Similarity=0.107 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHhcCC
Q 028115 69 AAVNGNAELYSKVGV 83 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~ 83 (213)
+++..++++.++.|+
T Consensus 33 ~~l~~lv~~li~~Gv 47 (316)
T 3e96_A 33 HHYKETVDRIVDNGI 47 (316)
T ss_dssp HHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 334444444444444
No 225
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=69.65 E-value=5.9 Score=27.54 Aligned_cols=49 Identities=18% Similarity=0.367 Sum_probs=29.8
Q ss_pred chhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh----cCCCEEEEcCCCCH
Q 028115 45 DRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDR 94 (213)
Q Consensus 45 ~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~~~ViGTTG~~~ 94 (213)
+.+++++.+....||.|++|...|.. -.+.++...+ ..+|+|+-| +...
T Consensus 34 ~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s-~~~~ 87 (127)
T 2jba_A 34 DYDSAVNQLNEPWPDLILLAWMLPGGSGIQFIKHLRRESMTRDIPVVMLT-ARGE 87 (127)
T ss_dssp SHHHHHTTCSSSCCSEEEEESEETTEEHHHHHHHHHTSTTTTTSCEEEEE-ETTH
T ss_pred CHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhCcccCCCCEEEEe-CCCC
Confidence 44555555545568988999998852 3455555554 356766654 4444
No 226
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=69.62 E-value=14 Score=31.39 Aligned_cols=24 Identities=25% Similarity=0.261 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 68 PAAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 68 p~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
.+++..++++.++.|+. +|.||||
T Consensus 21 ~~~l~~lv~~li~~Gv~gl~~~GttG 46 (291)
T 3tak_A 21 WKSLEKLVEWHIEQGTNSIVAVGTTG 46 (291)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESSTTT
T ss_pred HHHHHHHHHHHHHCCCCEEEECcccc
Confidence 35677777777777776 4557777
No 227
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=69.31 E-value=15 Score=30.27 Aligned_cols=72 Identities=13% Similarity=0.141 Sum_probs=47.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..|+.. ++.. +.+++..+++.....+ .+..|+|.++.+...++.+
T Consensus 36 IG~aia~~la~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 36 IGLAVARTLAARGIAVYGC-ARDA-------------------KNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4888998888888887643 3322 1122222232222233 3567999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 96 ~~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 96 VERFGPIGILVNSAGR 111 (279)
T ss_dssp HHHHCSCCEEEECCCC
T ss_pred HHHcCCCcEEEECCCC
Confidence 765 78899988885
No 228
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=69.16 E-value=20 Score=27.14 Aligned_cols=57 Identities=7% Similarity=-0.067 Sum_probs=33.2
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh--cCCCEEEEcCCCCHHHHHH
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHE 99 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~ 99 (213)
..+.+++++.+....||.|++|+..|.. -.+.++...+ ..+|+|+-|.--+.+...+
T Consensus 37 ~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~ 96 (184)
T 3rqi_A 37 AHNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYASIATAVQ 96 (184)
T ss_dssp ECSHHHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSCCHHHHHH
T ss_pred eCCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHH
Confidence 3566667766666679988999998852 2333433333 3466655444334444333
No 229
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=68.97 E-value=16 Score=29.82 Aligned_cols=72 Identities=18% Similarity=0.155 Sum_probs=46.3
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCC--CEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYP--NMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~--d~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..++....+... ..++..+++..... ..+..|.|.++.+...++.+
T Consensus 20 IG~aia~~la~~G~~V~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 20 IGRACAIRFAQEGANVVLTYNGAAE-------------------GAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSCH-------------------HHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH-------------------HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4889999988889988754333221 11222222221122 23567999999999999888
Q ss_pred Hhc--CCCEEEEcCC
Q 028115 79 SKV--GVPFVMGTTG 91 (213)
Q Consensus 79 ~~~--g~~~ViGTTG 91 (213)
.+. ++.+++-..|
T Consensus 81 ~~~~g~id~lv~nAg 95 (259)
T 3edm_A 81 ADKFGEIHGLVHVAG 95 (259)
T ss_dssp HHHHCSEEEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 775 6778886665
No 230
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=68.42 E-value=15 Score=32.26 Aligned_cols=86 Identities=12% Similarity=0.169 Sum_probs=53.4
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCC-Ccccccccc-----ccCc-eeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGT-EEESGQKVE-----VCGK-EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVN 72 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~-~~~~g~~~~-----~~~~-~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~ 72 (213)
+|+.+.+.+. .++++++....+. .+..|+.+. +.+. .+.+....+.++ +. ..+| |++.-+-.....
T Consensus 16 vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~----~~-~~~D-vvf~a~p~~~s~ 89 (337)
T 3dr3_A 16 AGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISE----FS-PGVD-VVFLATAHEVSH 89 (337)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGG----TC-TTCS-EEEECSCHHHHH
T ss_pred HHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHH----Hh-cCCC-EEEECCChHHHH
Confidence 4899999887 5899999876643 235566552 2222 233321002222 11 2578 667444444568
Q ss_pred HHHHHHHhcCCCEEEEcCCC
Q 028115 73 GNAELYSKVGVPFVMGTTGG 92 (213)
Q Consensus 73 ~~~~~~~~~g~~~ViGTTG~ 92 (213)
+.+..+.+.|+.+|--++=|
T Consensus 90 ~~~~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 90 DLAPQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp HHHHHHHHTTCEEEECSSTT
T ss_pred HHHHHHHHCCCEEEEcCCcc
Confidence 89999999999988887776
No 231
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=68.40 E-value=21 Score=31.00 Aligned_cols=81 Identities=16% Similarity=0.135 Sum_probs=51.8
Q ss_pred hHHHHHHHH-h--CCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 2 GKAVIKAAD-A--AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 2 G~~i~~~~~-~--~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
|+.+.+.+. . +++++++..+.. ..|+.+.+.+..+.+. +++. +.+ ...| +++.-+-.....+.++.+
T Consensus 16 G~~llr~L~~~~~p~~elv~i~s~~--~~G~~~~~~~~~i~~~---~~~~--~~~--~~vD-vVf~a~g~~~s~~~a~~~ 85 (336)
T 2r00_A 16 GETMLEVLQEREFPVDELFLLASER--SEGKTYRFNGKTVRVQ---NVEE--FDW--SQVH-IALFSAGGELSAKWAPIA 85 (336)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEECTT--TTTCEEEETTEEEEEE---EGGG--CCG--GGCS-EEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCEEEEEEECCC--CCCCceeecCceeEEe---cCCh--HHh--cCCC-EEEECCCchHHHHHHHHH
Confidence 889999887 4 678999876532 3344443333334442 2221 111 2578 788888778889999999
Q ss_pred HhcCCCEEEEcCCC
Q 028115 79 SKVGVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~g~~~ViGTTG~ 92 (213)
.+.|+.+|.-+.-|
T Consensus 86 ~~~G~~vId~s~~~ 99 (336)
T 2r00_A 86 AEAGVVVIDNTSHF 99 (336)
T ss_dssp HHTTCEEEECSSTT
T ss_pred HHcCCEEEEcCCcc
Confidence 99999766655433
No 232
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=68.04 E-value=14 Score=32.87 Aligned_cols=43 Identities=16% Similarity=0.091 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHHhcCCC--EEEEcCC----CCHHHHHHH----HHc-cC-CcEEE
Q 028115 68 PAAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHET----IEN-SN-VYAVI 110 (213)
Q Consensus 68 p~~~~~~~~~~~~~g~~--~ViGTTG----~~~~~~~~~----~~~-~~-~~~v~ 110 (213)
.+++..++++.++.|+. +|.|||| ++.+|..++ .+. .+ +|++.
T Consensus 79 ~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 79 LEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 47788899999999987 5569999 455554443 222 33 78775
No 233
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=68.03 E-value=12 Score=32.35 Aligned_cols=16 Identities=13% Similarity=0.204 Sum_probs=10.4
Q ss_pred hcCCCEEEEcCCCCHH
Q 028115 80 KVGVPFVMGTTGGDRV 95 (213)
Q Consensus 80 ~~g~~~ViGTTG~~~~ 95 (213)
..++|+|.||.+.+.+
T Consensus 78 ~grvpviaGvg~~~t~ 93 (318)
T 3qfe_A 78 GPDFPIMAGVGAHSTR 93 (318)
T ss_dssp CTTSCEEEECCCSSHH
T ss_pred CCCCcEEEeCCCCCHH
Confidence 3457777777776643
No 234
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=67.80 E-value=18 Score=25.57 Aligned_cols=51 Identities=22% Similarity=0.176 Sum_probs=31.1
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc-CCCEEEEcCCCCH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV-GVPFVMGTTGGDR 94 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~-g~~~ViGTTG~~~ 94 (213)
.+.++++..+....||.|++|...|.. -.+.++...+. ..+.|+-.|+...
T Consensus 42 ~~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 94 (143)
T 2qv0_A 42 DDGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKE 94 (143)
T ss_dssp SCHHHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEEESCCT
T ss_pred CCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEEEEeCCHH
Confidence 455666655555679988999998852 33445544443 3444566667654
No 235
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=67.78 E-value=6.3 Score=34.15 Aligned_cols=31 Identities=19% Similarity=0.044 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHhcCCC--EEEEcCC----CCHHHHHH
Q 028115 69 AAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHE 99 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~~--~ViGTTG----~~~~~~~~ 99 (213)
+++..++++.++.|+. +|.|||| ++.+|..+
T Consensus 28 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~ 64 (311)
T 3h5d_A 28 DAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELE 64 (311)
T ss_dssp THHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHH
Confidence 5677777777777775 5667777 45554433
No 236
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=67.77 E-value=26 Score=23.82 Aligned_cols=71 Identities=13% Similarity=0.193 Sum_probs=38.2
Q ss_pred chhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 45 DRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 45 ~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
+.++++..+....||.|++|+..|.. -.+.++...+ ..+|+|+=|.--+.+......+ .+.--++.-.++.
T Consensus 35 ~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l~KP~~~ 108 (120)
T 1tmy_A 35 NGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIK-AGAKDFIVKPFQP 108 (120)
T ss_dssp SHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHH-TTCCEEEESSCCH
T ss_pred CHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHH-hCcceeEeCCCCH
Confidence 44444544444578988999999863 3445555443 3577766555445544333333 4433333333443
No 237
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=67.76 E-value=18 Score=30.99 Aligned_cols=23 Identities=26% Similarity=0.485 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
+++..++++.++.|+. +|.||||
T Consensus 32 ~~l~~lv~~li~~Gv~Gl~v~GtTG 56 (303)
T 2wkj_A 32 ASLRRLVQFNIQQGIDGLYVGGSTG 56 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTT
T ss_pred HHHHHHHHHHHHcCCCEEEECeecc
Confidence 5566666666666664 3456666
No 238
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=67.73 E-value=16 Score=31.36 Aligned_cols=23 Identities=30% Similarity=0.303 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
+++..++++.++.|+. +|.||||
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTG 57 (301)
T 1xky_A 33 AKTTKLVNYLIDNGTTAIVVGGTTG 57 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTT
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc
Confidence 3444555555555543 2345555
No 239
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=67.55 E-value=40 Score=26.10 Aligned_cols=80 Identities=11% Similarity=0.069 Sum_probs=45.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCc-hhHHHhhhhcCCCCEEEEEcCCh----------H
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSD-RESVLASVFDKYPNMIVVDYTVP----------A 69 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~-~~~~l~~~~~~~~d~VvIDFS~p----------~ 69 (213)
+|+.+++.+.+.|.++++. ++.+..... ..+..+...+..| .+.. .+.. ..+| +||....+ .
T Consensus 12 iG~~l~~~L~~~g~~V~~~-~R~~~~~~~---~~~~~~~~~D~~d~~~~~-~~~~-~~~d-~vi~~ag~~~~~~~~~n~~ 84 (219)
T 3dqp_A 12 VGKSLLKSLSTTDYQIYAG-ARKVEQVPQ---YNNVKAVHFDVDWTPEEM-AKQL-HGMD-AIINVSGSGGKSLLKVDLY 84 (219)
T ss_dssp HHHHHHHHHTTSSCEEEEE-ESSGGGSCC---CTTEEEEECCTTSCHHHH-HTTT-TTCS-EEEECCCCTTSSCCCCCCH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCccchhh---cCCceEEEecccCCHHHH-HHHH-cCCC-EEEECCcCCCCCcEeEeHH
Confidence 4899999998889998865 433321110 0111111111233 4332 3322 3678 78887643 3
Q ss_pred HHHHHHHHHHhcCCCEEE
Q 028115 70 AVNGNAELYSKVGVPFVM 87 (213)
Q Consensus 70 ~~~~~~~~~~~~g~~~Vi 87 (213)
.+...++.|.+.+++-+|
T Consensus 85 ~~~~l~~a~~~~~~~~iv 102 (219)
T 3dqp_A 85 GAVKLMQAAEKAEVKRFI 102 (219)
T ss_dssp HHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHhCCCEEE
Confidence 477888888888876444
No 240
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=67.50 E-value=19 Score=30.61 Aligned_cols=23 Identities=30% Similarity=0.517 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
+++..++++.++.|+. +|.||||
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttG 45 (289)
T 2yxg_A 21 DGLEENINFLIENGVSGIVAVGTTG 45 (289)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTT
T ss_pred HHHHHHHHHHHHCCCCEEEECcccc
Confidence 3344444444444443 2334444
No 241
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=67.50 E-value=17 Score=30.21 Aligned_cols=102 Identities=13% Similarity=0.116 Sum_probs=53.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcC-ChHHHHHHHH---
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYT-VPAAVNGNAE--- 76 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS-~p~~~~~~~~--- 76 (213)
||+.+++.+.+.|+++.. +++.+.... .+ ...++.. ..++++++ ..+| +||-.. .|..+.+.+.
T Consensus 14 mG~~~a~~l~~~G~~V~~-~d~~~~~~~-~~--~~~g~~~--~~~~~~~~-----~~aD-vvi~~vp~~~~~~~v~~~~~ 81 (302)
T 2h78_A 14 MGAPMATNLLKAGYLLNV-FDLVQSAVD-GL--VAAGASA--ARSARDAV-----QGAD-VVISMLPASQHVEGLYLDDD 81 (302)
T ss_dssp THHHHHHHHHHTTCEEEE-ECSSHHHHH-HH--HHTTCEE--CSSHHHHH-----TTCS-EEEECCSCHHHHHHHHHSSS
T ss_pred HHHHHHHHHHhCCCeEEE-EcCCHHHHH-HH--HHCCCeE--cCCHHHHH-----hCCC-eEEEECCCHHHHHHHHcCch
Confidence 899999999888998764 465432111 11 1112333 24555544 2578 555554 5666777665
Q ss_pred HHH---hcCCCEEEEcCCCCHH---HHHHHHHccCCcEEEccChh
Q 028115 77 LYS---KVGVPFVMGTTGGDRV---RLHETIENSNVYAVISPQMG 115 (213)
Q Consensus 77 ~~~---~~g~~~ViGTTG~~~~---~~~~~~~~~~~~~v~a~N~S 115 (213)
... +.+. +|+-++..... ++.+.....++.++-+|++.
T Consensus 82 ~~~~~l~~~~-~vi~~st~~~~~~~~l~~~~~~~g~~~~~~pv~~ 125 (302)
T 2h78_A 82 GLLAHIAPGT-LVLECSTIAPTSARKIHAAARERGLAMLDAPVSG 125 (302)
T ss_dssp CGGGSSCSSC-EEEECSCCCHHHHHHHHHHHHHTTCCEEECCEES
T ss_pred hHHhcCCCCc-EEEECCCCCHHHHHHHHHHHHHcCCEEEEEEccC
Confidence 222 2333 45544444433 34433333445566566654
No 242
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=67.42 E-value=13 Score=32.26 Aligned_cols=24 Identities=21% Similarity=0.266 Sum_probs=15.2
Q ss_pred hHHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 68 PAAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 68 p~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
.+++..++++.++.|+. +|.||||
T Consensus 43 ~~~l~~lv~~li~~Gv~Gl~v~GtTG 68 (314)
T 3qze_A 43 WDSLAKLVDFHLQEGTNAIVAVGTTG 68 (314)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESSGGG
T ss_pred HHHHHHHHHHHHHcCCCEEEECcccc
Confidence 35566666666666665 4456777
No 243
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=67.41 E-value=17 Score=29.99 Aligned_cols=72 Identities=11% Similarity=0.055 Sum_probs=44.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+++. +++.+ +.+++..+++.....+ .+..|++.++.+.+.++.+
T Consensus 56 IG~~la~~L~~~G~~V~~-~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 115 (285)
T 2c07_A 56 IGREIAKMLAKSVSHVIC-ISRTQ-------------------KSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKI 115 (285)
T ss_dssp HHHHHHHHHTTTSSEEEE-EESSH-------------------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEE-EcCCH-------------------HHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHH
Confidence 377777777777777765 33221 1122222222211223 2457999999999988877
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 116 ~~~~~~id~li~~Ag~ 131 (285)
T 2c07_A 116 LTEHKNVDILVNNAGI 131 (285)
T ss_dssp HHHCSCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 653 68899988875
No 244
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=67.28 E-value=9.6 Score=27.03 Aligned_cols=52 Identities=8% Similarity=0.080 Sum_probs=32.0
Q ss_pred CCchhHHHhhhhc-CCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCCH
Q 028115 43 LSDRESVLASVFD-KYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDR 94 (213)
Q Consensus 43 ~~~~~~~l~~~~~-~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~~ 94 (213)
..+.++++..+.. ..+|.|++|+..|.. -.+.++...+. .+|+|+-||+...
T Consensus 45 ~~~~~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~ 100 (138)
T 2b4a_A 45 HPSGSAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILTTGRHE 100 (138)
T ss_dssp ESSHHHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEESCC--
T ss_pred eCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCCC
Confidence 3566666666655 579988999998852 34455554443 5677776635543
No 245
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=67.24 E-value=38 Score=30.68 Aligned_cols=71 Identities=13% Similarity=0.092 Sum_probs=41.0
Q ss_pred CCCCEEEEEcC-------C-hHHHHHHHHHHHh--cCCCEEEEcCCC-CHHHHHHHHHccCCcEEEccChhHHHHHHHHH
Q 028115 56 KYPNMIVVDYT-------V-PAAVNGNAELYSK--VGVPFVMGTTGG-DRVRLHETIENSNVYAVISPQMGKQVVAFLAA 124 (213)
Q Consensus 56 ~~~d~VvIDFS-------~-p~~~~~~~~~~~~--~g~~~ViGTTG~-~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l 124 (213)
.+.|.|+++++ . ++.....++...+ .++|+|+...|- ..++..++-+++++|++ ++..-.+..+.++
T Consensus 367 p~vd~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~~g~~~~~~~~~L~~~Gip~~--~spe~Av~al~~l 444 (457)
T 2csu_A 367 PNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFMAGYVSEKAKELLEKNGIPTY--ERPEDVASAAYAL 444 (457)
T ss_dssp TTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEECTTTTHHHHHHHHTTTCCEE--SSHHHHHHHHHHH
T ss_pred CCCCEEEEEccccccccCCchhHHHHHHHHHHHhcCCCCEEEEeCCCcchHHHHHHHHhCCCCcc--CCHHHHHHHHHHH
Confidence 45676777773 2 2333445555554 789999865544 33343444445679988 4555555666666
Q ss_pred HHHH
Q 028115 125 MEIM 128 (213)
Q Consensus 125 ~~~a 128 (213)
+++.
T Consensus 445 ~~~~ 448 (457)
T 2csu_A 445 VEQA 448 (457)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 246
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=67.13 E-value=19 Score=29.51 Aligned_cols=74 Identities=14% Similarity=0.146 Sum_probs=46.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++........ ..++..+++...... .+..|+|.++.+...++.+
T Consensus 40 IG~aia~~la~~G~~V~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 40 IGRAIALELAAAGAKVAVNYASSAG-------------------AADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV 100 (269)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCChH-------------------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4888888888888887643221211 111212222111223 2567999999999999887
Q ss_pred Hhc--CCCEEEEcCCCC
Q 028115 79 SKV--GVPFVMGTTGGD 93 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~~ 93 (213)
.+. ++.+||-..|..
T Consensus 101 ~~~~g~id~lv~nAg~~ 117 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGIT 117 (269)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 765 788999888753
No 247
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=66.74 E-value=31 Score=24.42 Aligned_cols=60 Identities=15% Similarity=0.197 Sum_probs=32.9
Q ss_pred CCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 56 KYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 56 ~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
..||.|++|+..|.. -.+.++...+. .+|+|+-|.-.+.+...+.. ..++--++.-.++.
T Consensus 66 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~-~~ga~~~l~Kp~~~ 128 (146)
T 4dad_A 66 DAFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAM-RAGVRDVLRWPLEP 128 (146)
T ss_dssp TTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHH-TTTEEEEEESSCCH
T ss_pred CCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHH-HhCCceeEcCCCCH
Confidence 578988999998863 33444444443 56766655444444433332 34433344444554
No 248
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=66.72 E-value=15 Score=29.02 Aligned_cols=73 Identities=16% Similarity=0.109 Sum_probs=46.1
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+++....+.+. ..++..+++.....+ .+..|++.++.+...++.+
T Consensus 13 iG~~la~~l~~~G~~v~~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (244)
T 1edo_A 13 IGKAIALSLGKAGCKVLVNYARSAK-------------------AAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTA 73 (244)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH-------------------HHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 4899999998889988764443321 111111111111122 2457999999999888876
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+|+-..|.
T Consensus 74 ~~~~g~id~li~~Ag~ 89 (244)
T 1edo_A 74 IDAWGTIDVVVNNAGI 89 (244)
T ss_dssp HHHSSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 654 68899988874
No 249
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=66.71 E-value=14 Score=31.94 Aligned_cols=23 Identities=26% Similarity=0.619 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
+++..++++.++.|+. +|.||||
T Consensus 29 ~~l~~lv~~li~~Gv~Gl~v~GtTG 53 (313)
T 3dz1_A 29 VSIDRLTDFYAEVGCEGVTVLGILG 53 (313)
T ss_dssp HHHHHHHHHHHHTTCSEEEESTGGG
T ss_pred HHHHHHHHHHHHCCCCEEEeCccCc
Confidence 3444445555555543 3335555
No 250
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=66.70 E-value=12 Score=26.51 Aligned_cols=52 Identities=10% Similarity=0.252 Sum_probs=28.9
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh----cCCCEEEEcCCCCHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRV 95 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~~~ViGTTG~~~~ 95 (213)
.+.++++..+....||.|++|+..|.. -.+.++...+ ..+|+|+-|.-.+.+
T Consensus 33 ~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~ 89 (140)
T 3n53_A 33 KNEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKE 89 (140)
T ss_dssp SSHHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----
T ss_pred CCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHH
Confidence 455666665555679989999998863 3344555444 457777766544443
No 251
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=66.58 E-value=11 Score=26.88 Aligned_cols=48 Identities=17% Similarity=0.200 Sum_probs=29.6
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc----CCCEEEEcCC
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTG 91 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~~~ViGTTG 91 (213)
.+.++++..+....||.|++|+..|.. -.+.++...+. .+|+|+-|.-
T Consensus 34 ~~~~~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 34 FSGEECLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp SSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred CCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 344555555555578988999998853 34555555443 5677765543
No 252
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=66.53 E-value=9.8 Score=25.50 Aligned_cols=50 Identities=14% Similarity=0.079 Sum_probs=29.5
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChH-HHHHHHHHHHh----cCCCEEEEcCCCC
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK----VGVPFVMGTTGGD 93 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~----~g~~~ViGTTG~~ 93 (213)
.+.++++..+....||.|++|+..|. .-.+.++...+ ..+|+|+-|.-.+
T Consensus 32 ~~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~~ 86 (119)
T 2j48_A 32 VDGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEPP 86 (119)
T ss_dssp SCHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSCC
T ss_pred cCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCCC
Confidence 34455555444457898899998874 23445555544 3577766555443
No 253
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=66.49 E-value=28 Score=27.43 Aligned_cols=117 Identities=15% Similarity=-0.019 Sum_probs=59.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHH-HHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE-LYS 79 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~-~~~ 79 (213)
||+.+++.+.+.|++++. ++..+...-+.....+..+..-+..+.+. +.+..-..+| ++|=.+..+.....+. .+.
T Consensus 11 ~G~~la~~L~~~g~~v~v-id~~~~~~~~l~~~~~~~~i~gd~~~~~~-l~~a~i~~ad-~vi~~~~~d~~n~~~~~~a~ 87 (218)
T 3l4b_C 11 TAYYLARSMLSRKYGVVI-INKDRELCEEFAKKLKATIIHGDGSHKEI-LRDAEVSKND-VVVILTPRDEVNLFIAQLVM 87 (218)
T ss_dssp HHHHHHHHHHHTTCCEEE-EESCHHHHHHHHHHSSSEEEESCTTSHHH-HHHHTCCTTC-EEEECCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEE-EECCHHHHHHHHHHcCCeEEEcCCCCHHH-HHhcCcccCC-EEEEecCCcHHHHHHHHHHH
Confidence 588999998888888874 55444211110010112122212233332 3333234678 5665555554444333 344
Q ss_pred h-cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHH
Q 028115 80 K-VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFL 122 (213)
Q Consensus 80 ~-~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~ 122 (213)
+ ++.+-|+.-+-.. +..+.+ +..++-.+++|....+-.+..
T Consensus 88 ~~~~~~~iia~~~~~-~~~~~l-~~~G~d~vi~p~~~~~~~l~~ 129 (218)
T 3l4b_C 88 KDFGVKRVVSLVNDP-GNMEIF-KKMGITTVLNLTTLITNTVEA 129 (218)
T ss_dssp HTSCCCEEEECCCSG-GGHHHH-HHHTCEECCCHHHHHHHHHHH
T ss_pred HHcCCCeEEEEEeCc-chHHHH-HHCCCCEEECHHHHHHHHHHH
Confidence 4 5777666544332 222333 345667788888776654433
No 254
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=66.30 E-value=19 Score=30.93 Aligned_cols=24 Identities=33% Similarity=0.328 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 68 PAAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 68 p~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
.+++..++++.++.|+. +|.||||
T Consensus 36 ~~~l~~lv~~li~~Gv~gl~v~GttG 61 (304)
T 3cpr_A 36 IAAGREVAAYLVDKGLDSLVLAGTTG 61 (304)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTT
T ss_pred HHHHHHHHHHHHHcCCCEEEECcccc
Confidence 35677777777777775 3567777
No 255
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=66.10 E-value=26 Score=28.74 Aligned_cols=52 Identities=15% Similarity=0.111 Sum_probs=36.6
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCC-EEEEcCCCCHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVR 96 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~-~ViGTTG~~~~~ 96 (213)
.|....+.++....|| +|+=++.+..+...++.+.+.|+. .++|+.+|...+
T Consensus 180 ~d~~~~~~~l~~~~~d-~i~~~~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ 232 (346)
T 1usg_A 180 KDFSALIARLKKENID-FVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 232 (346)
T ss_dssp CCCHHHHHHHHHTTCC-EEEEESCHHHHHHHHHHHHHTTCCCEEEECGGGCCTT
T ss_pred cCHHHHHHHHHhcCCC-EEEEcCcchHHHHHHHHHHHcCCCCeEEecCCCCcHH
Confidence 3555556666666799 677677667777899999988753 377888886443
No 256
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=66.08 E-value=19 Score=32.79 Aligned_cols=108 Identities=17% Similarity=0.119 Sum_probs=56.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccC-----ceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh-HHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCG-----KEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP-AAVNGN 74 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~-----~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p-~~~~~~ 74 (213)
||+.++..+.+.|+++. ++++.+..........+ .++.. ..++++++.++ ..+| +||=..-+ ..+.+.
T Consensus 12 mG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~g~~~~~~~i~~--~~~~~e~v~~l--~~aD-vVilaVp~~~~v~~v 85 (478)
T 1pgj_A 12 MGANLALNIAEKGFKVA-VFNRTYSKSEEFMKANASAPFAGNLKA--FETMEAFAASL--KKPR-KALILVQAGAATDST 85 (478)
T ss_dssp HHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHTTTSTTGGGEEE--CSCHHHHHHHB--CSSC-EEEECCCCSHHHHHH
T ss_pred HHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHhcCCCCCCCCeEE--ECCHHHHHhcc--cCCC-EEEEecCChHHHHHH
Confidence 89999999888888865 45654322111111001 11332 35676655432 2478 55555444 456666
Q ss_pred HHHH---HhcCCCEEEEcCCCCH--HHHHHHHHccCCcEEEccCh
Q 028115 75 AELY---SKVGVPFVMGTTGGDR--VRLHETIENSNVYAVISPQM 114 (213)
Q Consensus 75 ~~~~---~~~g~~~ViGTTG~~~--~~~~~~~~~~~~~~v~a~N~ 114 (213)
++.. ++.+..+|.++||... +++.+..+..++..+-+|++
T Consensus 86 l~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~ 130 (478)
T 1pgj_A 86 IEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGIS 130 (478)
T ss_dssp HHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred HHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeecc
Confidence 6543 3456677778888743 23433333333333334443
No 257
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=65.94 E-value=22 Score=28.29 Aligned_cols=72 Identities=14% Similarity=0.124 Sum_probs=47.3
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+++.. ++... ..++...++.....+ .+..|++.++.+...++.+
T Consensus 17 IG~~~a~~l~~~G~~v~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 17 IGFEVAHALASKGATVVGT-ATSQA-------------------SAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4889999988889988753 32211 112222222112223 3567999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 77 ~~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 77 KAENLAIDILVNNAGI 92 (247)
T ss_dssp HHTTCCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 765 58899988885
No 258
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=65.84 E-value=15 Score=30.32 Aligned_cols=72 Identities=15% Similarity=0.189 Sum_probs=47.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..|+.. ++... .+++..+++...... .+..|+|.++.+...++.+
T Consensus 16 IG~aia~~la~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 75 (264)
T 3tfo_A 16 IGEGIARELGVAGAKILLG-ARRQA-------------------RIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAA 75 (264)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSHH-------------------HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCHH-------------------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4899999988889987753 33221 122222222211222 2457999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 76 ~~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 76 VDTWGRIDVLVNNAGV 91 (264)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 765 78899988875
No 259
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=65.83 E-value=29 Score=28.65 Aligned_cols=82 Identities=16% Similarity=0.083 Sum_probs=44.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCC-hHHHHHHH---H
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTV-PAAVNGNA---E 76 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~-p~~~~~~~---~ 76 (213)
||+.+++.+.+.|+++. ++++.+..... + ...++.. ..++++++. .+| +||-... |..+.+.+ +
T Consensus 12 mG~~~a~~l~~~G~~V~-~~dr~~~~~~~-~--~~~g~~~--~~~~~~~~~-----~aD-vvi~~vp~~~~~~~v~~~~~ 79 (287)
T 3pef_A 12 MGSAMAKNLVKAGCSVT-IWNRSPEKAEE-L--AALGAER--AATPCEVVE-----SCP-VTFAMLADPAAAEEVCFGKH 79 (287)
T ss_dssp HHHHHHHHHHHTTCEEE-EECSSGGGGHH-H--HHTTCEE--CSSHHHHHH-----HCS-EEEECCSSHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHCCCeEE-EEcCCHHHHHH-H--HHCCCee--cCCHHHHHh-----cCC-EEEEEcCCHHHHHHHHcCcc
Confidence 79999999888899887 45655432111 1 1113333 246666553 468 4444443 66676666 3
Q ss_pred H---HHhcCCCEEEEcCCCCHH
Q 028115 77 L---YSKVGVPFVMGTTGGDRV 95 (213)
Q Consensus 77 ~---~~~~g~~~ViGTTG~~~~ 95 (213)
. +++.+. +|+-+++.+..
T Consensus 80 ~l~~~l~~~~-~vi~~st~~~~ 100 (287)
T 3pef_A 80 GVLEGIGEGR-GYVDMSTVDPA 100 (287)
T ss_dssp CHHHHCCTTC-EEEECSCCCHH
T ss_pred hHhhcCCCCC-EEEeCCCCCHH
Confidence 2 233444 44444555443
No 260
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=65.83 E-value=20 Score=31.43 Aligned_cols=23 Identities=26% Similarity=0.439 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
+++..++++.++.|+. +|.||||
T Consensus 52 ~~l~~lv~~li~~Gv~Gl~v~GtTG 76 (343)
T 2v9d_A 52 PGTAALIDDLIKAGVDGLFFLGSGG 76 (343)
T ss_dssp HHHHHHHHHHHHTTCSCEEESSTTT
T ss_pred HHHHHHHHHHHHcCCCEEEeCcccc
Confidence 4555666666666654 3446666
No 261
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=65.69 E-value=11 Score=31.83 Aligned_cols=52 Identities=10% Similarity=0.036 Sum_probs=34.3
Q ss_pred EEEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCHH--HHHHHHHccCCcEEEccC
Q 028115 60 MIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRV--RLHETIENSNVYAVISPQ 113 (213)
Q Consensus 60 ~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~~--~~~~~~~~~~~~~v~a~N 113 (213)
.+.||=+.|+.+..-++.| .|.++|=-.+|+.+. ++-.++.+.+.|+++-++
T Consensus 71 pisIDT~~~~v~~aAl~a~--~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 71 TLCLDSTNIKAIEAGLKKC--KNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp EEEEECSCHHHHHHHHHHC--SSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESC
T ss_pred eEEEeCCCHHHHHHHHhhC--CCCCEEEECCCCcccHHHHHHHHHHhCCcEEEEcC
Confidence 3678888888776666655 488888877887432 455555666777766543
No 262
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=65.66 E-value=8 Score=33.02 Aligned_cols=14 Identities=21% Similarity=0.363 Sum_probs=8.6
Q ss_pred cCCCEEEEcCCCCH
Q 028115 81 VGVPFVMGTTGGDR 94 (213)
Q Consensus 81 ~g~~~ViGTTG~~~ 94 (213)
.++|+|+||.+.+-
T Consensus 68 grvpviaGvg~~~t 81 (294)
T 2ehh_A 68 GRIKVIAGTGGNAT 81 (294)
T ss_dssp TSSEEEEECCCSCH
T ss_pred CCCcEEEecCCCCH
Confidence 34667777666553
No 263
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=65.65 E-value=26 Score=28.16 Aligned_cols=74 Identities=15% Similarity=0.199 Sum_probs=46.1
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|..++....+..... + .+.+.+.+. ......+..|+|.++.+.+.++.+.+
T Consensus 19 IG~~~a~~l~~~G~~v~~~~~~~~~~~-~---------------~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~ 81 (264)
T 3i4f_A 19 LGKQVTEKLLAKGYSVTVTYHSDTTAM-E---------------TMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMS 81 (264)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHH-H---------------HHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEEEcCCChHHH-H---------------HHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 488999998888988875433221100 0 001111110 01122356899999999999988877
Q ss_pred c--CCCEEEEcCC
Q 028115 81 V--GVPFVMGTTG 91 (213)
Q Consensus 81 ~--g~~~ViGTTG 91 (213)
. ++.+||-..|
T Consensus 82 ~~g~id~lv~~Ag 94 (264)
T 3i4f_A 82 HFGKIDFLINNAG 94 (264)
T ss_dssp HHSCCCEEECCCC
T ss_pred HhCCCCEEEECCc
Confidence 5 7889998888
No 264
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=65.59 E-value=23 Score=28.39 Aligned_cols=73 Identities=16% Similarity=0.216 Sum_probs=46.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+++....+... .+++..+++.....+ .+..|.+.++.+...++.+
T Consensus 16 iG~~ia~~l~~~G~~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (246)
T 2uvd_A 16 IGRAIAIDLAKQGANVVVNYAGNEQ-------------------KANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQT 76 (246)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHH-------------------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4899999988889888753211211 111212222111223 2456999999999988877
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+|+-..|.
T Consensus 77 ~~~~g~id~lv~nAg~ 92 (246)
T 2uvd_A 77 VDVFGQVDILVNNAGV 92 (246)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 664 68899988885
No 265
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=65.48 E-value=16 Score=29.78 Aligned_cols=83 Identities=16% Similarity=0.013 Sum_probs=46.5
Q ss_pred ChHHHHHHHHhC-CCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh--------HHH
Q 028115 1 MGKAVIKAADAA-GLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP--------AAV 71 (213)
Q Consensus 1 MG~~i~~~~~~~-~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p--------~~~ 71 (213)
+|+.+++.+.+. +.++++..- .+.... .+.-.+..+...+..|.+.. .+.. ..+| +||....+ ..+
T Consensus 12 iG~~l~~~L~~~~g~~V~~~~R-~~~~~~-~~~~~~v~~~~~D~~d~~~l-~~~~-~~~d-~vi~~a~~~~~~~~~~~~~ 86 (289)
T 3e48_A 12 LGTHITNQAIANHIDHFHIGVR-NVEKVP-DDWRGKVSVRQLDYFNQESM-VEAF-KGMD-TVVFIPSIIHPSFKRIPEV 86 (289)
T ss_dssp HHHHHHHHHHHTTCTTEEEEES-SGGGSC-GGGBTTBEEEECCTTCHHHH-HHHT-TTCS-EEEECCCCCCSHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCcEEEEEC-CHHHHH-HhhhCCCEEEEcCCCCHHHH-HHHH-hCCC-EEEEeCCCCccchhhHHHH
Confidence 388999997765 899887543 221111 11001111111122344443 3322 3678 78887654 567
Q ss_pred HHHHHHHHhcCCCEEEE
Q 028115 72 NGNAELYSKVGVPFVMG 88 (213)
Q Consensus 72 ~~~~~~~~~~g~~~ViG 88 (213)
...++.|.+.|++-++-
T Consensus 87 ~~l~~aa~~~gv~~iv~ 103 (289)
T 3e48_A 87 ENLVYAAKQSGVAHIIF 103 (289)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 78899999999874443
No 266
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=65.41 E-value=27 Score=28.77 Aligned_cols=72 Identities=21% Similarity=0.208 Sum_probs=47.3
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCC--CCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY--PNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~--~d~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..|+.. ++... .+++..+++.... ...+..|.|.++.+.+.++.+
T Consensus 44 IG~aia~~la~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 44 IGKKVALAYAEAGAQVAVA-ARHSD-------------------ALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQM 103 (276)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSGG-------------------GGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4888999888888887643 33221 1122222221112 223567999999999999988
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 104 ~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 104 TGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 775 78999988885
No 267
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=65.30 E-value=20 Score=30.59 Aligned_cols=23 Identities=22% Similarity=0.031 Sum_probs=18.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCC
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTE 24 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~ 24 (213)
||+.+++.+.+.|++|.. .++.+
T Consensus 14 MG~~mA~~L~~~G~~v~v-~dr~~ 36 (300)
T 3obb_A 14 MGAPMATNLLKAGYLLNV-FDLVQ 36 (300)
T ss_dssp THHHHHHHHHHTTCEEEE-ECSSH
T ss_pred HHHHHHHHHHhCCCeEEE-EcCCH
Confidence 999999999999999874 56544
No 268
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=65.30 E-value=24 Score=28.42 Aligned_cols=41 Identities=20% Similarity=0.463 Sum_probs=29.7
Q ss_pred HhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcC
Q 028115 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTT 90 (213)
++.+....+|.+|+--..++...+.++.+.+.|+|+|+--+
T Consensus 62 i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~ 102 (304)
T 3gbv_A 62 SQAVIEEQPDGVMFAPTVPQYTKGFTDALNELGIPYIYIDS 102 (304)
T ss_dssp HHHHHTTCCSEEEECCSSGGGTHHHHHHHHHHTCCEEEESS
T ss_pred HHHHHhcCCCEEEECCCChHHHHHHHHHHHHCCCeEEEEeC
Confidence 44444567896566666666778889999999999987544
No 269
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=65.29 E-value=12 Score=26.01 Aligned_cols=50 Identities=10% Similarity=0.082 Sum_probs=31.1
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc----CCCEEEEcCCCC
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGD 93 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~~~ViGTTG~~ 93 (213)
.+.+++++.+....||.|++|...|.. -.+.++...+. .+|+|+-|.--+
T Consensus 34 ~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~ 88 (127)
T 3i42_A 34 MSGTDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFAK 88 (127)
T ss_dssp SSHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-C
T ss_pred CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCcc
Confidence 456666666666679988999998753 34555555553 456555444333
No 270
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=65.21 E-value=13 Score=25.92 Aligned_cols=66 Identities=14% Similarity=0.122 Sum_probs=33.1
Q ss_pred HHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHccC-CcEEEccChhH
Q 028115 49 VLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGK 116 (213)
Q Consensus 49 ~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~~~~~~~~~~~~~-~~~v~a~N~Sl 116 (213)
++..+....||.|++|...|.. -.+.++...+. .+|+|+-|.--+.+...... ..+ ...+.-| ++.
T Consensus 38 a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~kp-~~~ 107 (134)
T 3f6c_A 38 AVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCA-DAGANGFVSKK-EGM 107 (134)
T ss_dssp HHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHH-HTTCSEEEEGG-GCT
T ss_pred HHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHH-HhCCCEEEeCC-CCH
Confidence 3444444579988999998863 34445544443 45655544433333333332 344 3444444 444
No 271
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=65.15 E-value=16 Score=31.94 Aligned_cols=108 Identities=10% Similarity=0.059 Sum_probs=60.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccc------cccc-cccCc----eeEeecCCchhHHHhhhhcCCCCEEEEEcCChH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEES------GQKV-EVCGK----EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPA 69 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~------g~~~-~~~~~----~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~ 69 (213)
||..++..+.+.|+++.. +++.+... +... ...+. .+.. ..|+++++ ..+| +||=..-+.
T Consensus 40 mG~alA~~La~~G~~V~l-~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~--t~d~~ea~-----~~aD-vVilaVp~~ 110 (356)
T 3k96_A 40 WGTALALVLARKGQKVRL-WSYESDHVDEMQAEGVNNRYLPNYPFPETLKA--YCDLKASL-----EGVT-DILIVVPSF 110 (356)
T ss_dssp HHHHHHHHHHTTTCCEEE-ECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE--ESCHHHHH-----TTCC-EEEECCCHH
T ss_pred HHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHcCCCcccCCCCccCCCeEE--ECCHHHHH-----hcCC-EEEECCCHH
Confidence 789999888888888763 45433211 1100 01111 1222 24666544 2578 677666666
Q ss_pred HHHHHHHHHHh---cCCCEEEEcCCCCHH------HHHHHHHccCCcEEEccChhHH
Q 028115 70 AVNGNAELYSK---VGVPFVMGTTGGDRV------RLHETIENSNVYAVISPQMGKQ 117 (213)
Q Consensus 70 ~~~~~~~~~~~---~g~~~ViGTTG~~~~------~~~~~~~~~~~~~v~a~N~SlG 117 (213)
.+.+.++.... .+..+|..+.|+..+ .+++......+.++..|||.--
T Consensus 111 ~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~~a~e 167 (356)
T 3k96_A 111 AFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATE 167 (356)
T ss_dssp HHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSCCHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECccHHHH
Confidence 66666665443 466788899998753 2222211122456778998754
No 272
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=65.04 E-value=8.1 Score=32.96 Aligned_cols=15 Identities=20% Similarity=0.388 Sum_probs=9.8
Q ss_pred cCCCEEEEcCCCCHH
Q 028115 81 VGVPFVMGTTGGDRV 95 (213)
Q Consensus 81 ~g~~~ViGTTG~~~~ 95 (213)
.++|+|+||.+.+-+
T Consensus 69 gr~pviaGvg~~~t~ 83 (292)
T 2ojp_A 69 GRIPVIAGTGANATA 83 (292)
T ss_dssp TSSCEEEECCCSSHH
T ss_pred CCCcEEEecCCccHH
Confidence 457777777776643
No 273
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=64.78 E-value=33 Score=26.30 Aligned_cols=73 Identities=11% Similarity=0.126 Sum_probs=40.7
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlG 117 (213)
.+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+=|.--+.+...... ..+.--++.-.|+..
T Consensus 38 ~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~-~~Ga~~~l~Kp~~~~ 113 (215)
T 1a04_A 38 SNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTAL-KRGADGYLLKDMEPE 113 (215)
T ss_dssp SSHHHHHHHHHHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECCCCHHHHHHHH-HTTCSEEEETTCCHH
T ss_pred CCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHH-HcCCcEEEeCCCCHH
Confidence 455555555555579988999999863 34555555554 45666555444444433333 345333444445543
No 274
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=64.66 E-value=54 Score=26.35 Aligned_cols=39 Identities=21% Similarity=0.194 Sum_probs=26.0
Q ss_pred hhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcC
Q 028115 52 SVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 52 ~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTT 90 (213)
.+....+|.+|+--+.++...+.++.+.+.|+|+|+--+
T Consensus 54 ~~~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~ 92 (309)
T 2fvy_A 54 VLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNK 92 (309)
T ss_dssp HHHHTTCSEEEECCSSGGGHHHHHHHHHTTTCCEEEESS
T ss_pred HHHHcCCCEEEEeCCCcchhHHHHHHHHHCCCcEEEecC
Confidence 333457885555444555566788888899999887443
No 275
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=64.53 E-value=36 Score=24.37 Aligned_cols=62 Identities=18% Similarity=0.194 Sum_probs=34.9
Q ss_pred CCchhHHHhhhhcCCC-CEEEEEcCChHH-HHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHcc
Q 028115 43 LSDRESVLASVFDKYP-NMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENS 104 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~-d~VvIDFS~p~~-~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~ 104 (213)
..+.+++++.+....| |.|++|...|.. -.+.++...+ ..+|+|+-|...+.+...+..+..
T Consensus 33 ~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g 98 (151)
T 3kcn_A 33 CESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEG 98 (151)
T ss_dssp ESSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHT
T ss_pred eCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcC
Confidence 3466666665555555 988999998753 2334444333 356666665545444444443333
No 276
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=64.41 E-value=52 Score=26.16 Aligned_cols=38 Identities=8% Similarity=0.001 Sum_probs=25.3
Q ss_pred HhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcC
Q 028115 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTT 90 (213)
+..+....+|.+|+--+.+ .+.++.+.+.++|+|+--.
T Consensus 56 ~~~l~~~~vdgiIi~~~~~---~~~~~~l~~~~iPvV~i~~ 93 (276)
T 3jy6_A 56 LRAIGSRGFDGLILQSFSN---PQTVQEILHQQMPVVSVDR 93 (276)
T ss_dssp HHHHHTTTCSEEEEESSCC---HHHHHHHHTTSSCEEEESC
T ss_pred HHHHHhCCCCEEEEecCCc---HHHHHHHHHCCCCEEEEec
Confidence 3444456789545544444 6788888899999887543
No 277
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=64.35 E-value=20 Score=31.27 Aligned_cols=24 Identities=21% Similarity=0.214 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 68 PAAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 68 p~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
.+++..++++.++.|+. +|.||||
T Consensus 54 ~~~l~~lv~~li~~Gv~Gl~v~GtTG 79 (332)
T 2r8w_A 54 IEAFSALIARLDAAEVDSVGILGSTG 79 (332)
T ss_dssp HHHHHHHHHHHHHHTCSEEEESSTTT
T ss_pred HHHHHHHHHHHHHcCCCEEEECcccc
Confidence 35667777777777775 3457777
No 278
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=64.30 E-value=31 Score=29.97 Aligned_cols=68 Identities=9% Similarity=-0.024 Sum_probs=48.8
Q ss_pred EEE-EcCChHHHHHHHHHHHhcCC---CEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHHHHHHHHHH
Q 028115 61 IVV-DYTVPAAVNGNAELYSKVGV---PFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAE 130 (213)
Q Consensus 61 VvI-DFS~p~~~~~~~~~~~~~g~---~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~~l~~~aa~ 130 (213)
+.| |-.+|+.=.+.++.|++.+. ++|=-.+|...+++-.++.+.+.|+++-++-. ++.+.++++.+.+
T Consensus 125 lsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~~~~~~~~~aa~~g~~vv~m~~~d--v~~l~~~~~~a~~ 196 (310)
T 2h9a_B 125 LMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKDNYKPIVATCMVHGHSVVASAPLD--INLSKQLNIMIME 196 (310)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTTTHHHHHHHHHHHTCEEEEECSSC--HHHHHHHHHHHHT
T ss_pred EEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCCccHHHHHHHHHhCCCEEEEChhH--HHHHHHHHHHHHH
Confidence 788 99666666666666666655 58889999888888888888888887655422 4777777766653
No 279
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=64.09 E-value=18 Score=30.74 Aligned_cols=23 Identities=30% Similarity=0.268 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
+++..++++.++.|+. +|.||||
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttG 46 (291)
T 3a5f_A 22 DKLSELIEWHIKSKTDAIIVCGTTG 46 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGG
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc
Confidence 4555666666666654 2446666
No 280
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=64.08 E-value=15 Score=30.23 Aligned_cols=73 Identities=21% Similarity=0.212 Sum_probs=46.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..++....+... ..++..+.+...... .+..|.|.++.+...++.+
T Consensus 39 IG~aia~~la~~G~~Vv~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 99 (267)
T 3u5t_A 39 IGAAIAARLASDGFTVVINYAGKAA-------------------AAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATA 99 (267)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSCSH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH-------------------HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4788888888778887753232211 111211121111223 2457999999999999988
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 100 ~~~~g~iD~lvnnAG~ 115 (267)
T 3u5t_A 100 EEAFGGVDVLVNNAGI 115 (267)
T ss_dssp HHHHSCEEEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 775 68889888875
No 281
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=63.99 E-value=19 Score=30.88 Aligned_cols=14 Identities=14% Similarity=0.401 Sum_probs=8.0
Q ss_pred cCCCEEEEcCCCCH
Q 028115 81 VGVPFVMGTTGGDR 94 (213)
Q Consensus 81 ~g~~~ViGTTG~~~ 94 (213)
.++|+|+||.+.+.
T Consensus 80 grvpViaGvg~~st 93 (306)
T 1o5k_A 80 GKIPVIVGAGTNST 93 (306)
T ss_dssp TSSCEEEECCCSCH
T ss_pred CCCeEEEcCCCccH
Confidence 34666666666553
No 282
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=63.64 E-value=23 Score=28.29 Aligned_cols=73 Identities=8% Similarity=-0.013 Sum_probs=46.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++....+... ..++.+.++.....+ .+..|.+.++.+...++.+
T Consensus 25 iG~~ia~~l~~~G~~v~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (256)
T 3ezl_A 25 IGTSICQRLHKDGFRVVAGCGPNSP-------------------RRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKV 85 (256)
T ss_dssp HHHHHHHHHHHTTEEEEEEECTTCS-------------------SHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHH-------------------HHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHH
Confidence 4889999988889888754322211 111112222111222 3567999999999999887
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 86 ~~~~g~id~lv~~Ag~ 101 (256)
T 3ezl_A 86 KAEVGEIDVLVNNAGI 101 (256)
T ss_dssp HHHTCCEEEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 765 67788888774
No 283
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=63.63 E-value=14 Score=31.78 Aligned_cols=43 Identities=5% Similarity=-0.092 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHccCCcEEE
Q 028115 68 PAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVI 110 (213)
Q Consensus 68 p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~ 110 (213)
|..+.+.++.+.++++++|.--+.++..-.+.|++..+++++.
T Consensus 225 ~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~e~g~~v~~ 267 (312)
T 2o1e_A 225 AASLAKLKTYAKEHNVKVIYFEEIASSKVADTLASEIGAKTEV 267 (312)
T ss_dssp HHHHHHHHHHTTSSCCCEEECSSCCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCcEEE
Confidence 4555666666666666666666666655555555555555543
No 284
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=63.48 E-value=29 Score=27.66 Aligned_cols=71 Identities=17% Similarity=0.067 Sum_probs=45.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|.+++.. ++.. ...++..+++ ......+..|++.++.+.+.++.+.+
T Consensus 24 iG~~~a~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 24 LGLATAERLVGQGASAVLL-DLPN-------------------SGGEAQAKKL-GNNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECTT-------------------SSHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCc-------------------HhHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4888998888888887753 3322 1222222222 11222356799999999998887765
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+||-..|.
T Consensus 83 ~~g~id~li~~Ag~ 96 (265)
T 2o23_A 83 KFGRVDVAVNCAGI 96 (265)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HCCCCCEEEECCcc
Confidence 4 78899988774
No 285
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=63.46 E-value=38 Score=24.22 Aligned_cols=72 Identities=10% Similarity=0.186 Sum_probs=40.5
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
.+.+++++.+....||.|++|+..|.. -.+.++...+. .+|+|+-|.--+.+......+ .++--++.-.++.
T Consensus 48 ~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l~Kp~~~ 122 (152)
T 3eul_A 48 DDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQ-QGAAGFLLKDSTR 122 (152)
T ss_dssp SSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHH-TTCSEEEETTCCH
T ss_pred CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHH-cCCCEEEecCCCH
Confidence 466666666655679988999998753 34455555443 466666555444544434333 4533333333444
No 286
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=63.41 E-value=26 Score=28.67 Aligned_cols=72 Identities=21% Similarity=0.158 Sum_probs=48.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|..++.. ++.. +.+++...++ ......+..|.|.++.+...++.+.+
T Consensus 23 IG~aia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (271)
T 3tzq_B 23 IGLETSRVLARAGARVVLA-DLPE-------------------TDLAGAAASV-GRGAVHHVVDLTNEVSVRALIDFTID 81 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECTT-------------------SCHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCH-------------------HHHHHHHHHh-CCCeEEEECCCCCHHHHHHHHHHHHH
Confidence 4889999988889887743 3322 1222222222 11222367899999999999988877
Q ss_pred c--CCCEEEEcCCCC
Q 028115 81 V--GVPFVMGTTGGD 93 (213)
Q Consensus 81 ~--g~~~ViGTTG~~ 93 (213)
. ++.+++-..|..
T Consensus 82 ~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 82 TFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 5 788999877753
No 287
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=63.37 E-value=62 Score=26.62 Aligned_cols=38 Identities=13% Similarity=0.248 Sum_probs=25.6
Q ss_pred hhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEc
Q 028115 52 SVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGT 89 (213)
Q Consensus 52 ~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGT 89 (213)
.+....+|.+|+--+.++.+.+.++.+.+.++|+|+--
T Consensus 57 ~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 94 (325)
T 2x7x_A 57 YFMDEGVDLLIISANEAAPMTPIVEEAYQKGIPVILVD 94 (325)
T ss_dssp HHHHTTCSEEEECCSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEeC
Confidence 33345788555544555556677888888999988743
No 288
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=63.37 E-value=17 Score=31.52 Aligned_cols=12 Identities=33% Similarity=0.562 Sum_probs=6.1
Q ss_pred CCCEEEEcCCCC
Q 028115 82 GVPFVMGTTGGD 93 (213)
Q Consensus 82 g~~~ViGTTG~~ 93 (213)
++|+|+||.+.+
T Consensus 91 rvpViaGvg~~s 102 (315)
T 3si9_A 91 RVPVVAGAGSNS 102 (315)
T ss_dssp SSCBEEECCCSS
T ss_pred CCcEEEeCCCCC
Confidence 455555555544
No 289
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=63.35 E-value=23 Score=24.57 Aligned_cols=48 Identities=17% Similarity=0.185 Sum_probs=27.4
Q ss_pred chhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh---cCCCEEEEcCCCC
Q 028115 45 DRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK---VGVPFVMGTTGGD 93 (213)
Q Consensus 45 ~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~---~g~~~ViGTTG~~ 93 (213)
+.++++..+....||.|++|+..|.. -.+.++...+ ...|+|+ .|+..
T Consensus 36 ~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~~ii~-ls~~~ 87 (130)
T 1dz3_A 36 NGQDCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIM-LTAFG 87 (130)
T ss_dssp SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHHCSSCCEEEE-EEETT
T ss_pred CHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCcEEE-EecCC
Confidence 44555554444578988999998852 3344554444 2344544 45544
No 290
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=63.33 E-value=7.7 Score=32.79 Aligned_cols=107 Identities=9% Similarity=0.080 Sum_probs=53.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+...|+++.. +++.+.... .+ ...++......++++.+ ..+| +||..+.+..+.+..-...+
T Consensus 168 iG~~~a~~l~~~G~~V~~-~d~~~~~~~-~~--~~~g~~~~~~~~l~~~l-----~~aD-vVi~~~p~~~i~~~~~~~mk 237 (300)
T 2rir_A 168 TGMTIARTFAALGANVKV-GARSSAHLA-RI--TEMGLVPFHTDELKEHV-----KDID-ICINTIPSMILNQTVLSSMT 237 (300)
T ss_dssp HHHHHHHHHHHTTCEEEE-EESSHHHHH-HH--HHTTCEEEEGGGHHHHS-----TTCS-EEEECCSSCCBCHHHHTTSC
T ss_pred HHHHHHHHHHHCCCEEEE-EECCHHHHH-HH--HHCCCeEEchhhHHHHh-----hCCC-EEEECCChhhhCHHHHHhCC
Confidence 689999988888898764 455432110 00 00122221123444433 3678 78887766433221111222
Q ss_pred cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHH
Q 028115 81 VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQV 118 (213)
Q Consensus 81 ~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv 118 (213)
.+.-+|--..|-...++ +..+..++.++..||++-++
T Consensus 238 ~g~~lin~a~g~~~~~~-~~a~~~G~~~i~~pg~~g~v 274 (300)
T 2rir_A 238 PKTLILDLASRPGGTDF-KYAEKQGIKALLAPGLPGIV 274 (300)
T ss_dssp TTCEEEECSSTTCSBCH-HHHHHHTCEEEECCCHHHHH
T ss_pred CCCEEEEEeCCCCCcCH-HHHHHCCCEEEECCCCCCcH
Confidence 33323322223111123 33344567777899988766
No 291
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=63.20 E-value=32 Score=23.35 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=29.5
Q ss_pred chhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh-cCCCEEEEcCCCCHHHH
Q 028115 45 DRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK-VGVPFVMGTTGGDRVRL 97 (213)
Q Consensus 45 ~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~-~g~~~ViGTTG~~~~~~ 97 (213)
+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+=|.-.+.+..
T Consensus 34 ~~~~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~ 88 (122)
T 1zgz_A 34 SGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDR 88 (122)
T ss_dssp SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSCCHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCCChhhH
Confidence 33444444444578988999998852 2344444443 34666655544444433
No 292
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=63.14 E-value=16 Score=31.97 Aligned_cols=83 Identities=19% Similarity=0.154 Sum_probs=49.9
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccccccc-c-----------ccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCC
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKV-E-----------VCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTV 67 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~-~-----------~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~ 67 (213)
+|+.+++.+. .++++|++..+.. ...|+.+ . ..+..+.+... +.+. + ...| +++.-+-
T Consensus 16 iG~~llr~L~~~p~~elvai~~s~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~----~--~~vD-vVf~atp 86 (350)
T 2ep5_A 16 VGQKMVKMLAKHPYLELVKVSASP-SKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYED----H--KDVD-VVLSALP 86 (350)
T ss_dssp HHHHHHHHHTTCSSEEEEEEECCG-GGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGGG----G--TTCS-EEEECCC
T ss_pred HHHHHHHHHHhCCCcEEEEEecCh-hhcCCCHHHhcCcccccccccCCceeEEeeC-CHHH----h--cCCC-EEEECCC
Confidence 5899999887 6789999876321 1222222 0 00112223211 2221 2 2578 7775555
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCC
Q 028115 68 PAAVNGNAELYSKVGVPFVMGTTGG 92 (213)
Q Consensus 68 p~~~~~~~~~~~~~g~~~ViGTTG~ 92 (213)
.....+.++.+++.|+++|..+.-|
T Consensus 87 ~~~s~~~a~~~~~aG~~VId~s~~~ 111 (350)
T 2ep5_A 87 NELAESIELELVKNGKIVVSNASPF 111 (350)
T ss_dssp HHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred hHHHHHHHHHHHHCCCEEEECCccc
Confidence 5778899999999999988776644
No 293
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=62.95 E-value=14 Score=32.02 Aligned_cols=23 Identities=30% Similarity=0.372 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
+++..++++.++.|+. +|.||||
T Consensus 45 ~~l~~lv~~li~~Gv~Gi~v~GtTG 69 (315)
T 3na8_A 45 PALGRSIERLIDGGVHAIAPLGSTG 69 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGG
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc
Confidence 4555555555555554 3455555
No 294
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=62.90 E-value=16 Score=30.00 Aligned_cols=79 Identities=15% Similarity=0.071 Sum_probs=42.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcC-ChHHHHHHHH---
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYT-VPAAVNGNAE--- 76 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS-~p~~~~~~~~--- 76 (213)
||+.+++.+.+.|+++. +++ .+.... .+ ...++.. ..++++++. .+| +||-.+ .|..+...+.
T Consensus 14 ~G~~~a~~l~~~g~~V~-~~~-~~~~~~-~~--~~~g~~~--~~~~~~~~~-----~~D-~vi~~vp~~~~~~~v~~~~~ 80 (295)
T 1yb4_A 14 MGSPMAINLARAGHQLH-VTT-IGPVAD-EL--LSLGAVN--VETARQVTE-----FAD-IIFIMVPDTPQVEDVLFGEH 80 (295)
T ss_dssp THHHHHHHHHHTTCEEE-ECC-SSCCCH-HH--HTTTCBC--CSSHHHHHH-----TCS-EEEECCSSHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhCCCEEE-EEc-CHHHHH-HH--HHcCCcc--cCCHHHHHh-----cCC-EEEEECCCHHHHHHHHhCch
Confidence 89999999888889886 345 332211 11 1112222 235555442 578 555555 5555566554
Q ss_pred H---HHhcCCCEEEEcCCC
Q 028115 77 L---YSKVGVPFVMGTTGG 92 (213)
Q Consensus 77 ~---~~~~g~~~ViGTTG~ 92 (213)
. +++.+..+|.-+||.
T Consensus 81 ~l~~~l~~~~~vv~~s~~~ 99 (295)
T 1yb4_A 81 GCAKTSLQGKTIVDMSSIS 99 (295)
T ss_dssp SSTTSCCTTEEEEECSCCC
T ss_pred hHhhcCCCCCEEEECCCCC
Confidence 1 233455566666664
No 295
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=62.86 E-value=21 Score=30.42 Aligned_cols=12 Identities=42% Similarity=0.681 Sum_probs=6.2
Q ss_pred CCCEEEEcCCCC
Q 028115 82 GVPFVMGTTGGD 93 (213)
Q Consensus 82 g~~~ViGTTG~~ 93 (213)
++|+|.|+.+.+
T Consensus 71 rvpviaGvg~~~ 82 (292)
T 3daq_A 71 RVPVIAGTGTND 82 (292)
T ss_dssp SSCEEEECCCSC
T ss_pred CCcEEEeCCccc
Confidence 455555555444
No 296
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=62.79 E-value=4.7 Score=30.07 Aligned_cols=52 Identities=17% Similarity=0.249 Sum_probs=37.1
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhcCCCEEEEcCCCCHH
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKVGVPFVMGTTGGDRV 95 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~g~~~ViGTTG~~~~ 95 (213)
+.+-+++++.+....||.|+.|..-|.. =.+.++...+.++|+|+ .||+++.
T Consensus 39 a~~g~eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~-lTa~~~~ 91 (123)
T 2lpm_A 39 ASRMQEALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIF-ATGYGSK 91 (123)
T ss_dssp SCCHHHHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCC-BCTTCTT
T ss_pred ECCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEE-EecCccH
Confidence 4566777776666789988999999953 23455666678899665 6788754
No 297
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=62.59 E-value=62 Score=26.93 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=46.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCC-CC--EEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY-PN--MIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~-~d--~VvIDFS~p~~~~~~~~~ 77 (213)
+|+.+++.+.+.|..|+.. ++.. +.+++..+++.... .. .+..|+|.++.+.+.++.
T Consensus 53 IG~aia~~la~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 112 (293)
T 3rih_A 53 IGRGIATVFARAGANVAVA-ARSP-------------------RELSSVTAELGELGAGNVIGVRLDVSDPGSCADAART 112 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSG-------------------GGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCH-------------------HHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH
Confidence 4888888888888887743 3322 12222222322212 12 256799999999999988
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.+||-..|.
T Consensus 113 ~~~~~g~iD~lvnnAg~ 129 (293)
T 3rih_A 113 VVDAFGALDVVCANAGI 129 (293)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 7664 78899988874
No 298
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=62.46 E-value=21 Score=26.98 Aligned_cols=82 Identities=13% Similarity=0.077 Sum_probs=42.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh-----------H
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP-----------A 69 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p-----------~ 69 (213)
+|+.+++.+.+.|.++++. ++.+...-... ..+..+...+..|.+.. .+.. ..+| ++|....+ .
T Consensus 15 iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~-~~~~~~~~~D~~~~~~~-~~~~-~~~d-~vi~~a~~~~~~~~~~~n~~ 89 (206)
T 1hdo_A 15 TGLTTLAQAVQAGYEVTVL-VRDSSRLPSEG-PRPAHVVVGDVLQAADV-DKTV-AGQD-AVIVLLGTRNDLSPTTVMSE 89 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCGGGSCSSS-CCCSEEEESCTTSHHHH-HHHH-TTCS-EEEECCCCTTCCSCCCHHHH
T ss_pred HHHHHHHHHHHCCCeEEEE-EeChhhccccc-CCceEEEEecCCCHHHH-HHHH-cCCC-EEEECccCCCCCCccchHHH
Confidence 4899999998889998864 33322110000 00111111112233332 2222 2577 77877543 2
Q ss_pred HHHHHHHHHHhcCCCEEE
Q 028115 70 AVNGNAELYSKVGVPFVM 87 (213)
Q Consensus 70 ~~~~~~~~~~~~g~~~Vi 87 (213)
.....++.|.+.+++-++
T Consensus 90 ~~~~~~~~~~~~~~~~~v 107 (206)
T 1hdo_A 90 GARNIVAAMKAHGVDKVV 107 (206)
T ss_dssp HHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHhCCCeEE
Confidence 466677777777775444
No 299
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=62.44 E-value=21 Score=30.31 Aligned_cols=23 Identities=22% Similarity=0.274 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHh-cCCC--EEEEcCC
Q 028115 69 AAVNGNAELYSK-VGVP--FVMGTTG 91 (213)
Q Consensus 69 ~~~~~~~~~~~~-~g~~--~ViGTTG 91 (213)
+++..++++.++ .|+. +|.||||
T Consensus 24 ~~l~~lv~~li~~~Gv~gl~~~GttG 49 (293)
T 1f6k_A 24 KGLRQIIRHNIDKMKVDGLYVGGSTG 49 (293)
T ss_dssp HHHHHHHHHHHHTSCCSEEEESSGGG
T ss_pred HHHHHHHHHHHhhCCCcEEEeCcccc
Confidence 344455555555 5543 2335555
No 300
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=62.23 E-value=18 Score=30.88 Aligned_cols=12 Identities=17% Similarity=0.266 Sum_probs=6.7
Q ss_pred CCCEEEEcCCCC
Q 028115 82 GVPFVMGTTGGD 93 (213)
Q Consensus 82 g~~~ViGTTG~~ 93 (213)
++|+++||.+.+
T Consensus 77 rvpviaGvg~~~ 88 (301)
T 3m5v_A 77 KVKVLAGAGSNA 88 (301)
T ss_dssp SCEEEEECCCSS
T ss_pred CCeEEEeCCCCC
Confidence 455666555554
No 301
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=62.21 E-value=10 Score=32.34 Aligned_cols=35 Identities=26% Similarity=0.355 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHhcCCC--EEEEcCC----CCHHHHHHHHH
Q 028115 68 PAAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHETIE 102 (213)
Q Consensus 68 p~~~~~~~~~~~~~g~~--~ViGTTG----~~~~~~~~~~~ 102 (213)
.+++..++++.++.|+. +|.|||| ++.+|..++.+
T Consensus 19 ~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~ 59 (288)
T 2nuw_A 19 VDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLN 59 (288)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH
Confidence 47788899999999986 4569999 56666555443
No 302
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=62.06 E-value=21 Score=28.33 Aligned_cols=62 Identities=24% Similarity=0.159 Sum_probs=34.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH--
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY-- 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~-- 78 (213)
||+.+++.+.+.|+++.. +++.+. .+ ..+| ++|=..-+..+.+.++..
T Consensus 30 mG~~la~~l~~~g~~V~~-~~~~~~-----------------------~~-----~~aD-~vi~av~~~~~~~v~~~l~~ 79 (209)
T 2raf_A 30 MGQAIGHNFEIAGHEVTY-YGSKDQ-----------------------AT-----TLGE-IVIMAVPYPALAALAKQYAT 79 (209)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECTTCC-----------------------CS-----SCCS-EEEECSCHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHCCCEEEE-EcCCHH-----------------------Hh-----ccCC-EEEEcCCcHHHHHHHHHHHH
Confidence 678888877777777653 333221 01 2456 555555565555555432
Q ss_pred -HhcCCCEEEEcCCCC
Q 028115 79 -SKVGVPFVMGTTGGD 93 (213)
Q Consensus 79 -~~~g~~~ViGTTG~~ 93 (213)
.+ +..+|.-++|++
T Consensus 80 ~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 80 QLK-GKIVVDITNPLN 94 (209)
T ss_dssp HHT-TSEEEECCCCBC
T ss_pred hcC-CCEEEEECCCCC
Confidence 33 555666667765
No 303
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=61.73 E-value=39 Score=23.75 Aligned_cols=53 Identities=13% Similarity=0.102 Sum_probs=30.0
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChH-HHHHHHHHHHhc--CCCEEEEcCCCCHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDRVR 96 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~~~ViGTTG~~~~~ 96 (213)
.+.++++..+....||.|++|+..|. .-.+.++...+. .+|+|+-|.-.+.+.
T Consensus 31 ~~~~~a~~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~ 86 (139)
T 2jk1_A 31 QGAEAAIAILEEEWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYTDSAS 86 (139)
T ss_dssp SSHHHHHHHHHHSCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESCTTCHH
T ss_pred CCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCCCChHH
Confidence 34455555444456888899999885 233445544443 456666544333333
No 304
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=61.70 E-value=15 Score=32.60 Aligned_cols=84 Identities=20% Similarity=0.235 Sum_probs=48.9
Q ss_pred ChHHHHHHHH-hCCCeEEEEec-CCC-c----------cccc----------cccccCceeEeecCCchhHHHhhhhcCC
Q 028115 1 MGKAVIKAAD-AAGLELVPVSF-GTE-E----------ESGQ----------KVEVCGKEIQVHGLSDRESVLASVFDKY 57 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~-~~~-~----------~~g~----------~~~~~~~~v~i~~~~~~~~~l~~~~~~~ 57 (213)
+|+.+.+++. .+++|||+..+ ... + .-|. .+.+.+..+.+....|+++.- ..+..
T Consensus 28 iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~i~--w~~~~ 105 (354)
T 3cps_A 28 IGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPAEIP--WGASG 105 (354)
T ss_dssp HHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCGGGCC--HHHHT
T ss_pred HHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCChHHCC--cccCC
Confidence 4899999987 57999999876 211 1 0010 011122234444333444310 00125
Q ss_pred CCEEEEEcCChHHHHHHHHHHHhcCCC-EEE
Q 028115 58 PNMIVVDYTVPAAVNGNAELYSKVGVP-FVM 87 (213)
Q Consensus 58 ~d~VvIDFS~p~~~~~~~~~~~~~g~~-~Vi 87 (213)
+| ++++-|-.....+..+..++.|.+ +||
T Consensus 106 vD-vV~eatg~~~s~e~a~~~l~~GakkvVI 135 (354)
T 3cps_A 106 AQ-IVCESTGVFTTEEKASLHLKGGAKKVII 135 (354)
T ss_dssp CC-EEEECSSSCCSHHHHGGGGTTTCSEEEE
T ss_pred CC-EEEECCCchhhHHHHHHHHHcCCcEEEE
Confidence 78 889877777777888888888874 444
No 305
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=61.69 E-value=23 Score=28.79 Aligned_cols=72 Identities=22% Similarity=0.160 Sum_probs=46.3
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..|+.. ++.. +.+++..+++...... .+..|.|.++.+.+.++.+
T Consensus 23 IG~aia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 23 LGTTLARRCAEQGADLVLA-ARTV-------------------ERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4888999888889887643 3322 1122222222212223 2456999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 83 ~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 83 MKAYGRVDVVINNAFR 98 (264)
T ss_dssp HHHTSCCSEEEECCCS
T ss_pred HHHcCCCcEEEECCCC
Confidence 775 68888877764
No 306
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=61.59 E-value=22 Score=28.85 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=46.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..|+.. ++... .+++..+++...... .+..|+|.++.+...++.+
T Consensus 19 IG~aia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 19 IGAEIAKKFAAEGFTVFAG-RRNGE-------------------KLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSGG-------------------GGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHH
Confidence 4889999988889887753 33321 222222222211222 2567999999999999888
Q ss_pred Hhc-CCCEEEEcCCC
Q 028115 79 SKV-GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~-g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 79 ~~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 79 DAHAPLEVTIFNVGA 93 (252)
T ss_dssp HHHSCEEEEEECCCC
T ss_pred HhhCCceEEEECCCc
Confidence 776 56788877774
No 307
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=61.25 E-value=23 Score=27.00 Aligned_cols=48 Identities=19% Similarity=0.238 Sum_probs=30.0
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChH-HHHHHHHHHHhc--CCCEEEEcCC
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTG 91 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~~~ViGTTG 91 (213)
.+.++++..+....||.|++|...|. .-.+.++...+. ++|+|+=|.-
T Consensus 35 ~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 85 (208)
T 1yio_A 35 DCASTFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAH 85 (208)
T ss_dssp SSHHHHHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESC
T ss_pred CCHHHHHHhhhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 45556665555556898899999985 234555555443 5777665443
No 308
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=61.24 E-value=24 Score=29.46 Aligned_cols=80 Identities=16% Similarity=0.104 Sum_probs=43.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCC-hHHHHHHHHHH-
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTV-PAAVNGNAELY- 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~-p~~~~~~~~~~- 78 (213)
||+.+++.+.+.|+++. ++++.+.... .+ ...++.+. .+.++++. .+| +||-.+. |..+.+.+...
T Consensus 41 mG~~~a~~l~~~g~~V~-~~~~~~~~~~-~~--~~~g~~~~--~~~~~~~~-----~~D-vVi~av~~~~~~~~v~~~~~ 108 (316)
T 2uyy_A 41 MGSGIVSNLLKMGHTVT-VWNRTAEKCD-LF--IQEGARLG--RTPAEVVS-----TCD-ITFACVSDPKAAKDLVLGPS 108 (316)
T ss_dssp HHHHHHHHHHHTTCCEE-EECSSGGGGH-HH--HHTTCEEC--SCHHHHHH-----HCS-EEEECCSSHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhCCCEEE-EEeCCHHHHH-HH--HHcCCEEc--CCHHHHHh-----cCC-EEEEeCCCHHHHHHHHcCch
Confidence 78999998887788865 4555432211 11 11123332 34555442 468 6666665 77777766532
Q ss_pred -----HhcCCCEEEEcCCC
Q 028115 79 -----SKVGVPFVMGTTGG 92 (213)
Q Consensus 79 -----~~~g~~~ViGTTG~ 92 (213)
.+.+..+|..+|+.
T Consensus 109 ~~~~~l~~~~~vv~~s~~~ 127 (316)
T 2uyy_A 109 GVLQGIRPGKCYVDMSTVD 127 (316)
T ss_dssp CGGGGCCTTCEEEECSCCC
T ss_pred hHhhcCCCCCEEEECCCCC
Confidence 23455555555544
No 309
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=61.24 E-value=17 Score=31.12 Aligned_cols=61 Identities=20% Similarity=0.103 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHhcCCC--EEEEcCC----CCHHHHHHHHHc------cCCcEEE---ccChhHHHHHHHHHHHH
Q 028115 67 VPAAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHETIEN------SNVYAVI---SPQMGKQVVAFLAAMEI 127 (213)
Q Consensus 67 ~p~~~~~~~~~~~~~g~~--~ViGTTG----~~~~~~~~~~~~------~~~~~v~---a~N~SlGv~ll~~l~~~ 127 (213)
..+++..++++.++.|+. +|.|||| ++.+|..++.+. .++|++. +.|+.--+.+.....+.
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~ 94 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQA 94 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhc
No 310
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=61.14 E-value=22 Score=28.67 Aligned_cols=83 Identities=16% Similarity=0.114 Sum_probs=52.7
Q ss_pred ChHHHHHHHHhCC----CeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHH
Q 028115 1 MGKAVIKAADAAG----LELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 1 MG~~i~~~~~~~~----~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (213)
||+.+++.+.+.| .++. .+++.+.. .++.+. .+.++++. .+| +||=...|..+.+.++
T Consensus 15 mG~~~a~~l~~~g~~~~~~v~-~~~~~~~~---------~g~~~~--~~~~~~~~-----~~D-~vi~~v~~~~~~~v~~ 76 (262)
T 2rcy_A 15 MGSALAHGIANANIIKKENLF-YYGPSKKN---------TTLNYM--SSNEELAR-----HCD-IIVCAVKPDIAGSVLN 76 (262)
T ss_dssp HHHHHHHHHHHHTSSCGGGEE-EECSSCCS---------SSSEEC--SCHHHHHH-----HCS-EEEECSCTTTHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCeEE-EEeCCccc---------CceEEe--CCHHHHHh-----cCC-EEEEEeCHHHHHHHHH
Confidence 7999998887666 4554 45554422 123332 34544442 478 7777777888888777
Q ss_pred HHHhc--CCCEEEEcCCCCHHHHHHHH
Q 028115 77 LYSKV--GVPFVMGTTGGDRVRLHETI 101 (213)
Q Consensus 77 ~~~~~--g~~~ViGTTG~~~~~~~~~~ 101 (213)
..... +..+|+-+.|.+.+.++++.
T Consensus 77 ~l~~~l~~~~vv~~~~gi~~~~l~~~~ 103 (262)
T 2rcy_A 77 NIKPYLSSKLLISICGGLNIGKLEEMV 103 (262)
T ss_dssp HSGGGCTTCEEEECCSSCCHHHHHHHH
T ss_pred HHHHhcCCCEEEEECCCCCHHHHHHHh
Confidence 65432 45688888999987766653
No 311
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=61.13 E-value=13 Score=25.34 Aligned_cols=47 Identities=17% Similarity=0.229 Sum_probs=27.8
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh--cCCCEEEEcC
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTT 90 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~~~ViGTT 90 (213)
.+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+-|.
T Consensus 32 ~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 81 (116)
T 3a10_A 32 ENGEEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTA 81 (116)
T ss_dssp SSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEEC
Confidence 344555555555678988999988852 2344444433 3467666544
No 312
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=60.81 E-value=32 Score=28.41 Aligned_cols=56 Identities=9% Similarity=-0.010 Sum_probs=38.5
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCC-EEEEcCCCCHHHHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRLHET 100 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~-~ViGTTG~~~~~~~~~ 100 (213)
.+....+..+....|| +|+=++.+..+...++.+.+.|+. .++|+.|+...++...
T Consensus 180 ~d~~~~~~~l~~~~~d-~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 236 (356)
T 3ipc_A 180 KDFSALISKMKEAGVS-IIYWGGLHTEAGLIIRQAADQGLKAKLVSGDGIVSNELASI 236 (356)
T ss_dssp CCCHHHHHHHHHTTCC-EEEEESCHHHHHHHHHHHHHHTCCCEEEECGGGCSHHHHHH
T ss_pred CCHHHHHHHHHhcCCC-EEEEccCchHHHHHHHHHHHCCCCCcEEEeccccCHHHHHH
Confidence 4566666666667899 566566666677889999888754 3577888775554443
No 313
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=60.81 E-value=39 Score=27.30 Aligned_cols=72 Identities=14% Similarity=0.112 Sum_probs=45.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+|+.. ++... .+++..+++...... .+..|+|.++.+...++.+
T Consensus 41 IG~~la~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 41 IGAAIARKLGSLGARVVLT-ARDVE-------------------KLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCHH-------------------HHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence 4888888888888887643 33221 112222222111222 3567999999999988877
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 101 ~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 654 68899988886
No 314
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=60.67 E-value=27 Score=29.13 Aligned_cols=71 Identities=11% Similarity=0.061 Sum_probs=47.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++...+.|..++. .++.. +.++++.+++.....+ .+..|.|.++.+...++.+
T Consensus 19 IG~aiA~~la~~Ga~Vv~-~~~~~-------------------~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 19 IGRAIAKKFALNDSIVVA-VELLE-------------------DRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp HHHHHHHHHHHTTCEEEE-EESCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEE-EECCH-------------------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 589999998889988764 34332 1223333333322333 2567999999999999998
Q ss_pred Hhc--CCCEEEEcCC
Q 028115 79 SKV--GVPFVMGTTG 91 (213)
Q Consensus 79 ~~~--g~~~ViGTTG 91 (213)
.+. ++.++|--.|
T Consensus 79 ~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 79 FETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCc
Confidence 874 5778885555
No 315
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=60.61 E-value=40 Score=23.66 Aligned_cols=59 Identities=19% Similarity=0.237 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCChHH-HHHHHHHHHh---cCCCEEEEcCCCC-HHHHHHHHHccCCcEEEccChhH
Q 028115 56 KYPNMIVVDYTVPAA-VNGNAELYSK---VGVPFVMGTTGGD-RVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 56 ~~~d~VvIDFS~p~~-~~~~~~~~~~---~g~~~ViGTTG~~-~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
..||.|++|...|.. -.+.++...+ ..+|+|+- |++. .+...+.. ..+.--++.=.|+.
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~l-t~~~~~~~~~~~~-~~ga~~~l~KP~~~ 114 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVAL-TAFADDSNIKECL-ESGMNGFLSKPIKR 114 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEE-ESCCSHHHHHHHH-HTTCSEEEESSCCH
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEE-ECCCCHHHHHHHH-HcCCCEEEeCCCCH
Confidence 468988999999852 2344554443 24666654 5554 44333333 34433333333544
No 316
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=60.61 E-value=16 Score=31.34 Aligned_cols=12 Identities=8% Similarity=0.111 Sum_probs=5.7
Q ss_pred CCCEEEEcCCCC
Q 028115 82 GVPFVMGTTGGD 93 (213)
Q Consensus 82 g~~~ViGTTG~~ 93 (213)
++|+|.||.+.+
T Consensus 83 r~pviaGvg~~~ 94 (307)
T 3s5o_A 83 NRLLLAGSGCES 94 (307)
T ss_dssp TSEEEEECCCSS
T ss_pred CCcEEEecCCCC
Confidence 345555544444
No 317
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=60.61 E-value=27 Score=28.24 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=46.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|..++.. ++.. +.+++..+++. .....+..|.+.++.+...++.+.+
T Consensus 20 IG~~ia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~ 78 (259)
T 4e6p_A 20 IGRAFAEAYVREGATVAIA-DIDI-------------------ERARQAAAEIG-PAAYAVQMDVTRQDSIDAAIAATVE 78 (259)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHhC-CCceEEEeeCCCHHHHHHHHHHHHH
Confidence 4889999888889887643 3221 11222222221 1122356799999999999988776
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+|+-..|.
T Consensus 79 ~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 79 HAGGLDILVNNAAL 92 (259)
T ss_dssp HSSSCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 5 78899988885
No 318
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=60.58 E-value=21 Score=31.28 Aligned_cols=80 Identities=30% Similarity=0.299 Sum_probs=47.5
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCC-----------ccccc----------cccccCceeEeecCCchhHHHhhhhcCCC
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTE-----------EESGQ----------KVEVCGKEIQVHGLSDRESVLASVFDKYP 58 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~-----------~~~g~----------~~~~~~~~v~i~~~~~~~~~l~~~~~~~~ 58 (213)
.|+.+.+++. .++++++++.+... ...|+ .+.+.|..+.+....|+++. . ..+...
T Consensus 12 iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~i-~-w~~~~v 89 (334)
T 3cmc_O 12 IGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPENL-A-WGEIGV 89 (334)
T ss_dssp HHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGGGC-C-TGGGTC
T ss_pred HHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCChhhc-C-cccCcc
Confidence 4899999987 67899998766311 11121 11123334555433344332 0 111257
Q ss_pred CEEEEEcCChHHHHHHHHHHHhcCC
Q 028115 59 NMIVVDYTVPAAVNGNAELYSKVGV 83 (213)
Q Consensus 59 d~VvIDFS~p~~~~~~~~~~~~~g~ 83 (213)
| ++++-|-.....+..+..++.|.
T Consensus 90 D-vV~~atg~~~s~e~a~~~l~~Ga 113 (334)
T 3cmc_O 90 D-IVVESTGRFTKREDAAKHLEAGA 113 (334)
T ss_dssp C-EEEECSSSCCBHHHHTHHHHTTC
T ss_pred C-EEEECCCchhhHHHHHHHHHCCC
Confidence 8 88887777777778888888887
No 319
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=60.55 E-value=28 Score=28.01 Aligned_cols=71 Identities=15% Similarity=0.263 Sum_probs=46.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.++|.+++.. ++... ..++..+.+.. ....+..|.|.++.+...++.+.+
T Consensus 21 IG~a~a~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (248)
T 3op4_A 21 IGKAIAELLAERGAKVIGT-ATSES-------------------GAQAISDYLGD-NGKGMALNVTNPESIEAVLKAITD 79 (248)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSHH-------------------HHHHHHHHHGG-GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHhcc-cceEEEEeCCCHHHHHHHHHHHHH
Confidence 4889999888889887753 32211 11222222111 122367899999999999988877
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+++-..|.
T Consensus 80 ~~g~iD~lv~nAg~ 93 (248)
T 3op4_A 80 EFGGVDILVNNAGI 93 (248)
T ss_dssp HHCCCSEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 5 78899988885
No 320
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=60.36 E-value=26 Score=27.87 Aligned_cols=72 Identities=17% Similarity=0.155 Sum_probs=44.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.++|.+|+.. ++... ..++..+++.....+ .+..|++.++.+.+.++.+
T Consensus 25 iG~~la~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 25 IGLACVTALAEAGARVIIA-DLDEA-------------------MATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 3888998888888887753 32211 111111222111222 3567999999999988876
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+|+-..|.
T Consensus 85 ~~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 85 HEQEGRVDILVACAGI 100 (260)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 653 68889877774
No 321
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=60.27 E-value=19 Score=30.62 Aligned_cols=48 Identities=6% Similarity=-0.007 Sum_probs=35.3
Q ss_pred ChHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHccCCcEEEccCh
Q 028115 67 VPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQM 114 (213)
Q Consensus 67 ~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~ 114 (213)
+|..+.+.++.+.+.++++|.--+.++..-.+.|++..+++++..-++
T Consensus 222 s~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l 269 (291)
T 1pq4_A 222 SAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAAEIGAGVELLDPL 269 (291)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHHHHHTCEEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCc
Confidence 367777888888888888888888887766677777777777665444
No 322
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=60.22 E-value=13 Score=29.51 Aligned_cols=71 Identities=23% Similarity=0.303 Sum_probs=37.1
Q ss_pred chhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh-cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 45 DRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK-VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 45 ~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~-~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+=|.--+.+...... ..+.--++.-.++.
T Consensus 37 ~~~~al~~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~~~~~~~~~~~~-~~Ga~~~l~Kp~~~ 109 (238)
T 2gwr_A 37 DGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGL-ESGADDYIMKPFKP 109 (238)
T ss_dssp CGGGHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEETTCCSCHHHHH-HTTCCEEEEESCCH
T ss_pred CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHH-HCCCCEEEeCCCCH
Confidence 44444444444579988999998852 3344444443 367877765544433332322 23433333334444
No 323
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=60.13 E-value=16 Score=29.38 Aligned_cols=71 Identities=18% Similarity=0.212 Sum_probs=47.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.++|..++.. ++.. +.+++..+++ ......+..|+|.++.+.+.++.+.+
T Consensus 21 IG~~~a~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (261)
T 3n74_A 21 FGEGMAKRFAKGGAKVVIV-DRDK-------------------AGAERVAGEI-GDAALAVAADISKEADVDAAVEAALS 79 (261)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCH-------------------HHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4889999988889887743 3322 1222222222 11222367899999999999988877
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+||-..|.
T Consensus 80 ~~g~id~li~~Ag~ 93 (261)
T 3n74_A 80 KFGKVDILVNNAGI 93 (261)
T ss_dssp HHSCCCEEEECCCC
T ss_pred hcCCCCEEEECCcc
Confidence 5 78899988774
No 324
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=60.08 E-value=21 Score=28.07 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=16.9
Q ss_pred CCCCEEEE-EcCChHHHHHHHHHHHhcCCCEEEE
Q 028115 56 KYPNMIVV-DYTVPAAVNGNAELYSKVGVPFVMG 88 (213)
Q Consensus 56 ~~~d~VvI-DFS~p~~~~~~~~~~~~~g~~~ViG 88 (213)
..+|.|+| ++...+.+.+.++.+.++|+++++.
T Consensus 76 ~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~ 109 (211)
T 3f4w_A 76 AGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVD 109 (211)
T ss_dssp TTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred cCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEE
Confidence 34563333 2322244566666666666666654
No 325
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=60.07 E-value=16 Score=32.53 Aligned_cols=84 Identities=18% Similarity=0.119 Sum_probs=47.9
Q ss_pred ChHHHHHHHH-hCCCeEEEEecC--CCc--------------cc------cccccccCceeEeecCCchhHHHhhhhcCC
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFG--TEE--------------ES------GQKVEVCGKEIQVHGLSDRESVLASVFDKY 57 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~--~~~--------------~~------g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~ 57 (213)
+||.+.+++. ++++|||+.-++ .++ .. +..+.+.|..+.+....|+++. . ..+..
T Consensus 22 IGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~Gk~i~v~~~~dp~~~-~-w~~~g 99 (345)
T 2b4r_O 22 IGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQI-P-WGKCQ 99 (345)
T ss_dssp HHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGGGC-C-HHHHT
T ss_pred HHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEcCCEEEECCEEEEEEEcCCcccC-c-ccccC
Confidence 4899999987 678999988661 111 00 1112223344555533233321 0 11125
Q ss_pred CCEEEEEcCChHHHHHHHHHHHhcCCC-EEE
Q 028115 58 PNMIVVDYTVPAAVNGNAELYSKVGVP-FVM 87 (213)
Q Consensus 58 ~d~VvIDFS~p~~~~~~~~~~~~~g~~-~Vi 87 (213)
.| ++++-|-.....+....+++.|.. +||
T Consensus 100 vD-iV~estG~f~s~e~a~~hl~aGakkVVI 129 (345)
T 2b4r_O 100 VD-VVCESTGVFLTKELASSHLKGGAKKVIM 129 (345)
T ss_dssp CS-EEEECSSSCCSHHHHTHHHHTTCSEEEE
T ss_pred CC-EEEECcCccccHhhHHHHHHCCCCEEEE
Confidence 78 788876656666677777777876 455
No 326
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=59.96 E-value=43 Score=26.97 Aligned_cols=88 Identities=10% Similarity=0.103 Sum_probs=48.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecC--CCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFG--TEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~--~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
||+.+++.+.+.|+++.. .++ .+... +.+ ...++. .+.++++. .+| +||=...|....+.+...
T Consensus 11 mG~~la~~l~~~g~~V~~-~~~~~~~~~~-~~~--~~~g~~----~~~~~~~~-----~aD-vvi~~v~~~~~~~~~~~~ 76 (264)
T 1i36_A 11 VAQTLASRLRSRGVEVVT-SLEGRSPSTI-ERA--RTVGVT----ETSEEDVY-----SCP-VVISAVTPGVALGAARRA 76 (264)
T ss_dssp HHHHHHHHHHHTTCEEEE-CCTTCCHHHH-HHH--HHHTCE----ECCHHHHH-----TSS-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEE-eCCccCHHHH-HHH--HHCCCc----CCHHHHHh-----cCC-EEEEECCCHHHHHHHHHH
Confidence 799999988888898876 444 21111 111 111222 23444332 578 677776666555556555
Q ss_pred HhcCCCEEEEcCCCCHHHHHHHHH
Q 028115 79 SKVGVPFVMGTTGGDRVRLHETIE 102 (213)
Q Consensus 79 ~~~g~~~ViGTTG~~~~~~~~~~~ 102 (213)
.+.-.++|+=+++.+....+.+.+
T Consensus 77 ~~~~~~~vi~~s~~~~~~~~~l~~ 100 (264)
T 1i36_A 77 GRHVRGIYVDINNISPETVRMASS 100 (264)
T ss_dssp HTTCCSEEEECSCCCHHHHHHHHH
T ss_pred HHhcCcEEEEccCCCHHHHHHHHH
Confidence 544333777777776554444444
No 327
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=59.91 E-value=66 Score=26.36 Aligned_cols=83 Identities=13% Similarity=0.125 Sum_probs=42.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccc---cccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh---HHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKV---EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP---AAVNGN 74 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~---~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p---~~~~~~ 74 (213)
.|+.+++.+.+.|.++.+. .+.+...-..+ .-.+..+...+..|.+.. .+.. ..+| +||....+ ......
T Consensus 23 iG~~l~~~L~~~g~~V~~l-~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l-~~a~-~~~d-~vi~~a~~~~~~~~~~l 98 (318)
T 2r6j_A 23 IGNHMVKGSLKLGHPTYVF-TRPNSSKTTLLDEFQSLGAIIVKGELDEHEKL-VELM-KKVD-VVISALAFPQILDQFKI 98 (318)
T ss_dssp THHHHHHHHHHTTCCEEEE-ECTTCSCHHHHHHHHHTTCEEEECCTTCHHHH-HHHH-TTCS-EEEECCCGGGSTTHHHH
T ss_pred HHHHHHHHHHHCCCcEEEE-ECCCCchhhHHHHhhcCCCEEEEecCCCHHHH-HHHH-cCCC-EEEECCchhhhHHHHHH
Confidence 4899999998888888764 33321000000 001111111122233332 2222 2567 67777654 345667
Q ss_pred HHHHHhcC-CCEEE
Q 028115 75 AELYSKVG-VPFVM 87 (213)
Q Consensus 75 ~~~~~~~g-~~~Vi 87 (213)
++.|.+.| ++-++
T Consensus 99 ~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 99 LEAIKVAGNIKRFL 112 (318)
T ss_dssp HHHHHHHCCCCEEE
T ss_pred HHHHHhcCCCCEEE
Confidence 77777777 66555
No 328
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=59.71 E-value=69 Score=26.22 Aligned_cols=72 Identities=13% Similarity=0.088 Sum_probs=46.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..++.. ++... ..++..+++...... .+..|.+.++.+...++.+
T Consensus 45 IG~aia~~la~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 45 IGAAIAEGLAGAGAHVILH-GVKPG-------------------STAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSTT-------------------TTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCHH-------------------HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 4889999988889887743 33221 112222222111222 3567999999999998887
Q ss_pred Hhc-CCCEEEEcCCC
Q 028115 79 SKV-GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~-g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 105 ~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 105 EAIAPVDILVINASA 119 (275)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 765 67888888884
No 329
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=59.62 E-value=66 Score=27.24 Aligned_cols=78 Identities=14% Similarity=0.093 Sum_probs=40.2
Q ss_pred hHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhc
Q 028115 2 GKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKV 81 (213)
Q Consensus 2 G~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~ 81 (213)
|++++.++.+.|++++.. +..+..+...+ +..-+.+...++.+..+.. ..++|.|+.-|..........+.+.+.
T Consensus 13 g~~~~~~Ak~~G~~vv~v-d~~~~~~~~~~--aD~~~~~~~~~d~~~~~~~--~~~~D~v~~~~~~~~~~~~~~~~~~~~ 87 (363)
T 4ffl_A 13 GFEAAYLSKKAGMKVVLV-DKNPQALIRNY--ADEFYCFDVIKEPEKLLEL--SKRVDAVLPVNENLACIEFLNSIKEKF 87 (363)
T ss_dssp HHHHHHHHHHTTCEEEEE-ESCTTCTTTTT--SSEEEECCTTTCHHHHHHH--HTSSSEEEECCCCHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHCCCEEEEE-eCCCCChhHhh--CCEEEECCCCcCHHHHHHH--hcCCCEEEECCCChhHHHHHHHHHHHC
Confidence 678888888999998864 65443332221 2222223223445544432 236774455555554444334444455
Q ss_pred CCC
Q 028115 82 GVP 84 (213)
Q Consensus 82 g~~ 84 (213)
++|
T Consensus 88 ~~~ 90 (363)
T 4ffl_A 88 SCP 90 (363)
T ss_dssp SSC
T ss_pred CCc
Confidence 554
No 330
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=59.48 E-value=65 Score=25.74 Aligned_cols=36 Identities=8% Similarity=0.143 Sum_probs=23.5
Q ss_pred hhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEE
Q 028115 53 VFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMG 88 (213)
Q Consensus 53 ~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViG 88 (213)
+....+|.++|--+.++...+.++.+.+.|+|+|+-
T Consensus 53 l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 88 (283)
T 2ioy_A 53 LIQQKVDVLLINPVDSDAVVTAIKEANSKNIPVITI 88 (283)
T ss_dssp HHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHcCCCEEEEeCCchhhhHHHHHHHHHCCCeEEEe
Confidence 334578854553334455556788888999998764
No 331
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=59.43 E-value=22 Score=29.21 Aligned_cols=35 Identities=9% Similarity=0.074 Sum_probs=26.9
Q ss_pred cCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEc
Q 028115 55 DKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGT 89 (213)
Q Consensus 55 ~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGT 89 (213)
...+|.++|--+.++...+.++.+.+.|+|+|.--
T Consensus 57 ~~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~ 91 (330)
T 3uug_A 57 TKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYD 91 (330)
T ss_dssp HHTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEES
T ss_pred HcCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEEC
Confidence 34789556655666778889999999999998743
No 332
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=59.21 E-value=62 Score=26.90 Aligned_cols=80 Identities=11% Similarity=-0.008 Sum_probs=42.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+.|+++.. +++.+..... + ...++.. ..++++++ . +|+|++=-..|..+.+.++...+
T Consensus 26 mG~~~A~~l~~~G~~V~~-~dr~~~~~~~-~--~~~g~~~--~~~~~~~~-----~-aDvvi~~vp~~~~~~~v~~~l~~ 93 (296)
T 3qha_A 26 MGAPMATRMTEWPGGVTV-YDIRIEAMTP-L--AEAGATL--ADSVADVA-----A-ADLIHITVLDDAQVREVVGELAG 93 (296)
T ss_dssp THHHHHHHHTTSTTCEEE-ECSSTTTSHH-H--HHTTCEE--CSSHHHHT-----T-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCeEEE-EeCCHHHHHH-H--HHCCCEE--cCCHHHHH-----h-CCEEEEECCChHHHHHHHHHHHH
Confidence 899999998888998764 4654432111 1 1112333 23555532 2 78434433445667766655544
Q ss_pred ---cCCCEEEEcCCC
Q 028115 81 ---VGVPFVMGTTGG 92 (213)
Q Consensus 81 ---~g~~~ViGTTG~ 92 (213)
.+.-+|..+|..
T Consensus 94 ~l~~g~ivv~~st~~ 108 (296)
T 3qha_A 94 HAKPGTVIAIHSTIS 108 (296)
T ss_dssp TCCTTCEEEECSCCC
T ss_pred hcCCCCEEEEeCCCC
Confidence 344444444443
No 333
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=59.10 E-value=29 Score=28.24 Aligned_cols=72 Identities=15% Similarity=0.075 Sum_probs=45.1
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+|+.. ++... .+++...++...... .+..|++.++.+...++.+
T Consensus 43 IG~~la~~L~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 43 IGRLTAYEFAKLKSKLVLW-DINKH-------------------GLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-EcCHH-------------------HHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHH
Confidence 3788888888788887643 32211 112212222111222 3567999999999988877
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 103 ~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 103 KAEIGDVSILVNNAGV 118 (272)
T ss_dssp HHHTCCCSEEEECCCC
T ss_pred HHHCCCCcEEEECCCc
Confidence 654 68899988885
No 334
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=59.04 E-value=15 Score=29.42 Aligned_cols=82 Identities=12% Similarity=0.066 Sum_probs=46.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+.|++++..+++.++...+...-.+ +.... ++.+. + ..+| +||=-+-|..+.+.++....
T Consensus 34 mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g--~~~~~-~~~~~-~-----~~aD-vVilavp~~~~~~v~~~l~~ 103 (220)
T 4huj_A 34 IGSALAERFTAAQIPAIIANSRGPASLSSVTDRFG--ASVKA-VELKD-A-----LQAD-VVILAVPYDSIADIVTQVSD 103 (220)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHT--TTEEE-CCHHH-H-----TTSS-EEEEESCGGGHHHHHTTCSC
T ss_pred HHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhC--CCccc-ChHHH-H-----hcCC-EEEEeCChHHHHHHHHHhhc
Confidence 78999999888899988756665432211111001 11111 22222 2 2578 67777777777777765422
Q ss_pred -cCCCEEEEcCCC
Q 028115 81 -VGVPFVMGTTGG 92 (213)
Q Consensus 81 -~g~~~ViGTTG~ 92 (213)
.+..+|.-+.|+
T Consensus 104 ~~~~ivi~~~~g~ 116 (220)
T 4huj_A 104 WGGQIVVDASNAI 116 (220)
T ss_dssp CTTCEEEECCCCB
T ss_pred cCCCEEEEcCCCC
Confidence 245566666677
No 335
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=58.86 E-value=60 Score=25.04 Aligned_cols=75 Identities=17% Similarity=0.192 Sum_probs=40.1
Q ss_pred eecCCchhHHHhhhhcC-------------CCCEEEEEcCChHH-HHHHHHHHHh------cCCCEEEEcCCC-CHHHHH
Q 028115 40 VHGLSDRESVLASVFDK-------------YPNMIVVDYTVPAA-VNGNAELYSK------VGVPFVMGTTGG-DRVRLH 98 (213)
Q Consensus 40 i~~~~~~~~~l~~~~~~-------------~~d~VvIDFS~p~~-~~~~~~~~~~------~g~~~ViGTTG~-~~~~~~ 98 (213)
+....+.+++++.+... .||.|++|+..|.. -.+.++...+ ..+|+|+-|.-- +.+...
T Consensus 89 v~~a~~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~ 168 (206)
T 3mm4_A 89 VEQCDSGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEAR 168 (206)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHH
T ss_pred eeeeCCHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHH
Confidence 33345667766655432 68988999998853 3344444443 457776655433 334443
Q ss_pred HHHHccCCcEEEccChh
Q 028115 99 ETIENSNVYAVISPQMG 115 (213)
Q Consensus 99 ~~~~~~~~~~v~a~N~S 115 (213)
+..+ .++--++.=.|+
T Consensus 169 ~~~~-~Ga~~~l~KP~~ 184 (206)
T 3mm4_A 169 ETIQ-AGMDAFLDKSLN 184 (206)
T ss_dssp HHHH-HTCSEEEETTCT
T ss_pred HHHh-CCCCEEEcCcHH
Confidence 3332 343333333455
No 336
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=58.74 E-value=31 Score=28.51 Aligned_cols=72 Identities=15% Similarity=0.140 Sum_probs=46.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..|+.. ++.. +.+++..+++...... .+..|.|.++.+...++.+
T Consensus 40 IG~aia~~la~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 40 IGRATALALAADGVTVGAL-GRTR-------------------TEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSH-------------------HHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4788888888888877643 3221 1222222232222223 2567999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 100 ~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 100 VLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 765 78899877774
No 337
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=58.74 E-value=29 Score=27.92 Aligned_cols=72 Identities=17% Similarity=0.175 Sum_probs=46.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+++.. ++.+. .+++..+++...... .+..|.+.++.+.+.++.+
T Consensus 14 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 73 (256)
T 1geg_A 14 IGKAIALRLVKDGFAVAIA-DYNDA-------------------TAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQA 73 (256)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4899999988889887753 33221 111111222111222 2457999999999998877
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+|+-..|.
T Consensus 74 ~~~~g~id~lv~nAg~ 89 (256)
T 1geg_A 74 RKTLGGFDVIVNNAGV 89 (256)
T ss_dssp HHHTTCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 664 68899988874
No 338
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=58.73 E-value=41 Score=27.49 Aligned_cols=72 Identities=13% Similarity=0.088 Sum_probs=46.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhh---cCCCCEEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVF---DKYPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~---~~~~d~VvIDFS~p~~~~~~~~~ 77 (213)
+|+++++.+.+.|..++.. ++... ..++...++. ......+..|.|.++.+...++.
T Consensus 39 IG~aia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 98 (277)
T 4fc7_A 39 IGFRIAEIFMRHGCHTVIA-SRSLP-------------------RVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQ 98 (277)
T ss_dssp HHHHHHHHHHTTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 4888999888888887743 32211 1111111111 11122255799999999999988
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.+||-..|.
T Consensus 99 ~~~~~g~id~lv~nAg~ 115 (277)
T 4fc7_A 99 ALKEFGRIDILINCAAG 115 (277)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCcC
Confidence 8775 78899988873
No 339
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=58.60 E-value=31 Score=27.24 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=44.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+++.. ++... .+++..+++.....+ .+..|++.++.+...++.+
T Consensus 23 iG~~la~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 82 (255)
T 1fmc_A 23 IGKEIAITFATAGASVVVS-DINAD-------------------AANHVVDEIQQLGGQAFACRCDITSEQELSALADFA 82 (255)
T ss_dssp HHHHHHHHHHTTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCHH-------------------HHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4888999888888887743 33221 111112222111223 2457999999999888876
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 83 ~~~~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 83 ISKLGKVDILVNNAGG 98 (255)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 553 78889887774
No 340
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=58.56 E-value=35 Score=27.21 Aligned_cols=71 Identities=13% Similarity=-0.015 Sum_probs=46.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+++++.+.+.|..++.. ++... .+++..+++. .....+..|+|.++.+...++.+.+
T Consensus 15 IG~a~a~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~ 73 (235)
T 3l6e_A 15 LGRALTIGLVERGHQVSMM-GRRYQ-------------------RLQQQELLLG-NAVIGIVADLAHHEDVDVAFAAAVE 73 (235)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHG-GGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCHH-------------------HHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHH
Confidence 4899999988889887743 33221 1122222211 1122367899999999999988776
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+++-..|.
T Consensus 74 ~~g~id~lvnnAg~ 87 (235)
T 3l6e_A 74 WGGLPELVLHCAGT 87 (235)
T ss_dssp HHCSCSEEEEECCC
T ss_pred hcCCCcEEEECCCC
Confidence 4 68899888885
No 341
>3ks9_A Mglur1, metabotropic glutamate receptor 1; glutamate receptors, dimerization, glutamic acid BIN structural genomics, structural genomics consortium; HET: Z99 NAG; 1.90A {Homo sapiens} SCOP: c.93.1.1 PDB: 1ewk_A* 1ewt_A* 1ewv_A 1isr_A* 1iss_A* 3lmk_A*
Probab=58.43 E-value=45 Score=29.92 Aligned_cols=49 Identities=18% Similarity=0.303 Sum_probs=36.8
Q ss_pred chhHHHhhhhcC--CCCEEEEEcCChHHHHHHHHHHHhcCCC---EEEEcCCCCH
Q 028115 45 DRESVLASVFDK--YPNMIVVDYTVPAAVNGNAELYSKVGVP---FVMGTTGGDR 94 (213)
Q Consensus 45 ~~~~~l~~~~~~--~~d~VvIDFS~p~~~~~~~~~~~~~g~~---~ViGTTG~~~ 94 (213)
|....+..+... .++ |+|-|..+..+...++.+.+.|+. ++|||.||+.
T Consensus 242 d~~~~l~~i~~~~~~a~-vii~~~~~~~~~~l~~~~~~~g~~~k~~~i~s~~w~~ 295 (496)
T 3ks9_A 242 SFDRLLRKLRERLPKAR-VVVCFCEGMTVRGLLSAMRRLGVVGEFSLIGSDGWAD 295 (496)
T ss_dssp HHHHHHHHHHTTTTTTC-EEEEECCHHHHHHHHHHHHHHTCCSCCEEEECTTTTT
T ss_pred HHHHHHHHHHhccCceE-EEEEecChHHHHHHHHHHHHhCCCCcEEEEEechhcc
Confidence 445555555543 445 788898888888899999998876 5799999964
No 342
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=58.42 E-value=15 Score=31.05 Aligned_cols=21 Identities=29% Similarity=0.120 Sum_probs=12.1
Q ss_pred hHHHHHHHHhCCCeEEEEecC
Q 028115 2 GKAVIKAADAAGLELVPVSFG 22 (213)
Q Consensus 2 G~~i~~~~~~~~~elv~~~~~ 22 (213)
|...++.+...|...+.+++.
T Consensus 173 G~~aiq~ak~~G~~~vi~~~~ 193 (346)
T 4a2c_A 173 GLLAIQCAVALGAKSVTAIDI 193 (346)
T ss_dssp HHHHHHHHHHTTCSEEEEEES
T ss_pred chHHHHHHHHcCCcEEEEEec
Confidence 556666666666655444443
No 343
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=58.41 E-value=68 Score=26.07 Aligned_cols=85 Identities=16% Similarity=0.067 Sum_probs=49.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++.. ++..... ..+. ..-...+.+++..+.+...... .+..|.|.++.+.+.++.+
T Consensus 27 IG~a~a~~la~~G~~V~~~-~r~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 99 (280)
T 3pgx_A 27 QGRSHAVRLAAEGADIIAC-DICAPVS-ASVT-----YAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADG 99 (280)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECCSCCC-TTCC-----SCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ecccccc-cccc-----ccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4899999988889988753 3211000 0000 0000011223322222222233 2457999999999999887
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 100 ~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 100 MEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHCCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 765 78899988885
No 344
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=58.31 E-value=56 Score=27.48 Aligned_cols=72 Identities=11% Similarity=0.079 Sum_probs=47.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCC----CCEEEEEcCChHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY----PNMIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~----~d~VvIDFS~p~~~~~~~~ 76 (213)
+|+.+++.+.++|..|+.. ++... .+++..+++.... ...+..|.|.++.+...++
T Consensus 20 IG~~la~~l~~~G~~Vv~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 79 (319)
T 3ioy_A 20 VGIGLVRQLLNQGCKVAIA-DIRQD-------------------SIDKALATLEAEGSGPEVMGVQLDVASREGFKMAAD 79 (319)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCHH-------------------HHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHH
Confidence 4889999988889887753 33221 1122222211111 1235679999999999999
Q ss_pred HHHhc--CCCEEEEcCCC
Q 028115 77 LYSKV--GVPFVMGTTGG 92 (213)
Q Consensus 77 ~~~~~--g~~~ViGTTG~ 92 (213)
.+.+. ++.+|+-+.|.
T Consensus 80 ~~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 80 EVEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHHTCCEEEEEECCCC
T ss_pred HHHHhCCCCCEEEECCCc
Confidence 88775 67899988885
No 345
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=58.09 E-value=26 Score=28.80 Aligned_cols=72 Identities=18% Similarity=0.157 Sum_probs=46.3
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcC--CCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK--YPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~--~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..|+.. ++... .+++..+++... ....+..|.|.++.+...++.+
T Consensus 40 IG~aia~~la~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (270)
T 3ftp_A 40 IGRAIALELARRGAMVIGT-ATTEA-------------------GAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVEST 99 (270)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSHH-------------------HHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 4888998888888887643 32211 111111111111 2223678999999999999887
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 100 ~~~~g~iD~lvnnAg~ 115 (270)
T 3ftp_A 100 LKEFGALNVLVNNAGI 115 (270)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 765 78899988874
No 346
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=58.09 E-value=48 Score=23.67 Aligned_cols=59 Identities=20% Similarity=0.251 Sum_probs=36.4
Q ss_pred CchhHHHhhhhc-------CCCCEEEEEcCChHH-HHHHHHHHHhc----CCCEEEEcCCCCHHHHHHHHH
Q 028115 44 SDRESVLASVFD-------KYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGDRVRLHETIE 102 (213)
Q Consensus 44 ~~~~~~l~~~~~-------~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~~~ViGTTG~~~~~~~~~~~ 102 (213)
.+.++++..+.. ..||.|++|...|.. -.+.++...+. .+|+|+-|+..+.+...+..+
T Consensus 41 ~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~ 111 (149)
T 1i3c_A 41 RDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYE 111 (149)
T ss_dssp CSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHH
Confidence 455565655432 368988999999852 34555555553 578888777666655444433
No 347
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=57.96 E-value=29 Score=28.20 Aligned_cols=73 Identities=15% Similarity=0.231 Sum_probs=47.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCC-C--EEEEEcCCh-HHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYP-N--MIVVDYTVP-AAVNGNAE 76 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~-d--~VvIDFS~p-~~~~~~~~ 76 (213)
+|+++++.+.+.|..|+.. ++.. ...++.++++..... . .+..|.|.+ +.+...++
T Consensus 24 IG~~~a~~L~~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~ 83 (311)
T 3o26_A 24 IGFEICKQLSSNGIMVVLT-CRDV-------------------TKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLAD 83 (311)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHH
Confidence 4888898888888887653 2221 112222233222221 2 356799999 88888888
Q ss_pred HHHhc--CCCEEEEcCCCC
Q 028115 77 LYSKV--GVPFVMGTTGGD 93 (213)
Q Consensus 77 ~~~~~--g~~~ViGTTG~~ 93 (213)
...+. ++.+||-..|..
T Consensus 84 ~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 84 FIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHSSCCEEEECCCCC
T ss_pred HHHHhCCCCCEEEECCccc
Confidence 77765 799999998863
No 348
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=57.94 E-value=70 Score=25.48 Aligned_cols=38 Identities=13% Similarity=0.152 Sum_probs=24.0
Q ss_pred hhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEE
Q 028115 51 ASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMG 88 (213)
Q Consensus 51 ~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViG 88 (213)
+.+....+|.+++--+.++...+.++.+.+.++|+|.-
T Consensus 52 ~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~ 89 (290)
T 2fn9_A 52 DAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCV 89 (290)
T ss_dssp HHHHHTTCSEEEECCSCTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEE
Confidence 33334578844444344454556778888899998864
No 349
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=57.79 E-value=36 Score=28.72 Aligned_cols=57 Identities=12% Similarity=0.029 Sum_probs=41.2
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCC---EEEEcCCCCHHHHHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP---FVMGTTGGDRVRLHETI 101 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~---~ViGTTG~~~~~~~~~~ 101 (213)
.|....+.++....|| +|+=++.+..+...++.+.+.|++ .|+|.++++.+.++.+.
T Consensus 186 ~d~~~~~~~i~~~~~d-~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~ 245 (387)
T 3i45_A 186 LDAGPTVQALQQAEPE-GLFNVLFGADLPKFVREGRVRGLFAGRQVVSMLTGEPEYLNPLK 245 (387)
T ss_dssp CCHHHHHHHHHHTCCS-EEEECCCTTHHHHHHHHHHHHTSSTTCEEEEEEEESHHHHGGGG
T ss_pred cCHHHHHHHHHhCCCC-EEEEcCccHHHHHHHHHHHHcCCCCCCeEEeecCCChHHHHHhh
Confidence 4666677777777899 677677777788899999998873 56777666666555554
No 350
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=57.64 E-value=21 Score=32.45 Aligned_cols=109 Identities=12% Similarity=0.037 Sum_probs=57.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccc-c--------cc--------CceeEeecCCchhHHHhhhhcCCCCEEEE
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKV-E--------VC--------GKEIQVHGLSDRESVLASVFDKYPNMIVV 63 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~-~--------~~--------~~~v~i~~~~~~~~~l~~~~~~~~d~VvI 63 (213)
||..++..+.+.|+++++ ++..+..+.... + +. ...+.. +.|++++++ .+|+|+|
T Consensus 19 vG~~~A~~La~~G~~V~~-~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~--ttd~~ea~~-----~aDvvii 90 (446)
T 4a7p_A 19 VGLVSGACFSDFGHEVVC-VDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF--TTDLAEGVK-----DADAVFI 90 (446)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE--ESCHHHHHT-----TCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE--ECCHHHHHh-----cCCEEEE
Confidence 788888888888999885 564432211000 0 00 011233 346655442 5785555
Q ss_pred EcCChH----------HHHHHHHHHHh---cCCCEEEEcCCCCH---HHHHHH-HHc---cCCcEEEccChhHHH
Q 028115 64 DYTVPA----------AVNGNAELYSK---VGVPFVMGTTGGDR---VRLHET-IEN---SNVYAVISPQMGKQV 118 (213)
Q Consensus 64 DFS~p~----------~~~~~~~~~~~---~g~~~ViGTTG~~~---~~~~~~-~~~---~~~~~v~a~N~SlGv 118 (213)
--.+|. .+.+.++...+ .+..+|. .++... +++.+. .+. ...+++.+|+|.-=.
T Consensus 91 ~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~-~STv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~a~eG 164 (446)
T 4a7p_A 91 AVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVT-KSTVPVGTGDEVERIIAEVAPNSGAKVVSNPEFLREG 164 (446)
T ss_dssp CCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEE-CSCCCTTHHHHHHHHHHHHSTTSCCEEEECCCCCCTT
T ss_pred EcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEE-eCCCCchHHHHHHHHHHHhCCCCCceEEeCccccccc
Confidence 554553 46665555443 3444444 445542 344333 332 237899999876433
No 351
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=57.62 E-value=25 Score=28.49 Aligned_cols=72 Identities=17% Similarity=0.154 Sum_probs=46.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++.. ++... ..++..+++...... .+..|.|.++.+...++.+
T Consensus 24 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 24 IGRAIAGTFAKAGASVVVT-DLKSE-------------------GAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAA 83 (256)
T ss_dssp HHHHHHHHHHHHTCEEEEE-ESSHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4888888888888887643 32211 112222222212233 2567999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+++-..|.
T Consensus 84 ~~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 84 LDQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 775 78899988775
No 352
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=57.50 E-value=45 Score=23.20 Aligned_cols=71 Identities=14% Similarity=0.158 Sum_probs=35.2
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh---c---CCCEEEEcCCCCHH-HHHHHHHccCCcEEEccChh
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK---V---GVPFVMGTTGGDRV-RLHETIENSNVYAVISPQMG 115 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~---~---g~~~ViGTTG~~~~-~~~~~~~~~~~~~v~a~N~S 115 (213)
.+.++++..+.. .+|.|++|...|.. -.+.++...+ . ..|.|+-.|+.... ...... ..+.--++.-.++
T Consensus 38 ~~~~~a~~~~~~-~~dlvllD~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~~~~-~~ga~~~l~KP~~ 115 (136)
T 1dcf_A 38 SSNEECLRVVSH-EHKVVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCM-SFGLDGVLLKPVS 115 (136)
T ss_dssp SSHHHHHHHCCT-TCSEEEEECCSSTTTTTHHHHHHHHHHC-CCSCCCEEEEEESCCSHHHHHHHH-HTTCCEEEESSCC
T ss_pred CCHHHHHHHHhc-cCCEEEEeCCCCCCcHHHHHHHHHHhhhhccCCCceEEEEeCCCCHHHHHHHH-HcCCCeEEECCCC
Confidence 455666654433 34888999998852 1233333321 1 45655555666543 333332 3453333333455
Q ss_pred H
Q 028115 116 K 116 (213)
Q Consensus 116 l 116 (213)
.
T Consensus 116 ~ 116 (136)
T 1dcf_A 116 L 116 (136)
T ss_dssp H
T ss_pred H
Confidence 4
No 353
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=57.49 E-value=34 Score=27.77 Aligned_cols=73 Identities=14% Similarity=0.184 Sum_probs=45.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++.......+ ..+...+.+...... .+-.|++.++.+.+.++.+
T Consensus 41 IG~~la~~l~~~G~~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 41 IGAEIAKTLASMGLKVWINYRSNAE-------------------VADALKNELEEKGYKAAVIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHH-------------------HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 4888888888888887753221110 011111111111223 3567999999999999887
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 102 ~~~~g~id~li~nAg~ 117 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGV 117 (271)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 765 78899988885
No 354
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=57.42 E-value=36 Score=27.51 Aligned_cols=72 Identities=24% Similarity=0.201 Sum_probs=45.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++.. ++... .+++..+++...... .+..|+|.++.+...++.+
T Consensus 19 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (262)
T 1zem_A 19 IGLATALRLAEEGTAIALL-DMNRE-------------------ALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSV 78 (262)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4889999988889887643 33221 112222222111223 2456999999999988887
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 79 ~~~~g~id~lv~nAg~ 94 (262)
T 1zem_A 79 VRDFGKIDFLFNNAGY 94 (262)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 664 78899887774
No 355
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=57.41 E-value=28 Score=30.56 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=15.4
Q ss_pred HHHHHHHHhcCCCEEEEcCCCCHH
Q 028115 72 NGNAELYSKVGVPFVMGTTGGDRV 95 (213)
Q Consensus 72 ~~~~~~~~~~g~~~ViGTTG~~~~ 95 (213)
.+.++.+.+.++|+|+||.+.+.+
T Consensus 82 ~~vi~~~~~grvpViaGvg~~st~ 105 (344)
T 2hmc_A 82 MEGVERLVKAGIPVIVGTGAVNTA 105 (344)
T ss_dssp HHHHHHHHHTTCCEEEECCCSSHH
T ss_pred HHHHHHHhCCCCcEEEecCCCCHH
Confidence 345555555668888888777643
No 356
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=57.22 E-value=31 Score=27.79 Aligned_cols=75 Identities=9% Similarity=0.050 Sum_probs=46.3
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|.+|+.. ++..... ...++...+........+..|+|.++.+.+.++.+.+
T Consensus 21 IG~~ia~~l~~~G~~V~~~-~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 21 IAWGIARSLHEAGARLIFT-YAGERLE----------------KSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSGGGH----------------HHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEe-cCchHHH----------------HHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 4888999988889887743 3221100 0111111111000223367899999999999998877
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+|+-..|+
T Consensus 84 ~~g~id~li~~Ag~ 97 (266)
T 3oig_A 84 QVGVIHGIAHCIAF 97 (266)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCeeEEEEcccc
Confidence 5 67888887774
No 357
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=57.18 E-value=16 Score=31.29 Aligned_cols=23 Identities=22% Similarity=0.316 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
+++..++++.++.|+. +|.||||
T Consensus 25 ~~l~~lv~~li~~Gv~gl~v~GttG 49 (300)
T 3eb2_A 25 DVMGRLCDDLIQAGVHGLTPLGSTG 49 (300)
T ss_dssp HHHHHHHHHHHHTTCSCBBTTSGGG
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc
Confidence 4555666666666654 3456666
No 358
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=57.02 E-value=37 Score=29.43 Aligned_cols=50 Identities=10% Similarity=0.177 Sum_probs=37.1
Q ss_pred EEEEc--CChHHHHHHHHHHHhcCCC-EEEEcCCCC--HHHH----HHHHHccCCcEEE
Q 028115 61 IVVDY--TVPAAVNGNAELYSKVGVP-FVMGTTGGD--RVRL----HETIENSNVYAVI 110 (213)
Q Consensus 61 VvIDF--S~p~~~~~~~~~~~~~g~~-~ViGTTG~~--~~~~----~~~~~~~~~~~v~ 110 (213)
++||= ..++.+.+.++.+.+.|.. +.|||||.+ .+.+ +++++...+|+++
T Consensus 43 ~liDPdK~~~~~~~~~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~~~lPvil 101 (286)
T 3vk5_A 43 HIIDPFKVPVTEAVEKAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAATPLPVVL 101 (286)
T ss_dssp EEECTTTSCHHHHHHHHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHHCSSCEEE
T ss_pred EEECCCCCCcHHHHHHHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHhCCCCEEE
Confidence 67775 4567777788888888876 778999998 6543 4455556799988
No 359
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=56.96 E-value=32 Score=27.56 Aligned_cols=72 Identities=14% Similarity=0.173 Sum_probs=45.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++.. ++... .+++..+++.....+ .+..|+|.++.+...++.+
T Consensus 19 IG~aia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 78 (247)
T 2jah_A 19 IGEATARALAAEGAAVAIA-ARRVE-------------------KLRALGDELTAAGAKVHVLELDVADRQGVDAAVAST 78 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCHH-------------------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4889999888889887643 33221 112222222111223 2457999999999998877
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 79 ~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 79 VEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 664 78899988774
No 360
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=56.84 E-value=23 Score=30.93 Aligned_cols=80 Identities=18% Similarity=0.147 Sum_probs=50.4
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCcccccccc-----ccC-ceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHH
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVE-----VCG-KEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNG 73 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~g~~~~-----~~~-~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~ 73 (213)
+|+.+++.+. .++++|++..+.. ..|+.+. +.+ ..+.+. +++ ++ ..+| +++.-+-.....+
T Consensus 16 iG~~llr~L~~~p~~elv~v~s~~--~~g~~~~~~~~~~~g~~~~~~~---~~~----~~--~~vD-vV~~a~g~~~s~~ 83 (345)
T 2ozp_A 16 AGGEFLRLALSHPYLEVKQVTSRR--FAGEPVHFVHPNLRGRTNLKFV---PPE----KL--EPAD-ILVLALPHGVFAR 83 (345)
T ss_dssp HHHHHHHHHHTCTTEEEEEEBCST--TTTSBGGGTCGGGTTTCCCBCB---CGG----GC--CCCS-EEEECCCTTHHHH
T ss_pred HHHHHHHHHHcCCCcEEEEEECch--hhCchhHHhCchhcCccccccc---chh----Hh--cCCC-EEEEcCCcHHHHH
Confidence 4899999887 6788999776532 2333331 212 112221 222 12 3678 7777666677889
Q ss_pred HHHHHHhcCCCEEEEcCCC
Q 028115 74 NAELYSKVGVPFVMGTTGG 92 (213)
Q Consensus 74 ~~~~~~~~g~~~ViGTTG~ 92 (213)
.++.+.+.|+.+|.-+.-|
T Consensus 84 ~a~~~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 84 EFDRYSALAPVLVDLSADF 102 (345)
T ss_dssp THHHHHTTCSEEEECSSTT
T ss_pred HHHHHHHCCCEEEEcCccc
Confidence 9999999999877665544
No 361
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=56.82 E-value=76 Score=26.67 Aligned_cols=59 Identities=10% Similarity=0.136 Sum_probs=37.4
Q ss_pred CchhHHHhhhhcCCCCEEEEEcC-ChHHHHHHHHHHHhcCC-----CEEEEcCCCCHHHHHHHHHc
Q 028115 44 SDRESVLASVFDKYPNMIVVDYT-VPAAVNGNAELYSKVGV-----PFVMGTTGGDRVRLHETIEN 103 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS-~p~~~~~~~~~~~~~g~-----~~ViGTTG~~~~~~~~~~~~ 103 (213)
.|+...+.++...+|| +|+=|. ........++.+.+.|. +++.+..+++...+..+.+.
T Consensus 181 ~d~~~~l~~i~~~~pd-~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (371)
T 4f06_A 181 TDFGPIMQRIKNSGAD-MIFTFLPAGPPTLGFVKAYIDNGLKAGGVKLMSTGDVVTEPDLPNIGEA 245 (371)
T ss_dssp CCCHHHHHHHHHHTCS-EEEEECCTTHHHHHHHHHHHHTTTTTTTCEEEEEGGGGCGGGHHHHCGG
T ss_pred ccHHHHHHHHHhcCCC-EEEEEeccCchhhHHHHHHHHhhhhccCcEEEEecccCCHHHHHhcccc
Confidence 4667777777777899 555444 44556667777777665 35555555666666665443
No 362
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=56.81 E-value=52 Score=27.05 Aligned_cols=73 Identities=16% Similarity=0.174 Sum_probs=45.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcC-CCC--EEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK-YPN--MIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~-~~d--~VvIDFS~p~~~~~~~~~ 77 (213)
+|+.+++.+.+.|..++.. ++... +.+++..+++... ... .+..|.|.++.+...++.
T Consensus 37 IG~~ia~~la~~G~~V~~~-~r~~~------------------~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 97 (281)
T 3v2h_A 37 IGLAIARTLAKAGANIVLN-GFGAP------------------DEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM 97 (281)
T ss_dssp HHHHHHHHHHHTTCEEEEE-CCCCH------------------HHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCCh------------------HHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH
Confidence 4788888888888887643 22110 1112222222111 122 234699999999999988
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.+||-..|.
T Consensus 98 ~~~~~g~iD~lv~nAg~ 114 (281)
T 3v2h_A 98 VADRFGGADILVNNAGV 114 (281)
T ss_dssp HHHHTSSCSEEEECCCC
T ss_pred HHHHCCCCCEEEECCCC
Confidence 8775 78899988885
No 363
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=56.76 E-value=10 Score=32.28 Aligned_cols=32 Identities=31% Similarity=0.371 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHhcCCC--EEEEcCC----CCHHHHHH
Q 028115 68 PAAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHE 99 (213)
Q Consensus 68 p~~~~~~~~~~~~~g~~--~ViGTTG----~~~~~~~~ 99 (213)
.+++..++++.++.|+. +|.|||| ++.+|..+
T Consensus 18 ~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~ 55 (286)
T 2r91_A 18 PELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKME 55 (286)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHH
Confidence 35677777777777775 3457887 45554433
No 364
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=56.75 E-value=11 Score=32.22 Aligned_cols=33 Identities=30% Similarity=0.302 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHhcCCC--EEEEcCC----CCHHHHHHH
Q 028115 68 PAAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHET 100 (213)
Q Consensus 68 p~~~~~~~~~~~~~g~~--~ViGTTG----~~~~~~~~~ 100 (213)
.+++..++++.++.|+. +|.|||| ++.+|..++
T Consensus 19 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v 57 (293)
T 1w3i_A 19 KEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLEN 57 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHH
Confidence 46677777777888776 4558888 455554443
No 365
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=56.64 E-value=23 Score=29.59 Aligned_cols=72 Identities=15% Similarity=0.090 Sum_probs=48.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..|+. .++.. +.++++.+++.....+ .+..|.|.++.+...++.+
T Consensus 21 IG~aia~~la~~Ga~Vvi-~~~~~-------------------~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 80 (255)
T 4g81_D 21 LGFAYAEGLAAAGARVIL-NDIRA-------------------TLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKL 80 (255)
T ss_dssp HHHHHHHHHHHTTCEEEE-CCSCH-------------------HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-EECCH-------------------HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence 589999999899998774 23221 1223333333333334 2456999999999999999
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|--.|.
T Consensus 81 ~~~~G~iDiLVNNAG~ 96 (255)
T 4g81_D 81 DAEGIHVDILINNAGI 96 (255)
T ss_dssp HHTTCCCCEEEECCCC
T ss_pred HHHCCCCcEEEECCCC
Confidence 885 57888877774
No 366
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=56.56 E-value=63 Score=27.28 Aligned_cols=91 Identities=10% Similarity=0.071 Sum_probs=53.3
Q ss_pred ChHHHHHHHHhCC----CeEEEEecCCCc-cccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHH
Q 028115 1 MGKAVIKAADAAG----LELVPVSFGTEE-ESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA 75 (213)
Q Consensus 1 MG~~i~~~~~~~~----~elv~~~~~~~~-~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~ 75 (213)
||..++..+.+.| .++. ++++.+. ..-+.+ ...|+.+. .+..+++. .+| +||=...|..+.+.+
T Consensus 33 mG~ala~~L~~~G~~~~~~V~-v~~r~~~~~~~~~l--~~~G~~~~--~~~~e~~~-----~aD-vVilav~~~~~~~vl 101 (322)
T 2izz_A 33 LAFALAKGFTAAGVLAAHKIM-ASSPDMDLATVSAL--RKMGVKLT--PHNKETVQ-----HSD-VLFLAVKPHIIPFIL 101 (322)
T ss_dssp HHHHHHHHHHHTTSSCGGGEE-EECSCTTSHHHHHH--HHHTCEEE--SCHHHHHH-----HCS-EEEECSCGGGHHHHH
T ss_pred HHHHHHHHHHHCCCCCcceEE-EECCCccHHHHHHH--HHcCCEEe--CChHHHhc-----cCC-EEEEEeCHHHHHHHH
Confidence 7999999887777 5665 3455432 000111 11134442 24444332 478 777777788888888
Q ss_pred HHHHhc---CCCEEEEcCCCCHHHHHHHHH
Q 028115 76 ELYSKV---GVPFVMGTTGGDRVRLHETIE 102 (213)
Q Consensus 76 ~~~~~~---g~~~ViGTTG~~~~~~~~~~~ 102 (213)
+..... +..+|.-++|++.+.++++..
T Consensus 102 ~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~ 131 (322)
T 2izz_A 102 DEIGADIEDRHIVVSCAAGVTISSIEKKLS 131 (322)
T ss_dssp HHHGGGCCTTCEEEECCTTCCHHHHHHHHH
T ss_pred HHHHhhcCCCCEEEEeCCCCCHHHHHHHHh
Confidence 765442 444555567998777665543
No 367
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=56.54 E-value=11 Score=32.18 Aligned_cols=23 Identities=30% Similarity=0.346 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHhcCCC--EEEEcCC
Q 028115 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~~--~ViGTTG 91 (213)
+++..++++.++.|+. +|.||||
T Consensus 24 ~~l~~lv~~li~~Gv~gl~~~GttG 48 (294)
T 3b4u_A 24 DAMIAHARRCLSNGCDSVTLFGTTG 48 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTT
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc
Confidence 4455555555555554 2345555
No 368
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=56.52 E-value=33 Score=28.09 Aligned_cols=72 Identities=13% Similarity=0.130 Sum_probs=45.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+|+.. ++.+. .+++..+++.....+ .+..|++.++.+...++.+
T Consensus 34 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 93 (277)
T 2rhc_B 34 IGLEIARRLGKEGLRVFVC-ARGEE-------------------GLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAV 93 (277)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 4888998888888887753 33221 112222222111222 2567999999999988877
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 94 ~~~~g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 94 VERYGPVDVLVNNAGR 109 (277)
T ss_dssp HHHTCSCSEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 654 58899887774
No 369
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=56.34 E-value=43 Score=26.47 Aligned_cols=72 Identities=11% Similarity=0.172 Sum_probs=45.5
Q ss_pred ChHHHHHHHHh-CCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcC--CCCEEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADA-AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK--YPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~-~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~--~~d~VvIDFS~p~~~~~~~~~ 77 (213)
+|+.+++.+.+ .|.+++.. ++... ..++..+++... ....+..|++.++.+...++.
T Consensus 16 IG~~~a~~L~~~~g~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 75 (276)
T 1wma_A 16 IGLAIVRDLCRLFSGDVVLT-ARDVT-------------------RGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF 75 (276)
T ss_dssp HHHHHHHHHHHHSSSEEEEE-ESSHH-------------------HHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEE-eCChH-------------------HHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHH
Confidence 48899999887 89887753 32211 111112222111 223357899999999988887
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.+||-..|.
T Consensus 76 ~~~~~g~id~li~~Ag~ 92 (276)
T 1wma_A 76 LRKEYGGLDVLVNNAGI 92 (276)
T ss_dssp HHHHHSSEEEEEECCCC
T ss_pred HHHhcCCCCEEEECCcc
Confidence 7664 67888877774
No 370
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=56.32 E-value=80 Score=25.67 Aligned_cols=70 Identities=13% Similarity=0.130 Sum_probs=45.1
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcC--CCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK--YPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~--~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..|+.. ++.. .++.++++... ....+..|+|.++.+.+.++.+
T Consensus 40 IG~~ia~~l~~~G~~V~~~-~r~~---------------------~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 97 (280)
T 3nrc_A 40 IAYGIAKAMHREGAELAFT-YVGQ---------------------FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVEL 97 (280)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECTT---------------------CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEe-eCch---------------------HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHH
Confidence 4788888888888887643 2221 01111222111 1223678999999999999988
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|+
T Consensus 98 ~~~~g~id~li~nAg~ 113 (280)
T 3nrc_A 98 GKVWDGLDAIVHSIAF 113 (280)
T ss_dssp HHHCSSCCEEEECCCC
T ss_pred HHHcCCCCEEEECCcc
Confidence 764 68899988774
No 371
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=56.28 E-value=34 Score=27.22 Aligned_cols=72 Identities=18% Similarity=0.174 Sum_probs=45.3
Q ss_pred ChHHHHHHHHhCCCeEEEEecC-CCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFG-TEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~-~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~ 77 (213)
+|+.+++.+.+.|.+++.. ++ ... ..++..+++...... .+..|++.++.+.+.++.
T Consensus 19 iG~~~a~~l~~~G~~V~~~-~r~~~~-------------------~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 78 (261)
T 1gee_A 19 LGKSMAIRFATEKAKVVVN-YRSKED-------------------EANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQS 78 (261)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSCHH-------------------HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCChH-------------------HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 4889999888888887753 33 211 111111222111222 255799999999998887
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.+||-..|.
T Consensus 79 ~~~~~g~id~li~~Ag~ 95 (261)
T 1gee_A 79 AIKEFGKLDVMINNAGL 95 (261)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 7654 78899988774
No 372
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=56.24 E-value=39 Score=27.49 Aligned_cols=75 Identities=19% Similarity=0.166 Sum_probs=46.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+++++.+.+.|..|+.. ++..... ...++.+.+........+..|.|.++.+.+.++.+.+
T Consensus 20 IG~aiA~~la~~Ga~Vvi~-~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 20 IAFGVAKVLDQLGAKLVFT-YRKERSR----------------KELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSGGGH----------------HHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCHHHH----------------HHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4889999988999987743 3322100 1112222222111222356799999999999998877
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+++-..|+
T Consensus 83 ~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 83 DVGNIDGVYHSIAF 96 (256)
T ss_dssp HHCCCSEEEECCCC
T ss_pred HhCCCCEEEecccc
Confidence 4 67788866664
No 373
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=56.23 E-value=23 Score=28.98 Aligned_cols=69 Identities=12% Similarity=0.116 Sum_probs=45.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+++++.+.+.|..|+.. ++... ...+.+.+. ....+..|+|.++.+.+.++.+.+
T Consensus 39 IG~aia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (260)
T 3gem_A 39 VGLHCALRLLEHGHRVIIS-YRTEH-------------------ASVTELRQA---GAVALYGDFSCETGIMAFIDLLKT 95 (260)
T ss_dssp HHHHHHHHHHHTTCCEEEE-ESSCC-------------------HHHHHHHHH---TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCChH-------------------HHHHHHHhc---CCeEEECCCCCHHHHHHHHHHHHH
Confidence 4888998888888887643 32211 111112221 233366799999999999988877
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+||-..|.
T Consensus 96 ~~g~iD~lv~nAg~ 109 (260)
T 3gem_A 96 QTSSLRAVVHNASE 109 (260)
T ss_dssp HCSCCSEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 5 68899987774
No 374
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=55.90 E-value=35 Score=28.17 Aligned_cols=72 Identities=14% Similarity=0.121 Sum_probs=46.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..|+. +++... .+++..+++...... .+..|.|.++.+...++.+
T Consensus 20 IG~aia~~la~~G~~V~~-~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 79 (280)
T 3tox_A 20 IGRAAALLFAREGAKVVV-TARNGN-------------------ALAELTDEIAGGGGEAAALAGDVGDEALHEALVELA 79 (280)
T ss_dssp HHHHHHHHHHHTTCEEEE-CCSCHH-------------------HHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-EECCHH-------------------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 488999988888988764 333221 122222222222223 2346999999999999887
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 80 ~~~~g~iD~lvnnAg~ 95 (280)
T 3tox_A 80 VRRFGGLDTAFNNAGA 95 (280)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 765 78899887773
No 375
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=55.88 E-value=45 Score=29.55 Aligned_cols=110 Identities=14% Similarity=0.110 Sum_probs=64.5
Q ss_pred hHHHHHHHHhC---CCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 2 GKAVIKAADAA---GLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 2 G~~i~~~~~~~---~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
|+.+++.+.++ ..+|+.... ....|+.+...+..+.+...+ .+ .+ ..+| |++.-+-.....+.+..+
T Consensus 15 G~eLlrlL~~~~~p~~el~~~as--~~saG~~~~~~~~~~~~~~~~-~~----~~--~~~D-vvf~a~~~~~s~~~a~~~ 84 (366)
T 3pwk_A 15 GAQMIKMLEESTLPIDKIRYLAS--ARSAGKSLKFKDQDITIEETT-ET----AF--EGVD-IALFSAGSSTSAKYAPYA 84 (366)
T ss_dssp HHHHHHHHHTCCCCEEEEEEEEC--TTTTTCEEEETTEEEEEEECC-TT----TT--TTCS-EEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEEEEc--cccCCCcceecCCCceEeeCC-HH----Hh--cCCC-EEEECCChHhHHHHHHHH
Confidence 88999988754 456665432 234555554434334443211 11 11 2578 788888777889999999
Q ss_pred HhcCCCEEEEcCCC--CH------HHHH--HHHHccCCcEEEccC-hhHHHHHHHH
Q 028115 79 SKVGVPFVMGTTGG--DR------VRLH--ETIENSNVYAVISPQ-MGKQVVAFLA 123 (213)
Q Consensus 79 ~~~g~~~ViGTTG~--~~------~~~~--~~~~~~~~~~v~a~N-~SlGv~ll~~ 123 (213)
.+.|+.+|--++-| ++ .++. .+. ....+|-.|| +..++.+..+
T Consensus 85 ~~~G~~vIDlSa~~R~~~~~p~~vpevN~~~i~--~~~~iIanpgC~tt~~~l~l~ 138 (366)
T 3pwk_A 85 VKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALD--AHNGIIACPNCSTIQMMVALE 138 (366)
T ss_dssp HHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGT--TCCSEEECCCHHHHHHHHHHH
T ss_pred HHCCCEEEEcCCccccCCCceEEEccCCHHHHc--CCCCeEECCCcHHHHHHHHHH
Confidence 99999888777655 21 1221 121 1245777788 5555555444
No 376
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=55.79 E-value=60 Score=28.34 Aligned_cols=84 Identities=15% Similarity=0.072 Sum_probs=47.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
||+.+++.+.+.|++++. +++.+..... +...++.. ..+++++++.. ..|| +||=...+..+.+.++....
T Consensus 33 mG~~~A~~L~~~G~~V~v-~dr~~~~~~~---l~~~g~~~--~~s~~e~~~~a--~~~D-vVi~~vp~~~v~~vl~~l~~ 103 (358)
T 4e21_A 33 MGADMVRRLRKGGHECVV-YDLNVNAVQA---LEREGIAG--ARSIEEFCAKL--VKPR-VVWLMVPAAVVDSMLQRMTP 103 (358)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECSCHHHHHH---HHTTTCBC--CSSHHHHHHHS--CSSC-EEEECSCGGGHHHHHHHHGG
T ss_pred HHHHHHHHHHhCCCEEEE-EeCCHHHHHH---HHHCCCEE--eCCHHHHHhcC--CCCC-EEEEeCCHHHHHHHHHHHHh
Confidence 899999998888998764 5654422111 11112222 24666665442 2468 55555444466666655433
Q ss_pred ---cCCCEEEEcCCCC
Q 028115 81 ---VGVPFVMGTTGGD 93 (213)
Q Consensus 81 ---~g~~~ViGTTG~~ 93 (213)
.+.-+|..+|+..
T Consensus 104 ~l~~g~iiId~st~~~ 119 (358)
T 4e21_A 104 LLAANDIVIDGGNSHY 119 (358)
T ss_dssp GCCTTCEEEECSSCCH
T ss_pred hCCCCCEEEeCCCCCh
Confidence 4556666777664
No 377
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=55.77 E-value=51 Score=28.91 Aligned_cols=109 Identities=15% Similarity=0.158 Sum_probs=64.3
Q ss_pred hHHHHHHHHh---CCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 2 GKAVIKAADA---AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 2 G~~i~~~~~~---~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
|+.+++.+.+ +..+|+.... .+..|+.+.+.+..+.+...+ . +.+ ...| +++.-+-.....+....+
T Consensus 14 G~el~~lL~~h~fp~~el~~~~s--~~~aG~~~~~~~~~~~~~~~~---~--~~~--~~~D-vvf~a~~~~~s~~~a~~~ 83 (344)
T 3tz6_A 14 GQVMRTLLDERDFPASAVRFFAS--ARSQGRKLAFRGQEIEVEDAE---T--ADP--SGLD-IALFSAGSAMSKVQAPRF 83 (344)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEC--TTTSSCEEEETTEEEEEEETT---T--SCC--TTCS-EEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEEEC--cccCCCceeecCCceEEEeCC---H--HHh--ccCC-EEEECCChHHHHHHHHHH
Confidence 8889998774 4566665433 234566554434334443211 1 111 3578 788777777889999999
Q ss_pred HhcCCCEEEEcCCC-------------CHHHHHHHHHccCCcEEEccC-hhHHHHHHHH
Q 028115 79 SKVGVPFVMGTTGG-------------DRVRLHETIENSNVYAVISPQ-MGKQVVAFLA 123 (213)
Q Consensus 79 ~~~g~~~ViGTTG~-------------~~~~~~~~~~~~~~~~v~a~N-~SlGv~ll~~ 123 (213)
.+.|+.+|--++-| +.+ +.+.. ++..+|-.|| +..++.+..+
T Consensus 84 ~~~G~~vID~Sa~~R~~~~~p~~vpevN~~--~~i~~-~~~~iIanpgC~tt~~~l~l~ 139 (344)
T 3tz6_A 84 AAAGVTVIDNSSAWRKDPDVPLVVSEVNFE--RDAHR-RPKGIIANPNCTTMAAMPVLK 139 (344)
T ss_dssp HHTTCEEEECSSTTTTCTTSCBCCTTTSHH--HHTTC-CTTSEEECCCHHHHHHHHHHH
T ss_pred HhCCCEEEECCCccccCCCccEEEccCCCH--HHhhh-cCCCEEECCCcHHHHHHHHHH
Confidence 99999877766543 220 22221 1235777888 5555555444
No 378
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=55.63 E-value=61 Score=27.34 Aligned_cols=81 Identities=16% Similarity=0.103 Sum_probs=42.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHH---H
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE---L 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~---~ 77 (213)
||+.+++.+.+.|+++.. +++.+....+ +...++... .+++++++ .+|+|++=-..|..+...+. .
T Consensus 42 mG~~~a~~l~~~G~~V~~-~dr~~~~~~~---l~~~g~~~~--~~~~e~~~-----~aDvVi~~vp~~~~~~~v~~~~~~ 110 (320)
T 4dll_A 42 MGLPMARRLCEAGYALQV-WNRTPARAAS---LAALGATIH--EQARAAAR-----DADIVVSMLENGAVVQDVLFAQGV 110 (320)
T ss_dssp THHHHHHHHHHTTCEEEE-ECSCHHHHHH---HHTTTCEEE--SSHHHHHT-----TCSEEEECCSSHHHHHHHHTTTCH
T ss_pred HHHHHHHHHHhCCCeEEE-EcCCHHHHHH---HHHCCCEee--CCHHHHHh-----cCCEEEEECCCHHHHHHHHcchhH
Confidence 899999998888998764 5655422111 111133332 35655442 57833333333556666553 2
Q ss_pred --HHhcCCCEEEEcCCC
Q 028115 78 --YSKVGVPFVMGTTGG 92 (213)
Q Consensus 78 --~~~~g~~~ViGTTG~ 92 (213)
.++.+.-+|..+|+.
T Consensus 111 ~~~l~~~~~vi~~st~~ 127 (320)
T 4dll_A 111 AAAMKPGSLFLDMASIT 127 (320)
T ss_dssp HHHCCTTCEEEECSCCC
T ss_pred HhhCCCCCEEEecCCCC
Confidence 223444455555543
No 379
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=55.50 E-value=33 Score=27.48 Aligned_cols=73 Identities=12% Similarity=0.055 Sum_probs=46.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|..++.. ++.... . ..+++...+. .....+..|+|.++.+...++.+.+
T Consensus 28 iG~~ia~~l~~~G~~V~~~-~r~~~~-~---------------~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 28 IAYGIAKACKREGAELAFT-YVGDRF-K---------------DRITEFAAEF--GSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSGGG-H---------------HHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEE-ecchhh-H---------------HHHHHHHHHc--CCcEEEECCCCCHHHHHHHHHHHHH
Confidence 4889999888889887753 222110 0 0111111111 1233467899999999999998877
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+||-..|.
T Consensus 89 ~~g~id~lv~nAg~ 102 (271)
T 3ek2_A 89 HWDSLDGLVHSIGF 102 (271)
T ss_dssp HCSCEEEEEECCCC
T ss_pred HcCCCCEEEECCcc
Confidence 5 67788877764
No 380
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=55.35 E-value=27 Score=27.99 Aligned_cols=73 Identities=21% Similarity=0.234 Sum_probs=43.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+++......+ ..+++..+++.....+ .+..|++.++.+...++.+
T Consensus 33 iG~~la~~l~~~G~~v~~~~r~~~-------------------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 93 (274)
T 1ja9_A 33 IGRGIAIELGRRGASVVVNYGSSS-------------------KAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKA 93 (274)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCch-------------------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 478888888888888765322121 1112222222111223 2457999999999888876
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+|+-..|.
T Consensus 94 ~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 94 VSHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHHSCEEEEECCCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 654 67788877764
No 381
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=55.34 E-value=32 Score=28.27 Aligned_cols=72 Identities=13% Similarity=0.128 Sum_probs=46.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++.. ++.. +.+++..+++.....+ .+..|.|.++.+.+.++.+
T Consensus 38 IG~aia~~la~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 97 (271)
T 4ibo_A 38 LGRAMAEGLAVAGARILIN-GTDP-------------------SRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARL 97 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CSCH-------------------HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4888888888888887642 2221 1122222222222233 2446999999999999887
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+|+-..|.
T Consensus 98 ~~~~g~iD~lv~nAg~ 113 (271)
T 4ibo_A 98 DEQGIDVDILVNNAGI 113 (271)
T ss_dssp HHHTCCCCEEEECCCC
T ss_pred HHHCCCCCEEEECCCC
Confidence 764 58899988885
No 382
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=55.28 E-value=56 Score=26.98 Aligned_cols=72 Identities=14% Similarity=0.136 Sum_probs=43.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++.. ++.... ..+...+.+...... .+..|.|.++.+.+.++.+
T Consensus 59 IG~aia~~la~~G~~V~~~-~r~~~~------------------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 59 IGRAVSIAFAKEGANIAIA-YLDEEG------------------DANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSCHH------------------HHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCchH------------------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4888998888888887643 222110 011111111111233 2456999999999999887
Q ss_pred Hhc--CCCEEEEcCC
Q 028115 79 SKV--GVPFVMGTTG 91 (213)
Q Consensus 79 ~~~--g~~~ViGTTG 91 (213)
.+. ++.++|-..|
T Consensus 120 ~~~~g~iD~lvnnAg 134 (291)
T 3ijr_A 120 VRQLGSLNILVNNVA 134 (291)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 765 6888886655
No 383
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=55.28 E-value=42 Score=28.45 Aligned_cols=78 Identities=17% Similarity=0.107 Sum_probs=47.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCcc--ccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEE--SGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~--~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++.. +..... .+.+ ....+++.+++...... ++.|++.++.+...++.+
T Consensus 21 IG~~~a~~La~~Ga~Vv~~-~~~~~~~~~~R~------------~~~~~~~~~~l~~~~~~-~~~D~~~~~~~~~~~~~~ 86 (319)
T 1gz6_A 21 LGRAYALAFAERGALVVVN-DLGGDFKGVGKG------------SSAADKVVEEIRRRGGK-AVANYDSVEAGEKLVKTA 86 (319)
T ss_dssp HHHHHHHHHHHTTCEEEEE-CCCBCTTSCBCC------------SHHHHHHHHHHHHTTCE-EEEECCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCcccccccCC------------HHHHHHHHHHHHhhCCe-EEEeCCCHHHHHHHHHHH
Confidence 4889999988889888753 221100 0000 11223333333222344 678999999988888776
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 87 ~~~~g~iD~lVnnAG~ 102 (319)
T 1gz6_A 87 LDTFGRIDVVVNNAGI 102 (319)
T ss_dssp HHHTSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 654 58889887773
No 384
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=55.23 E-value=15 Score=31.70 Aligned_cols=86 Identities=13% Similarity=0.102 Sum_probs=40.1
Q ss_pred ChHHHHHHHHhCCC-eEEEEecCCCccccccccccCceeEeecC---CchhHHHhhhhcCCCCEEEEEcCC-hHHHHHHH
Q 028115 1 MGKAVIKAADAAGL-ELVPVSFGTEEESGQKVEVCGKEIQVHGL---SDRESVLASVFDKYPNMIVVDYTV-PAAVNGNA 75 (213)
Q Consensus 1 MG~~i~~~~~~~~~-elv~~~~~~~~~~g~~~~~~~~~v~i~~~---~~~~~~l~~~~~~~~d~VvIDFS~-p~~~~~~~ 75 (213)
+|+.+++.+...|. ++++ ++..+........+ |....+... .++.+.+.++....+| ++||++- ++.+...+
T Consensus 207 vG~~aiqlak~~Ga~~Vi~-~~~~~~~~~~a~~l-Ga~~vi~~~~~~~~~~~~v~~~~~~g~D-vvid~~G~~~~~~~~~ 283 (376)
T 1e3i_A 207 VGLSAIIGCKIAGASRIIA-IDINGEKFPKAKAL-GATDCLNPRELDKPVQDVITELTAGGVD-YSLDCAGTAQTLKAAV 283 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEE-ECSCGGGHHHHHHT-TCSEEECGGGCSSCHHHHHHHHHTSCBS-EEEESSCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeEEE-EcCCHHHHHHHHHh-CCcEEEccccccchHHHHHHHHhCCCcc-EEEECCCCHHHHHHHH
Confidence 47788888877787 5554 44332111000011 111111111 1233333332223567 7888875 45556666
Q ss_pred HHHHhc-CCCEEEEc
Q 028115 76 ELYSKV-GVPFVMGT 89 (213)
Q Consensus 76 ~~~~~~-g~~~ViGT 89 (213)
+.+... |.=+++|.
T Consensus 284 ~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 284 DCTVLGWGSCTVVGA 298 (376)
T ss_dssp HTBCTTTCEEEECCC
T ss_pred HHhhcCCCEEEEECC
Confidence 655555 55455554
No 385
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=55.17 E-value=13 Score=28.96 Aligned_cols=50 Identities=20% Similarity=0.296 Sum_probs=29.7
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh-cCCCEEEEcCCCCH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK-VGVPFVMGTTGGDR 94 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~-~g~~~ViGTTG~~~ 94 (213)
.+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+=| +...
T Consensus 35 ~~~~~al~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt-~~~~ 86 (230)
T 2oqr_A 35 TDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVT-ARDS 86 (230)
T ss_dssp CSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEE-CCHH
T ss_pred CCHHHHHHHHhccCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEe-CCCc
Confidence 455555555545579988999998852 2333433333 467777655 4443
No 386
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=55.14 E-value=41 Score=27.24 Aligned_cols=72 Identities=15% Similarity=0.151 Sum_probs=47.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCC-CC--EEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY-PN--MIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~-~d--~VvIDFS~p~~~~~~~~~ 77 (213)
+|+.+++.+.+.|..++.. ++.. +.+++..+++.... .. .+..|.|.++.+...++.
T Consensus 22 IG~aia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (262)
T 3pk0_A 22 IGRGIATVFARAGANVAVA-GRST-------------------ADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGR 81 (262)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 4889999888889887743 3322 12222222222211 22 356799999999999988
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.++|-..|.
T Consensus 82 ~~~~~g~id~lvnnAg~ 98 (262)
T 3pk0_A 82 AVEEFGGIDVVCANAGV 98 (262)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 7765 78899988884
No 387
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=55.12 E-value=21 Score=27.78 Aligned_cols=49 Identities=20% Similarity=0.253 Sum_probs=31.2
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChH-HHHHHHHHHHh--cCCCEEEEcCC
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK--VGVPFVMGTTG 91 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~--~g~~~ViGTTG 91 (213)
..+.++++..+....||.|++|...|. .-.+.++...+ ..+|+|+=|.-
T Consensus 37 ~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~ 88 (233)
T 1ys7_A 37 AVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSAR 88 (233)
T ss_dssp ESSHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECC
T ss_pred ECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcC
Confidence 345566666555567998899999885 23455555544 36777765543
No 388
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=55.08 E-value=81 Score=26.71 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=51.3
Q ss_pred chhHHHhhhhcCCCCEEEEEcCChH------HHHHHHHHHHhcC----CCEEEEcCCCCHHHHHHHHHccCCcEEEccCh
Q 028115 45 DRESVLASVFDKYPNMIVVDYTVPA------AVNGNAELYSKVG----VPFVMGTTGGDRVRLHETIENSNVYAVISPQM 114 (213)
Q Consensus 45 ~~~~~l~~~~~~~~d~VvIDFS~p~------~~~~~~~~~~~~g----~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~ 114 (213)
..++.++...+.+||.|.+=++... .+.+.++.+.+.| +++++|=..++.+- ++..+ .-.++++-
T Consensus 168 p~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~~~~~~~----a~~iG-ad~~~~da 242 (262)
T 1xrs_B 168 ANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGPRINNEI----AKELG-YDAGFGPG 242 (262)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECTTCCHHH----HHTTT-CSEEECTT
T ss_pred CHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECCcCCHHH----HHHcC-CeEEECCc
Confidence 3445555555568997677775443 4555677777766 78898888776533 22222 33677777
Q ss_pred hHHHHHHHHHHHHHHH
Q 028115 115 GKQVVAFLAAMEIMAE 130 (213)
Q Consensus 115 SlGv~ll~~l~~~aa~ 130 (213)
+-.+.+..+++....+
T Consensus 243 ~~~~~~a~~l~~~~~~ 258 (262)
T 1xrs_B 243 RFADDVATFAVKTLND 258 (262)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHh
Confidence 7777777777665543
No 389
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=55.07 E-value=56 Score=27.25 Aligned_cols=55 Identities=13% Similarity=-0.013 Sum_probs=38.8
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCC---EEEEcCCCCHHHHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP---FVMGTTGGDRVRLHET 100 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~---~ViGTTG~~~~~~~~~ 100 (213)
.|+...+.++...+|| +|+=++.+..+...++.+.+.|+. .|+|..+|+. ++..+
T Consensus 182 ~d~~~~l~~i~~~~~d-~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~g~~~~~~-~~~~~ 239 (375)
T 3i09_A 182 SDFSSFLLQAQSSKAQ-ILGLANAGGDTVNAIKAAKEFGITKTMKLAALLMFIN-DVHAL 239 (375)
T ss_dssp SCCHHHHHHHHHTCCS-EEEEECCHHHHHHHHHHHHHTTGGGTCEEEESSCCHH-HHHHH
T ss_pred ccHHHHHHHHHhCCCC-EEEEecCchhHHHHHHHHHHcCCCcCceEEecccchh-hHhhh
Confidence 4666667777667899 666677776777889999998864 5788766654 44444
No 390
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=54.99 E-value=23 Score=28.85 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=47.1
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..++.. ++.... .+.+++..+++...... .+..|.|.++.+...++.+
T Consensus 23 IG~aia~~la~~G~~V~~~-~r~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 85 (262)
T 3ksu_A 23 LGALTAKTFALESVNLVLH-YHQAKD----------------SDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA 85 (262)
T ss_dssp HHHHHHHHHTTSSCEEEEE-ESCGGG----------------HHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ecCccC----------------HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4888888888888887753 211100 01222222332222222 2467999999999999988
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 86 ~~~~g~iD~lvnnAg~ 101 (262)
T 3ksu_A 86 EKEFGKVDIAINTVGK 101 (262)
T ss_dssp HHHHCSEEEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 775 68889988884
No 391
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=54.96 E-value=1e+02 Score=26.43 Aligned_cols=79 Identities=18% Similarity=0.191 Sum_probs=48.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..|+.. ++..... +.+ ...+++..+++...... .+..|.+.++.+...++.+
T Consensus 57 IG~aia~~La~~Ga~Vvl~-~r~~~~~-~~l-----------~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~ 123 (346)
T 3kvo_A 57 IGKAIALKAAKDGANIVIA-AKTAQPH-PKL-----------LGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA 123 (346)
T ss_dssp HHHHHHHHHHTTTCEEEEE-ESCCSCC-SSS-----------CCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECChhhh-hhh-----------HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 4889999988889887754 3222100 000 01122222222222222 2457999999999999988
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 124 ~~~~g~iDilVnnAG~ 139 (346)
T 3kvo_A 124 IKKFGGIDILVNNASA 139 (346)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 876 89999988884
No 392
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=54.87 E-value=50 Score=26.67 Aligned_cols=72 Identities=15% Similarity=0.093 Sum_probs=44.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhh---hcC--CCCEEEEEcCChHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASV---FDK--YPNMIVVDYTVPAAVNGNA 75 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~---~~~--~~d~VvIDFS~p~~~~~~~ 75 (213)
+|+.+++.+.+.|.+++.. ++.+. .+++..+++ ... ....+..|++.++.+...+
T Consensus 18 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 77 (278)
T 1spx_A 18 IGRATAVLFAREGAKVTIT-GRHAE-------------------RLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEIL 77 (278)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHH
Confidence 4889999988889887753 33221 111111111 000 1122567999999999988
Q ss_pred HHHHhc--CCCEEEEcCCC
Q 028115 76 ELYSKV--GVPFVMGTTGG 92 (213)
Q Consensus 76 ~~~~~~--g~~~ViGTTG~ 92 (213)
+.+.+. ++.+|+-..|.
T Consensus 78 ~~~~~~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 78 STTLGKFGKLDILVNNAGA 96 (278)
T ss_dssp HHHHHHHSCCCEEEECCC-
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 877664 78899988875
No 393
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=54.83 E-value=37 Score=27.94 Aligned_cols=71 Identities=15% Similarity=0.104 Sum_probs=45.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|..++.. ++.. +.+++..+++ ......+-.|.|.++.+...++.+.+
T Consensus 39 IG~aia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (277)
T 4dqx_A 39 IGRATAELFAKNGAYVVVA-DVNE-------------------DAAVRVANEI-GSKAFGVRVDVSSAKDAESMVEKTTA 97 (277)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSH-------------------HHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4888888888888887643 3221 1112222221 11122356899999999999988876
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+||-..|.
T Consensus 98 ~~g~iD~lv~nAg~ 111 (277)
T 4dqx_A 98 KWGRVDVLVNNAGF 111 (277)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 5 78899988884
No 394
>3u4g_A NAMN:DMB phosphoribosyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.90A {Pyrococcus horikoshii}
Probab=54.80 E-value=4.2 Score=36.16 Aligned_cols=56 Identities=14% Similarity=0.070 Sum_probs=37.2
Q ss_pred EEEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCHH----HHHHHHHccCCcEEEc-cChh
Q 028115 60 MIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRV----RLHETIENSNVYAVIS-PQMG 115 (213)
Q Consensus 60 ~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~~----~~~~~~~~~~~~~v~a-~N~S 115 (213)
+|+.||+.-.++.-.++.....--++.||||.|=.+ ++..+.+.-++|++++ +|||
T Consensus 224 VvL~GG~qm~Aaal~a~~l~p~~~~~~i~TT~~v~~D~~a~~~~l~~~i~v~~~~~~~~F~ 284 (337)
T 3u4g_A 224 VVLAGGTQMLAVSALLKSLGEDLSRFMIATTRWVVEDPSATFIETAREIGIISYVAELDFS 284 (337)
T ss_dssp EEEESSHHHHHHHHHHHHTTCCCTTEEEEEEHHHHHCTTCCHHHHHHHHTCEEEEECCCCT
T ss_pred EEEeCcHHHHHHHHHHHHhCCccCCeEEEEeeeeeeCCCcCHHHHHHHhCCeEEEeCCCCC
Confidence 355668777777666665433336799999999543 4667776667777543 6666
No 395
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=54.55 E-value=39 Score=27.12 Aligned_cols=74 Identities=12% Similarity=0.200 Sum_probs=45.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++.. ++.... ..+++..+++...... .+..|+|.++.+...++.+
T Consensus 14 IG~~ia~~l~~~G~~V~~~-~r~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 75 (258)
T 3a28_C 14 IGRGISEKLAADGFDIAVA-DLPQQE-----------------EQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEA 75 (258)
T ss_dssp HHHHHHHHHHHHTCEEEEE-ECGGGH-----------------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCcch-----------------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4889999988888887643 322110 0022222222211222 2457999999999988877
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 76 ~~~~g~iD~lv~nAg~ 91 (258)
T 3a28_C 76 AEKLGGFDVLVNNAGI 91 (258)
T ss_dssp HHHHTCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 664 68899988774
No 396
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=54.52 E-value=16 Score=26.28 Aligned_cols=49 Identities=14% Similarity=0.200 Sum_probs=23.1
Q ss_pred CchhHHHhhhhc-CCCCEEEEEcCChHH-HHHHHHHHHhc--CCCEEEEcCCCC
Q 028115 44 SDRESVLASVFD-KYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGD 93 (213)
Q Consensus 44 ~~~~~~l~~~~~-~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~~~ViGTTG~~ 93 (213)
.+.++++..+.. ..||.|++|+..|.. -.+.++...+. .+|+|+ .|+..
T Consensus 36 ~~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~-ls~~~ 88 (154)
T 2qsj_A 36 ETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVAL-ISGET 88 (154)
T ss_dssp SSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEEEE-C----
T ss_pred cCHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEE-EeCCC
Confidence 455666665555 578988999988752 23344444332 455554 44544
No 397
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=54.45 E-value=48 Score=26.56 Aligned_cols=39 Identities=8% Similarity=0.053 Sum_probs=23.9
Q ss_pred hhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcCC
Q 028115 51 ASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTG 91 (213)
Q Consensus 51 ~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG 91 (213)
+.+....+|.+|+--+.+ ..+.++.+.+.++|+|+--+.
T Consensus 58 ~~l~~~~vdgiIi~~~~~--~~~~~~~~~~~~iPvV~~~~~ 96 (291)
T 3egc_A 58 GQFFERRVDGLILAPSEG--EHDYLRTELPKTFPIVAVNRE 96 (291)
T ss_dssp HHHHHTTCSEEEECCCSS--CCHHHHHSSCTTSCEEEESSC
T ss_pred HHHHHCCCCEEEEeCCCC--ChHHHHHhhccCCCEEEEecc
Confidence 333445788444333222 456777888899999876543
No 398
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=54.43 E-value=7.5 Score=34.22 Aligned_cols=79 Identities=22% Similarity=0.241 Sum_probs=44.8
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCCccc------------cc-----cc-cccCceeEeecCCchhHHHhhhhcCCCCEE
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTEEES------------GQ-----KV-EVCGKEIQVHGLSDRESVLASVFDKYPNMI 61 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~~~~------------g~-----~~-~~~~~~v~i~~~~~~~~~l~~~~~~~~d~V 61 (213)
+||.+++++. .++++|++..+..+... |. .+ ...+..+.+. .+.++.+ ..+| +
T Consensus 13 IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~--~~~~~~~-----~~vD-i 84 (343)
T 2yyy_A 13 IGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVE--GTILDII-----EDAD-I 84 (343)
T ss_dssp HHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCC--CBGGGTG-----GGCS-E
T ss_pred HHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEEC--CchHHhc-----cCCC-E
Confidence 4899999987 56899999876432110 11 00 0111112221 1222222 2578 6
Q ss_pred EEEcCChHHHHHHHH-HHHhcCCCEEE
Q 028115 62 VVDYTVPAAVNGNAE-LYSKVGVPFVM 87 (213)
Q Consensus 62 vIDFS~p~~~~~~~~-~~~~~g~~~Vi 87 (213)
+++-|-.....+..+ .+++.|+++|+
T Consensus 85 V~eatg~~~s~~~a~~~~l~aG~~VI~ 111 (343)
T 2yyy_A 85 VVDGAPKKIGKQNLENIYKPHKVKAIL 111 (343)
T ss_dssp EEECCCTTHHHHHHHHTTTTTTCEEEE
T ss_pred EEECCCccccHHHHHHHHHHCCCEEEE
Confidence 776665555588885 88999988655
No 399
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=54.42 E-value=6.3 Score=34.31 Aligned_cols=86 Identities=19% Similarity=0.266 Sum_probs=41.3
Q ss_pred ChHHHHHHHHhCCC-eEEEEecCCCccccccc-cccCceeEe-ecCCchhHHHhh---hhcCCCCEEEEEcCC-hHHHHH
Q 028115 1 MGKAVIKAADAAGL-ELVPVSFGTEEESGQKV-EVCGKEIQV-HGLSDRESVLAS---VFDKYPNMIVVDYTV-PAAVNG 73 (213)
Q Consensus 1 MG~~i~~~~~~~~~-elv~~~~~~~~~~g~~~-~~~~~~v~i-~~~~~~~~~l~~---~~~~~~d~VvIDFS~-p~~~~~ 73 (213)
+|++.++.+...|. +++ +++..+.... .+ .+ |....+ +...+..+.+.+ +....+| ++||.+. ++.+..
T Consensus 194 vG~~aiqlak~~Ga~~Vi-~~~~~~~~~~-~a~~l-Ga~~vi~~~~~~~~~~i~~~~~~~~gg~D-vvid~~G~~~~~~~ 269 (370)
T 4ej6_A 194 IGLLTVQLARLAGATTVI-LSTRQATKRR-LAEEV-GATATVDPSAGDVVEAIAGPVGLVPGGVD-VVIECAGVAETVKQ 269 (370)
T ss_dssp HHHHHHHHHHHTTCSEEE-EECSCHHHHH-HHHHH-TCSEEECTTSSCHHHHHHSTTSSSTTCEE-EEEECSCCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEE-EECCCHHHHH-HHHHc-CCCEEECCCCcCHHHHHHhhhhccCCCCC-EEEECCCCHHHHHH
Confidence 47788888878887 454 3443331100 00 01 111111 112233333322 1112456 7888877 566666
Q ss_pred HHHHHHhcCCCEEEEcC
Q 028115 74 NAELYSKVGVPFVMGTT 90 (213)
Q Consensus 74 ~~~~~~~~g~~~ViGTT 90 (213)
.++.+...|.=+++|..
T Consensus 270 ~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 270 STRLAKAGGTVVILGVL 286 (370)
T ss_dssp HHHHEEEEEEEEECSCC
T ss_pred HHHHhccCCEEEEEecc
Confidence 66666556655555543
No 400
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=54.34 E-value=65 Score=25.82 Aligned_cols=72 Identities=10% Similarity=0.111 Sum_probs=45.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+++.. ++.+. .+++..+++.....+ .+..|.+.++.+.+.++.+
T Consensus 21 iG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (260)
T 2ae2_A 21 IGYGIVEELASLGASVYTC-SRNQK-------------------ELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTV 80 (260)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4888999888888887753 33221 112222222111222 2457999999999998887
Q ss_pred Hhc---CCCEEEEcCCC
Q 028115 79 SKV---GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~---g~~~ViGTTG~ 92 (213)
.+. ++.+|+-..|.
T Consensus 81 ~~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 81 ANHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHHTTTCCCEEEECCCC
T ss_pred HHHcCCCCCEEEECCCC
Confidence 763 58899988874
No 401
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=54.30 E-value=66 Score=29.09 Aligned_cols=49 Identities=12% Similarity=0.114 Sum_probs=36.2
Q ss_pred chhHHHhhhh-cCCCCEEEEEcCChHHHHHHHHHHHhcCC-CEEEEcCCCCH
Q 028115 45 DRESVLASVF-DKYPNMIVVDYTVPAAVNGNAELYSKVGV-PFVMGTTGGDR 94 (213)
Q Consensus 45 ~~~~~l~~~~-~~~~d~VvIDFS~p~~~~~~~~~~~~~g~-~~ViGTTG~~~ 94 (213)
++...+..+. ...+| |||=|..++.+...++.+.+.|+ .+.|+|.+|..
T Consensus 231 ~~~~~l~~i~~~s~a~-vIi~~~~~~~~~~~~~~~~~~g~~~~~i~s~~~~~ 281 (555)
T 2e4u_A 231 SYDSVIRELLQKPNAR-VVVLFMRSDDSRELIAAANRVNASFTWVASDGWGA 281 (555)
T ss_dssp HHHHHHHHHHTCTTCC-EEEEECCHHHHHHHHHHHHHTTCCCEEEECTTTTT
T ss_pred HHHHHHHHHhccCCCC-EEEEEcCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 4445566653 35788 77888888888889988888775 46689999964
No 402
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=54.24 E-value=39 Score=27.33 Aligned_cols=71 Identities=21% Similarity=0.261 Sum_probs=45.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.++|.+++.. ++.+. ..++..+++.. ....+..|.+.++.+.+.++.+.+
T Consensus 19 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~ 77 (260)
T 1nff_A 19 MGASHVRAMVAEGAKVVFG-DILDE-------------------EGKAMAAELAD-AARYVHLDVTQPAQWKAAVDTAVT 77 (260)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHTGG-GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHhhc-CceEEEecCCCHHHHHHHHHHHHH
Confidence 4889999888889887753 32211 11221122111 122256799999999998887766
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+|+-..|.
T Consensus 78 ~~g~iD~lv~~Ag~ 91 (260)
T 1nff_A 78 AFGGLHVLVNNAGI 91 (260)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 4 78899988774
No 403
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=54.15 E-value=32 Score=27.69 Aligned_cols=71 Identities=15% Similarity=0.100 Sum_probs=45.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|..++.. ++.... .++..+++ ......+..|+|.++.+...++.+.+
T Consensus 19 IG~aia~~l~~~G~~V~~~-~r~~~~-------------------~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (257)
T 3tpc_A 19 LGAAVTRMLAQEGATVLGL-DLKPPA-------------------GEEPAAEL-GAAVRFRNADVTNEADATAALAFAKQ 77 (257)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSCC--------------------------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCChHH-------------------HHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4899999988889987753 332211 11111111 01223356799999999999988877
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.++|-..|.
T Consensus 78 ~~g~id~lv~nAg~ 91 (257)
T 3tpc_A 78 EFGHVHGLVNCAGT 91 (257)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 5 78899988775
No 404
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=53.95 E-value=65 Score=26.20 Aligned_cols=72 Identities=17% Similarity=0.105 Sum_probs=46.3
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCC---C--EEEEEcCChHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYP---N--MIVVDYTVPAAVNGNA 75 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~---d--~VvIDFS~p~~~~~~~ 75 (213)
+|+.+++.+.+.|..++.. ++... .+++..+++..... . .+..|.|.++.+...+
T Consensus 23 IG~aia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 82 (281)
T 3svt_A 23 IGKGVAAGLVAAGASVMIV-GRNPD-------------------KLAGAVQELEALGANGGAIRYEPTDITNEDETARAV 82 (281)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHH
Confidence 4889999888889887643 33221 11222222221111 2 2457999999999999
Q ss_pred HHHHhc--CCCEEEEcCCC
Q 028115 76 ELYSKV--GVPFVMGTTGG 92 (213)
Q Consensus 76 ~~~~~~--g~~~ViGTTG~ 92 (213)
+.+.+. ++.+|+-..|.
T Consensus 83 ~~~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 83 DAVTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCc
Confidence 988764 68889887775
No 405
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=53.80 E-value=50 Score=26.40 Aligned_cols=70 Identities=11% Similarity=0.017 Sum_probs=45.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.++|..++.. ++... ..++..+++ .....+..|.|.++.+.+.++.+.+
T Consensus 14 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 71 (247)
T 3dii_A 14 IGKQICLDFLEAGDKVCFI-DIDEK-------------------RSADFAKER--PNLFYFHGDVADPLTLKKFVEYAME 71 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHTTC--TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHhc--ccCCeEEeeCCCHHHHHHHHHHHHH
Confidence 4899999988889887753 32211 112211111 0111356799999999999988877
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+++-..|.
T Consensus 72 ~~g~id~lv~nAg~ 85 (247)
T 3dii_A 72 KLQRIDVLVNNACR 85 (247)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HcCCCCEEEECCCC
Confidence 5 78899988874
No 406
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=53.73 E-value=27 Score=28.73 Aligned_cols=71 Identities=18% Similarity=0.128 Sum_probs=46.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|..|+.. ++.. +.+++..+++. .....+..|.|.++.+...++.+.+
T Consensus 40 IG~aia~~la~~G~~V~~~-~r~~-------------------~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~ 98 (272)
T 4dyv_A 40 VGRAVAVALAGAGYGVALA-GRRL-------------------DALQETAAEIG-DDALCVPTDVTDPDSVRALFTATVE 98 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHT-SCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCH-------------------HHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 4788888888888887643 3221 12222222221 1233356799999999999988776
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+||-..|.
T Consensus 99 ~~g~iD~lVnnAg~ 112 (272)
T 4dyv_A 99 KFGRVDVLFNNAGT 112 (272)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 5 78899988775
No 407
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=53.58 E-value=9.6 Score=32.32 Aligned_cols=38 Identities=13% Similarity=0.185 Sum_probs=32.0
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHH
Q 028115 62 VVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHET 100 (213)
Q Consensus 62 vIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~~ 100 (213)
+||||.++...+..++|.+.|.=.|++- |.+.+.++++
T Consensus 6 vIDls~~~~~~~l~~A~~~~GFF~v~nH-Gi~~~li~~~ 43 (280)
T 3on7_A 6 TIDYRAADSAKRFVESLRETGFGVLSNH-PIDKELVERI 43 (280)
T ss_dssp EEETTSTTHHHHHHHHHHHHSEEEEESC-SSCHHHHHHH
T ss_pred EEECCChhHHHHHHHHHHhCCEEEEECC-CCCHHHHHHH
Confidence 7999999999999999999999999874 8886654443
No 408
>1dp4_A Atrial natriuretic peptide receptor A; periplasmic binding protein fold, dimer, hormone/growth FACT receptor, lyase complex; HET: NAG; 2.00A {Rattus norvegicus} SCOP: c.93.1.1 PDB: 1t34_A* 3a3k_A*
Probab=53.54 E-value=57 Score=27.87 Aligned_cols=49 Identities=12% Similarity=0.057 Sum_probs=37.6
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCC----EEEEcCCCCH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP----FVMGTTGGDR 94 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~----~ViGTTG~~~ 94 (213)
.|+...+..+.. .+| |||=+..++.+...++.+.+.|+. +.+++.+|+.
T Consensus 194 ~d~~~~l~~i~~-~~~-viv~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~~~~~~ 246 (435)
T 1dp4_A 194 DHYPKLLRAVRR-KGR-VIYICSSPDAFRNLMLLALNAGLTGEDYVFFHLDVFGQ 246 (435)
T ss_dssp GGHHHHHHHHHH-HCS-EEEEESCHHHHHHHHHHHHHTTCCTTTCEEEEECTTCT
T ss_pred hhHHHHHHHHHh-hCc-eEEEecChHHHHHHHHHHHHcCCCCCCEEEEEEecccc
Confidence 456666777766 789 778888888888899999998874 6678887764
No 409
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=53.53 E-value=82 Score=24.97 Aligned_cols=41 Identities=22% Similarity=0.280 Sum_probs=25.4
Q ss_pred HhhhhcCCCCEEEEEcCCh---HHHHHHHHHHHhcCCCEEEEcC
Q 028115 50 LASVFDKYPNMIVVDYTVP---AAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p---~~~~~~~~~~~~~g~~~ViGTT 90 (213)
++.+....+|.+|+--+.+ +...+.++.+.+.|+|+|+--+
T Consensus 64 ~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~~ 107 (298)
T 3tb6_A 64 LENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINA 107 (298)
T ss_dssp HHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHCCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEec
Confidence 3334445788444432222 2456778888899999987544
No 410
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=53.52 E-value=13 Score=32.88 Aligned_cols=81 Identities=23% Similarity=0.250 Sum_probs=44.8
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCCC-c----------ccc----------ccccccCceeEeecCCchhHHHhhhhcCCC
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGTE-E----------ESG----------QKVEVCGKEIQVHGLSDRESVLASVFDKYP 58 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~~-~----------~~g----------~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~ 58 (213)
+||.+.+++. ++++++|+.-+... + .-| ..+.+.|..+.+....++++. . ..+...
T Consensus 13 IGr~v~r~l~~~~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~dp~~~-~-w~~~gv 90 (342)
T 2ep7_A 13 IGRSFFRASWGREEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKDPSQI-P-WGDLGV 90 (342)
T ss_dssp HHHHHHHHHTTCTTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSSGGGC-C-HHHHTC
T ss_pred HHHHHHHHHHhCCCceEEEEecCCChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcCChhhC-C-ccccCC
Confidence 4899999987 56899998765311 0 011 112233334555432233221 0 111256
Q ss_pred CEEEEEcCChHHHHHHHHHHHhcCCC
Q 028115 59 NMIVVDYTVPAAVNGNAELYSKVGVP 84 (213)
Q Consensus 59 d~VvIDFS~p~~~~~~~~~~~~~g~~ 84 (213)
| ++++-|-.....+....+++.|..
T Consensus 91 D-iV~estG~~~s~e~a~~hl~aGak 115 (342)
T 2ep7_A 91 D-VVIEATGVFRDRENASKHLQGGAK 115 (342)
T ss_dssp S-EEEECSSSCCBHHHHTTTGGGTCS
T ss_pred C-EEEECCCchhhhhhhHHHHhcCCC
Confidence 7 777766666666677777777765
No 411
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=53.47 E-value=38 Score=27.68 Aligned_cols=32 Identities=16% Similarity=0.096 Sum_probs=26.6
Q ss_pred EEEEcCChHHHHHHHHHHHhc--CCCEEEEcCCC
Q 028115 61 IVVDYTVPAAVNGNAELYSKV--GVPFVMGTTGG 92 (213)
Q Consensus 61 VvIDFS~p~~~~~~~~~~~~~--g~~~ViGTTG~ 92 (213)
+..|.|.++.+.+.++.+.+. ++.+||-..|.
T Consensus 64 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 97 (266)
T 3p19_A 64 AQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGM 97 (266)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCC
T ss_pred EEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCc
Confidence 567999999999999887765 78889888875
No 412
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=53.30 E-value=44 Score=27.21 Aligned_cols=72 Identities=14% Similarity=0.133 Sum_probs=44.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+|+.. ++... .+++..+++.....+ .+..|++.++.+...++.+
T Consensus 33 IG~aia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 92 (273)
T 1ae1_A 33 IGYAIVEELAGLGARVYTC-SRNEK-------------------ELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTV 92 (273)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 3788888888788876643 33221 112222222111223 2567999999999998887
Q ss_pred Hh---cCCCEEEEcCCC
Q 028115 79 SK---VGVPFVMGTTGG 92 (213)
Q Consensus 79 ~~---~g~~~ViGTTG~ 92 (213)
.+ -++.+||-..|.
T Consensus 93 ~~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 93 AHVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHHTTSCCCEEEECCCC
T ss_pred HHHcCCCCcEEEECCCC
Confidence 66 368889888774
No 413
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=53.12 E-value=20 Score=30.80 Aligned_cols=87 Identities=17% Similarity=0.191 Sum_probs=42.4
Q ss_pred ChHHHHHHHHhCCC-eEEEEecCCCccccccccccCceeEeecC---CchhHHHhhhhcCCCCEEEEEcCC-hHHHHHHH
Q 028115 1 MGKAVIKAADAAGL-ELVPVSFGTEEESGQKVEVCGKEIQVHGL---SDRESVLASVFDKYPNMIVVDYTV-PAAVNGNA 75 (213)
Q Consensus 1 MG~~i~~~~~~~~~-elv~~~~~~~~~~g~~~~~~~~~v~i~~~---~~~~~~l~~~~~~~~d~VvIDFS~-p~~~~~~~ 75 (213)
+|+.+++.+...|. ++++ ++..+........+ |....+... +++.+.+.++....+| ++||.+- ++.+...+
T Consensus 203 vG~~a~qla~~~Ga~~Vi~-~~~~~~~~~~~~~l-Ga~~vi~~~~~~~~~~~~~~~~~~~g~D-~vid~~g~~~~~~~~~ 279 (374)
T 2jhf_A 203 VGLSVIMGCKAAGAARIIG-VDINKDKFAKAKEV-GATECVNPQDYKKPIQEVLTEMSNGGVD-FSFEVIGRLDTMVTAL 279 (374)
T ss_dssp HHHHHHHHHHHTTCSEEEE-ECSCGGGHHHHHHT-TCSEEECGGGCSSCHHHHHHHHTTSCBS-EEEECSCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeEEE-EcCCHHHHHHHHHh-CCceEecccccchhHHHHHHHHhCCCCc-EEEECCCCHHHHHHHH
Confidence 47888888887887 5554 44333211000011 111111111 2333334333223567 7888885 45666666
Q ss_pred HHHHhc-CCCEEEEcC
Q 028115 76 ELYSKV-GVPFVMGTT 90 (213)
Q Consensus 76 ~~~~~~-g~~~ViGTT 90 (213)
+..... |.=+.+|..
T Consensus 280 ~~l~~~~G~iv~~G~~ 295 (374)
T 2jhf_A 280 SCCQEAYGVSVIVGVP 295 (374)
T ss_dssp HHBCTTTCEEEECSCC
T ss_pred HHhhcCCcEEEEeccC
Confidence 665555 555555543
No 414
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=53.08 E-value=28 Score=28.07 Aligned_cols=72 Identities=18% Similarity=0.229 Sum_probs=45.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcC----CCCEEEEEcCChHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK----YPNMIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~----~~d~VvIDFS~p~~~~~~~~ 76 (213)
+|+.+++.+.+.|.+++.. ++.+. .+++..+++... ....+..|++.++.+...++
T Consensus 19 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (260)
T 2z1n_A 19 LGFASALELARNGARLLLF-SRNRE-------------------KLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFE 78 (260)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHH
Confidence 4889999988889887753 33221 111111221110 12224579999999999888
Q ss_pred HHHhc-CCCEEEEcCCC
Q 028115 77 LYSKV-GVPFVMGTTGG 92 (213)
Q Consensus 77 ~~~~~-g~~~ViGTTG~ 92 (213)
.+.+. |+.+|+-..|.
T Consensus 79 ~~~~~~gid~lv~~Ag~ 95 (260)
T 2z1n_A 79 KARDLGGADILVYSTGG 95 (260)
T ss_dssp HHHHTTCCSEEEECCCC
T ss_pred HHHHhcCCCEEEECCCC
Confidence 77653 68999988884
No 415
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=52.85 E-value=32 Score=27.74 Aligned_cols=72 Identities=19% Similarity=0.261 Sum_probs=45.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcC-CCC--EEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK-YPN--MIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~-~~d--~VvIDFS~p~~~~~~~~~ 77 (213)
+|+.+++.+.+.|.+++.. ++.+. .+++..+++... ... .+..|++.++.+.+.++.
T Consensus 19 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~ 78 (263)
T 3ai3_A 19 IGLAIAEGFAKEGAHIVLV-ARQVD-------------------RLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVES 78 (263)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCHH-------------------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 4889999888888887753 33221 111111221111 122 245699999999999887
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.+|+-..|.
T Consensus 79 ~~~~~g~id~lv~~Ag~ 95 (263)
T 3ai3_A 79 VRSSFGGADILVNNAGT 95 (263)
T ss_dssp HHHHHSSCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 7665 78899988874
No 416
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=52.50 E-value=76 Score=25.44 Aligned_cols=77 Identities=12% Similarity=0.108 Sum_probs=40.8
Q ss_pred eEeecCCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh--cCCCEEEEcCCCC-HHHHHHHHHccCCcEEEccC
Q 028115 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGD-RVRLHETIENSNVYAVISPQ 113 (213)
Q Consensus 38 v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~~~ViGTTG~~-~~~~~~~~~~~~~~~v~a~N 113 (213)
+.+....+.+++++.+....+|.|++|...|.. -.+.++...+ ..+|+|+- |+.. .+...+. ..+++--++.-.
T Consensus 154 ~~v~~a~~~~eal~~l~~~~~dlvl~D~~mp~~~G~~l~~~ir~~~~~~piI~l-t~~~~~~~~~~~-~~~G~~~~l~KP 231 (254)
T 2ayx_A 154 YQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGV-TANALAEEKQRC-LESGMDSCLSKP 231 (254)
T ss_dssp SEEEEECCSHHHHHHHHHSCCSEEEEEESSCSSCCHHHHHHHHHHHCCSCEEEE-ESSTTSHHHHHH-HHCCCEEEEESS
T ss_pred CEEEEECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhcCCCCcEEEE-ECCCCHHHHHHH-HHcCCceEEECC
Confidence 344344566777766666679988999998852 1223333222 35776654 4544 3333332 234543344444
Q ss_pred hhH
Q 028115 114 MGK 116 (213)
Q Consensus 114 ~Sl 116 (213)
|+.
T Consensus 232 ~~~ 234 (254)
T 2ayx_A 232 VTL 234 (254)
T ss_dssp CCH
T ss_pred CCH
Confidence 544
No 417
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=52.44 E-value=31 Score=28.50 Aligned_cols=64 Identities=16% Similarity=0.128 Sum_probs=34.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA 75 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~ 75 (213)
||+.+++.+.+.|+++.. +++.+..... + ...++.. ..++++++. .+|+|++=-..+..+.+.+
T Consensus 12 mG~~~a~~l~~~G~~V~~-~dr~~~~~~~-~--~~~g~~~--~~~~~~~~~-----~advvi~~v~~~~~~~~v~ 75 (287)
T 3pdu_A 12 MGGPMAANLVRAGFDVTV-WNRNPAKCAP-L--VALGARQ--ASSPAEVCA-----ACDITIAMLADPAAAREVC 75 (287)
T ss_dssp THHHHHHHHHHHTCCEEE-ECSSGGGGHH-H--HHHTCEE--CSCHHHHHH-----HCSEEEECCSSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEE-EcCCHHHHHH-H--HHCCCee--cCCHHHHHH-----cCCEEEEEcCCHHHHHHHH
Confidence 899999998877888764 5655432111 1 1112333 245555543 3673333333344666655
No 418
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=52.34 E-value=39 Score=28.50 Aligned_cols=71 Identities=17% Similarity=0.086 Sum_probs=46.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+++++.+.+.|..|+. .++.. +.++++.+++. .+.-.+..|.|.++.+...++.+.+
T Consensus 41 IG~aiA~~la~~Ga~V~i-~~r~~-------------------~~l~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 41 IGLAAAKRFVAEGARVFI-TGRRK-------------------DVLDAAIAEIG-GGAVGIQADSANLAELDRLYEKVKA 99 (273)
T ss_dssp HHHHHHHHHHHTTCEEEE-EESCH-------------------HHHHHHHHHHC-TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-EECCH-------------------HHHHHHHHHcC-CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 488889888888888764 23221 12333334331 1222367899999999999998876
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.++|--.|.
T Consensus 100 ~~G~iDiLVNNAG~ 113 (273)
T 4fgs_A 100 EAGRIDVLFVNAGG 113 (273)
T ss_dssp HHSCEEEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 3 46677766663
No 419
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=51.99 E-value=45 Score=24.90 Aligned_cols=66 Identities=11% Similarity=0.138 Sum_probs=36.3
Q ss_pred HhhhhcCCCCEEEEEcCChH---HHHHHHHHHHhcC---CCEEEEcCCCC----HHHHHHHHHccCCcEEEccChh
Q 028115 50 LASVFDKYPNMIVVDYTVPA---AVNGNAELYSKVG---VPFVMGTTGGD----RVRLHETIENSNVYAVISPQMG 115 (213)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~---~~~~~~~~~~~~g---~~~ViGTTG~~----~~~~~~~~~~~~~~~v~a~N~S 115 (213)
++...+.+||.|.+=++... .+.+.++.+.+.+ +++++|=.... .++..+..++.++-.++.|-.+
T Consensus 47 v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~~g~~ 122 (137)
T 1ccw_A 47 IKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAPGTP 122 (137)
T ss_dssp HHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCTTCC
T ss_pred HHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEECCCCC
Confidence 33334457896677765543 3445666666654 66888754432 2222344455666666655443
No 420
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=51.98 E-value=44 Score=28.37 Aligned_cols=77 Identities=14% Similarity=0.183 Sum_probs=47.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.++|..+++..-... +.. .+.+++..+.+.....+ .+..|.|.++.+.+.++.+
T Consensus 17 IG~aia~~L~~~G~~V~~~~r~~~---~r~------------~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~ 81 (324)
T 3u9l_A 17 FGRLTAEALAGAGHRVYASMRDIV---GRN------------ASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI 81 (324)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCTT---TTT------------HHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEecCccc---ccC------------HHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence 489999999999999886432110 000 00111111111111222 3567999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|+
T Consensus 82 ~~~~g~iD~lVnnAG~ 97 (324)
T 3u9l_A 82 IGEDGRIDVLIHNAGH 97 (324)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 765 78999988884
No 421
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=51.96 E-value=31 Score=29.68 Aligned_cols=63 Identities=13% Similarity=0.116 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHhcCCCEEE--EcCC----CCHHHHHHHHHc------cCCcEEEccChhHHHHHHHHHHHHHHHh
Q 028115 67 VPAAVNGNAELYSKVGVPFVM--GTTG----GDRVRLHETIEN------SNVYAVISPQMGKQVVAFLAAMEIMAEQ 131 (213)
Q Consensus 67 ~p~~~~~~~~~~~~~g~~~Vi--GTTG----~~~~~~~~~~~~------~~~~~v~a~N~SlGv~ll~~l~~~aa~~ 131 (213)
..+++..++++.++.|+.-++ |||| ++.+|..++.+. .++|++.-..- ...-..++++.|.+.
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~--st~~ai~la~~A~~~ 105 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY--SVDTAIELGKSAIDS 105 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS--SHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc--CHHHHHHHHHHHHHc
No 422
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=51.94 E-value=37 Score=26.76 Aligned_cols=72 Identities=14% Similarity=0.049 Sum_probs=45.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhh-hc--CCCCEEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASV-FD--KYPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~-~~--~~~d~VvIDFS~p~~~~~~~~~ 77 (213)
+|+.+++.+.+.|.+++.. ++... .+++..+++ .. .....+..|++.++.+.+.++.
T Consensus 14 iG~~~a~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (250)
T 2cfc_A 14 NGLAIATRFLARGDRVAAL-DLSAE-------------------TLEETARTHWHAYADKVLRVRADVADEGDVNAAIAA 73 (250)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 4889999988888887753 33221 111111111 00 0122356799999999998887
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.+|+-..|.
T Consensus 74 ~~~~~~~id~li~~Ag~ 90 (250)
T 2cfc_A 74 TMEQFGAIDVLVNNAGI 90 (250)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 7664 78899887774
No 423
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=51.89 E-value=48 Score=27.44 Aligned_cols=54 Identities=17% Similarity=0.212 Sum_probs=37.0
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCC----EEEEcCCC-CHHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP----FVMGTTGG-DRVRLH 98 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~----~ViGTTG~-~~~~~~ 98 (213)
.|....+..+....|| +|+=+..+..+...++.+.+.|+. .++|+.++ +...++
T Consensus 181 ~d~~~~~~~l~~~~~d-~v~~~~~~~~a~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~ 239 (368)
T 4eyg_A 181 PDFAPFLQRMKDAKPD-AMFVFVPAGQGGNFMKQFAERGLDKSGIKVIGPGDVMDDDLLN 239 (368)
T ss_dssp CCCHHHHHHHHHHCCS-EEEEECCTTCHHHHHHHHHHTTGGGTTCEEEEETTTTCHHHHT
T ss_pred CcHHHHHHHHHhcCCC-EEEEeccchHHHHHHHHHHHcCCCcCCceEEecCcccCHHHHH
Confidence 4666666666666899 566555666788899999999876 36777754 444343
No 424
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=51.77 E-value=49 Score=27.02 Aligned_cols=73 Identities=15% Similarity=0.223 Sum_probs=45.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++.. ++.... ..++..+++.....+ .+..|.+.++.+...++.+
T Consensus 41 IG~~ia~~l~~~G~~V~~~-~r~~~~------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 41 IGREMAMELGRRGCKVIVN-YANSTE------------------SAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSCHH------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCchH------------------HHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHH
Confidence 4888998888888887753 222100 011111122111223 2457999999999988877
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 102 ~~~~g~iD~lv~~Ag~ 117 (283)
T 1g0o_A 102 VKIFGKLDIVCSNSGV 117 (283)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 663 68899988774
No 425
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=51.64 E-value=94 Score=25.10 Aligned_cols=86 Identities=14% Similarity=0.134 Sum_probs=45.3
Q ss_pred ChHHHHHHHHhCC-CeEEEEecCCCccc-cccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh----------
Q 028115 1 MGKAVIKAADAAG-LELVPVSFGTEEES-GQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP---------- 68 (213)
Q Consensus 1 MG~~i~~~~~~~~-~elv~~~~~~~~~~-g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p---------- 68 (213)
+|+.+++.+.+.| .++.+. .+.+... .+.+...+..+...+..|.+.. .+.. ..+| +||..+.+
T Consensus 17 iG~~l~~~L~~~g~~~V~~~-~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l-~~~~-~~~d-~vi~~a~~~~~~~~~~~~ 92 (299)
T 2wm3_A 17 QGGSVARTLLEDGTFKVRVV-TRNPRKKAAKELRLQGAEVVQGDQDDQVIM-ELAL-NGAY-ATFIVTNYWESCSQEQEV 92 (299)
T ss_dssp HHHHHHHHHHHHCSSEEEEE-ESCTTSHHHHHHHHTTCEEEECCTTCHHHH-HHHH-TTCS-EEEECCCHHHHTCHHHHH
T ss_pred HHHHHHHHHHhcCCceEEEE-EcCCCCHHHHHHHHCCCEEEEecCCCHHHH-HHHH-hcCC-EEEEeCCCCccccchHHH
Confidence 3889999888666 888765 3332111 0111011111111122344442 2222 3578 78887653
Q ss_pred HHHHHHHHHHHhcCCCEEEEcC
Q 028115 69 AAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 69 ~~~~~~~~~~~~~g~~~ViGTT 90 (213)
......++.|.+.|++-++-++
T Consensus 93 ~~~~~~~~aa~~~gv~~iv~~S 114 (299)
T 2wm3_A 93 KQGKLLADLARRLGLHYVVYSG 114 (299)
T ss_dssp HHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEEc
Confidence 2455677888888987555444
No 426
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=51.50 E-value=79 Score=25.88 Aligned_cols=79 Identities=18% Similarity=0.155 Sum_probs=48.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..|+.. ++..... +.+ ...+++..+++...... .+..|.|.++.+...++.+
T Consensus 21 IG~aia~~l~~~G~~V~~~-~r~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 87 (285)
T 3sc4_A 21 IGLAIAKRVAADGANVALV-AKSAEPH-PKL-----------PGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT 87 (285)
T ss_dssp HHHHHHHHHHTTTCEEEEE-ESCCSCC-SSS-----------CCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECChhhh-hhh-----------hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4899999988889987753 3322110 000 01222222222211222 2456999999999999988
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 88 ~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 88 VEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 775 78999988884
No 427
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A
Probab=51.36 E-value=43 Score=27.45 Aligned_cols=73 Identities=14% Similarity=0.054 Sum_probs=53.4
Q ss_pred CCC--EEEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCHH-------HHHHHHHccCCcEE-EccChhHHHHHHHHHHH
Q 028115 57 YPN--MIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRV-------RLHETIENSNVYAV-ISPQMGKQVVAFLAAME 126 (213)
Q Consensus 57 ~~d--~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~~-------~~~~~~~~~~~~~v-~a~N~SlGv~ll~~l~~ 126 (213)
.+| .+++|-|.++..........+.++|+|+--+-.+.. +.+.+++.-++|++ .|+....|+.-++..+.
T Consensus 83 ~~d~ii~V~D~t~~~~~~~~~~~l~~~~~pvilv~NK~Dl~~~~~i~~~~~~l~~~lg~~vi~~SA~~g~gi~el~~~i~ 162 (258)
T 3a1s_A 83 DADLVILVADSVNPEQSLYLLLEILEMEKKVILAMTAIDEAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEELKEKIV 162 (258)
T ss_dssp CCSEEEEEEETTSCHHHHHHHHHHHTTTCCEEEEEECHHHHHHTTCCBCHHHHHHHHCSCEEECCTTTCTTHHHHHHHHH
T ss_pred CCCEEEEEeCCCchhhHHHHHHHHHhcCCCEEEEEECcCCCCccchHHHHHHHHHHcCCCEEEEEeeCCcCHHHHHHHHH
Confidence 677 368899999888888888889999999877766532 24567776678876 46677788876666554
Q ss_pred HHH
Q 028115 127 IMA 129 (213)
Q Consensus 127 ~aa 129 (213)
..+
T Consensus 163 ~~~ 165 (258)
T 3a1s_A 163 EYA 165 (258)
T ss_dssp HHH
T ss_pred HHh
Confidence 444
No 428
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=51.23 E-value=40 Score=27.08 Aligned_cols=71 Identities=21% Similarity=0.208 Sum_probs=44.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|.+++.. ++.+ ...++..+++.. ....+..|.+.++.+...++.+.+
T Consensus 24 IG~~ia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~ 82 (263)
T 3ak4_A 24 IGAAIARALDKAGATVAIA-DLDV-------------------MAAQAVVAGLEN-GGFAVEVDVTKRASVDAAMQKAID 82 (263)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHTCTT-CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHhc-CCeEEEEeCCCHHHHHHHHHHHHH
Confidence 4888888888888887643 3221 111222222111 222356799999999988887765
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+|+-..|.
T Consensus 83 ~~g~iD~lv~~Ag~ 96 (263)
T 3ak4_A 83 ALGGFDLLCANAGV 96 (263)
T ss_dssp HHTCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 4 68899988774
No 429
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=51.12 E-value=35 Score=27.57 Aligned_cols=72 Identities=21% Similarity=0.182 Sum_probs=44.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcC--CCC--EEEEEcCChHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK--YPN--MIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~--~~d--~VvIDFS~p~~~~~~~~ 76 (213)
+|+.+++.+.+.|.+++.. ++... .+++..+++... ... .+..|+|.++.+...++
T Consensus 25 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 84 (267)
T 1iy8_A 25 LGRATAVRLAAEGAKLSLV-DVSSE-------------------GLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVT 84 (267)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHH
Confidence 4888999888888887753 33221 111111111111 122 24569999999999988
Q ss_pred HHHhc--CCCEEEEcCCC
Q 028115 77 LYSKV--GVPFVMGTTGG 92 (213)
Q Consensus 77 ~~~~~--g~~~ViGTTG~ 92 (213)
.+.+. ++.+||-..|.
T Consensus 85 ~~~~~~g~id~lv~nAg~ 102 (267)
T 1iy8_A 85 ATTERFGRIDGFFNNAGI 102 (267)
T ss_dssp HHHHHHSCCSEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 77664 68889877774
No 430
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=51.05 E-value=31 Score=30.89 Aligned_cols=49 Identities=12% Similarity=0.057 Sum_probs=38.0
Q ss_pred chhHHH-hhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCC-CEEEEcCCCCH
Q 028115 45 DRESVL-ASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGV-PFVMGTTGGDR 94 (213)
Q Consensus 45 ~~~~~l-~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~-~~ViGTTG~~~ 94 (213)
+....+ ..+....+| |||=|..++.+...++.+.+.|+ .+.|+|.||+.
T Consensus 230 d~~~~l~~~i~~s~a~-vIi~~~~~~~~~~l~~~~~~~g~~~~wI~s~~w~~ 280 (479)
T 3sm9_A 230 SYDSVIRELLQKPNAR-VVVLFMRSDDSRELIAAASRANASFTWVASDGWGA 280 (479)
T ss_dssp HHHHHHHHHHTCTTCC-EEEEECCHHHHHHHHHHHHHTTCCCEEEECTTTTT
T ss_pred HHHHHHHHHHhcCCCe-EEEEEcChHHHHHHHHHHHHhCCEEEEEEechhhc
Confidence 444444 334456788 78889999999999999999887 58899999974
No 431
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=51.04 E-value=93 Score=24.84 Aligned_cols=39 Identities=5% Similarity=0.049 Sum_probs=26.1
Q ss_pred hhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEc
Q 028115 51 ASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGT 89 (213)
Q Consensus 51 ~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGT 89 (213)
..+....+|.+++--+.++...+.++.+.+.++|+|.--
T Consensus 55 ~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~ipvV~~~ 93 (303)
T 3d02_A 55 EDLIARKVDAITIVPNDANVLEPVFKKARDAGIVVLTNE 93 (303)
T ss_dssp HHHHHTTCSEEEECCSCHHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEEe
Confidence 333345788545544556666677888889999988653
No 432
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=51.02 E-value=50 Score=27.34 Aligned_cols=84 Identities=12% Similarity=0.065 Sum_probs=49.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..++.. +......+..+ .....+.+++..+++...... .+..|.|.++.+...++.+
T Consensus 40 IG~aia~~la~~G~~V~~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 111 (299)
T 3t7c_A 40 QGRSHAITLAREGADIIAI-DVCKQLDGVKL-------PMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDG 111 (299)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECCSCCTTCCS-------CCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ecccccccccc-------cccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 4899999988889988753 32211000000 000011223333333222233 3567999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 112 ~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 112 VTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 765 68888877773
No 433
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=50.86 E-value=67 Score=25.53 Aligned_cols=58 Identities=7% Similarity=0.083 Sum_probs=42.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHccCCcE-EE-ccChhHHHHH
Q 028115 58 PNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYA-VI-SPQMGKQVVA 120 (213)
Q Consensus 58 ~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~~~~~~~~~~-v~-a~N~SlGv~l 120 (213)
.|....=|++++.+.+.++.+.+.|+.+|+|-+ -...++++.+.|. ++ |..-|+--.+
T Consensus 118 ~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~-----~~~~~A~~~Gl~~vli~sg~eSI~~Ai 177 (196)
T 2q5c_A 118 VKIKEFLFSSEDEITTLISKVKTENIKIVVSGK-----TVTDEAIKQGLYGETINSGEESLRRAI 177 (196)
T ss_dssp CEEEEEEECSGGGHHHHHHHHHHTTCCEEEECH-----HHHHHHHHTTCEEEECCCCHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHHCCCeEEECCH-----HHHHHHHHcCCcEEEEecCHHHHHHHH
Confidence 344467789999999999999999999999944 1245566778664 33 5578875433
No 434
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=50.77 E-value=40 Score=26.47 Aligned_cols=72 Identities=15% Similarity=0.176 Sum_probs=45.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhh-cCCCC--EEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVF-DKYPN--MIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~-~~~~d--~VvIDFS~p~~~~~~~~~ 77 (213)
+|+.+++.+.++|..|+.. ++... .+++..+++. ..... .+..|.|.++.+.+.++.
T Consensus 14 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 73 (235)
T 3l77_A 14 IGEAIARALARDGYALALG-ARSVD-------------------RLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKK 73 (235)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHH
Confidence 4889999988889887643 33221 1122112111 01223 245699999999998887
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.++|-..|.
T Consensus 74 ~~~~~g~id~li~~Ag~ 90 (235)
T 3l77_A 74 VLERFGDVDVVVANAGL 90 (235)
T ss_dssp HHHHHSSCSEEEECCCC
T ss_pred HHHhcCCCCEEEECCcc
Confidence 7665 78899988885
No 435
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=50.63 E-value=61 Score=26.39 Aligned_cols=36 Identities=22% Similarity=0.201 Sum_probs=24.6
Q ss_pred hcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEc
Q 028115 54 FDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGT 89 (213)
Q Consensus 54 ~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGT 89 (213)
....+|.+++--..++.+.+.++.+.+.|+|+|.--
T Consensus 54 ~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 89 (313)
T 2h3h_A 54 IAEGVNGIAIAPSDPTAVIPTIKKALEMGIPVVTLD 89 (313)
T ss_dssp HHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEeC
Confidence 335788545544455555677888889999998743
No 436
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=50.57 E-value=47 Score=26.65 Aligned_cols=72 Identities=13% Similarity=0.143 Sum_probs=44.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+|+.. ++... .+++..+++.....+ .+..|.+.++.+...++.+
T Consensus 26 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (260)
T 2zat_A 26 IGLAIARRLAQDGAHVVVS-SRKQE-------------------NVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMA 85 (260)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 4888888888888887653 32211 112222222111223 2457999999999888877
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+|+-..|.
T Consensus 86 ~~~~g~iD~lv~~Ag~ 101 (260)
T 2zat_A 86 VNLHGGVDILVSNAAV 101 (260)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 654 68888877663
No 437
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=50.52 E-value=50 Score=29.31 Aligned_cols=86 Identities=19% Similarity=0.147 Sum_probs=50.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCC-C---------------ccc------cccccccCceeEeecCCchhHHHhhhhcCCC
Q 028115 1 MGKAVIKAADAAGLELVPVSFGT-E---------------EES------GQKVEVCGKEIQVHGLSDRESVLASVFDKYP 58 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~-~---------------~~~------g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~ 58 (213)
+||.+.+++.+.++++|+.-|+. . +.. |..+.+.|..+.+....|++. +. ..+...
T Consensus 18 IGrlv~R~~~~~~veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~dp~~-i~-W~~~gv 95 (346)
T 3h9e_O 18 IGRLVLRACMEKGVKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISVYQCKEPKQ-IP-WRAVGS 95 (346)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG-CC-GGGGTS
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCCChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEEEEEecCChhh-CC-cccccc
Confidence 48899998886679999876531 0 111 122234455677764444443 11 112367
Q ss_pred CEEEEEcCChHHHHHHHHHHHhcCCC-EEEEc
Q 028115 59 NMIVVDYTVPAAVNGNAELYSKVGVP-FVMGT 89 (213)
Q Consensus 59 d~VvIDFS~p~~~~~~~~~~~~~g~~-~ViGT 89 (213)
| ++++-|-.....+.....++.|.. +||-.
T Consensus 96 D-iVlesTG~f~s~e~a~~hl~aGAkkVVIsa 126 (346)
T 3h9e_O 96 P-YVVESTGVYLSIQAASDHISAGAQRVVISA 126 (346)
T ss_dssp C-EEEECSSSCCSHHHHHHHHHTTCSEEEESS
T ss_pred c-EEEEeccccCCHHHHHHHHHcCCCEEEECC
Confidence 8 788866666666667777777763 44433
No 438
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=50.44 E-value=34 Score=29.54 Aligned_cols=49 Identities=12% Similarity=0.124 Sum_probs=40.0
Q ss_pred EEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHccCCcEEEccC
Q 028115 61 IVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQ 113 (213)
Q Consensus 61 VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N 113 (213)
+-||=+.|+.+...++. |.++|=-.+|.+.+++-.++.+.+.|+++-++
T Consensus 100 iSIDT~~~~Va~aAl~a----Ga~iINdVsg~~d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 100 LSIDTYKPAVMRAALAA----GADLINDIWGFRQPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp EEEECCCHHHHHHHHHH----TCSEEEETTTTCSTTHHHHHSSSSCEEEEECC
T ss_pred EEEECCCHHHHHHHHHc----CCCEEEECCCCCchHHHHHHHHhCCCEEEECC
Confidence 79999999987665554 99999999999866677777778899887654
No 439
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=50.42 E-value=64 Score=27.06 Aligned_cols=18 Identities=6% Similarity=-0.123 Sum_probs=10.1
Q ss_pred ChHHHHHHHHHHHhcCCC
Q 028115 67 VPAAVNGNAELYSKVGVP 84 (213)
Q Consensus 67 ~p~~~~~~~~~~~~~g~~ 84 (213)
.++...+.++.+.+.|..
T Consensus 104 ~~~~~~~~a~~~~~~g~d 121 (311)
T 1jub_A 104 SAAENIAMLKKIQESDFS 121 (311)
T ss_dssp SHHHHHHHHHHHHHSCCC
T ss_pred CHHHHHHHHHHHHhcCCC
Confidence 455555555555555544
No 440
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=50.30 E-value=52 Score=26.28 Aligned_cols=72 Identities=14% Similarity=0.111 Sum_probs=45.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+++.. ++... .+++..+++...... .+..|++.++.+...++.+
T Consensus 26 iG~~la~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (266)
T 1xq1_A 26 IGHAIVEEFAGFGAVIHTC-ARNEY-------------------ELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTV 85 (266)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHH
Confidence 3788888888888887653 33211 112222222111222 3567999999999888876
Q ss_pred Hh---cCCCEEEEcCCC
Q 028115 79 SK---VGVPFVMGTTGG 92 (213)
Q Consensus 79 ~~---~g~~~ViGTTG~ 92 (213)
.+ .++.+||-..|.
T Consensus 86 ~~~~~~~id~li~~Ag~ 102 (266)
T 1xq1_A 86 SSMFGGKLDILINNLGA 102 (266)
T ss_dssp HHHHTTCCSEEEEECCC
T ss_pred HHHhCCCCcEEEECCCC
Confidence 65 468899888775
No 441
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=50.16 E-value=1e+02 Score=25.19 Aligned_cols=55 Identities=13% Similarity=0.155 Sum_probs=39.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHccCCcE-EEccChhHH
Q 028115 58 PNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYA-VISPQMGKQ 117 (213)
Q Consensus 58 ~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~~~~~~~~~~-v~a~N~SlG 117 (213)
.|....=|++++.+.+.++.+.+.|+.+|+|.+ -...++++.+++. ++-+.-|+-
T Consensus 130 ~~i~~~~~~~~ee~~~~i~~l~~~G~~vVVG~~-----~~~~~A~~~Gl~~vlI~s~eSI~ 185 (225)
T 2pju_A 130 LRLDQRSYITEEDARGQINELKANGTEAVVGAG-----LITDLAEEAGMTGIFIYSAATVR 185 (225)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHTTCCEEEESH-----HHHHHHHHTTSEEEESSCHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHHCCCCEEECCH-----HHHHHHHHcCCcEEEECCHHHHH
Confidence 344467788999999999999999999999954 1245566778664 444455553
No 442
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=50.08 E-value=86 Score=25.53 Aligned_cols=72 Identities=21% Similarity=0.220 Sum_probs=44.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhc-----CCCC--EEEEEcCChHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFD-----KYPN--MIVVDYTVPAAVNG 73 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~-----~~~d--~VvIDFS~p~~~~~ 73 (213)
+|+.+++.+.+.|.+|+.. ++... .+++..+++.. .... .+..|++.++.+..
T Consensus 30 IG~~la~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~ 89 (303)
T 1yxm_A 30 IGKAIVKELLELGSNVVIA-SRKLE-------------------RLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNN 89 (303)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHH
Confidence 4888898888888887653 33221 11111111111 1122 25579999999999
Q ss_pred HHHHHHhc--CCCEEEEcCCC
Q 028115 74 NAELYSKV--GVPFVMGTTGG 92 (213)
Q Consensus 74 ~~~~~~~~--g~~~ViGTTG~ 92 (213)
.++.+.+. ++.+||-..|.
T Consensus 90 ~~~~~~~~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 90 LVKSTLDTFGKINFLVNNGGG 110 (303)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 88877654 68899988883
No 443
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=50.02 E-value=92 Score=25.92 Aligned_cols=20 Identities=20% Similarity=0.109 Sum_probs=15.5
Q ss_pred ChHHHHHHHHhCCCeEEEEe
Q 028115 1 MGKAVIKAADAAGLELVPVS 20 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~ 20 (213)
.|+.|++.+.+.|.++.+..
T Consensus 22 iG~~l~~~L~~~g~~V~~l~ 41 (346)
T 3i6i_A 22 IGQFVATASLDAHRPTYILA 41 (346)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEE
Confidence 38899998887788887643
No 444
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=50.01 E-value=8.3 Score=33.19 Aligned_cols=19 Identities=32% Similarity=0.464 Sum_probs=13.4
Q ss_pred ChHHHHHHHHhCCCeEEEE
Q 028115 1 MGKAVIKAADAAGLELVPV 19 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~ 19 (213)
+|+++++.+...|.++++.
T Consensus 180 iG~~~~~~a~~~Ga~Vi~~ 198 (353)
T 4dup_A 180 IGTTAIQLARAFGAEVYAT 198 (353)
T ss_dssp HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEE
Confidence 4777787777778776643
No 445
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=49.87 E-value=21 Score=28.90 Aligned_cols=90 Identities=13% Similarity=0.094 Sum_probs=53.0
Q ss_pred ChHHHHHHHHhCCC----eEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHH
Q 028115 1 MGKAVIKAADAAGL----ELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 1 MG~~i~~~~~~~~~----elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (213)
||+.+++.+.+.|+ ++. ++++.+........ ..++.. ..+.++++. .+| +||=.+.|..+.+.++
T Consensus 13 mG~~~a~~l~~~g~~~~~~V~-~~~r~~~~~~~~~~--~~g~~~--~~~~~e~~~-----~aD-vVilav~~~~~~~v~~ 81 (247)
T 3gt0_A 13 MGMAMIGGMINKNIVSSNQII-CSDLNTANLKNASE--KYGLTT--TTDNNEVAK-----NAD-ILILSIKPDLYASIIN 81 (247)
T ss_dssp HHHHHHHHHHHTTSSCGGGEE-EECSCHHHHHHHHH--HHCCEE--CSCHHHHHH-----HCS-EEEECSCTTTHHHHC-
T ss_pred HHHHHHHHHHhCCCCCCCeEE-EEeCCHHHHHHHHH--HhCCEE--eCChHHHHH-----hCC-EEEEEeCHHHHHHHHH
Confidence 79999999888787 665 45654422111000 113333 245555443 478 7788888888888776
Q ss_pred HHHh---cCCCEEEEcCCCCHHHHHHHH
Q 028115 77 LYSK---VGVPFVMGTTGGDRVRLHETI 101 (213)
Q Consensus 77 ~~~~---~g~~~ViGTTG~~~~~~~~~~ 101 (213)
.... .+.-+|.-+.|.+.+.+++..
T Consensus 82 ~l~~~l~~~~~vvs~~~gi~~~~l~~~~ 109 (247)
T 3gt0_A 82 EIKEIIKNDAIIVTIAAGKSIESTENAF 109 (247)
T ss_dssp --CCSSCTTCEEEECSCCSCHHHHHHHH
T ss_pred HHHhhcCCCCEEEEecCCCCHHHHHHHh
Confidence 6543 244455578889887776654
No 446
>3i8s_A Ferrous iron transport protein B; GTPase, GPCR, iron uptake, FEO, cell inner membrane, cell ME GTP-binding, ION transport, membrane; 1.80A {Escherichia coli} PDB: 3i8x_A* 3i92_A* 3hyr_A 3hyt_A* 2wic_A* 2wib_A* 2wia_A*
Probab=49.86 E-value=65 Score=26.52 Aligned_cols=74 Identities=11% Similarity=0.054 Sum_probs=54.1
Q ss_pred CCCC--EEEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCHH-------HHHHHHHccCCcEE-EccChhHHHHHHHHHH
Q 028115 56 KYPN--MIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRV-------RLHETIENSNVYAV-ISPQMGKQVVAFLAAM 125 (213)
Q Consensus 56 ~~~d--~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~~-------~~~~~~~~~~~~~v-~a~N~SlGv~ll~~l~ 125 (213)
..+| +.++|-|.++..........+.++|+|+--+-.+.. +.+.+++.-++|++ .|+-...|+.-++.
T Consensus 84 ~~~d~ii~VvD~~~~~~~~~~~~~l~~~~~p~ivv~NK~Dl~~~~~~~~~~~~l~~~lg~~~i~~SA~~g~gi~el~~-- 161 (274)
T 3i8s_A 84 GDADLLINVVDASNLERNLYLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALKL-- 161 (274)
T ss_dssp TCCSEEEEEEEGGGHHHHHHHHHHHHHHTCCEEEEEECHHHHHHTTEEECHHHHHHHHTSCEEECCCGGGHHHHHHHH--
T ss_pred cCCCEEEEEecCCChHHHHHHHHHHHhcCCCEEEEEECccchhhhhHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHH--
Confidence 3678 468999999998888899999999999987776632 24566666678876 46777888776554
Q ss_pred HHHHHhc
Q 028115 126 EIMAEQF 132 (213)
Q Consensus 126 ~~aa~~l 132 (213)
.+.+.+
T Consensus 162 -~i~~~~ 167 (274)
T 3i8s_A 162 -AIDRYK 167 (274)
T ss_dssp -HHHTCC
T ss_pred -HHHHHH
Confidence 344444
No 447
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=49.82 E-value=34 Score=29.53 Aligned_cols=73 Identities=15% Similarity=0.073 Sum_probs=54.7
Q ss_pred EEEEcC-ChHHHHHHHHHHHhcCCCEEEEcCCCCH-HHHHHHHHccCCcEEEccCh---hHHHHHHHHHHHHHHHhcCCC
Q 028115 61 IVVDYT-VPAAVNGNAELYSKVGVPFVMGTTGGDR-VRLHETIENSNVYAVISPQM---GKQVVAFLAAMEIMAEQFPGA 135 (213)
Q Consensus 61 VvIDFS-~p~~~~~~~~~~~~~g~~~ViGTTG~~~-~~~~~~~~~~~~~~v~a~N~---SlGv~ll~~l~~~aa~~l~~~ 135 (213)
|.||-+ --+...+.++.|.+.|+..+| ||--. ......+++.++-++++.-| ++|++.|++.++ + +
T Consensus 198 IaV~~GgGtsG~~~~i~~a~~~GvDt~I--TGe~~~~~~~~~A~E~ginVI~AGHyATEt~Gv~aL~~~Le---~-~--- 268 (278)
T 3rxy_A 198 IAVVHGAGTNGGYAVARAYFDHGVRTVL--YIHIAPEEAERLRREGGGNLIVTGHIASDLVGINRYVQALE---E-R--- 268 (278)
T ss_dssp EEECCSSSSCCHHHHHHHHHHTTCCEEE--ESCCCHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHH---H-T---
T ss_pred EEEEcCCCCCCcHHHHHHHHHcCCCEEE--EecCchHHHHHHHHHcCCeEEEeccchHhHHHHHHHHHHHH---H-c---
Confidence 677777 223455888999999999999 99654 44547888889999999776 689988887765 2 3
Q ss_pred CCCCcEEEEec
Q 028115 136 FSGYSLQVLES 146 (213)
Q Consensus 136 ~~~~dieI~E~ 146 (213)
.+|++..
T Consensus 269 ----Glevi~~ 275 (278)
T 3rxy_A 269 ----GVEVVRM 275 (278)
T ss_dssp ----TCEEEEC
T ss_pred ----CCeeecc
Confidence 5787753
No 448
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=49.80 E-value=58 Score=26.46 Aligned_cols=84 Identities=18% Similarity=0.123 Sum_probs=49.1
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..|+.. ++..... . ...+....+.+++..+.+...... .+..|.|.++.+...++.+
T Consensus 22 IG~a~a~~l~~~G~~V~~~-~r~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 93 (281)
T 3s55_A 22 MGRSHAVALAEAGADIAIC-DRCENSD-V------VGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEA 93 (281)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECCSCCT-T------CSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEE-eCCcccc-c------cccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 4899999998999987753 3321100 0 000000011222222222222233 2456999999999999888
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 94 ~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 94 EDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHTCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 765 78899988884
No 449
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=49.77 E-value=95 Score=25.94 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=43.7
Q ss_pred ChHHHHHHHHhC-CCeEEEEecCCCccccccccccCceeEeecCC-chhHHHhhhhcCCCCEEEEEcC---ChH------
Q 028115 1 MGKAVIKAADAA-GLELVPVSFGTEEESGQKVEVCGKEIQVHGLS-DRESVLASVFDKYPNMIVVDYT---VPA------ 69 (213)
Q Consensus 1 MG~~i~~~~~~~-~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~-~~~~~l~~~~~~~~d~VvIDFS---~p~------ 69 (213)
.|+.+++.+.+. |+++++. ++.+..........+..+...+.. |.+. +.++. ..+| +||.+. .+.
T Consensus 36 iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~-~~~~~-~~~d-~Vih~A~~~~~~~~~~~~ 111 (372)
T 3slg_A 36 IGHHLSKRILETTDWEVFGM-DMQTDRLGDLVKHERMHFFEGDITINKEW-VEYHV-KKCD-VILPLVAIATPATYVKQP 111 (372)
T ss_dssp HHHHHHHHHHHHSSCEEEEE-ESCCTTTGGGGGSTTEEEEECCTTTCHHH-HHHHH-HHCS-EEEECBCCCCHHHHHHCH
T ss_pred HHHHHHHHHHhCCCCEEEEE-eCChhhhhhhccCCCeEEEeCccCCCHHH-HHHHh-ccCC-EEEEcCccccHHHHhhCH
Confidence 388999998854 8998875 433321111111111111111112 3332 22222 2588 889843 332
Q ss_pred ---------HHHHHHHHHHhcCCCEEEEcC
Q 028115 70 ---------AVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 70 ---------~~~~~~~~~~~~g~~~ViGTT 90 (213)
.+...++.|.+.+..+|.-+|
T Consensus 112 ~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS 141 (372)
T 3slg_A 112 LRVFELDFEANLPIVRSAVKYGKHLVFPST 141 (372)
T ss_dssp HHHHHHHTTTTHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcEEEeCc
Confidence 124578888888866665444
No 450
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=49.73 E-value=54 Score=27.26 Aligned_cols=54 Identities=9% Similarity=0.052 Sum_probs=40.4
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCC-EEEEcCCCCHHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRLH 98 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~-~ViGTTG~~~~~~~ 98 (213)
.|....+..+....|| +|+=++.+..+...++.+.+.|+. .++|+.++...++.
T Consensus 183 ~d~~~~~~~l~~~~~d-~v~~~~~~~~a~~~~~~~~~~g~~~~~i~~~~~~~~~~~ 237 (364)
T 3lop_A 183 ANVGPAVDKLLAADVQ-AIFLGATAEPAAQFVRQYRARGGEAQLLGLSSIDPGILQ 237 (364)
T ss_dssp CCCHHHHHHHHHSCCS-EEEEESCHHHHHHHHHHHHHTTCCCEEEECTTSCHHHHH
T ss_pred ccHHHHHHHHHhCCCC-EEEEecCcHHHHHHHHHHHHcCCCCeEEEeccCChHHHH
Confidence 4666666666667899 667677888888999999998863 36788898866543
No 451
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=49.67 E-value=29 Score=30.03 Aligned_cols=49 Identities=14% Similarity=0.201 Sum_probs=38.6
Q ss_pred EEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCC-HHHHHHHHHccCCcEEEccC
Q 028115 61 IVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGD-RVRLHETIENSNVYAVISPQ 113 (213)
Q Consensus 61 VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~-~~~~~~~~~~~~~~~v~a~N 113 (213)
+.||=+.|+.+...++. |.++|=-.+|++ ++++-.++.+.+.|+++.++
T Consensus 118 iSIDT~~~~V~~aAl~a----Ga~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 118 ISIDTYKAEVAKQAIEA----GAHIINDIWGAKAEPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp EEEECSCHHHHHHHHHH----TCCEEEETTTTSSCTHHHHHHHHHTCCEEEECC
T ss_pred EEEeCCCHHHHHHHHHc----CCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeC
Confidence 78999999877665554 999999999986 55666677777888888776
No 452
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=49.50 E-value=51 Score=26.85 Aligned_cols=72 Identities=14% Similarity=0.131 Sum_probs=45.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCC-----CCEEEEEcCChHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY-----PNMIVVDYTVPAAVNGNA 75 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~-----~d~VvIDFS~p~~~~~~~ 75 (213)
+|+.+++.+.+.|.+|+.. ++... .+++..+++.... ...+..|++.++.+...+
T Consensus 18 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 77 (280)
T 1xkq_A 18 IGRTTAILFAQEGANVTIT-GRSSE-------------------RLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQII 77 (280)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHH
Confidence 4889999988889887753 33221 1111112221111 122557999999999998
Q ss_pred HHHHhc--CCCEEEEcCCC
Q 028115 76 ELYSKV--GVPFVMGTTGG 92 (213)
Q Consensus 76 ~~~~~~--g~~~ViGTTG~ 92 (213)
+.+.+. ++.+||-..|.
T Consensus 78 ~~~~~~~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 78 NSTLKQFGKIDVLVNNAGA 96 (280)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 877664 68888877774
No 453
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=49.43 E-value=44 Score=27.54 Aligned_cols=71 Identities=13% Similarity=0.104 Sum_probs=46.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|..|+.. ++.. +.+++..+++ ......+..|.|.++.+...++.+.+
T Consensus 41 IG~aia~~la~~G~~V~~~-~r~~-------------------~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (277)
T 3gvc_A 41 IGLAVARRLADEGCHVLCA-DIDG-------------------DAADAAATKI-GCGAAACRVDVSDEQQIIAMVDACVA 99 (277)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSH-------------------HHHHHHHHHH-CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHc-CCcceEEEecCCCHHHHHHHHHHHHH
Confidence 4788888888888887643 2221 1122222222 11222356799999999999988776
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+||-..|.
T Consensus 100 ~~g~iD~lvnnAg~ 113 (277)
T 3gvc_A 100 AFGGVDKLVANAGV 113 (277)
T ss_dssp HHSSCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 4 78899988885
No 454
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=49.37 E-value=41 Score=27.27 Aligned_cols=71 Identities=21% Similarity=0.214 Sum_probs=46.3
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|.+++.. ++... .+++...+. ......+..|.+.++.+...++.+.+
T Consensus 17 IG~~~a~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~ 75 (281)
T 3m1a_A 17 FGRAIAEAAVAAGDTVIGT-ARRTE-------------------ALDDLVAAY-PDRAEAISLDVTDGERIDVVAADVLA 75 (281)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSGG-------------------GGHHHHHHC-TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHhc-cCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 4889999988889988754 33221 112222211 01122356799999999998887766
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+|+-..|.
T Consensus 76 ~~g~id~lv~~Ag~ 89 (281)
T 3m1a_A 76 RYGRVDVLVNNAGR 89 (281)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hCCCCCEEEECCCc
Confidence 4 78899988884
No 455
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=49.33 E-value=62 Score=25.38 Aligned_cols=40 Identities=10% Similarity=0.130 Sum_probs=24.2
Q ss_pred hhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcCC
Q 028115 51 ASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTG 91 (213)
Q Consensus 51 ~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG 91 (213)
..+....+|.+++--+.+. ..+.++.+.+.|+|+|.--..
T Consensus 52 ~~l~~~~vdgiIi~~~~~~-~~~~~~~~~~~~iPvV~~~~~ 91 (272)
T 3o74_A 52 QLFRARRCDALFVASCLPP-EDDSYRELQDKGLPVIAIDRR 91 (272)
T ss_dssp HHHHHTTCSEEEECCCCCS-SCCHHHHHHHTTCCEEEESSC
T ss_pred HHHHHcCCCEEEEecCccc-cHHHHHHHHHcCCCEEEEccC
Confidence 3333457884444322322 356777888999999875443
No 456
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=49.31 E-value=54 Score=26.70 Aligned_cols=88 Identities=13% Similarity=0.062 Sum_probs=50.1
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..++.. +.......... ...+.-...+.+++..+.+...... .+..|.|.++.+...++.+
T Consensus 23 IG~aia~~la~~G~~V~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 98 (286)
T 3uve_A 23 QGRSHAVRLAQEGADIIAV-DICKPIRAGVV---DTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSG 98 (286)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECCSCSBTTBC---CCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEE-ecccccccccc---ccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4899999999999988753 32211000000 0000000011223322222222233 2457999999999999988
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|-..|.
T Consensus 99 ~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 99 VEQLGRLDIIVANAGI 114 (286)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCcc
Confidence 775 78899988884
No 457
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=49.25 E-value=45 Score=26.09 Aligned_cols=70 Identities=11% Similarity=0.070 Sum_probs=45.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.++|.+++.. ++.+ +.+++..+++. ....+..|++.++.+.+.++.+.+
T Consensus 17 iG~~~a~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~ 74 (234)
T 2ehd_A 17 IGEATARLLHAKGYRVGLM-ARDE-------------------KRLQALAAELE--GALPLPGDVREEGDWARAVAAMEE 74 (234)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHST--TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCH-------------------HHHHHHHHHhh--hceEEEecCCCHHHHHHHHHHHHH
Confidence 4888999888888887753 3221 11122222211 223356799999999998887765
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+||-..|.
T Consensus 75 ~~~~id~li~~Ag~ 88 (234)
T 2ehd_A 75 AFGELSALVNNAGV 88 (234)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 3 78899988874
No 458
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=49.17 E-value=52 Score=25.87 Aligned_cols=39 Identities=8% Similarity=0.249 Sum_probs=27.1
Q ss_pred hhhcCC-CCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcC
Q 028115 52 SVFDKY-PNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 52 ~~~~~~-~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTT 90 (213)
.+.... +|.+++--..++...+.++.+.+.++|+|.--+
T Consensus 53 ~l~~~~~vdgii~~~~~~~~~~~~~~~~~~~~ipvV~~~~ 92 (276)
T 3ksm_A 53 YHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVDS 92 (276)
T ss_dssp HHHHHSCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHhCCCCEEEEeCCCHHHHHHHHHHHHHCCCcEEEEec
Confidence 333346 895555444456778889999999999987543
No 459
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=49.16 E-value=76 Score=24.08 Aligned_cols=76 Identities=16% Similarity=0.181 Sum_probs=41.1
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh---------HHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP---------AAV 71 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p---------~~~ 71 (213)
+|+.+++.+.++|.++++. ++.+...... . .+..+...+..|.+. +.+ ..+| +||....+ ..+
T Consensus 12 iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~-~-~~~~~~~~D~~d~~~--~~~--~~~d-~vi~~ag~~~~~~~~~~~~~ 83 (221)
T 3ew7_A 12 AGSRILEEAKNRGHEVTAI-VRNAGKITQT-H-KDINILQKDIFDLTL--SDL--SDQN-VVVDAYGISPDEAEKHVTSL 83 (221)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCSHHHHHH-C-SSSEEEECCGGGCCH--HHH--TTCS-EEEECCCSSTTTTTSHHHHH
T ss_pred hHHHHHHHHHhCCCEEEEE-EcCchhhhhc-c-CCCeEEeccccChhh--hhh--cCCC-EEEECCcCCccccchHHHHH
Confidence 4899999998889998865 4333211100 0 111111111112222 112 3678 78887644 456
Q ss_pred HHHHHHHHhcCCC
Q 028115 72 NGNAELYSKVGVP 84 (213)
Q Consensus 72 ~~~~~~~~~~g~~ 84 (213)
...++.|.+.+.+
T Consensus 84 ~~l~~a~~~~~~~ 96 (221)
T 3ew7_A 84 DHLISVLNGTVSP 96 (221)
T ss_dssp HHHHHHHCSCCSS
T ss_pred HHHHHHHHhcCCc
Confidence 7778888887654
No 460
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=48.86 E-value=45 Score=27.70 Aligned_cols=72 Identities=13% Similarity=0.160 Sum_probs=44.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcC-----CCCEEEEEcCChHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK-----YPNMIVVDYTVPAAVNGNA 75 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~-----~~d~VvIDFS~p~~~~~~~ 75 (213)
+|+.+++.+.+.|..|+.. ++... .+++..+++... ....+..|++.++.+...+
T Consensus 38 IG~aia~~L~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 97 (297)
T 1xhl_A 38 IGRSAAVIFAKEGAQVTIT-GRNED-------------------RLEETKQQILKAGVPAEKINAVVADVTEASGQDDII 97 (297)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHH
Confidence 4888888888888887653 33221 111111221111 1122567999999999998
Q ss_pred HHHHhc--CCCEEEEcCCC
Q 028115 76 ELYSKV--GVPFVMGTTGG 92 (213)
Q Consensus 76 ~~~~~~--g~~~ViGTTG~ 92 (213)
+.+.+. ++.+||-..|.
T Consensus 98 ~~~~~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 98 NTTLAKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHhcCCCCEEEECCCc
Confidence 877664 68889887774
No 461
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=48.81 E-value=20 Score=31.83 Aligned_cols=75 Identities=19% Similarity=0.192 Sum_probs=48.9
Q ss_pred EEEE--cCChHHHHHHHHHHHhcCCCEEE--EcCCCCH-------HHHHHHHHcc-CCcEEEccChhHHHHHHHHHHHHH
Q 028115 61 IVVD--YTVPAAVNGNAELYSKVGVPFVM--GTTGGDR-------VRLHETIENS-NVYAVISPQMGKQVVAFLAAMEIM 128 (213)
Q Consensus 61 VvID--FS~p~~~~~~~~~~~~~g~~~Vi--GTTG~~~-------~~~~~~~~~~-~~~~v~a~N~SlGv~ll~~l~~~a 128 (213)
|++- .++.+-+...++++.+.|.++++ ||++|.. ..+..+++.. +.||.+| -=+.|..+ ..|
T Consensus 151 viLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~s-dHt~G~~~-----~~A 224 (349)
T 2wqp_A 151 IILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLS-DHTLDNYA-----CLG 224 (349)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEE-CCSSSSHH-----HHH
T ss_pred EEEECCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeC-CCCCcHHH-----HHH
Confidence 5665 35566677778888888878888 8999842 3466677777 7899884 44556322 223
Q ss_pred HHhcCCCCCCCcEEEEeccC
Q 028115 129 AEQFPGAFSGYSLQVLESHQ 148 (213)
Q Consensus 129 a~~l~~~~~~~dieI~E~HH 148 (213)
|-.++ -+ |||.|-
T Consensus 225 AvAlG-----A~--iIEkH~ 237 (349)
T 2wqp_A 225 AVALG-----GS--ILERHF 237 (349)
T ss_dssp HHHHT-----CC--EEEEEB
T ss_pred HHHhC-----CC--EEEeCC
Confidence 33343 23 999994
No 462
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=48.67 E-value=48 Score=29.46 Aligned_cols=57 Identities=12% Similarity=0.162 Sum_probs=39.6
Q ss_pred CChHH-HHHHHHHHHh--cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhHHHHHHH
Q 028115 66 TVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFL 122 (213)
Q Consensus 66 S~p~~-~~~~~~~~~~--~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~SlGv~ll~ 122 (213)
+..+. ....++++.+ .++|+|+--.|-+.++-+++-+.+++|+..++++.-.+..+.
T Consensus 323 ~~~~~vA~gii~a~~~~~~~~pivvrl~G~n~~~g~~~l~~~g~~~~~~~~~~~aa~~~v 382 (388)
T 2nu8_B 323 VRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVV 382 (388)
T ss_dssp SCHHHHHHHHHHHHHHHTCCSCEEEEEESTTHHHHHHHHHTTCSSEEECSSHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhcCCCCeEEEEeCCCCHHHHHHHHHHCCCceecCCCHHHHHHHHH
Confidence 44333 4445666656 789999988887776665655567899999999887665433
No 463
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=48.51 E-value=15 Score=29.83 Aligned_cols=72 Identities=17% Similarity=0.239 Sum_probs=42.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh----------H-
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP----------A- 69 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p----------~- 69 (213)
+|+.+++.+.+.|.++++. ++... .+...+.+++++++ ..+| +||.+..+ +
T Consensus 17 iG~~l~~~L~~~g~~V~~~-~r~~~-------------D~~d~~~~~~~~~~---~~~d-~vi~~a~~~~~~~~~~~~~~ 78 (287)
T 3sc6_A 17 LGKQLQEELNPEEYDIYPF-DKKLL-------------DITNISQVQQVVQE---IRPH-IIIHCAAYTKVDQAEKERDL 78 (287)
T ss_dssp HHHHHHHHSCTTTEEEEEE-CTTTS-------------CTTCHHHHHHHHHH---HCCS-EEEECCCCCCHHHHTTCHHH
T ss_pred HHHHHHHHHHhCCCEEEEe-ccccc-------------CCCCHHHHHHHHHh---cCCC-EEEECCcccChHHHhcCHHH
Confidence 3888888887788888764 33211 11111233333332 2588 88987532 1
Q ss_pred -------HHHHHHHHHHhcCCCEEEEcC
Q 028115 70 -------AVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 70 -------~~~~~~~~~~~~g~~~ViGTT 90 (213)
.+...++.|.+.++++|.-+|
T Consensus 79 ~~~~n~~~~~~l~~~~~~~~~~~v~~SS 106 (287)
T 3sc6_A 79 AYVINAIGARNVAVASQLVGAKLVYIST 106 (287)
T ss_dssp HHHHHTHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEEch
Confidence 245688889999988765443
No 464
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=48.38 E-value=48 Score=29.73 Aligned_cols=73 Identities=14% Similarity=0.047 Sum_probs=51.5
Q ss_pred hcCCCCEEEEEcC---ChHHHHHHHHHHHhcCCCEEEEcCCCCH--HHHHHHHHccCCcEEEccChh--HHHHHHHHHHH
Q 028115 54 FDKYPNMIVVDYT---VPAAVNGNAELYSKVGVPFVMGTTGGDR--VRLHETIENSNVYAVISPQMG--KQVVAFLAAME 126 (213)
Q Consensus 54 ~~~~~d~VvIDFS---~p~~~~~~~~~~~~~g~~~ViGTTG~~~--~~~~~~~~~~~~~~v~a~N~S--lGv~ll~~l~~ 126 (213)
.+.+.| |+|-+- +-++..-....|++.|+|+|=||.=+.. ..+.++.+++++|++ ---|= .|..+|.+.+.
T Consensus 135 ~~~~~d-VvV~~lp~gs~~aS~~YA~Aal~ag~~fvN~~P~~~~~~P~~~el~~~~g~pi~-GdD~Ksq~G~T~~k~~La 212 (367)
T 1gr0_A 135 KEAKVD-VLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIASDPVWAKKFTDARVPIV-GDDIKSQVGATITHRVLA 212 (367)
T ss_dssp HHTTCS-EEEECCCTTCHHHHHHHHHHHHHHTCEEEECSSCCSTTSHHHHHHHHHHTCEEE-ESSBCCSSCHHHHHHHHH
T ss_pred HHhCCc-EEEEeeeCCCcCHHHHHHHHHHHcCCceEecCCccccCCHHHHHHHHHcCCCEe-ccccccccCCChHHHHHH
Confidence 345788 888873 4455666777888899999999987654 577888887777743 33455 78878777654
Q ss_pred HH
Q 028115 127 IM 128 (213)
Q Consensus 127 ~a 128 (213)
.+
T Consensus 213 ~~ 214 (367)
T 1gr0_A 213 KL 214 (367)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 465
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=48.34 E-value=22 Score=30.62 Aligned_cols=87 Identities=16% Similarity=0.142 Sum_probs=39.8
Q ss_pred ChHHHHHHHHhCCC-eEEEEecCCCccccccccccCceeEeecC---CchhHHHhhhhcCCCCEEEEEcCC-hHHHHHHH
Q 028115 1 MGKAVIKAADAAGL-ELVPVSFGTEEESGQKVEVCGKEIQVHGL---SDRESVLASVFDKYPNMIVVDYTV-PAAVNGNA 75 (213)
Q Consensus 1 MG~~i~~~~~~~~~-elv~~~~~~~~~~g~~~~~~~~~v~i~~~---~~~~~~l~~~~~~~~d~VvIDFS~-p~~~~~~~ 75 (213)
+|+.+++.+...|. ++++ ++..+........+ |....+... .++.+.+.++....+| ++||++- ++.+...+
T Consensus 204 vG~~a~qla~~~Ga~~Vi~-~~~~~~~~~~~~~l-Ga~~vi~~~~~~~~~~~~~~~~~~~g~D-~vid~~g~~~~~~~~~ 280 (374)
T 1cdo_A 204 VGLAAVMGCHSAGAKRIIA-VDLNPDKFEKAKVF-GATDFVNPNDHSEPISQVLSKMTNGGVD-FSLECVGNVGVMRNAL 280 (374)
T ss_dssp HHHHHHHHHHHTTCSEEEE-ECSCGGGHHHHHHT-TCCEEECGGGCSSCHHHHHHHHHTSCBS-EEEECSCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEE-EcCCHHHHHHHHHh-CCceEEeccccchhHHHHHHHHhCCCCC-EEEECCCCHHHHHHHH
Confidence 47788888777787 5554 44332111000001 111111111 1233333333223467 7788875 45555555
Q ss_pred HHHHhc-CCCEEEEcC
Q 028115 76 ELYSKV-GVPFVMGTT 90 (213)
Q Consensus 76 ~~~~~~-g~~~ViGTT 90 (213)
+..... |.=+.+|..
T Consensus 281 ~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 281 ESCLKGWGVSVLVGWT 296 (374)
T ss_dssp HTBCTTTCEEEECSCC
T ss_pred HHhhcCCcEEEEEcCC
Confidence 555455 554445543
No 466
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=48.33 E-value=34 Score=28.47 Aligned_cols=48 Identities=17% Similarity=0.159 Sum_probs=33.2
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCE-EEEcCCCC
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPF-VMGTTGGD 93 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~-ViGTTG~~ 93 (213)
.+....+..+....|| +|+=+..+..+...++.+.+.|+.+ ++|+ +|.
T Consensus 193 ~d~~~~~~~l~~~~~d-ai~~~~~~~~a~~~~~~~~~~g~~vp~~~~-~~~ 241 (375)
T 4evq_A 193 VEFQSALAEIASLKPD-CVYAFFSGGGALKFIKDYAAANLGIPLWGP-GFL 241 (375)
T ss_dssp CCCHHHHHHHHHHCCS-EEEEECCTHHHHHHHHHHHHTTCCCCEEEE-GGG
T ss_pred ccHHHHHHHHHhcCCC-EEEEecCcchHHHHHHHHHHcCCCceEEec-CcC
Confidence 4566666666556899 6666677778888999999998643 3444 563
No 467
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=48.10 E-value=75 Score=25.83 Aligned_cols=72 Identities=17% Similarity=0.178 Sum_probs=44.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhh---cCCCCEEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVF---DKYPNMIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~---~~~~d~VvIDFS~p~~~~~~~~~ 77 (213)
+|+.+++.+.+.|.+++.. ++... .+++..+++. ......+..|++.++.+...++.
T Consensus 38 iG~~la~~L~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 97 (302)
T 1w6u_A 38 LGKGMTTLLSSLGAQCVIA-SRKMD-------------------VLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE 97 (302)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHH
Confidence 4888888888888887653 33221 1111111111 11122356799999999999888
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.+||-..|.
T Consensus 98 ~~~~~g~id~li~~Ag~ 114 (302)
T 1w6u_A 98 LIKVAGHPNIVINNAAG 114 (302)
T ss_dssp HHHHTCSCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 7654 57888888773
No 468
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=48.04 E-value=36 Score=27.26 Aligned_cols=50 Identities=20% Similarity=0.236 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhcCCCEEEEc--CCCCHHHHHHHHHccCCcE----EEccChhHHHH
Q 028115 70 AVNGNAELYSKVGVPFVMGT--TGGDRVRLHETIENSNVYA----VISPQMGKQVV 119 (213)
Q Consensus 70 ~~~~~~~~~~~~g~~~ViGT--TG~~~~~~~~~~~~~~~~~----v~a~N~SlGv~ 119 (213)
.+.+.++.+.+.|+++|+.| +|-+...+....+.-++.+ ++++|.+....
T Consensus 25 ~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~~~~~ 80 (264)
T 3epr_A 25 AGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDY 80 (264)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHHH
T ss_pred CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHHHHHH
Confidence 56788999999999999998 5777776655544444322 66667665443
No 469
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=48.01 E-value=36 Score=27.42 Aligned_cols=71 Identities=15% Similarity=0.124 Sum_probs=45.3
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.++|.+++.. ++... .+++..+++ ......+..|.|.++.+...++.+.+
T Consensus 17 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (254)
T 1hdc_A 17 LGAEAARQAVAAGARVVLA-DVLDE-------------------EGAATAREL-GDAARYQHLDVTIEEDWQRVVAYARE 75 (254)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHHHH
Confidence 4889999988889887753 32211 112212211 01122245799999999998887766
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+||-..|.
T Consensus 76 ~~g~iD~lv~nAg~ 89 (254)
T 1hdc_A 76 EFGSVDGLVNNAGI 89 (254)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 4 68899988774
No 470
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=48.00 E-value=46 Score=26.69 Aligned_cols=71 Identities=20% Similarity=0.249 Sum_probs=46.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHh
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (213)
+|+.+++.+.+.|..++. +++.. +.+++..+++ ......+..|.|.++.+...++.+.+
T Consensus 18 IG~a~a~~l~~~G~~V~~-~~r~~-------------------~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 76 (247)
T 3rwb_A 18 IGKAIAARLAADGATVIV-SDINA-------------------EGAKAAAASI-GKKARAIAADISDPGSVKALFAEIQA 76 (247)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECSCH-------------------HHHHHHHHHH-CTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCH-------------------HHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 488999998888988774 23222 1122222222 11112245799999999999988877
Q ss_pred c--CCCEEEEcCCC
Q 028115 81 V--GVPFVMGTTGG 92 (213)
Q Consensus 81 ~--g~~~ViGTTG~ 92 (213)
. ++.+||-..|.
T Consensus 77 ~~g~id~lv~nAg~ 90 (247)
T 3rwb_A 77 LTGGIDILVNNASI 90 (247)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HCCCCCEEEECCCC
Confidence 5 78899988884
No 471
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=47.97 E-value=32 Score=26.37 Aligned_cols=31 Identities=23% Similarity=0.161 Sum_probs=14.8
Q ss_pred EEEEcCChHHHHHHHHHHHhcCCCEEEEcCC
Q 028115 61 IVVDYTVPAAVNGNAELYSKVGVPFVMGTTG 91 (213)
Q Consensus 61 VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG 91 (213)
.++|.+.++......+.....++.+|+-++|
T Consensus 86 ~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 86 YVGDSRSVDFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp EEEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred EEeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence 4556665544333333222234556665555
No 472
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=47.93 E-value=12 Score=32.31 Aligned_cols=86 Identities=14% Similarity=0.168 Sum_probs=41.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEe-ecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQV-HGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i-~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (213)
+|+.+++.+...|.++++. ++.+........+ |....+ +...+..+.+.+.....+| ++||.+....+...++.+.
T Consensus 176 iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~~~-Ga~~~~~~~~~~~~~~~~~~~~~g~D-~vid~~g~~~~~~~~~~l~ 252 (362)
T 2c0c_A 176 TGQFAMQLSKKAKCHVIGT-CSSDEKSAFLKSL-GCDRPINYKTEPVGTVLKQEYPEGVD-VVYESVGGAMFDLAVDALA 252 (362)
T ss_dssp THHHHHHHHHHTTCEEEEE-ESSHHHHHHHHHT-TCSEEEETTTSCHHHHHHHHCTTCEE-EEEECSCTHHHHHHHHHEE
T ss_pred HHHHHHHHHHhCCCEEEEE-ECCHHHHHHHHHc-CCcEEEecCChhHHHHHHHhcCCCCC-EEEECCCHHHHHHHHHHHh
Confidence 5788888888778876653 3322110000011 111111 1112333333332222356 7888877766666666655
Q ss_pred hcCCCEEEEc
Q 028115 80 KVGVPFVMGT 89 (213)
Q Consensus 80 ~~g~~~ViGT 89 (213)
..|.=+.+|.
T Consensus 253 ~~G~iv~~g~ 262 (362)
T 2c0c_A 253 TKGRLIVIGF 262 (362)
T ss_dssp EEEEEEECCC
T ss_pred cCCEEEEEeC
Confidence 5665445554
No 473
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=47.75 E-value=55 Score=27.14 Aligned_cols=72 Identities=17% Similarity=0.075 Sum_probs=44.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcC--CCCEEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK--YPNMIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~--~~d~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|.+|+.. ++.+. .+++..+++... ....+..|.|.++.+...++.+
T Consensus 46 IG~aia~~L~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 105 (291)
T 3cxt_A 46 IGFAIASAYAKAGATIVFN-DINQE-------------------LVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQI 105 (291)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSHH-------------------HHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 4788888888888887643 32211 111212222111 2223567999999999988877
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 106 ~~~~g~iD~lvnnAg~ 121 (291)
T 3cxt_A 106 ESEVGIIDILVNNAGI 121 (291)
T ss_dssp HHHTCCCCEEEECCCC
T ss_pred HHHcCCCcEEEECCCc
Confidence 653 48889987774
No 474
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=47.54 E-value=83 Score=23.26 Aligned_cols=72 Identities=17% Similarity=0.178 Sum_probs=40.8
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHh----cCCCEEEEcCCCCHHHHHHHHHccCCcEEEccChhH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~~~ViGTTG~~~~~~~~~~~~~~~~~v~a~N~Sl 116 (213)
++-.++++.+....||.|+.|..-|.. =.+.++...+ ..+|+|+-|+--+.+...+.. .++.--+++=.|+.
T Consensus 44 ~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~-~~Ga~~yl~KP~~~ 120 (134)
T 3to5_A 44 DDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAA-QAGVNGYIVKPFTA 120 (134)
T ss_dssp SSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHH-HTTCCEEEESSCCH
T ss_pred CCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHH-HCCCCEEEECCCCH
Confidence 455666666666689988999999963 2333333332 357877665544444443333 34543344444554
No 475
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=47.46 E-value=82 Score=25.43 Aligned_cols=19 Identities=26% Similarity=0.305 Sum_probs=15.6
Q ss_pred ChHHHHHHHHhCCCeEEEE
Q 028115 1 MGKAVIKAADAAGLELVPV 19 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~ 19 (213)
+|+.+++.+.+.|+++++.
T Consensus 16 iG~~l~~~L~~~g~~V~~l 34 (308)
T 1qyc_A 16 IGRHVAKASLDLGHPTFLL 34 (308)
T ss_dssp THHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhCCCCEEEE
Confidence 5899999998888888753
No 476
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=47.44 E-value=16 Score=27.32 Aligned_cols=39 Identities=10% Similarity=-0.020 Sum_probs=30.4
Q ss_pred HHHh-cCCCEEEEcCCCC-HHHHHHHHHccCCcEEEccChh
Q 028115 77 LYSK-VGVPFVMGTTGGD-RVRLHETIENSNVYAVISPQMG 115 (213)
Q Consensus 77 ~~~~-~g~~~ViGTTG~~-~~~~~~~~~~~~~~~v~a~N~S 115 (213)
.+.+ .++|.||=|-|+. .+++.+++++.++|++.++--+
T Consensus 68 ~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ipvl~t~~~T 108 (139)
T 2ioj_A 68 TALEMPNVRCLILTGNLEPVQLVLTKAEERGVPVILTGHDT 108 (139)
T ss_dssp HHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCCEEECSSCH
T ss_pred HHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCeEEEECCCH
Confidence 5566 7899999999987 3567778888889999887543
No 477
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=47.43 E-value=54 Score=26.52 Aligned_cols=84 Identities=14% Similarity=0.035 Sum_probs=48.5
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+.+++.+.+.|..++.. ++........ .......++++...++...... .+..|+|.++.+.+.++.+
T Consensus 22 IG~~ia~~l~~~G~~V~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 93 (287)
T 3pxx_A 22 QGRSHAVKLAEEGADIILF-DICHDIETNE-------YPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANA 93 (287)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECCSCCTTSC-------SCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEE-cccccccccc-------cchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 4899999998899987753 3221000000 0000011222222222212223 2567999999999999887
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.+||-..|.
T Consensus 94 ~~~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 94 VAEFGKLDVVVANAGI 109 (287)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 765 78899988875
No 478
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=47.41 E-value=24 Score=25.32 Aligned_cols=58 Identities=17% Similarity=0.233 Sum_probs=41.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHcc---CCc--EEEccCh
Q 028115 57 YPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENS---NVY--AVISPQM 114 (213)
Q Consensus 57 ~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~~~~~~---~~~--~v~a~N~ 114 (213)
+|.--+---|+...+.+.++-...+|+|+|+=..|-+..+..++..++ ++. ++.|..-
T Consensus 26 ypgryirtatssqdirdiiksmkdngkplvvfvngasqndvnefqneakkegvsydvlkstdp 88 (112)
T 2lnd_A 26 YPGRYIRTATSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDP 88 (112)
T ss_dssp SCTTTEEEECSHHHHHHHHHHHTTCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCH
T ss_pred CCCceeeeccchhhHHHHHHHHHhcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCH
Confidence 444124566778889999999999999999999999987766664443 333 4556553
No 479
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=47.35 E-value=82 Score=25.72 Aligned_cols=83 Identities=18% Similarity=0.115 Sum_probs=42.0
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCC-c----cccccc-c--ccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh---H
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTE-E----ESGQKV-E--VCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP---A 69 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~-~----~~g~~~-~--~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p---~ 69 (213)
+|+.+++.+.+.|+++.+. .+.+ . ..-+.+ . ..+..+...+..|.+.. .+.. ..+| +||....+ .
T Consensus 16 iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l-~~a~-~~~d-~vi~~a~~~~~~ 91 (321)
T 3c1o_A 16 IGKFMVRASLSFSHPTFIY-ARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKM-VSVL-KQVD-IVISALPFPMIS 91 (321)
T ss_dssp THHHHHHHHHHTTCCEEEE-ECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHH-HHHH-TTCS-EEEECCCGGGSG
T ss_pred hHHHHHHHHHhCCCcEEEE-ECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHH-HHHH-cCCC-EEEECCCccchh
Confidence 5899999998888888764 3332 0 000000 0 01111111112233332 2222 2467 67776653 4
Q ss_pred HHHHHHHHHHhcC-CCEEE
Q 028115 70 AVNGNAELYSKVG-VPFVM 87 (213)
Q Consensus 70 ~~~~~~~~~~~~g-~~~Vi 87 (213)
.....++.|.+.| ++-+|
T Consensus 92 ~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 92 SQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp GGHHHHHHHHHHCCCCEEE
T ss_pred hHHHHHHHHHHhCCccEEe
Confidence 5566777777777 65554
No 480
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=47.31 E-value=36 Score=30.33 Aligned_cols=122 Identities=13% Similarity=0.130 Sum_probs=74.2
Q ss_pred CCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcCCCCHH--------------------HHHHHHH
Q 028115 43 LSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRV--------------------RLHETIE 102 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTTG~~~~--------------------~~~~~~~ 102 (213)
.++..+.|+...+..+-+-.+.+.+-+.+...++.|.+.+.|+++.++-.... ..+.+++
T Consensus 17 ~~~~~~ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~ga~~~a~~v~~~A~ 96 (357)
T 3qm3_A 17 GDELNKIYDYAKAEGFAIPAVNVVGTDSINAVLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAK 96 (357)
T ss_dssp GGGHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHHTSCEEEEECHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccCccchhhHHHHHHHHHHHHHHHHH
Confidence 35666666655545555458999999999999999999999999987621100 1345566
Q ss_pred ccCCcEEE----ccChhHHHHHHHHHH----HHHHHhcCCCCCCCcEEEEeccCCCCCCc-hHHHHHHHHHHHhcCC
Q 028115 103 NSNVYAVI----SPQMGKQVVAFLAAM----EIMAEQFPGAFSGYSLQVLESHQAGKLDT-SGTAKAVISCFQKLGV 170 (213)
Q Consensus 103 ~~~~~~v~----a~N~SlGv~ll~~l~----~~aa~~l~~~~~~~dieI~E~HH~~K~Da-SGTA~~la~~~~~~~~ 170 (213)
.+++||++ +.++.+. .+..++ +...+.+. .+|+-=.+..-|- -.+. --...++.+.+...|+
T Consensus 97 ~~~VPVaLHlDHg~~~~~~--~i~~~i~a~~~~~~~~~~---~GFtSVMiDgS~l-p~eENI~~Tk~vv~~ah~~gv 167 (357)
T 3qm3_A 97 AYGVPVILHTDHAARKLLP--WIDGLIEANAQYKKTHGQ---ALFSSHMLDLSEE-SLEENLSTCEVYLQKLDALGV 167 (357)
T ss_dssp HHTCEEEEEECCCCGGGHH--HHHHHHHHHHHHHHHHSS---CSCSEEECCCTTS-CHHHHHHHHHHHHHHHHHHTC
T ss_pred HCCCcEEEECCCCCccchH--HHHHHHHHhHHHHhhhcC---CCCCEEEEeCCCC-CHHHHHHHHHHHHHHHHHcCC
Confidence 77899876 5565432 122222 22333333 4677666666553 2233 4455566665555443
No 481
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=47.30 E-value=38 Score=27.50 Aligned_cols=72 Identities=18% Similarity=0.212 Sum_probs=46.2
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhc-CCCC--EEEEEcCChHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFD-KYPN--MIVVDYTVPAAVNGNAEL 77 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~-~~~d--~VvIDFS~p~~~~~~~~~ 77 (213)
+|+++++.+.+.|..|+.. ++... .+++..+++.. ...+ .+..|.|.++.+...++.
T Consensus 32 IG~aia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 91 (266)
T 4egf_A 32 IGADIARAFAAAGARLVLS-GRDVS-------------------ELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARR 91 (266)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 4888998888888887643 33221 11222222111 1122 356799999999999988
Q ss_pred HHhc--CCCEEEEcCCC
Q 028115 78 YSKV--GVPFVMGTTGG 92 (213)
Q Consensus 78 ~~~~--g~~~ViGTTG~ 92 (213)
+.+. ++.++|-..|.
T Consensus 92 ~~~~~g~id~lv~nAg~ 108 (266)
T 4egf_A 92 AAEAFGGLDVLVNNAGI 108 (266)
T ss_dssp HHHHHTSCSEEEEECCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 7775 78899988774
No 482
>1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=47.23 E-value=64 Score=28.12 Aligned_cols=56 Identities=20% Similarity=0.201 Sum_probs=33.8
Q ss_pred CchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc----CCCEEEEcCCCCHHHHHH
Q 028115 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGDRVRLHE 99 (213)
Q Consensus 44 ~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~~~ViGTTG~~~~~~~~ 99 (213)
.+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+-|.--+.+...+
T Consensus 32 ~~~~~al~~~~~~~~dlvllD~~mp~~~G~~~~~~l~~~~~~~~~pii~lt~~~~~~~~~~ 92 (459)
T 1w25_A 32 MDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQ 92 (459)
T ss_dssp SSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECSSCHHHHHH
T ss_pred CCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHhcCcccCCCCEEEEECCCCHHHHHH
Confidence 455555555544579988999999962 34555555542 467777655444444333
No 483
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=47.10 E-value=64 Score=28.40 Aligned_cols=81 Identities=19% Similarity=0.151 Sum_probs=47.5
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCC-C---------------ccc------cccccccCceeEeecCCchhHHHhhhhcCC
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGT-E---------------EES------GQKVEVCGKEIQVHGLSDRESVLASVFDKY 57 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~-~---------------~~~------g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~ 57 (213)
+||.+.|++. ..++++|+.-|.. . +.. |..+.+.|..+.++...|+++. ...+..
T Consensus 12 IGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~dp~~i--~w~~~g 89 (332)
T 3pym_A 12 IGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIATYQERDPANL--PWGSSN 89 (332)
T ss_dssp HHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGS--CTTTTT
T ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEEeecccccC--CccccC
Confidence 4889999887 5679999876531 1 111 1122344556777544455431 112236
Q ss_pred CCEEEEEcCChHHHHHHHHHHHhcCCC
Q 028115 58 PNMIVVDYTVPAAVNGNAELYSKVGVP 84 (213)
Q Consensus 58 ~d~VvIDFS~p~~~~~~~~~~~~~g~~ 84 (213)
.| ++++-|-.....+.....++.|..
T Consensus 90 vD-iVlesTG~f~s~e~a~~hl~aGAk 115 (332)
T 3pym_A 90 VD-IAIDSTGVFKELDTAQKHIDAGAK 115 (332)
T ss_dssp CS-EEEECSSSSCSHHHHHHHHHTTCS
T ss_pred cc-EEEEecccccCHHHHHHHHHcCCC
Confidence 78 788866555566666666777765
No 484
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=46.95 E-value=1.5e+02 Score=26.13 Aligned_cols=80 Identities=16% Similarity=0.130 Sum_probs=47.2
Q ss_pred hHHHHH-HHHh-C--CCeEEEEecCCCccccccc-cccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHHH
Q 028115 2 GKAVIK-AADA-A--GLELVPVSFGTEEESGQKV-EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 2 G~~i~~-~~~~-~--~~elv~~~~~~~~~~g~~~-~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (213)
|+++++ .+.+ + ..+++....++ .|+.+ .+.+..+.+....+.+. + ...| +++.-+-.....+.+.
T Consensus 13 G~ellr~lL~~hp~~~~~l~~~ss~~---aG~~~~~~~~~~~~~~~~~~~~~-~-----~~~D-vvf~a~~~~~s~~~~~ 82 (370)
T 3pzr_A 13 GSVLMQRMVEERDFDLIEPVFFSTSQ---IGVPAPNFGKDAGMLHDAFDIES-L-----KQLD-AVITCQGGSYTEKVYP 82 (370)
T ss_dssp HHHHHHHHHHTTGGGGSEEEEEESSS---TTSBCCCSSSCCCBCEETTCHHH-H-----TTCS-EEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEEEEeccc---cCcCHHHhCCCceEEEecCChhH-h-----ccCC-EEEECCChHHHHHHHH
Confidence 889998 7764 3 46877654322 45554 33333233332222222 2 3578 6676666666788999
Q ss_pred HHHhcCC-CEEEEcCC
Q 028115 77 LYSKVGV-PFVMGTTG 91 (213)
Q Consensus 77 ~~~~~g~-~~ViGTTG 91 (213)
.+.+.|+ .+||=.++
T Consensus 83 ~~~~~G~k~~VID~ss 98 (370)
T 3pzr_A 83 ALRQAGWKGYWIDAAS 98 (370)
T ss_dssp HHHHTTCCCEEEECSS
T ss_pred HHHHCCCCEEEEeCCc
Confidence 9999997 35665554
No 485
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=46.92 E-value=61 Score=27.00 Aligned_cols=58 Identities=19% Similarity=0.256 Sum_probs=35.9
Q ss_pred eeEeecCCchhHHHhhhhcCCCCEEEEEcCChHH-HHHHHHHHHhc----CCCEEEEcCCCCHH
Q 028115 37 EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGDRV 95 (213)
Q Consensus 37 ~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~~~ViGTTG~~~~ 95 (213)
++.+....+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+ .||+...
T Consensus 43 ~~~v~~~~~~~~al~~~~~~~~dlvl~D~~mp~~~G~~~~~~l~~~~~~~~~~ii~-~s~~~~~ 105 (358)
T 3bre_A 43 GIDFHFCSDPQQAVAVANQIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIV-LSTKEEP 105 (358)
T ss_dssp TEEEEEECCHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHTTSTTTTTSCEEE-EESSCCH
T ss_pred CcEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHhcCcccCCCcEEE-EeCCCCH
Confidence 3444444677777766655679988999999862 34555555442 466665 4566543
No 486
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=46.86 E-value=57 Score=26.63 Aligned_cols=70 Identities=11% Similarity=0.051 Sum_probs=39.9
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCCh------------
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP------------ 68 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p------------ 68 (213)
.|+.+++.+.+.|.++++. .+... ..+...+++++++++ ..+| +||.+..+
T Consensus 15 iG~~l~~~L~~~g~~v~~~-~r~~~------------~D~~d~~~~~~~~~~---~~~d-~vih~a~~~~~~~~~~~~~~ 77 (321)
T 1e6u_A 15 VGSAIRRQLEQRGDVELVL-RTRDE------------LNLLDSRAVHDFFAS---ERID-QVYLAAAKVGGIVANNTYPA 77 (321)
T ss_dssp HHHHHHHHHTTCTTEEEEC-CCTTT------------CCTTCHHHHHHHHHH---HCCS-EEEECCCCCCCHHHHHHCHH
T ss_pred HHHHHHHHHHhCCCeEEEE-ecCcc------------CCccCHHHHHHHHHh---cCCC-EEEEcCeecCCcchhhhCHH
Confidence 3889999888889887753 32210 111111223333322 2688 78887542
Q ss_pred -------HHHHHHHHHHHhcCCCEEE
Q 028115 69 -------AAVNGNAELYSKVGVPFVM 87 (213)
Q Consensus 69 -------~~~~~~~~~~~~~g~~~Vi 87 (213)
..+...++.|.+.+++-+|
T Consensus 78 ~~~~~n~~~~~~l~~~~~~~~~~~~v 103 (321)
T 1e6u_A 78 DFIYQNMMIESNIIHAAHQNDVNKLL 103 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 2345667888888874433
No 487
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=46.85 E-value=41 Score=28.26 Aligned_cols=18 Identities=22% Similarity=0.370 Sum_probs=12.1
Q ss_pred ChHHHHHHHHhCCCeEEE
Q 028115 1 MGKAVIKAADAAGLELVP 18 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~ 18 (213)
+|+.+++.+...|.++++
T Consensus 158 iG~~~~~~a~~~G~~Vi~ 175 (333)
T 1wly_A 158 MGHIMVPWARHLGATVIG 175 (333)
T ss_dssp THHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHCCCEEEE
Confidence 467777777766776654
No 488
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=46.82 E-value=59 Score=27.26 Aligned_cols=64 Identities=16% Similarity=0.114 Sum_probs=35.6
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCChHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA 75 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~p~~~~~~~ 75 (213)
||+.+++.+.+.|+++.. +++.+..... + ...++.. ..+++++++ .+|+|++=-..|..+.+.+
T Consensus 32 mG~~~A~~l~~~G~~V~~-~dr~~~~~~~-l--~~~g~~~--~~~~~~~~~-----~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 32 MGKAMSMNLLKNGFKVTV-WNRTLSKCDE-L--VEHGASV--CESPAEVIK-----KCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECSSGGGGHH-H--HHTTCEE--CSSHHHHHH-----HCSEEEECCSSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEE-EeCCHHHHHH-H--HHCCCeE--cCCHHHHHH-----hCCEEEEEcCCHHHHHHHH
Confidence 899999998888998774 5655432111 1 1112333 245555543 3673344333566666655
No 489
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=46.81 E-value=64 Score=27.21 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=34.3
Q ss_pred chhHHHhh--hhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCE-EEEcCCC
Q 028115 45 DRESVLAS--VFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPF-VMGTTGG 92 (213)
Q Consensus 45 ~~~~~l~~--~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~-ViGTTG~ 92 (213)
|....+.. +....|| +|+=+..+..+...++.+.+.|+.. ++|+.++
T Consensus 185 d~~~~~~~~~l~~~~~d-av~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 234 (391)
T 3eaf_A 185 EADAERIAREMLAADPD-YVWCGNTISSCSLLGRAMAKVGLDAFLLTNVWG 234 (391)
T ss_dssp HHHHHHHHHHHHTTCCS-EEEECSCHHHHHHHHHHHHHHTCCCEEEECGGG
T ss_pred CHHHHHHHHHHHHcCCC-EEEEecCcHHHHHHHHHHHHCCCCceEEEeccC
Confidence 56666666 6667899 6777888788888999999988643 4555444
No 490
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=46.78 E-value=41 Score=27.29 Aligned_cols=72 Identities=19% Similarity=0.135 Sum_probs=43.8
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCC--C--CEEEEEcCChHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY--P--NMIVVDYTVPAAVNGNAE 76 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~--~--d~VvIDFS~p~~~~~~~~ 76 (213)
+|+.+++.+.+.|.+|+.. ++.+. .+++..+++.... . ..+..|++.++.+...++
T Consensus 44 IG~~la~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 103 (279)
T 1xg5_A 44 IGAAVARALVQQGLKVVGC-ARTVG-------------------NIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFS 103 (279)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECChH-------------------HHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHH
Confidence 4788888888888887643 33211 1111111111111 1 124569999999998888
Q ss_pred HHHhc--CCCEEEEcCCC
Q 028115 77 LYSKV--GVPFVMGTTGG 92 (213)
Q Consensus 77 ~~~~~--g~~~ViGTTG~ 92 (213)
.+.+. ++.+||-..|.
T Consensus 104 ~~~~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 104 AIRSQHSGVDICINNAGL 121 (279)
T ss_dssp HHHHHHCCCSEEEECCCC
T ss_pred HHHHhCCCCCEEEECCCC
Confidence 66553 68899988884
No 491
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=46.78 E-value=50 Score=29.23 Aligned_cols=81 Identities=21% Similarity=0.227 Sum_probs=46.0
Q ss_pred ChHHHHHHHH-hCCCeEEEEecCC---------------Cccc------cccccccCceeEeecCCchhHHHhhhhcCCC
Q 028115 1 MGKAVIKAAD-AAGLELVPVSFGT---------------EEES------GQKVEVCGKEIQVHGLSDRESVLASVFDKYP 58 (213)
Q Consensus 1 MG~~i~~~~~-~~~~elv~~~~~~---------------~~~~------g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~ 58 (213)
+||.+.|++. ..++++|+.-|-. .+.. |..+.+.|..+.++...|++.. ...+...
T Consensus 15 IGr~v~R~~~~~~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~dp~~i--~w~~~gv 92 (338)
T 3lvf_P 15 IGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDASKL--PWKDLNI 92 (338)
T ss_dssp HHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSCGGGS--CTTTTTC
T ss_pred HHHHHHHHHHHCCCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEEcCCEEEECCEEEEEEEecccccC--CccccCC
Confidence 4889999887 5679999875511 1111 1122344556677544444441 1122357
Q ss_pred CEEEEEcCChHHHHHHHHHHHhcCCC
Q 028115 59 NMIVVDYTVPAAVNGNAELYSKVGVP 84 (213)
Q Consensus 59 d~VvIDFS~p~~~~~~~~~~~~~g~~ 84 (213)
| ++++-|-.....+.....++.|..
T Consensus 93 D-iVlesTG~f~s~e~a~~hl~aGAk 117 (338)
T 3lvf_P 93 D-VVLECTGFYTDKDKAQAHIEAGAK 117 (338)
T ss_dssp S-EEEECSSSCCBHHHHHHHHHTTCS
T ss_pred C-EEEEccCCcCCHHHHHHHHHcCCC
Confidence 7 788855555555666666667764
No 492
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=46.59 E-value=38 Score=27.81 Aligned_cols=32 Identities=28% Similarity=0.226 Sum_probs=21.3
Q ss_pred CCCEEEEEcCC-hHHHHHHHHHHHhcCCCEEEEc
Q 028115 57 YPNMIVVDYTV-PAAVNGNAELYSKVGVPFVMGT 89 (213)
Q Consensus 57 ~~d~VvIDFS~-p~~~~~~~~~~~~~g~~~ViGT 89 (213)
.+| +|||-+. +++-....+.|.+.++|+|.|.
T Consensus 121 ~~D-vVi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 121 EHD-LVLDCTDNVAVRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp TSS-EEEECCSSHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCC-EEEEeCCCHHHHHHHHHHHHHcCCCEEEee
Confidence 567 6777664 4444556667777888888764
No 493
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=46.51 E-value=52 Score=27.37 Aligned_cols=34 Identities=9% Similarity=0.165 Sum_probs=24.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEcC
Q 028115 56 KYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (213)
Q Consensus 56 ~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGTT 90 (213)
..+|.+|| ........+.++.+.+.|+|+|.--+
T Consensus 61 ~~vDgiIi-~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (350)
T 3h75_A 61 DKPDYLML-VNEQYVAPQILRLSQGSGIKLFIVNS 94 (350)
T ss_dssp SCCSEEEE-ECCSSHHHHHHHHHTTSCCEEEEEES
T ss_pred CCCCEEEE-eCchhhHHHHHHHHHhCCCcEEEEcC
Confidence 37894444 44455678889999999999987543
No 494
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=46.41 E-value=77 Score=26.16 Aligned_cols=68 Identities=15% Similarity=0.114 Sum_probs=45.7
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCC--EEEEEcCChHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (213)
+|+++++.+.+.|..|+.. +...+ ..+ ++.+..++ .+..|.|.++.+...++.+
T Consensus 14 IG~aia~~la~~Ga~V~~~-~~~~~-------------------~~~----~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~ 69 (247)
T 3ged_A 14 IGKQICLDFLEAGDKVCFI-DIDEK-------------------RSA----DFAKERPNLFYFHGDVADPLTLKKFVEYA 69 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHH----HHHTTCTTEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHH----HHHHhcCCEEEEEecCCCHHHHHHHHHHH
Confidence 5899999999999988743 32210 111 11222333 2567999999999999998
Q ss_pred Hhc--CCCEEEEcCCC
Q 028115 79 SKV--GVPFVMGTTGG 92 (213)
Q Consensus 79 ~~~--g~~~ViGTTG~ 92 (213)
.+. ++.++|--.|.
T Consensus 70 ~~~~g~iDiLVNNAG~ 85 (247)
T 3ged_A 70 MEKLQRIDVLVNNACR 85 (247)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 875 67888866663
No 495
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=46.39 E-value=53 Score=26.67 Aligned_cols=100 Identities=17% Similarity=0.062 Sum_probs=48.4
Q ss_pred ChHHHHHHHHhCCCeEEEEecCCCccccccccccCceeEeecCCchhHHHhhhhcCCCCEEEEEcCC-hHHHHHHHHHHH
Q 028115 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTV-PAAVNGNAELYS 79 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~~~~~~~~~g~~~~~~~~~v~i~~~~~~~~~l~~~~~~~~d~VvIDFS~-p~~~~~~~~~~~ 79 (213)
||+.+++.+.. |+++. ++++.+..... + ...++... . +++++ ..+| +||-.+. |..+...++...
T Consensus 12 ~G~~~a~~l~~-g~~V~-~~~~~~~~~~~-~--~~~g~~~~--~-~~~~~-----~~~D-~vi~~v~~~~~~~~v~~~l~ 77 (289)
T 2cvz_A 12 MGYPMAGHLAR-RFPTL-VWNRTFEKALR-H--QEEFGSEA--V-PLERV-----AEAR-VIFTCLPTTREVYEVAEALY 77 (289)
T ss_dssp THHHHHHHHHT-TSCEE-EECSSTHHHHH-H--HHHHCCEE--C-CGGGG-----GGCS-EEEECCSSHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC-CCeEE-EEeCCHHHHHH-H--HHCCCccc--C-HHHHH-----hCCC-EEEEeCCChHHHHHHHHHHH
Confidence 89999998888 99865 45654422111 1 00122222 1 22322 2578 6666655 434666554433
Q ss_pred h---cCCCEEEEcCCCC--HHHHHHHHHccCCcEEEccCh
Q 028115 80 K---VGVPFVMGTTGGD--RVRLHETIENSNVYAVISPQM 114 (213)
Q Consensus 80 ~---~g~~~ViGTTG~~--~~~~~~~~~~~~~~~v~a~N~ 114 (213)
+ .+..+|.-+|+.. .+++.+.....++.++-+|++
T Consensus 78 ~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~ 117 (289)
T 2cvz_A 78 PYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVS 117 (289)
T ss_dssp TTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEE
T ss_pred hhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEecCC
Confidence 2 3444444444432 234444433334455556654
No 496
>2afr_A Cobalamin biosynthesis precorrin isomerase; 2.30A {Leptospira interrogans} PDB: 2afv_A*
Probab=46.38 E-value=1.1e+02 Score=25.59 Aligned_cols=84 Identities=14% Similarity=0.133 Sum_probs=48.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHhc--CCCEEEEcC-CCC-H-HHHHHHHHcc-----CCcEEEc----cChhHHHHHHHH
Q 028115 58 PNMIVVDYTVPAAVNGNAELYSKV--GVPFVMGTT-GGD-R-VRLHETIENS-----NVYAVIS----PQMGKQVVAFLA 123 (213)
Q Consensus 58 ~d~VvIDFS~p~~~~~~~~~~~~~--g~~~ViGTT-G~~-~-~~~~~~~~~~-----~~~~v~a----~N~SlGv~ll~~ 123 (213)
++.|++==..|-++...++...+- +-.+|||+. ||- . +-.+.|.+.. ++|.+.. ..-.+-+.+++.
T Consensus 133 ~~aIvaIGNAPTAL~~Lleli~~g~~~PalVIG~PVGFVgAaESKe~L~~~~~~~~~~vP~I~~~GrkGGS~vAaAivNA 212 (231)
T 2afr_A 133 NESIIVIGNAPTALLEIEKLIRQEGIKPALIVGVPVGFVSAKESKESILKLEYYNVTSIPYILTMGRKGGSTIAVAILHA 212 (231)
T ss_dssp TTCEEEESSCHHHHHHHHHHHHHHCCCCSEEEECCCCSSSHHHHHHHHHHHHHTTSCCCCEEEECSSCCCHHHHHHHHHH
T ss_pred CCcEEEEeCcHHHHHHHHHHHHcCCCCCcEEEEeCCCcccHHHHHHHHHhcccccCCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 442444445788898888877653 466999986 885 2 3345565543 6997764 335666777777
Q ss_pred HHHHHHHhcCCCCCCCcEEEEeccCCC
Q 028115 124 AMEIMAEQFPGAFSGYSLQVLESHQAG 150 (213)
Q Consensus 124 l~~~aa~~l~~~~~~~dieI~E~HH~~ 150 (213)
|+..+.+. =|-.|.||.+
T Consensus 213 Ll~~~~~~---------~~~~~~~~~~ 230 (231)
T 2afr_A 213 LLLLSSKR---------GERLEHHHHH 230 (231)
T ss_dssp HHHHHHHT---------C---------
T ss_pred HHHHHHHh---------hhhhhhcccC
Confidence 77666542 2445666643
No 497
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=46.37 E-value=1.1e+02 Score=24.43 Aligned_cols=38 Identities=13% Similarity=-0.077 Sum_probs=22.9
Q ss_pred hhhcCCCCEEEEEcCChHHHHHHHHHHHhcCCCEEEEc
Q 028115 52 SVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGT 89 (213)
Q Consensus 52 ~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~~~ViGT 89 (213)
.+....+|.++|--+.++...+.++.+.+.++|+|+=-
T Consensus 54 ~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 91 (288)
T 1gud_A 54 DLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLD 91 (288)
T ss_dssp HHHTSSEEEEEECCSSSSTTHHHHHHHHHTTCEEEEES
T ss_pred HHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEEC
Confidence 33345678444433334444456778888999988643
No 498
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=46.31 E-value=81 Score=25.73 Aligned_cols=81 Identities=11% Similarity=0.059 Sum_probs=0.0
Q ss_pred CCchhHHHhhhhcCCCCEE---EEEcCChHH-----HHHHHHHHHhcCCCEEEEc--------CCCCHHHHHHHHHccC-
Q 028115 43 LSDRESVLASVFDKYPNMI---VVDYTVPAA-----VNGNAELYSKVGVPFVMGT--------TGGDRVRLHETIENSN- 105 (213)
Q Consensus 43 ~~~~~~~l~~~~~~~~d~V---vIDFS~p~~-----~~~~~~~~~~~g~~~ViGT--------TG~~~~~~~~~~~~~~- 105 (213)
....+.+++. .+|.| +.+-+.+.. +.+.++.|.++|+|+++.+ .|++...+.++++.+.
T Consensus 102 ~~~v~~a~~~----Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~ 177 (273)
T 2qjg_A 102 VTTVEEAIRM----GADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAE 177 (273)
T ss_dssp CSCHHHHHHT----TCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc----CCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHH
Q ss_pred CcE-EEccChhHHHHHHHHHHHH
Q 028115 106 VYA-VISPQMGKQVVAFLAAMEI 127 (213)
Q Consensus 106 ~~~-v~a~N~SlGv~ll~~l~~~ 127 (213)
.++ ++.-+++.|...+.++.+.
T Consensus 178 ~Gad~i~~~~~~~~~~l~~i~~~ 200 (273)
T 2qjg_A 178 LGADIVKTSYTGDIDSFRDVVKG 200 (273)
T ss_dssp TTCSEEEECCCSSHHHHHHHHHH
T ss_pred cCCCEEEECCCCCHHHHHHHHHh
No 499
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=46.30 E-value=1.2e+02 Score=24.57 Aligned_cols=19 Identities=21% Similarity=0.354 Sum_probs=15.7
Q ss_pred ChHHHHHHHHhCCCeEEEE
Q 028115 1 MGKAVIKAADAAGLELVPV 19 (213)
Q Consensus 1 MG~~i~~~~~~~~~elv~~ 19 (213)
.|+.+++.+.+.|.++++.
T Consensus 16 iG~~l~~~L~~~g~~V~~~ 34 (313)
T 1qyd_A 16 IGKRIVNASISLGHPTYVL 34 (313)
T ss_dssp THHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhCCCcEEEE
Confidence 5899999988888888764
No 500
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=46.24 E-value=52 Score=27.71 Aligned_cols=60 Identities=15% Similarity=0.097 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHhcCCC--EEEEcCC----CCHHHHHHHHHccC--CcEEE---ccChhHHHHHHHHHHHH
Q 028115 67 VPAAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHETIENSN--VYAVI---SPQMGKQVVAFLAAMEI 127 (213)
Q Consensus 67 ~p~~~~~~~~~~~~~g~~--~ViGTTG----~~~~~~~~~~~~~~--~~~v~---a~N~SlGv~ll~~l~~~ 127 (213)
..+++..++++.++. +. +|.|||| ++.+|..++.+..- +|++. +.|+.--+.+.....+.
T Consensus 17 D~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~rvpviaGvg~~~t~~ai~la~~A~~~ 87 (283)
T 2pcq_A 17 DEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRPRKPFLVGLMEETLPQAEGALLEAKAA 87 (283)
T ss_dssp CHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCCSSCCEEEECCSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHhCCcEEEeCCCCCHHHHHHHHHHHHhc
Done!