BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028116
(213 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LBA0|NIPL2_ARATH NEP1-interacting protein-like 2 OS=Arabidopsis thaliana GN=ATL24
PE=1 SV=2
Length = 223
Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/201 (61%), Positives = 158/201 (78%), Gaps = 1/201 (0%)
Query: 14 SIPKFIAGAISGTLTGLFALAGAFTGAITGALAGRASDCGVLRGAGLGAIAGAVLSVELL 73
++ + IAG SG LTG+FA+AGAFTGA+TGA+AGRA+ GVLRGA LGA+AGA+LSVE+L
Sbjct: 21 TVSRLIAGVFSGALTGIFAMAGAFTGAVTGAVAGRAAQYGVLRGAALGAVAGAILSVEVL 80
Query: 74 EASRAYWCLERTGSRGSSSMADFVEDLLRGRFIEEQFTPAILGAYHWQVRIASMSYDV-N 132
EASRAYW LE +GSRG SSMADFVE L RGR ++EQ ++ ++HWQ+RI+ +SY+
Sbjct: 81 EASRAYWYLELSGSRGPSSMADFVEQLFRGRLVDEQLMSTMINSHHWQLRISDVSYEERE 140
Query: 133 DTDCRALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFH 192
D +RGL+G+SL+KLPC+++ E+ Q + C+ICLQDI GE+ RSLP C HTFH
Sbjct: 141 DVYGELEARGLSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFH 200
Query: 193 LACVDKWLIRHGSCPVCRRDV 213
L CVDKWLIRHGSCP+CR+ V
Sbjct: 201 LVCVDKWLIRHGSCPICRQAV 221
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 170 bits (430), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 122/201 (60%), Gaps = 3/201 (1%)
Query: 14 SIPKFIAGAISGTLTGLFALAGAFTGAITGALAGRASDCGVLRGAGLGAIAGAVLSVELL 73
++ +A S T FAL G GA+TGAL G+ ++ G +RGA +GAI+GAV S+E+
Sbjct: 23 AVSALLANLFSALFTFFFALVGTLLGALTGALIGQETESGFIRGAAVGAISGAVFSIEVF 82
Query: 74 EASRAYWCLERTGSRGSSSMADFVEDLLRGRFIEEQFTPAILGAYHWQV-RIASMSYDVN 132
E+S W + +G + D + LL GR + E+ PA+L A Q+ + S D
Sbjct: 83 ESSLLLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVESQFQDHT 142
Query: 133 DTDCRALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFH 192
D A+S+GLTG+SL ++P V + + P SC S+CLQD VGE RSLPHCHH FH
Sbjct: 143 DIFDTAISKGLTGDSLNRIP-KVRITDTSPEIVSC-SVCLQDFQVGETVRSLPHCHHMFH 200
Query: 193 LACVDKWLIRHGSCPVCRRDV 213
L C+DKWL RH SCP+CRR +
Sbjct: 201 LPCIDKWLRRHASCPLCRRHL 221
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 119/199 (59%), Gaps = 12/199 (6%)
Query: 23 ISGTLTGLFALAGAFTGAITGALAGRASDCGVLRGAGLGAIAGAVLSVELLEASRAYWCL 82
IS LT FAL G GA+TGAL G+ ++ G +RGA +GAI+GAV S+E+ E+S W
Sbjct: 47 ISAILTFFFALVGTLLGALTGALIGQETESGFIRGAAIGAISGAVFSIEVFESSLDLWKS 106
Query: 83 ERTGSRGSSSMADFVEDLLRGRFIEEQFTPAILGAYHWQVRIASMSYDVNDTDCRAL--- 139
+ +G + D + LL GR + E+ PA+L A Q+ ++D D +L
Sbjct: 107 DESGFGCFLYLIDVIVSLLSGRLVRERIGPAMLSAVQSQMGAVDTAFD----DHTSLFDT 162
Query: 140 --SRGLTGESLKKLPCHVILDEIKPTQSS---CCSICLQDIIVGELARSLPHCHHTFHLA 194
S+GLTG+ ++K+P I S CS+CLQD +GE RSLPHCHH FHL
Sbjct: 163 GGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLP 222
Query: 195 CVDKWLIRHGSCPVCRRDV 213
C+D WL+RHGSCP+CRRD+
Sbjct: 223 CIDNWLLRHGSCPMCRRDI 241
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 116/198 (58%), Gaps = 10/198 (5%)
Query: 23 ISGTLTGLFALAGAFTGAITGALAGRASDCGVLRGAGLGAIAGAVLSVELLEASRAYWCL 82
+S LT FAL G GA+TGAL G+ ++ G +RGA +GAI+GAV S+E+ E+S W
Sbjct: 42 LSAVLTFFFALVGTLLGALTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWKS 101
Query: 83 ERTGSRGSSSMADFVEDLLRGRFIEEQFTPAILGAYHWQVRIASMSYD----VNDTDCRA 138
+ + D + L+ GR + E+ PA+L A Q+ +++ + DT
Sbjct: 102 NESRFGCLLYLIDVIVSLISGRLVRERIGPAMLSAVQSQMGAVDSTFEELSSIFDT---G 158
Query: 139 LSRGLTGESLKKLPCHVILDEIKPTQS---SCCSICLQDIIVGELARSLPHCHHTFHLAC 195
S+GLTG+ + K+P I + S CS+CLQD +GE RSLPHCHH FHL C
Sbjct: 159 GSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPC 218
Query: 196 VDKWLIRHGSCPVCRRDV 213
+D WL RHGSCP+CRRD+
Sbjct: 219 IDNWLFRHGSCPMCRRDL 236
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 139 LSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDK 198
+++G+ +LK +P E+K +++ C ICL D + GE R LP C+H FH+ C+D
Sbjct: 85 VAKGIKKRALKVIPVDSYSPELK-MKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDT 143
Query: 199 WLIRHGSCPVCRRDV 213
WL+ H SCP CR+ +
Sbjct: 144 WLLSHSSCPTCRQSL 158
>sp|Q9LS99|ATL77_ARATH RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2
SV=1
Length = 220
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 138 ALSRGLTGESLKKLPCHVILDEIK-PTQSSCCSICLQDIIVGELARSLPHCHHTFHLACV 196
++++G+ ++LK LP EI P C ICL D + GE R LP C+H FHL C+
Sbjct: 99 SVNKGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCI 158
Query: 197 DKWLIRHGSCPVCR 210
DKWL +H +CP CR
Sbjct: 159 DKWLTQHMTCPKCR 172
>sp|Q94BY6|ATL75_ARATH RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2
SV=1
Length = 226
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 133 DTDCRALSRGLTGESLKKLPCHVILDEIK-PTQSSCCSICLQDIIVGELARSLPHCHHTF 191
T C + ++G+ ++L+ P E+ P C ICL D + GE R LP CHH F
Sbjct: 100 STPCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGF 159
Query: 192 HLACVDKWLIRHGSCPVCR 210
H+ C+DKWL +H +CP CR
Sbjct: 160 HVRCIDKWLQQHLTCPKCR 178
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 142 GLTGESLKKLPCHVILDEIK-PTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWL 200
GL ++++ P ++ E K PT +SCC+ICL D L R LP C+H FHL C+D WL
Sbjct: 121 GLDEDTIQSYP-KILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWL 179
Query: 201 IRHGSCPVCR 210
+ +CPVCR
Sbjct: 180 RLNPTCPVCR 189
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 67.4 bits (163), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 131 VNDTDCRALSRGLTGESLKKLPC-HVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHH 189
+N++D RGLT E + L H + I CS+C+ D + G R LP C H
Sbjct: 594 LNESDDDDRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLP-CMH 652
Query: 190 TFHLACVDKWLIRHGSCPVCRRDV 213
FH+ C+D+WL + +CP+CR+ V
Sbjct: 653 EFHIHCIDRWLSENCTCPICRQPV 676
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 140 SRGLTGESLKKLPCHVILDEI--KPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVD 197
SRGL +K LP DE P + C++CL + E R LP+C HTFH+ C+D
Sbjct: 92 SRGLDPNVIKSLPVFTFSDETHKDPIE---CAVCLSEFEESETGRVLPNCQHTFHVDCID 148
Query: 198 KWLIRHGSCPVCR 210
W H +CP+CR
Sbjct: 149 MWFHSHSTCPLCR 161
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Query: 142 GLTGESLKKLPCHVILDEIKPTQSSC-----CSICLQDIIVGELARSLPHCHHTFHLACV 196
GLT L LP Q SC CSICL +++ G+ AR LP C+H+FH+ C+
Sbjct: 102 GLTSFELSSLPIVFF------RQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECI 155
Query: 197 DKWLIRHGSCPVCRRDV 213
D W H +CP+CR V
Sbjct: 156 DMWFQSHSTCPICRNTV 172
>sp|Q5R4R1|PJA2_PONAB E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2
SV=1
Length = 708
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 146 ESLKKLPCHVIL-DEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHG 204
ES+ LP ++L D Q CC IC + I ++A LP CHH FH CV WL + G
Sbjct: 611 ESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELP-CHHFFHKPCVSIWLQKSG 669
Query: 205 SCPVCRR 211
+CPVCRR
Sbjct: 670 TCPVCRR 676
>sp|O43164|PJA2_HUMAN E3 ubiquitin-protein ligase Praja-2 OS=Homo sapiens GN=PJA2 PE=1
SV=4
Length = 708
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 146 ESLKKLPCHVIL-DEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHG 204
ES+ LP ++L D Q CC IC + I ++A LP CHH FH CV WL + G
Sbjct: 611 ESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELP-CHHFFHKPCVSIWLQKSG 669
Query: 205 SCPVCRR 211
+CPVCRR
Sbjct: 670 TCPVCRR 676
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1
SV=2
Length = 707
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 146 ESLKKLPCHVIL-DEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHG 204
ES+ LP ++L D Q CC IC + I ++A LP CHH FH CV WL + G
Sbjct: 610 ESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELP-CHHFFHKPCVSIWLQKSG 668
Query: 205 SCPVCRR 211
+CPVCRR
Sbjct: 669 TCPVCRR 675
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 138 ALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVD 197
A + GL ++LK++P + I +++ C ICL D GE R LP C+H FH+ C+D
Sbjct: 84 AAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCID 143
Query: 198 KWLIRHGSCPVCRRDV 213
WL+ SCP CR+ +
Sbjct: 144 TWLLSRSSCPTCRQSL 159
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 142 GLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLI 201
GL LKK P ++ C+ICL + GE R LP C+H+FH++C+D WL+
Sbjct: 79 GLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLV 138
Query: 202 RHGSCPVCRRDV 213
H SCP CR +
Sbjct: 139 SHSSCPNCRHSL 150
>sp|Q63364|PJA2_RAT E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2
PE=2 SV=1
Length = 707
Score = 65.9 bits (159), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 146 ESLKKLPCHVIL-DEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHG 204
ES+ LP ++L D Q CC IC + I ++A LP CHH FH CV WL + G
Sbjct: 610 ESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELP-CHHFFHKPCVSIWLQKSG 668
Query: 205 SCPVCRR 211
+CPVCRR
Sbjct: 669 TCPVCRR 675
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 138 ALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVD 197
A RGLT +++LP + + ++ + C +C D V +L R LP C+H FH CVD
Sbjct: 325 AKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLP-CNHEFHAKCVD 383
Query: 198 KWLIRHGSCPVCRRD 212
KWL + +CP+CR D
Sbjct: 384 KWLKANRTCPICRAD 398
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 138 ALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVD 197
A RGLT +++LP + + ++ + C +C D V +L R LP C+H FH CVD
Sbjct: 268 AKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLP-CNHEFHAKCVD 326
Query: 198 KWLIRHGSCPVCRRD 212
KWL + +CP+CR D
Sbjct: 327 KWLKANRTCPICRAD 341
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 138 ALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVD 197
+ RGL ++++ LP + K C ICL D GE + +PHC H FH+ CVD
Sbjct: 111 SFRRGLDSQAVRSLPVYRYTKAAKQRNEDCV-ICLSDFEEGETVKVIPHCGHVFHVDCVD 169
Query: 198 KWLIRHGSCPVCRRD 212
WL + +CP+CR +
Sbjct: 170 TWLSSYVTCPLCRSN 184
>sp|Q8NG27|PJA1_HUMAN E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens GN=PJA1 PE=1
SV=2
Length = 643
Score = 64.3 bits (155), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 146 ESLKKLP-CHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHG 204
ES+ LP V D Q CC IC + + GE+A LP CHH FH CV WL + G
Sbjct: 572 ESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELP-CHHYFHKPCVSIWLQKSG 630
Query: 205 SCPVCR 210
+CPVCR
Sbjct: 631 TCPVCR 636
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 138 ALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVD 197
A RGLT +++LP + + ++ + C +C D +L R LP C+H FH CVD
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLP-CNHEFHTKCVD 408
Query: 198 KWLIRHGSCPVCRRD 212
KWL + +CP+CR D
Sbjct: 409 KWLKANRTCPICRAD 423
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 140 SRGLTGESLKKLPCHVILDEIK-PTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDK 198
++G+ ++L+ P E+ P C ICL D + GE R LP C+H FH+ C+DK
Sbjct: 106 NKGIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDK 165
Query: 199 WLIRHGSCPVCRR 211
WL +H +CP CR
Sbjct: 166 WLQQHLTCPKCRN 178
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 141 RGLTGESLKKLPCHVI-LDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKW 199
RGLT E + L D + CS+C+ D + G R LP C H FH+ C+D+W
Sbjct: 586 RGLTKEQIDNLSTRSYEQDGVDSELGKVCSVCISDYVAGNKLRQLP-CLHEFHIHCIDRW 644
Query: 200 LIRHGSCPVCRRDV 213
L + +CPVCRR V
Sbjct: 645 LSENCTCPVCRRPV 658
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 142 GLTGESLKKLPCHVILDEIKPTQS--------SCCSICLQDIIVGELARSLPHCHHTFHL 193
GLT E +K P + +E + + S SCCSICL D ++ R LP C+H FH
Sbjct: 96 GLTEEVIKGFP-KLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHD 154
Query: 194 ACVDKWLIRHGSCPVCR 210
CVD WL H +CPVCR
Sbjct: 155 NCVDPWLRLHPTCPVCR 171
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 168 CSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 213
C++CL D++ G+ AR LP C+H FH+ C+D W H +CP+CR V
Sbjct: 120 CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165
>sp|P0CH02|AT21B_ARATH Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana
GN=ATL21B PE=3 SV=1
Length = 362
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 119 HWQVRIASMSYDVNDTDCRALSRGLTGESLKKLPCHVILDEIKP--TQSSCCSICLQDII 176
HW V A+ + + A +RGL +++K + + +P T C ICL + +
Sbjct: 266 HWAVPAAAATVMQQPREVMA-TRGLDQSTIEKYKTMELGESRRPPGTNGIVCPICLSEYV 324
Query: 177 VGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRD 212
E R +P C H FH C+D WL HGSCP+CR
Sbjct: 325 SKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCRNS 360
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 138 ALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVD 197
A RGLT +++LP + E ++ + C +C D +L R LP C+H FH CVD
Sbjct: 366 AKPRGLTKADIEQLPSYRFNLENHQSEQTLCVVCFSDFESRQLLRVLP-CNHEFHAKCVD 424
Query: 198 KWLIRHGSCPVCRRD 212
KWL + +CP+CR D
Sbjct: 425 KWLKTNRTCPICRAD 439
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 135 DCRALSRGLTGESLKKLPCHVILDEIKPT-------QSSCCSICLQDIIVGELARSLPHC 187
D + ++GL ++L+ LP + S+ C+ICL D GE R LP C
Sbjct: 62 DSPSPNKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLC 121
Query: 188 HHTFHLACVDKWLIRHGSCPVCRR 211
H+FH+ C+DKWL+ SCP CRR
Sbjct: 122 GHSFHVECIDKWLVSRSSCPSCRR 145
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 120 WQVRIASM--SYDVNDTDCRALSRGLTGESLKKLPCHVILDEIKPTQSSC-CSICLQDII 176
W RIAS S + A ++GL + L+ LP + P + C+ICL +
Sbjct: 53 WLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFA 112
Query: 177 VGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRR 211
G+ R LP C H FH++C+D WL H SCP CR+
Sbjct: 113 AGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQ 147
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 142 GLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLI 201
GL+ + + LP VI E + S CS+CL D E + +P C HTFH+ C+D WL
Sbjct: 86 GLSKDIREMLPV-VIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLT 144
Query: 202 RHGSCPVCR 210
H +CP+CR
Sbjct: 145 SHTTCPLCR 153
>sp|Q6NML0|ATL76_ARATH E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76
PE=1 SV=1
Length = 225
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 140 SRGLTGESLKKLPCHVILDEIK-PTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDK 198
++G+ ++L+ P E+ P C ICL D + GE R LP C+H FH+ C+DK
Sbjct: 106 NKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDK 165
Query: 199 WLIRHGSCPVCR 210
WL H +CP CR
Sbjct: 166 WLQHHLTCPKCR 177
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 168 CSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCR 210
CS+CL+ + VGE+ R+LP C H FH C+D WL + G+CPVC+
Sbjct: 211 CSVCLEQVTVGEIVRTLP-CLHQFHAGCIDPWLRQQGTCPVCK 252
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1
SV=3
Length = 578
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 144 TGESLKKLPCHVILDEIKPT-QSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIR 202
+ ES+ LP ++ ++ Q CC IC + + GE+A LP CHH FH CV WL +
Sbjct: 505 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELP-CHHYFHKPCVSIWLQK 563
Query: 203 HGSCPVCR 210
G+CPVCR
Sbjct: 564 SGTCPVCR 571
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 138 ALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVD 197
A RGLT +++LP + ++ + C +C+ D +L R LP C+H FH CVD
Sbjct: 433 AKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVD 491
Query: 198 KWLIRHGSCPVCRRD 212
KWL + +CP+CR D
Sbjct: 492 KWLKANRTCPICRAD 506
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 164 QSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCR 210
+SS CS+CL + E R LP C+H FH+ C+D WL H +CP+CR
Sbjct: 155 ESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 134 TDCRALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHL 193
TD + GL +K LP + + CS+CL + E R +P+C HTFH+
Sbjct: 43 TDPSSTPGGLNPSIIKSLPI-FTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHV 101
Query: 194 ACVDKWLIRHGSCPVCRRDV 213
C+D W H SCP+CR +
Sbjct: 102 HCIDMWFHSHSSCPLCRSQI 121
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 168 CSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCR 210
C+ICL + + E + LP CHH FH+ C+DKWL H SCP CR
Sbjct: 131 CAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCR 173
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 142 GLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLI 201
GL +++ LP Q CS+CL E+ R LP C H FH+ C+D+WL
Sbjct: 97 GLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLE 156
Query: 202 RHGSCPVCRRDV 213
+H +CP+CR V
Sbjct: 157 QHATCPLCRDRV 168
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 120 WQVRIASMSYDVNDTDCR-------ALSRGLTGESLKKLPCHVILDEIKPTQS-SCCSIC 171
W R+A+ + V+ + + A ++GL + L+ LP E ++ + C+IC
Sbjct: 55 WLRRLAAGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAIC 114
Query: 172 LQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRR 211
L + G+ R LP C H FH+AC+D WL H SCP CR+
Sbjct: 115 LAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQ 154
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 168 CSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 213
CSICL + E R LP C+HTFH+ C+D+WL H +CP+CR +
Sbjct: 155 CSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKI 200
>sp|Q9C919|ATL19_ARATH Putative RING-H2 finger protein ATL19 OS=Arabidopsis thaliana
GN=ATL19 PE=3 SV=1
Length = 178
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 158 DEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 213
DE K +S C+ICL +V E R P C H +H C+D WL H +CP CR+D+
Sbjct: 120 DEEKSLESRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCRKDL 175
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 138 ALSRGLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVD 197
A RGLT +++LP + ++ + C +C+ D +L R LP C+H FH CVD
Sbjct: 436 AKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVD 494
Query: 198 KWLIRHGSCPVCRRD 212
KWL + +CP+CR D
Sbjct: 495 KWLKGNRTCPICRAD 509
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 168 CSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCRRDV 213
CS+CL E+ R LP C H FH+ C+D+WL +H +CP+CR V
Sbjct: 124 CSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRV 169
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 141 RGLTGESLKKLPCHVI--LDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDK 198
RGLT E + L D +K CS+C+ + G R LP C H +H+ C+D+
Sbjct: 544 RGLTKEQIDNLSTRNFGENDALK-----TCSVCITEYTEGNKLRKLP-CSHEYHIHCIDR 597
Query: 199 WLIRHGSCPVCRRDV 213
WL + +CP+CRR V
Sbjct: 598 WLSENSTCPICRRAV 612
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 144 TGESLKKLPCHVILDEIKPT---QSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWL 200
+ E ++KLP + +E+ ++ CC IC +++++G+ + LP C HTFH C+ WL
Sbjct: 204 SKEVVEKLPVIIFTEELLKKFGAEAECC-ICKENLVIGDKMQELP-CKHTFHPPCLKPWL 261
Query: 201 IRHGSCPVCRRDV 213
H SCP+CR ++
Sbjct: 262 DEHNSCPICRHEL 274
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 142 GLTGESLKKLPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLI 201
GL+ + + LP VI E + CS+CL D E + +P C HTFH+ C+D WL
Sbjct: 72 GLSKDIREMLPI-VIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLT 130
Query: 202 RHGSCPVCR 210
H +CP+CR
Sbjct: 131 SHTTCPLCR 139
>sp|Q9ZT49|ATL45_ARATH RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2
SV=1
Length = 200
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 151 LPCHVILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGSCPVCR 210
LPC + D T+ C+IC+ + GE R LP C H FH+AC+DKWL SCP CR
Sbjct: 99 LPCSSVGDGDSSTE---CAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155
Query: 211 R 211
R
Sbjct: 156 R 156
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 142 GLTGESLKKLPCHV-ILDEIKPTQSSCCSICLQDIIVGELARSLPHCHHTFHLACVDKWL 200
+T +++ K+P + K S CC+IC++ + R LP C H FH C+D WL
Sbjct: 276 SVTKKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILP-CKHEFHKNCIDPWL 334
Query: 201 IRHGSCPVCRRDV 213
I H +CP+C+ DV
Sbjct: 335 IEHRTCPMCKLDV 347
>sp|Q8SV35|Y733_ENCCU Uncharacterized RING finger protein ECU07_0330 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU07_0330 PE=4 SV=1
Length = 314
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 54 VLRGAGLGAIAGAVLSVELLEASRAYWCLERTGSRGSSSMADFVEDLLRGRFIEEQF--- 110
V+ G GLG S E + TG R S ++ ++ R ++
Sbjct: 163 VVTGDGLGNTQAPSQSAE---------AQDETGPRSSRTVGSRGFRVVFPRIPSQELRFL 213
Query: 111 --TPAILGAYHWQVRIASMSYDVNDTDCRALSRGLTGESLKKLPCHVILDEIKPTQSSCC 168
TP G+ + +++DV + A + T ESLKK I+ ++ + C
Sbjct: 214 FLTPQSEGSRGNIIYEIQINFDVFEASSEAPTTA-TKESLKK---SSIVRAVEADKGCEC 269
Query: 169 SICLQDIIVGELARSLPHCHHTFHLACVDKWLIRHGS-CPVCR 210
+IC+ + I + R LP C H FH+ CVDKWL+ H + CPVCR
Sbjct: 270 AICMSNFIKNQRLRVLP-CDHRFHVGCVDKWLLGHSNKCPVCR 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,716,085
Number of Sequences: 539616
Number of extensions: 3039668
Number of successful extensions: 13800
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 179
Number of HSP's that attempted gapping in prelim test: 10746
Number of HSP's gapped (non-prelim): 2898
length of query: 213
length of database: 191,569,459
effective HSP length: 113
effective length of query: 100
effective length of database: 130,592,851
effective search space: 13059285100
effective search space used: 13059285100
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)