Query 028124
Match_columns 213
No_of_seqs 147 out of 1292
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 10:30:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028124.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/028124hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2j0sa2 c.37.1.19 (A:244-411) 100.0 1.4E-38 1E-42 253.9 18.4 163 18-213 4-168 (168)
2 d1fuka_ c.37.1.19 (A:) Initiat 100.0 2.1E-38 1.5E-42 251.5 18.8 159 22-213 1-161 (162)
3 d1s2ma2 c.37.1.19 (A:252-422) 100.0 3.3E-37 2.4E-41 246.1 19.2 161 18-212 3-165 (171)
4 d2rb4a1 c.37.1.19 (A:307-474) 100.0 3.2E-36 2.3E-40 240.1 18.3 158 18-208 2-167 (168)
5 d1hv8a2 c.37.1.19 (A:211-365) 100.0 3.3E-35 2.4E-39 230.8 17.7 151 20-205 2-154 (155)
6 d1t5ia_ c.37.1.19 (A:) Spliceo 100.0 5.6E-34 4.1E-38 226.9 18.7 155 21-209 1-158 (168)
7 d1oywa3 c.37.1.19 (A:207-406) 100.0 1.8E-30 1.3E-34 212.2 19.1 141 18-194 3-145 (200)
8 d1t5la2 c.37.1.19 (A:415-595) 99.9 7.4E-27 5.4E-31 187.9 17.7 105 52-184 30-140 (181)
9 d1c4oa2 c.37.1.19 (A:410-583) 99.9 2.5E-26 1.8E-30 183.6 16.4 115 52-194 30-150 (174)
10 d1wp9a2 c.37.1.19 (A:201-486) 99.9 2.6E-24 1.9E-28 182.5 12.2 127 33-188 142-277 (286)
11 d1jr6a_ c.37.1.14 (A:) HCV hel 99.9 2E-24 1.4E-28 166.5 6.8 125 20-187 8-137 (138)
12 d1gkub2 c.37.1.16 (B:251-498) 99.8 1.2E-23 8.6E-28 175.5 -3.6 126 21-194 3-135 (248)
13 d2fwra1 c.37.1.19 (A:257-456) 99.8 8.5E-21 6.2E-25 153.0 8.7 116 33-186 78-198 (200)
14 d2p6ra4 c.37.1.19 (A:203-403) 99.8 1.7E-19 1.2E-23 146.4 11.5 110 53-189 40-189 (201)
15 d1a1va2 c.37.1.14 (A:326-624) 99.8 8.8E-21 6.4E-25 161.6 3.2 104 53-184 36-152 (299)
16 d1gm5a4 c.37.1.19 (A:550-755) 99.7 2.7E-19 2E-23 146.0 3.9 133 35-197 14-159 (206)
17 d2eyqa5 c.37.1.19 (A:779-989) 99.7 1.2E-16 8.9E-21 130.1 14.2 135 16-185 2-140 (211)
18 d1z3ix1 c.37.1.19 (X:390-735) 99.6 1.7E-15 1.2E-19 131.9 15.9 140 33-199 100-245 (346)
19 d1z5za1 c.37.1.19 (A:663-906) 99.6 1.1E-15 8E-20 126.2 13.7 136 33-197 68-210 (244)
20 d2bmfa2 c.37.1.14 (A:178-482) 99.4 3.3E-13 2.4E-17 112.6 9.1 101 52-185 177-299 (305)
21 d1yksa2 c.37.1.14 (A:325-623) 99.3 1.6E-12 1.2E-16 110.8 8.5 99 53-184 36-155 (299)
22 d1tf5a4 c.37.1.19 (A:396-570) 98.9 1.3E-08 9.2E-13 79.8 13.1 124 31-187 15-148 (175)
23 d1nkta4 c.37.1.19 (A:397-615) 97.5 0.0014 1E-07 51.8 14.1 125 31-188 15-193 (219)
24 d1gm5a3 c.37.1.19 (A:286-549) 96.9 0.0027 2E-07 51.7 9.7 106 35-172 117-226 (264)
25 d2eyqa3 c.37.1.19 (A:546-778) 96.3 0.021 1.5E-06 45.4 11.2 114 25-170 79-196 (233)
26 d1hv8a1 c.37.1.19 (A:3-210) Pu 92.5 0.93 6.8E-05 34.0 11.6 104 25-157 45-153 (208)
27 d2j0sa1 c.37.1.19 (A:22-243) P 91.6 0.49 3.6E-05 36.4 9.1 104 25-156 57-166 (222)
28 d1tq1a_ c.46.1.3 (A:) Thiosulf 88.0 0.23 1.7E-05 34.3 3.9 38 51-88 70-107 (119)
29 d2eyqa2 c.37.1.19 (A:349-465) 87.9 0.24 1.8E-05 34.5 3.9 76 35-156 22-97 (117)
30 d1t6na_ c.37.1.19 (A:) Spliceo 87.8 2.2 0.00016 31.8 10.0 106 25-157 41-153 (207)
31 d1gmxa_ c.46.1.3 (A:) Sulfurtr 87.6 0.44 3.2E-05 32.2 5.1 49 37-89 46-94 (108)
32 d1yt8a4 c.46.1.2 (A:243-372) T 84.8 0.59 4.3E-05 32.6 4.7 38 51-89 78-115 (130)
33 d1gkub1 c.37.1.16 (B:1-250) He 83.7 1.1 8.3E-05 33.9 6.4 77 52-156 85-169 (237)
34 d1urha2 c.46.1.2 (A:149-268) 3 83.6 1.1 8.1E-05 30.2 5.7 39 51-89 80-118 (120)
35 d1qxna_ c.46.1.3 (A:) Polysulf 77.6 1.1 7.7E-05 31.7 3.9 38 51-88 80-117 (137)
36 d1yt8a1 c.46.1.2 (A:107-242) T 76.9 1.8 0.00013 30.3 5.0 37 52-88 79-116 (136)
37 d1e0ca2 c.46.1.2 (A:136-271) S 75.3 1.5 0.00011 30.8 4.2 48 39-88 76-123 (136)
38 d1veca_ c.37.1.19 (A:) DEAD bo 73.3 7.7 0.00056 28.6 8.2 93 36-156 55-153 (206)
39 d1qdea_ c.37.1.19 (A:) Initiat 72.2 5.9 0.00043 29.4 7.3 92 37-157 63-159 (212)
40 d1wrba1 c.37.1.19 (A:164-401) 71.5 4.1 0.0003 31.0 6.3 106 25-157 61-180 (238)
41 d1yt8a2 c.46.1.2 (A:6-106) Thi 69.6 2.2 0.00016 27.8 3.7 39 51-89 56-94 (101)
42 d1yt8a3 c.46.1.2 (A:373-529) T 69.4 1.5 0.00011 31.4 3.0 38 51-88 56-93 (157)
43 d1s2ma1 c.37.1.19 (A:46-251) P 69.3 17 0.0013 26.2 10.6 105 25-157 41-151 (206)
44 d1uara2 c.46.1.2 (A:145-285) S 68.7 4 0.00029 28.7 5.2 51 36-88 74-125 (141)
45 d2b2na1 c.37.1.19 (A:26-333) T 68.0 11 0.00077 30.0 8.4 61 38-104 5-77 (308)
46 d2g9na1 c.37.1.19 (A:21-238) I 67.5 3 0.00022 31.4 4.6 105 25-156 52-162 (218)
47 d1rhsa2 c.46.1.2 (A:150-293) R 66.0 3.2 0.00024 29.3 4.2 52 36-89 76-127 (144)
48 d1urha1 c.46.1.2 (A:2-148) 3-m 62.0 4.3 0.00031 28.6 4.3 51 36-88 70-121 (147)
49 d1wmaa1 c.2.1.2 (A:2-276) Carb 59.7 27 0.0019 26.3 9.2 63 52-136 27-90 (275)
50 d1uara1 c.46.1.2 (A:2-144) Sul 54.7 8.9 0.00065 26.6 4.9 50 37-88 64-114 (143)
51 g1pyo.1 c.17.1.1 (A:,B:) Caspa 54.7 13 0.00096 28.2 6.4 47 54-102 27-87 (257)
52 d1okga1 c.46.1.2 (A:7-162) 3-m 53.7 14 0.00099 26.4 5.9 49 37-88 75-125 (156)
53 g1qtn.1 c.17.1.1 (A:,B:) Caspa 53.2 15 0.0011 27.4 6.5 38 64-103 43-80 (242)
54 d1wp9a1 c.37.1.19 (A:1-200) pu 52.5 31 0.0023 24.1 8.0 123 52-202 51-184 (200)
55 d1em8a_ c.128.1.1 (A:) DNA pol 51.0 12 0.00087 26.2 5.1 39 35-76 21-59 (147)
56 d2rhca1 c.2.1.2 (A:5-261) beta 50.1 45 0.0033 24.7 10.0 48 52-100 25-73 (257)
57 d1rhsa1 c.46.1.2 (A:1-149) Rho 48.9 9.9 0.00072 26.6 4.4 50 37-88 78-130 (149)
58 d1gega_ c.2.1.2 (A:) meso-2,3- 45.2 54 0.004 24.3 9.0 42 52-94 24-65 (255)
59 d2c07a1 c.2.1.2 (A:54-304) bet 45.0 55 0.004 24.2 10.3 41 52-93 33-73 (251)
60 d1m72a_ c.17.1.1 (A:) Caspase- 44.3 20 0.0014 27.1 5.9 47 55-103 23-82 (256)
61 d1fmca_ c.2.1.2 (A:) 7-alpha-h 42.4 53 0.0038 24.5 8.2 41 52-93 34-74 (255)
62 d1srva_ c.8.5.1 (A:) GroEL, A 40.0 19 0.0014 25.3 4.7 78 21-102 23-103 (145)
63 d1ae1a_ c.2.1.2 (A:) Tropinone 38.6 71 0.0052 23.7 9.9 42 52-94 29-70 (258)
64 d1s8na_ c.23.1.1 (A:) Probable 37.2 62 0.0045 22.6 9.1 111 26-171 6-117 (190)
65 d1ycga1 c.23.5.1 (A:251-399) N 37.2 53 0.0039 21.9 8.9 38 62-102 16-53 (149)
66 d1ys7a2 c.23.1.1 (A:7-127) Tra 36.4 51 0.0037 21.5 9.4 111 26-171 4-115 (121)
67 d1edoa_ c.2.1.2 (A:) beta-keto 36.1 76 0.0055 23.3 9.4 49 52-101 24-74 (244)
68 d1okga2 c.46.1.2 (A:163-301) 3 34.7 8.3 0.0006 26.7 1.9 40 51-90 82-121 (139)
69 d1yb1a_ c.2.1.2 (A:) 17-beta-h 34.5 81 0.0059 23.2 8.5 48 52-100 30-78 (244)
70 d1vl8a_ c.2.1.2 (A:) Gluconate 32.4 89 0.0065 23.0 8.4 41 52-93 28-69 (251)
71 g1nme.1 c.17.1.1 (A:,B:) Apopa 31.7 32 0.0024 25.5 5.2 38 64-103 41-78 (238)
72 d1vb3a1 c.79.1.1 (A:1-428) Thr 28.0 79 0.0057 25.9 7.4 58 35-95 110-169 (428)
73 d1ewka_ c.93.1.1 (A:) Metabotr 27.4 1.4E+02 0.01 23.7 9.1 79 19-103 160-245 (477)
74 d1t0ia_ c.23.5.4 (A:) Hypothet 26.7 96 0.007 21.6 8.6 56 128-200 86-145 (185)
75 d1pjra2 c.37.1.19 (A:319-651) 26.5 1E+02 0.0074 22.7 7.5 51 35-86 14-65 (333)
76 d1f1ja_ c.17.1.1 (A:) Caspase- 26.4 45 0.0033 24.6 5.2 48 54-103 11-72 (245)
77 d2ae2a_ c.2.1.2 (A:) Tropinone 26.2 1.2E+02 0.0084 22.4 9.3 48 52-100 31-79 (259)
78 d1nw9b_ c.17.1.1 (B:) Caspase- 24.6 63 0.0046 23.9 5.8 50 52-103 20-83 (277)
79 g1sc3.1 c.17.1.1 (A:,B:) Inter 24.4 95 0.0069 22.8 6.8 46 55-102 40-96 (261)
80 d1vmea1 c.23.5.1 (A:251-398) R 23.9 81 0.0059 20.9 5.8 22 62-84 17-38 (148)
81 d1o54a_ c.66.1.13 (A:) Hypothe 23.6 31 0.0022 26.4 3.7 39 35-77 183-221 (266)
82 d1zk4a1 c.2.1.2 (A:1-251) R-sp 23.3 1.3E+02 0.0095 21.9 9.5 40 52-93 29-68 (251)
83 d1zema1 c.2.1.2 (A:3-262) Xyli 23.2 1.3E+02 0.0097 22.0 8.6 41 52-93 28-68 (260)
84 d1luaa1 c.2.1.7 (A:98-288) Met 22.9 1.1E+02 0.0079 21.3 6.6 37 50-87 20-56 (191)
85 d1u0sy_ c.23.1.1 (Y:) CheY pro 22.9 91 0.0066 20.0 9.3 68 26-103 4-71 (118)
86 d1krwa_ c.23.1.1 (A:) NTRC rec 22.7 93 0.0068 20.0 6.3 68 25-103 5-72 (123)
87 d1sbya1 c.2.1.2 (A:1-254) Dros 22.4 1.4E+02 0.01 21.9 8.2 51 52-102 28-80 (254)
88 d1piia1 c.1.2.4 (A:255-452) N- 22.0 1.1E+02 0.0082 21.7 6.6 52 37-96 40-91 (198)
89 d1xg5a_ c.2.1.2 (A:) Putative 20.8 1.5E+02 0.011 21.7 10.0 43 52-94 33-76 (257)
90 d1geea_ c.2.1.2 (A:) Glucose d 20.6 1.5E+02 0.011 21.7 9.5 41 52-93 30-71 (261)
No 1
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.4e-38 Score=253.93 Aligned_cols=163 Identities=28% Similarity=0.568 Sum_probs=154.5
Q ss_pred CCCCceEEEEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHH
Q 028124 18 HFSQPRHFYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLIL 97 (213)
Q Consensus 18 ~~~~i~~~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l 97 (213)
+..+|+|+|+.++++++|++.|.++++.. +..++||||+++.+++.++..|...+ +.+..+||++++++|..++
T Consensus 4 tl~~i~q~~v~v~~~~~K~~~L~~ll~~~-----~~~k~iiF~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~r~~~~ 77 (168)
T d2j0sa2 4 TLEGIKQFFVAVEREEWKFDTLCDLYDTL-----TITQAVIFCNTKRKVDWLTEKMREAN-FTVSSMHGDMPQKERESIM 77 (168)
T ss_dssp SCTTEEEEEEEESSTTHHHHHHHHHHHHH-----TSSEEEEECSSHHHHHHHHHHHHHTT-CCCEEECTTSCHHHHHHHH
T ss_pred CCCCcEEEEEEecChHHHHHHHHHHHHhC-----CCCceEEEeeeHHHHHHHHHHhhhcc-cchhhhhhhhhHHHHHHHH
Confidence 56899999999999888999999999873 45799999999999999999999987 8999999999999999999
Q ss_pred HHHhcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhccc--cCC
Q 028124 98 EEFRHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPTKKETYIRRMTTC--LAA 175 (213)
Q Consensus 98 ~~Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR~--~~~ 175 (213)
++|++|+ .++|||||+ ++||+|+|++++|||||+|++.++|+||+||+ +|+
T Consensus 78 ~~fk~g~-----------------------~~iLv~Td~----~~rGiDi~~v~~VIn~d~P~~~~~yihR~GR~gR~g~ 130 (168)
T d2j0sa2 78 KEFRSGA-----------------------SRVLISTDV----WARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGR 130 (168)
T ss_dssp HHHHHTS-----------------------SCEEEECGG----GSSSCCCTTEEEEEESSCCSSHHHHHHHHTTSSGGGC
T ss_pred HHHhcCC-----------------------ccEEeccch----hcccccccCcceEEEecCCcCHHHHHhhhccccccCC
Confidence 9999985 999999999 99999999999999999999999999999996 677
Q ss_pred CCeEEEEEeCchhHHHHHHHHHhcccccccCccccccC
Q 028124 176 DGSVINIVVGGEVVTLRSMEESLGLIVAEVPINISEIL 213 (213)
Q Consensus 176 ~g~~i~~~~~~e~~~~~~le~~l~~~~~~~~~~~~~~~ 213 (213)
.|.+|+|+.+.|...++.+++.++.+++++|+++.|||
T Consensus 131 ~G~~i~~~~~~d~~~~~~i~~~~~~~i~e~p~~~~dii 168 (168)
T d2j0sa2 131 KGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 168 (168)
T ss_dssp CEEEEEEEEGGGHHHHHHHHHHTTCCCEECCSCCTTTC
T ss_pred CcEEEEEECHHHHHHHHHHHHHHcCcCCCCCcChHHhC
Confidence 89999999999999999999999999999999999986
No 2
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.1e-38 Score=251.45 Aligned_cols=159 Identities=30% Similarity=0.552 Sum_probs=148.3
Q ss_pred ceEEEEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHh
Q 028124 22 PRHFYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFR 101 (213)
Q Consensus 22 i~~~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr 101 (213)
|+|+|+.+++.+.|++.|.++++. .+..++||||+++.+++++++.|...+ +.+..+||+|++++|..+++.|+
T Consensus 1 I~q~~~~v~~~e~K~~~L~~ll~~-----~~~~k~iIF~~s~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~r~~~l~~f~ 74 (162)
T d1fuka_ 1 IKQFYVNVEEEEYKYECLTDLYDS-----ISVTQAVIFCNTRRKVEELTTKLRNDK-FTVSAIYSDLPQQERDTIMKEFR 74 (162)
T ss_dssp CEEEEEEEESGGGHHHHHHHHHHH-----TTCSCEEEEESSHHHHHHHHHHHHHTT-CCEEEECTTSCHHHHHHHHHHHH
T ss_pred CEEEEEEeCCcHHHHHHHHHHHHh-----CCCCcEEEEEEEEchHHHHHHHHhhcC-ceEEEeccCCchhhHHHHHHHHh
Confidence 689999999888899999999988 456899999999999999999999987 89999999999999999999999
Q ss_pred cccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhccc--cCCCCeE
Q 028124 102 HTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPTKKETYIRRMTTC--LAADGSV 179 (213)
Q Consensus 102 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR~--~~~~g~~ 179 (213)
.|+ .++|||||+ ++||+|+++|++|||||+|++++.|+||+||+ .|+.|.|
T Consensus 75 ~~~-----------------------~~iLv~Tdv----~~rGiDi~~v~~VI~~d~P~~~~~yihR~GR~gR~g~~g~~ 127 (162)
T d1fuka_ 75 SGS-----------------------SRILISTDL----LARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVA 127 (162)
T ss_dssp TTS-----------------------CSEEEEEGG----GTTTCCCCSCSEEEESSCCSSGGGGGGSSCSCC-----CEE
T ss_pred hcc-----------------------cceeecccc----ccccccCCCceEEEEeccchhHHHHHhhccccccCCCccEE
Confidence 985 999999999 99999999999999999999999999999997 6778999
Q ss_pred EEEEeCchhHHHHHHHHHhcccccccCccccccC
Q 028124 180 INIVVGGEVVTLRSMEESLGLIVAEVPINISEIL 213 (213)
Q Consensus 180 i~~~~~~e~~~~~~le~~l~~~~~~~~~~~~~~~ 213 (213)
++|++++|...++.+++.++.+++++|.+++++|
T Consensus 128 i~~~~~~d~~~~~~i~~~~~~~~~~ip~~~~~l~ 161 (162)
T d1fuka_ 128 INFVTNEDVGAMRELEKFYSTQIEELPSDIATLL 161 (162)
T ss_dssp EEEEETTTHHHHHHHHHHSSCCCEECCSCCTTTT
T ss_pred EEEcCHHHHHHHHHHHHHHcCcCCCCChHHHHhh
Confidence 9999999999999999999999999999999886
No 3
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.3e-37 Score=246.05 Aligned_cols=161 Identities=24% Similarity=0.437 Sum_probs=151.4
Q ss_pred CCCCceEEEEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHH
Q 028124 18 HFSQPRHFYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLIL 97 (213)
Q Consensus 18 ~~~~i~~~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l 97 (213)
+..+|+|+|+.+++.+ |+..|.++|+. .+..++||||+++++++.++..|...| +.+..+||+|++++|.+++
T Consensus 3 tl~~i~q~yi~v~~~~-K~~~L~~ll~~-----~~~~k~iVF~~~~~~~~~l~~~L~~~g-~~~~~~h~~~~~~~r~~~~ 75 (171)
T d1s2ma2 3 TLKGITQYYAFVEERQ-KLHCLNTLFSK-----LQINQAIIFCNSTNRVELLAKKITDLG-YSCYYSHARMKQQERNKVF 75 (171)
T ss_dssp BCTTEEEEEEECCGGG-HHHHHHHHHHH-----SCCSEEEEECSSHHHHHHHHHHHHHHT-CCEEEECTTSCHHHHHHHH
T ss_pred CccceEEEEEEcCHHH-HHHHHHHHHHh-----CCCCceEEEEeeeehhhHhHHhhhccc-ccccccccccchhhhhhhh
Confidence 4678999999999865 99999999988 466899999999999999999999998 8999999999999999999
Q ss_pred HHHhcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhccc--cCC
Q 028124 98 EEFRHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPTKKETYIRRMTTC--LAA 175 (213)
Q Consensus 98 ~~Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR~--~~~ 175 (213)
++|+.|. .++|||||+ ++||+|+|++++|||||+|+++++|+||+||+ .|+
T Consensus 76 ~~f~~~~-----------------------~~ilv~Td~----~~~Gid~~~v~~VI~~d~p~~~~~y~qr~GR~gR~g~ 128 (171)
T d1s2ma2 76 HEFRQGK-----------------------VRTLVCSDL----LTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 128 (171)
T ss_dssp HHHHTTS-----------------------SSEEEESSC----SSSSCCCTTEEEEEESSCCSSHHHHHHHHCBSSCTTC
T ss_pred hhcccCc-----------------------cccccchhH----hhhccccceeEEEEecCCcchHHHHHHHhhhcccCCC
Confidence 9999985 999999999 99999999999999999999999999999997 567
Q ss_pred CCeEEEEEeCchhHHHHHHHHHhcccccccCcccccc
Q 028124 176 DGSVINIVVGGEVVTLRSMEESLGLIVAEVPINISEI 212 (213)
Q Consensus 176 ~g~~i~~~~~~e~~~~~~le~~l~~~~~~~~~~~~~~ 212 (213)
.|.||+|+++.|...++.+++.++.++.++|..+++.
T Consensus 129 ~g~~i~~v~~~e~~~~~~i~~~l~~~~~~~p~~~d~~ 165 (171)
T d1s2ma2 129 LGLAINLINWNDRFNLYKIEQELGTEIAAIPATIDKS 165 (171)
T ss_dssp CEEEEEEECGGGHHHHHHHHHHHTCCCEECCSSCCGG
T ss_pred ccEEEEEeCHHHHHHHHHHHHHHCCCCCCCCcccchh
Confidence 8999999999999999999999999999999988764
No 4
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.2e-36 Score=240.11 Aligned_cols=158 Identities=18% Similarity=0.349 Sum_probs=146.2
Q ss_pred CCCCceEEEEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHH
Q 028124 18 HFSQPRHFYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLIL 97 (213)
Q Consensus 18 ~~~~i~~~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l 97 (213)
+..+|+|+|+.+++..+|++.|.++++. ....++||||++++++++|+..|...+ +.+..+||+|++++|.+++
T Consensus 2 tl~~ikq~y~~~~~~~~K~~~L~~ll~~-----~~~~~~lIF~~~~~~~~~l~~~l~~~~-~~~~~~hg~~~~~~R~~~~ 75 (168)
T d2rb4a1 2 TLNNIRQYYVLCEHRKDKYQALCNIYGS-----ITIGQAIIFCQTRRNAKWLTVEMIQDG-HQVSLLSGELTVEQRASII 75 (168)
T ss_dssp CBCCEEEEEEECSSHHHHHHHHHHHHTT-----SCCSEEEEECSCHHHHHHHHHHHHTTT-CCEEEECSSCCHHHHHHHH
T ss_pred CccccEEEEEEeCCHHHHHHHHHHHHHh-----CCCCcEEEEcCHHHHHHHHHHHHHhcC-CcceecccchhhHHHHHHh
Confidence 4678999999999888899999999976 456899999999999999999999987 8999999999999999999
Q ss_pred HHHhcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCC------ChHHHHHhhcc
Q 028124 98 EEFRHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPT------KKETYIRRMTT 171 (213)
Q Consensus 98 ~~Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~------~~~~yi~R~GR 171 (213)
++|++|. .++||||++ ++||+|++++++|||||+|+ ++++|+||+||
T Consensus 76 ~~F~~g~-----------------------~~ilv~Td~----~~~Gid~~~v~~Vi~yd~P~~~~~~~~~~~yihR~GR 128 (168)
T d2rb4a1 76 QRFRDGK-----------------------EKVLITTNV----CARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGR 128 (168)
T ss_dssp HHHHTTS-----------------------CSEEEECCS----CCTTTCCTTEEEEEESSCCC--CCSCCHHHHHHHHCB
T ss_pred hhhcCCc-----------------------eeeeechhh----hhhhhccccccEEEeecCCCcccccCCHHHHHHHhhh
Confidence 9999985 999999999 99999999999999999998 57899999999
Q ss_pred c--cCCCCeEEEEEeCchhHHHHHHHHHhcccccccCcc
Q 028124 172 C--LAADGSVINIVVGGEVVTLRSMEESLGLIVAEVPIN 208 (213)
Q Consensus 172 ~--~~~~g~~i~~~~~~e~~~~~~le~~l~~~~~~~~~~ 208 (213)
+ .|+.|.||+|++++|...+.++++.++.+++++|++
T Consensus 129 ~gR~g~~g~~i~~~~~~d~~~l~~i~~~~~~~i~el~~~ 167 (168)
T d2rb4a1 129 TGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSIKQLNAE 167 (168)
T ss_dssp C----CCEEEEEEECGGGHHHHHHHHHHHTCCCEEECSS
T ss_pred cccCCCceEEEEEEcHHHHHHHHHHHHHHCCCCCcCCCC
Confidence 6 678899999999999999999999999999998864
No 5
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=3.3e-35 Score=230.77 Aligned_cols=151 Identities=23% Similarity=0.467 Sum_probs=141.4
Q ss_pred CCceEEEEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHH
Q 028124 20 SQPRHFYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEE 99 (213)
Q Consensus 20 ~~i~~~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~ 99 (213)
++|+|+|+.++.++ |++.|.++|+. ...++||||+++++|+.+++.|+..+ +.+..+||++++.+|..++++
T Consensus 2 ~nI~~~~i~v~~~~-K~~~L~~ll~~------~~~k~IIF~~s~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~r~~~~~~ 73 (155)
T d1hv8a2 2 ANIEQSYVEVNENE-RFEALCRLLKN------KEFYGLVFCKTKRDTKELASMLRDIG-FKAGAIHGDLSQSQREKVIRL 73 (155)
T ss_dssp SSSEEEEEECCGGG-HHHHHHHHHCS------TTCCEEEECSSHHHHHHHHHHHHHTT-CCEEEECSSSCHHHHHHHHHH
T ss_pred CCeEEEEEEeChHH-HHHHHHHHHcc------CCCCEEEEECchHHHHHHHhhhcccc-cccccccccchhhhhhhhhhh
Confidence 58999999998865 99999999876 34689999999999999999999987 899999999999999999999
Q ss_pred HhcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhccc--cCCCC
Q 028124 100 FRHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPTKKETYIRRMTTC--LAADG 177 (213)
Q Consensus 100 Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR~--~~~~g 177 (213)
|++|+ .++|||||+ +++|+|+|++++|||||+|+++.+|+||+||+ .|+.|
T Consensus 74 f~~~~-----------------------~~ilv~T~~----~~~Gid~~~v~~Vi~~d~p~~~~~y~qr~GR~gR~g~~g 126 (155)
T d1hv8a2 74 FKQKK-----------------------IRILIATDV----MSRGIDVNDLNCVINYHLPQNPESYMHRIGRTGRAGKKG 126 (155)
T ss_dssp HHTTS-----------------------SSEEEECTT----HHHHCCCSCCSEEEESSCCSCHHHHHHHSTTTCCSSSCC
T ss_pred hhccc-----------------------ceeeeehhH----HhhhhhhccCcEEEEecCCCCHHHHHHHHHhcCcCCCCc
Confidence 99985 899999999 99999999999999999999999999999997 46789
Q ss_pred eEEEEEeCchhHHHHHHHHHhccccccc
Q 028124 178 SVINIVVGGEVVTLRSMEESLGLIVAEV 205 (213)
Q Consensus 178 ~~i~~~~~~e~~~~~~le~~l~~~~~~~ 205 (213)
.+|+|+.+.|...++.+++.++.+++++
T Consensus 127 ~~i~~~~~~d~~~~~~i~~~~~~~i~~l 154 (155)
T d1hv8a2 127 KAISIINRREYKKLRYIERAMKLKIKKL 154 (155)
T ss_dssp EEEEEECTTSHHHHHHHHHHHTCCCCCB
T ss_pred eEEEEEchHHHHHHHHHHHHHCCCcccc
Confidence 9999999999999999999999998876
No 6
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=5.6e-34 Score=226.90 Aligned_cols=155 Identities=18% Similarity=0.365 Sum_probs=141.6
Q ss_pred CceEEEEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHH
Q 028124 21 QPRHFYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEF 100 (213)
Q Consensus 21 ~i~~~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~F 100 (213)
+|+|+|+.+.+++ |++.|.++|+. ....++||||+++++++.|++.|.+.+ +.+..+||+|++++|.+++++|
T Consensus 1 ~l~q~~v~~~~~~-K~~~L~~ll~~-----~~~~k~iIF~~~~~~~~~l~~~L~~~~-~~~~~ihg~~~~~~r~~~l~~F 73 (168)
T d1t5ia_ 1 GLQQYYVKLKDNE-KNRKLFDLLDV-----LEFNQVVIFVKSVQRCIALAQLLVEQN-FPAIAIHRGMPQEERLSRYQQF 73 (168)
T ss_dssp CCEEEEEECCGGG-HHHHHHHHHHH-----SCCSSEEEECSSHHHHHHHHHHHHHTT-CCEEEECTTSCHHHHHHHHHHH
T ss_pred CcEEEEEEeChHH-HHHHHHHHHHh-----CCCCeEEEEEeeeecchhhhhhhcccc-ccccccccccchhhhhhhhhhh
Confidence 5899999999866 99999999988 356799999999999999999999987 8999999999999999999999
Q ss_pred hcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhccc--cCCCCe
Q 028124 101 RHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPTKKETYIRRMTTC--LAADGS 178 (213)
Q Consensus 101 r~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR~--~~~~g~ 178 (213)
++|+ .++||||++ +++|+|+|++++|||||+|+++..|+||+||+ +|+.|.
T Consensus 74 ~~g~-----------------------~~iLv~T~~----~~~Gid~~~~~~vi~~~~p~~~~~yiqr~GR~gR~g~~g~ 126 (168)
T d1t5ia_ 74 KDFQ-----------------------RRILVATNL----FGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGL 126 (168)
T ss_dssp HTTS-----------------------CSEEEESSC----CSTTCCGGGCSEEEESSCCSSHHHHHHHHHHHTGGGCCCE
T ss_pred cccc-----------------------ceeeecccc----ccchhhcccchhhhhhhcccchhhHhhhhhhcccCCCccE
Confidence 9985 999999999 99999999999999999999999999999996 578899
Q ss_pred EEEEEeCc-hhHHHHHHHHHhcccccccCccc
Q 028124 179 VINIVVGG-EVVTLRSMEESLGLIVAEVPINI 209 (213)
Q Consensus 179 ~i~~~~~~-e~~~~~~le~~l~~~~~~~~~~~ 209 (213)
||+|+++. +...+..+++.++..+.++|..+
T Consensus 127 ~i~l~~~~~~~~~~~~i~~~~~~~~~elp~~~ 158 (168)
T d1t5ia_ 127 AITFVSDENDAKILNDVQDRFEVNISELPDEI 158 (168)
T ss_dssp EEEEECSHHHHHHHHHHHHHHCCCEEECC---
T ss_pred EEEEECchHHHHHHHHHHHHHcCCcccCCchh
Confidence 99999875 67788999999999999988554
No 7
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.97 E-value=1.8e-30 Score=212.18 Aligned_cols=141 Identities=18% Similarity=0.361 Sum_probs=126.7
Q ss_pred CCCCceEEEEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHH
Q 028124 18 HFSQPRHFYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLIL 97 (213)
Q Consensus 18 ~~~~i~~~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l 97 (213)
.++||. |..++..+ |++.|.++|+. ..+.++||||+|+..++.|+..|...+ +.+..+||++++++|.+++
T Consensus 3 ~RpNi~--y~v~~~~~-k~~~L~~~l~~-----~~~~~~IIF~~t~~~~~~l~~~l~~~~-~~~~~~h~~~~~~~r~~~~ 73 (200)
T d1oywa3 3 DRPNIR--YMLMEKFK-PLDQLMRYVQE-----QRGKSGIIYCNSRAKVEDTAARLQSKG-ISAAAYHAGLENNVRADVQ 73 (200)
T ss_dssp CCTTEE--EEEEECSS-HHHHHHHHHHH-----TTTCCEEEECSSHHHHHHHHHHHHHTT-CCEEEECTTSCHHHHHHHH
T ss_pred CCCCcE--EEEEcCCc-HHHHHHHHHHh-----cCCCCEEEEEeeehhhHHhhhhhccCC-ceeEEecCCCcHHHHHHHH
Confidence 567774 44455555 99999999987 456799999999999999999999987 8999999999999999999
Q ss_pred HHHhcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhccc--cCC
Q 028124 98 EEFRHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPTKKETYIRRMTTC--LAA 175 (213)
Q Consensus 98 ~~Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR~--~~~ 175 (213)
++|++|+ .++|||||+ ++||+|+|+|++|||||+|+++++|+||+||+ .|+
T Consensus 74 ~~f~~g~-----------------------~~ilvaTd~----~~~GiD~p~v~~VI~~~~P~~~~~y~qr~GR~gR~g~ 126 (200)
T d1oywa3 74 EKFQRDD-----------------------LQIVVATVA----FGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGL 126 (200)
T ss_dssp HHHHTTS-----------------------CSEEEECTT----SCTTTCCTTCCEEEESSCCSSHHHHHHHHTTSCTTSS
T ss_pred HHHhccc-----------------------ceEEEecch----hhhccCCCCCCEEEECCCccchHHHHHHhhhhhcCCC
Confidence 9999985 999999999 99999999999999999999999999999997 577
Q ss_pred CCeEEEEEeCchhHHHHHH
Q 028124 176 DGSVINIVVGGEVVTLRSM 194 (213)
Q Consensus 176 ~g~~i~~~~~~e~~~~~~l 194 (213)
.|.+++|+++.|...++++
T Consensus 127 ~g~ai~~~~~~d~~~l~~~ 145 (200)
T d1oywa3 127 PAEAMLFYDPADMAWLRRC 145 (200)
T ss_dssp CEEEEEEECHHHHHHHHHH
T ss_pred CceEEEecCHHHHHHHHhh
Confidence 8999999999888777654
No 8
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=99.95 E-value=7.4e-27 Score=187.90 Aligned_cols=105 Identities=15% Similarity=0.213 Sum_probs=95.1
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhcccccccccccccCCCCCcCCCCCCceeEE
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHTAMKWNQKVTEQSGDESETGKDEHKSHMI 131 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~iL 131 (213)
.+.++||||+++..++.++..|...| +.+..+||+|++++|.+++++|++|+ .++|
T Consensus 30 ~~~~~iif~~~~~~~~~~~~~l~~~g-~~~~~~hg~~~~~eR~~~l~~Fr~g~-----------------------~~vL 85 (181)
T d1t5la2 30 RNERTLVTTLTKKMAEDLTDYLKEAG-IKVAYLHSEIKTLERIEIIRDLRLGK-----------------------YDVL 85 (181)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHTTT-CCEEEECSSCCHHHHHHHHHHHHHTS-----------------------CSEE
T ss_pred cCCeEEEEeehhhhhHHHHHHHHhCC-cceeEecCCccHHHHHHHHHHHHCCC-----------------------CCEE
Confidence 46799999999999999999999998 89999999999999999999999995 9999
Q ss_pred EEeCCCCCcCcCCCCCCCCCEEEEecCCC-----ChHHHHHhhccccCCC-CeEEEEEe
Q 028124 132 VVTDACLPLLSSGESAISARVLINYELPT-----KKETYIRRMTTCLAAD-GSVINIVV 184 (213)
Q Consensus 132 V~Td~~~~~~~rGld~~~v~~VI~yd~P~-----~~~~yi~R~GR~~~~~-g~~i~~~~ 184 (213)
||||+ ++||+|+|+|++|||||+|. +..+|+||+||+|+.. |.++.+..
T Consensus 86 VaTdv----~~rGiDip~v~~VI~~d~p~~~~~~s~~~yi~R~GRagR~g~~~~~~~~~ 140 (181)
T d1t5la2 86 VGINL----LREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNANGHVIMYAD 140 (181)
T ss_dssp EESCC----CSSSCCCTTEEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTTCEEEEECS
T ss_pred EehhH----HHccCCCCCCCEEEEecCCcccccccHHHHHHHHHhhccccCceeEeecc
Confidence 99999 99999999999999999995 6899999999986554 44444444
No 9
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=99.94 E-value=2.5e-26 Score=183.56 Aligned_cols=115 Identities=14% Similarity=0.152 Sum_probs=100.4
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhcccccccccccccCCCCCcCCCCCCceeEE
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHTAMKWNQKVTEQSGDESETGKDEHKSHMI 131 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~iL 131 (213)
.+.++||||++++.|+.|+..|...| +.+..+||+|++.+|.+++++|++|+ +++|
T Consensus 30 ~g~r~lvfc~t~~~~~~l~~~L~~~G-i~a~~~Hg~~~~~eR~~~l~~F~~G~-----------------------~~vL 85 (174)
T d1c4oa2 30 RGERTLVTVLTVRMAEELTSFLVEHG-IRARYLHHELDAFKRQALIRDLRLGH-----------------------YDCL 85 (174)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTT-CCEEEECTTCCHHHHHHHHHHHHTTS-----------------------CSEE
T ss_pred cCCcEEEEEcchhHHHHHHHHHHhcC-CceEEEecccchHHHHHHHHHHHCCC-----------------------eEEE
Confidence 57899999999999999999999998 99999999999999999999999995 9999
Q ss_pred EEeCCCCCcCcCCCCCCCCCEEEEecCCC-----ChHHHHHhhccccCC-CCeEEEEEeCchhHHHHHH
Q 028124 132 VVTDACLPLLSSGESAISARVLINYELPT-----KKETYIRRMTTCLAA-DGSVINIVVGGEVVTLRSM 194 (213)
Q Consensus 132 V~Td~~~~~~~rGld~~~v~~VI~yd~P~-----~~~~yi~R~GR~~~~-~g~~i~~~~~~e~~~~~~l 194 (213)
|+|++ ++||+|+|+|++|||||+|. +.+.|+||+||+++. .|.++.+.......+.+.+
T Consensus 86 VaT~v----~~~GiDip~V~~Vi~~~~~~~~~~~~~~~~iq~~GR~gR~~~g~~~~~~~~~~~~~~~~i 150 (174)
T d1c4oa2 86 VGINL----LREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNARGEVWLYADRVSEAMQRAI 150 (174)
T ss_dssp EESCC----CCTTCCCTTEEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTTCEEEEECSSCCHHHHHHH
T ss_pred Eeeee----eeeeccCCCCcEEEEeccccccccchhHHHHHHhhhhhhcCCCeeEEeecCCCHHHHHHH
Confidence 99999 99999999999999999765 568899999998644 3777777765443333333
No 10
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.90 E-value=2.6e-24 Score=182.46 Aligned_cols=127 Identities=21% Similarity=0.286 Sum_probs=109.1
Q ss_pred chHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecC--------CCCHHHHHHHHHHHhccc
Q 028124 33 QFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHS--------DLAETERTLILEEFRHTA 104 (213)
Q Consensus 33 ~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg--------~~~~~~R~~~l~~Fr~g~ 104 (213)
+.|++.|.++|..+.. ..+..++||||+++++++.+++.|...+ +.+..+|| +++..+|..++++|++|+
T Consensus 142 ~pK~~~l~~~l~~~~~-~~~~~k~iiF~~~~~~~~~~~~~L~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~g~ 219 (286)
T d1wp9a2 142 HPKMDKLKEIIREQLQ-RKQNSKIIVFTNYRETAKKIVNELVKDG-IKAKRFVGQASKENDRGLSQREQKLILDEFARGE 219 (286)
T ss_dssp CHHHHHHHHHHHHHHH-HCTTCCEEEECSCHHHHHHHHHHHHHTT-CCEEEECCSSCC-------CCHHHHHHHHHHHTS
T ss_pred CcHHHHHHHHHHHHHH-hCCCCcEEEEeCcHHhHHHHHHHHHHcC-CceEEeeccccccccchhchHHHHHHHHHHHcCC
Confidence 4588998888876543 3567899999999999999999999887 78888876 466678999999999985
Q ss_pred ccccccccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhccccC-CCCeEEEEE
Q 028124 105 MKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPTKKETYIRRMTTCLA-ADGSVINIV 183 (213)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR~~~-~~g~~i~~~ 183 (213)
+++||||++ +++|+|+|+|++|||||+|+++..|+||+||+++ ++|.++.|+
T Consensus 220 -----------------------~~vLv~T~~----~~~Gld~~~~~~Vi~~d~~~~~~~~~Qr~GR~gR~~~~~~~~l~ 272 (286)
T d1wp9a2 220 -----------------------FNVLVATSV----GEEGLDVPEVDLVVFYEPVPSAIRSIQRRGRTGRHMPGRVIILM 272 (286)
T ss_dssp -----------------------CSEEEECGG----GGGGGGSTTCCEEEESSCCHHHHHHHHHHTTSCSCCCSEEEEEE
T ss_pred -----------------------CcEEEEccc----eeccccCCCCCEEEEeCCCCCHHHHHHHHHhCCCCCCCEEEEEE
Confidence 999999999 9999999999999999999999999999999753 468999999
Q ss_pred eCchh
Q 028124 184 VGGEV 188 (213)
Q Consensus 184 ~~~e~ 188 (213)
+++..
T Consensus 273 ~~~~~ 277 (286)
T d1wp9a2 273 AKGTR 277 (286)
T ss_dssp ETTSH
T ss_pred eCCCH
Confidence 87643
No 11
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.89 E-value=2e-24 Score=166.48 Aligned_cols=125 Identities=17% Similarity=0.189 Sum_probs=98.4
Q ss_pred CCceEEEEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHH
Q 028124 20 SQPRHFYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEE 99 (213)
Q Consensus 20 ~~i~~~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~ 99 (213)
++|++.++..+... ++....-.|+. ..++++||||+|+++|+.|++.|+..| +.+..+||+|+++ +
T Consensus 8 p~I~~~~~~~~~~~-~~~~~~i~l~~-----~~~~k~IVFc~t~~~ae~la~~L~~~G-~~~~~~H~~~~~~-------~ 73 (138)
T d1jr6a_ 8 PNIEEVALSTTGEI-PFYGKAIPLEV-----IKGGRHLIFCHSKKKCDELAAKLVALG-INAVAYYRGLDVS-------V 73 (138)
T ss_dssp TTEEEEECCBCSSE-ECSSCEECHHH-----HTTSCEEEECSCHHHHHHHHHHHHHHT-CEEEEECTTCCSC-------C
T ss_pred CCeEEEEeccCChh-HHHHhhChHhh-----cCCCCEEEEeCcHHHHHHHHHHHhccc-cchhhhhccchhh-------h
Confidence 46888876655433 21111111333 245799999999999999999999998 8999999999854 4
Q ss_pred HhcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEec----CCCChHHHHHhhccccC-
Q 028124 100 FRHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYE----LPTKKETYIRRMTTCLA- 174 (213)
Q Consensus 100 Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd----~P~~~~~yi~R~GR~~~- 174 (213)
|+++ +.++|||||+ ++||+| ++++.||||| +|.+.++|+||+||+|+
T Consensus 74 ~~~~-----------------------~~~vlvaTd~----~~~GiD-~~v~~Vi~~~~~~~~P~~~~~y~qr~GR~gRg 125 (138)
T d1jr6a_ 74 IPTN-----------------------GDVVVVATDA----LMTGFT-GDFDSVIDCNTSDGKPQDAVSRTQRRGRTGRG 125 (138)
T ss_dssp CTTS-----------------------SCEEEEESSS----SCSSSC-CCBSEEEECSEETTEECCHHHHHHHHTTBCSS
T ss_pred hhhh-----------------------hcceeehhHH----HHhccc-cccceEEEEEecCCCCCCHHHHHhHhccccCC
Confidence 6676 4999999999 999999 9999999965 69999999999999864
Q ss_pred CCCeEEEEEeCch
Q 028124 175 ADGSVINIVVGGE 187 (213)
Q Consensus 175 ~~g~~i~~~~~~e 187 (213)
++| ++.|+.++|
T Consensus 126 ~~G-~~~~i~~~e 137 (138)
T d1jr6a_ 126 KPG-IYRFVAPGE 137 (138)
T ss_dssp SCE-EEEECCSSC
T ss_pred CCc-EEEEEcCCC
Confidence 556 577888765
No 12
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.84 E-value=1.2e-23 Score=175.55 Aligned_cols=126 Identities=13% Similarity=0.157 Sum_probs=100.3
Q ss_pred CceEEEEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHH
Q 028124 21 QPRHFYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEF 100 (213)
Q Consensus 21 ~i~~~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~F 100 (213)
+|...|. ++ +|+..|.++|+.+ +.++||||+|+++|+.|+..|+.. +||+|++.+|.+++++|
T Consensus 3 ~v~d~~~---~~-~~~~~l~~~l~~~------~~~~iif~~~~~~~~~l~~~l~~~-------~hg~~~~~~R~~~~~~f 65 (248)
T d1gkub2 3 NVEDVAV---ND-ESISTLSSILEKL------GTGGIIYARTGEEAEEIYESLKNK-------FRIGIVTATKKGDYEKF 65 (248)
T ss_dssp CEEEEEE---SC-CCTTTTHHHHTTS------CSCEEEEESSHHHHHHHHHTTTTS-------SCEEECTTSSSHHHHHH
T ss_pred CEEEEec---Cc-hHHHHHHHHHHHh------CCCEEEEECCHHHHHHHHHHHHHh-------ccCCCCHHHHHHHHHHH
Confidence 4555553 34 4999999999862 368999999999999999999642 79999999999999999
Q ss_pred hcccccccccccccCCCCCcCCCCCCceeEEEEe----CCCCCcCcCCCCCCC-CCEEEEecCCCChHHHHHhhccc--c
Q 028124 101 RHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVT----DACLPLLSSGESAIS-ARVLINYELPTKKETYIRRMTTC--L 173 (213)
Q Consensus 101 r~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~T----d~~~~~~~rGld~~~-v~~VI~yd~P~~~~~yi~R~GR~--~ 173 (213)
++|+ +++|||| ++ ++||+|+|+ |++|||||+|+ |.||+||+ .
T Consensus 66 ~~g~-----------------------~~vLVaT~a~~~v----~~rGlDip~~v~~VI~~d~P~----~~~r~gR~~R~ 114 (248)
T d1gkub2 66 VEGE-----------------------IDHLIGTAHYYGT----LVRGLDLPERIRFAVFVGCPS----FRVTIEDIDSL 114 (248)
T ss_dssp HHTS-----------------------CSEEEEECC----------CCSCCTTTCCEEEEESCCE----EEEECSCGGGS
T ss_pred HhCC-----------------------CeEEEEeccccch----hhhccCccccccEEEEeCCCc----chhhhhhhhcc
Confidence 9986 9999999 78 999999997 99999999995 88999997 4
Q ss_pred CCCCeEEEEEeCchhHHHHHH
Q 028124 174 AADGSVINIVVGGEVVTLRSM 194 (213)
Q Consensus 174 ~~~g~~i~~~~~~e~~~~~~l 194 (213)
|+.|.++.++...+......+
T Consensus 115 g~~~~~~~~~~~~~~~~~~~l 135 (248)
T d1gkub2 115 SPQMVKLLAYLYRNVDEIERL 135 (248)
T ss_dssp CHHHHHHHHTTTSCHHHHHTT
T ss_pred CcceEeeeeccHhhHHHHHHH
Confidence 556777777766555444433
No 13
>d2fwra1 c.37.1.19 (A:257-456) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.82 E-value=8.5e-21 Score=152.99 Aligned_cols=116 Identities=20% Similarity=0.273 Sum_probs=100.9
Q ss_pred chHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhccccccccccc
Q 028124 33 QFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHTAMKWNQKVT 112 (213)
Q Consensus 33 ~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~~~ 112 (213)
..|++.|.++++. .++.++||||++...++.|++.|. +..+||+++..+|..++++|++|+
T Consensus 78 ~~K~~~l~~ll~~-----~~~~k~lvf~~~~~~~~~l~~~l~------~~~i~g~~~~~~R~~~l~~F~~~~-------- 138 (200)
T d2fwra1 78 KNKIRKLREILER-----HRKDKIIIFTRHNELVYRISKVFL------IPAITHRTSREEREEILEGFRTGR-------- 138 (200)
T ss_dssp SHHHHHHHHHHHH-----TSSSCBCCBCSCHHHHHHHHHHTT------CCBCCSSSCSHHHHTHHHHHHHSS--------
T ss_pred HHHHHHHHHHHHh-----CCCCcEEEEeCcHHHHHHHHhhcC------cceeeCCCCHHHHHHHHHHhhcCC--------
Confidence 3599999999987 456899999999999999988873 234799999999999999999985
Q ss_pred ccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhccccCC-----CCeEEEEEeCc
Q 028124 113 EQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPTKKETYIRRMTTCLAA-----DGSVINIVVGG 186 (213)
Q Consensus 113 ~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR~~~~-----~g~~i~~~~~~ 186 (213)
.++||+|++ +++|+|+|.+++||+||+|+++..|+||+||+++. ...++.|+..+
T Consensus 139 ---------------~~vLv~~~~----~~~Gidl~~~~~vi~~~~~~s~~~~~Q~iGR~~R~~~~k~~~~i~~~v~~~ 198 (200)
T d2fwra1 139 ---------------FRAIVSSQV----LDEGIDVPDANVGVIMSGSGSAREYIQRLGRILRPSKGKKEAVLYELISRG 198 (200)
T ss_dssp ---------------CSBCBCSSC----CCSSSCSCCBSEEEEECCSSCCHHHHHHHHHSBCCCTTTCCEEEEEEEECS
T ss_pred ---------------eeeeeecch----hhcccCCCCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCCcEEEEEEEecCC
Confidence 889999999 99999999999999999999999999999996322 35677787654
No 14
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.79 E-value=1.7e-19 Score=146.42 Aligned_cols=110 Identities=20% Similarity=0.261 Sum_probs=94.1
Q ss_pred CCcEEEEeCchHHHHHHHHHHhccC----C-------------------------ceEEEecCCCCHHHHHHHHHHHhcc
Q 028124 53 GLPMIVCCSSRDELDAVCSAVSNLA----D-------------------------ISFSSLHSDLAETERTLILEEFRHT 103 (213)
Q Consensus 53 ~~~~IIF~~~~~~~~~l~~~L~~~~----~-------------------------~~~~~lhg~~~~~~R~~~l~~Fr~g 103 (213)
+.++||||+|++.|+.+|..|.... . ..+..+||+|++++|..+.+.|++|
T Consensus 40 ~~~~LVF~~sRk~~~~~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GIa~hh~~l~~~~r~~ie~~f~~g 119 (201)
T d2p6ra4 40 NGGVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLNGQRRVVEDAFRRG 119 (201)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHHHHTTCCCSSHHHHHHTTCCSHHHHHHHHHHHTTCCEECTTSCHHHHHHHHHHHHTT
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhhhhhHHHHHHHhccHHHHHHHhhhhhHHHHHHHHhCC
Confidence 5799999999999998888886520 0 0167899999999999999999998
Q ss_pred cccccccccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEE-------ecCCCChHHHHHhhccccC--
Q 028124 104 AMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLIN-------YELPTKKETYIRRMTTCLA-- 174 (213)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~-------yd~P~~~~~yi~R~GR~~~-- 174 (213)
. +++||||+. +++|+|+|..++||+ ++.|.+..+|+||+||+|+
T Consensus 120 ~-----------------------i~vlvaT~~----l~~Gin~p~~~vvi~~~~~~d~~~~~~~~~~~~q~~GRAGR~g 172 (201)
T d2p6ra4 120 N-----------------------IKVVVATPT----LAAGVNLPARRVIVRSLYRFDGYSKRIKVSEYKQMAGRAGRPG 172 (201)
T ss_dssp S-----------------------CCEEEECST----TTSSSCCCBSEEEECCSEEESSSEEECCHHHHHHHHTTBSCTT
T ss_pred C-----------------------ceEEEechH----HHhhcCCCCceEEEecceeccCCcCCCCHHHHHHHhcccCCCC
Confidence 5 999999999 999999999999996 7888999999999999864
Q ss_pred --CCCeEEEEEeCchhH
Q 028124 175 --ADGSVINIVVGGEVV 189 (213)
Q Consensus 175 --~~g~~i~~~~~~e~~ 189 (213)
..|.++.++.+.+..
T Consensus 173 ~~~~G~~~l~~~~~~~~ 189 (201)
T d2p6ra4 173 MDERGEAIIIVGKRDRE 189 (201)
T ss_dssp TCSCEEEEEECCGGGHH
T ss_pred CCCeeEEEEEeCCCChH
Confidence 358888888776543
No 15
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.79 E-value=8.8e-21 Score=161.59 Aligned_cols=104 Identities=13% Similarity=0.090 Sum_probs=87.5
Q ss_pred CCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHH----------HHHHHHHhcccccccccccccCCCCCcCC
Q 028124 53 GLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETER----------TLILEEFRHTAMKWNQKVTEQSGDESETG 122 (213)
Q Consensus 53 ~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R----------~~~l~~Fr~g~~~~~~~~~~~~~~~~~~~ 122 (213)
+.++||||+|+++|+.|+..|++.| +++..+||+++++.| ...+++|+.|+
T Consensus 36 ggk~LVFcnSR~~aE~La~~L~~~G-i~a~~~Hgglsq~~R~~~gd~~i~~~~aLe~f~~G~------------------ 96 (299)
T d1a1va2 36 GGRHLIFCHSKKKCDELAAKLVALG-INAVAYYRGLDVSVIPTSGDVVVVATDALMTGFTGD------------------ 96 (299)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHTT-CCEEEECTTSCGGGSCSSSSEEEEECTTC---CCCC------------------
T ss_pred CCCEEEECCcHHHHHHHHHHHHHCC-CCEEEEeCCchHHHHHhccchHHHHHHHHHHHhcCC------------------
Confidence 4799999999999999999999998 899999999998876 45778888874
Q ss_pred CCCCceeEEEEeCCCCCcCcC---CCCCCCCCEEEEecCCCChHHHHHhhccccCCCCeEEEEEe
Q 028124 123 KDEHKSHMIVVTDACLPLLSS---GESAISARVLINYELPTKKETYIRRMTTCLAADGSVINIVV 184 (213)
Q Consensus 123 ~~~~~~~iLV~Td~~~~~~~r---Gld~~~v~~VI~yd~P~~~~~yi~R~GR~~~~~g~~i~~~~ 184 (213)
.+++|+|++ +++ |+|++.+.+|||||+|.|.++|+||+||+|+..+-.++++.
T Consensus 97 -----~dvVVaT~~----~a~g~~giDid~V~~VI~~d~P~SvesyIQRiGRTGRGr~G~~~~l~ 152 (299)
T d1a1va2 97 -----FDSVIDCNT----CVTQTVDFSLDPTFTIETTTLPQDAVSRTQRRGRTGRGKPGIYRFVA 152 (299)
T ss_dssp -----BSEEEECCE----EEEEEEECCCSSSCEEEEEEEECBHHHHHHHHTTBCSSSCEEEEESC
T ss_pred -----CcEEEEEee----hhccCCCCCCCcceEEEeCCCCCCHHHHHhhccccCCCCCceEEEEe
Confidence 999999999 998 66777788999999999999999999998765444555553
No 16
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.74 E-value=2.7e-19 Score=145.96 Aligned_cols=133 Identities=12% Similarity=0.124 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHH--------HHHHHHhcc--CCceEEEecCCCCHHHHHHHHHHHhccc
Q 028124 35 KMETLVELLHLVVAGRRPGLPMIVCCSSRDELD--------AVCSAVSNL--ADISFSSLHSDLAETERTLILEEFRHTA 104 (213)
Q Consensus 35 K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~--------~l~~~L~~~--~~~~~~~lhg~~~~~~R~~~l~~Fr~g~ 104 (213)
|.+.+.+.++.- -..+.++.+.|+..+..+ ..++.|.+. +++++..+||.|++++|.+++++|++|+
T Consensus 14 ~~~~v~~~I~~e---l~~g~QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~~F~~g~ 90 (206)
T d1gm5a4 14 RVNEVYEFVRQE---VMRGGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEGR 90 (206)
T ss_dssp THHHHHHHHHHH---TTTSCCBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHHHHTTTS
T ss_pred cHHHHHHHHHHH---HHcCCCEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHHHHHCCC
Confidence 555566666442 246789999998665443 344555432 4578899999999999999999999985
Q ss_pred ccccccccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCCC-hHHHHHhhccc--cCCCCeEEE
Q 028124 105 MKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPTK-KETYIRRMTTC--LAADGSVIN 181 (213)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~~-~~~yi~R~GR~--~~~~g~~i~ 181 (213)
++|||||++ .++|+|+|+|++||+|+.|.. .+.|.|..||+ +++.|.|+.
T Consensus 91 -----------------------~~iLVaTtV----iE~GIDip~a~~iii~~a~~fglsqlhQlrGRvGR~~~~~~~~l 143 (206)
T d1gm5a4 91 -----------------------YDILVSTTV----IEVGIDVPRANVMVIENPERFGLAQLHQLRGRVGRGGQEAYCFL 143 (206)
T ss_dssp -----------------------SSBCCCSSC----CCSCSCCTTCCEEEBCSCSSSCTTHHHHHHHTSCCSSTTCEEEC
T ss_pred -----------------------EEEEEEehh----hhccccccCCcEEEEEccCCccHHHHHhhhhheeeccccceeEe
Confidence 999999999 999999999999999999985 55555557995 677899999
Q ss_pred EEeCchhHHHHHHHHH
Q 028124 182 IVVGGEVVTLRSMEES 197 (213)
Q Consensus 182 ~~~~~e~~~~~~le~~ 197 (213)
++.+.+....++++..
T Consensus 144 ~~~~~~~~~~~rl~~~ 159 (206)
T d1gm5a4 144 VVGDVGEEAMERLRFF 159 (206)
T ss_dssp CCCSCCHHHHHHHHHH
T ss_pred eeccccccchhhhhhc
Confidence 9987655555555443
No 17
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.70 E-value=1.2e-16 Score=130.08 Aligned_cols=135 Identities=12% Similarity=0.139 Sum_probs=108.8
Q ss_pred CCCCCCceEEEEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhcc-CCceEEEecCCCCHHHHH
Q 028124 16 PSHFSQPRHFYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNL-ADISFSSLHSDLAETERT 94 (213)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~-~~~~~~~lhg~~~~~~R~ 94 (213)
|..+..|+.++.. . + +..+...+.+++ ..+.|+.+.||..+..+.+++.+++. +++++..+||.|+++++.
T Consensus 2 P~gR~pI~T~v~~--~-~-~~~i~~~I~~El----~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~~eke 73 (211)
T d2eyqa5 2 PARRLAVKTFVRE--Y-D-SMVVREAILREI----LRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELE 73 (211)
T ss_dssp CCBCBCEEEEEEE--C-C-HHHHHHHHHHHH----TTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCHHHHH
T ss_pred cccCcCeEEEEeC--C-C-HHHHHHHHHHHH----HcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCHHHHH
Confidence 5556667775432 2 2 333433444453 46899999999999999999999764 668999999999999999
Q ss_pred HHHHHHhcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCC-ChHHHHHhhccc-
Q 028124 95 LILEEFRHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPT-KKETYIRRMTTC- 172 (213)
Q Consensus 95 ~~l~~Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~-~~~~yi~R~GR~- 172 (213)
+++.+|++|+ ++|||||.+ .+.|+|+|+++++|.++.++ -.+.+.|--||.
T Consensus 74 ~im~~F~~g~-----------------------~~ILv~Ttv----IEvGiDvpnA~~iiI~~a~rfGLaQLhQLRGRVG 126 (211)
T d2eyqa5 74 RVMNDFHHQR-----------------------FNVLVCTTI----IETGIDIPTANTIIIERADHFGLAQLHQLRGRVG 126 (211)
T ss_dssp HHHHHHHTTS-----------------------CCEEEESST----TGGGSCCTTEEEEEETTTTSSCHHHHHHHHTTCC
T ss_pred HHHHHHHcCC-----------------------cceEEEehh----hhhccCCCCCcEEEEecchhccccccccccceee
Confidence 9999999985 999999999 99999999999999999997 566666666995
Q ss_pred -cCCCCeEEEEEeC
Q 028124 173 -LAADGSVINIVVG 185 (213)
Q Consensus 173 -~~~~g~~i~~~~~ 185 (213)
++..|.|+.+...
T Consensus 127 R~~~~s~c~l~~~~ 140 (211)
T d2eyqa5 127 RSHHQAYAWLLTPH 140 (211)
T ss_dssp BTTBCEEEEEEECC
T ss_pred ecCccceEEEEecC
Confidence 5667999998864
No 18
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=99.64 E-value=1.7e-15 Score=131.90 Aligned_cols=140 Identities=15% Similarity=0.160 Sum_probs=114.8
Q ss_pred chHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhccccccccccc
Q 028124 33 QFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHTAMKWNQKVT 112 (213)
Q Consensus 33 ~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~~~ 112 (213)
..|+..|.++|+.... .++.|+|||++...+.+.|...|...| +....++|+++..+|..++++|+++.
T Consensus 100 S~Kl~~L~~ll~~~~~--~~g~KvlIFs~~~~~ld~l~~~l~~~g-~~~~~l~G~~~~~~R~~~i~~F~~~~-------- 168 (346)
T d1z3ix1 100 SGKMLVLDYILAMTRT--TTSDKVVLVSNYTQTLDLFEKLCRNRR-YLYVRLDGTMSIKKRAKIVERFNNPS-------- 168 (346)
T ss_dssp SHHHHHHHHHHHHHHH--HCCCEEEEEESCHHHHHHHHHHHHHHT-CCEEEECSSCCHHHHHHHHHHHHSTT--------
T ss_pred CHHHHHHHHHHHHHHH--hcCCceeEEeehhhhhHHHHHHHhhhh-ccccccccchhHHHHHHHHHhhhccc--------
Confidence 3499999999976432 357899999999999999999999987 89999999999999999999999874
Q ss_pred ccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhccc--cCCC--CeEEEEEeCc--
Q 028124 113 EQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPTKKETYIRRMTTC--LAAD--GSVINIVVGG-- 186 (213)
Q Consensus 113 ~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR~--~~~~--g~~i~~~~~~-- 186 (213)
.+..-+|++|.+ .+.|+|++.++.||+||++|++..+.|++||+ -|+. -.++.|+..+
T Consensus 169 ------------~~~~vlLls~~a----gg~GlnL~~a~~vi~~d~~wnp~~~~Qa~~R~~R~GQ~~~V~v~rli~~~Ti 232 (346)
T d1z3ix1 169 ------------SPEFIFMLSSKA----GGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTI 232 (346)
T ss_dssp ------------CCCCEEEEEGGG----SCTTCCCTTEEEEEECSCCSSHHHHHHHHTTSSSTTCCSCEEEEEEEETTSH
T ss_pred ------------ccceeeeecchh----hhhccccccceEEEEecCCCccchHhHhhhcccccCCCCceEEEEEEeCCCH
Confidence 011237778888 99999999999999999999999999999996 3443 4667777776
Q ss_pred hhHHHHHHHHHhc
Q 028124 187 EVVTLRSMEESLG 199 (213)
Q Consensus 187 e~~~~~~le~~l~ 199 (213)
|...++.+.....
T Consensus 233 Ee~i~~~~~~K~~ 245 (346)
T d1z3ix1 233 EEKILQRQAHKKA 245 (346)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5556666655543
No 19
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.64 E-value=1.1e-15 Score=126.20 Aligned_cols=136 Identities=15% Similarity=0.139 Sum_probs=102.8
Q ss_pred chHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhccccccccccc
Q 028124 33 QFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHTAMKWNQKVT 112 (213)
Q Consensus 33 ~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~~~ 112 (213)
..|+..|.+++..... ++.++||||+.....+.+...|....++.+..+||+++..+|..++++|.++.
T Consensus 68 S~K~~~l~~~l~~~~~---~g~kviIFs~~~~~~~~l~~~l~~~~~~~~~~i~G~~~~~~R~~~i~~F~~~~-------- 136 (244)
T d1z5za1 68 SGKMIRTMEIIEEALD---EGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNP-------- 136 (244)
T ss_dssp CHHHHHHHHHHHHHHH---TTCCEEEEESCHHHHHHHHHHHHHHHCSCCCEECTTSCHHHHHHHHHHHHHCT--------
T ss_pred hhHHHHHHHHHHhhcc---cccceEEEeeceehHHHHHHHHHhhccceEEEEecccchhccchhhhhhhccc--------
Confidence 3499999999987533 57899999999999999999997652278888999999999999999999863
Q ss_pred ccCCCCCcCCCCCCceeEEEE-eCCCCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhccc--cC--CCCeEEEEEeCc-
Q 028124 113 EQSGDESETGKDEHKSHMIVV-TDACLPLLSSGESAISARVLINYELPTKKETYIRRMTTC--LA--ADGSVINIVVGG- 186 (213)
Q Consensus 113 ~~~~~~~~~~~~~~~~~iLV~-Td~~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR~--~~--~~g~~i~~~~~~- 186 (213)
...+|++ |.+ .+.|+|++.+++||+||+||++..+.|++||+ .| ++-.++.|+..+
T Consensus 137 --------------~~~vll~~~~~----~g~Glnl~~a~~vi~~~~~wn~~~~~Qa~~R~~R~Gq~~~v~i~~l~~~~T 198 (244)
T d1z5za1 137 --------------SVKFIVLSVKA----GGFGINLTSANRVIHFDRWWNPAVEDQATDRVYRIGQTRNVIVHKLISVGT 198 (244)
T ss_dssp --------------TCCEEEEECCT----TCCCCCCTTCSEEEECSCCSCTTTC--------------CCEEEEEEETTS
T ss_pred --------------cchhccccccc----cccccccchhhhhhhcCchhhhHHHhhhcceeeecCCCCceEEEEEeeCCC
Confidence 3566655 567 89999999999999999999999999999995 33 335777788776
Q ss_pred -hhHHHHHHHHH
Q 028124 187 -EVVTLRSMEES 197 (213)
Q Consensus 187 -e~~~~~~le~~ 197 (213)
|...+..++..
T Consensus 199 iee~i~~~~~~K 210 (244)
T d1z5za1 199 LEEKIDQLLAFK 210 (244)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH
Confidence 44455555443
No 20
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=99.40 E-value=3.3e-13 Score=112.59 Aligned_cols=101 Identities=14% Similarity=0.078 Sum_probs=80.5
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhcccccccccccccCCCCCcCCCCCCceeEE
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHTAMKWNQKVTEQSGDESETGKDEHKSHMI 131 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~iL 131 (213)
...+++|||++++.++.+++.|.+.+ +.+..+||++++..+ ..|+++. .+++
T Consensus 177 ~~~~~lvf~~~~~~~~~l~~~L~~~~-~~~~~l~~~~~~~~~----~~~~~~~-----------------------~~~l 228 (305)
T d2bmfa2 177 FKGKTVWFVPSIKAGNDIAACLRKNG-KKVIQLSRKTFDSEY----IKTRTND-----------------------WDFV 228 (305)
T ss_dssp SCSCEEEECSCHHHHHHHHHHHHHHT-CCCEECCTTCHHHHG----GGGGTSC-----------------------CSEE
T ss_pred hCCCEEEEeccHHHHHHHHHHHHhCC-CCEEEeCCcChHHHH----hhhhccc-----------------------hhhh
Confidence 46799999999999999999999987 799999999866554 4677764 8999
Q ss_pred EEeCCCCCcCcCCCCCCCCCEEE----------EecC----------CCChHHHHHhhcccc--CCCCeEEEEEeC
Q 028124 132 VVTDACLPLLSSGESAISARVLI----------NYEL----------PTKKETYIRRMTTCL--AADGSVINIVVG 185 (213)
Q Consensus 132 V~Td~~~~~~~rGld~~~v~~VI----------~yd~----------P~~~~~yi~R~GR~~--~~~g~~i~~~~~ 185 (213)
|+|++ +++|+|+ +++.|| +||. |-|.++|+||+||+| ++.+....++..
T Consensus 229 vaT~~----~~~G~~~-~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Qr~GR~GR~~~~~~~~~~~~~ 299 (305)
T d2bmfa2 229 VTTDI----SEMGANF-KAERVIDPRRCMKPVILTDGEERVILAGPMPVTHSSAAQRRGRVGRNPKNENDQYIYMG 299 (305)
T ss_dssp EECGG----GGTTCCC-CCSEEEECCEEEEEEEECSSSCEEEEEEEEECCHHHHHHHHTTSSCSSSCCCEEEEECS
T ss_pred hhhHH----HHhcCCC-CccEEEEcCCceeeeEecCCCCceEEeccccCCHHHHhhhhcCcCcCCCCceEEEEECC
Confidence 99999 9999999 455554 4444 457899999999975 444666666543
No 21
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.31 E-value=1.6e-12 Score=110.77 Aligned_cols=99 Identities=11% Similarity=0.082 Sum_probs=76.0
Q ss_pred CCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhcccccccccccccCCCCCcCCCCCCceeEEE
Q 028124 53 GLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHTAMKWNQKVTEQSGDESETGKDEHKSHMIV 132 (213)
Q Consensus 53 ~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV 132 (213)
.++++|||++..+++.++..|++.| .++..+||.++..++. +|++++ .++||
T Consensus 36 ~g~~~~F~~s~~~~~~~a~~L~~~g-~~V~~l~~~~~~~e~~----~~~~~~-----------------------~~~~~ 87 (299)
T d1yksa2 36 KRPTAWFLPSIRAANVMAASLRKAG-KSVVVLNRKTFEREYP----TIKQKK-----------------------PDFIL 87 (299)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHTT-CCEEECCSSSCC------------CC-----------------------CSEEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHHhcC-CeEEEEcCcCcHhHHh----hhhcCC-----------------------cCEEE
Confidence 5799999999999999999999998 7999999999877754 577764 89999
Q ss_pred EeCCCCCcCcCCCCCCCCCEEEEecCC-------------------CChHHHHHhhccccCCCC--eEEEEEe
Q 028124 133 VTDACLPLLSSGESAISARVLINYELP-------------------TKKETYIRRMTTCLAADG--SVINIVV 184 (213)
Q Consensus 133 ~Td~~~~~~~rGld~~~v~~VI~yd~P-------------------~~~~~yi~R~GR~~~~~g--~~i~~~~ 184 (213)
||++ ++.|+|+ ++.+||++.++ -+.++-.||.||+|+..+ .++.++.
T Consensus 88 ~t~~----~~~~~~~-~~~~vid~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~qr~gr~gr~~~~~~~~~~y~ 155 (299)
T d1yksa2 88 ATDI----AEMGANL-CVERVLDCRTAFKPVLVDEGRKVAIKGPLRISASSAAQRRGRIGRNPNRDGDSYYYS 155 (299)
T ss_dssp ESSS----TTCCTTC-CCSEEEECCEEEEEEEETTTTEEEEEEEEECCHHHHHHHHTTSSCCTTCCCEEEEEC
T ss_pred Eech----hhhceec-CceEEEecCceeceeeecCCCCeeEEeeeecCHHHHHHhcccccccCCCceEEEEeC
Confidence 9999 9999999 69999965532 356888999999876543 3444443
No 22
>d1tf5a4 c.37.1.19 (A:396-570) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=98.90 E-value=1.3e-08 Score=79.77 Aligned_cols=124 Identities=14% Similarity=0.147 Sum_probs=97.4
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhccccccccc
Q 028124 31 RLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHTAMKWNQK 110 (213)
Q Consensus 31 ~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~ 110 (213)
..+.|+.++.+.++... ..++|+||+|.|....+.++..|+..+ +....++.....++ .+++. ..|
T Consensus 15 T~~eK~~AIi~eV~~~~---~~grPVLIgT~SIe~SE~ls~~L~~~g-i~h~vLnAk~~~~E-a~II~--~Ag------- 80 (175)
T d1tf5a4 15 TMEGKFKAVAEDVAQRY---MTGQPVLVGTVAVETSELISKLLKNKG-IPHQVLNAKNHERE-AQIIE--EAG------- 80 (175)
T ss_dssp SHHHHHHHHHHHHHHHH---HHTCCEEEEESCHHHHHHHHHHHHTTT-CCCEEECSSCHHHH-HHHHT--TTT-------
T ss_pred CHHHHHHHHHHHHHHHH---hcCCCEEEEeCcHHHHHHHHHHHHHcC-CCceeehhhhHHHH-HHHHH--hcc-------
Confidence 44459999988886643 367999999999999999999999987 89999998754333 33443 222
Q ss_pred ccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCC---CC-----EEEEecCCCChHHHHHhhcccc--CCCCeEE
Q 028124 111 VTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAIS---AR-----VLINYELPTKKETYIRRMTTCL--AADGSVI 180 (213)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~---v~-----~VI~yd~P~~~~~yi~R~GR~~--~~~g~~i 180 (213)
.+-.|.|+|++ ++||.|+.- |. +||.-..|.+..-..|-.||++ |.+|...
T Consensus 81 ---------------~~g~VtIATNm----AGRGtDikl~~~v~~~GGLhVI~t~~~~s~Rid~Ql~GR~gRQGdpGs~~ 141 (175)
T d1tf5a4 81 ---------------QKGAVTIATNM----AGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQ 141 (175)
T ss_dssp ---------------STTCEEEEETT----SSTTCCCCCCTTSGGGTSEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEE
T ss_pred ---------------CCCceeehhhH----HHcCCCccchHHHHhCCCcEEEEeccCcchhHHHHHhcchhhhCCCcccE
Confidence 24679999999 999999842 22 7999999999999999999975 6679998
Q ss_pred EEEeCch
Q 028124 181 NIVVGGE 187 (213)
Q Consensus 181 ~~~~~~e 187 (213)
.|++-+|
T Consensus 142 ~~~sleD 148 (175)
T d1tf5a4 142 FYLSMED 148 (175)
T ss_dssp EEEETTS
T ss_pred EEEEcCH
Confidence 8887654
No 23
>d1nkta4 c.37.1.19 (A:397-615) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.53 E-value=0.0014 Score=51.82 Aligned_cols=125 Identities=11% Similarity=0.106 Sum_probs=93.1
Q ss_pred CcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhccccccccc
Q 028124 31 RLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHTAMKWNQK 110 (213)
Q Consensus 31 ~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~ 110 (213)
....|+.++.+-++... ..++|+||.+.|....+.|+..|.+.+ +...+|+..-. +.=..++.+--.
T Consensus 15 T~~~K~~Avv~ei~~~h---~~GqPVLVGT~SVe~SE~lS~lL~~~g-i~h~vLNAK~h-erEAeIIAqAG~-------- 81 (219)
T d1nkta4 15 TEEAKYIAVVDDVAERY---AKGQPVLIGTTSVERSEYLSRQFTKRR-IPHNVLNAKYH-EQEATIIAVAGR-------- 81 (219)
T ss_dssp CHHHHHHHHHHHHHHHH---HTTCCEEEEESCHHHHHHHHHHHHHTT-CCCEEECSSCH-HHHHHHHHTTTS--------
T ss_pred CHHHHHHHHHHHHHHHH---hcCCCEEEeeCcHHHHHHHHHHHHHhc-cchhccchhhH-HHHHHHHHhccc--------
Confidence 34459999999887653 378999999999999999999999997 89999998643 322445544322
Q ss_pred ccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCC-----------------------------------------
Q 028124 111 VTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAIS----------------------------------------- 149 (213)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~----------------------------------------- 149 (213)
+-.|-|+|++ ++||.|+.=
T Consensus 82 ----------------~GaVTIATNM----AGRGTDI~LGgn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (219)
T d1nkta4 82 ----------------RGGVTVATNM----AGRGTDIVLGGNVDFLTDQRLRERGLDPVETPEEYEAAWHSELPIVKEEA 141 (219)
T ss_dssp ----------------TTCEEEEETT----CSTTCCCCTTCCHHHHHHHHHHHTTCCTTTSHHHHHHHHHHHHHHHHHHT
T ss_pred ----------------CCcEEeeccc----cCCCCceeecCchhhhhHHHhhhcccCcccCHHHHHHHHHHHHHHHHHHH
Confidence 4679999999 999999932
Q ss_pred ------C-----CEEEEecCCCChHHHHHhhcccc--CCCCeEEEEEeCchh
Q 028124 150 ------A-----RVLINYELPTKKETYIRRMTTCL--AADGSVINIVVGGEV 188 (213)
Q Consensus 150 ------v-----~~VI~yd~P~~~~~yi~R~GR~~--~~~g~~i~~~~~~e~ 188 (213)
| =+||--.-..|..-=-|=-||+| |.+|....|++-+|.
T Consensus 142 ~~~~~~V~~~GGL~VIGTErHeSrRIDnQLRGRsGRQGDPGsSrFflSLeDd 193 (219)
T d1nkta4 142 SKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDE 193 (219)
T ss_dssp THHHHHHHHTTSEEEEECSCCSSHHHHHHHHHTSSGGGCCEEEEEEEETTSH
T ss_pred HHHHHHHHhcCCcEEEeccccccccccccccccccccCCCccceeEEeccHH
Confidence 1 16777777766555556568875 557988888876543
No 24
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=96.87 E-value=0.0027 Score=51.74 Aligned_cols=106 Identities=12% Similarity=0.005 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhcc----CCceEEEecCCCCHHHHHHHHHHHhccccccccc
Q 028124 35 KMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNL----ADISFSSLHSDLAETERTLILEEFRHTAMKWNQK 110 (213)
Q Consensus 35 K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~----~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~ 110 (213)
|..+....+.... ..+.++++-++|..-+...++.+++. | +.+..+||+++..+|.+++++.++|+
T Consensus 117 KT~Va~~a~~~~~---~~g~q~~~m~Pt~~La~Qh~~~~~~~f~~~~-~~v~~l~~~~~~~~r~~~~~~~~~g~------ 186 (264)
T d1gm5a3 117 KTVVAQLAILDNY---EAGFQTAFMVPTSILAIQHYRRTVESFSKFN-IHVALLIGATTPSEKEKIKSGLRNGQ------ 186 (264)
T ss_dssp HHHHHHHHHHHHH---HHTSCEEEECSCHHHHHHHHHHHHHHHTCSS-CCEEECCSSSCHHHHHHHHHHHHSSC------
T ss_pred ccHHHHHHHHHHH---hcccceeEEeehHhhhHHHHHHHHHhhhhcc-ccceeeccccchHHHHHHHHHHHCCC------
Confidence 6555555443322 25789999999998888877666543 4 78999999999999999999999985
Q ss_pred ccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhccc
Q 028124 111 VTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPTKKETYIRRMTTC 172 (213)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR~ 172 (213)
++|+|.|-+ ++...+.+.+..+||.-.-.+ -.|-||-+-.
T Consensus 187 -----------------~~iiIGThs---l~~~~~~f~~LglviiDEqH~--fgv~Qr~~l~ 226 (264)
T d1gm5a3 187 -----------------IDVVIGTHA---LIQEDVHFKNLGLVIIDEQHR--FGVKQREALM 226 (264)
T ss_dssp -----------------CCEEEECTT---HHHHCCCCSCCCEEEEESCCC--C-----CCCC
T ss_pred -----------------CCEEEeehH---HhcCCCCccccceeeeccccc--cchhhHHHHH
Confidence 999999998 245578888999988876443 4677876543
No 25
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=96.30 E-value=0.021 Score=45.38 Aligned_cols=114 Identities=17% Similarity=0.035 Sum_probs=87.4
Q ss_pred EEEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhcc----CCceEEEecCCCCHHHHHHHHHHH
Q 028124 25 FYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNL----ADISFSSLHSDLAETERTLILEEF 100 (213)
Q Consensus 25 ~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~----~~~~~~~lhg~~~~~~R~~~l~~F 100 (213)
.++.-+-..=|..+....+.... ..+.++++-+++..-+...++.++++ + +.+..+||.++..+|..+++.+
T Consensus 79 ~LL~GdvGsGKT~V~~~a~~~~~---~~g~qv~~l~Pt~~La~Q~~~~~~~~~~~~~-~~v~~l~~~~~~~~~~~~~~~~ 154 (233)
T d2eyqa3 79 RLVCGDVGFGKTEVAMRAAFLAV---DNHKQVAVLVPTTLLAQQHYDNFRDRFANWP-VRIEMISRFRSAKEQTQILAEV 154 (233)
T ss_dssp EEEECCCCTTTHHHHHHHHHHHH---TTTCEEEEECSSHHHHHHHHHHHHHHSTTTT-CCEEEESTTSCHHHHHHHHHHH
T ss_pred eEEEcCCCCCcHHHHHHHHHHHH---HcCCceEEEccHHHhHHHHHHHHHHHHhhCC-CEEEeccCcccchhHHHHHHHH
Confidence 34443333337777777665433 46899999999999999998888753 5 7899999999999999999999
Q ss_pred hcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhc
Q 028124 101 RHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPTKKETYIRRMT 170 (213)
Q Consensus 101 r~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~G 170 (213)
.+|+ .+++|.|-+ ++...+.+.+..+||--+-.+ -.|-||.+
T Consensus 155 ~~g~-----------------------~~iviGths---~l~~~~~f~~LgLiIiDEeH~--fg~kQ~~~ 196 (233)
T d2eyqa3 155 AEGK-----------------------IDILIGTHK---LLQSDVKFKDLGLLIVDEEHR--FGVRHKER 196 (233)
T ss_dssp HTTC-----------------------CSEEEECTH---HHHSCCCCSSEEEEEEESGGG--SCHHHHHH
T ss_pred hCCC-----------------------CCEEEeehh---hhccCCccccccceeeechhh--hhhHHHHH
Confidence 9985 999999996 144578888999888766443 35566654
No 26
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=92.46 E-value=0.93 Score=34.01 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=67.1
Q ss_pred EEEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhcc---CCceEEEecCCCCHHHHHHHHHHHh
Q 028124 25 FYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNL---ADISFSSLHSDLAETERTLILEEFR 101 (213)
Q Consensus 25 ~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~---~~~~~~~lhg~~~~~~R~~~l~~Fr 101 (213)
.++..+...=|.-...-.+-.... ...+.+++|.|+|++-|..+.+.+... .+..+...+|+.+..++.+.+ +
T Consensus 45 ~iv~a~TGsGKT~~~~l~~~~~~~-~~~~~~~lil~pt~~l~~q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~l---~ 120 (208)
T d1hv8a1 45 IVAQARTGSGKTASFAIPLIELVN-ENNGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKAL---K 120 (208)
T ss_dssp EEEECCSSSSHHHHHHHHHHHHSC-SSSSCCEEEECSCHHHHHHHHHHHHHHHCSSCCCEEEECTTSCHHHHHHHH---H
T ss_pred eeeechhcccccceeecccccccc-cccCcceEEEeeccccchhhhhhhhhhcccCCeEEEEeeCCCChHHHHHhc---C
Confidence 344444444354443333322122 356679999999999999987777653 346888999998877665433 3
Q ss_pred cccccccccccccCCCCCcCCCCCCceeEEEEeCCCCC-cC-cCCCCCCCCCEEEEec
Q 028124 102 HTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLP-LL-SSGESAISARVLINYE 157 (213)
Q Consensus 102 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~-~~-~rGld~~~v~~VI~yd 157 (213)
+ .+|+|+|+.++- .+ ...+++.++.++|--+
T Consensus 121 ~-------------------------~~IlV~TP~~l~~~l~~~~~~~~~l~~lViDE 153 (208)
T d1hv8a1 121 N-------------------------ANIVVGTPGRILDHINRGTLNLKNVKYFILDE 153 (208)
T ss_dssp T-------------------------CSEEEECHHHHHHHHHTTCSCTTSCCEEEEET
T ss_pred C-------------------------CCEEEEChHHHHHHHHcCCCCcccCcEEEEEC
Confidence 3 779999964210 02 4567899999988754
No 27
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.65 E-value=0.49 Score=36.41 Aligned_cols=104 Identities=9% Similarity=0.019 Sum_probs=68.1
Q ss_pred EEEEecCcchH-HHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhcc---CCceEEEecCCCCHHHHHHHHHHH
Q 028124 25 FYVAVDRLQFK-METLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNL---ADISFSSLHSDLAETERTLILEEF 100 (213)
Q Consensus 25 ~~~~~~~~~~K-~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~---~~~~~~~lhg~~~~~~R~~~l~~F 100 (213)
..+..+...=| +..+.-++..+.. .....+++|.|+|++-|..+++.+... .++++..+.|+.+..+....+
T Consensus 57 vi~~a~TGSGKTlayllPil~~l~~-~~~~~~~lil~PtreLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~l--- 132 (222)
T d2j0sa1 57 VIAQSQSGTGKTATFSISVLQCLDI-QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKL--- 132 (222)
T ss_dssp EEEECCTTSSHHHHHHHHHHHTCCT-TSCSCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHHH---
T ss_pred eEEEcCcchhhhhhhcccccccccc-cccCceeEEecchHHHHHHHHHHHHHHhCccceeEEEEeecccchhhHHHh---
Confidence 44444443323 3444445554322 345678999999999999998877654 237888999998776654443
Q ss_pred hcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCC--cCcCCCCCCCCCEEEEe
Q 028124 101 RHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLP--LLSSGESAISARVLINY 156 (213)
Q Consensus 101 r~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~--~~~rGld~~~v~~VI~y 156 (213)
+.+ .+|+|+|+-++- .....+++.++.++|--
T Consensus 133 ~~~------------------------~~Ilv~TPgrl~~~~~~~~~~~~~l~~lVlD 166 (222)
T d2j0sa1 133 DYG------------------------QHVVAGTPGRVFDMIRRRSLRTRAIKMLVLD 166 (222)
T ss_dssp HHC------------------------CSEEEECHHHHHHHHHTTSSCCTTCCEEEEE
T ss_pred ccC------------------------CeEEeCCCCcHHhcccccccccccceeeeec
Confidence 444 789999975210 02677888999998863
No 28
>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=88.03 E-value=0.23 Score=34.33 Aligned_cols=38 Identities=11% Similarity=0.069 Sum_probs=33.2
Q ss_pred CCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCC
Q 028124 51 RPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDL 88 (213)
Q Consensus 51 ~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~ 88 (213)
.+..++|+||++-.++...+..|...|+-.+..+.|++
T Consensus 70 ~~~~~iv~~C~~G~rs~~a~~~L~~~G~~nv~~l~GG~ 107 (119)
T d1tq1a_ 70 GQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGY 107 (119)
T ss_dssp CTTSSEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCH
T ss_pred CCCcEEEEEcCCcCcHHHHHHHHHhcccCCeEEecChH
Confidence 45789999999999999999999999854688899997
No 29
>d2eyqa2 c.37.1.19 (A:349-465) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=87.91 E-value=0.24 Score=34.50 Aligned_cols=76 Identities=12% Similarity=0.110 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhccccccccccccc
Q 028124 35 KMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHTAMKWNQKVTEQ 114 (213)
Q Consensus 35 K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~~~~~ 114 (213)
-++.|...++. ...++||.|.+...++.|.+.|+..+ +.+..+.+.- +|..+
T Consensus 22 p~~~L~~~i~~------~~~~Vli~a~s~g~~erl~e~L~~~~-i~~~~~~~~~----------~~~~~----------- 73 (117)
T d2eyqa2 22 PLDALRKFLET------FDGPVVFSVESEGRREALGELLARIK-IAPQRIMRLD----------EASDR----------- 73 (117)
T ss_dssp TTHHHHHHHTT------CCSCCCEEESSHHHHHHHHHHHGGGT-CCCEECSSGG----------GCCTT-----------
T ss_pred HHHHHHHHHHh------CCCeEEEEECCccHHHHHHHHHHHcC-CCceEecChh----------hhcCc-----------
Confidence 45556666544 35689999999999999999999987 7765555431 12222
Q ss_pred CCCCCcCCCCCCceeEEEEeCCCCCcCcCCCCCCCCCEEEEe
Q 028124 115 SGDESETGKDEHKSHMIVVTDACLPLLSSGESAISARVLINY 156 (213)
Q Consensus 115 ~~~~~~~~~~~~~~~iLV~Td~~~~~~~rGld~~~v~~VI~y 156 (213)
.+.|+... +..|.-+++..++|--
T Consensus 74 --------------~~~i~~~~----l~~GF~~~~~~l~vIt 97 (117)
T d2eyqa2 74 --------------GRYLMIGA----AEHGFVDTVRNLALIC 97 (117)
T ss_dssp --------------CCEEEECC----CCSCEEETTTTEEEEE
T ss_pred --------------eEEEEEec----CccccccCCCCEEEEE
Confidence 23444455 7999999999988864
No 30
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.82 E-value=2.2 Score=31.84 Aligned_cols=106 Identities=10% Similarity=0.123 Sum_probs=66.7
Q ss_pred EEEEecCcchH-HHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhcc----CCceEEEecCCCCHHHHHHHHHH
Q 028124 25 FYVAVDRLQFK-METLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNL----ADISFSSLHSDLAETERTLILEE 99 (213)
Q Consensus 25 ~~~~~~~~~~K-~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~----~~~~~~~lhg~~~~~~R~~~l~~ 99 (213)
..+..+...=| +..+.-++..+.. .....+++|.|+++.-+..+.+.+... +.+....++|+.+.......
T Consensus 41 vl~~A~TGsGKTla~~lp~l~~~~~-~~~~~~~lil~PtreL~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--- 116 (207)
T d1t6na_ 41 VLCQAKSGMGKTAVFVLATLQQLEP-VTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEV--- 116 (207)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHCCC-CTTCCCEEEECSCHHHHHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHHHH---
T ss_pred eEEEeccccccccccccceeeeecc-cCCCceEEEEeccchhhHHHHHHHHHHHhhCCCceeEEEeccccHHHHHHH---
Confidence 44444443324 3344445555322 345678999999999999888887654 33567888888876654332
Q ss_pred HhcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCc--CcCCCCCCCCCEEEEec
Q 028124 100 FRHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPL--LSSGESAISARVLINYE 157 (213)
Q Consensus 100 Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~--~~rGld~~~v~~VI~yd 157 (213)
+... ..++||+|+.++-. -...+++.++.++|--+
T Consensus 117 l~~~-----------------------~~~ilI~TP~rl~~~~~~~~~~l~~l~~lVlDE 153 (207)
T d1t6na_ 117 LKKN-----------------------CPHIVVGTPGRILALARNKSLNLKHIKHFILDE 153 (207)
T ss_dssp HHHS-----------------------CCSEEEECHHHHHHHHHTTSSCCTTCCEEEEES
T ss_pred HHhc-----------------------CCCEEEeCcchhhhhccCCceeccccceeehhh
Confidence 2222 27899999852111 13567889999888644
No 31
>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}
Probab=87.56 E-value=0.44 Score=32.19 Aligned_cols=49 Identities=12% Similarity=0.156 Sum_probs=38.7
Q ss_pred HHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCC
Q 028124 37 ETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLA 89 (213)
Q Consensus 37 ~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~ 89 (213)
..|...+.. ..+.+++|+||.+-..+...+..|...|+-.+..+.|++.
T Consensus 46 ~~l~~~~~~----~~~~~~ivv~c~~g~rs~~~a~~L~~~G~~~v~~l~GG~~ 94 (108)
T d1gmxa_ 46 DTLGAFMRD----NDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFE 94 (108)
T ss_dssp HHHHHHHHH----SCTTSCEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHH
T ss_pred hhHHHHhhh----ccccCcccccCCCChHHHHHHHHHHHcCCCCEEEEcChHH
Confidence 445555655 2467899999999999999999999998446888999863
No 32
>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=84.77 E-value=0.59 Score=32.65 Aligned_cols=38 Identities=8% Similarity=0.057 Sum_probs=33.7
Q ss_pred CCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCC
Q 028124 51 RPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLA 89 (213)
Q Consensus 51 ~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~ 89 (213)
.+.+++++||.+-..+...+..|++.| +.+..+.|++.
T Consensus 78 ~~~~~ivl~C~~G~rS~~aa~~L~~~G-~~v~~l~GG~~ 115 (130)
T d1yt8a4 78 VRGARLVLVDDDGVRANMSASWLAQMG-WQVAVLDGLSE 115 (130)
T ss_dssp SBTCEEEEECSSSSHHHHHHHHHHHTT-CEEEEECSCCG
T ss_pred CccceEEeecCCCccHHHHHHHHHHcC-CCeEEEcCchH
Confidence 467899999999999999999999998 69999999873
No 33
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=83.68 E-value=1.1 Score=33.87 Aligned_cols=77 Identities=10% Similarity=0.132 Sum_probs=54.1
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhcc----C---CceEEEecCCCCHHHHHHHHHHHhcccccccccccccCCCCCcCCCC
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNL----A---DISFSSLHSDLAETERTLILEEFRHTAMKWNQKVTEQSGDESETGKD 124 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~----~---~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~~~~~~~~~~~~~~~ 124 (213)
++.++||.++++.-++.+++.+++. + ......++++.+..++.+.++....
T Consensus 85 ~~~rvliv~Pt~~La~Q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------------------- 142 (237)
T d1gkub1 85 KGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRN---------------------- 142 (237)
T ss_dssp TSCCEEEEESCHHHHHHHHHHHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGGG----------------------
T ss_pred hcCeEEEEeccHHHHHHHHHHHHHHHHHcCCceEEEEeeeecccchhhhhhhhccccc----------------------
Confidence 5679999999999999998888653 1 1335667788877777766655544
Q ss_pred CCceeEEEEeCCCCCcCcCC-CCCCCCCEEEEe
Q 028124 125 EHKSHMIVVTDACLPLLSSG-ESAISARVLINY 156 (213)
Q Consensus 125 ~~~~~iLV~Td~~~~~~~rG-ld~~~v~~VI~y 156 (213)
.+|+|+|... +.+. .++.++++||.-
T Consensus 143 ---~~Ilv~Tp~~---l~~~~~~~~~~~~vVvD 169 (237)
T d1gkub1 143 ---FKIVITTTQF---LSKHYRELGHFDFIFVD 169 (237)
T ss_dssp ---CSEEEEEHHH---HHHCSTTSCCCSEEEES
T ss_pred ---cceeccChHH---HHHhhhhcCCCCEEEEE
Confidence 6799999641 3332 355678888763
No 34
>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=83.56 E-value=1.1 Score=30.24 Aligned_cols=39 Identities=21% Similarity=0.213 Sum_probs=32.8
Q ss_pred CCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCC
Q 028124 51 RPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLA 89 (213)
Q Consensus 51 ~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~ 89 (213)
....++|+||++-.++...+..|...|+-.+..+.|++.
T Consensus 80 ~~~~~ii~yC~sG~~A~~~~~~L~~lG~~~v~~y~Gs~~ 118 (120)
T d1urha2 80 SYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWS 118 (120)
T ss_dssp CSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCC
T ss_pred CccCceEEEccchhHHHHHHHHHHHcCCCCceEcCCChh
Confidence 567899999999999999999998888546888888875
No 35
>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}
Probab=77.65 E-value=1.1 Score=31.67 Aligned_cols=38 Identities=11% Similarity=0.243 Sum_probs=32.8
Q ss_pred CCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCC
Q 028124 51 RPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDL 88 (213)
Q Consensus 51 ~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~ 88 (213)
.+..++|+||++-..+...+..|...|+-.+..+.|++
T Consensus 80 ~~~~~ivvyC~~G~rs~~aa~~L~~~G~~nV~~l~GG~ 117 (137)
T d1qxna_ 80 DPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGM 117 (137)
T ss_dssp CTTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCH
T ss_pred CcccceeeeecccchHHHHHHHHHHcCCCcEEEecCHH
Confidence 45688999999999999999999999844688899995
No 36
>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=76.92 E-value=1.8 Score=30.33 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=31.2
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCce-EEEecCCC
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADIS-FSSLHSDL 88 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~-~~~lhg~~ 88 (213)
+..++++||.+-..+...+..|...|.-. +..|.|++
T Consensus 79 ~~~~iV~~C~~g~rs~~aa~~L~~~G~~~~V~~L~GG~ 116 (136)
T d1yt8a1 79 PRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGT 116 (136)
T ss_dssp TTSEEEEECSSSHHHHHHHHHHHHTTCSSCEEEETTHH
T ss_pred ccceEEEEcCCCCchHHHHHHHHHcCCCceEEEeCCcH
Confidence 45789999999999999999999988433 78899985
No 37
>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=75.27 E-value=1.5 Score=30.81 Aligned_cols=48 Identities=8% Similarity=0.123 Sum_probs=35.7
Q ss_pred HHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCC
Q 028124 39 LVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDL 88 (213)
Q Consensus 39 L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~ 88 (213)
|.++++.. + -.+.+++|+||++-.++...+..|...|+-.+..+.|++
T Consensus 76 l~~~~~~~-g-i~~~~~vV~yC~~G~~a~~~~~~l~~~G~~~v~~ydGg~ 123 (136)
T d1e0ca2 76 IAGRLEEL-G-ITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSW 123 (136)
T ss_dssp HHHHHHHT-T-CCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHH
T ss_pred Hhhhhhhc-c-cCCCCceEEeCCChHHHHHHHHHHHHcCCCCcEEecCCH
Confidence 45555542 1 256789999999988888888899888854678888874
No 38
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.34 E-value=7.7 Score=28.55 Aligned_cols=93 Identities=10% Similarity=0.120 Sum_probs=60.6
Q ss_pred HHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhcc----CCceEEEecCCCCHHHHHHHHHHHhcccccccccc
Q 028124 36 METLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNL----ADISFSSLHSDLAETERTLILEEFRHTAMKWNQKV 111 (213)
Q Consensus 36 ~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~----~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~~ 111 (213)
+..+.-++..+.. ..+..+++|.|+++.-+..+.+.+... .........|+.+..++...+ +.
T Consensus 55 layllP~l~~~~~-~~~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l---~~--------- 121 (206)
T d1veca_ 55 GAYLIPLLERLDL-KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRL---DD--------- 121 (206)
T ss_dssp HHHHHHHHHHCCT-TSCSCCEEEECSCHHHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHHHT---TS---------
T ss_pred cccccchhhcccc-cccCcceEEEeecchhhHHHHHHHHHHhhcccCcccccccCCccHHHHHHHH---Hh---------
Confidence 3444445554322 456678999999999999988877543 225677788887766654333 33
Q ss_pred cccCCCCCcCCCCCCceeEEEEeCCCCC--cCcCCCCCCCCCEEEEe
Q 028124 112 TEQSGDESETGKDEHKSHMIVVTDACLP--LLSSGESAISARVLINY 156 (213)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~iLV~Td~~~~--~~~rGld~~~v~~VI~y 156 (213)
..+++|+|+.++- .....+++.++.++|--
T Consensus 122 ---------------~~~ivv~TPgrl~~~~~~~~~~~~~l~~lVlD 153 (206)
T d1veca_ 122 ---------------TVHVVIATPGRILDLIKKGVAKVDHVQMIVLD 153 (206)
T ss_dssp ---------------CCSEEEECHHHHHHHHHTTCSCCTTCCEEEEE
T ss_pred ---------------ccCeEEeCCccccccccchhccccccceEEEe
Confidence 3889999974211 02445678889988864
No 39
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=72.24 E-value=5.9 Score=29.44 Aligned_cols=92 Identities=13% Similarity=0.069 Sum_probs=53.9
Q ss_pred HHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhcc---CCceEEEecCCCCHHHHHHHHHHHhcccccccccccc
Q 028124 37 ETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNL---ADISFSSLHSDLAETERTLILEEFRHTAMKWNQKVTE 113 (213)
Q Consensus 37 ~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~---~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~~~~ 113 (213)
..+.-++..+.. .....+++|.|+++..+..+...+... ..+....++++-+..++... .+
T Consensus 63 a~~lp~i~~l~~-~~~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------ 126 (212)
T d1qdea_ 63 TFSIAALQRIDT-SVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEG---LR------------ 126 (212)
T ss_dssp HHHHHHHHHCCT-TCCSCCEEEECSSHHHHHHHHHHHHHHTTTSCCCEEEECC-------------CT------------
T ss_pred hhHhhhHhhhhc-cCCCcceEEEcccHHHhhhhhhhhcccccccccceeeEeeccchhHHHHH---hc------------
Confidence 333444444322 345679999999999999988888554 23566667766544443221 11
Q ss_pred cCCCCCcCCCCCCceeEEEEeCCCCC--cCcCCCCCCCCCEEEEec
Q 028124 114 QSGDESETGKDEHKSHMIVVTDACLP--LLSSGESAISARVLINYE 157 (213)
Q Consensus 114 ~~~~~~~~~~~~~~~~iLV~Td~~~~--~~~rGld~~~v~~VI~yd 157 (213)
..+++|+|+..+- ....++++.+++++|--+
T Consensus 127 -------------~~~IvI~TP~~l~~~~~~~~~~l~~l~~lVlDE 159 (212)
T d1qdea_ 127 -------------DAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDE 159 (212)
T ss_dssp -------------TCSEEEECHHHHHHHHHTTSSCCTTCCEEEEET
T ss_pred -------------CCcEEEECCCccccccccCceecCcceEEeehh
Confidence 2689999963100 025677889999988643
No 40
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=71.52 E-value=4.1 Score=30.98 Aligned_cols=106 Identities=11% Similarity=0.078 Sum_probs=65.8
Q ss_pred EEEEecCcchH-HHHHHHHHHHhhcC--------CCCCCcEEEEeCchHHHHHHHHHHhcc---CCceEEEecCCCCHHH
Q 028124 25 FYVAVDRLQFK-METLVELLHLVVAG--------RRPGLPMIVCCSSRDELDAVCSAVSNL---ADISFSSLHSDLAETE 92 (213)
Q Consensus 25 ~~~~~~~~~~K-~~~L~~ll~~~~~~--------~~~~~~~IIF~~~~~~~~~l~~~L~~~---~~~~~~~lhg~~~~~~ 92 (213)
.++..+...=| +..+.-+|..+... .....+++|.|++++-|..+.+.+... ..+++..+.|+....+
T Consensus 61 vvi~a~TGsGKTlayllp~l~~l~~~~~~~~~~~~~~~~~alil~pt~el~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~ 140 (238)
T d1wrba1 61 IMACAQTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHS 140 (238)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTTCC------CCBCCSEEEECSSHHHHHHHHHHHHHHHTTSSCCEEEECSSSCSHH
T ss_pred EEEECCCCCCcceeeHHHHHHHHHhcccccccccCCCCceEEEeccchhhhcchheeeeecccCCCcEEEEEeccchhhH
Confidence 44555444334 34444455544221 233568999999999999998777543 2278888888776555
Q ss_pred HHHHHHHHhcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCc--CcCCCCCCCCCEEEEec
Q 028124 93 RTLILEEFRHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPL--LSSGESAISARVLINYE 157 (213)
Q Consensus 93 R~~~l~~Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~--~~rGld~~~v~~VI~yd 157 (213)
+.. ....+ .+++|+|+..+-. -...+++.++.++|--+
T Consensus 141 ~~~---~~~~~------------------------~~ivV~TP~~l~~~~~~~~~~l~~v~~lViDE 180 (238)
T d1wrba1 141 QIR---EVQMG------------------------CHLLVATPGRLVDFIEKNKISLEFCKYIVLDE 180 (238)
T ss_dssp HHH---HHSSC------------------------CSEEEECHHHHHHHHHTTSBCCTTCCEEEEET
T ss_pred HHh---hcccC------------------------CceeecCHHHHHhHHccCceeccccceeeeeh
Confidence 432 22332 8899999851100 14567889999988643
No 41
>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=69.63 E-value=2.2 Score=27.80 Aligned_cols=39 Identities=15% Similarity=0.191 Sum_probs=32.9
Q ss_pred CCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCC
Q 028124 51 RPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLA 89 (213)
Q Consensus 51 ~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~ 89 (213)
....+++++|++-..+...+..|...|+-.+..+.|++.
T Consensus 56 ~~~~~vv~~~~~g~~s~~~~~~l~~~G~~nV~~l~GG~~ 94 (101)
T d1yt8a2 56 RRDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLS 94 (101)
T ss_dssp CTTSCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHHH
T ss_pred ccCceeeeccchhhhHHHHHHHHHHcCCCcEEEeCChHH
Confidence 356789999999999999999999998556888899863
No 42
>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=69.36 E-value=1.5 Score=31.45 Aligned_cols=38 Identities=13% Similarity=0.092 Sum_probs=32.9
Q ss_pred CCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCC
Q 028124 51 RPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDL 88 (213)
Q Consensus 51 ~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~ 88 (213)
.+.+++|+||++-..+...+..|...|+..+..+.|++
T Consensus 56 ~~~~~vv~~c~~g~rs~~~a~~l~~~G~~~v~~L~GG~ 93 (157)
T d1yt8a3 56 GTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGT 93 (157)
T ss_dssp CCCSEEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHH
T ss_pred ccCcceeeccCCcchHHHHHHHHhcccCceEEEecCCH
Confidence 35689999999999999999999988866788999985
No 43
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=69.33 E-value=17 Score=26.24 Aligned_cols=105 Identities=13% Similarity=0.077 Sum_probs=67.0
Q ss_pred EEEEecCcchH-HHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhcc---CCceEEEecCCCCHHHHHHHHHHH
Q 028124 25 FYVAVDRLQFK-METLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNL---ADISFSSLHSDLAETERTLILEEF 100 (213)
Q Consensus 25 ~~~~~~~~~~K-~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~---~~~~~~~lhg~~~~~~R~~~l~~F 100 (213)
..+..+...=| +..+.-++..+.. .....++++.+.+...+......+... .++++...+|+......... .
T Consensus 41 vi~~a~tGsGKTlay~lp~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---l 116 (206)
T d1s2ma1 41 ILARAKNGTGKTAAFVIPTLEKVKP-KLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILR---L 116 (206)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHCCT-TSCSCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHHH---T
T ss_pred EEEecCCcchhhhhhcccccccccc-ccccccceeeccchhhhhhhhhhhhhcccccCeeEEeecCccchhhHHHH---h
Confidence 34444443323 3333444444322 456678999999999988777766543 34889999999887665433 3
Q ss_pred hcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCc--CcCCCCCCCCCEEEEec
Q 028124 101 RHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPL--LSSGESAISARVLINYE 157 (213)
Q Consensus 101 r~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~--~~rGld~~~v~~VI~yd 157 (213)
.. ..++||+|+..+-. -...+++.++.++|--+
T Consensus 117 ~~------------------------~~~Ili~TP~~l~~~l~~~~~~l~~l~~lV~DE 151 (206)
T d1s2ma1 117 NE------------------------TVHILVGTPGRVLDLASRKVADLSDCSLFIMDE 151 (206)
T ss_dssp TS------------------------CCSEEEECHHHHHHHHHTTCSCCTTCCEEEEES
T ss_pred cc------------------------cceEEEECCcccccccccceeecccceEEEeec
Confidence 34 38899999852111 14567889999988643
No 44
>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}
Probab=68.66 E-value=4 Score=28.71 Aligned_cols=51 Identities=12% Similarity=0.118 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhc-cCCceEEEecCCC
Q 028124 36 METLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSN-LADISFSSLHSDL 88 (213)
Q Consensus 36 ~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~-~~~~~~~~lhg~~ 88 (213)
.+.+.+++... + -.+.+++|+||++-.++...+..|+. .|+-.+..+.|++
T Consensus 74 ~~~~~~~~~~~-g-i~~d~~vV~yC~~G~~As~~~~~l~~~~G~~~v~~ydGs~ 125 (141)
T d1uara2 74 AEELRALYEPL-G-ITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSW 125 (141)
T ss_dssp HHHHHHHHGGG-T-CCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHH
T ss_pred HHHHHHHHHHh-C-CCCCCeEEEEecCcchHHHHHHHHHHHcCCCCeeEeCCcH
Confidence 34455555442 2 35678999999998888888888875 5744688888875
No 45
>d2b2na1 c.37.1.19 (A:26-333) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=68.02 E-value=11 Score=30.03 Aligned_cols=61 Identities=11% Similarity=0.115 Sum_probs=41.2
Q ss_pred HHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCC-------C-----CHHHHHHHHHHHhccc
Q 028124 38 TLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSD-------L-----AETERTLILEEFRHTA 104 (213)
Q Consensus 38 ~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~-------~-----~~~~R~~~l~~Fr~g~ 104 (213)
++.++++. ..+++||-|++...|+.+++.|+....-.+..+-+. . ...+|.+++.++..+.
T Consensus 5 ~~a~~~~~------~~~p~lvv~~~~~~A~~l~~~L~~~~~~~v~~fP~~e~lpyd~~s~~~~i~~~R~~~L~~l~~~~ 77 (308)
T d2b2na1 5 LVAEIAER------HAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQ 77 (308)
T ss_dssp HHHHHHHH------CSSCEEEEESSHHHHHHHHHHHHTTCSSCEEECCCCCSCTTCSSCCCHHHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHh------hCCCEEEEcCCHHHHHHHHHHHHhcCCCceEEcCCcccCccccCCCChHHHHHHHHHHHHHhhcC
Confidence 44555554 457899999999999999999987532344433221 1 1247888888888763
No 46
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.54 E-value=3 Score=31.40 Aligned_cols=105 Identities=11% Similarity=-0.002 Sum_probs=57.8
Q ss_pred EEEEecCcchH-HHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhcc---CCceEEEecCCCCHHHHHHHHHHH
Q 028124 25 FYVAVDRLQFK-METLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNL---ADISFSSLHSDLAETERTLILEEF 100 (213)
Q Consensus 25 ~~~~~~~~~~K-~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~---~~~~~~~lhg~~~~~~R~~~l~~F 100 (213)
..+..+...=| +..+.-++..+.. .....+++|+|+|+.-|..+++.+... .......++++....+.
T Consensus 52 vl~~a~TGsGKTlayllp~l~~i~~-~~~~~~alil~Pt~eL~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 123 (218)
T d2g9na1 52 VIAQAQSGTGKTATFAISILQQIEL-DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAE------- 123 (218)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHCCT-TCCSCCEEEECSSHHHHHHHHHHHHHHHTTTTCCEEEECC--CCCST-------
T ss_pred EEEEcccchhhhhhhhhhhhheecc-cccCccEEEEcccchhhhhHHHHHhhhccccceeEEeeecccchhHH-------
Confidence 33444443323 3333444444322 456778999999999999888877654 22455555554322110
Q ss_pred hcccccccccccccCCCCCcCCCCCCceeEEEEeCCCCCc--CcCCCCCCCCCEEEEe
Q 028124 101 RHTAMKWNQKVTEQSGDESETGKDEHKSHMIVVTDACLPL--LSSGESAISARVLINY 156 (213)
Q Consensus 101 r~g~~~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~~~~--~~rGld~~~v~~VI~y 156 (213)
......+..+++|+|+..+-. ......+.++.++|--
T Consensus 124 -------------------~~~~~~~~~~IvV~TP~rl~~~l~~~~~~~~~l~~lVlD 162 (218)
T d2g9na1 124 -------------------VQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLD 162 (218)
T ss_dssp -------------------TTSSSSCCCSEEEECHHHHHHHHHTTSSCSTTCCEEEEE
T ss_pred -------------------HHHHhcCCCEEEEeCChhHHHHHhcCCcccccceEEEee
Confidence 011111247899999731000 2455677889988864
No 47
>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}
Probab=65.99 E-value=3.2 Score=29.28 Aligned_cols=52 Identities=12% Similarity=0.051 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCC
Q 028124 36 METLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLA 89 (213)
Q Consensus 36 ~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~ 89 (213)
.+.|.+++... + -.+..++|+||++-.++..++..|...|+-.+..+.|++.
T Consensus 76 ~~~l~~~~~~~-g-i~~~~~iI~yC~sG~~A~~~~~~l~~lG~~~v~~YdGsw~ 127 (144)
T d1rhsa2 76 PEELRAMFEAK-K-VDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWF 127 (144)
T ss_dssp HHHHHHHHHHT-T-CCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHH
T ss_pred HHHHHHHHHHc-C-CCCCCCEEEEecccchHHHHHHHHHHcCCCCCEEeCCCHH
Confidence 34556666552 1 2567899999998777887888887778546778888753
No 48
>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=61.99 E-value=4.3 Score=28.58 Aligned_cols=51 Identities=14% Similarity=0.006 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhhcCCCCCCcEEEEeCc-hHHHHHHHHHHhccCCceEEEecCCC
Q 028124 36 METLVELLHLVVAGRRPGLPMIVCCSS-RDELDAVCSAVSNLADISFSSLHSDL 88 (213)
Q Consensus 36 ~~~L~~ll~~~~~~~~~~~~~IIF~~~-~~~~~~l~~~L~~~~~~~~~~lhg~~ 88 (213)
.+.+.+++..+ + -.+..++||||.. ...+.+++..|+..|+-.+..|.|++
T Consensus 70 ~~~~~~~l~~~-G-i~~~~~vVvY~~~~~~~A~r~~~~L~~~G~~~V~vLdGG~ 121 (147)
T d1urha1 70 PETFAVAMREL-G-VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGL 121 (147)
T ss_dssp HHHHHHHHHHT-T-CCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHH
T ss_pred HHHHHHHHHHh-C-cCCCCeEEEEeCCCcccchhHHHHHHhhcccceEEeCChH
Confidence 35566666653 2 3567899999965 34577899999988866799999995
No 49
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.74 E-value=27 Score=26.32 Aligned_cols=63 Identities=8% Similarity=0.030 Sum_probs=45.2
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHH-HHHHHHhcccccccccccccCCCCCcCCCCCCceeE
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERT-LILEEFRHTAMKWNQKVTEQSGDESETGKDEHKSHM 130 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~-~~l~~Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~~i 130 (213)
.+..+++.+.+.+.++.+.+.|+..+ ..+..+..|++..+-. +..+++...- +++++
T Consensus 27 ~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dvs~~~sv~~~~~~~~~~~---------------------g~iDi 84 (275)
T d1wmaa1 27 FSGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRALRDFLRKEY---------------------GGLDV 84 (275)
T ss_dssp SSSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHH---------------------SSEEE
T ss_pred CCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEEecCCHHHHHHHHHHHHHhc---------------------CCcEE
Confidence 35789999999999999999998876 5777888888665443 3334443311 25999
Q ss_pred EEEeCC
Q 028124 131 IVVTDA 136 (213)
Q Consensus 131 LV~Td~ 136 (213)
||..-.
T Consensus 85 LVnNAG 90 (275)
T d1wmaa1 85 LVNNAG 90 (275)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 998765
No 50
>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}
Probab=54.74 E-value=8.9 Score=26.65 Aligned_cols=50 Identities=4% Similarity=-0.039 Sum_probs=34.7
Q ss_pred HHHHHHHHHhhcCCCCCCcEEEEeCchH-HHHHHHHHHhccCCceEEEecCCC
Q 028124 37 ETLVELLHLVVAGRRPGLPMIVCCSSRD-ELDAVCSAVSNLADISFSSLHSDL 88 (213)
Q Consensus 37 ~~L~~ll~~~~~~~~~~~~~IIF~~~~~-~~~~l~~~L~~~~~~~~~~lhg~~ 88 (213)
+.|.+++..+- -.+..++||||.+.. .+...+..|+..|+-.+..|.|++
T Consensus 64 ~~l~~~~~~~G--i~~~~~iVvy~~~~~~~a~~~~~~l~~~G~~~V~vldGG~ 114 (143)
T d1uara1 64 EEFAKLMERLG--ISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGR 114 (143)
T ss_dssp HHHHHHHHHTT--CCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHH
T ss_pred HHHHHHhhhhc--cCCCceEEEecCCCcccchhHHHHHHHhCCceEEEEcCcH
Confidence 44566666531 245678999987654 466677777777766889999985
No 51
>g1pyo.1 c.17.1.1 (A:,B:) Caspase-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.65 E-value=13 Score=28.17 Aligned_cols=47 Identities=13% Similarity=0.104 Sum_probs=38.3
Q ss_pred CcEEEEeCc--------------hHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhc
Q 028124 54 LPMIVCCSS--------------RDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRH 102 (213)
Q Consensus 54 ~~~IIF~~~--------------~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~ 102 (213)
+-+||++|. ...++.|++.|+..| +.+ .++-+++.++-.+.+++|..
T Consensus 27 G~aLII~N~~f~~~~~l~~r~g~~~Da~~l~~~l~~lG-F~V-~~~~nlt~~em~~~l~~f~~ 87 (257)
T g1pyo.1 27 GLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLG-YDV-HVLCDQTAQEMQEKLQNFAQ 87 (257)
T ss_dssp EEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTT-EEE-EEEESCCHHHHHHHHHHHHT
T ss_pred CEEEEEeCccCCCccCCCCCCCcHHHHHHHHHHHHHCC-CEE-EEEecCCHHHHHHHHHHHHh
Confidence 468999873 258999999999998 665 45568999999999999965
No 52
>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}
Probab=53.69 E-value=14 Score=26.37 Aligned_cols=49 Identities=6% Similarity=0.011 Sum_probs=35.5
Q ss_pred HHHHHHHHHhhcCCCCCCcEEEEeCch--HHHHHHHHHHhccCCceEEEecCCC
Q 028124 37 ETLVELLHLVVAGRRPGLPMIVCCSSR--DELDAVCSAVSNLADISFSSLHSDL 88 (213)
Q Consensus 37 ~~L~~ll~~~~~~~~~~~~~IIF~~~~--~~~~~l~~~L~~~~~~~~~~lhg~~ 88 (213)
+.|.+.+..+ + -.+..++|||++.. -.+.+++..|+..| ..+..|.|++
T Consensus 75 ~~~~~~l~~l-G-I~~~~~VVvYd~~~g~~~A~R~~w~L~~~G-~~v~iLdGG~ 125 (156)
T d1okga1 75 AEFIDWCMAN-G-MAGELPVLCYDDECGAMGGCRLWWMLNSLG-ADAYVINGGF 125 (156)
T ss_dssp HHHHHHHHHT-T-CSSSSCEEEECSSTTTTTHHHHHHHHHHHT-CCEEEETTTT
T ss_pred HHHHHHHHhc-c-ccCCceEEEEeCCCCchHHHHHHHHHHHcC-CeeEEeCCCH
Confidence 4455555552 2 24678999998654 35778888999888 5899999996
No 53
>g1qtn.1 c.17.1.1 (A:,B:) Caspase-8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.17 E-value=15 Score=27.40 Aligned_cols=38 Identities=16% Similarity=0.189 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhcc
Q 028124 64 DELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHT 103 (213)
Q Consensus 64 ~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g 103 (213)
..++.|++.|+..| +.+. ++-+++.++-.+.+++|...
T Consensus 43 ~Da~~l~~~l~~lG-F~V~-~~~nlt~~~~~~~l~~~~~~ 80 (242)
T g1qtn.1 43 LDAGALTTTFEELH-FEIK-PHDDCTVEQIYEILKIYQLM 80 (242)
T ss_dssp HHHHHHHHHHHHTT-CEEE-EEESCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHCC-CEEE-ECcCCCHHHHHHHHHHhhhh
Confidence 48889999999998 5654 55589999999999999764
No 54
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=52.46 E-value=31 Score=24.07 Aligned_cols=123 Identities=15% Similarity=0.130 Sum_probs=71.2
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhcc---CCceEEEecCCCCHHHHHHHHHHHhcccccccccccccCCCCCcCCCCCCce
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNL---ADISFSSLHSDLAETERTLILEEFRHTAMKWNQKVTEQSGDESETGKDEHKS 128 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~---~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (213)
.++++++.++++.-++..++.+++. .+..+..+|++....+|...+.. .
T Consensus 51 ~~~~il~i~P~~~L~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----------------------------~ 102 (200)
T d1wp9a1 51 YGGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALTGEKSPEERSKAWAR----------------------------A 102 (200)
T ss_dssp SCSCEEEECSSHHHHHHHHHHHHHHBCSCGGGEEEECSCSCHHHHHHHHHH----------------------------C
T ss_pred cCCcEEEEcCchHHHHHHHHHHHHhhcccccceeeeecccchhHHHHhhhc----------------------------c
Confidence 4678999999999888888777654 23678889999988887765432 4
Q ss_pred eEEEEeCCCCCc--CcCCCCCCCCCEEEEecCCC----ChHHHHHhhccccCCCCeEEEEE-eC-chhHHHHHHHHHhcc
Q 028124 129 HMIVVTDACLPL--LSSGESAISARVLINYELPT----KKETYIRRMTTCLAADGSVINIV-VG-GEVVTLRSMEESLGL 200 (213)
Q Consensus 129 ~iLV~Td~~~~~--~~rGld~~~v~~VI~yd~P~----~~~~yi~R~GR~~~~~g~~i~~~-~~-~e~~~~~~le~~l~~ 200 (213)
.++++|...+.. ....+.+.++++||.-+... ....++.+.-.........+.+- ++ .+...+.++...++.
T Consensus 103 ~i~i~t~~~~~~~~~~~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~~~~~~~~~~~~l~~SATp~~~~~~~~~~~~~l~~ 182 (200)
T d1wp9a1 103 KVIVATPQTIENDLLAGRISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAKNPLVIGLTASPGSTPEKIMEVINNLGI 182 (200)
T ss_dssp SEEEECHHHHHHHHHTTSCCTTSCSEEEEETGGGCSTTCHHHHHHHHHHHHCSSCCEEEEESCSCSSHHHHHHHHHHTTC
T ss_pred cccccccchhHHHHhhhhhhccccceEEEEehhhhhcchhHHHHHHHHHhcCCCCcEEEEEecCCCcHHHHHHHHhcCCc
Confidence 567777542111 23344556788887654332 11222221111122333344333 23 345566677776665
Q ss_pred cc
Q 028124 201 IV 202 (213)
Q Consensus 201 ~~ 202 (213)
..
T Consensus 183 ~~ 184 (200)
T d1wp9a1 183 EH 184 (200)
T ss_dssp CE
T ss_pred eE
Confidence 43
No 55
>d1em8a_ c.128.1.1 (A:) DNA polymerase III chi subunit {Escherichia coli [TaxId: 562]}
Probab=50.97 E-value=12 Score=26.25 Aligned_cols=39 Identities=10% Similarity=0.124 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhcc
Q 028124 35 KMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNL 76 (213)
Q Consensus 35 K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~ 76 (213)
....+++|++.... .+.+++|+|+....++.|-+.|=..
T Consensus 21 ~~~~~crL~~K~~~---~g~ri~I~~~d~~~~~~lD~~LWt~ 59 (147)
T d1em8a_ 21 VEQLVCEIAAERWR---SGKRVLIACEDEKQAYRLDEALWAR 59 (147)
T ss_dssp HHHHHHHHHHHHHH---TTCCEEEECSSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHhCC
Confidence 34567778876544 5789999999999999999999443
No 56
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}
Probab=50.10 E-value=45 Score=24.74 Aligned_cols=48 Identities=13% Similarity=0.302 Sum_probs=35.5
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHH-HHHHHHH
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETER-TLILEEF 100 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R-~~~l~~F 100 (213)
.+-++++...+.+.++.+++.|+..+ .++..+..|++..+- ..++++.
T Consensus 25 ~Ga~V~i~~r~~~~l~~~~~~l~~~g-~~~~~~~~Dvs~~~~v~~~~~~~ 73 (257)
T d2rhca1 25 EGLRVFVCARGEEGLRTTLKELREAG-VEADGRTCDVRSVPEIEALVAAV 73 (257)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEeecCCHHHHHHHHHHH
Confidence 46788888888888999999998876 588888899865543 3334433
No 57
>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}
Probab=48.89 E-value=9.9 Score=26.60 Aligned_cols=50 Identities=8% Similarity=0.009 Sum_probs=35.4
Q ss_pred HHHHHHHHHhhcCCCCCCcEEEEeCc---hHHHHHHHHHHhccCCceEEEecCCC
Q 028124 37 ETLVELLHLVVAGRRPGLPMIVCCSS---RDELDAVCSAVSNLADISFSSLHSDL 88 (213)
Q Consensus 37 ~~L~~ll~~~~~~~~~~~~~IIF~~~---~~~~~~l~~~L~~~~~~~~~~lhg~~ 88 (213)
+.+.+++..+ + -.+..+++||++. -..+.+++..|+..|+-.+..|.|++
T Consensus 78 ~~~~~~l~~~-G-i~~~~~vVvy~~~~~~~~~a~r~~w~L~~~G~~~V~vLdGG~ 130 (149)
T d1rhsa1 78 AGFADYVGSL-G-ISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGF 130 (149)
T ss_dssp HHHHHHHHHT-T-CCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHH
T ss_pred HHHHHHHhhh-h-ccCCceeEEeeccCCcchhhhHHHHHHHHcCCCceEEeCCcH
Confidence 4456666552 2 2466788888864 23567889999999865799999985
No 58
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}
Probab=45.17 E-value=54 Score=24.25 Aligned_cols=42 Identities=12% Similarity=0.226 Sum_probs=33.2
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHH
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERT 94 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~ 94 (213)
.+-++++...+.+.++.+.+.+...+ .++..+..|++..+..
T Consensus 24 ~Ga~V~~~~r~~~~l~~~~~~i~~~g-~~~~~~~~Dv~~~~~v 65 (255)
T d1gega_ 24 DGFAVAIADYNDATAKAVASEINQAG-GHAVAVKVDVSDRDQV 65 (255)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEeeCCCHHHH
Confidence 36678888888888999999998876 5888889998765543
No 59
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=45.00 E-value=55 Score=24.24 Aligned_cols=41 Identities=15% Similarity=0.234 Sum_probs=33.6
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHH
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETER 93 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R 93 (213)
.+.++++...+.+.++.+++.+...+ .++..+..|++..+.
T Consensus 33 ~Ga~V~~~~r~~~~l~~~~~~l~~~g-~~~~~~~~Dvt~~~~ 73 (251)
T d2c07a1 33 SVSHVICISRTQKSCDSVVDEIKSFG-YESSGYAGDVSKKEE 73 (251)
T ss_dssp TSSEEEEEESSHHHHHHHHHHHHTTT-CCEEEEECCTTCHHH
T ss_pred cCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHH
Confidence 56788888888899999999998876 588889999876544
No 60
>d1m72a_ c.17.1.1 (A:) Caspase-1 {Fall armyworm (Spodoptera frugiperda) [TaxId: 7108]}
Probab=44.32 E-value=20 Score=27.10 Aligned_cols=47 Identities=11% Similarity=0.195 Sum_probs=36.0
Q ss_pred cEEEEeCc-------------hHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhcc
Q 028124 55 PMIVCCSS-------------RDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHT 103 (213)
Q Consensus 55 ~~IIF~~~-------------~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g 103 (213)
-+||++|. ...++.|++.|++.| +.+ .++-+++.++-.+.+++|.+.
T Consensus 23 ~aLIInN~~f~~~~~~~r~g~~~Da~~l~~~l~~lG-F~V-~~~~nlt~~~m~~~l~~~~~~ 82 (256)
T d1m72a_ 23 MAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLG-FKV-TVFPNLKSEEINKFIQQTAEM 82 (256)
T ss_dssp EEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTT-CEE-EEEESCCHHHHHHHHHHHHTS
T ss_pred EEEEEeCCccCCCCCCCCCChHHHHHHHHHHHHHCC-CEE-EEEeCCCHHHHHHHHHHHhhh
Confidence 47777663 347889999999998 565 566678888888889888764
No 61
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=42.41 E-value=53 Score=24.46 Aligned_cols=41 Identities=15% Similarity=0.230 Sum_probs=33.2
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHH
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETER 93 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R 93 (213)
.+.++++...+.+.++.+.+.++..+ .++..+..|++..+-
T Consensus 34 ~Ga~V~~~~r~~~~~~~~~~~l~~~g-~~~~~~~~Dvs~~~~ 74 (255)
T d1fmca_ 34 AGASVVVSDINADAANHVVDEIQQLG-GQAFACRCDITSEQE 74 (255)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHcC-CcEEEEEccCCCHHH
Confidence 46788888888888999999998876 588889999876544
No 62
>d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]}
Probab=40.01 E-value=19 Score=25.32 Aligned_cols=78 Identities=14% Similarity=0.269 Sum_probs=47.7
Q ss_pred CceEEEEEecCc-chHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhc--cCCceEEEecCCCCHHHHHHHH
Q 028124 21 QPRHFYVAVDRL-QFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSN--LADISFSSLHSDLAETERTLIL 97 (213)
Q Consensus 21 ~i~~~~~~~~~~-~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~--~~~~~~~~lhg~~~~~~R~~~l 97 (213)
-+..-|+.+.+. =..++-+..+|+... ....|.+|++...+. +.|+..+.+ +|.+++..+..=---+.|...|
T Consensus 23 ~l~~p~ILi~d~kI~~~~~ilp~Le~~~---~~~rPLlIIA~di~~-eaL~~Lv~N~~~g~l~v~aVkaP~fG~~r~~~L 98 (145)
T d1srva_ 23 VLEDAFILIVEKKVSNVRELLPILEQVA---QTGKPLLIIAEDVEG-EALATLVVNKLRGTLSVAAVKAPGFGDRRKEML 98 (145)
T ss_dssp EEEEEEEEEESSEECCHHHHHHHHHHHH---TTTCCEEEEESEECH-HHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHH
T ss_pred EecCceeeecccccccHHHHHHHHHHHH---HhCCcEEEEeCccCH-HHHHHHHHHHhcCceEEEEEeCCCccHHHHHHH
Confidence 355566665543 234555666665533 466899999986654 444443322 2447887777644567888888
Q ss_pred HHHhc
Q 028124 98 EEFRH 102 (213)
Q Consensus 98 ~~Fr~ 102 (213)
++..-
T Consensus 99 ~DlAi 103 (145)
T d1srva_ 99 KDIAA 103 (145)
T ss_dssp HHHHH
T ss_pred hhhhh
Confidence 88655
No 63
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}
Probab=38.55 E-value=71 Score=23.70 Aligned_cols=42 Identities=17% Similarity=0.248 Sum_probs=33.6
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHH
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERT 94 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~ 94 (213)
.+.++++...+...++.+.+.++..+ ..+..+..|++..+..
T Consensus 29 ~G~~V~i~~r~~~~l~~~~~~~~~~~-~~~~~~~~D~s~~~~~ 70 (258)
T d1ae1a_ 29 LGARVYTCSRNEKELDECLEIWREKG-LNVEGSVCDLLSRTER 70 (258)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHhcC-CCceEEEeecCCHHHH
Confidence 46789999888889999999998886 6788888888665543
No 64
>d1s8na_ c.23.1.1 (A:) Probable two-component system transcriptional regulator Rv1626 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=37.25 E-value=62 Score=22.62 Aligned_cols=111 Identities=12% Similarity=0.119 Sum_probs=70.8
Q ss_pred EEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhcccc
Q 028124 26 YVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHTAM 105 (213)
Q Consensus 26 ~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~ 105 (213)
.+.++++..-...|..+|+. .+-.++-.+++-..|-.+.... . ..++.+.=.||.....+++++.+...
T Consensus 6 ILiVDD~~~~r~~l~~~L~~------~g~~vv~~a~~g~eal~~~~~~---~-pDlvllDi~mP~~dG~e~~~~ir~~~- 74 (190)
T d1s8na_ 6 VLIAEDEALIRMDLAEMLRE------EGYEIVGEAGDGQEAVELAELH---K-PDLVIMDVKMPRRDGIDAASEIASKR- 74 (190)
T ss_dssp EEEECSSHHHHHHHHHHHHH------TTCEEEEEESSHHHHHHHHHHH---C-CSEEEEESSCSSSCHHHHHHHHHHTT-
T ss_pred EEEEeCCHHHHHHHHHHHHH------CCCEEEEEECCHHHHHHHHhcC---C-CCEEEEeccccCcchHHHHHHHHhcC-
Confidence 45677776566777777765 2345555777777766655543 2 56777777788888899999988752
Q ss_pred cccccccccCCCCCcCCCCCCceeEEEEeCCC-CCcCcCCCCCCCCCEEEEecCCCChHHHHHhhcc
Q 028124 106 KWNQKVTEQSGDESETGKDEHKSHMIVVTDAC-LPLLSSGESAISARVLINYELPTKKETYIRRMTT 171 (213)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~~-~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR 171 (213)
...|++.|.-. .....+++.....+++.= |.+++..++++-.
T Consensus 75 ---------------------~~pIi~lTa~~~~~~~~~al~~Ga~~yl~K---P~~~~~L~~~i~~ 117 (190)
T d1s8na_ 75 ---------------------IAPIVVLTAFSQRDLVERARDAGAMAYLVK---PFSISDLIPAIEL 117 (190)
T ss_dssp ---------------------CSCEEEEEEGGGHHHHHTTGGGSCEEEEEE---SCCHHHHHHHHHH
T ss_pred ---------------------CCCEEEEeCCCCHHHHHHHHHcCCCEeccC---CCCHHHHHHHHHH
Confidence 47788887630 000234445444455554 7777777777643
No 65
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]}
Probab=37.22 E-value=53 Score=21.88 Aligned_cols=38 Identities=8% Similarity=0.114 Sum_probs=21.9
Q ss_pred chHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhc
Q 028124 62 SRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRH 102 (213)
Q Consensus 62 ~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~ 102 (213)
|.+-|+.+++.+...| +.+..++- +......+...+..
T Consensus 16 T~~vA~~Ia~~l~~~g-~~v~~~~~--~~~~~~~~~~~~~~ 53 (149)
T d1ycga1 16 TEKMAHALMDGLVAGG-CEVKLFKL--SVSDRNDVIKEILD 53 (149)
T ss_dssp HHHHHHHHHHHHHHTT-CEEEEEEG--GGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC-CeeEEEEc--cccchHHHhhhhhh
Confidence 6667777777777776 66666652 22233344455544
No 66
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=36.42 E-value=51 Score=21.46 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=66.0
Q ss_pred EEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhcccc
Q 028124 26 YVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHTAM 105 (213)
Q Consensus 26 ~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g~~ 105 (213)
.+.++++..-.+.|.+.|+. .+-.+..+. +-..|- +.+.... ..++.+.-.|+.....+++++.|+..
T Consensus 4 ILiVDD~~~~~~~l~~~L~~------~g~~v~~a~-~~~eal---~~~~~~~-~dlvl~D~~mP~~~G~el~~~ir~~~- 71 (121)
T d1ys7a2 4 VLVVDDDSDVLASLERGLRL------SGFEVATAV-DGAEAL---RSATENR-PDAIVLDINMPVLDGVSVVTALRAMD- 71 (121)
T ss_dssp EEEECSCHHHHHHHHHHHHH------TTCEEEEES-SHHHHH---HHHHHSC-CSEEEEESSCSSSCHHHHHHHHHHTT-
T ss_pred EEEEECCHHHHHHHHHHHHH------CCCEEEEEC-CHHHHH---HHHHhCC-CCEEEEEeeccCcccHHHHHHHHhcC-
Confidence 45677766566677777766 345655554 333332 3333343 57888888888888888999888642
Q ss_pred cccccccccCCCCCcCCCCCCceeEEEEeCC-CCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhcc
Q 028124 106 KWNQKVTEQSGDESETGKDEHKSHMIVVTDA-CLPLLSSGESAISARVLINYELPTKKETYIRRMTT 171 (213)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~iLV~Td~-~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR 171 (213)
....+++.|.. -.....++++....+++. =|-+.+.++.++-+
T Consensus 72 --------------------~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~---KP~~~~~L~~~i~~ 115 (121)
T d1ys7a2 72 --------------------NDVPVCVLSARSSVDDRVAGLEAGADDYLV---KPFVLAELVARVKA 115 (121)
T ss_dssp --------------------CCCCEEEEECCCTTTCCCTTTTTTCSEEEE---SSCCHHHHHHHHHH
T ss_pred --------------------CCCEEEEEEeeCCHHHHHHHHHCCCCEEEE---CCCCHHHHHHHHHH
Confidence 23666666643 111134555554444433 36777777777654
No 67
>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}
Probab=36.10 E-value=76 Score=23.30 Aligned_cols=49 Identities=10% Similarity=0.177 Sum_probs=34.4
Q ss_pred CCCcEEE-EeCchHHHHHHHHHHhccCCceEEEecCCCCHHHH-HHHHHHHh
Q 028124 52 PGLPMIV-CCSSRDELDAVCSAVSNLADISFSSLHSDLAETER-TLILEEFR 101 (213)
Q Consensus 52 ~~~~~II-F~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R-~~~l~~Fr 101 (213)
.+-++++ +.++.+.++.+.+.+...+ .++..+..|++..+. .+++++..
T Consensus 24 ~Ga~V~i~~~~~~~~~~~~~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~ 74 (244)
T d1edoa_ 24 AGCKVLVNYARSAKAAEEVSKQIEAYG-GQAITFGGDVSKEADVEAMMKTAI 74 (244)
T ss_dssp TTCEEEEEESSCHHHHHHHHHHHHHHT-CEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHcC-CcEEEEeCCCCCHHHHHHHHHHHH
Confidence 3567766 4567788999999998877 588888899876554 33444443
No 68
>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}
Probab=34.73 E-value=8.3 Score=26.71 Aligned_cols=40 Identities=13% Similarity=-0.039 Sum_probs=31.1
Q ss_pred CCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCH
Q 028124 51 RPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAE 90 (213)
Q Consensus 51 ~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~ 90 (213)
.+.+++|+||++-.++...+..|...|+-.+..+.|++..
T Consensus 82 ~~~~~vV~yC~sG~~Aa~~~~~L~~~G~~~v~vydGsw~e 121 (139)
T d1okga2 82 ADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSE 121 (139)
T ss_dssp CCCTTSEEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHhCCCCccCCCCCHHH
Confidence 3457899999998888888888888885457778887643
No 69
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.53 E-value=81 Score=23.21 Aligned_cols=48 Identities=8% Similarity=0.131 Sum_probs=37.4
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHH-HHHHH
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTL-ILEEF 100 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~-~l~~F 100 (213)
.+-++++...+.+.++.+++.+...+ -++..+..|++..+..+ .++..
T Consensus 30 ~G~~V~l~~r~~~~l~~~~~~~~~~~-~~~~~~~~Dvs~~~~v~~~~~~i 78 (244)
T d1yb1a_ 30 LKSKLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCSNREDIYSSAKKV 78 (244)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHH
Confidence 46789999999999999999998876 58888889987766533 44444
No 70
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=32.38 E-value=89 Score=22.99 Aligned_cols=41 Identities=12% Similarity=0.292 Sum_probs=29.6
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhcc-CCceEEEecCCCCHHHH
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNL-ADISFSSLHSDLAETER 93 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~-~~~~~~~lhg~~~~~~R 93 (213)
.+-++++...+.+..+.+.+.|... + .++..+..|++..+.
T Consensus 28 ~Ga~V~i~~r~~~~~~~~~~~l~~~~g-~~~~~~~~Dv~~~~~ 69 (251)
T d1vl8a_ 28 AGCSVVVASRNLEEASEAAQKLTEKYG-VETMAFRCDVSNYEE 69 (251)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHhC-CcEEEEEccCCCHHH
Confidence 3677888777778888887777543 4 578888899865443
No 71
>g1nme.1 c.17.1.1 (A:,B:) Apopain (caspase-3, cpp32) {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.68 E-value=32 Score=25.47 Aligned_cols=38 Identities=13% Similarity=0.184 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhcc
Q 028124 64 DELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHT 103 (213)
Q Consensus 64 ~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g 103 (213)
..++.|++.|++.| +++ .+.-+++.++-.+.+++|...
T Consensus 41 ~Da~~l~~~l~~lG-F~V-~~~~nlt~~~~~~~l~~~~~~ 78 (238)
T g1nme.1 41 VDAANLRETFRNLK-YEV-RNKNDLTREEIVELMRDVSKE 78 (238)
T ss_dssp HHHHHHHHHHHHTT-CEE-EEEESCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHCC-CEE-EEEeCCCHHHHHHHHHHhhhh
Confidence 57889999999888 565 455567777778888888764
No 72
>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}
Probab=28.01 E-value=79 Score=25.89 Aligned_cols=58 Identities=17% Similarity=0.202 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEe--cCCCCHHHHHH
Q 028124 35 KMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSL--HSDLAETERTL 95 (213)
Q Consensus 35 K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~l--hg~~~~~~R~~ 95 (213)
=++++..++.... .....+|+.+.|-++....+..++..++++++.+ +|+.+.-++.+
T Consensus 110 a~~~~~~~~~~~~---~~~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~~vl~P~g~vS~~Q~~Q 169 (428)
T d1vb3a1 110 GGRFMAQMLTHIA---GDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKL 169 (428)
T ss_dssp HHHHHHHHHHHHT---TTCCEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHHHH
T ss_pred hhhHHHHHHhhhc---ccccceeeecCCCCcchhHHHHHhCccccceEEEecCCCCcHHHHHH
Confidence 3466677776632 3445677777788898999999988877888877 68888776655
No 73
>d1ewka_ c.93.1.1 (A:) Metabotropic glutamate receptor subtype 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=27.43 E-value=1.4e+02 Score=23.65 Aligned_cols=79 Identities=11% Similarity=0.140 Sum_probs=49.9
Q ss_pred CCCceEEEEEecCcchHHHHHHHHHHHhhcCCCCCCcE-EEEeCch---HHHHHHHHHHhccCCceEE---EecCCCCHH
Q 028124 19 FSQPRHFYVAVDRLQFKMETLVELLHLVVAGRRPGLPM-IVCCSSR---DELDAVCSAVSNLADISFS---SLHSDLAET 91 (213)
Q Consensus 19 ~~~i~~~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~-IIF~~~~---~~~~~l~~~L~~~~~~~~~---~lhg~~~~~ 91 (213)
...-..++-.++.+..-..++.++++. ....++ +|+.+.. ..++.+.+.+...+ +.+. .+..+.+..
T Consensus 160 ~~~yp~f~Rt~psd~~~~~ai~~ll~~-----f~W~~V~vi~~~d~~g~~~~~~l~~~~~~~~-i~v~~~~~i~~~~~~~ 233 (477)
T d1ewka_ 160 KTLYKYFLRVVPSDTLQARAMLDIVKR-----YNWTYVSAVHTEGNYGESGMDAFKELAAQEG-LCIAHSDKIYSNAGEK 233 (477)
T ss_dssp TTTCTTEEESSCCHHHHHHHHHHHHHH-----TTCCEEEEEEESSHHHHHHHHHHHHHHHHHT-CEEEEEEEECTTCCHH
T ss_pred cccCCceEEecccchhhHHHHHHHHHH-----cCCcEEEEEEecchhHHHHHHHHHHHHHHcC-cEEEEEeeccCCCchh
Confidence 333455777788887788899999988 234444 4444432 34556666666665 5553 344556667
Q ss_pred HHHHHHHHHhcc
Q 028124 92 ERTLILEEFRHT 103 (213)
Q Consensus 92 ~R~~~l~~Fr~g 103 (213)
+-...++.++..
T Consensus 234 ~~~~~l~~l~~~ 245 (477)
T d1ewka_ 234 SFDRLLRKLRER 245 (477)
T ss_dssp HHHHHHHHHHTT
T ss_pred hHHHHHHHHhhh
Confidence 777788888763
No 74
>d1t0ia_ c.23.5.4 (A:) Hypothetical protein Ylr011wp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.66 E-value=96 Score=21.57 Aligned_cols=56 Identities=18% Similarity=0.212 Sum_probs=34.9
Q ss_pred eeEEEEeCCCCCcCcCCCCCCCCCEEEEecCCCChHHHHHhhccc-cCCCCeEEEEEeCchhH---HHHHHHHHhcc
Q 028124 128 SHMIVVTDACLPLLSSGESAISARVLINYELPTKKETYIRRMTTC-LAADGSVINIVVGGEVV---TLRSMEESLGL 200 (213)
Q Consensus 128 ~~iLV~Td~~~~~~~rGld~~~v~~VI~yd~P~~~~~yi~R~GR~-~~~~g~~i~~~~~~e~~---~~~~le~~l~~ 200 (213)
--++++|+. .|+.+|.-...++.|.+|. .|++..+++.-..+... .++.+-..+|.
T Consensus 86 D~iIi~tP~-----------------Y~~~~~~~lK~~iD~~~~~~~gKpv~ivs~g~~gg~~a~~~L~~~l~~~g~ 145 (185)
T d1t0ia_ 86 DIIVFVTPQ-----------------YNWGYPAALKNAIDRLYHEWHGKPALVVSYGGHGGSKCNDQLQEVLHGLKM 145 (185)
T ss_dssp SEEEEEEEC-----------------BTTBCCHHHHHHHHTCSTTTTTCEEEEEEEETTTTHHHHHHHHHHHHHTTC
T ss_pred CCeEEEEee-----------------ecCCCcHHHHHHHHHhhHHHCCCEEEEEEEcCcchHHHHHHHHHHHHHCCC
Confidence 348888887 6788999999999999886 45554443332222222 34444444443
No 75
>d1pjra2 c.37.1.19 (A:319-651) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=26.46 E-value=1e+02 Score=22.73 Aligned_cols=51 Identities=8% Similarity=0.046 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhhcCC-CCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecC
Q 028124 35 KMETLVELLHLVVAGR-RPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHS 86 (213)
Q Consensus 35 K~~~L~~ll~~~~~~~-~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg 86 (213)
=.+.+.+-+..+.... .+..-+.|-|.+.+.+..++..|.+.| +.+....+
T Consensus 14 Ea~~Ia~~I~~li~~g~~~~~DIAILvRt~~~~~~i~~~L~~~g-IP~~~~~~ 65 (333)
T d1pjra2 14 EAQFVAGRIREAVERGERRYRDFAVLYRTNAQSRVMEEMLLKAN-IPYQIVGG 65 (333)
T ss_dssp HHHHHHHHHHHHHTTTSCCGGGEEEEESSGGGHHHHHHHHHHTT-CCEEEETS
T ss_pred HHHHHHHHHHHHHHcCCCCcCCEEEEEECcHhHHHHHHHHHHCC-CCEEEeCC
Confidence 4455666665554422 344678999999999999999999987 77665544
No 76
>d1f1ja_ c.17.1.1 (A:) Caspase-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.36 E-value=45 Score=24.58 Aligned_cols=48 Identities=10% Similarity=0.125 Sum_probs=37.1
Q ss_pred CcEEEEeCc--------------hHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhcc
Q 028124 54 LPMIVCCSS--------------RDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHT 103 (213)
Q Consensus 54 ~~~IIF~~~--------------~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g 103 (213)
+.+||+.|. ...++.|++.|++.| +.+. ++-+++.++-.+.+++|...
T Consensus 11 G~aLII~n~~f~~~~~l~~r~g~~~Da~~l~~~l~~lG-F~V~-~~~nl~~~em~~~l~~~~~~ 72 (245)
T d1f1ja_ 11 GKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLG-FDVI-VYNDCSCAKMQDLLKKASEE 72 (245)
T ss_dssp EEEEEEECCCCCTTTTCCCCTTHHHHHHHHHHHHHHHT-EEEE-EEESCCHHHHHHHHHHHHHS
T ss_pred cEEEEEeCcCCCCcCCCCCCCChHHHHHHHHHHHHHCC-CEEE-EecCCCHHHHHHHHHHHHHH
Confidence 467777662 358899999999998 5654 55579999999999999764
No 77
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}
Probab=26.22 E-value=1.2e+02 Score=22.35 Aligned_cols=48 Identities=15% Similarity=0.289 Sum_probs=34.7
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHH-HHHHHHHH
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETE-RTLILEEF 100 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~-R~~~l~~F 100 (213)
.+-++++...+.+.++.+.+.+...+ ..+..+..|++..+ ....+++.
T Consensus 31 ~Ga~V~~~~r~~~~l~~~~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~ 79 (259)
T d2ae2a_ 31 LGASVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSSRSERQELMNTV 79 (259)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHhcC-CCceEEEeeCCCHHHHHHHHHHH
Confidence 35678888888888889999998876 58888888886443 34444443
No 78
>d1nw9b_ c.17.1.1 (B:) Caspase-9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.57 E-value=63 Score=23.92 Aligned_cols=50 Identities=16% Similarity=0.195 Sum_probs=35.5
Q ss_pred CCCcEEEEeCc--------------hHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhcc
Q 028124 52 PGLPMIVCCSS--------------RDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHT 103 (213)
Q Consensus 52 ~~~~~IIF~~~--------------~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g 103 (213)
+-+.+||+.|. ...++.|++.|+..| +.+ .++-+++.++-.+.+.+|...
T Consensus 20 prG~aLII~n~~f~~~~~l~~r~Ga~~Da~~l~~~l~~lG-F~V-~~~~nlt~~~~~~~l~~~~~~ 83 (277)
T d1nw9b_ 20 PCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLH-FMV-EVKGDLTAKKMVLALLELARQ 83 (277)
T ss_dssp SCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTT-EEE-EEEESCCHHHHHHHHHHHHHS
T ss_pred cccEEEEEeCccCCCccCCCCCCCcHHHHHHHHHHHHHCC-CEE-EEeeCCCHHHHHHHHHHhhhh
Confidence 34567777772 357889999999888 565 455578887777777777553
No 79
>g1sc3.1 c.17.1.1 (A:,B:) Interleukin-1beta converting enzyme (a cysteine protease) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.36 E-value=95 Score=22.81 Aligned_cols=46 Identities=22% Similarity=0.429 Sum_probs=35.6
Q ss_pred cEEEEeCc-----------hHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhc
Q 028124 55 PMIVCCSS-----------RDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRH 102 (213)
Q Consensus 55 ~~IIF~~~-----------~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~ 102 (213)
-+||++|. ...++.|++.|+..| +++. ++-+++..+-.+.+++|..
T Consensus 40 vALIIgn~~y~~~~~l~g~~~Da~~l~~~l~~lG-F~V~-~~~nlt~~e~~~~l~~~~~ 96 (261)
T g1sc3.1 40 LALIICNEEFDSIPRRTGAEVDITGMTMLLQNLG-YSVD-VKKNLTASDMTTELEAFAH 96 (261)
T ss_dssp EEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTT-CEEE-EEESCCHHHHHHHHHHHHT
T ss_pred EEEEEeccccCCCccCCChHHHHHHHHHHHHHCC-CEEE-EeeCCCHHHHHHHHHHHhh
Confidence 38888773 457889999999988 6654 4557888888889998865
No 80
>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=23.85 E-value=81 Score=20.86 Aligned_cols=22 Identities=0% Similarity=0.019 Sum_probs=11.4
Q ss_pred chHHHHHHHHHHhccCCceEEEe
Q 028124 62 SRDELDAVCSAVSNLADISFSSL 84 (213)
Q Consensus 62 ~~~~~~~l~~~L~~~~~~~~~~l 84 (213)
|...|+.|++.|...| +.+..+
T Consensus 17 Te~~A~~i~~~l~~~g-~~v~~~ 38 (148)
T d1vmea1 17 VENVMKKAIDSLKEKG-FTPVVY 38 (148)
T ss_dssp HHHHHHHHHHHHHHTT-CEEEEE
T ss_pred HHHHHHHHHHHHHhCC-CeEEEE
Confidence 4455555555555555 444443
No 81
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}
Probab=23.59 E-value=31 Score=26.38 Aligned_cols=39 Identities=8% Similarity=0.221 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccC
Q 028124 35 KMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLA 77 (213)
Q Consensus 35 K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~ 77 (213)
..+.|.++.+.+ .+++++++||++..+++++.+.|+..|
T Consensus 183 p~~~l~~~~~~L----KpGG~lv~~~P~~~Qv~~~~~~l~~~g 221 (266)
T d1o54a_ 183 PWNYIDKCWEAL----KGGGRFATVCPTTNQVQETLKKLQELP 221 (266)
T ss_dssp GGGTHHHHHHHE----EEEEEEEEEESSHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhhc----CCCCEEEEEeCcccHHHHHHHHHHHCC
Confidence 445666665552 468999999999999999999998876
No 82
>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}
Probab=23.32 E-value=1.3e+02 Score=21.92 Aligned_cols=40 Identities=10% Similarity=0.187 Sum_probs=29.9
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHH
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETER 93 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R 93 (213)
.+.++++...+.+.++.+++.+...+ .+..+..|++..+-
T Consensus 29 ~Ga~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~ 68 (251)
T d1zk4a1 29 EGAKVMITGRHSDVGEKAAKSVGTPD--QIQFFQHDSSDEDG 68 (251)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHCCTT--TEEEEECCTTCHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHhCCCC--cEEEEEccCCCHHH
Confidence 46788888888888888888886543 67778888865543
No 83
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}
Probab=23.15 E-value=1.3e+02 Score=21.96 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=31.3
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHH
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETER 93 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R 93 (213)
.+.++++.-.+.+.++.+.+.+...+ .++..+..|++..+.
T Consensus 28 ~Ga~V~~~~r~~~~l~~~~~~~~~~g-~~~~~~~~Dv~~~~~ 68 (260)
T d1zema1 28 EGTAIALLDMNREALEKAEASVREKG-VEARSYVCDVTSEEA 68 (260)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHTTT-SCEEEEECCTTCHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHH
Confidence 35677777777888889999998876 588888888865443
No 84
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}
Probab=22.91 E-value=1.1e+02 Score=21.25 Aligned_cols=37 Identities=5% Similarity=-0.084 Sum_probs=24.7
Q ss_pred CCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCC
Q 028124 50 RRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSD 87 (213)
Q Consensus 50 ~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~ 87 (213)
...+++++|+-.+.---..++..|.+.| .++.....+
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G-~~V~~~~r~ 56 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEG-AEVVLCGRK 56 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhc-cchhhcccc
Confidence 4556777777777777777777777776 465554443
No 85
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=22.86 E-value=91 Score=19.95 Aligned_cols=68 Identities=13% Similarity=0.139 Sum_probs=44.1
Q ss_pred EEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhcc
Q 028124 26 YVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHT 103 (213)
Q Consensus 26 ~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g 103 (213)
.+.++++..-.+.+..+|+. .+-.++-.+.+-..+-.. ++... +.++.+.-.||.....+++++++..
T Consensus 4 ILivDD~~~~~~~l~~~L~~------~g~~v~~~a~~~~~al~~---~~~~~-~dliilD~~mp~~~G~e~~~~ir~~ 71 (118)
T d1u0sy_ 4 VLIVDDAAFMRMMLKDIITK------AGYEVAGEATNGREAVEK---YKELK-PDIVTMDITMPEMNGIDAIKEIMKI 71 (118)
T ss_dssp EEEECSCHHHHHHHHHHHHH------TTCEEEEEESSHHHHHHH---HHHHC-CSEEEEECSCGGGCHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHH------cCCceEEEECCHHHHHHH---HHhcc-CCEEEEecCCCCCCHHHHHHHHHHh
Confidence 34566666556666666665 345555455554444333 33333 5788888899999999999998764
No 86
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=22.69 E-value=93 Score=20.02 Aligned_cols=68 Identities=12% Similarity=0.061 Sum_probs=44.4
Q ss_pred EEEEecCcchHHHHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHHHHHHhcc
Q 028124 25 FYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHT 103 (213)
Q Consensus 25 ~~~~~~~~~~K~~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~l~~Fr~g 103 (213)
..+.++++..-...+..+|+. .+-++..+.+..+ + .+.+.... +.++.+.-.||.....+++++.+..
T Consensus 5 ~ILIVDDd~~~~~~l~~~L~~------~g~~v~~a~~~~~-a---~~~l~~~~-~dlii~D~~mp~~~G~el~~~l~~~ 72 (123)
T d1krwa_ 5 IVWVVDDDSSIRWVLERALAG------AGLTCTTFENGNE-V---LAALASKT-PDVLLSDIRMPGMDGLALLKQIKQR 72 (123)
T ss_dssp EEEEESSSHHHHHHHHHHHHH------TTCEEEEESSSHH-H---HHHHTTCC-CSEEEECCSSSSSTTHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHH------CCCEEEEeCCHHH-H---HHHHHhCC-CCEEEehhhcCCchHHHHHHHHHHh
Confidence 355677776566667777766 3456666544432 2 33444444 6888888888888888888888763
No 87
>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}
Probab=22.40 E-value=1.4e+02 Score=21.86 Aligned_cols=51 Identities=12% Similarity=0.096 Sum_probs=32.2
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCC--HHHHHHHHHHHhc
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLA--ETERTLILEEFRH 102 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~--~~~R~~~l~~Fr~ 102 (213)
.+.+++|.+...+..+.+.+.....+...+..+.-+++ .++-.+.++....
T Consensus 28 ~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 28 RNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp TCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 46778887777777677766555555567777887875 2334444555444
No 88
>d1piia1 c.1.2.4 (A:255-452) N-(5'phosphoribosyl)antranilate isomerase, PRAI {Escherichia coli [TaxId: 562]}
Probab=21.98 E-value=1.1e+02 Score=21.70 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=34.5
Q ss_pred HHHHHHHHHhhcCCCCCCcEEEEeCchHHHHHHHHHHhccCCceEEEecCCCCHHHHHHH
Q 028124 37 ETLVELLHLVVAGRRPGLPMIVCCSSRDELDAVCSAVSNLADISFSSLHSDLAETERTLI 96 (213)
Q Consensus 37 ~~L~~ll~~~~~~~~~~~~~IIF~~~~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R~~~ 96 (213)
+...++++. .+.+.+.||++.. .+.+.+.+...+ +..+-+||+-+++.-..+
T Consensus 40 ~~a~~i~~~-----~~~~~V~Vfv~~~--~~~i~~~~~~~~-~d~iQlHG~e~~~~~~~l 91 (198)
T d1piia1 40 EQAQEVMAA-----APLQYVGVFRNHD--IADVVDKAKVLS-LAAVQLHGNEEQLYIDTL 91 (198)
T ss_dssp HHHHHHHHH-----CCCEEEEEESSCC--HHHHHHHHHHHT-CSEEEECSCCCHHHHHHH
T ss_pred HHHHHhhhh-----cccccceeeeccc--hhhHHHhhhccc-ccceeecCCccHHHHHHH
Confidence 344555554 2457899998754 456666666655 789999999887654433
No 89
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.84 E-value=1.5e+02 Score=21.66 Aligned_cols=43 Identities=14% Similarity=0.339 Sum_probs=32.4
Q ss_pred CCCcEEEEeCchHHHHHHHHHHhccC-CceEEEecCCCCHHHHH
Q 028124 52 PGLPMIVCCSSRDELDAVCSAVSNLA-DISFSSLHSDLAETERT 94 (213)
Q Consensus 52 ~~~~~IIF~~~~~~~~~l~~~L~~~~-~~~~~~lhg~~~~~~R~ 94 (213)
.+.++++...+.+..+.+++.++..+ .-++..++.|++.++-.
T Consensus 33 ~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v 76 (257)
T d1xg5a_ 33 QGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDI 76 (257)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHH
Confidence 46788888888888899999998763 23788889998765543
No 90
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}
Probab=20.60 E-value=1.5e+02 Score=21.71 Aligned_cols=41 Identities=15% Similarity=0.198 Sum_probs=29.6
Q ss_pred CCCcEEEEeCc-hHHHHHHHHHHhccCCceEEEecCCCCHHHH
Q 028124 52 PGLPMIVCCSS-RDELDAVCSAVSNLADISFSSLHSDLAETER 93 (213)
Q Consensus 52 ~~~~~IIF~~~-~~~~~~l~~~L~~~~~~~~~~lhg~~~~~~R 93 (213)
.+.++++...+ .+.++.+.+.++..+ .++..+..|++..+-
T Consensus 30 ~G~~Vv~~~r~~~~~~~~~~~~~~~~g-~~~~~~~~Dvt~~~~ 71 (261)
T d1geea_ 30 EKAKVVVNYRSKEDEANSVLEEIKKVG-GEAIAVKGDVTVESD 71 (261)
T ss_dssp TTCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHH
T ss_pred CCCEEEEEeCCcHHHHHHHHHHHHhcC-CcEEEEEccCCCHHH
Confidence 35677666655 456888899998876 588888899875543
Done!