Query 028125
Match_columns 213
No_of_seqs 135 out of 1234
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 10:32:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028125.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028125hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gm2_A ATP-dependent CLP prote 100.0 2.2E-51 7.5E-56 337.4 19.1 179 18-196 15-204 (205)
2 3p2l_A ATP-dependent CLP prote 100.0 9.4E-50 3.2E-54 327.8 18.8 190 6-198 7-197 (201)
3 3qwd_A ATP-dependent CLP prote 100.0 1.8E-49 6.3E-54 326.5 19.0 190 6-198 4-194 (203)
4 1tg6_A Putative ATP-dependent 100.0 1.1E-47 3.7E-52 328.2 21.3 194 5-198 55-249 (277)
5 1yg6_A ATP-dependent CLP prote 100.0 2.1E-47 7.1E-52 312.2 19.1 189 6-197 3-192 (193)
6 2f6i_A ATP-dependent CLP prote 100.0 2.6E-46 9E-51 310.4 20.0 195 5-200 13-207 (215)
7 1y7o_A ATP-dependent CLP prote 100.0 2E-46 6.9E-51 311.8 17.9 192 6-199 22-215 (218)
8 2cby_A ATP-dependent CLP prote 100.0 3.1E-45 1.1E-49 302.6 18.6 180 19-198 15-194 (208)
9 3viv_A 441AA long hypothetical 100.0 6.6E-31 2.3E-35 219.7 14.6 160 31-196 10-174 (230)
10 3rst_A Signal peptide peptidas 99.9 2.9E-23 1E-27 174.4 17.0 167 32-201 6-218 (240)
11 3bf0_A Protease 4; bacterial, 99.9 3.8E-24 1.3E-28 200.4 12.6 156 42-200 69-267 (593)
12 3bf0_A Protease 4; bacterial, 99.9 1.5E-21 5E-26 182.9 13.2 167 31-200 303-508 (593)
13 2ej5_A Enoyl-COA hydratase sub 99.2 2.4E-10 8.2E-15 96.2 13.9 149 32-199 14-185 (257)
14 2pbp_A Enoyl-COA hydratase sub 99.2 3.2E-10 1.1E-14 95.5 14.6 146 32-199 16-186 (258)
15 1uiy_A Enoyl-COA hydratase; ly 99.2 4.3E-10 1.5E-14 94.4 13.4 148 32-199 10-184 (253)
16 1sg4_A 3,2-trans-enoyl-COA iso 99.2 3.8E-10 1.3E-14 95.2 13.1 149 32-199 16-190 (260)
17 3lke_A Enoyl-COA hydratase; ny 99.1 2.1E-10 7.2E-15 97.0 10.4 145 32-198 15-192 (263)
18 2a7k_A CARB; crotonase, antibi 99.1 5.1E-10 1.8E-14 93.8 12.3 147 32-198 11-183 (250)
19 2uzf_A Naphthoate synthase; ly 99.1 9.5E-10 3.3E-14 93.4 14.0 147 31-199 23-198 (273)
20 1hzd_A AUH, AU-binding protein 99.1 1.4E-09 4.7E-14 92.4 14.4 149 32-199 23-196 (272)
21 2ppy_A Enoyl-COA hydratase; be 99.1 1.3E-09 4.4E-14 92.1 14.0 149 32-199 20-193 (265)
22 3qmj_A Enoyl-COA hydratase, EC 99.1 2.2E-09 7.5E-14 90.3 13.2 150 32-200 17-191 (256)
23 2vx2_A Enoyl-COA hydratase dom 99.1 1.8E-09 6E-14 92.5 12.7 148 32-199 44-216 (287)
24 2q35_A CURF; crotonase, lyase; 99.1 1.2E-09 4.1E-14 91.3 11.4 146 32-199 14-181 (243)
25 3p5m_A Enoyl-COA hydratase/iso 99.1 1.5E-09 5.2E-14 91.3 12.0 150 31-199 16-183 (255)
26 3gow_A PAAG, probable enoyl-CO 99.1 4.5E-09 1.5E-13 88.3 14.8 149 32-199 11-182 (254)
27 4di1_A Enoyl-COA hydratase ECH 99.0 2.4E-09 8.3E-14 91.3 12.9 151 31-200 34-207 (277)
28 2f6q_A Peroxisomal 3,2-trans-e 99.0 6.7E-09 2.3E-13 88.5 15.6 148 32-199 37-212 (280)
29 3pea_A Enoyl-COA hydratase/iso 99.0 3.1E-09 1E-13 89.7 13.2 146 32-199 17-189 (261)
30 3fdu_A Putative enoyl-COA hydr 99.0 9.8E-09 3.3E-13 86.9 16.3 146 31-195 15-186 (266)
31 1mj3_A Enoyl-COA hydratase, mi 99.0 8.2E-10 2.8E-14 93.2 9.0 146 32-199 18-188 (260)
32 1dci_A Dienoyl-COA isomerase; 99.0 2.4E-09 8.2E-14 90.9 11.9 149 32-198 15-199 (275)
33 3kqf_A Enoyl-COA hydratase/iso 99.0 4.7E-09 1.6E-13 88.8 13.6 149 32-199 20-193 (265)
34 3moy_A Probable enoyl-COA hydr 99.0 1.9E-09 6.3E-14 91.2 10.9 147 32-200 21-192 (263)
35 3h81_A Enoyl-COA hydratase ECH 99.0 1.3E-09 4.3E-14 93.1 9.9 173 8-199 11-206 (278)
36 1wz8_A Enoyl-COA hydratase; ly 99.0 3.5E-09 1.2E-13 89.5 12.5 149 32-199 22-195 (264)
37 3g64_A Putative enoyl-COA hydr 99.0 4.6E-09 1.6E-13 89.4 13.3 151 31-200 27-206 (279)
38 1nzy_A Dehalogenase, 4-chlorob 99.0 3.6E-09 1.2E-13 89.6 11.6 145 32-198 14-190 (269)
39 1szo_A 6-oxocamphor hydrolase; 99.0 5.2E-09 1.8E-13 88.2 11.8 147 32-198 27-198 (257)
40 3l3s_A Enoyl-COA hydratase/iso 99.0 3.9E-09 1.3E-13 89.2 10.9 148 32-199 18-194 (263)
41 3rsi_A Putative enoyl-COA hydr 98.9 4E-09 1.4E-13 89.2 10.6 151 31-200 19-194 (265)
42 3i47_A Enoyl COA hydratase/iso 98.9 1.3E-08 4.6E-13 86.2 13.8 149 32-200 15-190 (268)
43 1ef8_A Methylmalonyl COA decar 98.9 3.2E-09 1.1E-13 89.5 9.9 147 32-198 15-186 (261)
44 3he2_A Enoyl-COA hydratase ECH 98.9 9.3E-09 3.2E-13 87.1 12.7 145 32-196 32-195 (264)
45 3myb_A Enoyl-COA hydratase; ss 98.9 6.6E-09 2.2E-13 88.9 11.6 148 32-199 37-209 (286)
46 1pjh_A Enoyl-COA isomerase; EC 98.9 2E-08 6.8E-13 85.5 14.1 147 32-197 20-202 (280)
47 3sll_A Probable enoyl-COA hydr 98.9 1.3E-08 4.6E-13 87.1 13.1 150 32-200 35-216 (290)
48 3qk8_A Enoyl-COA hydratase ECH 98.9 4.1E-09 1.4E-13 89.5 9.8 147 32-200 25-199 (272)
49 3t8b_A 1,4-dihydroxy-2-naphtho 98.9 1.6E-08 5.5E-13 88.4 13.7 145 33-199 69-259 (334)
50 3r6h_A Enoyl-COA hydratase, EC 98.9 1.9E-08 6.6E-13 83.5 13.5 149 32-200 16-187 (233)
51 4fzw_C 1,2-epoxyphenylacetyl-C 98.9 2.5E-08 8.6E-13 84.8 14.4 150 32-200 26-203 (274)
52 2j5i_A P-hydroxycinnamoyl COA 98.9 4.6E-09 1.6E-13 89.3 9.8 148 32-198 20-196 (276)
53 3t89_A 1,4-dihydroxy-2-naphtho 98.9 7.4E-09 2.5E-13 88.7 11.0 146 32-200 39-215 (289)
54 4f47_A Enoyl-COA hydratase ECH 98.9 2.8E-09 9.5E-14 90.8 8.0 147 31-199 30-206 (278)
55 4eml_A Naphthoate synthase; 1, 98.9 8.5E-09 2.9E-13 87.7 10.9 147 32-200 21-201 (275)
56 2j5g_A ALR4455 protein; enzyme 98.9 5E-09 1.7E-13 88.7 9.4 145 32-199 35-208 (263)
57 3ot6_A Enoyl-COA hydratase/iso 98.9 7.9E-08 2.7E-12 79.7 16.1 148 32-200 17-187 (232)
58 2gtr_A CDY-like, chromodomain 98.9 3E-08 1E-12 83.6 13.6 148 32-199 16-192 (261)
59 3oc7_A Enoyl-COA hydratase; se 98.9 1.6E-08 5.6E-13 85.4 12.1 143 31-193 21-192 (267)
60 2f9y_A Acetyl-COA carboxylase, 98.9 9.9E-09 3.4E-13 89.9 10.9 129 37-196 152-290 (339)
61 3isa_A Putative enoyl-COA hydr 98.9 1.7E-08 5.7E-13 84.9 11.9 145 32-199 18-186 (254)
62 3pe8_A Enoyl-COA hydratase; em 98.9 3.8E-09 1.3E-13 89.1 7.8 147 32-200 20-184 (256)
63 3hrx_A Probable enoyl-COA hydr 98.9 5.7E-08 1.9E-12 81.5 14.9 150 32-200 11-183 (254)
64 2f9i_A Acetyl-coenzyme A carbo 98.9 1.3E-08 4.4E-13 88.8 11.1 129 37-196 138-276 (327)
65 3rrv_A Enoyl-COA hydratase/iso 98.9 1E-08 3.5E-13 87.3 10.2 141 32-194 39-208 (276)
66 2fbm_A Y chromosome chromodoma 98.9 3.8E-08 1.3E-12 84.4 13.8 148 32-199 34-210 (291)
67 3swx_A Probable enoyl-COA hydr 98.9 2.7E-08 9.1E-13 84.1 12.4 150 31-199 19-193 (265)
68 3qxz_A Enoyl-COA hydratase/iso 98.8 2.6E-09 9E-14 90.3 5.9 149 32-199 18-189 (265)
69 3njd_A Enoyl-COA hydratase; ss 98.8 2E-08 6.7E-13 87.7 11.6 146 32-199 46-245 (333)
70 3h0u_A Putative enoyl-COA hydr 98.8 1.7E-08 5.7E-13 86.6 10.9 147 31-199 18-195 (289)
71 4fzw_A 2,3-dehydroadipyl-COA h 98.8 6.5E-08 2.2E-12 81.4 14.3 150 32-200 16-187 (258)
72 3lao_A Enoyl-COA hydratase/iso 98.8 2.3E-08 7.7E-13 84.2 10.8 147 31-199 22-196 (258)
73 3hin_A Putative 3-hydroxybutyr 98.8 7.8E-08 2.7E-12 81.8 13.3 148 32-200 27-198 (275)
74 3trr_A Probable enoyl-COA hydr 98.8 2.5E-08 8.5E-13 83.9 10.1 150 31-200 17-185 (256)
75 3gkb_A Putative enoyl-COA hydr 98.8 2.6E-08 8.9E-13 85.2 10.4 149 32-199 20-198 (287)
76 2w3p_A Benzoyl-COA-dihydrodiol 98.8 1.4E-08 4.6E-13 93.5 9.1 141 40-198 55-224 (556)
77 3qre_A Enoyl-COA hydratase, EC 98.8 1E-08 3.5E-13 88.2 7.0 148 31-200 40-222 (298)
78 3qxi_A Enoyl-COA hydratase ECH 98.7 3.7E-08 1.3E-12 83.3 9.8 150 31-200 25-194 (265)
79 3t3w_A Enoyl-COA hydratase; ss 98.7 7.9E-08 2.7E-12 81.8 11.6 147 32-199 31-206 (279)
80 3r9q_A Enoyl-COA hydratase/iso 98.7 1.4E-08 4.9E-13 85.7 6.9 147 32-200 22-193 (262)
81 3r9t_A ECHA1_1; ssgcid, seattl 98.7 6.5E-08 2.2E-12 81.8 10.9 151 31-200 19-193 (267)
82 3tlf_A Enoyl-COA hydratase/iso 98.7 4.3E-08 1.5E-12 83.2 8.9 149 32-200 22-203 (274)
83 4hdt_A 3-hydroxyisobutyryl-COA 98.7 2.6E-07 8.8E-12 81.3 14.1 148 32-199 20-195 (353)
84 3hp0_A Putative polyketide bio 98.7 2.2E-07 7.7E-12 78.6 12.4 145 32-197 18-188 (267)
85 3bpt_A 3-hydroxyisobutyryl-COA 98.7 3E-07 1E-11 81.0 13.6 148 32-199 17-192 (363)
86 3ju1_A Enoyl-COA hydratase/iso 98.6 1.2E-07 4E-12 85.0 10.3 150 32-201 53-234 (407)
87 3m6n_A RPFF protein; enoyl-COA 98.6 5.3E-07 1.8E-11 77.7 13.0 142 40-200 60-232 (305)
88 1wdk_A Fatty oxidation complex 98.6 6.6E-07 2.3E-11 85.3 14.5 145 32-198 18-193 (715)
89 3zwc_A Peroxisomal bifunctiona 98.5 1.5E-06 5E-11 83.2 14.5 146 31-198 31-196 (742)
90 2bzr_A Propionyl-COA carboxyla 98.5 7E-07 2.4E-11 82.7 11.7 90 38-131 361-464 (548)
91 2np9_A DPGC; protein inhibitor 98.5 6.9E-07 2.4E-11 80.6 10.4 147 32-198 178-373 (440)
92 2wtb_A MFP2, fatty acid multif 98.4 5.1E-07 1.7E-11 86.3 8.4 145 32-198 19-192 (725)
93 1vrg_A Propionyl-COA carboxyla 98.3 1.6E-06 5.5E-11 79.9 9.4 137 38-198 344-498 (527)
94 1on3_A Methylmalonyl-COA carbo 98.3 1.6E-06 5.5E-11 79.9 8.5 137 38-198 340-494 (523)
95 2f9y_B Acetyl-coenzyme A carbo 98.3 1.5E-06 5.3E-11 74.9 7.1 124 38-199 132-266 (304)
96 1pix_A Glutaconyl-COA decarbox 98.2 4E-06 1.4E-10 78.2 10.1 145 33-198 380-547 (587)
97 3n6r_B Propionyl-COA carboxyla 98.1 1.2E-05 4E-10 74.2 10.1 89 38-130 352-454 (531)
98 1x0u_A Hypothetical methylmalo 98.1 8.5E-07 2.9E-11 81.7 2.4 89 38-130 339-441 (522)
99 3iav_A Propionyl-COA carboxyla 98.0 2.7E-05 9.3E-10 71.7 9.9 89 38-130 346-448 (530)
100 3gf3_A Glutaconyl-COA decarbox 97.9 1.9E-05 6.5E-10 73.5 8.1 152 32-198 381-549 (588)
101 3u9r_B MCC beta, methylcrotony 97.9 3.7E-05 1.3E-09 71.1 9.4 89 37-129 365-467 (555)
102 2f9i_B Acetyl-coenzyme A carbo 97.7 6.5E-05 2.2E-09 64.1 7.2 125 38-200 135-270 (285)
103 2x24_A Acetyl-COA carboxylase; 97.3 0.0012 4.1E-08 63.3 10.0 99 30-131 453-568 (793)
104 3k8x_A Acetyl-COA carboxylase; 96.2 0.011 3.8E-07 56.3 8.0 99 30-130 438-553 (758)
105 3gf3_A Glutaconyl-COA decarbox 95.1 0.045 1.6E-06 50.9 7.1 90 38-131 120-222 (588)
106 1pix_A Glutaconyl-COA decarbox 94.7 0.099 3.4E-06 48.6 8.5 88 38-130 119-220 (587)
107 1vrg_A Propionyl-COA carboxyla 94.4 0.033 1.1E-06 51.2 4.5 89 38-130 112-210 (527)
108 3n6r_B Propionyl-COA carboxyla 94.1 0.059 2E-06 49.6 5.4 86 41-130 122-217 (531)
109 3iav_A Propionyl-COA carboxyla 93.5 0.1 3.4E-06 48.0 5.9 86 41-130 114-209 (530)
110 2bzr_A Propionyl-COA carboxyla 91.6 0.21 7.2E-06 46.1 5.4 84 43-130 127-220 (548)
111 1on3_A Methylmalonyl-COA carbo 91.4 0.15 5E-06 46.8 4.0 84 43-130 114-206 (523)
112 3u9r_B MCC beta, methylcrotony 91.2 0.29 1E-05 45.1 5.8 87 40-130 137-237 (555)
113 1x0u_A Hypothetical methylmalo 91.0 0.28 9.4E-06 45.0 5.5 83 44-130 111-204 (522)
114 2x24_A Acetyl-COA carboxylase; 86.3 0.92 3.1E-05 43.5 5.6 40 89-130 259-298 (793)
115 1fc6_A Photosystem II D1 prote 84.9 2.3 7.7E-05 37.0 7.2 69 42-111 211-305 (388)
116 3k8x_A Acetyl-COA carboxylase; 78.8 2.3 7.8E-05 40.6 5.1 39 90-130 247-285 (758)
117 3k50_A Putative S41 protease; 78.0 3.8 0.00013 36.1 6.0 68 45-113 209-314 (403)
118 1oi7_A Succinyl-COA synthetase 73.9 6.3 0.00022 32.9 6.1 66 32-101 173-238 (288)
119 3mwd_B ATP-citrate synthase; A 69.4 12 0.0004 32.2 6.9 65 31-102 196-264 (334)
120 2nu8_A Succinyl-COA ligase [AD 69.4 9.8 0.00034 31.6 6.3 68 30-101 171-238 (288)
121 2fp4_A Succinyl-COA ligase [GD 69.2 9.3 0.00032 32.2 6.1 67 32-101 181-250 (305)
122 2yv2_A Succinyl-COA synthetase 65.7 9.5 0.00032 31.9 5.5 67 32-101 180-246 (297)
123 2yv1_A Succinyl-COA ligase [AD 61.8 11 0.00037 31.5 5.1 65 32-101 179-243 (294)
124 1j7x_A IRBP, interphotorecepto 59.4 12 0.00043 31.1 5.1 52 59-110 138-223 (302)
125 3pff_A ATP-citrate synthase; p 58.8 19 0.00066 34.7 6.8 65 32-103 683-751 (829)
126 1k32_A Tricorn protease; prote 56.2 31 0.001 33.3 7.9 79 27-110 847-947 (1045)
127 3zxn_A RSBS, anti-sigma-factor 53.8 16 0.00054 26.2 4.2 78 32-111 14-95 (123)
128 3dmy_A Protein FDRA; predicted 53.2 16 0.00054 33.0 4.9 66 32-102 141-211 (480)
129 2kpt_A Putative secreted prote 37.2 27 0.00092 26.1 3.3 46 30-75 14-59 (148)
130 3lfh_A Manxa, phosphotransfera 35.8 85 0.0029 23.1 5.9 93 9-108 6-103 (144)
131 3ufx_B Succinyl-COA synthetase 34.5 37 0.0013 29.6 4.2 55 45-101 286-345 (397)
132 1uqr_A 3-dehydroquinate dehydr 32.1 58 0.002 24.7 4.4 49 46-99 55-103 (154)
133 2csu_A 457AA long hypothetical 31.9 77 0.0026 28.0 5.9 65 30-101 176-241 (457)
134 3ds8_A LIN2722 protein; unkonw 30.9 51 0.0018 25.9 4.2 27 4-30 2-28 (254)
135 1gqo_A Dehydroquinase; dehydra 30.7 57 0.0019 24.5 4.1 49 46-99 54-102 (143)
136 2i6e_A Hypothetical protein; N 29.2 71 0.0024 26.3 5.0 50 145-195 228-288 (301)
137 1th8_B Anti-sigma F factor ant 28.8 72 0.0025 21.4 4.3 37 32-68 14-50 (116)
138 3lwz_A 3-dehydroquinate dehydr 28.4 58 0.002 24.7 3.8 48 47-99 62-109 (153)
139 2nxo_A Hypothetical protein SC 28.2 50 0.0017 26.7 3.8 47 149-195 220-277 (291)
140 4hyl_A Stage II sporulation pr 27.0 86 0.0029 21.3 4.4 27 31-57 14-40 (117)
141 1h4x_A SPOIIAA, anti-sigma F f 26.7 69 0.0024 21.7 3.8 37 32-68 13-49 (117)
142 2uyg_A 3-dehydroquinate dehydr 26.3 82 0.0028 23.8 4.3 50 46-99 53-102 (149)
143 3ksx_A Nitrate transport prote 25.4 2.2E+02 0.0076 22.8 7.4 54 147-200 242-310 (324)
144 4h08_A Putative hydrolase; GDS 25.3 1.3E+02 0.0044 22.2 5.5 63 32-100 22-85 (200)
145 1pdo_A Mannose permease; phosp 25.0 1.9E+02 0.0065 20.6 8.4 91 9-104 4-97 (135)
146 1sbo_A Putative anti-sigma fac 24.3 1.2E+02 0.0041 19.9 4.7 37 32-68 15-51 (110)
147 2nu8_B SCS-beta, succinyl-COA 24.1 1.8E+02 0.0062 25.0 6.8 61 46-108 296-361 (388)
148 2c4w_A 3-dehydroquinate dehydr 23.8 86 0.0029 24.3 4.1 49 47-99 66-114 (176)
149 2x26_A Periplasmic aliphatic s 23.1 2.7E+02 0.0091 21.9 7.3 53 152-204 221-288 (308)
150 3fle_A SE_1780 protein; struct 22.9 1.4E+02 0.0049 23.6 5.6 15 16-30 17-31 (249)
151 2csu_A 457AA long hypothetical 22.7 2.8E+02 0.0097 24.2 7.9 63 31-96 342-410 (457)
152 3aek_A Light-independent proto 22.7 1.3E+02 0.0046 26.1 5.7 16 3-18 146-161 (437)
153 2r1j_L Repressor protein C2; p 22.7 1.1E+02 0.0039 18.0 4.0 32 155-186 21-52 (68)
154 3bed_A PTS system, IIA compone 22.0 2.3E+02 0.0077 20.4 6.2 92 8-107 7-103 (142)
155 1h05_A 3-dehydroquinate dehydr 21.7 82 0.0028 23.7 3.5 48 47-99 57-104 (146)
156 2kln_A Probable sulphate-trans 21.6 75 0.0026 22.3 3.3 38 30-67 15-54 (130)
157 1adr_A P22 C2 repressor; trans 21.6 1.2E+02 0.0042 18.4 4.0 32 155-186 21-52 (76)
158 3kip_A 3-dehydroquinase, type 21.4 85 0.0029 24.1 3.6 29 71-99 91-119 (167)
159 2k9q_A Uncharacterized protein 21.0 1.2E+02 0.0041 18.8 3.9 31 155-185 18-48 (77)
160 3ny7_A YCHM protein, sulfate t 20.8 2.1E+02 0.0072 19.6 9.8 78 32-111 19-97 (118)
161 4gud_A Imidazole glycerol phos 20.3 86 0.0029 23.9 3.6 34 62-99 42-82 (211)
162 1jub_A Dihydroorotate dehydrog 20.3 1.6E+02 0.0055 24.0 5.5 53 45-98 105-167 (311)
163 4dik_A Flavoprotein; TM0755, e 20.0 1.4E+02 0.0048 25.9 5.2 42 61-102 320-364 (410)
No 1
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=100.00 E-value=2.2e-51 Score=337.40 Aligned_cols=179 Identities=28% Similarity=0.455 Sum_probs=168.9
Q ss_pred CCchhhhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHh
Q 028125 18 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQS 87 (213)
Q Consensus 18 ~~~~~~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~ 87 (213)
...|+|+|++||++|+|||+|+|++++++.++++|++|+.+++.++|+|+||||| |+|++|++|||+|+.
T Consensus 15 ~~~~~di~s~Ll~~Riifl~~~I~d~~a~~iiaqLl~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~v~aglaIyd~m~~ 94 (205)
T 4gm2_A 15 ENLYFQGPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGITDVISIVDVINY 94 (205)
T ss_dssp -------CHHHHTTTEEEECSCCCHHHHHHHHHHHHHHHHHCTTCCEEEEEEECTTEETTEESCTTHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHhcCCEEEECCEEcHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCCHHHHHHHHHHHHh
Confidence 3569999999999999999999999999999999999999888999999999999 999999999999999
Q ss_pred cCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC-CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 88 LKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 88 ~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~-~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
++.||+|+|.|.|||+|++|++||++++|++.|||++|+|||+++. .|++.|+..+++++.++++.+.++|+++||++.
T Consensus 95 ~~~~V~t~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~ 174 (205)
T 4gm2_A 95 ISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTEKDT 174 (205)
T ss_dssp SSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCCSSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCH
T ss_pred cCCCEEEEEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 9999999999999999999999999999999999999999999988 999999999999999999999999999999999
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCC
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRP 196 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~ 196 (213)
+++.+++++++||||+||++|||||+|+++
T Consensus 175 e~I~~~m~rd~~msa~EA~eyGlID~V~~~ 204 (205)
T 4gm2_A 175 NVISNVLERDKYFNADEAVDFKLIDHILEK 204 (205)
T ss_dssp HHHHHHTTSCEEEEHHHHHHTTSCSEECCC
T ss_pred HHHHHHhcCCcccCHHHHHHcCCccEeecC
Confidence 999999999999999999999999999875
No 2
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=100.00 E-value=9.4e-50 Score=327.76 Aligned_cols=190 Identities=41% Similarity=0.733 Sum_probs=178.6
Q ss_pred CCeeeeecC-CCCCCchhhhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHH
Q 028125 6 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDT 84 (213)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~ 84 (213)
+|.|..+++ |+.. +|+|++|+++|+|+|+|+|++++++.++++|++++.+++.++|+|+||||||++++++.||+.
T Consensus 7 ~p~~~~~~~~~~~~---~d~~~~l~~~riI~l~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~ 83 (201)
T 3p2l_A 7 VPTVIEKTAGGERA---FDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTAGMGVYDT 83 (201)
T ss_dssp SSEECCC-----CC---EEHHHHHHHTTEEEEESCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHH
T ss_pred CCeeeeeCCCCCcc---cCHHHHhhCCCEEEEcCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHHH
Confidence 677777666 6655 799999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 028125 85 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQ 164 (213)
Q Consensus 85 i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~ 164 (213)
|+.++.||+|+|.|.|||+|++|+++|++++|++.|+|++|+|+|+++..|+++|+..+++++.++++.+.++|+++||+
T Consensus 84 i~~~~~~v~t~~~G~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~ 163 (201)
T 3p2l_A 84 MQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQ 163 (201)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHHTSSTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHhCCCeEEEEcCEehhHHHHHHHcCccCCEEEcCCCeEEEeccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred CHHHHHHHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 165 PFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 165 ~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
+.+++.+++++++||||+||+++||||+|.++.+
T Consensus 164 ~~e~i~~~~~~~~~lta~EA~e~GliD~I~~~~~ 197 (201)
T 3p2l_A 164 DLETIVKDTDRDNFMMADEAKAYGLIDHVIESRE 197 (201)
T ss_dssp CHHHHHHHTSSCEEEEHHHHHHHTSCSEECCCSC
T ss_pred CHHHHHHHhhcCeeecHHHHHHcCCccEecCCHH
Confidence 9999999999999999999999999999998754
No 3
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=100.00 E-value=1.8e-49 Score=326.49 Aligned_cols=190 Identities=42% Similarity=0.754 Sum_probs=178.5
Q ss_pred CCeeeeecC-CCCCCchhhhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHH
Q 028125 6 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDT 84 (213)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~ 84 (213)
+|.|.-+++ ||.. +|+|++|+++|+|+|+|+|++.+++.++++|++++.+++.++|+|+||||||+|++++.||+.
T Consensus 4 ~p~~~~~~~~~~~~---~d~~~~l~~~riI~l~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~~~~~I~~~ 80 (203)
T 3qwd_A 4 IPTVIETTNRGERA---YDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDT 80 (203)
T ss_dssp CCEEECC-----CE---EEHHHHHHHTTEEEECSCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHH
T ss_pred CCeeeeecCCCCcc---cCHHHHHhcCCEEEEcCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHH
Confidence 677776666 6555 799999999999999999999999999999999998888899999999999999999999999
Q ss_pred HHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 028125 85 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQ 164 (213)
Q Consensus 85 i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~ 164 (213)
|+.++.||+|+|.|.|||+|++|+++|++++|++.|||++|+|+|+++..|+++|++.++++++++++.+.++|+++||+
T Consensus 81 i~~~~~~V~t~~~G~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~ 160 (203)
T 3qwd_A 81 IQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQ 160 (203)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEECCCCSSSTTTTSCHHHHHHHHHTTHHHHHHHHHHHHHCC
T ss_pred HHHhcCCcEEEEeeeehhHHHHHHHcCCcCeEEEcCCceEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999998789999999999999999899999999999999999999999999999999
Q ss_pred CHHHHHHHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 165 PFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 165 ~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
+.+++.+++++++||||+||+++||||+|.++.+
T Consensus 161 ~~e~i~~~~~~d~~lta~EA~e~GliD~I~~~~~ 194 (203)
T 3qwd_A 161 SIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPET 194 (203)
T ss_dssp CHHHHHHHHTSCCCEEHHHHHHHTSCSEECCCCC
T ss_pred CHHHHHHHhhcCceecHHHHHHcCCcCEecCCcc
Confidence 9999999999999999999999999999998874
No 4
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=100.00 E-value=1.1e-47 Score=328.17 Aligned_cols=194 Identities=35% Similarity=0.628 Sum_probs=175.6
Q ss_pred CCCeeeeecCCCC-CCchhhhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHH
Q 028125 5 GTPKVLYRTPGEG-SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYD 83 (213)
Q Consensus 5 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~ 83 (213)
+.|.+|+..+... ...|+|+|++|+++|+|+|+|+|+++.++.++++|++++.+++.++|+|+||||||+|++++.||+
T Consensus 55 ~~~~~p~~~~~~~~~~~~~di~s~ll~erII~l~G~I~d~~a~~iiaqL~~l~~ed~~k~I~L~INSPGGsV~ag~aIyd 134 (277)
T 1tg6_A 55 ALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYD 134 (277)
T ss_dssp --CCCCBCC---------CBHHHHHHTTTEEEEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHH
T ss_pred cCCCCCeeeccCCCCcccccHHHHhhcCcEEEEcCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHH
Confidence 4455565433221 245899999999999999999999999999999999998877789999999999999999999999
Q ss_pred HHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028125 84 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTG 163 (213)
Q Consensus 84 ~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg 163 (213)
+|+.++.||+|+|.|.|||+|++|+++|++++|+|.|||++|+|+|+++..|+.+|+...+++++++++.|.++|+++||
T Consensus 135 ~I~~~k~pV~t~v~G~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG 214 (277)
T 1tg6_A 135 TMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTK 214 (277)
T ss_dssp HHHHSCSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCEEEEEccEeHHHHHHHHHCCCcCCEEEecCCEEEEecccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred CCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 164 QPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 164 ~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
++.+++++++++++|||++||++|||||+|++..+
T Consensus 215 ~~~e~i~~~~drd~~lta~EAle~GLID~I~~~~~ 249 (277)
T 1tg6_A 215 QSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPP 249 (277)
T ss_dssp CCHHHHHHHHSSCEEECHHHHHHHTSCSEECSSCC
T ss_pred CCHHHHHHHHhcCcccCHHHHHHCCCCCEecCcch
Confidence 99999999999999999999999999999998754
No 5
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=100.00 E-value=2.1e-47 Score=312.21 Aligned_cols=189 Identities=40% Similarity=0.711 Sum_probs=179.2
Q ss_pred CCeeeeecC-CCCCCchhhhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHH
Q 028125 6 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDT 84 (213)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~ 84 (213)
+|+++.+++ |+ .|+|++++++++|+|+++|+|++.+++.++++|++++.+++.++|+|+||||||++++++.||++
T Consensus 3 ~p~~~~~~~~~~---~~~d~~~~l~~~rii~l~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~a~~~I~~~ 79 (193)
T 1yg6_A 3 VPMVIEQTSRGE---RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDT 79 (193)
T ss_dssp SCBCCSSSCSSC---CCCBHHHHHHTTTEEEEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHH
T ss_pred CCeecccCCCCc---chhhHHHHHhcCCEEEEcCEEcHHHHHHHHHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHH
Confidence 688888776 43 36999999999999999999999999999999999988877899999999999999999999999
Q ss_pred HHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 028125 85 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQ 164 (213)
Q Consensus 85 i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~ 164 (213)
|+.++.||+|+|.|.|||+|++|+++|++++|+|.|+|++|+|+|+.+..|+.+|+....++++++++.|.+.|+++||+
T Consensus 80 i~~~~~pV~~~v~g~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~ 159 (193)
T 1yg6_A 80 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ 159 (193)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCEEEEEeeeHHHHHHHHHHCCCcCcEEEecCcEEEEEeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999889999999999999998878999999999999999999999999999999
Q ss_pred CHHHHHHHhcCCceeCHHHHHHcCCceEecCCc
Q 028125 165 PFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 197 (213)
Q Consensus 165 ~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~ 197 (213)
+.+++++++++++|||++||+++||||+|+++.
T Consensus 160 ~~~~i~~~~~~~~~~ta~eA~~~GliD~i~~~~ 192 (193)
T 1yg6_A 160 SLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 192 (193)
T ss_dssp CHHHHHHHTSSCEEEEHHHHHHHTSSSEECCCC
T ss_pred CHHHHHHHhcCCeEEcHHHHHHcCCCCEecCCC
Confidence 999999999999999999999999999999764
No 6
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=100.00 E-value=2.6e-46 Score=310.38 Aligned_cols=195 Identities=29% Similarity=0.533 Sum_probs=168.4
Q ss_pred CCCeeeeecCCCCCCchhhhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHH
Q 028125 5 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDT 84 (213)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~ 84 (213)
|.-.++++-+..--..|+|++++++++++|+|.|+|++..++.++++|++++.+++ ++|+|+||||||+|++++.||++
T Consensus 13 ~~~~~~~~~~~~~~~~~~d~~~~l~~~riI~l~G~I~~~~a~~i~~~L~~l~~~~~-k~I~l~INSPGGsv~a~~~I~~~ 91 (215)
T 2f6i_A 13 GRENLYFQGHMDIKDMKKDVKLFFFKKRIIYLTDEINKKTADELISQLLYLDNINH-NDIKIYINSPGGSINEGLAILDI 91 (215)
T ss_dssp ---------CCCCSCSSHHHHHHHHTTTEEEECSCBCHHHHHHHHHHHHHHHHHCC-SCEEEEEEECCBCHHHHHHHHHH
T ss_pred cccccccCCCCccccccccHHHHHhCceEEEEccEECHHHHHHHHHHHHHHHhCCC-CcEEEEEECCCCCHHHHHHHHHH
Confidence 44456676664333569999999999999999999999999999999999988777 99999999999999999999999
Q ss_pred HHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 028125 85 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQ 164 (213)
Q Consensus 85 i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~ 164 (213)
|+.++.||+|+|.|.|||+|++|+++|++|+|+|.|+|++|+|+|+++..|+.+|+....+++..+++.+.++|+++||+
T Consensus 92 i~~~~~pV~t~v~g~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~ 171 (215)
T 2f6i_A 92 FNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQ 171 (215)
T ss_dssp HHHSSSCEEEEEEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCEEEEEeeEhHhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999888999999988999999999999999999999
Q ss_pred CHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 165 PFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 165 ~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
+.+++++++++++|||++||+++||||+|+++....
T Consensus 172 ~~e~i~~~~~~~~~lta~eA~e~GLiD~I~~~~~~~ 207 (215)
T 2f6i_A 172 TVETIEKDSDRDYYMNALEAKQYGIIDEVIETKLPH 207 (215)
T ss_dssp CHHHHHHHHHTTCEECHHHHHHHTSCSEECCCSSCC
T ss_pred CHHHHHHHHhCCeecCHHHHHHCCCCCEecCCcccc
Confidence 999999999999999999999999999999876543
No 7
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=100.00 E-value=2e-46 Score=311.76 Aligned_cols=192 Identities=32% Similarity=0.586 Sum_probs=165.6
Q ss_pred CCeeeeecCCCCCCchhhhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHH
Q 028125 6 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTM 85 (213)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i 85 (213)
+|+|+.++++. ..|+|++++|+++|+|++.|+|++.+++.++++|++++.+++.++|+|+||||||++++++.||++|
T Consensus 22 ~p~~~~~~~~~--~~~~d~~~~l~~~rii~l~g~I~~~~a~~i~~~L~~l~~~~~~k~I~l~InSPGG~v~ag~~I~~~i 99 (218)
T 1y7o_A 22 IPVVIEQTSRG--ERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTM 99 (218)
T ss_dssp CCEECC---------CEEHHHHHHHTTEEEEESCBCHHHHHHHHHHHHHHHHHCTTSCEEEEEEECCBCHHHHHHHHHHH
T ss_pred CceeeecCCCC--cchhhHHHHhhcCCEEEEeCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHH
Confidence 67776666553 3589999999999999999999999999999999999988889999999999999999999999999
Q ss_pred HhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC--CCChHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028125 86 QSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA--RGQADDIRNEADELLRVRDYIFKELSRKTG 163 (213)
Q Consensus 86 ~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~--~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg 163 (213)
+.+++||+|+|.|.|+|+|++|+++|++++|+|.|+|++|+|+|+.+. .|+.+|+....+++++++++|.+.|++++|
T Consensus 100 ~~~~~pV~t~v~G~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G 179 (218)
T 1y7o_A 100 NFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSG 179 (218)
T ss_dssp HHSSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEECCCCC--------------CHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCCCEEEEEccEeHHHHHHHHHcCCcCcEEEcCCcEEEEecccccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999776 788999999999999999999999999999
Q ss_pred CCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 164 QPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 164 ~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
++.+++.+++++++|||++||+++||||+|++.+++
T Consensus 180 ~~~~~i~~~~~~~~~~ta~EA~e~GLVD~v~~~~~~ 215 (218)
T 1y7o_A 180 QSMEKVHADAERDNWMSAQETLEYGFIDEIMANNSL 215 (218)
T ss_dssp CCHHHHHHHHHSCCCBCHHHHHHHTSCSEECCCC--
T ss_pred CCHHHHHHHHhCCCEEcHHHHHHCCCCcEEcCcCCC
Confidence 999999999999999999999999999999987763
No 8
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=100.00 E-value=3.1e-45 Score=302.59 Aligned_cols=180 Identities=37% Similarity=0.649 Sum_probs=163.6
Q ss_pred CchhhhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEcc
Q 028125 19 WQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVG 98 (213)
Q Consensus 19 ~~~~~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G 98 (213)
+.|++++++++++++|++.|+|++.+++.++++|++++.+++.++|+|+||||||++++++.||++|+.++.||+|+|.|
T Consensus 15 ~~~~~~~~~l~~~rii~l~G~I~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG~v~a~~~I~~~i~~~~~pV~~~v~g 94 (208)
T 2cby_A 15 SLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMVLAPCDIATYAMG 94 (208)
T ss_dssp CHHHHHHHHHHTTTEEEECSCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHCSSCEEEEEEE
T ss_pred cchhhHHHHhhcCcEEEEcCEECHHHHHHHHHHHHHHHhCCCCCCEEEEEECCCCCHHHHHHHHHHHHhcCCCEEEEECc
Confidence 56999999999999999999999999999999999998888899999999999999999999999999999999999999
Q ss_pred ccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCce
Q 028125 99 FAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 178 (213)
Q Consensus 99 ~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~ 178 (213)
.|||+|++|+++|++++|+|.|+|.+|+|+|.++..|+.+|+....++++.+++.+.+.|++++|++.+++.+.+++++|
T Consensus 95 ~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~ 174 (208)
T 2cby_A 95 MAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRW 174 (208)
T ss_dssp EEETHHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCE
T ss_pred EeHHHHHHHHhCCCcCCEEEcCCcEEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCcE
Confidence 99999999999999888999999999999999888899999999999999999999999999999999999999999999
Q ss_pred eCHHHHHHcCCceEecCCcc
Q 028125 179 FGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 179 ~sa~EA~~~GLiD~I~~~~~ 198 (213)
||++||+++||||+|++..+
T Consensus 175 ~ta~eA~e~GLvD~i~~~~~ 194 (208)
T 2cby_A 175 FTAAEALEYGFVDHIITRAH 194 (208)
T ss_dssp EEHHHHHHHTSCSEECSCC-
T ss_pred EcHHHHHHcCCCcEecCchH
Confidence 99999999999999998754
No 9
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=99.97 E-value=6.6e-31 Score=219.66 Aligned_cols=160 Identities=18% Similarity=0.211 Sum_probs=139.7
Q ss_pred CcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEE---ccccchHHHHH
Q 028125 31 ERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHC---VGFAYHLAGFL 107 (213)
Q Consensus 31 ~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~---~G~aaSaa~~I 107 (213)
..+|+|+|.|++.+++.+.++|..++. ++.+.|+|+||||||+++++..||+.|+.+++||+++| .|.|+|+|++|
T Consensus 10 V~vI~i~g~I~~~~~~~l~~~l~~a~~-~~~~~Ivl~inspGG~v~~~~~i~~~i~~~~~PVia~v~p~~G~AasaG~~i 88 (230)
T 3viv_A 10 VYVAQIKGQITSYTYDQFDRYITIAEQ-DNAEAIIIELDTPGGRADAMMNIVQRIQQSKIPVIIYVYPPGASAASAGTYI 88 (230)
T ss_dssp EEEEEEESCBCHHHHHHHHHHHHHHHH-TTCSEEEEEEEBSCEEHHHHHHHHHHHHTCSSCEEEEECSTTCEEETHHHHH
T ss_pred EEEEEEeCEECHHHHHHHHHHHHHHhc-CCCCEEEEEEeCCCcCHHHHHHHHHHHHhCCCCEEEEEecCCCEEhHHHHHH
Confidence 457899999999999999999998875 45899999999999999999999999999999999999 99999999999
Q ss_pred HhcCCCCcEeeccCCeEEEeCCCc--cCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHHH
Q 028125 108 LAGGEKGNRSAMPLSRIALDSPAG--AARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 185 (213)
Q Consensus 108 ~~ag~~~~r~~~p~s~i~iH~p~~--~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~ 185 (213)
+++||+ |+|.|+|+|++|+|.. +..|+..++ ..+.++.++ .+.+.|++++|++.+++++++++++|||++||+
T Consensus 89 a~a~d~--~~a~p~a~ig~~~p~~~~~~~G~~~~~--~~k~~~~~~-~~~~~la~~~Gr~~~~a~~~~~~~~~ltA~EAl 163 (230)
T 3viv_A 89 ALGSHL--IAMAPGTSIGACRPILGYSQNGSIIEA--PPAITNYFI-AYIKSLAQESGRNATIAEEFITKDLSLTPEEAL 163 (230)
T ss_dssp HHTSSE--EEECTTCEEECCCEEEEECTTSCEEEC--CHHHHHHHH-HHHHHHHHHTTCCHHHHHHHHHTCCEECHHHHH
T ss_pred HHhcCc--eeECCCCEEEeccceecCCCCCCchHH--HHHHHHHHH-HHHHHHHHHhCcCHHHHHHHHhcCCeecHHHHH
Confidence 999998 9999999999999984 345653221 123334443 345789999999999999999999999999999
Q ss_pred HcCCceEecCC
Q 028125 186 EYGLIDRIIRP 196 (213)
Q Consensus 186 ~~GLiD~I~~~ 196 (213)
++||||+|.++
T Consensus 164 e~GliD~V~~~ 174 (230)
T 3viv_A 164 KYGVIEVVARD 174 (230)
T ss_dssp HTTSCSEECSS
T ss_pred HcCCceEecCC
Confidence 99999999875
No 10
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=99.91 E-value=2.9e-23 Score=174.37 Aligned_cols=167 Identities=14% Similarity=0.155 Sum_probs=139.8
Q ss_pred cEEEEccccCcc------------hHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHh----cCCCeEEE
Q 028125 32 RVIFIGQNIDEE------------FSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQS----LKSPVGTH 95 (213)
Q Consensus 32 ~iI~i~G~I~~~------------~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~----~~~~v~t~ 95 (213)
.+|.+.|+|.+. ..+.+.+.|..+..+++.+.|+|.+|||||++..+..|+++|+. +++||++.
T Consensus 6 avi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~s~Gg~~~~~~~i~~~l~~~~~~~~kPVia~ 85 (240)
T 3rst_A 6 AVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYESAEIHKKLEEIKKETKKPIYVS 85 (240)
T ss_dssp EEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEEEECCBCHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred EEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 468889999875 34788999998888888999999999999999999999998887 57899999
Q ss_pred EccccchHHHHHHhcCCCCcEeeccCCeEEEeCCC------------------ccCCC------------ChHHHHHHHH
Q 028125 96 CVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA------------------GAARG------------QADDIRNEAD 145 (213)
Q Consensus 96 ~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~------------------~~~~G------------~~~d~~~~~~ 145 (213)
+.|.|+|+|++|+++||. |++.|++.++++.+. ....| +.++.+...+
T Consensus 86 v~g~a~~gG~~lA~a~D~--i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~k~~~~p~~~~s~~~~~~~~~ 163 (240)
T 3rst_A 86 MGSMAASGGYYISTAADK--IFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHADIMSPSREMTKEEKNIMQS 163 (240)
T ss_dssp EEEEEETHHHHHHTTSSE--EEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTTTTTTCTTSCCCHHHHHHHHH
T ss_pred ECCeehHhHHHHHHhCCe--eEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEeccccccccCCCCCCCHHHHHHHHH
Confidence 999999999999999999 999999999877331 10111 1233444567
Q ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccccc
Q 028125 146 ELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 201 (213)
Q Consensus 146 ~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~~ 201 (213)
.++.+.+.|.+.+++.++++.+.+.++++ ++.|+++||+++||||+|+..+++.+
T Consensus 164 ~l~~~~~~f~~~Va~~R~l~~~~~~~~~~-g~~~~a~~A~~~GLVD~i~~~~~~~~ 218 (240)
T 3rst_A 164 MVDNSYEGFVDVISKGRGMPKAEVKKIAD-GRVYDGRQAKKLNLVDELGFYDDTIT 218 (240)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHHHHCS-SCEEEHHHHHHTTSSSEECCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHhc-CCcccHHHHHHcCCCcccCCHHHHHH
Confidence 78888999999999999999999999776 46779999999999999998776543
No 11
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.91 E-value=3.8e-24 Score=200.38 Aligned_cols=156 Identities=15% Similarity=0.095 Sum_probs=133.7
Q ss_pred cchHHHHHHHHHhhccCCCCCceEEEEeCCC-CChhHHHHHHHHHHhcC---CCeEEEEccccchHHHHHHhcCCCCcEe
Q 028125 42 EEFSNQILATMLYLDSVDDSKRVYMYINGPG-GDVTPTLAIYDTMQSLK---SPVGTHCVGFAYHLAGFLLAGGEKGNRS 117 (213)
Q Consensus 42 ~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG-G~v~~~~~I~~~i~~~~---~~v~t~~~G~aaSaa~~I~~ag~~~~r~ 117 (213)
+.+++.++++|..+..+++.+.|+|+||||| |++.++.+||++|+.++ +||++++. .|+|++|||+++|++ ++
T Consensus 69 ~~~~~~i~~~L~~a~~d~~ik~I~L~inspGgG~v~~~~~I~~~i~~~k~~gkpvva~~~-~aas~~y~lAsaad~--i~ 145 (593)
T 3bf0_A 69 ENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGE-NYSQGQYYLASFANK--IW 145 (593)
T ss_dssp EEEHHHHHHHHHHHHHCTTCCCEEEECTEEEECCHHHHHHHHHHHHHHHHTTCCEEEEES-CEEHHHHHHHTTSSE--EE
T ss_pred ccCHHHHHHHHHHHHhCCCceEEEEEeCCCCCCcHHHHHHHHHHHHHHHhcCCeEEEEEc-cchhHHHHHHHhCCE--EE
Confidence 4567889999999888888999999999999 99999999999999984 89999875 589999999999998 99
Q ss_pred eccCCeEEEeCCCcc------------------CCCChH--------------HHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 028125 118 AMPLSRIALDSPAGA------------------ARGQAD--------------DIRNEADELLRVRDYIFKELSRKTGQP 165 (213)
Q Consensus 118 ~~p~s~i~iH~p~~~------------------~~G~~~--------------d~~~~~~~l~~~~~~~~~~~a~~tg~~ 165 (213)
+.|++.+|+|+|... ..|+.+ +.+...+.++.+.+.|.+.++++||++
T Consensus 146 ~~P~~~vg~~g~~~~~~~~~~~l~klGi~~~~~~~G~~K~a~ep~~r~~ms~~~re~~~~~l~~~~~~~~~~va~~Rg~~ 225 (593)
T 3bf0_A 146 LSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIP 225 (593)
T ss_dssp ECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred ECCCceEEEecccccccCHHHHHHHcCCeEEEEEeecccCCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999742 123322 223344677888889999999999999
Q ss_pred HHHHHHHhcC-------CceeCHHHHHHcCCceEecCCcccc
Q 028125 166 FEKITKDLSR-------IKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 166 ~~~i~~~~~~-------~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
.+++.+++++ ++||+++||+++||||+|+..+++.
T Consensus 226 ~e~l~~~~d~~~~~l~~~~~~ta~~A~~~GLvD~i~~~~e~~ 267 (593)
T 3bf0_A 226 AEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIE 267 (593)
T ss_dssp HHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCHHHHH
T ss_pred HHHHHHHHhhhhhhhhhcCCccHHHHHHCCCCCCCCCHHHHH
Confidence 9999998886 8999999999999999999776654
No 12
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.86 E-value=1.5e-21 Score=182.91 Aligned_cols=167 Identities=16% Similarity=0.063 Sum_probs=136.1
Q ss_pred CcEEEEccccCcch-------HHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHh---cCCCeEEEEcccc
Q 028125 31 ERVIFIGQNIDEEF-------SNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQS---LKSPVGTHCVGFA 100 (213)
Q Consensus 31 ~~iI~i~G~I~~~~-------~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~---~~~~v~t~~~G~a 100 (213)
..+|+++|+|.... .+.+.+.|..++.+++.+.|+|++|||||++.++..|++.|+. +++||++.+.|.|
T Consensus 303 VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~spGG~~~~~~~i~~~i~~l~~~~kPVia~v~g~A 382 (593)
T 3bf0_A 303 IGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMA 382 (593)
T ss_dssp EEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred EEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCEEEEECCCh
Confidence 35689999986543 6889999999888878899999999999999999888887766 5689999999999
Q ss_pred chHHHHHHhcCCCCcEeeccCCeEEEeCCC------------cc------CC-----------CChHHHHHHHHHHHHHH
Q 028125 101 YHLAGFLLAGGEKGNRSAMPLSRIALDSPA------------GA------AR-----------GQADDIRNEADELLRVR 151 (213)
Q Consensus 101 aSaa~~I~~ag~~~~r~~~p~s~i~iH~p~------------~~------~~-----------G~~~d~~~~~~~l~~~~ 151 (213)
+|+|++|+++||+ |+|.|+|.++...+. .+ .. ++.++.....+.++...
T Consensus 383 asgG~~iA~aaD~--iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~~~~t~~~~~~l~~~l~~~~ 460 (593)
T 3bf0_A 383 ASGGYWISTPANY--IVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQLSIENGY 460 (593)
T ss_dssp ETHHHHTTTTCSE--EEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTTSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCE--EEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999998 999999998754321 00 11 22334444456677777
Q ss_pred HHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 152 DYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 152 ~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
..|.+.+++.+|++.+.++.+++ ++.|+++||+++||||+|+..+++.
T Consensus 461 ~~f~~~V~~~Rg~~~~a~~~l~~-G~~~ta~eA~~~GLVD~v~~~~~~~ 508 (593)
T 3bf0_A 461 KRFITLVADARHSTPEQIDKIAQ-GHVWTGQDAKANGLVDSLGDFDDAV 508 (593)
T ss_dssp HHHHHHHHHHTTCCHHHHHTTCT-TCEEEHHHHHHHTSCSEECCHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHhc-CCCcCHHHHHHCCCCcCccCHHHHH
Confidence 88999999999999998887776 5678999999999999999766544
No 13
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=99.20 E-value=2.4e-10 Score=96.25 Aligned_cols=149 Identities=15% Similarity=0.100 Sum_probs=106.8
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH--------------HHHHHHHHHhc
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP--------------TLAIYDTMQSL 88 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~--------------~~~I~~~i~~~ 88 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++.. ...++..|..+
T Consensus 14 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (257)
T 2ej5_A 14 AWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGDVLRSRYAPMMKALHHL 93 (257)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CHHHHHHHTHHHHHHHHHHC
T ss_pred EEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccchhHHHHHHHHHHHHHHHhC
Confidence 55777765 667778888999988888777888888876 66887632 23456778889
Q ss_pred CCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Q 028125 89 KSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEK 168 (213)
Q Consensus 89 ~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~ 168 (213)
++||++.+.|.|.++|.-++++||. |++.+++.|.+.....+..-..-- ...+ .+..| ...
T Consensus 94 ~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~l--------~~~vG--~~~ 154 (257)
T 2ej5_A 94 EKPVVAAVNGAAAGAGMSLALACDF--RLLSEKASFAPAFIHVGLVPDAGH-------LYYL--------PRLVG--RAK 154 (257)
T ss_dssp CSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCCTTH-------HHHH--------HHHHC--HHH
T ss_pred CCCEEEEECccccchhHHHHHhCCE--EEEcCCCEEeCcccccCCCCcchH-------HHHH--------HHHhC--HHH
Confidence 9999999999999999999999998 999999999876554432111000 0011 11112 233
Q ss_pred HHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 169 ITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 169 i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
..+++-.++.++++||+++||||+|...++.
T Consensus 155 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 185 (257)
T 2ej5_A 155 ALELAVLGEKVTAEEAAALGLATKVIPLSDW 185 (257)
T ss_dssp HHHHHHHCCCEEHHHHHHHTCCSEEECGGGH
T ss_pred HHHHHHhCCccCHHHHHHcCCcceecChhHH
Confidence 4444444678999999999999999876553
No 14
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=99.20 E-value=3.2e-10 Score=95.55 Aligned_cols=146 Identities=17% Similarity=0.253 Sum_probs=108.7
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhHH-------H------HHHHHHHhcC
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTPT-------L------AIYDTMQSLK 89 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~~-------~------~I~~~i~~~~ 89 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++..- . .++..|..++
T Consensus 16 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~ 95 (258)
T 2pbp_A 16 GIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLNQFADWDRLSIVK 95 (258)
T ss_dssp EEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHHHHHHHCTTHHHHHHHTCC
T ss_pred EEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccchhHHHHHHHHHHHHHHhCC
Confidence 45777655 677778889999988888777888888876 889988531 1 4567888999
Q ss_pred CCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCC---CChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 90 SPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR---GQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 90 ~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~---G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
+||++.+.|.|.++|.-++++||. |++.+++.|.+.....+.. |... .+ .+..| .
T Consensus 96 kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~----------~l--------~~~vG--~ 153 (258)
T 2pbp_A 96 TPMIAAVNGLALGGGFELALSCDL--IVASSAAEFGFPEVNLGVMPGAGGTQ----------RL--------TKLIG--P 153 (258)
T ss_dssp SCEEEEECSEEETHHHHHHHTSSE--EEEETTCEEECGGGGGTCCCCSSHHH----------HH--------HHHHC--H
T ss_pred CCEEEEEcCEEEhHHHHHHHhCCE--EEEcCCCEEECcccccCCCCcccHHH----------HH--------HHHhC--H
Confidence 999999999999999999999998 9999999998766554321 1111 11 11112 2
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
....+++-.++.++++||+++||||+|...++.
T Consensus 154 ~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 186 (258)
T 2pbp_A 154 KRALEWLWTGARMSAKEAEQLGIVNRVVSPELL 186 (258)
T ss_dssp HHHHHHHHHCCCEEHHHHHHTTSCSEEECGGGH
T ss_pred HHHHHHHHcCCccCHHHHHHcCCcceeeChHHH
Confidence 334444444677899999999999999876553
No 15
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=99.16 E-value=4.3e-10 Score=94.45 Aligned_cols=148 Identities=16% Similarity=0.155 Sum_probs=107.3
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH------------------HHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP------------------TLAIYDT 84 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~------------------~~~I~~~ 84 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++.. ...+++.
T Consensus 10 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (253)
T 1uiy_A 10 AVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSLMRLFHR 89 (253)
T ss_dssp EEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHHHHHHHHHHHHHH
Confidence 45677654 666778888899988888777888888876 78888732 1234567
Q ss_pred HHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 028125 85 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQ 164 (213)
Q Consensus 85 i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~ 164 (213)
|..+++||++.+.|.|.++|.-++++||. |++.+++.|.+.....+.. .+.. . . .+.+. .
T Consensus 90 i~~~~kPvIAav~G~a~GgG~~lal~cD~--~ia~~~a~f~~pe~~~Gl~---p~~g-~----~--------~l~r~--v 149 (253)
T 1uiy_A 90 VYTYPKPTVAAVNGPAVAGGAGLALACDL--VVMDEEARLGYTEVKIGFV---AALV-S----V--------ILVRA--V 149 (253)
T ss_dssp HHHCSSCEEEEECSCEETHHHHHHHTSSE--EEEETTCEEECCHHHHTCC---CHHH-H----H--------HHHHH--S
T ss_pred HHhCCCCEEEEECCeeeHHHHHHHHhCCE--EEEcCCcEEeCcccccCcC---CchH-H----H--------HHHHH--h
Confidence 78889999999999999999999999998 9999999987644333221 1111 0 0 11222 2
Q ss_pred CHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 165 PFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 165 ~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
......+++-.++.++++||+++||||+|...++.
T Consensus 150 G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l 184 (253)
T 1uiy_A 150 GEKAAKDLLLTGRLVEAREAKALGLVNRIAPPGKA 184 (253)
T ss_dssp CHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTCH
T ss_pred CHHHHHHHHHhCCccCHHHHHHCCCcceecChhHH
Confidence 33455555545688999999999999999877653
No 16
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=99.16 E-value=3.8e-10 Score=95.23 Aligned_cols=149 Identities=14% Similarity=0.133 Sum_probs=106.2
Q ss_pred cEEEEccc----cCcchHHHHHHHHHhhccCCCCCceEEEEe-----CCCCChhH---------------HHHHHHHHHh
Q 028125 32 RVIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYMYIN-----GPGGDVTP---------------TLAIYDTMQS 87 (213)
Q Consensus 32 ~iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN-----SpGG~v~~---------------~~~I~~~i~~ 87 (213)
.+|+|+.+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++.. ...+++.|..
T Consensus 16 ~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 95 (260)
T 1sg4_A 16 AVMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQ 95 (260)
T ss_dssp EEEEECCTTTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccCHHHHHHHHHHHHHHHHHHHc
Confidence 45777765 666777888888888887777888888876 56777642 2345677888
Q ss_pred cCCCeEEEEccccchHHHHHHhcCCCCcEeec--cCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 028125 88 LKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM--PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQP 165 (213)
Q Consensus 88 ~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~--p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~ 165 (213)
+++||++.+.|.|.++|..++++||. |++. +++.|.+.....+..-..-- ...+ .+..|
T Consensus 96 ~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~~~a~f~~pe~~~Gl~p~~g~-------~~~l--------~~~vG-- 156 (260)
T 1sg4_A 96 SNLVLVSAINGACPAGGCLVALTCDY--RILADNPRYCIGLNETQLGIIAPFWL-------KDTL--------ENTIG-- 156 (260)
T ss_dssp CSSEEEEEECEEBCHHHHHHHTTSSE--EEEECCTTCCBSCCGGGGTCCCCHHH-------HHHH--------HHHHC--
T ss_pred CCCCEEEEECCeeehHHHHHHHhCCE--EEEecCCCCEEeCchhhhCCCCchhH-------HHHH--------HHHhC--
Confidence 99999999999999999999999998 9999 89998765544332211100 0111 11122
Q ss_pred HHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 166 FEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 166 ~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
.....+++-.++.++++||+++||||+|...++.
T Consensus 157 ~~~a~~llltg~~~~a~eA~~~GLv~~vv~~~~l 190 (260)
T 1sg4_A 157 HRAAERALQLGLLFPPAEALQVGIVDQVVPEEQV 190 (260)
T ss_dssp HHHHHHHHHHTCCBCHHHHHHHTSSSEEECGGGH
T ss_pred HHHHHHHHHcCCcCCHHHHHHcCCCCEecCHHHH
Confidence 2334445444677999999999999999876543
No 17
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=99.14 E-value=2.1e-10 Score=97.01 Aligned_cols=145 Identities=17% Similarity=0.153 Sum_probs=107.5
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe-----CCCCChhHHH-------------------HHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN-----GPGGDVTPTL-------------------AIY 82 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN-----SpGG~v~~~~-------------------~I~ 82 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++.... .++
T Consensus 15 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (263)
T 3lke_A 15 LYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVRLREVLHVLNHCV 94 (263)
T ss_dssp EEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSSSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCCHHHHHHHHHHHHHHH
Confidence 55777776 677788889999998888777888888877 8888875432 356
Q ss_pred HHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCC---CChHHHHHHHHHHHHHHHHHHHHHH
Q 028125 83 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR---GQADDIRNEADELLRVRDYIFKELS 159 (213)
Q Consensus 83 ~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~---G~~~d~~~~~~~l~~~~~~~~~~~a 159 (213)
..|..+++||++.+.|.|..+|.-++++||. |++.++++|.+.....+.. |... .+.+
T Consensus 95 ~~l~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~----------~L~~------- 155 (263)
T 3lke_A 95 LEIFTSPKVTVALINGYAYGGGFNMMLACDR--RIALRRAKFLENFHKMGISPDLGASY----------FLPR------- 155 (263)
T ss_dssp HHHHTCSSEEEEEECSEEETHHHHGGGGSSE--EEEETTCEEECCHHHHTCCCCTTHHH----------HHHH-------
T ss_pred HHHHhCCCCEEEEECCEeeHHHHHHHHHCCE--EEEcCCCEEeCchHhhCCCCCccHHH----------HHHH-------
Confidence 7788899999999999999999999999998 9999999987654433321 1111 1111
Q ss_pred HHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecC-Ccc
Q 028125 160 RKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR-PPR 198 (213)
Q Consensus 160 ~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~-~~~ 198 (213)
.. ......+++-.++.++++||+++||||+|.. .++
T Consensus 156 -~v--G~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~ 192 (263)
T 3lke_A 156 -II--GYEQTMNLLLEGKLFTSEEALRLGLIQEICENKQE 192 (263)
T ss_dssp -HH--CHHHHHHHHHHCCCEEHHHHHHHTSSSEEESSHHH
T ss_pred -Hh--CHHHHHHHHHhCCCcCHHHHHHcCCCcEecCChhH
Confidence 11 2344445554467899999999999999997 443
No 18
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=99.13 E-value=5.1e-10 Score=93.82 Aligned_cols=147 Identities=12% Similarity=0.260 Sum_probs=104.7
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEE-e----CCCCChhH----------------HHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYI-N----GPGGDVTP----------------TLAIYDTM 85 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~I-N----SpGG~v~~----------------~~~I~~~i 85 (213)
.+|+|+-+ ++.++.+.+.+.+..++.+++.+.|+|.= + |.|+++.. ...++..|
T Consensus 11 ~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i 90 (250)
T 2a7k_A 11 RVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQAV 90 (250)
T ss_dssp EEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHHHHHHHHHHHHHH
Confidence 45677655 66777888999998888777778777766 3 45677632 12456778
Q ss_pred HhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 028125 86 QSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQP 165 (213)
Q Consensus 86 ~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~ 165 (213)
..+++||++.+.|.|.++|.-++++||. |++.+++.|.+.....+.. .+... . .+ .+..|
T Consensus 91 ~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~---p~~g~----~-~l--------~~~vG-- 150 (250)
T 2a7k_A 91 LNVNKPTIAAVDGYAIGMGFQFALMFDQ--RLMASTANFVMPELKHGIG---CSVGA----A-IL--------GFTHG-- 150 (250)
T ss_dssp HTCCSCEEEEECSEEETHHHHHHTTSSE--EEEETTCEEECCGGGGTCC---CHHHH----H-HH--------HHHHC--
T ss_pred HcCCCCEEEEECCeEeHHHHHHHHhCCE--EEEcCCCEEeCcccccCCC---CCcHH----H-HH--------HHHhH--
Confidence 8899999999999999999999999998 9999999998755443321 11111 0 11 11122
Q ss_pred HHHHHHHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 166 FEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 166 ~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
.....+++-.+..|+++||+++||||+|...++
T Consensus 151 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~ 183 (250)
T 2a7k_A 151 FSTMQEIIYQCQSLDAPRCVDYRLVNQVVESSA 183 (250)
T ss_dssp HHHHHHHHHHCCCBCHHHHHHHTCCSEEECHHH
T ss_pred HHHHHHHHHcCCcccHHHHHHcCCcceecCHHH
Confidence 234444444467799999999999999987654
No 19
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=99.13 E-value=9.5e-10 Score=93.45 Aligned_cols=147 Identities=14% Similarity=0.182 Sum_probs=108.7
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCC-----CCChhH----------------HHHHHHH
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGP-----GGDVTP----------------TLAIYDT 84 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSp-----GG~v~~----------------~~~I~~~ 84 (213)
..+|+|+.+ ++.++...+.+.+..++.+++.+.|+|.=+.+ |+++.. ...+++.
T Consensus 23 va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (273)
T 2uzf_A 23 IAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRL 102 (273)
T ss_dssp EEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC--------CCSSSCCCTHHHHHHH
T ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhccccchhhhHHHhhHHHHHHH
Confidence 355777765 66777888999998888877788888887655 777632 2356778
Q ss_pred HHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 028125 85 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRK 161 (213)
Q Consensus 85 i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~ 161 (213)
|..+++||++.+.|.|.++|.-++++||. |++.+++.|.+.....+. .|...- + .+.
T Consensus 103 l~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~----------l--------~~~ 162 (273)
T 2uzf_A 103 IRIIPKPVIAMVKGYAVGGGNVLNVVCDL--TIAADNAIFGQTGPKVGSFDAGYGSGY----------L--------ARI 162 (273)
T ss_dssp HHHSSSCEEEEECEEEETHHHHHHHHSSE--EEEETTCEEECCGGGTTCCCCSTTTHH----------H--------HHH
T ss_pred HHhCCCCEEEEECCEEeehhHHHHHhCCE--EEEcCCCEEECchhhhCCCCchhHHHH----------H--------HHH
Confidence 88999999999999999999999999998 999999999876554432 222111 1 111
Q ss_pred hCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 162 TGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 162 tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
. ......+++-.++.++++||+++||||+|...++.
T Consensus 163 v--G~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 198 (273)
T 2uzf_A 163 V--GHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKV 198 (273)
T ss_dssp H--CHHHHHHHHHTCCCEEHHHHHHHTSSSEEECGGGS
T ss_pred h--CHHHHHHHHHhCCCCCHHHHHHcCCCccccCHHHH
Confidence 1 22344455555788999999999999999876553
No 20
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=99.11 E-value=1.4e-09 Score=92.38 Aligned_cols=149 Identities=17% Similarity=0.181 Sum_probs=107.3
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCC-----CCChhH---------------HHHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGP-----GGDVTP---------------TLAIYDTMQ 86 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSp-----GG~v~~---------------~~~I~~~i~ 86 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+.| |+++.. ...+++.|.
T Consensus 23 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (272)
T 1hzd_A 23 VVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIA 102 (272)
T ss_dssp EEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 55777644 67778889999999888877788888876554 777643 234567788
Q ss_pred hcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 87 SLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 87 ~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
.+++||++.+.|.|.++|.-++++||. |++.+++.|.+.....+..-..-- ...+ .+..| .
T Consensus 103 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~l--------~r~vG--~ 163 (272)
T 1hzd_A 103 NLPVPTIAAIDGLALGGGLELALACDI--RVAASSAKMGLVETKLAIIPGGGG-------TQRL--------PRAIG--M 163 (272)
T ss_dssp TCSSCEEEEESEEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCCSSH-------HHHH--------HHHHC--H
T ss_pred hCCCCEEEEeCceEEecHHHHHHhCCE--EEEcCCCEEeCchhccCCCCCchH-------HHHH--------HHHhC--H
Confidence 899999999999999999999999998 999999999876655442111000 0011 11122 2
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
....+++-.+..++++||+++||||+|...++.
T Consensus 164 ~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 196 (272)
T 1hzd_A 164 SLAKELIFSARVLDGKEAKAVGLISHVLEQNQE 196 (272)
T ss_dssp HHHHHHHHHTCEEEHHHHHHHTSCSEEECCCTT
T ss_pred HHHHHHHHcCCcCCHHHHHHCCCcceecChhhh
Confidence 334444444678999999999999999987653
No 21
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=99.11 E-value=1.3e-09 Score=92.14 Aligned_cols=149 Identities=18% Similarity=0.120 Sum_probs=105.5
Q ss_pred cEEEEccc----cCcchHHHHHHHHHhhccCCCCCceEEEE-e----CCCCChhH--------------H-HHHHHHHHh
Q 028125 32 RVIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYMYI-N----GPGGDVTP--------------T-LAIYDTMQS 87 (213)
Q Consensus 32 ~iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l~I-N----SpGG~v~~--------------~-~~I~~~i~~ 87 (213)
.+|+|+.+ ++.++...+.+.+..++.+++.+.|+|.= + |.|+++.. . ..+++.|..
T Consensus 20 ~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 99 (265)
T 2ppy_A 20 AEIHLHINKSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSADPRFKTQFCLFCNETLDKIAR 99 (265)
T ss_dssp EEEEECSSTTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhccchhHHHHHHHHHHHHHHHHHc
Confidence 45777765 55567788888888888777778888876 3 44787742 1 456778888
Q ss_pred cCCCeEEEEccccchHHHHHHhcCCCCcEeeccCC-eEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 88 LKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLS-RIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 88 ~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s-~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
+++||++.+.|.|.++|.-++++||. |++.+++ .|.+.....+..-..-- ...+ .+..| .
T Consensus 100 ~~kPvIAav~G~a~GgG~~lalacD~--ria~~~ag~f~~pe~~~Gl~p~~g~-------~~~l--------~~~vG--~ 160 (265)
T 2ppy_A 100 SPQVYIACLEGHTVGGGLEMALACDL--RFMGDEAGKIGLPEVSLGVLAGTGG-------TQRL--------ARLIG--Y 160 (265)
T ss_dssp SSSEEEEEECSEEETHHHHHHHTSSE--EEEETTCCCEECCGGGGTCCCTTTH-------HHHH--------HHHHC--H
T ss_pred CCCCEEEEECCEEeeHHHHHHHhCCE--EEEeCCCCEEECcccccCCCCCchH-------HHHH--------HHHhC--H
Confidence 99999999999999999999999998 9999999 98875554432111000 0011 11122 2
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
....+++-.++.++++||+++||||+|...++.
T Consensus 161 ~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 193 (265)
T 2ppy_A 161 SRALDMNITGETITPQEALEIGLVNRVFPQAET 193 (265)
T ss_dssp HHHHHHHHHCCCBCHHHHHHHTSSSEEECGGGH
T ss_pred HHHHHHHHhCCccCHHHHHHCCCcceecCHHHH
Confidence 334444444677999999999999999876553
No 22
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=99.06 E-value=2.2e-09 Score=90.30 Aligned_cols=150 Identities=13% Similarity=0.153 Sum_probs=105.5
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEE----EeCCCCChhHH----------------HHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMY----INGPGGDVTPT----------------LAIYDTMQ 86 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~----INSpGG~v~~~----------------~~I~~~i~ 86 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|. .=|.|+++..- ..++..|.
T Consensus 17 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~ 96 (256)
T 3qmj_A 17 RTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSEGKFGFRGLIKALA 96 (256)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCCCSSHHHHHHHHHH
T ss_pred EEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHHHHHHHHHHHHHHH
Confidence 45667654 6667788888888888887777877773 45667776432 35678889
Q ss_pred hcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 87 SLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 87 ~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
.+++||++.+.|.|..+|.-++++||- |++.+++.|.+.....+..-..-- ...+.+.+ ..
T Consensus 97 ~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~-------~~~l~r~v----------G~ 157 (256)
T 3qmj_A 97 GFPKPLICAVNGLGVGIGATILGYADL--AFMSSTARLKCPFTSLGVAPEAAS-------SYLLPQLV----------GR 157 (256)
T ss_dssp HCCSCEEEEECSEEETHHHHGGGGCSE--EEEETTCEEECCGGGC---CCTTH-------HHHHHHHH----------HH
T ss_pred hCCCCEEEEECCeehhHHHHHHHhCCE--EEEeCCCEEECcccccCCCCCccH-------HHHHHHHh----------CH
Confidence 999999999999999999999999998 999999999876554432111000 00111111 12
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
....+++-.+..++++||+++||||+|...++..
T Consensus 158 ~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~ 191 (256)
T 3qmj_A 158 QNAAWLLMSSEWIDAEEALRMGLVWRICSPEELL 191 (256)
T ss_dssp HHHHHHHHSCCCEEHHHHHHHTSSSEEECGGGHH
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCccEEeCHhHHH
Confidence 2334455456789999999999999999776543
No 23
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=99.06 E-value=1.8e-09 Score=92.53 Aligned_cols=148 Identities=18% Similarity=0.160 Sum_probs=106.3
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH----------------HHHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP----------------TLAIYDTMQ 86 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~----------------~~~I~~~i~ 86 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++.. ...+++.|.
T Consensus 44 ~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (287)
T 2vx2_A 44 RNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEVFQTCSKVMMHIR 123 (287)
T ss_dssp EEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchhHHHHHHHHHHHHHHHHH
Confidence 45667654 666778888888888877777787877655 56777531 234567788
Q ss_pred hcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 87 SLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 87 ~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
.+++||++.+.|.|..+|.-++++||. |++.++++|.+.....+.. .+.... . +.+. +..
T Consensus 124 ~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~lGl~---p~~g~~------------~-L~r~--vG~ 183 (287)
T 2vx2_A 124 NHPVPVIAMVNGLATAAGCQLVASCDI--AVASDKSSFATPGVNVGLF---CSTPGV------------A-LARA--VPR 183 (287)
T ss_dssp TCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCC---CHHHHH------------H-HHTT--SCH
T ss_pred hCCCCEEEEECCEEEcHHHHHHHhCCE--EEEcCCCEEECchhhhCCC---CchHHH------------H-HHHH--hhH
Confidence 899999999999999999999999998 9999999998765544322 111110 0 1222 233
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
....+++-.++.|+++||+++||||+|...++.
T Consensus 184 ~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l 216 (287)
T 2vx2_A 184 KVALEMLFTGEPISAQEALLHGLLSKVVPEAEL 216 (287)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGH
T ss_pred HHHHHHHHhCCCCCHHHHHHCCCcceecCHHHH
Confidence 445555545678999999999999999876553
No 24
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=99.06 E-value=1.2e-09 Score=91.33 Aligned_cols=146 Identities=11% Similarity=0.027 Sum_probs=105.8
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhHHH----------HHHHHHHhcCCCe
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTPTL----------AIYDTMQSLKSPV 92 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~~~----------~I~~~i~~~~~~v 92 (213)
.+|+|+.+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++..-. .++..|..+++||
T Consensus 14 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~~kPv 93 (243)
T 2q35_A 14 VQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGEVEVLDLSGLILDCEIPI 93 (243)
T ss_dssp EEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTCCCCCCCHHHHHTCCSCE
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccchhhHHHHHHHHHHhCCCCE
Confidence 55777764 667778888898888887777888888754 7788886532 3467888999999
Q ss_pred EEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Q 028125 93 GTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKI 169 (213)
Q Consensus 93 ~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i 169 (213)
++.+.|.|..+|.-++++||. |++.+++.|.+.....+. .|.. ..+ .+..| ....
T Consensus 94 IAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~----------~~l--------~~~vG--~~~a 151 (243)
T 2q35_A 94 IAAMQGHSFGGGLLLGLYADF--VVFSQESVYATNFMKYGFTPVGATS----------LIL--------REKLG--SELA 151 (243)
T ss_dssp EEEECSEEETHHHHHHHTSSE--EEEESSSEEECCHHHHTSCCCSSHH----------HHH--------HHHHC--HHHH
T ss_pred EEEEcCccccchHHHHHhCCE--EEEeCCCEEECCccccCCCCcchHH----------HHH--------HHHhC--HHHH
Confidence 999999999999999999998 999999998764433221 1111 011 11112 2333
Q ss_pred HHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 170 TKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 170 ~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
.+++-.++.++++||+++||||+|...++.
T Consensus 152 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 181 (243)
T 2q35_A 152 QEMIYTGENYRGKELAERGIPFPVVSRQDV 181 (243)
T ss_dssp HHHHHHCCCEEHHHHHHTTCSSCEECHHHH
T ss_pred HHHHHcCCCCCHHHHHHcCCCCEecChhHH
Confidence 444444677999999999999999876543
No 25
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=99.05 E-value=1.5e-09 Score=91.30 Aligned_cols=150 Identities=15% Similarity=0.142 Sum_probs=104.0
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChh---------HHHHHHHHHHhcCCCe
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVT---------PTLAIYDTMQSLKSPV 92 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~---------~~~~I~~~i~~~~~~v 92 (213)
..+|+|+-+ ++.++...+.+.+..++.++..+.|+|.=+ |-|+++. ....++..|..+++||
T Consensus 16 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~l~~~~kPv 95 (255)
T 3p5m_A 16 VLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTAGAADAANRVVRAITSLPKPV 95 (255)
T ss_dssp EEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHHHHHHHHHHHHHHHHHCSSCE
T ss_pred EEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcchHHHHHHHHHHHHHHhCCCCE
Confidence 345777665 667778888898888887777777776432 2334442 2346788899999999
Q ss_pred EEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Q 028125 93 GTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKD 172 (213)
Q Consensus 93 ~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~ 172 (213)
++.+.|.|.++|.-++++||. |++.+++.|.+.....+..-..-- ...+.+ .. ......++
T Consensus 96 IAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~-------~~~l~r--------~v--G~~~A~~l 156 (255)
T 3p5m_A 96 IAGVHGAAVGFGCSLALACDL--VVAAPASYFQLAFTRVGLMPDGGA-------SALLPL--------LI--GRARTSRM 156 (255)
T ss_dssp EEEECSEEETHHHHHHHHSSE--EEECTTCEEECGGGGGTCCCCTTH-------HHHTHH--------HH--CHHHHHHH
T ss_pred EEEeCCeehhhHHHHHHHCCE--EEEcCCcEEeCcccccCcCCCccH-------HHHHHH--------Hh--CHHHHHHH
Confidence 999999999999999999998 999999998876554432111000 001111 11 22333444
Q ss_pred hcCCceeCHHHHHHcCCceEecCCccc
Q 028125 173 LSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 173 ~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
+-.++.++++||+++||||+|...++.
T Consensus 157 ~ltg~~~~a~eA~~~GLv~~vv~~~~l 183 (255)
T 3p5m_A 157 AMTAEKISAATAFEWGMISHITSADEY 183 (255)
T ss_dssp HHHCCCEEHHHHHHTTSCSEECCTTCH
T ss_pred HHcCCCcCHHHHHHCCCCCEeeCHHHH
Confidence 444677999999999999999987654
No 26
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=99.05 E-value=4.5e-09 Score=88.33 Aligned_cols=149 Identities=18% Similarity=0.206 Sum_probs=104.5
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeC----CCCChhH--------------HHHHHHHHHhc
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYING----PGGDVTP--------------TLAIYDTMQSL 88 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INS----pGG~v~~--------------~~~I~~~i~~~ 88 (213)
.+|+|+-+ ++.++...+.+.+..++.++..+.|+|.=+. -|+++.. ...++..|..+
T Consensus 11 ~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (254)
T 3gow_A 11 LVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSGL 90 (254)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHTC
T ss_pred EEEEECCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCCChHHHhhcchhHHHHHHHHHHHHHHHHhC
Confidence 45677654 5667788888888888877777777775432 2455432 34677889999
Q ss_pred CCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Q 028125 89 KSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEK 168 (213)
Q Consensus 89 ~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~ 168 (213)
++||++.+.|.|..+|.-++++||- |++.+++.|.+-....+..-..-- ...+ .+..| ...
T Consensus 91 ~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~-------~~~l--------~r~vG--~~~ 151 (254)
T 3gow_A 91 EKPLVVAVNGVAAGAGMSLALWGDL--RLAAVGASFTTAFVRIGLVPDSGL-------SFLL--------PRLVG--LAK 151 (254)
T ss_dssp SSCEEEEECSEEETHHHHHHTTCSE--EEEETTCEEECCGGGGTCCCCTTH-------HHHH--------HHHHC--HHH
T ss_pred CCCEEEEECCeeehHHHHHHHHCCE--EEEcCCCEEeCcccccCCCCCccH-------HHHH--------HHHhC--HHH
Confidence 9999999999999999999999998 999999999866554432111100 0011 11112 233
Q ss_pred HHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 169 ITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 169 i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
..+++-.+..++++||+++||||+|...++.
T Consensus 152 A~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l 182 (254)
T 3gow_A 152 AQELLLLSPRLSAEEALALGLVHRVVPAEKL 182 (254)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSCSEEECGGGH
T ss_pred HHHHHHcCCccCHHHHHHcCCCCEecCHHHH
Confidence 3444444678999999999999999987654
No 27
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=99.04 E-value=2.4e-09 Score=91.25 Aligned_cols=151 Identities=17% Similarity=0.212 Sum_probs=105.0
Q ss_pred CcEEEEccc----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH---------------HHHHHHHHHh
Q 028125 31 ERVIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP---------------TLAIYDTMQS 87 (213)
Q Consensus 31 ~~iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~---------------~~~I~~~i~~ 87 (213)
..+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++.. ...++..|..
T Consensus 34 Va~ItlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (277)
T 4di1_A 34 LATLVVSRPPTNAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNAPEADTAARVRLEAIDAVAA 113 (277)
T ss_dssp EEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccChHHHHHHHHHHHHHHHHHHh
Confidence 345777765 666778888888888887777777766432 33455432 2356778889
Q ss_pred cCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Q 028125 88 LKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFE 167 (213)
Q Consensus 88 ~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~ 167 (213)
+++||++.+.|.|.++|.-++++||- |++.++++|.+.....+..-..-- ...+.+ .. ...
T Consensus 114 ~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~lGl~p~~g~-------~~~L~r--------~v--G~~ 174 (277)
T 4di1_A 114 IPKPTVAAVTGYALGAGLTLALAADW--RVSGDNVKFGATEILAGLIPGGGG-------MGRLTR--------VV--GSS 174 (277)
T ss_dssp CSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCCTTH-------HHHHHH--------HH--CHH
T ss_pred CCCCEEEEECCeEehhHHHHHHhCCE--EEEcCCCEEECcccccCCCCCchH-------HHHHHH--------Hh--CHH
Confidence 99999999999999999999999998 999999999876554432111100 011111 11 223
Q ss_pred HHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 168 KITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 168 ~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
...+++-.++.++++||+++||||+|...++..
T Consensus 175 ~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~ 207 (277)
T 4di1_A 175 RAKELVFSGRFFDAEEALALGLIDDMVAPDDVY 207 (277)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHH
T ss_pred HHHHHHHcCCCCCHHHHHHCCCccEEeChhHHH
Confidence 344444446789999999999999999876543
No 28
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=99.04 E-value=6.7e-09 Score=88.54 Aligned_cols=148 Identities=16% Similarity=0.094 Sum_probs=102.7
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH-------------------HHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP-------------------TLAIYD 83 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~-------------------~~~I~~ 83 (213)
.+|+|+-+ ++.++...+.+.+..++.+++. .|+|.=+ |.|+++.. ...++.
T Consensus 37 a~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 2f6q_A 37 TKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVG 115 (280)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCcchhhHHHHHHHHHHHHHHH
Confidence 45667654 6667778888888888776666 5555544 66666532 123567
Q ss_pred HHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028125 84 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTG 163 (213)
Q Consensus 84 ~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg 163 (213)
.|..+++||++.+.|.|..+|.-++++||. |++.+++.|.+-....+..-..-- ...+ .+..
T Consensus 116 ~l~~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~L--------~r~v- 177 (280)
T 2f6q_A 116 CFIDFPKPLIAVVNGPAVGISVTLLGLFDA--VYASDRATFHTPFSHLGQSPEGCS-------SYTF--------PKIM- 177 (280)
T ss_dssp HHHSCCSCEEEEECSCEETHHHHGGGGCSE--EEEETTCEEECCTGGGTCCCCTTH-------HHHH--------HHHH-
T ss_pred HHHcCCCCEEEEECCeeehHHHHHHHhCCE--EEECCCcEEECchHhhCCCCcccH-------HHHH--------HHHh-
Confidence 788899999999999999999999999998 999999999876555432211000 0011 1111
Q ss_pred CCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 164 QPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 164 ~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
......+++-.++.++++||+++||||+|...++.
T Consensus 178 -G~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l 212 (280)
T 2f6q_A 178 -SPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTF 212 (280)
T ss_dssp -CHHHHHHHHTTCCCEEHHHHHHTTSCSEEECTTTH
T ss_pred -CHHHHHHHHHcCCCCCHHHHHHCCCcceEECHHHH
Confidence 23444555556788999999999999999877653
No 29
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=99.04 E-value=3.1e-09 Score=89.74 Aligned_cols=146 Identities=14% Similarity=0.167 Sum_probs=104.6
Q ss_pred cEEEEccc----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH----------------HHHHHHHHHh
Q 028125 32 RVIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP----------------TLAIYDTMQS 87 (213)
Q Consensus 32 ~iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~----------------~~~I~~~i~~ 87 (213)
.+|+|+-+ ++.++...+.+.+..++.++..+.|+|.=+ |.|+++.. ...+++.|..
T Consensus 17 ~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (261)
T 3pea_A 17 AVATLNHAPANAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATELAQLGQVTFERVEK 96 (261)
T ss_dssp EEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHHHHHHHHHHHHHHHh
Confidence 45777765 667778888888888887777787777543 45555421 1346778899
Q ss_pred cCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCC---CChHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 028125 88 LKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR---GQADDIRNEADELLRVRDYIFKELSRKTGQ 164 (213)
Q Consensus 88 ~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~---G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~ 164 (213)
+++||++.+.|.|..+|.-++++||. |++.+++.|.+.....+.. |... .+.+. .
T Consensus 97 ~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~----------~L~r~--------v-- 154 (261)
T 3pea_A 97 CSKPVIAAIHGAALGGGLEFAMSCHM--RFATESAKLGLPELTLGLIPGFAGTQ----------RLPRY--------V-- 154 (261)
T ss_dssp CSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCCSSHHH----------HHHHH--------H--
T ss_pred CCCCEEEEECCeeehHHHHHHHhCCE--EEEcCCCEEECcccccCcCCCccHHH----------HHHHH--------h--
Confidence 99999999999999999999999998 9999999988765554321 1111 11111 1
Q ss_pred CHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 165 PFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 165 ~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
......+++-.++.++++||+++||||+|...++.
T Consensus 155 G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 189 (261)
T 3pea_A 155 GKAKACEMMLTSTPITGAEALKWGLVNGVFAEETF 189 (261)
T ss_dssp CHHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGH
T ss_pred CHHHHHHHHHcCCCCCHHHHHHCCCccEecCHHHH
Confidence 23344444444677999999999999999987654
No 30
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=99.03 E-value=9.8e-09 Score=86.89 Aligned_cols=146 Identities=16% Similarity=0.179 Sum_probs=103.4
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH-----------------HHHHHHH
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP-----------------TLAIYDT 84 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~-----------------~~~I~~~ 84 (213)
..+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |-|+++.. ...++..
T Consensus 15 v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (266)
T 3fdu_A 15 VLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGPAGQVPPFVLLKS 94 (266)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCCCSCGGGSHHHHHHHH
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccchhhHHHHHHHHHHHH
Confidence 355777765 667778888899988888777787777532 34455433 2356778
Q ss_pred HHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 028125 85 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQ 164 (213)
Q Consensus 85 i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~ 164 (213)
|..+++||++.+.|.|..+|.-++++||. |++.+++.|.+.....+.....-- ...+.+ ..|
T Consensus 95 l~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~l~r--------~vG- 156 (266)
T 3fdu_A 95 AARLSKPLIIAVKGVAIGIGVTILLQADL--VFADNTALFQIPFVSLGLSPEGGA-------SQLLVK--------QAG- 156 (266)
T ss_dssp HHHCCSCEEEEECSEEETHHHHGGGGCSE--EEECTTCEEECCTTTTTCCCCTTH-------HHHHHH--------HHC-
T ss_pred HHhCCCCEEEEECCEEehHHHHHHHhCCE--EEEcCCCEEECchhhhCCCCcchH-------HHHHHH--------HhC-
Confidence 89999999999999999999999999998 999999999876655442211100 001111 112
Q ss_pred CHHHHHHHhcCCceeCHHHHHHcCCceEecC
Q 028125 165 PFEKITKDLSRIKRFGSQEALEYGLIDRIIR 195 (213)
Q Consensus 165 ~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~ 195 (213)
.....+++-.+..++++||+++||||+|..
T Consensus 157 -~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~ 186 (266)
T 3fdu_A 157 -YHKAAELLFTAKKFNAETALQAGLVNEIVE 186 (266)
T ss_dssp -HHHHHHHHHHCCEECHHHHHHTTSCSEECS
T ss_pred -HHHHHHHHHhCCCcCHHHHHHCCCHHHHHH
Confidence 233344444467799999999999999986
No 31
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=99.02 E-value=8.2e-10 Score=93.17 Aligned_cols=146 Identities=14% Similarity=0.149 Sum_probs=104.7
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhHHH-------------HHHHHHHhcC
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTPTL-------------AIYDTMQSLK 89 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~~~-------------~I~~~i~~~~ 89 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++.... ..++.|..++
T Consensus 18 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~ 97 (260)
T 1mj3_A 18 GLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIK 97 (260)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHHHHHC--CCGGGGGGGCS
T ss_pred EEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccchHHHHHHHHHHHHHHHhCC
Confidence 45777655 677788889999988888777788877655 5788875411 1234566778
Q ss_pred CCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 90 SPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 90 ~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
+||++.+.|.|.++|.-++++||. |++.+++.|.+.....+. .|...- +. +..| .
T Consensus 98 kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~~-------l~-----------r~vG--~ 155 (260)
T 1mj3_A 98 KPVIAAVNGYALGGGCELAMMCDI--IYAGEKAQFGQPEILLGTIPGAGGTQR-------LT-----------RAVG--K 155 (260)
T ss_dssp SCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCCSSTTTH-------HH-----------HHHC--H
T ss_pred CCEEEEECCEEEeHHHHHHHhCCE--EEEcCCCEEeCcccccCCCCCccHHHH-------HH-----------HHhC--H
Confidence 999999999999999999999998 999999999876655432 222111 11 1112 2
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
....+++-.++.++++||+++||||+|...++.
T Consensus 156 ~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 188 (260)
T 1mj3_A 156 SLAMEMVLTGDRISAQDAKQAGLVSKIFPVETL 188 (260)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSCSEEECTTTH
T ss_pred HHHHHHHHcCCcCCHHHHHHcCCccEEeChHHH
Confidence 334444444677899999999999999877654
No 32
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=99.02 E-value=2.4e-09 Score=90.92 Aligned_cols=149 Identities=13% Similarity=0.146 Sum_probs=105.2
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhHH------------------------
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTPT------------------------ 78 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~~------------------------ 78 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++...
T Consensus 15 ~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (275)
T 1dci_A 15 LHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRDLIS 94 (275)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSSHHHHHHHHHHHHH
T ss_pred EEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccchhhhhhHHHHHHHH
Confidence 35777654 677788889999988887777787777654 667876431
Q ss_pred --HHHHHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHH
Q 028125 79 --LAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFK 156 (213)
Q Consensus 79 --~~I~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~ 156 (213)
..++..|..+++||++.+.|.|.++|.-++++||. |++.+++.|.+.....+..-..-- ..
T Consensus 95 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~-------- 157 (275)
T 1dci_A 95 RYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDI--RYCTQDAFFQVKEVDVGLAADVGT-------LQ-------- 157 (275)
T ss_dssp HHHHHHHHHHHSSSCEEEEECSEEETHHHHHHTTSSE--EEEETTCEEECCGGGGTSCCCSSH-------HH--------
T ss_pred HHHHHHHHHHhCCCCEEEEECCeeeHHHHHHHHhCCE--EEEeCCCEEeCcccccCCCCCccH-------HH--------
Confidence 12455678889999999999999999999999998 999999999876554432111000 00
Q ss_pred HHHHHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCC-cc
Q 028125 157 ELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP-PR 198 (213)
Q Consensus 157 ~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~-~~ 198 (213)
.+.+..|.+ ....+++-.+..|+++||+++||||+|... ++
T Consensus 158 ~l~r~vG~~-~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~ 199 (275)
T 1dci_A 158 RLPKVIGNR-SLVNELTFTARKMMADEALDSGLVSRVFPDKDV 199 (275)
T ss_dssp HGGGTCSCH-HHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHH
T ss_pred HHHHHhCcH-HHHHHHHHcCCCCCHHHHHHcCCcceecCChHH
Confidence 112223331 344455444678999999999999999876 44
No 33
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=99.01 E-value=4.7e-09 Score=88.75 Aligned_cols=149 Identities=17% Similarity=0.190 Sum_probs=104.1
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCC-----CCChhH---------------HHHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGP-----GGDVTP---------------TLAIYDTMQ 86 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSp-----GG~v~~---------------~~~I~~~i~ 86 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+.| |+++.. ...++..|.
T Consensus 20 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 99 (265)
T 3kqf_A 20 VKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNEEQVRHAVSMIRTTMEMVE 99 (265)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 45667655 56677888888888887777677777765442 555532 345677888
Q ss_pred hcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 87 SLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 87 ~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
.+++||++.+.|.|..+|.-++++||. |++.+++.|.+.....+..-..-- ...+.+. . ..
T Consensus 100 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~L~r~--------v--G~ 160 (265)
T 3kqf_A 100 QLPQPVIAAINGIALGGGTELSLACDF--RIAAESASLGLTETTLAIIPGAGG-------TQRLPRL--------I--GV 160 (265)
T ss_dssp TCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCCSSH-------HHHHHHH--------H--CH
T ss_pred hCCCCEEEEECCeeehHHHHHHHhCCE--EEEcCCcEEECcccccCcCCCccH-------HHHHHHH--------h--CH
Confidence 999999999999999999999999998 999999999876655442111000 0111111 1 12
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
....+++-.++.++++||+++||||+|...++.
T Consensus 161 ~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 193 (265)
T 3kqf_A 161 GRAKELIYTGRRISAQEAKEYGLVEFVVPVHLL 193 (265)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGH
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCccEEeCHHHH
Confidence 333444444677999999999999999986654
No 34
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=99.01 E-value=1.9e-09 Score=91.21 Aligned_cols=147 Identities=14% Similarity=0.172 Sum_probs=105.1
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEE----EeCCCCChhHH-------------HHHHHHHHhcC
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMY----INGPGGDVTPT-------------LAIYDTMQSLK 89 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~----INSpGG~v~~~-------------~~I~~~i~~~~ 89 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|. .=|.|+++..- ..+++.|..++
T Consensus 21 ~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~ 100 (263)
T 3moy_A 21 GLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERNLLSGWDSLTQVR 100 (263)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHHHHHTTTTHHHHHHTTCC
T ss_pred EEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCchhHHHHHHHHHHHHHHhCC
Confidence 45777665 5667778888888888877777777763 34556666432 24678899999
Q ss_pred CCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 90 SPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 90 ~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
+||++.+.|.|..+|.-++++||. |++.++++|.+.....+. .|...-+ . + .. ..
T Consensus 101 kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~l-------~---~--------~v--G~ 158 (263)
T 3moy_A 101 KPIVAAVAGYALGGGCELAMLCDL--VIAADTARFGQPEITLGILPGLGGTQRL-------T---R--------AV--GK 158 (263)
T ss_dssp SCEEEEECBEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCSSSTTTHH-------H---H--------HH--CH
T ss_pred CCEEEEECCEeehHHHHHHHHCCE--EEecCCCEEeCcccccCCCCchhHHHHH-------H---H--------Hh--CH
Confidence 999999999999999999999998 999999999876554332 2222111 1 1 11 12
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
....+++-.+..++++||+++||||+|...++..
T Consensus 159 ~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~ 192 (263)
T 3moy_A 159 AKAMDLCLTGRSLTAEEAERVGLVSRIVPAADLL 192 (263)
T ss_dssp HHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHH
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCccEecCchHHH
Confidence 3334444446789999999999999999876543
No 35
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=99.01 E-value=1.3e-09 Score=93.06 Aligned_cols=173 Identities=15% Similarity=0.178 Sum_probs=104.5
Q ss_pred eeeeecCCCCCCchhhhH-HhhccCcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEE----EeCCCCChhH
Q 028125 8 KVLYRTPGEGSWQWVDLW-NALYRERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMY----INGPGGDVTP 77 (213)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~~~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~----INSpGG~v~~ 77 (213)
|+|...+|...+....+. +.--...+|+|+-+ ++.++...+.+.+..++.++..+.|+|. .=|.|+++..
T Consensus 11 ~~~~~~~~~~~m~~~~v~~~~~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~ 90 (278)
T 3h81_A 11 TLEAQTQGPGSMTYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKE 90 (278)
T ss_dssp ------------CCSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHH
T ss_pred CCCCCCCCCCCCCCCeEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHH
Confidence 566677775553211111 11112345667644 5667788888888888777767777763 3445666533
Q ss_pred HH-------------HHHHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHH
Q 028125 78 TL-------------AIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEA 144 (213)
Q Consensus 78 ~~-------------~I~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~ 144 (213)
-. ..+..|..+++||++.+.|.|..+|.-++++||. |++.++++|.+.....+..-..--
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~lGl~p~~g~----- 163 (278)
T 3h81_A 91 MADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDV--LIAADTAKFGQPEIKLGVLPGMGG----- 163 (278)
T ss_dssp HHTCCHHHHHHHTTTGGGHHHHTCCSCEEEEECBEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCCSSH-----
T ss_pred HhccChhhHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCE--EEEcCCCEEECchhhcCcCCCccH-----
Confidence 21 1145688899999999999999999999999998 999999999876555432111000
Q ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 145 DELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 145 ~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
...+.+ ..| .....+++-.++.++++||+++||||+|...++.
T Consensus 164 --~~~L~r--------~vG--~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l 206 (278)
T 3h81_A 164 --SQRLTR--------AIG--KAKAMDLILTGRTMDAAEAERSGLVSRVVPADDL 206 (278)
T ss_dssp --HHHHHH--------HHC--HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGH
T ss_pred --HHHHHH--------HhC--HHHHHHHHHhCCCcCHHHHHHCCCccEEeChhHH
Confidence 011111 112 2334444444677999999999999999987654
No 36
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=99.01 E-value=3.5e-09 Score=89.46 Aligned_cols=149 Identities=13% Similarity=0.071 Sum_probs=104.3
Q ss_pred cEEEEccc----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChh-----H------------HHHHHHHHH
Q 028125 32 RVIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVT-----P------------TLAIYDTMQ 86 (213)
Q Consensus 32 ~iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~-----~------------~~~I~~~i~ 86 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++. . ...++..|.
T Consensus 22 ~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 101 (264)
T 1wz8_A 22 LEITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASHEALLRVFWEARDLVLGPL 101 (264)
T ss_dssp EEEEECCSGGGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCcCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccccccccccchHHHHHHHHHHHHHHHHHH
Confidence 44667655 666778888888888887777888888765 7788873 1 123456778
Q ss_pred hcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 87 SLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 87 ~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
.+++||++.+.|.|..+|.-++++||. |++.+++.|.+.....+..-..-- ...+ .+..| .
T Consensus 102 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~l--------~r~vG--~ 162 (264)
T 1wz8_A 102 NFPRPVVAAVEKVAVGAGLALALAADI--AVVGKGTRLLDGHLRLGVAAGDHA-------VLLW--------PLLVG--M 162 (264)
T ss_dssp HSSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTSCCTTTH-------HHHT--------HHHHC--H
T ss_pred cCCCCEEEEECCeeechhHHHHHhCCE--EEecCCCEEeCchhhcCcCCCccH-------HHHH--------HHHhC--H
Confidence 889999999999999999999999998 999999998865443332110000 0011 11112 2
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
....+++-.+..++++||+++||||+|...++.
T Consensus 163 ~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 195 (264)
T 1wz8_A 163 AKAKYHLLLNEPLTGEEAERLGLVALAVEDEKV 195 (264)
T ss_dssp HHHHHHHHHTCCEEHHHHHHHTSSSEEECGGGH
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCceeecChhHH
Confidence 334444444677999999999999999876553
No 37
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=99.01 E-value=4.6e-09 Score=89.41 Aligned_cols=151 Identities=17% Similarity=0.133 Sum_probs=106.2
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH-------------------HHHHH
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP-------------------TLAIY 82 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~-------------------~~~I~ 82 (213)
..+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++.. ...++
T Consensus 27 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (279)
T 3g64_A 27 VATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTARLLDFNRMTGQVV 106 (279)
T ss_dssp EEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhHHHHHHHHHHHHH
Confidence 355777765 667778889999988888777887777543 33566421 13566
Q ss_pred HHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCC-CChHHHHHHHHHHHHHHHHHHHHHHHH
Q 028125 83 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRK 161 (213)
Q Consensus 83 ~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~-G~~~d~~~~~~~l~~~~~~~~~~~a~~ 161 (213)
..|..+++||++.+.|.|..+|.-++++||. |++.+++.|.+.....+.. ...-- ...+.+.
T Consensus 107 ~~l~~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~~p~~g~-------~~~l~r~-------- 169 (279)
T 3g64_A 107 RAVRECPFPVIAALHGVAAGAGAVLALAADF--RVADPSTRFAFLFTRVGLSGGDMGA-------AYLLPRV-------- 169 (279)
T ss_dssp HHHHHSSSCEEEEECSEEETHHHHHHHHSSE--EEECTTCEEECCGGGGTCCSCCTTH-------HHHHHHH--------
T ss_pred HHHHhCCCCEEEEEcCeeccccHHHHHhCCE--EEEeCCCEEeCchhhcCCCCCchhH-------HHHHHHH--------
Confidence 7888999999999999999999999999998 9999999998765554433 11100 0111111
Q ss_pred hCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 162 TGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 162 tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
. ......+++-.+..++++||+++||||+|...++..
T Consensus 170 v--G~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~ 206 (279)
T 3g64_A 170 V--GLGHATRLLMLGDTVRAPEAERIGLISELTEEGRAD 206 (279)
T ss_dssp H--CHHHHHHHHHHCCCEEHHHHHHHTCCSEECCTTCHH
T ss_pred h--CHHHHHHHHHcCCCcCHHHHHHCCCCCEecCchHHH
Confidence 1 223344444446779999999999999999876643
No 38
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=98.98 E-value=3.6e-09 Score=89.58 Aligned_cols=145 Identities=11% Similarity=0.063 Sum_probs=102.4
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH--------------------HHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP--------------------TLAIY 82 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~--------------------~~~I~ 82 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++.. ...++
T Consensus 14 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (269)
T 1nzy_A 14 AEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMI 93 (269)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccChHHHHHHHHHHHHHHH
Confidence 45677655 666778888899988888777888887755 67777631 12345
Q ss_pred HHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHH
Q 028125 83 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELS 159 (213)
Q Consensus 83 ~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a 159 (213)
..|..+++||++.+.|.|..+|.-++++||. |++.+++.|.+.....+. .|... .+.+.+
T Consensus 94 ~~l~~~~kPvIAav~G~a~GgG~~lal~cD~--ria~~~a~f~~pe~~~Gl~p~~g~~~----------~l~~~v----- 156 (269)
T 1nzy_A 94 HKIIRVKRPVLAAINGVAAGGGLGISLASDM--AICADSAKFVCAWHTIGIGNDTATSY----------SLARIV----- 156 (269)
T ss_dssp HHHHHCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTCCCCTTHHH----------HHHHHH-----
T ss_pred HHHHhCCCCEEEEECCeeecHHHHHHHhCCE--EEecCCCEEeCcccccCCCCCccHHH----------HHHHHh-----
Confidence 6778889999999999999999999999998 999999998765443322 11111 111111
Q ss_pred HHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 160 RKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 160 ~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
| .....+++-.+..++++||+++||||+|...++
T Consensus 157 ---G--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~ 190 (269)
T 1nzy_A 157 ---G--MRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDE 190 (269)
T ss_dssp ---H--HHHHHHHHHHCCCBCHHHHHHHTSCSCEECHHH
T ss_pred ---h--HHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHH
Confidence 1 122334443467799999999999999987654
No 39
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=98.96 E-value=5.2e-09 Score=88.21 Aligned_cols=147 Identities=10% Similarity=0.023 Sum_probs=101.4
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH---------------HHHHHHHHHh
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP---------------TLAIYDTMQS 87 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~---------------~~~I~~~i~~ 87 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++.. ...++..|..
T Consensus 27 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 106 (257)
T 1szo_A 27 LLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLS 106 (257)
T ss_dssp EEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcCCHHHHHHHHHHHHHHHHHHHc
Confidence 34666532 566777888888888887777787877654 55666531 1245677888
Q ss_pred cCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEE-eCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 88 LKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL-DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 88 ~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~i-H~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
+++||++.+.|.|. +|.-++++||. |++.+++.|.+ .....+..-..-- ...+ .+.. ..
T Consensus 107 ~~kPvIAav~G~a~-GG~~LalacD~--ria~~~a~f~~~pe~~lGl~p~~g~-------~~~l--------~r~v--G~ 166 (257)
T 1szo_A 107 IEVPVIAAVNGPVT-NAPEIPVMSDI--VLAAESATFQDGPHFPSGIVPGDGA-------HVVW--------PHVL--GS 166 (257)
T ss_dssp CCSCEEEEECSCBC-SSTHHHHTSSE--EEEETTCEEECTTSGGGTCCCTTTH-------HHHH--------HHHH--CH
T ss_pred CCCcEEEEECCchH-HHHHHHHHCCE--EEEeCCCEEecCcccccccCCCccH-------HHHH--------HHHc--CH
Confidence 99999999999999 69999999998 99999999986 4433332111000 0011 1111 23
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
....+++-.++.++++||+++||||+|...++
T Consensus 167 ~~A~~llltG~~~~A~eA~~~GLv~~vv~~~~ 198 (257)
T 1szo_A 167 NRGRYFLLTGQELDARTALDYGAVNEVLSEQE 198 (257)
T ss_dssp HHHHHHHHTTCEEEHHHHHHHTSCSEEECHHH
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCceEEeChHH
Confidence 44455555578899999999999999987544
No 40
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=98.96 E-value=3.9e-09 Score=89.18 Aligned_cols=148 Identities=18% Similarity=0.158 Sum_probs=105.9
Q ss_pred cEEEEccc----cCcchHHHHHHHHHhhccCCCCCceEEE----EeCCCCChhH---------------------HHHHH
Q 028125 32 RVIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYMY----INGPGGDVTP---------------------TLAIY 82 (213)
Q Consensus 32 ~iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l~----INSpGG~v~~---------------------~~~I~ 82 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|. .=|.|+++.. ...++
T Consensus 18 ~~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (263)
T 3l3s_A 18 LTLTLGRAPAHPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEACSALM 97 (263)
T ss_dssp EEEEECSTTTCCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccccHHHHHHHHHHHHHHH
Confidence 45777765 6677788888888888777767777663 2344555421 23567
Q ss_pred HHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028125 83 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 162 (213)
Q Consensus 83 ~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~t 162 (213)
..|..+++||++.+.|.|..+|.-++++||. |++.++++|.+-....+.. .. ... ..+ .+.
T Consensus 98 ~~l~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~-~~--g~~-----~~l--------~r~- 158 (263)
T 3l3s_A 98 LDLAHCPKPTIALVEGIATAAGLQLMAACDL--AYASPAARFCLPGVQNGGF-CT--TPA-----VAV--------SRV- 158 (263)
T ss_dssp HHHHTCSSCEEEEESSEEETHHHHHHHHSSE--EEECTTCEEECCTTTTTSC-CH--HHH-----HHH--------HTT-
T ss_pred HHHHhCCCCEEEEECCEEEHHHHHHHHHCCE--EEecCCCEEeCchhccCCC-Cc--cHH-----HHH--------HHH-
Confidence 7888999999999999999999999999998 9999999998766555443 11 100 111 111
Q ss_pred CCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 163 GQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 163 g~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
+......+++-.++.++++||+++||||+|...++.
T Consensus 159 -vG~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l 194 (263)
T 3l3s_A 159 -IGRRAVTEMALTGATYDADWALAAGLINRILPEAAL 194 (263)
T ss_dssp -SCHHHHHHHHHHCCEEEHHHHHHHTSSSEECCHHHH
T ss_pred -cCHHHHHHHHHcCCCCCHHHHHHCCCccEEeCHHHH
Confidence 344555555555688999999999999999876543
No 41
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=98.95 E-value=4e-09 Score=89.17 Aligned_cols=151 Identities=16% Similarity=0.196 Sum_probs=103.1
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEE----eCCCCChhH------------HHH-HHHHH-H-
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYI----NGPGGDVTP------------TLA-IYDTM-Q- 86 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~I----NSpGG~v~~------------~~~-I~~~i-~- 86 (213)
..+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.= =|.|+++.. ... ++..| .
T Consensus 19 v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~ 98 (265)
T 3rsi_A 19 VVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLSDGWMVRDGSAPPLDPATIGKGLLLS 98 (265)
T ss_dssp EEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC--------------CCCHHHHHHHTTSS
T ss_pred EEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCCcccccchHHHHHHhHHHHHHHHHHh
Confidence 355777765 66777888999998888777777776632 233444420 023 67778 7
Q ss_pred -hcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 028125 87 -SLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQP 165 (213)
Q Consensus 87 -~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~ 165 (213)
.+++||++.+.|.|..+|.-++++||. |++.++++|.+.....+..-..-- ...+. +. +.
T Consensus 99 ~~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~-------~~~l~--------~~--vG 159 (265)
T 3rsi_A 99 HTLTKPLIAAVNGACLGGGCEMLQQTDI--RVSDEHATFGLPEVQRGLVPGAGS-------MVRLK--------RQ--IP 159 (265)
T ss_dssp CCCSSCEEEEECSCEETHHHHHHTTCSE--EEEETTCEEECGGGGGTCCCTTTH-------HHHHH--------HH--SC
T ss_pred cCCCCCEEEEECCeeeHHHHHHHHHCCE--EEecCCCEEECchhccCCCCCccH-------HHHHH--------HH--hC
Confidence 889999999999999999999999998 999999999865554432211000 01111 11 23
Q ss_pred HHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 166 FEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 166 ~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
.....+++-.++.++++||+++||||+|...++..
T Consensus 160 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~ 194 (265)
T 3rsi_A 160 YTKAMEMILTGEPLTAFEAYHFGLVGHVVPAGTAL 194 (265)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHTTSCSEEESTTCHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEecChhHHH
Confidence 34444555446789999999999999999876543
No 42
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=98.95 E-value=1.3e-08 Score=86.17 Aligned_cols=149 Identities=10% Similarity=0.058 Sum_probs=105.0
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH------------------HHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP------------------TLAIYDT 84 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~------------------~~~I~~~ 84 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |-|+++.. ...++..
T Consensus 15 a~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (268)
T 3i47_A 15 GLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLEDSLVLGNLMYS 94 (268)
T ss_dssp EEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHHHHHHHHHHHHHHHHH
Confidence 45777655 677778888898988887777777777543 34555532 1245677
Q ss_pred HHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 028125 85 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQ 164 (213)
Q Consensus 85 i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~ 164 (213)
|..+++||++.+.|.|..+|.-++++||- |++.+++.|.+-....+..... ... .+. + ..
T Consensus 95 l~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~---g~~--~l~---~--------~v-- 154 (268)
T 3i47_A 95 ISQSPKPTIAMVQGAAFGGGAGLAAACDI--AIASTSARFCFSEVKLGLIPAV---ISP--YVV---R--------AI-- 154 (268)
T ss_dssp HHHCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCTT---THH--HHH---H--------HH--
T ss_pred HHhCCCCEEEEECCEEEhHhHHHHHhCCE--EEEcCCCEEECcccccCCCccc---HHH--HHH---H--------Hh--
Confidence 88899999999999999999999999998 9999999987655444322110 000 111 1 11
Q ss_pred CHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 165 PFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 165 ~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
......+++-.+..++++||+++||||+|...++..
T Consensus 155 G~~~A~~llltg~~i~A~eA~~~GLV~~vv~~~~l~ 190 (268)
T 3i47_A 155 GERAAKMLFMSAEVFDATRAYSLNLVQHCVPDDTLL 190 (268)
T ss_dssp CHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHH
T ss_pred CHHHHHHHHHcCCccCHHHHHHcCCCcEeeChhHHH
Confidence 233444555456889999999999999999876543
No 43
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=98.95 E-value=3.2e-09 Score=89.49 Aligned_cols=147 Identities=14% Similarity=0.207 Sum_probs=102.4
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEE-eCC-----CCChhH--------------HHHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYI-NGP-----GGDVTP--------------TLAIYDTMQ 86 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~I-NSp-----GG~v~~--------------~~~I~~~i~ 86 (213)
.+|+|+.+ ++.++...+.+.+..++.++ .+.|+|.= +.| |+++.. ...++..|.
T Consensus 15 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~ 93 (261)
T 1ef8_A 15 AVIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQ 93 (261)
T ss_dssp EEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHHH
T ss_pred EEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCchhHHHHHHHHHHHHHHH
Confidence 45677654 55667788888888887766 77777765 443 676632 346678888
Q ss_pred hcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 87 SLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 87 ~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
.+++||++.+.|.|.++|.-++++||. |++.+++.|.+.....+..-.. .. ... +.+ -+..
T Consensus 94 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~---g~----~~~--------l~r--~vG~ 154 (261)
T 1ef8_A 94 KFPKPIISMVEGSVWGGAFEMIMSSDL--IIAASTSTFSMTPVNLGVPYNL---VG----IHN--------LTR--DAGF 154 (261)
T ss_dssp HCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTCCCCH---HH----HHT--------TSS--SSCH
T ss_pred hCCCCEEEEECCEEEeHhHHHHHhCCE--EEecCCCEEeCchhccCCCCCc---cH----HHH--------HHH--HhCH
Confidence 999999999999999999999999998 9999999987644332221110 00 000 111 1233
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
....+++-.++.++++||+++||||+|...++
T Consensus 155 ~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~ 186 (261)
T 1ef8_A 155 HIVKELIFTASPITAQRALAVGILNHVVEVEE 186 (261)
T ss_dssp HHHHHHHHHCCCEEHHHHHHTTSCSEEECHHH
T ss_pred HHHHHHHHcCCccCHHHHHHCCCcccccCHHH
Confidence 44455554467899999999999999987544
No 44
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=98.94 E-value=9.3e-09 Score=87.09 Aligned_cols=145 Identities=13% Similarity=0.106 Sum_probs=99.1
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEE----EeCCCCChh----------HHHHHHHHHHhcCCCe
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMY----INGPGGDVT----------PTLAIYDTMQSLKSPV 92 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~----INSpGG~v~----------~~~~I~~~i~~~~~~v 92 (213)
.+|+|+-+ ++.++...+.+.+..++.+ +.+.|+|. .=|.|+++. ....++..|..+++||
T Consensus 32 ~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~l~~~~kPv 110 (264)
T 3he2_A 32 LTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDAFAADYPDRLIELHKAMDASPMPV 110 (264)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCTTGGGHHHHHHHHHHHHHHCSSCE
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccchhhHHHHHHHHHHHHHHHhCCCCE
Confidence 45777655 6667788888888877665 67777765 235566654 2456778889999999
Q ss_pred EEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Q 028125 93 GTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKD 172 (213)
Q Consensus 93 ~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~ 172 (213)
++.+.|.|.++|.-++++||. |++.+++.|.+-....+.....- ....+ .+.. ......++
T Consensus 111 IAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g-------~~~~L--------~r~v--G~~~A~~l 171 (264)
T 3he2_A 111 VGAINGPAIGAGLQLAMQCDL--RVVAPDAFFQFPTSKYGLALDNW-------SIRRL--------SSLV--GHGRARAM 171 (264)
T ss_dssp EEEECSCEETHHHHHHHHSSE--EEECTTCEEECTHHHHTCCCCHH-------HHHHH--------HHHH--CHHHHHHH
T ss_pred EEEECCcEEcchhHHHHhCCE--EEEcCCCEEECcccccCcCCcch-------HHHHH--------HHHh--CHHHHHHH
Confidence 999999999999999999998 99999999875443333221110 01111 1111 23344455
Q ss_pred hcCCceeCHHHHHHcCCceEecCC
Q 028125 173 LSRIKRFGSQEALEYGLIDRIIRP 196 (213)
Q Consensus 173 ~~~~~~~sa~EA~~~GLiD~I~~~ 196 (213)
+-.+..++++||+++||||+|...
T Consensus 172 lltG~~i~A~eA~~~GLV~~v~~~ 195 (264)
T 3he2_A 172 LLSAEKLTAEIALHTGMANRIGTL 195 (264)
T ss_dssp HHHCCCEEHHHHHHHTSCSEECCH
T ss_pred HHcCCCccHHHHHHCCCeEEEecH
Confidence 444678999999999999999753
No 45
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=98.94 E-value=6.6e-09 Score=88.91 Aligned_cols=148 Identities=17% Similarity=0.154 Sum_probs=105.5
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEE----eCCCCChhH----------------HHHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYI----NGPGGDVTP----------------TLAIYDTMQ 86 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~I----NSpGG~v~~----------------~~~I~~~i~ 86 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.= =|-|+++.. ...++..|.
T Consensus 37 a~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (286)
T 3myb_A 37 VTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSREYYEKLFARCTDVMLAIQ 116 (286)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHHHHHHHHHHHHHHHHHHH
Confidence 45677664 56677888888888887777777777753 244555432 235667788
Q ss_pred hcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 87 SLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 87 ~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
.+++||++.+.|.|..+|.-++++||. |++.+++.|.+-....+.. ..- -. .. +.+. +..
T Consensus 117 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~lGl~-~~g---~~----~~--------L~r~--vG~ 176 (286)
T 3myb_A 117 RLPAPVIARVHGIATAAGCQLVAMCDL--AVATRDARFAVSGINVGLF-CST---PG----VA--------LSRN--VGR 176 (286)
T ss_dssp HSSSCEEEEECSCEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCC-CHH---HH----HH--------HTTT--SCH
T ss_pred cCCCCEEEEECCeehHHHHHHHHhCCE--EEEcCCCEEECcccccCCC-Cch---HH----HH--------HHHH--cCH
Confidence 899999999999999999999999998 9999999998666555443 110 00 01 1111 334
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
....+++-.++.++++||+++||||+|...++.
T Consensus 177 ~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l 209 (286)
T 3myb_A 177 KAAFEMLVTGEFVSADDAKGLGLVNRVVAPKAL 209 (286)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGH
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCCcEecCHHHH
Confidence 455555544677999999999999999986654
No 46
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=98.93 E-value=2e-08 Score=85.53 Aligned_cols=147 Identities=14% Similarity=0.041 Sum_probs=102.6
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhHH------------------------
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTPT------------------------ 78 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~~------------------------ 78 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++..-
T Consensus 20 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (280)
T 1pjh_A 20 FIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVA 99 (280)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSSHHHHHHHHTHH
T ss_pred EEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhcccccccchhhhHHHHHHHHHH
Confidence 45677665 667778888899988887777777777543 566666421
Q ss_pred --HHHHHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeec-cCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHH
Q 028125 79 --LAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM-PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIF 155 (213)
Q Consensus 79 --~~I~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~-p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~ 155 (213)
..++..|..+++||++.+.|.|..+|.-++++||. |++. +++.|.+.....+..-..-- ...+
T Consensus 100 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~--~ia~~~~a~f~~pe~~lGl~p~~g~-------~~~l----- 165 (280)
T 1pjh_A 100 RNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDI--VYSINDKVYLLYPFANLGLITEGGT-------TVSL----- 165 (280)
T ss_dssp HHHHHHHHHHHCCSEEEEEECSCEEHHHHHHHHHSSE--EEESSTTCEEECCHHHHTCCCCTTH-------HHHH-----
T ss_pred HHHHHHHHHHhCCCCEEEEECCeeeeHHHHHHHHCCE--EEEeCCCCEEeCchhhcCCCCCccH-------HHHH-----
Confidence 13456788899999999999999999999999998 9999 99998765443332111000 0011
Q ss_pred HHHHHHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCc
Q 028125 156 KELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 197 (213)
Q Consensus 156 ~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~ 197 (213)
.+..| .....+++-.++.++++||+++||||+|...+
T Consensus 166 ---~r~vG--~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~ 202 (280)
T 1pjh_A 166 ---PLKFG--TNTTYECLMFNKPFKYDIMCENGFISKNFNMP 202 (280)
T ss_dssp ---HHHHC--HHHHHHHHHTTCCEEHHHHHHTTCCSEECCCC
T ss_pred ---HHHhC--HHHHHHHHHhCCCCCHHHHHHCCCcceeeCCc
Confidence 11112 23445555556789999999999999998764
No 47
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=98.93 E-value=1.3e-08 Score=87.12 Aligned_cols=150 Identities=11% Similarity=0.056 Sum_probs=100.8
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChh----------------------HHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVT----------------------PTLA 80 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~----------------------~~~~ 80 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |-|+++. ....
T Consensus 35 a~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (290)
T 3sll_A 35 ALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDE 114 (290)
T ss_dssp EEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccchhHHHHHHHHHHH
Confidence 45777664 556677888888888877776777776432 3444432 1235
Q ss_pred HHHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCC-hHHHHHHHHHHHHHHHHHHHHHH
Q 028125 81 IYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ-ADDIRNEADELLRVRDYIFKELS 159 (213)
Q Consensus 81 I~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~-~~d~~~~~~~l~~~~~~~~~~~a 159 (213)
++..|..+++||++.+.|.|..+|.-++++||. |++.+++.|.+-....+..-. .-- ...+.+
T Consensus 115 ~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~p~~~g~-------~~~L~r------- 178 (290)
T 3sll_A 115 VILTLRRMHQPVIAAINGAAIGGGLCLALACDV--RVASQDAYFRAAGINNGLTASELGL-------SYLLPR------- 178 (290)
T ss_dssp HHHHHHHCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECTTTTTTSCSCCTTH-------HHHHHH-------
T ss_pred HHHHHHhCCCCEEEEECCeehHHHHHHHHHCCE--EEEeCCCEEECchhccCcCCCcccH-------HHHHHH-------
Confidence 667888899999999999999999999999998 999999998865554432111 100 001111
Q ss_pred HHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 160 RKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 160 ~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
.. ......+++-.++.++++||+++||||+|...++..
T Consensus 179 -~v--G~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~ 216 (290)
T 3sll_A 179 -AI--GTSRASDIMLTGRDVDADEAERIGLVSRKVASESLL 216 (290)
T ss_dssp -HH--CHHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHH
T ss_pred -Hh--CHHHHHHHHHcCCCCCHHHHHHCCCccEEeChhHHH
Confidence 11 223334444446779999999999999999876543
No 48
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=98.92 E-value=4.1e-09 Score=89.50 Aligned_cols=147 Identities=13% Similarity=0.067 Sum_probs=103.0
Q ss_pred cEEEEccc----cCcchHHHHHHHHHhhccCCCCCceEEEE----eCCCCChhHH-----------------HHHHHHHH
Q 028125 32 RVIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYMYI----NGPGGDVTPT-----------------LAIYDTMQ 86 (213)
Q Consensus 32 ~iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l~I----NSpGG~v~~~-----------------~~I~~~i~ 86 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.= =|.|+++..- ..++..|.
T Consensus 25 ~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 104 (272)
T 3qk8_A 25 LNLVLDSPGLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIRIMREARDLVLNLV 104 (272)
T ss_dssp EEEEECCHHHHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCcCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccccchHHHHHHHHHHHHHHHHHH
Confidence 45777665 67777888899998888777777777643 2445555321 24567788
Q ss_pred hcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028125 87 SLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRKTG 163 (213)
Q Consensus 87 ~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg 163 (213)
.+++||++.+.|.|..+|.-++++||. |++.+++.|.+.....+. .|... .+.+. .
T Consensus 105 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~----------~L~r~--------v- 163 (272)
T 3qk8_A 105 NLDKPVVSAIRGPAVGAGLVVALLADI--SVASATAKIIDGHTKLGVAAGDHAAI----------CWPLL--------V- 163 (272)
T ss_dssp TCCSCEEEEECSEEEHHHHHHHHHSSE--EEEETTCEEECCHHHHTSCSCSSHHH----------HTHHH--------H-
T ss_pred hCCCCEEEEECCeeehHHHHHHHhCCE--EEEcCCCEEECchhccCCCCCccHHH----------HHHHH--------h-
Confidence 899999999999999999999999998 999999998765443321 11111 11111 1
Q ss_pred CCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 164 QPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 164 ~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
......+++-.++.++++||+++||||+|...++..
T Consensus 164 -G~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~ 199 (272)
T 3qk8_A 164 -GMAKAKYYLLTCETLSGEEAERIGLVSTCVDDDEVL 199 (272)
T ss_dssp -CHHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHH
T ss_pred -CHHHHHHHHHcCCCCCHHHHHHCCCCcEeeCHhHHH
Confidence 223334444446789999999999999999876543
No 49
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=98.92 E-value=1.6e-08 Score=88.39 Aligned_cols=145 Identities=11% Similarity=0.072 Sum_probs=105.2
Q ss_pred EEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCC-----------CCChhH-------------------
Q 028125 33 VIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGP-----------GGDVTP------------------- 77 (213)
Q Consensus 33 iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSp-----------GG~v~~------------------- 77 (213)
+|+|+-+ ++.++...|.+.|..++.+++++.|+|.=+.+ |+++..
T Consensus 69 ~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 148 (334)
T 3t8b_A 69 RVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDV 148 (334)
T ss_dssp EEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC-----------------
T ss_pred EEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhcccccccccccchhhhH
Confidence 4666654 66677888999998888877788888875554 666532
Q ss_pred -------HHHHHHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeec-cCCeEEEeCCCccC---CCChHHHHHHHHH
Q 028125 78 -------TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM-PLSRIALDSPAGAA---RGQADDIRNEADE 146 (213)
Q Consensus 78 -------~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~-p~s~i~iH~p~~~~---~G~~~d~~~~~~~ 146 (213)
...++..|+.+++||++.+.|.|..+|.-++++||- |++. +++.|.+-....+. .|-..-+
T Consensus 149 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~A~GgG~~LalacD~--riAs~~~A~f~~pe~~lGl~p~~gg~~~L------ 220 (334)
T 3t8b_A 149 ARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDL--TLASREYARFKQTDADVGSFDGGYGSAYL------ 220 (334)
T ss_dssp -----CCHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSE--EEEETTTCEEECCCTTCSSSSCCSCHHHH------
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCccccCcchhHhhCCE--EEEeCCCcEEECcccccCCCCcccHHHHH------
Confidence 124667888999999999999999999999999998 9999 99999876655442 1222111
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 147 LLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 147 l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
. +.+ ......+++-.++.++|+||+++||||+|...++.
T Consensus 221 -~---r~v----------G~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l 259 (334)
T 3t8b_A 221 -A---RQV----------GQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAEL 259 (334)
T ss_dssp -H---HHH----------HHHHHHHHHHHCCEEEHHHHHHHTSCSEEECGGGH
T ss_pred -H---HHh----------hHHHHHHHHHhCCcCCHHHHHHCCCCcEecCHHHH
Confidence 1 111 11233444444678999999999999999987654
No 50
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=98.92 E-value=1.9e-08 Score=83.45 Aligned_cols=149 Identities=19% Similarity=0.207 Sum_probs=102.3
Q ss_pred cEEEEccc----cCcchHHHHHHHHHhhccCCCCCceEEE----EeCCCCChhH---------------HHHHHHHHHhc
Q 028125 32 RVIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYMY----INGPGGDVTP---------------TLAIYDTMQSL 88 (213)
Q Consensus 32 ~iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l~----INSpGG~v~~---------------~~~I~~~i~~~ 88 (213)
.+|+++-+ ++.++...+.+.+..++.+ +.+.|+|. .=|-|+++.. ...++..|..+
T Consensus 16 ~~itlnrp~~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 94 (233)
T 3r6h_A 16 GVIRMDDGKVNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEAKPAIDMLRGGFELSYRLLSY 94 (233)
T ss_dssp EEEEECCSSSCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---CHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccChHHHHHHHHHHHHHHHHHHhC
Confidence 45777654 5566778888888877765 46555552 2344555432 24567788899
Q ss_pred CCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Q 028125 89 KSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEK 168 (213)
Q Consensus 89 ~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~ 168 (213)
++||++.+.|.|..+|.-++++||. |++.++++|.+-....+..-. ... ... +.++ +....
T Consensus 95 ~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~~~--~~g-----~~~--------l~~~--~g~~~ 155 (233)
T 3r6h_A 95 PKPVVIACTGHAIAMGAFLLCSGDH--RVAAHAYNVQANEVAIGMTIP--YAA-----MEV--------LKLR--LTPSA 155 (233)
T ss_dssp SSCEEEEECSEEETHHHHHHTTSSE--EEECTTCCEECCGGGGTCCCC--HHH-----HHH--------HHHH--SCHHH
T ss_pred CCCEEEEECCcchHHHHHHHHhCCE--EEEeCCcEEECchhhhCCCCC--ccH-----HHH--------HHHH--hCHHH
Confidence 9999999999999999999999998 999999999865554443211 110 011 1111 22344
Q ss_pred HHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 169 ITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 169 i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
..+++-.++.++++||+++||||+|...++..
T Consensus 156 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~ 187 (233)
T 3r6h_A 156 YQQAAGLAKTFFGETALAAGFIDEISLPEVVL 187 (233)
T ss_dssp HHHHHHSCCEECHHHHHHHTSCSEECCGGGHH
T ss_pred HHHHHHcCCcCCHHHHHHcCCCcEeeCHHHHH
Confidence 55555557889999999999999999876543
No 51
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=98.92 E-value=2.5e-08 Score=84.75 Aligned_cols=150 Identities=12% Similarity=0.125 Sum_probs=103.3
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH-------------------HHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP-------------------TLAIYD 83 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~-------------------~~~I~~ 83 (213)
.+|+|+-| ++.++...+.+.+..++.++..+.|+|.=+ |-|+++.. ...++.
T Consensus 26 a~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 105 (274)
T 4fzw_C 26 MTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVR 105 (274)
T ss_dssp EEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHHHHHHHTHHHHHH
T ss_pred EEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHHHHHHHHHHHHHH
Confidence 44667654 666778888899988888777777666422 23344321 124667
Q ss_pred HHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028125 84 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTG 163 (213)
Q Consensus 84 ~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg 163 (213)
.|..+++||++.+.|.|..+|.-++++||- |++.++++|.+.....+..-..-- ...+.+ .
T Consensus 106 ~l~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~L~r--------~-- 166 (274)
T 4fzw_C 106 RLAKLPKPVICAVNGVAAGAGATLALGGDI--VIAARSAKFVMAFSKLGLIPDCGG-------TWLLPR--------V-- 166 (274)
T ss_dssp HHHHCSSCEEEEECSCEETHHHHHHHTSSE--EEEETTCEEECCGGGTTCCCTTTH-------HHHHHH--------H--
T ss_pred HHHHCCCCEEEEECCceeecCceeeeccce--EEECCCCEEECcccCcccCCCccH-------HHHHHH--------H--
Confidence 888999999999999999999999999998 999999999876555442111100 011111 1
Q ss_pred CCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 164 QPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 164 ~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
.......+++-.++.++++||+++||||+|...++..
T Consensus 167 vG~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~ 203 (274)
T 4fzw_C 167 AGRARAMGLALLGNQLSAEQAHEWGMIWQVVDDETLA 203 (274)
T ss_dssp TCHHHHHHHHHHCCCEEHHHHHHTTSSSEEECGGGHH
T ss_pred hhHHHHHHHHHhCCcCCHHHHHHCCCceEEeChHHHH
Confidence 2234444454446789999999999999999876643
No 52
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=98.91 E-value=4.6e-09 Score=89.31 Aligned_cols=148 Identities=10% Similarity=0.097 Sum_probs=101.2
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhHHH------------H--------HH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTPTL------------A--------IY 82 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~~~------------~--------I~ 82 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++..-. . ++
T Consensus 20 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (276)
T 2j5i_A 20 AFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQWQW 99 (276)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHHHHHHHHHHHHHHH
Confidence 45667654 566677888888888877666677777654 6788874321 1 12
Q ss_pred HHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028125 83 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 162 (213)
Q Consensus 83 ~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~t 162 (213)
..|..+++||++.+.|.|..+|.-++++||. |++.+++.|.+.....+..-..-- ...+ .+.
T Consensus 100 ~~l~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~l--------~r~- 161 (276)
T 2j5i_A 100 KLLRMYAKPTIAMVNGWCFGGGFSPLVACDL--AICADEATFGLSEINWGIPPGNLV-------SKAM--------ADT- 161 (276)
T ss_dssp TTTTTCSSCEEEEECSCEEGGGHHHHHHSSE--EEEETTCEEECGGGGGTCCCCTTH-------HHHH--------HHH-
T ss_pred HHHHhCCCCEEEEECCeeehhHHHHHHhCCE--EEEcCCCEEeCcccccCCCCcchH-------HHHH--------HHH-
Confidence 3455677999999999999999999999998 999999999865544432111000 0011 111
Q ss_pred CCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 163 GQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 163 g~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
.......+++-.+..++++||+++||||+|...++
T Consensus 162 -vG~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~ 196 (276)
T 2j5i_A 162 -VGHRQSLMYIMTGKTFGGQKAAEMGLVNESVPLAQ 196 (276)
T ss_dssp -SCHHHHHHHHHHCCEEEHHHHHHHTSSSEEECHHH
T ss_pred -hCHHHHHHHHHhCCcccHHHHHHcCCccEeeCHHH
Confidence 22344445554467899999999999999987654
No 53
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=98.91 E-value=7.4e-09 Score=88.72 Aligned_cols=146 Identities=14% Similarity=0.173 Sum_probs=105.2
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCC-----CCChhH-----------------HHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGP-----GGDVTP-----------------TLAIYDT 84 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSp-----GG~v~~-----------------~~~I~~~ 84 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+.+ |+++.. ...+++.
T Consensus 39 a~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (289)
T 3t89_A 39 AKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQ 118 (289)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC----------------CTHHHHHHH
T ss_pred EEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccchhhhHHHHHHHHHHHHH
Confidence 45667654 56677888888888888877788888876665 666532 2356778
Q ss_pred HHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCcc----CCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 028125 85 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA----ARGQADDIRNEADELLRVRDYIFKELSR 160 (213)
Q Consensus 85 i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~----~~G~~~d~~~~~~~l~~~~~~~~~~~a~ 160 (213)
|..+++||++.+.|.|..+|.-++++||- |++.+++.|.+-.+..+ ..| ..- +. +
T Consensus 119 l~~~~kPvIAaV~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~~~~~g-~~~-------L~---r-------- 177 (289)
T 3t89_A 119 IRTCPKPVVAMVAGYSIGGGHVLHMMCDL--TIAADNAIFGQTGPKVGSFDGGWG-ASY-------MA---R-------- 177 (289)
T ss_dssp HHHCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTCCCCSTT-THH-------HH---H--------
T ss_pred HHcCCCCEEEEECCEeehHHHHHHHhCCE--EEEeCCCEEeccccccCCCCCchH-HHH-------HH---H--------
Confidence 89999999999999999999999999998 99999999986544333 112 111 11 1
Q ss_pred HhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 161 KTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 161 ~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
.. ......+++-.+..++++||+++||||+|...++..
T Consensus 178 ~v--G~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~ 215 (289)
T 3t89_A 178 IV--GQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLE 215 (289)
T ss_dssp HH--CHHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHH
T ss_pred hc--CHHHHHHHHHcCCcccHHHHHHCCCceEeeCHHHHH
Confidence 11 223344444345779999999999999999876543
No 54
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=98.90 E-value=2.8e-09 Score=90.76 Aligned_cols=147 Identities=18% Similarity=0.211 Sum_probs=98.1
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEE----eCCCCChhHHH---------------HHHHHHH
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYI----NGPGGDVTPTL---------------AIYDTMQ 86 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~I----NSpGG~v~~~~---------------~I~~~i~ 86 (213)
..+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.= =|-|+++.... .+++.|.
T Consensus 30 v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (278)
T 4f47_A 30 TLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKDGSYDPSRIDALL 109 (278)
T ss_dssp EEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC----------------------CTTCBTTTT
T ss_pred EEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhhhHHHHHHHHHHHHHHH
Confidence 355777665 56677888888898888777777777642 23344442211 1223445
Q ss_pred ---hcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCC---CChHHHHHHHHHHHHHHHHHHHHHHH
Q 028125 87 ---SLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR---GQADDIRNEADELLRVRDYIFKELSR 160 (213)
Q Consensus 87 ---~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~---G~~~d~~~~~~~l~~~~~~~~~~~a~ 160 (213)
.+++||++.+.|.|..+|.-++++||. |++.+++.|.+.....+.. |... .+ .+
T Consensus 110 ~~~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~----------~L--------~r 169 (278)
T 4f47_A 110 KGRRLKKPLIAAVEGPAIAGGTEILQGTDI--RVAAESAKFGISEAKWSLYPMGGSAV----------RL--------VR 169 (278)
T ss_dssp BSCCCSSCEEEEECSEEETHHHHHHTTCSE--EEEETTCEEECCGGGGTCCCTTSHHH----------HH--------HH
T ss_pred HhcCCCCCEEEEECCEEehHHHHHHHhCCE--EEEcCCCEEECcccccCCCCCccHHH----------HH--------HH
Confidence 778999999999999999999999998 9999999998655544321 1111 11 11
Q ss_pred HhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 161 KTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 161 ~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
. +......+++-.+..++++||+++||||+|...++.
T Consensus 170 ~--vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 206 (278)
T 4f47_A 170 Q--IPYTVACDLLLTGRHITAAEAKEMGLVGHVVPDGQA 206 (278)
T ss_dssp H--SCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECTTCH
T ss_pred H--hCHHHHHHHHHcCCcCCHHHHHHCCCceEeeChhHH
Confidence 1 233444555544678999999999999999987664
No 55
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=98.90 E-value=8.5e-09 Score=87.72 Aligned_cols=147 Identities=15% Similarity=0.137 Sum_probs=103.7
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEE-----eCC-----CCChhH----------------HHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYI-----NGP-----GGDVTP----------------TLA 80 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~I-----NSp-----GG~v~~----------------~~~ 80 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.= +.+ |+++.. ...
T Consensus 21 a~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 100 (275)
T 4eml_A 21 AKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLD 100 (275)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC--------------CCCHHH
T ss_pred EEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhcccccchhhHHHHHHHH
Confidence 44666654 56677888888888888877788887776 444 555421 235
Q ss_pred HHHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHH
Q 028125 81 IYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKE 157 (213)
Q Consensus 81 I~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~ 157 (213)
+++.|..+++||++.+.|.|..+|.-++++||. |++.+++.|.+-....+. .|-..- +. +
T Consensus 101 ~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~~g~~~-------L~---r----- 163 (275)
T 4eml_A 101 LQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDL--TIAADNAIFGQTGPKVGSFDGGFGSSY-------LA---R----- 163 (275)
T ss_dssp HHHHHHHSSSEEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTCCCCSTTTHH-------HH---H-----
T ss_pred HHHHHHhCCCCEEEEECCeeehHHHHHHHhCCE--EEEcCCCEEECcccccCCCCCccHHHH-------HH---H-----
Confidence 677889999999999999999999999999998 999999999864433221 111111 11 1
Q ss_pred HHHHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 158 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 158 ~a~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
.. ......+++-.+..++++||+++||||+|...++..
T Consensus 164 ---~v--G~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~ 201 (275)
T 4eml_A 164 ---IV--GQKKAREIWYLCRQYSAQEAERMGMVNTVVPVDRLE 201 (275)
T ss_dssp ---HH--CHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHH
T ss_pred ---Hh--HHHHHHHHHHhCCCcCHHHHHHcCCccEeeCHHHHH
Confidence 11 223334444446779999999999999999876643
No 56
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=98.90 E-value=5e-09 Score=88.66 Aligned_cols=145 Identities=10% Similarity=0.044 Sum_probs=100.6
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH----------------HHHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP----------------TLAIYDTMQ 86 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~----------------~~~I~~~i~ 86 (213)
.+|+|+.+ ++.++...+.+.+..++.+++.+.|+|.=+ |.|+++.. ...++..|.
T Consensus 35 a~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~ 114 (263)
T 2j5g_A 35 LEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQNLL 114 (263)
T ss_dssp EEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45667643 666778888888888887777787877644 66666521 124567788
Q ss_pred hcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEE-eCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028125 87 SLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL-DSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRKT 162 (213)
Q Consensus 87 ~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~i-H~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~t 162 (213)
.+++||++.+.|.|. +|.-++++||. |++.+++.|.+ -....+. .|-.. .+.+.+
T Consensus 115 ~~~kPvIAav~G~a~-GG~~LalacD~--ria~~~a~f~~~pe~~lGl~p~~g~~~----------~L~r~v-------- 173 (263)
T 2j5g_A 115 DIEVPVISAVNGAAL-LHSEYILTTDI--ILASENTVFQDMPHLNAGIVPGDGVHI----------LWPLAL-------- 173 (263)
T ss_dssp TCCSCEEEEECSEEC-SCGGGGGGCSE--EEEETTCEECCCHHHHHTCCCCSSHHH----------HHHHHH--------
T ss_pred hCCCCEEEEECCcch-HHHHHHHhCCE--EEEcCCCEEecCcccccccCCCccHHH----------HHHHHc--------
Confidence 899999999999999 79999999998 99999999875 3222221 11111 111111
Q ss_pred CCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 163 GQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 163 g~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
......+++-.+..|+++||+++||||+|...++.
T Consensus 174 --G~~~A~~llltG~~~~A~eA~~~GLv~~vv~~~~l 208 (263)
T 2j5g_A 174 --GLYRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKL 208 (263)
T ss_dssp --HHHHHHHHHHTTCCEEHHHHHHTTSCSEEECGGGH
T ss_pred --CHHHHHHHHHcCCCCCHHHHHHCCCccEecChHHH
Confidence 12334445545678999999999999999976554
No 57
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=98.89 E-value=7.9e-08 Score=79.66 Aligned_cols=148 Identities=15% Similarity=0.164 Sum_probs=102.1
Q ss_pred cEEEEccc----cCcchHHHHHHHHHhhccCCCCCceEE----EEeCCCCChhH--------------HHHHHHHHHhcC
Q 028125 32 RVIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYM----YINGPGGDVTP--------------TLAIYDTMQSLK 89 (213)
Q Consensus 32 ~iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l----~INSpGG~v~~--------------~~~I~~~i~~~~ 89 (213)
.+|+++-+ ++.++...+.+.+..++.+ .+.|+| ..=|-|+++.. ...++..|..++
T Consensus 17 ~~itlnrp~~Nal~~~~~~~L~~al~~~~~d--~~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 94 (232)
T 3ot6_A 17 ATLTLNNGKVNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPGILSGGYDLKVMTSSAEAAINLVAQGSTLARRMLSHP 94 (232)
T ss_dssp EEEEECCTTTTCBCHHHHHHHHHHHHHHHHT--TCEEEEECBTEEEECCBCHHHHHHCHHHHHHHHHHHHHHHHHHHTCS
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHhcC--CCEEEEECCCCCccCCcCHHHHhhChHHHHHHHHHHHHHHHHHHcCC
Confidence 45667664 5566677888888877653 344444 23345566543 245678889999
Q ss_pred CCeEEEEccccchHHHHHHhcCCCCcEeeccC-CeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Q 028125 90 SPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL-SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEK 168 (213)
Q Consensus 90 ~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~-s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~ 168 (213)
+||++.+.|.|..+|.-++++||- |++.++ ++|.+.....+.. +.+... ..+ .++ +....
T Consensus 95 kPvIAav~G~a~GgG~~lalacD~--ria~~~~a~f~~pe~~~Gl~--p~~~g~-----~~l--------~~~--ig~~~ 155 (232)
T 3ot6_A 95 FPIIVACPGHAVAKGAFLLLSADY--RIGVAGPFSIGLNEVQIGMT--MHHAGI-----ELA--------RDR--LRKSA 155 (232)
T ss_dssp SCEEEECCEEEETHHHHHHTTSSE--EEEECSSCCEECCTTTTTCC--CCHHHH-----HHH--------HHH--SCHHH
T ss_pred CCEEEEECCEeehHHHHHHHHCCE--EEEeCCCcEEECcccccCCC--CchhHH-----HHH--------HHH--hCHHH
Confidence 999999999999999999999998 999998 7888655544432 111110 111 111 23455
Q ss_pred HHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 169 ITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 169 i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
..+++-.++.++++||+++||||+|...++..
T Consensus 156 a~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~ 187 (232)
T 3ot6_A 156 FNRSVINAEMFDPEGAMAAGFLDKVVSVEELQ 187 (232)
T ss_dssp HHHHHTSCCEECHHHHHHHTSCSEEECTTTHH
T ss_pred HHHHHHcCCccCHHHHHHCCCCCEecCHHHHH
Confidence 56666667889999999999999999876643
No 58
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=98.88 E-value=3e-08 Score=83.56 Aligned_cols=148 Identities=16% Similarity=0.120 Sum_probs=99.5
Q ss_pred cEEEEc-cc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhHH-------------------HHHH
Q 028125 32 RVIFIG-QN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTPT-------------------LAIY 82 (213)
Q Consensus 32 ~iI~i~-G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~~-------------------~~I~ 82 (213)
.+|+|+ .+ ++.++...+.+.+..++.++ .+.|+|.=+ |.|+++..- ..++
T Consensus 16 ~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~-~r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (261)
T 2gtr_A 16 THILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFV 94 (261)
T ss_dssp EEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESSSCSBCEECHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEecCCCccccccCchhhhhccccchhhHHHHHHHHHHHHH
Confidence 456776 22 56677788888888877654 455555432 456666321 2345
Q ss_pred HHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028125 83 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 162 (213)
Q Consensus 83 ~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~t 162 (213)
..|..+++||++.+.|.|..+|.-++++||. |++.+++.|.+-....+..-..-- ...+. +..
T Consensus 95 ~~l~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~l~--------~~v 157 (261)
T 2gtr_A 95 NTFIQFKKPIIVAVNGPAIGLGASILPLCDV--VWANEKAWFQTPYTTFGQSPDGCS-------TVMFP--------KIM 157 (261)
T ss_dssp HHHHHCCSCEEEEECSCEETHHHHTGGGSSE--EEEETTCEEECCTTTTTCCCCTTH-------HHHHH--------HHH
T ss_pred HHHHhCCCCEEEEECCeEeeHHHHHHHhCCE--EEEcCCCEEeCchhccCCCccchH-------HHHHH--------HHc
Confidence 6778889999999999999999999999998 999999999876655442211000 00111 111
Q ss_pred CCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 163 GQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 163 g~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
| .....+++-.+..++++||+++||||+|...++.
T Consensus 158 G--~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 192 (261)
T 2gtr_A 158 G--GASANEMLLSGRKLTAQEACGKGLVSQVFWPGTF 192 (261)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHTTSCSEEECGGGH
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCCcccccChhHH
Confidence 2 2344444434677999999999999999876553
No 59
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=98.88 E-value=1.6e-08 Score=85.41 Aligned_cols=143 Identities=17% Similarity=0.099 Sum_probs=101.0
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEE----EeCCCCChhH--------------------HHHH
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMY----INGPGGDVTP--------------------TLAI 81 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~----INSpGG~v~~--------------------~~~I 81 (213)
..+|+|+-+ ++.++...+.+.+..++.+++.+.|+|. .=|.|+++.. ...+
T Consensus 21 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (267)
T 3oc7_A 21 VARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSSAYDMAVERAREMAAL 100 (267)
T ss_dssp EEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC-----------CHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccCchhhhhhHHHHHHHHHHH
Confidence 456777765 6677788899999888887778888774 3345665532 2345
Q ss_pred HHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 028125 82 YDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 161 (213)
Q Consensus 82 ~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~ 161 (213)
+..|..+++||++.+.|.|..+|.-++++||. |++.+++.|.+.....+..-..-- ... +. +
T Consensus 101 ~~~l~~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~-------~~~--------l~-~ 162 (267)
T 3oc7_A 101 MRAIVESRLPVIAAIDGHVRAGGFGLVGACDI--AVAGPRSSFALTEARIGVAPAIIS-------LTL--------LP-K 162 (267)
T ss_dssp HHHHHHCSSCEEEEECSEEETTHHHHHHHSSE--EEECTTCEEECCGGGGTCCCTTTH-------HHH--------TT-T
T ss_pred HHHHHhCCCCEEEEEcCeecccchHHHHHCCE--EEEcCCCEEeCcccccCCCcchhH-------HHH--------HH-H
Confidence 67788899999999999999999999999998 999999998865544432111000 000 11 1
Q ss_pred hCCCHHHHHHHhcCCceeCHHHHHHcCCceEe
Q 028125 162 TGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 193 (213)
Q Consensus 162 tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I 193 (213)
+......+++-.++.++++||+++||||+|
T Consensus 163 --vG~~~A~~l~ltg~~~~a~eA~~~GLv~~v 192 (267)
T 3oc7_A 163 --LSARAAARYYLTGEKFDARRAEEIGLITMA 192 (267)
T ss_dssp --SCHHHHHHHHHHCCCBCHHHHHHHTSSSEE
T ss_pred --hCHHHHHHHHHcCCccCHHHHHHCCChhhh
Confidence 234444555545678999999999999999
No 60
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=98.88 E-value=9.9e-09 Score=89.86 Aligned_cols=129 Identities=19% Similarity=0.140 Sum_probs=91.6
Q ss_pred ccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHH----------HHHHHHHHhcCCCeEEEEccccchHHHH
Q 028125 37 GQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPT----------LAIYDTMQSLKSPVGTHCVGFAYHLAGF 106 (213)
Q Consensus 37 ~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~----------~~I~~~i~~~~~~v~t~~~G~aaSaa~~ 106 (213)
.|.++++..+.+...+..++.. .-+|+..+||||..+..+ ..+...+..+++|+++++.|.|.|+|++
T Consensus 152 ~G~~~~~~~~Ka~r~~~~A~~~--~lPlI~lvDt~Ga~~g~~aE~~g~~~~~a~~l~al~~~~vPvIavV~G~a~GGGa~ 229 (339)
T 2f9y_A 152 FGMPAPEGYRKALRLMQMAERF--KMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGAL 229 (339)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHT--TCCEEEEEEESCSCCSHHHHHTTHHHHHHHHHHHHHTCSSCEEEEEEEEEEHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHhhc--CCCEEEEEeCCCCccchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeCCcCcHHHH
Confidence 4666777778877777655443 458999999999876544 3455667888999999999999999999
Q ss_pred HHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHHHH
Q 028125 107 LLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 186 (213)
Q Consensus 107 I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~ 186 (213)
++++||. ++|.|++.+.+-.|... ..++-... ....+..++ ..++|++|++
T Consensus 230 ~~~~~D~--via~p~A~~~v~~Peg~----------------------asil~~~~-~~~~~Aae~----~~itA~~a~~ 280 (339)
T 2f9y_A 230 AIGVGDK--VNMLQYSTYSVISPEGC----------------------ASILWKSA-DKAPLAAEA----MGIIRPRLKE 280 (339)
T ss_dssp TTCCCSE--EEECTTCEEESSCHHHH----------------------HHHHSSCS-TTHHHHHHH----HTCSHHHHHT
T ss_pred HHhccCe--eeecCCCEEEeeccchH----------------------HHHHHHhh-ccHHHHHHH----cCCCHHHHHH
Confidence 9999998 99999999885322210 00000000 011222222 4589999999
Q ss_pred cCCceEecCC
Q 028125 187 YGLIDRIIRP 196 (213)
Q Consensus 187 ~GLiD~I~~~ 196 (213)
+|+||+|+..
T Consensus 281 ~GlVd~VV~e 290 (339)
T 2f9y_A 281 LKLIDSIIPE 290 (339)
T ss_dssp TTSCSCCCCC
T ss_pred cCCeeEEecC
Confidence 9999999874
No 61
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=98.88 E-value=1.7e-08 Score=84.86 Aligned_cols=145 Identities=11% Similarity=0.053 Sum_probs=102.6
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH---------------HHHHHHHHHh
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP---------------TLAIYDTMQS 87 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~---------------~~~I~~~i~~ 87 (213)
.+|+|+-+ ++.++...+.+.+..++. ++.+.|+|.=. |-|+++.. ...++..|..
T Consensus 18 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (254)
T 3isa_A 18 WTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSEGDLLLRMVRIEMLLQRVAG 96 (254)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhccCchhHHHHHHHHHHHHHHHHh
Confidence 45777665 666778888888888765 45666655422 33444421 2346778889
Q ss_pred cCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Q 028125 88 LKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFE 167 (213)
Q Consensus 88 ~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~ 167 (213)
+++||++.+.|.|..+|.-++++||. |++.++++|.+.....+...-. ..+ .+.. ...
T Consensus 97 ~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~pg~----------~~l--------~~~v--G~~ 154 (254)
T 3isa_A 97 SPSLTLALAHGRNFGAGVDLFAACKW--RYCTPEAGFRMPGLKFGLVLGT----------RRF--------RDIV--GAD 154 (254)
T ss_dssp CSSEEEEEECSEEETHHHHHHHHSSE--EEECTTCEEECCGGGGTCCCSH----------HHH--------HHHH--CHH
T ss_pred CCCCEEEEECCeEeecchhHHHhCCE--EEEcCCCEEECchhccCccHHH----------HHH--------HHHc--CHH
Confidence 99999999999999999999999998 9999999998766555443210 111 1112 234
Q ss_pred HHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 168 KITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 168 ~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
...+++-.+..++++||+++||||+|...++.
T Consensus 155 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 186 (254)
T 3isa_A 155 QALSILGSARAFDADEARRIGFVRDCAAQAQW 186 (254)
T ss_dssp HHHHHHTTTCEEEHHHHHHTTSSSEECCGGGH
T ss_pred HHHHHHHhCCCCcHHHHHHCCCccEEeChhHH
Confidence 44556656788999999999999999987653
No 62
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=98.88 E-value=3.8e-09 Score=89.05 Aligned_cols=147 Identities=16% Similarity=0.093 Sum_probs=100.0
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhHH------HHHHHHHHhcCCCeEEEE
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTPT------LAIYDTMQSLKSPVGTHC 96 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~~------~~I~~~i~~~~~~v~t~~ 96 (213)
.+|+|+-+ ++.++...+.+.+..++.++..+.|+|.=+ |.|+++..- ..+...+..+++||++.+
T Consensus 20 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~l~~~~kPvIAav 99 (256)
T 3pe8_A 20 RTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDTTELPDISPKWPDMTKPVIGAI 99 (256)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC---------CCCCCCCSSCEEEEE
T ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhhHHHHHHHHHHHhCCCCEEEEE
Confidence 45777765 667778889999988887777777777533 334554321 122344667789999999
Q ss_pred ccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHh
Q 028125 97 VGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDL 173 (213)
Q Consensus 97 ~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~ 173 (213)
.|.|..+|.-++++||. |++.+++.|.+.....+. .|-.. .+ .+.. ......+++
T Consensus 100 ~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~----------~L--------~r~v--G~~~A~~l~ 157 (256)
T 3pe8_A 100 NGAAVTGGLELALYCDI--LIASENAKFADTHARVGLMPTWGLSV----------RL--------PQKV--GVGLARRMS 157 (256)
T ss_dssp CSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTCCCCSSHHH----------HH--------HHHH--CHHHHHHHH
T ss_pred CCeeechHHHHHHhCCE--EEEcCCCEEECchhhhCCCCcccHHH----------HH--------HHhc--CHHHHHHHH
Confidence 99999999999999998 999999999765443332 11111 11 1111 223344444
Q ss_pred cCCceeCHHHHHHcCCceEecCCcccc
Q 028125 174 SRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 174 ~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
-.+..++++||+++||||+|...++..
T Consensus 158 ltg~~~~a~eA~~~GLv~~vv~~~~l~ 184 (256)
T 3pe8_A 158 LTGDYLSAQDALRAGLVTEVVAHDDLL 184 (256)
T ss_dssp HHCCCEEHHHHHHHTSCSCEECGGGHH
T ss_pred HcCCCCCHHHHHHCCCCeEEeCHhHHH
Confidence 446779999999999999999876543
No 63
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=98.87 E-value=5.7e-08 Score=81.46 Aligned_cols=150 Identities=16% Similarity=0.164 Sum_probs=104.5
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeC----CCCCh--------------hHHHHHHHHHHhc
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYING----PGGDV--------------TPTLAIYDTMQSL 88 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INS----pGG~v--------------~~~~~I~~~i~~~ 88 (213)
.+|+|+-| ++.++...+.+.+..++.+++.+.|+|.=+. -|+++ .....++..|..+
T Consensus 11 a~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (254)
T 3hrx_A 11 LVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSGL 90 (254)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHTC
T ss_pred EEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccchhhHHHHHHHHHHHHHHHhC
Confidence 45777765 6777888899999988887777776664221 12332 2334677889999
Q ss_pred CCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Q 028125 89 KSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEK 168 (213)
Q Consensus 89 ~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~ 168 (213)
++||++.+.|.|..+|.-++++||- |++.++++|.+-....+..-..-- ...+.+. +....
T Consensus 91 ~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~lGl~p~~g~-------~~~L~r~----------vG~~~ 151 (254)
T 3hrx_A 91 EKPLVVAVNGVAAGAGMSLALWGDL--RLAAVGASFTTAFVRIGLVPDSGL-------SFLLPRL----------VGLAK 151 (254)
T ss_dssp SSCEEEEECSEEETHHHHHHTTCSE--EEEETTCEEECCGGGGTCCCCTTH-------HHHHHHH----------HCHHH
T ss_pred CCCEEEEECCEeeehhhhhhhccce--eeEcCCCEEEchhhCcCcCCcccH-------HHHHHHH----------hCcch
Confidence 9999999999999999999999998 999999999765554432111100 0111111 12233
Q ss_pred HHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 169 ITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 169 i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
..+++-.+..++++||+++||||+|...++..
T Consensus 152 A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~ 183 (254)
T 3hrx_A 152 AQELLLLSPRLSAEEALALGLVHRVVPAEKLM 183 (254)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSCSEEECGGGHH
T ss_pred HHHHhhcCcccCHHHHHHCCCeEEecCcHHHH
Confidence 44444446779999999999999999876643
No 64
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=98.87 E-value=1.3e-08 Score=88.78 Aligned_cols=129 Identities=19% Similarity=0.158 Sum_probs=90.6
Q ss_pred ccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHH----------HHHHHHHHhcCCCeEEEEccccchHHHH
Q 028125 37 GQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPT----------LAIYDTMQSLKSPVGTHCVGFAYHLAGF 106 (213)
Q Consensus 37 ~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~----------~~I~~~i~~~~~~v~t~~~G~aaSaa~~ 106 (213)
.|.++++..+.+...+..++.. .-+|+..+||||..+..+ ..+...+..+++|+++++.|.|.|+|++
T Consensus 138 ~G~~~~~~~~Ka~r~~~~A~~~--~~PlI~lvdt~Ga~~g~~ae~~g~~~~~a~~l~al~~~~vPvIavV~G~a~GGGa~ 215 (327)
T 2f9i_A 138 FGMAHPEGYRKALRLMKQAEKF--NRPIFTFIDTKGAYPGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGAL 215 (327)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHT--TCCEEEEEEESCSCCCHHHHHTTHHHHHHHHHHHHHTCSSCEEEEEEEEEBHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHhhc--CCCEEEEEeCCCCCcchhhhhhhhHHHHHHHHHHHHhCCCCEEEEEECCcChHHHH
Confidence 3556777777777777655443 458999999999886554 3355667888999999999999999999
Q ss_pred HHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHHHH
Q 028125 107 LLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 186 (213)
Q Consensus 107 I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~ 186 (213)
++++||. ++|.|++.+.+-.|.... ..+ .+.. ....+..++ ..++|++|++
T Consensus 216 ~~~~~D~--via~~~A~~~v~~peg~a-----------~il---~~~~---------~~a~~A~e~----~~itA~~a~~ 266 (327)
T 2f9i_A 216 GIGIANK--VLMLENSTYSVISPEGAA-----------ALL---WKDS---------NLAKIAAET----MKITAHDIKQ 266 (327)
T ss_dssp TTCCCSE--EEEETTCBCBSSCHHHHH-----------HHH---SSCG---------GGHHHHHHH----HTCBHHHHHH
T ss_pred HHHCCCE--EEEcCCceEeecCchHHH-----------HHH---HHHh---------cchHHHHHH----cCCCHHHHHH
Confidence 9999998 999999998753222100 000 0000 000111122 5589999999
Q ss_pred cCCceEecCC
Q 028125 187 YGLIDRIIRP 196 (213)
Q Consensus 187 ~GLiD~I~~~ 196 (213)
+|+||+|+..
T Consensus 267 ~GlVd~VV~e 276 (327)
T 2f9i_A 267 LGIIDDVISE 276 (327)
T ss_dssp TTSSSEEECC
T ss_pred cCCceEEecC
Confidence 9999999974
No 65
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=98.87 E-value=1e-08 Score=87.28 Aligned_cols=141 Identities=16% Similarity=0.105 Sum_probs=100.8
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEE----EeCCCCChhH-----------------HHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMY----INGPGGDVTP-----------------TLAIYDTM 85 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~----INSpGG~v~~-----------------~~~I~~~i 85 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|. .=|.|+++.. ...++..|
T Consensus 39 ~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l 118 (276)
T 3rrv_A 39 RIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAKTIRDGREIVLGM 118 (276)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHHHHHHHHHHHHHHHH
Confidence 45667665 5667788888888888877777877774 3355666532 12466778
Q ss_pred HhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028125 86 QSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRKT 162 (213)
Q Consensus 86 ~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~t 162 (213)
..+++||++.+.|.|..+|.-++++||. |++.+++.|.+-....+. .|... .+ .+.
T Consensus 119 ~~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~----------~L--------~r~- 177 (276)
T 3rrv_A 119 ARCRIPVVAAVNGPAVGLGCSLVALSDI--VYIAENAYLADPHVQVGLVAADGGPL----------TW--------PLH- 177 (276)
T ss_dssp HHCSSCEEEEECSCEETHHHHHHHTSSE--EEEETTCEEECCHHHHTCCCCSSHHH----------HG--------GGT-
T ss_pred HhCCCCEEEEECceeeHHHHHHHHHCCE--EEEeCCCEEECchhccCcCCCccHHH----------HH--------HHH-
Confidence 8899999999999999999999999998 999999998754433221 11110 11 111
Q ss_pred CCCHHHHHHHhcCCceeCHHHHHHcCCceEec
Q 028125 163 GQPFEKITKDLSRIKRFGSQEALEYGLIDRII 194 (213)
Q Consensus 163 g~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~ 194 (213)
+......+++-.++.++++||+++||||+|.
T Consensus 178 -vG~~~A~ellltG~~i~A~eA~~~GLv~~vv 208 (276)
T 3rrv_A 178 -ISLLLAKEYALTGTRISAQRAVELGLANHVA 208 (276)
T ss_dssp -SCHHHHHHHHHHCCCEEHHHHHHHTSCSEEE
T ss_pred -hCHHHHHHHHHcCCCCCHHHHHHcCCHHHHH
Confidence 2344455555456789999999999999998
No 66
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=98.86 E-value=3.8e-08 Score=84.36 Aligned_cols=148 Identities=15% Similarity=0.101 Sum_probs=100.2
Q ss_pred cEEEEc-cc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhHH-------------------HHHH
Q 028125 32 RVIFIG-QN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTPT-------------------LAIY 82 (213)
Q Consensus 32 ~iI~i~-G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~~-------------------~~I~ 82 (213)
.+|+|+ -+ ++.++...+.+.+..++.++ .+.|+|.=+ |.|+++..- ..++
T Consensus 34 ~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~-~r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (291)
T 2fbm_A 34 TQIVLSTRSTEKNALNTEVIKEIVNALNSAAADD-SKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFV 112 (291)
T ss_dssp EEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSS-CSEEEEEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCC-CeEEEEECCCCCccCCcCHHHHHhcccccchhHHHHHHHHHHHHH
Confidence 456776 22 66677788888888877654 455544422 466776431 1345
Q ss_pred HHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028125 83 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 162 (213)
Q Consensus 83 ~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~t 162 (213)
..|..+++||++.+.|.|..+|.-++++||- |++.+++.|.+-....+..-..-- ...+ .+..
T Consensus 113 ~~l~~~~kPvIAaV~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~lGl~p~~g~-------~~~L--------~r~v 175 (291)
T 2fbm_A 113 NTFIQFKKPIVVSVNGPAIGLGASILPLCDL--VWANEKAWFQTPYTTFGQSPDGCS-------SITF--------PKMM 175 (291)
T ss_dssp HHHHHCCSCEEEEECSCEETHHHHTGGGSSE--EEEETTCEEECCHHHHTCCCCTTH-------HHHH--------HHHH
T ss_pred HHHHhCCCCEEEEECCeeecHHHHHHHhCCE--EEEeCCCEEECcHHhcCCCCcccH-------HHHH--------HHHH
Confidence 6678889999999999999999999999998 999999998765443322110000 0011 1111
Q ss_pred CCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 163 GQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 163 g~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
......+++-.+..|+|+||+++||||+|...++.
T Consensus 176 --G~~~A~el~ltg~~i~A~eA~~~GLV~~vv~~~~l 210 (291)
T 2fbm_A 176 --GKASANEMLIAGRKLTAREACAKGLVSQVFLTGTF 210 (291)
T ss_dssp --CHHHHHHHHTSCCEEEHHHHHHTTSCSEEECSTTS
T ss_pred --hHHHHHHHHHcCCccCHHHHHHCCCcceecChhHH
Confidence 23445556656788999999999999999877654
No 67
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=98.85 E-value=2.7e-08 Score=84.06 Aligned_cols=150 Identities=15% Similarity=0.152 Sum_probs=104.3
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCC----CCChhHHHH---------------HHHHH-
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGP----GGDVTPTLA---------------IYDTM- 85 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSp----GG~v~~~~~---------------I~~~i- 85 (213)
..+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+.+ |+++..-.. +++.|
T Consensus 19 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 98 (265)
T 3swx_A 19 VLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGASLTPEGGINPWQVDG 98 (265)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--CCCCCTTCCCTTCCSS
T ss_pred EEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchhHHHHHHHHHHHHHHH
Confidence 345777765 66777888888888888777777777765433 566544322 23345
Q ss_pred HhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 028125 86 QSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQP 165 (213)
Q Consensus 86 ~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~ 165 (213)
..+++||++.+.|.|..+|.-++++||. |++.+++.|.+-....+..-..-- ...+.+ .. .
T Consensus 99 ~~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~-------~~~l~r--------~v--G 159 (265)
T 3swx_A 99 RQLSKPLLVAVHGKVLTLGIELALAADI--VIADETATFAQLEVNRGIYPFGGA-------TIRFPR--------TA--G 159 (265)
T ss_dssp CCCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTSCCCSSH-------HHHHHH--------HH--C
T ss_pred HhCCCCEEEEEcCeeehHHHHHHHHCCE--EEEcCCCEEECcccccccCCCccH-------HHHHHH--------Hh--h
Confidence 6778999999999999999999999998 999999999876554432111000 001111 11 2
Q ss_pred HHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 166 FEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 166 ~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
.....+++-.+..++++||+++||||+|...++.
T Consensus 160 ~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l 193 (265)
T 3swx_A 160 WGNAMRWMLTADTFDAVEAHRIGIVQEIVPVGEH 193 (265)
T ss_dssp HHHHHHHHTTCCCEEHHHHHHTTSCSEEESTTCH
T ss_pred HHHHHHHHHcCCcCCHHHHHHcCCCCEecChhHH
Confidence 3444555656788999999999999999987654
No 68
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=98.85 E-value=2.6e-09 Score=90.34 Aligned_cols=149 Identities=17% Similarity=0.163 Sum_probs=102.0
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEE----EeCCCCChhHH--------------HHHHHHHHhc
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMY----INGPGGDVTPT--------------LAIYDTMQSL 88 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~----INSpGG~v~~~--------------~~I~~~i~~~ 88 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|. .=|.|+++..- ..++..|..+
T Consensus 18 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~ 97 (265)
T 3qxz_A 18 AVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNPDFSASPVQPAAFEL 97 (265)
T ss_dssp EEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCSSCCCSCCSSSCGGGS
T ss_pred EEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHHHHHHHHHHHHHHHhC
Confidence 45777665 6677788899999888877777777774 23455555321 2345668888
Q ss_pred CCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Q 028125 89 KSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEK 168 (213)
Q Consensus 89 ~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~ 168 (213)
++||++.+.|.|..+|.-++++||. |++.+++.|.+.....+..-..--. ..+.+.+ | ...
T Consensus 98 ~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~-------~~l~r~v--------G--~~~ 158 (265)
T 3qxz_A 98 RTPVIAAVNGHAIGIGMTLALHADI--RILAEEGRYAIPQVRFGVAPDALAH-------WTLPRLV--------G--TAV 158 (265)
T ss_dssp SSCEEEEECSEEETHHHHHHTTSSE--EEEETTCCEECCGGGGTSCCCTTHH-------HHTHHHH--------H--HHH
T ss_pred CCCEEEEECCEEehHhHHHHHHCCE--EEEcCCCEEECcccccCcCCCccHH-------HHHHHHh--------C--HHH
Confidence 9999999999999999999999998 9999999998755544321110000 0111111 1 122
Q ss_pred HHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 169 ITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 169 i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
..+++-.+..++++||+++||||+|...++.
T Consensus 159 A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l 189 (265)
T 3qxz_A 159 AAELLLTGASFSAQRAVETGLANRCLPAGKV 189 (265)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSCSEEECHHHH
T ss_pred HHHHHHcCCCcCHHHHHHCCCccEeeCHHHH
Confidence 2334434567999999999999999876543
No 69
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=98.85 E-value=2e-08 Score=87.69 Aligned_cols=146 Identities=12% Similarity=0.050 Sum_probs=101.2
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhHH------------------------
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTPT------------------------ 78 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~~------------------------ 78 (213)
.+|+|+-+ ++.++...+.+.+..++.++..+.|+|.=+ |-|+++..-
T Consensus 46 a~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (333)
T 3njd_A 46 ARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGGGSPYEGTVLSGKTQA 125 (333)
T ss_dssp EEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC---------------CCTTSTTCHHHHH
T ss_pred EEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhcccccccccccccccccccccc
Confidence 45667665 667788889999988887777776666422 334443221
Q ss_pred ---------------------HHHHHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCCh
Q 028125 79 ---------------------LAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQA 137 (213)
Q Consensus 79 ---------------------~~I~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~ 137 (213)
..++..|..+++||++.+.|.|..+|.-++++||- |++.+++.|.+.....+. -+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~--rias~~a~f~~pe~~lG~--~P 201 (333)
T 3njd_A 126 LNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQ--VIAAADAKIGYPPMRVWG--VP 201 (333)
T ss_dssp HTTCSSSCCCHHHHHHHHHHHHHHHTHHHHSSSCEEEEECSEEETHHHHHHTTSSE--EEECTTCEEECGGGGTTC--CC
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEeHHHHHHHHhCCE--EEECCCCeeechhhceec--cC
Confidence 12345677899999999999999999999999998 999999998865544321 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 138 DDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 138 ~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
.. . .+ .+.. ......+++-.+..|+++||+++||||+|...++.
T Consensus 202 ~~-g----~l-----------~~~v--G~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l 245 (333)
T 3njd_A 202 AA-G----LW-----------AHRL--GDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADL 245 (333)
T ss_dssp TT-C----CH-----------HHHH--CHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGGGH
T ss_pred HH-H----HH-----------HHHH--HHHHHHHHHhcCCCCCHHHHHHCCCccEecChHHH
Confidence 00 0 01 1111 33555566666788999999999999999877654
No 70
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=98.85 E-value=1.7e-08 Score=86.56 Aligned_cols=147 Identities=14% Similarity=0.097 Sum_probs=104.0
Q ss_pred CcEEEEccc----cCcchHHHHHHHHHhhccCCCCCceEEEEeCC----CC-ChhH------------------HHHHHH
Q 028125 31 ERVIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYMYINGP----GG-DVTP------------------TLAIYD 83 (213)
Q Consensus 31 ~~iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSp----GG-~v~~------------------~~~I~~ 83 (213)
..+|+|+-+ ++.++...+.+.+..++.++..+.|+|.=+.+ || ++.. ...++.
T Consensus 18 Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (289)
T 3h0u_A 18 VLSATFNAPPMNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAGGPGDASLGMLFR 97 (289)
T ss_dssp EEEEEECCTTTCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTSSTTCCSHHHHHH
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchhhhHHHHHHHHHHHHH
Confidence 345777765 66677888888898888777778888876543 44 6521 235677
Q ss_pred HHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccC-CeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHH
Q 028125 84 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL-SRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELS 159 (213)
Q Consensus 84 ~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~-s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a 159 (213)
.|..+++||++.+.|.|..+|.-++++||. |++.++ ++|.+-....+. .|... .+.+
T Consensus 98 ~l~~~~kPvIAaV~G~a~GgG~~LalacD~--ria~~~~a~f~~pe~~lGl~p~~g~~~----------~L~r------- 158 (289)
T 3h0u_A 98 KLSQLPAVTIAKLRGRARGAGSEFLLACDM--RFASRENAILGQPEVGIGAPPGAGAIQ----------HLTR------- 158 (289)
T ss_dssp HHHTCSSEEEEEECSEEETHHHHHHHHSSE--EEEETTTCEEECTHHHHTSCCCSSHHH----------HHHH-------
T ss_pred HHHhCCCCEEEEECCEeehhhHHHHHhCCE--EEEeCCCcEEeCchhhcCCCCCccHHH----------HHHH-------
Confidence 889999999999999999999999999998 999999 998764433221 11111 1111
Q ss_pred HHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 160 RKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 160 ~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
.. ......+++-.+..++++||+++||||+|...++.
T Consensus 159 -~v--G~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l 195 (289)
T 3h0u_A 159 -LL--GRGRALEAVLTSSDFDADLAERYGWVNRAVPDAEL 195 (289)
T ss_dssp -HH--CHHHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHH
T ss_pred -Hh--CHHHHHHHHHcCCCCCHHHHHHCCCccEecCHHHH
Confidence 11 22333444444677999999999999999976553
No 71
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=98.84 E-value=6.5e-08 Score=81.44 Aligned_cols=150 Identities=13% Similarity=0.089 Sum_probs=103.8
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH-------------HHHHHHHHHhcC
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP-------------TLAIYDTMQSLK 89 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~-------------~~~I~~~i~~~~ 89 (213)
.+|+|+-| ++.++...+.+.+..++.++..+.|+|.=+ |-|+++.+ ...++..|..++
T Consensus 16 a~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~ 95 (258)
T 4fzw_A 16 LLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLAATLNDTRPQLWARLQAFN 95 (258)
T ss_dssp EEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHHHHHTCSHHHHHHHHHTCC
T ss_pred EEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhhhHHHhHHHHHHHHHHHCC
Confidence 45777654 666778888888888877766666665321 22444422 236788899999
Q ss_pred CCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Q 028125 90 SPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKI 169 (213)
Q Consensus 90 ~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i 169 (213)
+||++.+.|.|..+|.-++++||. |++.+++.|.+.....+..-..-- ...+.+. . .....
T Consensus 96 kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~l~r~--------v--G~~~A 156 (258)
T 4fzw_A 96 KPLIAAVNGYALGAGCELALLCDV--VVAGENARFGLPEITLGIMPGAGG-------TQRLIRS--------V--GKSLA 156 (258)
T ss_dssp SCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCCSSH-------HHHHHHH--------H--CHHHH
T ss_pred CCEEEEEcCcceeeeeEeecccce--EEECCCCEEECcccCCCcCCCchH-------HHHHHHH--------h--CHHHH
Confidence 999999999999999999999998 999999999876554432111100 0111111 1 22334
Q ss_pred HHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 170 TKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 170 ~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
.+++-.+..++++||+++||||+|...++..
T Consensus 157 ~~llltg~~i~a~eA~~~GLv~~vv~~~~l~ 187 (258)
T 4fzw_A 157 SKMVLSGESITAQQAQQAGLVSDVFPSDLTL 187 (258)
T ss_dssp HHHHHHCCCEEHHHHHHHTSCSEEECTTTHH
T ss_pred HHHHHcCCcCcHHHHHHCCCeeEEeCchHHH
Confidence 4455446789999999999999999877644
No 72
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=98.82 E-value=2.3e-08 Score=84.19 Aligned_cols=147 Identities=14% Similarity=0.161 Sum_probs=103.7
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCC----CCChhHHH---------------HHHHHH-
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGP----GGDVTPTL---------------AIYDTM- 85 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSp----GG~v~~~~---------------~I~~~i- 85 (213)
..+|+|+-+ ++.++...+.+.+..++.++..+.|+|.=+.+ |+++..-. .++..|
T Consensus 22 v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 101 (258)
T 3lao_A 22 LFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASGFRYPDGGVDPWGVVQ 101 (258)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTBCCCCTTCCCTTSCSS
T ss_pred EEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchhhHHHHHHHHHHHHHHH
Confidence 345777654 56677888888888888777778777765543 56654321 234556
Q ss_pred HhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028125 86 QSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRKT 162 (213)
Q Consensus 86 ~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~t 162 (213)
..+++||++.+.|.|..+|.-++++||. |++.+++.|.+-....+. .|-..-+ . +. .
T Consensus 102 ~~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~~~~L-------~---r~--------v 161 (258)
T 3lao_A 102 PRRSKPLVVAVQGTCWTAGIELMLNADI--AVAARGTRFAHLEVLRGIPPLGGSTVRF-------P---RA--------A 161 (258)
T ss_dssp SCCCSCEEEEECSEEETHHHHHHHTSSE--EEEETTCEEECGGGGTCCCSSCCCCSHH-------H---HH--------H
T ss_pred HhCCCCEEEEECCEeEhHHHHHHHhCCE--EEEcCCCEEeCcccccCCCCCccHHHHH-------H---HH--------h
Confidence 7788999999999999999999999998 999999999875544331 2222111 1 11 1
Q ss_pred CCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 163 GQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 163 g~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
......+++-.++.++++||+++||||+|...++.
T Consensus 162 --G~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l 196 (258)
T 3lao_A 162 --GWTDAMRYILTGDEFDADEALRMRLLTEVVEPGEE 196 (258)
T ss_dssp --CHHHHHHHHTTCCCEEHHHHHHTTSCSEEECTTCH
T ss_pred --CHHHHHHHHHcCCCCCHHHHHHcCCCcEeeChhHH
Confidence 22344455555778999999999999999987654
No 73
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=98.79 E-value=7.8e-08 Score=81.78 Aligned_cols=148 Identities=13% Similarity=0.093 Sum_probs=98.8
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChh---------------HHHHHHHHHHh
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVT---------------PTLAIYDTMQS 87 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~---------------~~~~I~~~i~~ 87 (213)
.+|+|+-+ ++.++...+.+.+..+ +++.+.|+|.=+ |-|+++. ....+++.|..
T Consensus 27 a~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 104 (275)
T 3hin_A 27 LTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERDATEGLVHSQTWHRVFDKIQY 104 (275)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhccChhhHHHHHHHHHHHHHHHHh
Confidence 45777655 5666677777777666 344565555422 2344442 22456778889
Q ss_pred cCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Q 028125 88 LKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFE 167 (213)
Q Consensus 88 ~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~ 167 (213)
+++||++.+.|.|..+|.-++++||- |++.+++.|.+.....+..-..-- ...+.+ .. ...
T Consensus 105 ~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~L~r--------~v--G~~ 165 (275)
T 3hin_A 105 CRVPVIAALKGAVIGGGLELACAAHI--RVAEASAYYALPEGSRGIFVGGGG-------SVRLPR--------LI--GVA 165 (275)
T ss_dssp CSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCCSSH-------HHHHHH--------HH--CHH
T ss_pred CCCCEEEEECCeeehHHHHHHHhCCE--EEEcCCCEEECchhccCCCCCccH-------HHHHHH--------Hh--CHH
Confidence 99999999999999999999999998 999999999876555432111000 011111 11 233
Q ss_pred HHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 168 KITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 168 ~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
...+++-.+..++++||+++||||+|...++..
T Consensus 166 ~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~ 198 (275)
T 3hin_A 166 RMADMMLTGRVYSAAEGVVHGFSQYLIENGSAY 198 (275)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEESSSCHH
T ss_pred HHHHHHHcCCCCCHHHHHHCCCCCEEeChhHHH
Confidence 444444446789999999999999999876643
No 74
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=98.79 E-value=2.5e-08 Score=83.93 Aligned_cols=150 Identities=18% Similarity=0.217 Sum_probs=102.0
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEE----eCCCCChhHHHH----------HHHHHHhcCCC
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYI----NGPGGDVTPTLA----------IYDTMQSLKSP 91 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~I----NSpGG~v~~~~~----------I~~~i~~~~~~ 91 (213)
..+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.= =|-|+++..-.. -+..+ .+++|
T Consensus 17 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~-~~~kP 95 (256)
T 3trr_A 17 VLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSERGLGFTNV-PPRKP 95 (256)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEETTEETTSSS-CCSSC
T ss_pred EEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhhhhhhhHHHh-cCCCC
Confidence 355777765 56677888888888888777777777742 355666644221 01223 56789
Q ss_pred eEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Q 028125 92 VGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITK 171 (213)
Q Consensus 92 v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~ 171 (213)
|++.+.|.|..+|.-++++||. |++.+++.|.+-....+..-..-- ...+ .+. +......+
T Consensus 96 vIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p~~g~-------~~~l--------~r~--vG~~~a~~ 156 (256)
T 3trr_A 96 IIAAVEGFALAGGTELVLSCDL--VVAGRSAKFGIPEVKRGLVAGAGG-------LLRL--------PNR--IPYQVAME 156 (256)
T ss_dssp EEEEECSBCCTHHHHHHHTSSE--EEEETTCEECCCGGGGTCCCCSSH-------HHHH--------HHH--SCHHHHHH
T ss_pred EEEEECCeeeechhHHHHhCCE--EEECCCCEEEehhhccCCCCCccH-------HHHH--------HHH--hCHHHHHH
Confidence 9999999999999999999998 999999998765444332111000 0011 111 23445555
Q ss_pred HhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 172 DLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 172 ~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
++-.+..++++||+++||||+|...++..
T Consensus 157 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~ 185 (256)
T 3trr_A 157 LALTGESFTAEDAAKYGFINRLVDDGQAL 185 (256)
T ss_dssp HHHHCCCEEHHHHGGGTCCSEEECTTCHH
T ss_pred HHHhCCCcCHHHHHHCCCeeEecChHHHH
Confidence 55456789999999999999999876643
No 75
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=98.79 E-value=2.6e-08 Score=85.23 Aligned_cols=149 Identities=11% Similarity=0.067 Sum_probs=103.6
Q ss_pred cEEEEccc----cCcchHHHHHHHHHhhccCCCCCceEEEEe-----CCCCChhH--------------------HHHHH
Q 028125 32 RVIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYMYIN-----GPGGDVTP--------------------TLAIY 82 (213)
Q Consensus 32 ~iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN-----SpGG~v~~--------------------~~~I~ 82 (213)
.+|+|+-+ ++.++...+.+.+..++.++..+.|+|.=. |-|+++.. ...++
T Consensus 20 a~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (287)
T 3gkb_A 20 ARIILDNPPVNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAASAPADVNVFQAVG 99 (287)
T ss_dssp EEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHHTSCTTCCTTHHHH
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccchhhHHHHHHHHHHHHHH
Confidence 45777664 556677888888888877777777777543 34666532 12467
Q ss_pred HHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeecc-CCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 028125 83 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP-LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 161 (213)
Q Consensus 83 ~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p-~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~ 161 (213)
..|..+++||++.+.|.|..+|.-++++||- |++.+ +++|.+-....+..-..-- ...+.+ .
T Consensus 100 ~~l~~~~kPvIAaV~G~a~GgG~~lalacD~--ria~~~~a~f~~pe~~lGl~p~~g~-------~~~L~r--------~ 162 (287)
T 3gkb_A 100 ELIRHQPQVTIVKLAGKARGGGAEFVAAADM--AFAAAETAGLGQIEALMGIIPGGGG-------TQYLRG--------R 162 (287)
T ss_dssp HHHHHCSSEEEEEECSEEETHHHHHHHHSSE--EEEETTTCEEECGGGGGTSCCCSSH-------HHHHHH--------H
T ss_pred HHHHhCCCCEEEEECCeeehHHHHHHHHCCE--EEEeCCCcEEECcccccCCCCCchH-------HHHHHH--------H
Confidence 8889999999999999999999999999998 99999 9999875554432111000 011111 1
Q ss_pred hCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 162 TGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 162 tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
. ......+++-.+..++++||+++||||+|...++.
T Consensus 163 v--G~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l 198 (287)
T 3gkb_A 163 V--GRNRALEVVLTADLFDAETAASYGWINRALPADEL 198 (287)
T ss_dssp H--CHHHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHH
T ss_pred h--CHHHHHHHHHcCCCCCHHHHHHCCCCcEEeChhHH
Confidence 1 22333444444677999999999999999976553
No 76
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=98.79 E-value=1.4e-08 Score=93.51 Aligned_cols=141 Identities=11% Similarity=0.081 Sum_probs=99.8
Q ss_pred cCcchHHHHHHHHHhhccC-CCCCceEEEE-e----CCCCChhHH---------------HHHHHHH----HhcCCCeEE
Q 028125 40 IDEEFSNQILATMLYLDSV-DDSKRVYMYI-N----GPGGDVTPT---------------LAIYDTM----QSLKSPVGT 94 (213)
Q Consensus 40 I~~~~~~~l~~~l~~l~~~-~~~~~I~l~I-N----SpGG~v~~~---------------~~I~~~i----~~~~~~v~t 94 (213)
++.++...+.+.+..++.+ ++.+.|+|.= + |.|+++..- ..+++.| ..+++||++
T Consensus 55 Ls~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~el~~~~~~~~~~~~~~~~~l~~~L~~a~~~~pKPVIA 134 (556)
T 2w3p_A 55 YDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNGLEDSSRHSGLKFLA 134 (556)
T ss_dssp ECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHHHhhcccHHHHHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 3445667788888888777 6788888876 2 677877431 2355677 888999999
Q ss_pred EEccccchHHHHHHhcCCCCcEeeccC--CeEEEeCCC-ccCC-CChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Q 028125 95 HCVGFAYHLAGFLLAGGEKGNRSAMPL--SRIALDSPA-GAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKIT 170 (213)
Q Consensus 95 ~~~G~aaSaa~~I~~ag~~~~r~~~p~--s~i~iH~p~-~~~~-G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~ 170 (213)
.+.|.|.++|+-++++||. |++.++ +.|.+-... .+.. +-.. ... +..++-+......
T Consensus 135 AVnG~AlGGGleLALACD~--rIAse~~~A~FglPEv~~LGL~Pg~Gg--------t~r--------Lp~~RlVG~~rA~ 196 (556)
T 2w3p_A 135 AVNGACAGGGYELALACDE--IYLVDDRSSSVSLPEVPLLGVLPGTGG--------LTR--------VTDKRKVRHDRAD 196 (556)
T ss_dssp EECSEEETHHHHHHHHSSE--EEEECSSSCEEECCHHHHHSSCCTTTH--------HHH--------HHHTSCCCHHHHH
T ss_pred EECCeechhhHHHHHhCCE--EEEcCCCCcEEecccccccCCCCCccH--------HHH--------HHhhccCCHHHHH
Confidence 9999999999999999998 999999 888764433 2211 1100 001 1110223456666
Q ss_pred HHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 171 KDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 171 ~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
+++-.++.++++||+++||||+|....+
T Consensus 197 eLlLTGr~isA~EAl~lGLVdeVVp~~e 224 (556)
T 2w3p_A 197 IFCTVVEGVRGERAKAWRLVDEVVKPNQ 224 (556)
T ss_dssp HHTTCSSCEEHHHHHHTTSCSEEECHHH
T ss_pred HHHHcCCCCCHHHHHHCCCceEEeChhH
Confidence 6766678899999999999999987543
No 77
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=98.77 E-value=1e-08 Score=88.22 Aligned_cols=148 Identities=13% Similarity=0.075 Sum_probs=99.3
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhHHH----------------------
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTPTL---------------------- 79 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~~~---------------------- 79 (213)
..+|+|+-+ ++.++...+.+.+..++.++..+.|+|.=. |-|+++..-.
T Consensus 40 Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (298)
T 3qre_A 40 VAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTMAKAKDANLADLVG 119 (298)
T ss_dssp EEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC----------------------------
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhccccccccccchhHHHHHHHH
Confidence 345777664 666778888898888887777777776422 2334442211
Q ss_pred -HHHHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHH
Q 028125 80 -AIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIF 155 (213)
Q Consensus 80 -~I~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~ 155 (213)
.++..|..+++||++.+.|.|..+|.-++++||. |++.+++.|.+-....+. .|-.. .+
T Consensus 120 ~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~----------~L----- 182 (298)
T 3qre_A 120 ERPPHFVTMLRKPVIAAINGPCVGIGLTQALMCDV--RFAAAGAKFAAVFARRGLIAEFGISW----------IL----- 182 (298)
T ss_dssp -CCTTGGGGSSSCEEEEECSCEETHHHHHHHHSSE--EEEETTCEEECCCCHHHHHCTTSHHH----------HH-----
T ss_pred HHHHHHHHhCCCCEEEEECCceeecchHHHhhCCE--EEEcCCCEEECcccccCCCcchhHHH----------HH-----
Confidence 1234566788999999999999999999999998 999999998765443321 11111 11
Q ss_pred HHHHHHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 156 KELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 156 ~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
.+. +......+++-.+..++++||+++||||+|...++..
T Consensus 183 ---~r~--vG~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~~l~ 222 (298)
T 3qre_A 183 ---PRL--TSWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLM 222 (298)
T ss_dssp ---HHH--SCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHH
T ss_pred ---HHh--cCHHHHHHHHHcCCCCCHHHHHHcCCCeEecCHHHHH
Confidence 111 2334445555446789999999999999999876543
No 78
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=98.75 E-value=3.7e-08 Score=83.27 Aligned_cols=150 Identities=14% Similarity=0.129 Sum_probs=97.3
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEE----eCCCCChhHHHH----------H-HHHHHhcCC
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYI----NGPGGDVTPTLA----------I-YDTMQSLKS 90 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~I----NSpGG~v~~~~~----------I-~~~i~~~~~ 90 (213)
..+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.= =|-|+++..-.. + +..+.. ++
T Consensus 25 v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~-~k 103 (265)
T 3qxi_A 25 ILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVEGRGLGFTERPP-AK 103 (265)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCEETTTEETTTTSCC-SS
T ss_pred EEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhhhhhhhhhHHHhhC-CC
Confidence 345777665 66677888888888888777677766642 244555543211 0 111222 68
Q ss_pred CeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Q 028125 91 PVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKIT 170 (213)
Q Consensus 91 ~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~ 170 (213)
||++.+.|.|..+|.-++++||. |++.+++.|.+.....+..-..-- ...+.+ . +......
T Consensus 104 PvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~l~~--------~--vG~~~a~ 164 (265)
T 3qxi_A 104 PLIAAVEGYALAGGTELALATDL--IVAARDSAFGIPEVKRGLVAGGGG-------LLRLPE--------R--IPYAIAM 164 (265)
T ss_dssp CEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCCSSH-------HHHHHH--------H--SCHHHHH
T ss_pred CEEEEECCceeHHHHHHHHhCCE--EEEcCCCEEECcccccCcCCcccH-------HHHHHH--------H--hCHHHHH
Confidence 99999999999999999999998 999999999866554432111000 011111 1 2334445
Q ss_pred HHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 171 KDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 171 ~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
+++-.++.|+++||+++||||+|...++..
T Consensus 165 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~ 194 (265)
T 3qxi_A 165 ELALTGDNLSAERAHALGMVNVLAEPGAAL 194 (265)
T ss_dssp HHHHHCCCEEHHHHHHTTSCSEEECTTCHH
T ss_pred HHHHcCCCcCHHHHHHCCCccEeeChhHHH
Confidence 555456789999999999999999876543
No 79
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=98.74 E-value=7.9e-08 Score=81.82 Aligned_cols=147 Identities=13% Similarity=0.045 Sum_probs=100.7
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH--------------------HHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP--------------------TLAIY 82 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~--------------------~~~I~ 82 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=. |-|+++.. ...++
T Consensus 31 ~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (279)
T 3t3w_A 31 ATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTLEFIYAHESRRYLEYS 110 (279)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------CCHHHHHHHHHHHTHHHH
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcccccchHHHHHHHHHHHHHHH
Confidence 45677665 666778888888888887776776666533 23444421 12345
Q ss_pred HHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028125 83 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKT 162 (213)
Q Consensus 83 ~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~t 162 (213)
..|..+++||++.+.|.|..+|.-++++||. |++.+++.|.+-....+..+...-.. . + .
T Consensus 111 ~~l~~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~~~~~~~~------~---~--------~- 170 (279)
T 3t3w_A 111 LRWRNVPKPSIAAVQGRCISGGLLLCWPCDL--IIAAEDALFSDPVVLMDIGGVEYHGH------T---W--------E- 170 (279)
T ss_dssp HHHHHCSSCEEEEECSEEEGGGHHHHTTSSE--EEEETTCEEECCGGGGTCSSCSSCCH------H---H--------H-
T ss_pred HHHHhCCCCEEEEECCeEhHHHHHHHHhCCE--EEecCCCEEeCcHHhcCCCCchHHHH------H---h--------h-
Confidence 6788899999999999999999999999998 99999999876554433321100000 0 0 0
Q ss_pred CCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 163 GQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 163 g~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
+......+++-.+..++++||+++||||+|...++.
T Consensus 171 -vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l 206 (279)
T 3t3w_A 171 -LGPRKAKEILFTGRAMTAEEVAQTGMVNRVVPRDRL 206 (279)
T ss_dssp -HCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGH
T ss_pred -cCHHHHHHHHHcCCccCHHHHHHCCCCcEeeChHHH
Confidence 122333444434578999999999999999977654
No 80
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=98.74 E-value=1.4e-08 Score=85.73 Aligned_cols=147 Identities=14% Similarity=0.150 Sum_probs=99.0
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhHHH-------------HHHHHHHhcC
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTPTL-------------AIYDTMQSLK 89 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~~~-------------~I~~~i~~~~ 89 (213)
.+|+|+-+ ++.++...+.+.+..++.++..+.|+|.=+ |-|+++..-. .+...+..++
T Consensus 22 a~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (262)
T 3r9q_A 22 TTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNELHPHGPGPMGPSRLRLS 101 (262)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCCCCTTSSCTTSSTTCCCS
T ss_pred EEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhhHHHhhhhHHHHHHHhCC
Confidence 45777665 666778888888888887777777776422 3344442211 1223455678
Q ss_pred CCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 90 SPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 90 ~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
+||++.+.|.|..+|.-++++||- |++.+++.|.+.....+. .|... .+.+. . ..
T Consensus 102 kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~~~----------~L~r~--------v--G~ 159 (262)
T 3r9q_A 102 KPVIAAISGHAVAGGIELALWCDL--RVVEEDAVLGVFCRRWGVPLIDGGTI----------RLPRL--------I--GH 159 (262)
T ss_dssp SCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECTHHHHTCCCCSSHHH----------HHHHH--------H--CH
T ss_pred CCEEEEECCeeehhhhHHHHhCCE--EEEeCCCEEecchhccCCCCCccHHH----------HHHHH--------h--CH
Confidence 999999999999999999999998 999999998764433221 11111 11111 1 22
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
....+++-.++.++++||+++||||+|...++..
T Consensus 160 ~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~ 193 (262)
T 3r9q_A 160 SRAMDLILTGRPVHANEALDIGLVNRVVARGQAR 193 (262)
T ss_dssp HHHHHHHHHCCCEEHHHHHHTTSCSEEECTTCHH
T ss_pred HHHHHHHHcCCcCCHHHHHHcCCccEecChhHHH
Confidence 3344454446789999999999999999876643
No 81
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=98.74 E-value=6.5e-08 Score=81.83 Aligned_cols=151 Identities=15% Similarity=0.133 Sum_probs=102.7
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe-----CCCCChhHHHHH----------H--HH--HH
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN-----GPGGDVTPTLAI----------Y--DT--MQ 86 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN-----SpGG~v~~~~~I----------~--~~--i~ 86 (213)
..+|+|+-+ ++.++...+.+.+..++.++..+.|+|.=+ |.|+++..-... + .. +.
T Consensus 19 v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (267)
T 3r9t_A 19 VMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHPDHPEWGFAGYVRH 98 (267)
T ss_dssp EEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCSCTTCGGGCGGGTTTC
T ss_pred EEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchhhHHHHhHHHHHHHHH
Confidence 356778776 667778888999988888777787777433 346666442110 0 11 12
Q ss_pred hcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 87 SLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 87 ~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
.+++||++.+.|.|..+|.-++++||. |++.+++.|.+.....+..-..-- ...+ .+. +..
T Consensus 99 ~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~L--------~r~--vG~ 159 (267)
T 3r9t_A 99 FIDKPTIAAVNGTALGGGTELALASDL--VVADERAQFGLPEVKRGLIAAAGG-------VFRI--------AEQ--LPR 159 (267)
T ss_dssp CCSSCEEEEECSEECTHHHHHHHHSSE--EEEETTCEECCGGGGTTCCCTTTH-------HHHH--------HHH--SCH
T ss_pred hCCCCEEEEECCEEEhHHHHHHHhCCE--EEEcCCCEEECcccccCCCCCccH-------HHHH--------HHH--cCH
Confidence 577999999999999999999999998 999999999765544332111000 0111 111 233
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
....+++-.+..++++||+++||||+|...++..
T Consensus 160 ~~A~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~ 193 (267)
T 3r9t_A 160 KVAMRLLLTGEPLSAAAARDWGLINEVVEAGSVL 193 (267)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSSSEEECTTCHH
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCccEEcChhHHH
Confidence 4445555456789999999999999999876643
No 82
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=98.71 E-value=4.3e-08 Score=83.16 Aligned_cols=149 Identities=17% Similarity=0.118 Sum_probs=99.5
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEE----eCCCCChhHHHH----------------------
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYI----NGPGGDVTPTLA---------------------- 80 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~I----NSpGG~v~~~~~---------------------- 80 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.= =|-|+++..-..
T Consensus 22 ~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (274)
T 3tlf_A 22 ATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPYLSTYDQWEAPQE 101 (274)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------CTTCSGGGGSCCCT
T ss_pred EEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccchhhHHHHHHHHHH
Confidence 45777655 56677888888888888777777777642 244566543221
Q ss_pred HHHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 028125 81 IYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSR 160 (213)
Q Consensus 81 I~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~ 160 (213)
++..|..+++||++.+.|.|..+|.-++++||. |++.+++.|.+.....+..- .-- ... +.+
T Consensus 102 ~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~--~ia~~~a~f~~pe~~~Gl~p-~g~-------~~~--------L~r 163 (274)
T 3tlf_A 102 GTPPFRTMAKPVLTAVNGICCGAGMDWVTTTDI--VIASEQATFFDPHVSIGLVA-GRE-------LVR--------VSR 163 (274)
T ss_dssp TCCCTTSCCSCEEEEECSEEEGGGHHHHHHSSE--EEEETTCEEECCGGGGTCCC-CHH-------HHH--------HTT
T ss_pred HHHHHHhCCCCEEEEECCeeehHHHHHHHhCCE--EEEcCCCEEECcccccCccc-chH-------HHH--------HHH
Confidence 234466778999999999999999999999998 99999999987554443221 100 001 111
Q ss_pred HhCCCHHHHHHHhcCCc--eeCHHHHHHcCCceEecCCcccc
Q 028125 161 KTGQPFEKITKDLSRIK--RFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 161 ~tg~~~~~i~~~~~~~~--~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
. +......+++-.+. .++++||+++||||+|...++..
T Consensus 164 ~--vG~~~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~~~~l~ 203 (274)
T 3tlf_A 164 V--LPRSIALRMALMGKHERMSAQRAYELGLISEIVEHDRLL 203 (274)
T ss_dssp T--SCHHHHHHHHHHGGGCCEEHHHHHHHTSSSEEECGGGHH
T ss_pred H--hCHHHHHHHHHcCCCCccCHHHHHHCCCCCeecCHHHHH
Confidence 1 22334444443356 79999999999999999876543
No 83
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=98.70 E-value=2.6e-07 Score=81.27 Aligned_cols=148 Identities=14% Similarity=0.141 Sum_probs=102.2
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe-----CCCCChhH------------------HHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN-----GPGGDVTP------------------TLAIYD 83 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN-----SpGG~v~~------------------~~~I~~ 83 (213)
.+|+|+-| ++.++...+.+.+..++.++..+.|+|.=+ |-||++.. ...++.
T Consensus 20 a~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (353)
T 4hdt_A 20 GLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADGAEARRFWFDEYRLNA 99 (353)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchhhHHHHHHHHHHHHHHH
Confidence 45667654 667778889999998888777777777533 33566532 234667
Q ss_pred HHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028125 84 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTG 163 (213)
Q Consensus 84 ~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg 163 (213)
.|..+++||++.+.|.|..+|.-++++||- |++.++++|.+-....+..-..-- ...+ .+.-|
T Consensus 100 ~i~~~~kPvIAav~G~a~GgG~~lal~cD~--ria~~~a~f~~pe~~iGl~p~~g~-------~~~l--------~rl~g 162 (353)
T 4hdt_A 100 HIGRYPKPYVSIMDGIVMGGGVGVGAHGNV--RVVTDTTKMAMPEVGIGFIPDVGG-------TYLL--------SRAPG 162 (353)
T ss_dssp HHHHCSSCEEEEECBEEETHHHHHHTTSSE--EEECTTCEEECCGGGGTCCCCTTH-------HHHH--------HTSST
T ss_pred HHHHCCCCEEEEeECceeecCccccCCcCe--eccchhccccCcccccccCCCccc-------eehh--------hhhhh
Confidence 788999999999999999999999999998 999999999875544332111100 0011 11112
Q ss_pred CCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 164 QPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 164 ~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
. ...+++-.+..++++||+++||||+|...++.
T Consensus 163 -~--~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l 195 (353)
T 4hdt_A 163 -K--LGLHAALTGAPFSGADAIVMGFADHYVPHDKI 195 (353)
T ss_dssp -T--HHHHHHHHCCCBCHHHHHHHTSCSEECCGGGH
T ss_pred -H--HHHHHHhcCCCCCHHHHHHcCCCcEEeCHHHH
Confidence 1 22223323567999999999999999987764
No 84
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=98.68 E-value=2.2e-07 Score=78.59 Aligned_cols=145 Identities=15% Similarity=0.034 Sum_probs=98.4
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH-----------------HHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP-----------------TLAIYDTM 85 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~-----------------~~~I~~~i 85 (213)
.+|+|+-+ ++.++...+.+.+..++.+ +.+.|+|.=. |-|+++.. ...++..|
T Consensus 18 ~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l 96 (267)
T 3hp0_A 18 CYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGRKQASSQEPLYDLWMKL 96 (267)
T ss_dssp EEEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTCCSCCCCHHHHHHHHHH
T ss_pred EEEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChHHHHHHHHHHHHHHHHH
Confidence 45667654 6777788888888888764 4555544311 22344422 23567788
Q ss_pred HhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 028125 86 QSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQP 165 (213)
Q Consensus 86 ~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~ 165 (213)
..+++||++.+.|.|..+|.-++++||- |++.++++|.+-....+..-.. ... .+. + . +.
T Consensus 97 ~~~~kPvIAav~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~Gl~p~~---g~~--~l~---r--------~--vG 156 (267)
T 3hp0_A 97 QTGPYVTISHVRGKVNAGGLGFVSATDI--AIADQTASFSLSELLFGLYPAC---VLP--FLI---R--------R--IG 156 (267)
T ss_dssp HHSSSEEEEEECSEEETTHHHHHHHSSE--EEECTTCEEECCGGGGTCCCTT---THH--HHH---H--------H--HC
T ss_pred HcCCCCEEEEECCEEeehHHHHHHhCCE--EEEcCCCEEECchhccCcCchh---HHH--HHH---H--------H--hC
Confidence 8899999999999999999999999998 9999999998765544322110 000 111 1 1 12
Q ss_pred HHHHHHHhcCCceeCHHHHHHcCCceEecCCc
Q 028125 166 FEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 197 (213)
Q Consensus 166 ~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~ 197 (213)
.....+++-.+..++++||+++||||+|....
T Consensus 157 ~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~ 188 (267)
T 3hp0_A 157 RQKAHYMTLMTKPISVQEASEWGLIDAFDAES 188 (267)
T ss_dssp HHHHHHHHHHCCCBCHHHHHHHTSSSCBCSCT
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCcceecCCH
Confidence 34444555446789999999999999998653
No 85
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=98.67 E-value=3e-07 Score=81.05 Aligned_cols=148 Identities=14% Similarity=0.085 Sum_probs=102.4
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe-----CCCCChhHH------------------HHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN-----GPGGDVTPT------------------LAIYD 83 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN-----SpGG~v~~~------------------~~I~~ 83 (213)
.+|+|+-+ ++.++...+.+.+..++.++..+.|+|.=+ |-|+++..- ..+..
T Consensus 17 ~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (363)
T 3bpt_A 17 GVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNN 96 (363)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCCHHHHHHHHHHHHH
T ss_pred EEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccHHHHHHHHHHHHHHH
Confidence 45777654 566777888888888887777777766543 246665321 13446
Q ss_pred HHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028125 84 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTG 163 (213)
Q Consensus 84 ~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg 163 (213)
.|..+++||++.+.|.|..+|.-++++||- |++.++++|.+.....+..-..-- ...+ .+..|
T Consensus 97 ~l~~~~kPvIAav~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~L--------~r~~g 159 (363)
T 3bpt_A 97 AVGSCQKPYVALIHGITMGGGVGLSVHGQF--RVATEKCLFAMPETAIGLFPDVGG-------GYFL--------PRLQG 159 (363)
T ss_dssp HHHTCSSCEEEEECSEEETHHHHTTTTSSE--EEECTTCEEECCGGGTTSCCCTTH-------HHHH--------HHSST
T ss_pred HHHhCCCCEEEEECCEEehHHHHHHHhCCE--EEEcCCeEEeCCccccCCCCCchH-------HHHH--------HHhhH
Confidence 788899999999999999999999999998 999999999876555442211100 0011 11123
Q ss_pred CCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 164 QPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 164 ~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
. ...+++-.++.++++||+++||||+|....+.
T Consensus 160 ~---~a~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l 192 (363)
T 3bpt_A 160 K---LGYFLALTGFRLKGRDVYRAGIATHFVDSEKL 192 (363)
T ss_dssp T---HHHHHHHHCCCEETHHHHHTTSCSEECCGGGH
T ss_pred H---HHHHHHHcCCCCCHHHHHHCCCcceecCHHHH
Confidence 2 23334334678999999999999999987664
No 86
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=98.65 E-value=1.2e-07 Score=84.99 Aligned_cols=150 Identities=17% Similarity=0.106 Sum_probs=103.0
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCC-----CCChhHH----------------------H
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGP-----GGDVTPT----------------------L 79 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSp-----GG~v~~~----------------------~ 79 (213)
.+|+|+-+ ++.++...+.+.+..++.++.++.|+|.=..+ ||++... .
T Consensus 53 ~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (407)
T 3ju1_A 53 GVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQVTEVAKVFFEEEY 132 (407)
T ss_dssp EEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSCCHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhcccccccccHHHHHHHHHHHH
Confidence 45777665 56677888888888887776666666654443 6665321 1
Q ss_pred HHHHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 028125 80 AIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELS 159 (213)
Q Consensus 80 ~I~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a 159 (213)
.++..|..+++||++.+.|.|..+|.-++++||. |++.++++|.+-....+..-..-- ... +.
T Consensus 133 ~l~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~--ria~~~a~f~~pe~~lGl~P~~G~-------t~~--------L~ 195 (407)
T 3ju1_A 133 RLDYLLHTYGKPVLVWGDGIVMGGGLGLMAGASH--KVVTETSRIAMPEVTIGLYPDVGG-------SYF--------LN 195 (407)
T ss_dssp HHHHHHHTCSSCEEEECCSEEETHHHHHHHHCSE--EEECTTCEEECGGGGGTCCSCTTH-------HHH--------TT
T ss_pred HHHHHHHHCCCCEEEEECCccccCcchHHhcCCE--EEEcCCCEEeChHhhcCCCCCchH-------HHH--------Hh
Confidence 2456788899999999999999999999999998 999999999875554432111000 000 11
Q ss_pred HHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccccc
Q 028125 160 RKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 201 (213)
Q Consensus 160 ~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~~ 201 (213)
+..| ....+++-.++.++|+||+++||||+|...++..+
T Consensus 196 rl~g---~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~ 234 (407)
T 3ju1_A 196 RMPG---KMGLFLGLTAYHMNAADACYVGLADHYLNRDDKEL 234 (407)
T ss_dssp TSST---THHHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHH
T ss_pred hhhH---HHHHHHHHcCCcCcHHHHHHCCCccEEcCHHHHHH
Confidence 1122 22333443467799999999999999998776443
No 87
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=98.61 E-value=5.3e-07 Score=77.67 Aligned_cols=142 Identities=11% Similarity=-0.008 Sum_probs=93.2
Q ss_pred cCcchHHHHHHHHHhhccC-----CCCCceEEEEe----CCCCChhHHH----------------HHHHHHH------hc
Q 028125 40 IDEEFSNQILATMLYLDSV-----DDSKRVYMYIN----GPGGDVTPTL----------------AIYDTMQ------SL 88 (213)
Q Consensus 40 I~~~~~~~l~~~l~~l~~~-----~~~~~I~l~IN----SpGG~v~~~~----------------~I~~~i~------~~ 88 (213)
++.++...+.+.+..++.+ +..+.|+|.=. |-|+++..-. .+++.+. .+
T Consensus 60 l~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 139 (305)
T 3m6n_A 60 FSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRARLLDYAQRCVRGVHAFHVGLGA 139 (305)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTGGGT
T ss_pred CCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHHhccccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7888888888888887653 45666555321 2345543211 2223333 35
Q ss_pred CCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Q 028125 89 KSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEK 168 (213)
Q Consensus 89 ~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~ 168 (213)
++||++.+.|.|..+|.-++++||. |++.+++.|.+-....+..-..-- ...+ .+. +....
T Consensus 140 ~kPvIAaV~G~a~GgG~~LalacD~--ria~~~a~f~~pe~~~Gl~p~~g~-------~~~L--------~r~--vG~~~ 200 (305)
T 3m6n_A 140 RAHSIALVQGNALGGGFEAALSCHT--IIAEEGVMMGLPEVLFDLFPGMGA-------YSFM--------CQR--ISAHL 200 (305)
T ss_dssp TCEEEEEECSCEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCCSSH-------HHHH--------TTT--SCHHH
T ss_pred CCCEEEEECCEeehHHHHHHHhCCE--EEEcCCCEEECchhccCcCCCccH-------HHHH--------HHH--hcHHH
Confidence 8999999999999999999999998 999999999865544332111000 0011 111 23344
Q ss_pred HHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 169 ITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 169 i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
..+++-.+..++|+||+++||||+|...++..
T Consensus 201 A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~ 232 (305)
T 3m6n_A 201 AQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGV 232 (305)
T ss_dssp HHHHHHHCCEEEHHHHHHHTSCSEEECTTCHH
T ss_pred HHHHHHcCCCCCHHHHHHCCCCCEecChhHHH
Confidence 44555446789999999999999999876643
No 88
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.60 E-value=6.6e-07 Score=85.33 Aligned_cols=145 Identities=14% Similarity=0.134 Sum_probs=99.9
Q ss_pred cEEEEccc------cCcchHHHHHHHHHhhccCCCCCceEEEE----eCCCCChhH------------------HHHHHH
Q 028125 32 RVIFIGQN------IDEEFSNQILATMLYLDSVDDSKRVYMYI----NGPGGDVTP------------------TLAIYD 83 (213)
Q Consensus 32 ~iI~i~G~------I~~~~~~~l~~~l~~l~~~~~~~~I~l~I----NSpGG~v~~------------------~~~I~~ 83 (213)
.+|+|+-+ ++.++...+.+.+..++.++..+.|+|.= =|-|+++.. ...+++
T Consensus 18 a~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltgg~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (715)
T 1wdk_A 18 VELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFS 97 (715)
T ss_dssp EEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSSBBCCCHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCeEeCCcCHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence 45777665 34556778888888887777677776653 122444421 124567
Q ss_pred HHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHH
Q 028125 84 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSR 160 (213)
Q Consensus 84 ~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~ 160 (213)
.|..+++||++.+.|.|..+|.-++++||. |++.+++.|.+-....+. .|-.. .+-+.
T Consensus 98 ~l~~~~kPvIAav~G~a~GgG~elalacD~--ria~~~a~fglpev~lGl~P~~ggt~----------~L~r~------- 158 (715)
T 1wdk_A 98 DFEDLNVPTVAAINGIALGGGLEMCLAADF--RVMADSAKIGLPEVKLGIYPGFGGTV----------RLPRL------- 158 (715)
T ss_dssp HHHTCSSCEEEEECSCEETHHHHHHHTSSE--EEEETTCEEECGGGGGTCCCCSSHHH----------HHHHH-------
T ss_pred HHHhCCCCEEEEECCEeeHHHHHHHHHCCE--EEEeCCCEEeChhhccCCCCCccHHH----------HHHHH-------
Confidence 788889999999999999999999999998 999999998765554432 11111 11111
Q ss_pred HhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 161 KTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 161 ~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
.| .....+++-.++.++++||+++||||+|...++
T Consensus 159 -vG--~~~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 193 (715)
T 1wdk_A 159 -IG--VDNAVEWIASGKENRAEDALKVSAVDAVVTADK 193 (715)
T ss_dssp -HC--HHHHHHHHHHCCCEEHHHHHHTTSSSEEECGGG
T ss_pred -hC--HHHHHHHHHcCCCCCHHHHHHCCCceEEeChHH
Confidence 12 233344444467899999999999999987554
No 89
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.52 E-value=1.5e-06 Score=83.25 Aligned_cols=146 Identities=17% Similarity=0.174 Sum_probs=103.6
Q ss_pred CcEEEEccc----cCcchHHHHHHHHHhhccCCCCCceEEEEeCCCC------Ch---------hHHHHHHHHHHhcCCC
Q 028125 31 ERVIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGG------DV---------TPTLAIYDTMQSLKSP 91 (213)
Q Consensus 31 ~~iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG------~v---------~~~~~I~~~i~~~~~~ 91 (213)
..+|+|+-| ++.++...+.+.+..++.+++.+.|+|. +-|+ ++ .....+++.|..+++|
T Consensus 31 Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVlt--g~g~~F~aGaDl~~~~~~~~~~~~~~~~~~i~~~~kP 108 (742)
T 3zwc_A 31 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVIC--GANGNFCAGADIHGFSAFTPGLALGSLVDEIQRYQKP 108 (742)
T ss_dssp EEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEE--ESTTCSBCCBCSSSCCSSCSCSHHHHHHHHHHHCSSC
T ss_pred EEEEEeCCCcccCCCHHHHHHHHHHHHHHhhCCCCeEEEEE--CCCCccccCcChHhhhccChhHHHHHHHHHHHhCCCC
Confidence 356777766 6667788888889888877777766653 3332 22 2345788999999999
Q ss_pred eEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCC-CChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Q 028125 92 VGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKIT 170 (213)
Q Consensus 92 v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~-G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~ 170 (213)
|++.+.|.|..+|.-++++||. |++.+++.|.+-....+.. |--. ...+-+. . ......
T Consensus 109 vIAai~G~a~GGG~elalacD~--ria~~~a~fg~pev~lGl~Pg~gg--------t~rL~rl--------v--G~~~A~ 168 (742)
T 3zwc_A 109 VLAAIQGVALGGGLELALGCHY--RIANAKARVGLPEVTLGILPGARG--------TQLLPRV--------V--GVPVAL 168 (742)
T ss_dssp EEEEECSEEETHHHHHHHTSSE--EEEETTCEEECGGGGGTCCCTTTH--------HHHHHHH--------H--CHHHHH
T ss_pred EEEEECccchHHHHHHHHhcCE--EEEcCCCEEECcccCcccCCCccH--------HHHHHHh--------h--hHHHHH
Confidence 9999999999999999999998 9999999998655444321 1110 0111111 1 223334
Q ss_pred HHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 171 KDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 171 ~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
+++-.++.++++||+++||||+|...+.
T Consensus 169 ~l~ltG~~i~a~eA~~~GLv~~vv~~d~ 196 (742)
T 3zwc_A 169 DLITSGKYLSADEALRLGILDAVVKSDP 196 (742)
T ss_dssp HHHHHCCCEEHHHHHHHTSCSEEESSCH
T ss_pred HHHHcCCchhHHHHHHcCCccEecCchh
Confidence 4444468899999999999999987653
No 90
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=98.51 E-value=7e-07 Score=82.65 Aligned_cols=90 Identities=19% Similarity=0.157 Sum_probs=75.1
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEEccccchHHHHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I 107 (213)
|.++.+.+......+...+. ..-+|+..+|+|| |-+..+-.+..++....+|+++++.|.|+|+|++.
T Consensus 361 G~l~~~~a~Kaar~i~~a~~--~~iPlv~lvDt~Gf~~G~~~E~~Gi~~~ga~~l~a~~~~~VP~isvI~g~~~Ggg~~a 438 (548)
T 2bzr_A 361 GCLDINASEKAARFVRTCDC--FNIPIVMLVDVPGFLPGTDQEYNGIIRRGAKLLYAYGEATVPKITVITRKAYGGAYCV 438 (548)
T ss_dssp GCBCHHHHHHHHHHHHHHHH--TTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHh--cCCCEEEEeeccCCCCChHHHHhhHHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHH
Confidence 56777777777776654433 3569999999999 88899999999999999999999999999999998
Q ss_pred Hhc----CCCCcEeeccCCeEEEeCCCc
Q 028125 108 LAG----GEKGNRSAMPLSRIALDSPAG 131 (213)
Q Consensus 108 ~~a----g~~~~r~~~p~s~i~iH~p~~ 131 (213)
+++ +|. .+|.|++.+.+..|..
T Consensus 439 m~~~~~~~d~--~~awp~a~i~Vmgpeg 464 (548)
T 2bzr_A 439 MGSKDMGCDV--NLAWPTAQIAVMGASG 464 (548)
T ss_dssp TTCGGGTCSE--EEECTTCEEESSCHHH
T ss_pred hccccCCCCE--EEEcCCCEEEecCHHH
Confidence 876 665 8999999998777753
No 91
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=98.47 E-value=6.9e-07 Score=80.64 Aligned_cols=147 Identities=14% Similarity=0.072 Sum_probs=97.9
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEe-------------CCCCChhHHH--------------
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYIN-------------GPGGDVTPTL-------------- 79 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN-------------SpGG~v~~~~-------------- 79 (213)
.+|+|+-+ ++.++...+.+.+..++.+++++.|+|.=+ |-|+++....
T Consensus 178 a~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~~~~~~~~~~~~~ 257 (440)
T 2np9_A 178 ARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQGGISLVDFLMRRE 257 (440)
T ss_dssp EEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTTCCCTTTTHHHHH
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhccCcchhhhhhHHH
Confidence 44667654 566678888888888887777777777653 2244443210
Q ss_pred --HHHHHH---------------HhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHH
Q 028125 80 --AIYDTM---------------QSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 142 (213)
Q Consensus 80 --~I~~~i---------------~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~ 142 (213)
.+.+.+ ..+++||++.|.|.|..+|.-++++||. |++.+++.|.+.....+..-.. ..
T Consensus 258 ~~~~~~~~~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDi--rIAae~A~Fglpev~lGl~P~~---g~ 332 (440)
T 2np9_A 258 LGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDR--VLASSDAYFSLPAAKEGIIPGA---AN 332 (440)
T ss_dssp HTHHHHHHHCEECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSE--EEEETTCEEECCCTTTCCCCTT---HH
T ss_pred HHHHHHHHHHHHhhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCE--EEEcCCCEEECchhccCcCcch---HH
Confidence 012222 2567999999999999999999999998 9999999998766655432111 10
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 143 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 143 ~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
. .+.+ . .| .....+++-.+..|+++||+++||||+|...++
T Consensus 333 -~-~L~r---l--------vG--~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~~e 373 (440)
T 2np9_A 333 -L-RLGR---F--------AG--PRVSRQVILEGRRIWAKEPEARLLVDEVVEPDE 373 (440)
T ss_dssp -H-HHHH---H--------HH--HHHHHHHHHHCCCEETTSGGGGGTCSEEECHHH
T ss_pred -H-HHHH---H--------hh--HHHHHHHHHcCCCCCHHHHHHCCCCcEecChHH
Confidence 0 1111 1 11 123344444467899999999999999987654
No 92
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.41 E-value=5.1e-07 Score=86.28 Aligned_cols=145 Identities=19% Similarity=0.175 Sum_probs=96.5
Q ss_pred cEEEEccc----cCcchHHHHHHHHHhhccCCCCCceEEEE----eCCCCChhHH------------------HHHHHHH
Q 028125 32 RVIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYMYI----NGPGGDVTPT------------------LAIYDTM 85 (213)
Q Consensus 32 ~iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l~I----NSpGG~v~~~------------------~~I~~~i 85 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.= =|-|+++..- ..+++.|
T Consensus 19 a~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltgg~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l 98 (725)
T 2wtb_A 19 AVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGGFDISGFGEMQKGNVKEPKAGYISIDIITDLL 98 (725)
T ss_dssp EEEEEECTTTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEESSSCCBCSSCC------------CCSSSHHHHHCCCCCC
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhcccchhhhhHHHHHHHHHHHHHHH
Confidence 45777766 44556778888888887776677776653 2334554321 1122344
Q ss_pred HhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028125 86 QSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRKT 162 (213)
Q Consensus 86 ~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~t 162 (213)
..+++||++.+.|.|..+|.-++++||. |++.+++.|.+-....+. .|-.. .+-+. .
T Consensus 99 ~~~~kPvIAav~G~a~GgG~elalacD~--ria~~~a~fglpev~lGl~P~~Ggt~----------~L~rl--------v 158 (725)
T 2wtb_A 99 EAARKPSVAAIDGLALGGGLELAMACHA--RISAPAAQLGLPELQLGVIPGFGGTQ----------RLPRL--------V 158 (725)
T ss_dssp CTSSSCEEEEECSEEETHHHHHHHHSSE--EEECTTCEEECCGGGGTCCCCSSHHH----------HHHHH--------H
T ss_pred HhCcCcEEEEECCccCcccHHHHHhCCE--EEEcCCCEEeCchhccCCCCCccHHH----------HHHHh--------c
Confidence 5567899999999999999999999998 999999998765554432 11111 11111 1
Q ss_pred CCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 163 GQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 163 g~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
| .....+++-.++.++++||+++||||+|...++
T Consensus 159 G--~~~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~ 192 (725)
T 2wtb_A 159 G--LTKALEMILTSKPVKAEEGHSLGLIDAVVPPAE 192 (725)
T ss_dssp C--HHHHHHHHHHCCCEEHHHHHHHTSCSEECCTTT
T ss_pred C--HHHHHHHHHcCCCCCHHHHHHCCccceEcChhH
Confidence 2 233344444467899999999999999997654
No 93
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=98.33 E-value=1.6e-06 Score=79.91 Aligned_cols=137 Identities=19% Similarity=0.206 Sum_probs=90.5
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCC----------hhHHHHHHHHHHhcCCCeEEEEccccchHHHHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD----------VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~----------v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I 107 (213)
|.++++.+......+...+. ..-+|+..+|+||-. +..+-.+..++...++|+++++.|.|+|+|++.
T Consensus 344 G~~~~~~~~Kaar~i~~a~~--~~~Plv~lvDtpG~~~G~~~E~~g~~~~~A~~~~a~~~~~vP~isvI~g~~~gGg~~a 421 (527)
T 1vrg_A 344 GVLDIDSSDKAARFIRFLDA--FNIPILTFVDTPGYLPGVAQEHGGIIRHGAKLLYAYSEATVPKITVILRKAYGGAYIA 421 (527)
T ss_dssp GCBCHHHHHHHHHHHHHHHH--TTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhh--cCCCeEEEecCCCCcCchhhHHhHHHHHHHHHHHHHhcCCCCEEEEEeCCcccHHHHH
Confidence 56677777777666654432 366999999999944 455567777888889999999999999999988
Q ss_pred Hhc----CCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH----HHHHhcCCcee
Q 028125 108 LAG----GEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEK----ITKDLSRIKRF 179 (213)
Q Consensus 108 ~~a----g~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~----i~~~~~~~~~~ 179 (213)
+++ +|. .+|.|++.+.+-.|... ..+. +.+++.+. -++++ +.+... +...
T Consensus 422 m~~~~~~~d~--~~a~p~a~~~Vm~pega-----a~Il-~r~~~~~~-------------~d~~~~~~~~~~~y~-~~~~ 479 (527)
T 1vrg_A 422 MGSKHLGADM--VLAWPSAEIAVMGPEGA-----ANII-FKREIEAS-------------SNPEETRRKLIEEYK-QQFA 479 (527)
T ss_dssp TTCGGGTCSE--EEECTTCEEESSCHHHH-----HHHH-THHHHHHS-------------SCHHHHHHHHHHHHH-HHTS
T ss_pred hcCCCCCCCE--EEEcCCCeEEecCHHHH-----HHHH-hhhhhhcc-------------cCHHHHHHHHHHHHH-HhhC
Confidence 876 666 89999999875554321 0000 00000000 01111 111111 2335
Q ss_pred CHHHHHHcCCceEecCCcc
Q 028125 180 GSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 180 sa~EA~~~GLiD~I~~~~~ 198 (213)
++..+.+.|+||.|+.+.+
T Consensus 480 ~p~~~~~~g~iD~II~p~~ 498 (527)
T 1vrg_A 480 NPYIAASRGYVDMVIDPRE 498 (527)
T ss_dssp SHHHHHHTTSSSEECCGGG
T ss_pred CHHHHHHcCCCCeeeCHHH
Confidence 7888999999999999654
No 94
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=98.29 E-value=1.6e-06 Score=79.87 Aligned_cols=137 Identities=17% Similarity=0.157 Sum_probs=92.4
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEEccccchHHHHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I 107 (213)
|.++.+.+......+...+. ..-+|+..+|+|| |-+..+-.+..++....+|+++++.|.++|+|++.
T Consensus 340 G~~~~~~a~Kaar~i~~~~~--~~iPlv~lvDtpGf~~G~~~E~~Gi~~~~A~~l~a~a~~~vP~itvI~g~~~Ggg~~a 417 (523)
T 1on3_A 340 GCLDINASDKAAEFVNFCDS--FNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGSYLA 417 (523)
T ss_dssp GCBCHHHHHHHHHHHHHHHH--TTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHh--cCCCeEEEEeCCCcCcchHHHHhhHHHHHHHHHHHHhcCCCCEEEEEeCCcccHHHHH
Confidence 66777777776666654433 3669999999999 55677778888889999999999999999999998
Q ss_pred Hhc----CCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH----HHHHhcCCcee
Q 028125 108 LAG----GEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEK----ITKDLSRIKRF 179 (213)
Q Consensus 108 ~~a----g~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~----i~~~~~~~~~~ 179 (213)
++. +|. .+|.|++.+.+-.|... ..+. +.+++.+. -++++ +.+.+. +...
T Consensus 418 m~~~~~~~d~--~~a~p~a~~~Vm~pega-----a~Il-~r~~~~~~-------------~d~~~~~~~~~~~y~-~~~~ 475 (523)
T 1on3_A 418 MCNRDLGADA--VYAWPSAEIAVMGAEGA-----ANVI-FRKEIKAA-------------DDPDAMRAEKIEEYQ-NAFN 475 (523)
T ss_dssp TTCGGGTCSE--EEECTTCEEESSCHHHH-----HHHH-THHHHHHS-------------SCHHHHHHHHHHHHH-HHHS
T ss_pred hcccCCCCCE--EEEcCCCeEEecCHHHH-----HHHH-hhhhhhcc-------------cCHHHHHHHHHHHHH-HhhC
Confidence 887 666 89999999875554321 0000 00000000 01111 111111 2335
Q ss_pred CHHHHHHcCCceEecCCcc
Q 028125 180 GSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 180 sa~EA~~~GLiD~I~~~~~ 198 (213)
++..+.+.|+||.|+.+.+
T Consensus 476 ~p~~~a~~g~iD~II~p~~ 494 (523)
T 1on3_A 476 TPYVAAARGQVDDVIDPAD 494 (523)
T ss_dssp SHHHHHHTTSSSEECCGGG
T ss_pred CHHHHHhcCCCCEeeCHHH
Confidence 7888999999999999754
No 95
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=98.26 E-value=1.5e-06 Score=74.87 Aligned_cols=124 Identities=13% Similarity=0.104 Sum_probs=85.6
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHH-------HHHHHHHHhc---CCCeEEEEccccchHHHHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPT-------LAIYDTMQSL---KSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~-------~~I~~~i~~~---~~~v~t~~~G~aaSaa~~I 107 (213)
|.++....+.+.+.+..+.+. .-++++..+|+|+.+..+ -.|...+..+ ++|+++++.|.|+.+|++.
T Consensus 132 gslg~~~~~Ki~r~~e~A~~~--~~PvI~l~~sGGarlqeg~~~l~~~~~i~~al~~~~~~~vP~IavV~G~~~GGg~a~ 209 (304)
T 2f9y_B 132 GSMGSVVGARFVRAVEQALED--NCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSAS 209 (304)
T ss_dssp TCBCTHHHHHHHHHHHHHHHH--TCCEEEEEEESSBCGGGTHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHhC--CCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCccHHHHH
Confidence 334445567777777766554 457888899999998443 3455666554 7999999999988888555
Q ss_pred -HhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHHHH
Q 028125 108 -LAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 186 (213)
Q Consensus 108 -~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~ 186 (213)
+++||. ++|.|++.+.+-.|.. + .+.+|.. +. +...+++++.+
T Consensus 210 ~a~~~D~--via~~~A~i~v~Gp~~---------------i-----------~~~ig~~-------l~-~~~~~Ae~~~~ 253 (304)
T 2f9y_B 210 FAMLGDL--NIAEPKALIGFAGPRV---------------I-----------EQTVREK-------LP-PGFQRSEFLIE 253 (304)
T ss_dssp GGGCCSE--EEECTTCBEESSCHHH---------------H-----------HHHHTSC-------CC-TTTTBHHHHGG
T ss_pred HHhcCCE--EEEeCCcEEEeecHHH---------------H-----------HHHhCcc-------CC-cccCCHHHHHh
Confidence 678888 9999999987542111 0 1111221 22 23469999999
Q ss_pred cCCceEecCCccc
Q 028125 187 YGLIDRIIRPPRI 199 (213)
Q Consensus 187 ~GLiD~I~~~~~~ 199 (213)
.|+||.|....+.
T Consensus 254 ~Glvd~Vv~~~el 266 (304)
T 2f9y_B 254 KGAIDMIVRRPEM 266 (304)
T ss_dssp GTCCSEECCHHHH
T ss_pred cCCccEEeCcHHH
Confidence 9999999876543
No 96
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=98.25 E-value=4e-06 Score=78.15 Aligned_cols=145 Identities=14% Similarity=0.144 Sum_probs=96.7
Q ss_pred EEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEEccccch
Q 028125 33 VIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHCVGFAYH 102 (213)
Q Consensus 33 iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~~G~aaS 102 (213)
+....|.++++.+......+...+. ..-+|+..+|+|| |-+..+-.+..++..+.+|+++++.|.+.|
T Consensus 380 ~~~~~G~l~~~~a~Kaarfi~~c~~--~~iPlv~lvDtpGf~~G~~~E~~Gi~~~gA~~~~a~a~a~vP~itvI~g~~~G 457 (587)
T 1pix_A 380 SVGIGGKLYRQGLVKMNEFVTLCAR--DRLPIVWIQDTTGIDVGNDAEKAELLGLGQSLIYSIQTSHIPQFEITLRKGTA 457 (587)
T ss_dssp CCEETTEECHHHHHHHHHHHHHHHH--TTCCEEEEECCCEECCSHHHHHTTHHHHHHHHHHHHHTCCCCEEEEECSEEET
T ss_pred ccccCCCcCHHHHHHHHHHHHHhhc--CCCCeEEEecCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCCCcc
Confidence 4446788888888777776654433 3668999999999 456777788899999999999999999999
Q ss_pred HHHHHHhc----C--CCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-------HHH
Q 028125 103 LAGFLLAG----G--EKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF-------EKI 169 (213)
Q Consensus 103 aa~~I~~a----g--~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~-------~~i 169 (213)
+|++.+++ + +. .+|.|++.+.+-.|... ..+. +..+.... ++.|.+. +++
T Consensus 458 gg~~am~~~~~~~~~d~--~~a~p~A~~~Vm~pega-----a~Il-~r~~~~~~---------~~~g~~~~~~~~~~~~~ 520 (587)
T 1pix_A 458 AAHYVLGGPQGNDTNAF--SIGTAATEIAVMNGETA-----ATAM-YSRRLAKD---------RKAGKDLQPTIDKMNNL 520 (587)
T ss_dssp THHHHTTCTTCTTTEEE--EEECTTCEEESSCHHHH-----HHHH-HHHHHHHH---------HHTTCCCHHHHHHHHHH
T ss_pred HHHHHhcCcccCcccce--eeeccCCeEecCCHHHH-----HHHH-Hhhhhhhh---------hhcCCChHHHHHHHHHH
Confidence 99888875 4 65 89999999875554321 1110 00111110 1111111 111
Q ss_pred HHHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 170 TKDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 170 ~~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
.+.... ..++..|.+.|+||.|+++.+
T Consensus 521 ~~~y~~--~~~p~~aa~~g~iD~VI~p~~ 547 (587)
T 1pix_A 521 IQAFYT--KSRPKVCAELGLVDEIVDMNK 547 (587)
T ss_dssp HHHHHH--TTSHHHHHHHTSSSEECCTTT
T ss_pred HHHHHH--hCCHHHHHhcCCCccccCHHH
Confidence 111111 378999999999999999754
No 97
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=98.12 E-value=1.2e-05 Score=74.17 Aligned_cols=89 Identities=16% Similarity=0.121 Sum_probs=71.2
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCC----------ChhHHHHHHHHHHhcCCCeEEEEccccchHHHHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGG----------DVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG----------~v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I 107 (213)
|.++.+.+.+....+...++ ..-+|+..+|+||- -+..+-.+..++....+|+++++.|.+.|+|++.
T Consensus 352 G~l~~~~a~Kaarfi~lcd~--~~iPlv~lvDtpGf~~G~~~E~~Gi~~~gAk~l~a~a~a~VP~itvI~g~~~Ggg~~a 429 (531)
T 3n6r_B 352 GCLDIDSSRKAARFVRFCDA--FEIPLLTLIDVPGFLPGTSQEYGGVIKHGAKLLYAYGEATVPMVTVITRKAYGGAYVV 429 (531)
T ss_dssp GCBCHHHHHHHHHHHHHHHH--TTCCEEEEEEECSBCCSHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhhc--cCCCEEEEeCCCCCCCCHHHHHhhHHHHHHHHHHHHHhCCCCEEEEEcCCccchhhhh
Confidence 67777777766666654433 35689999999994 4566778888899999999999999999999998
Q ss_pred Hhc----CCCCcEeeccCCeEEEeCCC
Q 028125 108 LAG----GEKGNRSAMPLSRIALDSPA 130 (213)
Q Consensus 108 ~~a----g~~~~r~~~p~s~i~iH~p~ 130 (213)
+++ +|. .+|.|++.+.+-.|.
T Consensus 430 m~~~~~~~d~--~~awp~A~i~Vm~pe 454 (531)
T 3n6r_B 430 MSSKHLRADF--NYAWPTAEVAVMGAK 454 (531)
T ss_dssp TTCGGGTCSE--EEECTTCEEESSCHH
T ss_pred ccCccCCCCe--EEEcCCceEecCCHH
Confidence 886 666 899999999866654
No 98
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=98.11 E-value=8.5e-07 Score=81.71 Aligned_cols=89 Identities=18% Similarity=0.208 Sum_probs=74.1
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEEccccchHHHHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I 107 (213)
|.++.+.++.+...++..+. ..-+|+..+|||| |.+..+-.+...+...+.|+++++.|.|+++|++.
T Consensus 339 G~l~~~~~~K~ar~i~~a~~--~~~Plv~l~ds~G~~~G~~~E~~G~~~~~Ak~l~~~~~~~vP~Isvi~g~~~GGg~~~ 416 (522)
T 1x0u_A 339 GSIDIDAADKAARFIRFCDA--FNIPLISLVDTPGYVPGTDQEYKGIIRHGAKMLYAFAEATVPKITVIVRKSYGGAHIA 416 (522)
T ss_dssp GCBCHHHHHHHHHHHHHHHH--TTCCEEEEEEECCBCCSHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHhh--CCCCEEEEecCCCCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeCCcccHHHHH
Confidence 55666667777777765443 3569999999999 77788888889999999999999999999999999
Q ss_pred Hhc----CCCCcEeeccCCeEEEeCCC
Q 028125 108 LAG----GEKGNRSAMPLSRIALDSPA 130 (213)
Q Consensus 108 ~~a----g~~~~r~~~p~s~i~iH~p~ 130 (213)
.++ +|. .+|.|++.+.+-.|.
T Consensus 417 ~a~~a~~~D~--v~a~p~A~i~v~gpe 441 (522)
T 1x0u_A 417 MSIKSLGADL--VYAWPTAEIAVTGPE 441 (522)
T ss_dssp TCCGGGTCSE--EEECTTCEEESSCHH
T ss_pred hcccccCCCE--EEEeCCCEEEecCHH
Confidence 887 887 899999999877765
No 99
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=97.99 E-value=2.7e-05 Score=71.72 Aligned_cols=89 Identities=17% Similarity=0.145 Sum_probs=70.0
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEEccccchHHHHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I 107 (213)
|.++.+.+.+....+...++ ..-+|+..+|+|| |-+..+-.+..++....+|+++++.|.+.|+|++.
T Consensus 346 G~l~~~~a~Kaarfi~~c~~--~~iPlv~lvDtpGf~~G~~~E~~gi~~~~Ak~l~a~a~a~vP~itvI~g~~~GGa~~a 423 (530)
T 3iav_A 346 GCLDITASEKAARFVRTCDA--FNVPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITVITRKAFGGAYVV 423 (530)
T ss_dssp GCBCHHHHHHHHHHHHHHHH--TTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHh--cCCCEEEEeeCCCCCccHHHHHhhHHHHHHHHHHHHHhCCCCEEEEEeCCcchHHHHH
Confidence 67777777776666654443 2568999999998 44566667888899999999999999999988777
Q ss_pred Hhc----CCCCcEeeccCCeEEEeCCC
Q 028125 108 LAG----GEKGNRSAMPLSRIALDSPA 130 (213)
Q Consensus 108 ~~a----g~~~~r~~~p~s~i~iH~p~ 130 (213)
+++ +|. .+|.|++.+.+-.|.
T Consensus 424 m~~~~~~~d~--~~awp~a~~~Vm~~e 448 (530)
T 3iav_A 424 MGSKHLGADL--NLAWPTAQIAVMGAQ 448 (530)
T ss_dssp TTCGGGTCSE--EEECTTCEEESSCHH
T ss_pred hcCCCCCCCE--EEEcCCceEecCCHH
Confidence 665 565 899999999876654
No 100
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=97.94 E-value=1.9e-05 Score=73.53 Aligned_cols=152 Identities=10% Similarity=0.062 Sum_probs=95.8
Q ss_pred cEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEEccccc
Q 028125 32 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHCVGFAY 101 (213)
Q Consensus 32 ~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~~G~aa 101 (213)
++..+.|.++++.+.+....+...++. .-+|+..+|+|| |-+..+-.+..++..+.+|++|++.|.+.
T Consensus 381 ~~~~~~G~l~~~~a~Kaarfi~lcd~f--~iPlv~lvDtpGf~~G~~aE~~Gi~~~gAk~l~a~a~a~VP~itvI~g~~~ 458 (588)
T 3gf3_A 381 NSVGIGGKLYRQGLIKMNEFVTLCARD--RIPLIWLQDTTGIDVGDEAEKAELLGLGQSLIYSIENSKLPSLEITIRKAS 458 (588)
T ss_dssp SCEEETTEECHHHHHHHHHHHHHHHHT--TCCEEEEECCCEECCSHHHHHTTHHHHHHHHHHHHHHHCSCEEEEESSEEE
T ss_pred hhhccCCCcCHHHHHHHHHHHHHhhhc--CCCeEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCCcc
Confidence 455677888988887777666655432 568999999998 55677788999999999999999999999
Q ss_pred hHHHHHHhc---CCC-CcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHH---HHHHHHHHHhCCCHHHHHHHhc
Q 028125 102 HLAGFLLAG---GEK-GNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRD---YIFKELSRKTGQPFEKITKDLS 174 (213)
Q Consensus 102 Saa~~I~~a---g~~-~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~---~~~~~~a~~tg~~~~~i~~~~~ 174 (213)
|+|++.+++ ++. ...+|.|++.+.+-.|... ..+. +.+++....+ .....-++ .+++.+.+.
T Consensus 459 Ggg~~am~~~~~~~~~~~~~awp~A~~sVm~pEga-----a~Il-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~y~ 527 (588)
T 3gf3_A 459 AAAHYVLGGPQGNNTNVFSIGTGACEYYVMPGETA-----ANAM-YSRKLVKAKKAGEDLQPIIGK-----MNDMIQMYT 527 (588)
T ss_dssp TTHHHHTTCTTCTTTEEEEEECTTCEEESSCHHHH-----HHHH-HHHHHHHC-------CHHHHH-----HHHHHHHHH
T ss_pred HHHHHHhcccccCCccceEEECCCceEEeCCHHHH-----HHHH-hhhHHhhhhccccccchHHHH-----HHHHHHHHH
Confidence 988877765 220 1267889998875554321 0100 0111111000 00000000 011222222
Q ss_pred CCceeCHHHHHHcCCceEecCCcc
Q 028125 175 RIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 175 ~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
.. .++--|-+.|++|.|+++.+
T Consensus 528 ~~--~~p~~aA~r~~vD~VIdP~~ 549 (588)
T 3gf3_A 528 DK--SRPKYCTEKGMVDEIVDMTE 549 (588)
T ss_dssp HT--TSHHHHHHTTSSSEECCGGG
T ss_pred Hh--CCHHHHHhcCCCCeeeCHHH
Confidence 11 48899999999999999865
No 101
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=97.91 E-value=3.7e-05 Score=71.11 Aligned_cols=89 Identities=12% Similarity=0.050 Sum_probs=69.9
Q ss_pred ccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEEccccchHHHH
Q 028125 37 GQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGF 106 (213)
Q Consensus 37 ~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~ 106 (213)
+|.++.+.+......++..+.. .-+|+..+|+|| |-+..+-.+..++...++|+++++.|.+.++|++
T Consensus 365 ~G~l~~~~a~Kaarfi~~c~~~--~iPlv~lvDtpGf~~G~~~E~~Gi~~~gAk~~~a~~~a~vP~itvi~g~~~Ggg~~ 442 (555)
T 3u9r_B 365 NGILFAEAAQKGAHFIELACQR--GIPLLFLQNITGFMVGQKYEAGGIAKHGAKLVTAVACARVPKFTVLIGGSFGAGNY 442 (555)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHH--TCCEEEEEEECCBCCSHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEETTHHH
T ss_pred CCccCHHHHHHHHHHHHHHhcC--CCCEEEEecCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeCCccchhhH
Confidence 4778888777766666654432 568999999999 4466777888899999999999999999999888
Q ss_pred HHhc----CCCCcEeeccCCeEEEeCC
Q 028125 107 LLAG----GEKGNRSAMPLSRIALDSP 129 (213)
Q Consensus 107 I~~a----g~~~~r~~~p~s~i~iH~p 129 (213)
.++. +|. .+|.|++.+.+-.|
T Consensus 443 am~~~~~~~d~--~~a~p~A~i~Vmgp 467 (555)
T 3u9r_B 443 GMCGRAYDPRF--LWMWPNARIGVMGG 467 (555)
T ss_dssp HTTCGGGCCSE--EEECTTCEEESSCH
T ss_pred hhcCccCCCCe--EEEcCCcEEEcCCH
Confidence 8763 565 89999999875543
No 102
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=97.72 E-value=6.5e-05 Score=64.10 Aligned_cols=125 Identities=8% Similarity=0.049 Sum_probs=82.3
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHH-------HHHHHHh---cCCCeEEEEccccchHHHHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLA-------IYDTMQS---LKSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~-------I~~~i~~---~~~~v~t~~~G~aaSaa~~I 107 (213)
|.++....+.+...+..+.+. .-+++..++|+|....++.. +..++.. ...|+++++.|.|..++++.
T Consensus 135 Gs~g~~~~~K~~r~ie~A~~~--~lPlI~l~dsgGar~qEGi~sl~q~aki~~~l~~~s~~~vP~Isvv~g~~~GG~~as 212 (285)
T 2f9i_B 135 GSMGSVIGEKICRIIDYCTEN--RLPFILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSAS 212 (285)
T ss_dssp GCCCHHHHHHHHHHHHHHHHT--TCCEEEEEEECSCCGGGHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTT
T ss_pred CcCCHHHHHHHHHHHHHHHHc--CCCEEEEEeCCCcchhhhhhhHhHHHHHHHHHHHHHcCCCCEEEEEeCCccHHHHHH
Confidence 334444567777777655433 56899999999998766543 2333443 46899999999997777666
Q ss_pred -HhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHHHH
Q 028125 108 -LAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 186 (213)
Q Consensus 108 -~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~ 186 (213)
++.+|. .++.|++.+.+-.|... + ++ ++.+. . +-+=+++-..+
T Consensus 213 ~a~~~D~--i~a~p~A~i~~aGP~vi--------~--------------~~----~~~~~-------~-e~~~~Ae~~~~ 256 (285)
T 2f9i_B 213 FASVGDI--NLSEPKALIGFAGRRVI--------E--------------QT----INEKL-------P-DDFQTAEFLLE 256 (285)
T ss_dssp GGGCCSE--EEECTTCBEESSCHHHH--------H--------------HH----HTSCC-------C-TTTTBHHHHHH
T ss_pred hhhCCCE--EEEeCCcEEEEcCHHHH--------H--------------HH----hcccc-------h-HhHhhHHHHHh
Confidence 456666 89999999876554321 0 00 01110 1 12236888889
Q ss_pred cCCceEecCCcccc
Q 028125 187 YGLIDRIIRPPRIK 200 (213)
Q Consensus 187 ~GLiD~I~~~~~~~ 200 (213)
.|+||.|+.+++..
T Consensus 257 ~G~iD~Iv~~~e~r 270 (285)
T 2f9i_B 257 HGQLDKVVHRNDMR 270 (285)
T ss_dssp TTCCSEECCGGGHH
T ss_pred cCCccEEeChHHHH
Confidence 99999999976543
No 103
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=97.26 E-value=0.0012 Score=63.26 Aligned_cols=99 Identities=14% Similarity=0.107 Sum_probs=72.8
Q ss_pred cCcEEEE-ccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEE--
Q 028125 30 RERVIFI-GQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHC-- 96 (213)
Q Consensus 30 ~~~iI~i-~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~-- 96 (213)
++++... .|.++++.+......+...+. ..-+|+..+|+|| |-+..+-.+..++..+.+|+++++
T Consensus 453 ~e~~~~~~gG~l~~~~a~KaarfI~~cd~--f~iPlv~LvDtpGf~~G~~aE~~Gi~~~gAkll~A~a~a~VP~itvI~r 530 (793)
T 2x24_A 453 EAKIIQQAGQVWFPDSAYKTAQAIKDFNR--EKLPLMIFANWRGFSGGMKDMYDQVLKFGAYIVDGLRKYRQPVLIYIPP 530 (793)
T ss_dssp CCEEEEECTTEECHHHHHHHHHHHHHHHT--TTCCEEEECCBCEECCSHHHHHTTHHHHHHHHHHHHHTCCSCEEEEECT
T ss_pred hhhhhhhcCCcccHHHHHHHHHHHHHhcc--CCCCEEEEecCCCCCCCHHHHHhhHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 3445544 588999988887777765543 3669999999999 556778889999999999999999
Q ss_pred ccccchHHHHHHhcCCCC--c--EeeccCCeEEEeCCCc
Q 028125 97 VGFAYHLAGFLLAGGEKG--N--RSAMPLSRIALDSPAG 131 (213)
Q Consensus 97 ~G~aaSaa~~I~~ag~~~--~--r~~~p~s~i~iH~p~~ 131 (213)
.|.+.+ |++++++..-+ . .+|.|++.+.+-.|..
T Consensus 531 ~Ge~~G-Ga~~~~~~~~~~d~~ev~Awp~A~~~VM~pEg 568 (793)
T 2x24_A 531 YAEVRG-GSWAVMDTSINPLCIEMYADRESRASVLEPEG 568 (793)
T ss_dssp TCEEEH-HHHHTTCGGGSTTTEEEEEETTCEEESSCHHH
T ss_pred CCcccc-hhHHhhhcccCccHHHHhhhccCEEEecCHHH
Confidence 788765 55555532211 2 3899999998666543
No 104
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=96.22 E-value=0.011 Score=56.29 Aligned_cols=99 Identities=14% Similarity=0.049 Sum_probs=72.3
Q ss_pred cCcEEEE-ccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEEc-
Q 028125 30 RERVIFI-GQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHCV- 97 (213)
Q Consensus 30 ~~~iI~i-~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~~- 97 (213)
.+++... .|.++++.+......+...++ ...-+|...+|+|| |-+..+-.+..++..+..|++|++.
T Consensus 438 ~e~~~~~~gG~l~pe~a~KaArfI~lcd~-~f~iPLv~LvDtpGf~~G~~aE~~Gi~k~gAkll~A~a~a~VP~itVI~R 516 (758)
T 3k8x_A 438 AETLIQEPGQVWHPNSAFKTAQAINDFNN-GEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPP 516 (758)
T ss_dssp CCEEEEECTTEECHHHHHHHHHHHHHHHH-TSCCCEEECCCCCEECCSHHHHHTTHHHHHHHHHHHHHTCCSCEEEEECT
T ss_pred hhhHHhhcCCCCCHHHHHHHHHHHHHhhh-ccCCCEEEEecCCCCCCCHHHHHccHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 3444444 488999888877766665543 13568999999998 5567788899999999999999999
Q ss_pred -cccchHHHHHHhcCC--CCc--EeeccCCeEEEeCCC
Q 028125 98 -GFAYHLAGFLLAGGE--KGN--RSAMPLSRIALDSPA 130 (213)
Q Consensus 98 -G~aaSaa~~I~~ag~--~~~--r~~~p~s~i~iH~p~ 130 (213)
|.+.++|+ +++++. .+. .+|.|++.+.+-.|.
T Consensus 517 kGe~~GGA~-~am~~~~~ad~~~v~Awp~A~isVM~pE 553 (758)
T 3k8x_A 517 TGELRGGSW-VVVDPTINADQMEMYADVNARAGVLEPQ 553 (758)
T ss_dssp TCEEETHHH-HTTCGGGSTTTEEEEEETTCEEESSCHH
T ss_pred CCccchHHH-HHhCcccCCCHHHHhcCCCCEEEccCHH
Confidence 89877666 444421 122 799999998766554
No 105
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=95.05 E-value=0.045 Score=50.90 Aligned_cols=90 Identities=10% Similarity=0.021 Sum_probs=63.6
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChh--HH---------HHHHHHHH--hcCCCeEEEEccccchHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT--PT---------LAIYDTMQ--SLKSPVGTHCVGFAYHLA 104 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~--~~---------~~I~~~i~--~~~~~v~t~~~G~aaSaa 104 (213)
|.+.+...++++..+..+.+. .-+++..++|+|..+. ++ ...++..+ ....|+++++.|.|++++
T Consensus 120 GS~g~~~~~Ki~Ra~e~A~~~--~lPvI~l~dSgGArl~~qe~~~~~l~~~g~if~~~~~ls~~~iP~Isvv~Gp~~gGg 197 (588)
T 3gf3_A 120 GAWVPGQAENLIRCSDAAKMM--HLPLIYLLNCSGVEFPNQDKVYPNRRGGGTPFFRNSELNQLGIPVIVGIYGTNPAGG 197 (588)
T ss_dssp GCBCTTHHHHHHHHHHHHHHH--TCCEEEEECCCCBCGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECSEEETHH
T ss_pred CCCCHHHHHHHHHHHHHHHHc--CCCEEEEEcCCCcCcccccccccchhhHHHHHHHHHHHhcCCCCEEEEEeCCCCchh
Confidence 445555677888777654433 4589999999998873 21 11233222 335899999999999999
Q ss_pred HHHHhcCCCCcEeeccCCeEEEeCCCc
Q 028125 105 GFLLAGGEKGNRSAMPLSRIALDSPAG 131 (213)
Q Consensus 105 ~~I~~ag~~~~r~~~p~s~i~iH~p~~ 131 (213)
+|.+++++. .++.|++.+.+-.|..
T Consensus 198 Ay~a~~~~v--im~~~~a~i~~aGP~v 222 (588)
T 3gf3_A 198 GYHSISPTI--LIAHQDANMAVGGAGI 222 (588)
T ss_dssp HHHHHSSSE--EEEETTCEEESSCCC-
T ss_pred hhHhhCCeE--EEEECCcEEEecChhh
Confidence 888777775 7788899998877753
No 106
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=94.71 E-value=0.099 Score=48.63 Aligned_cols=88 Identities=10% Similarity=0.051 Sum_probs=63.5
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHH----------H---HHHHhcCCCeEEEEccccchHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAI----------Y---DTMQSLKSPVGTHCVGFAYHLA 104 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I----------~---~~i~~~~~~v~t~~~G~aaSaa 104 (213)
|.+.+...+.++..+..+.+. .-+++..++|+|..+..+... + ..+...+.|+++++.|.|++++
T Consensus 119 Gs~g~~~~~Ki~r~~e~A~~~--~lPvI~l~dSgGArlqe~~~~l~~~~~~g~i~~~~~~ls~~giP~Isvv~G~~~GGg 196 (587)
T 1pix_A 119 GAWVPGQAECLLRASDTAKTL--HVPLVYVLNCSGVKFDEQEKVYPNRRGGGTPFFRNAELNQLGIPVIVGIYGTNPAGG 196 (587)
T ss_dssp TEECTTHHHHHHHHHHHHHHH--TCCEEEEECCCEECGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECSEEETHH
T ss_pred CCCCHHHHHHHHHHHHHHHHc--CCCEEEEEeCCCCCccccchhccccccHHHHHHHHHHHhCCCCCEEEEEecCCcHHH
Confidence 445555677877777654433 468999999999987554442 2 2334445899999999999999
Q ss_pred HHHHhcCCCCcEeecc-CCeEEEeCCC
Q 028125 105 GFLLAGGEKGNRSAMP-LSRIALDSPA 130 (213)
Q Consensus 105 ~~I~~ag~~~~r~~~p-~s~i~iH~p~ 130 (213)
++. +.+|. .+|.. ++.+.+-.|.
T Consensus 197 a~~-a~~d~--vim~e~~a~i~~~GP~ 220 (587)
T 1pix_A 197 GYH-SISPT--VIIAHEKANMAVGGAG 220 (587)
T ss_dssp HHH-HHSSS--EEEEETTCEEESCCCT
T ss_pred HHH-HhcCc--eEEecCCcEEEecCHH
Confidence 999 77776 66665 5888887774
No 107
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=94.41 E-value=0.033 Score=51.17 Aligned_cols=89 Identities=12% Similarity=0.033 Sum_probs=64.0
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHH--------HHHHHHh-cCCCeEEEEccccchHHHHHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLA--------IYDTMQS-LKSPVGTHCVGFAYHLAGFLL 108 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~--------I~~~i~~-~~~~v~t~~~G~aaSaa~~I~ 108 (213)
|.+.+...++++..+..+.+. .-+++.+++|.|..+..+.. +++..+. ...|+++++.|.|.+++++.+
T Consensus 112 GS~g~~~~~Ki~r~~e~A~~~--~lPvI~l~dSgGAR~qeg~~~l~g~~~~~~~~~~~s~~iP~Isvv~Gp~~GG~a~s~ 189 (527)
T 1vrg_A 112 GSLGEMHAKKIVKLLDLALKM--GIPVIGINDSGGARIQEGVDALAGYGEIFLRNTLASGVVPQITVIAGPCAGGAVYSP 189 (527)
T ss_dssp GCBCHHHHHHHHHHHHHHHHH--TCCEEEEEEECSBCGGGTHHHHHHHHHHHHHHHHHTTTSCEEEEEEEEEBGGGGHHH
T ss_pred ccccHHHHHHHHHHHHHHHHc--CCCEEEEECCCCCCccchhHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCchHHHHHH
Confidence 334444567777777654432 56899999999988754433 2222222 237999999999999999999
Q ss_pred hcCCCCcEeeccC-CeEEEeCCC
Q 028125 109 AGGEKGNRSAMPL-SRIALDSPA 130 (213)
Q Consensus 109 ~ag~~~~r~~~p~-s~i~iH~p~ 130 (213)
..||. .+|.|+ +.+.+-.|.
T Consensus 190 al~D~--vi~~~~~a~i~~aGP~ 210 (527)
T 1vrg_A 190 ALTDF--IVMVDQTARMFITGPN 210 (527)
T ss_dssp HHSSE--EEEETTTCBCBSSCHH
T ss_pred HcCCe--EEEecCceEEEecCHH
Confidence 99998 999998 887776664
No 108
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=94.09 E-value=0.059 Score=49.55 Aligned_cols=86 Identities=14% Similarity=0.016 Sum_probs=62.1
Q ss_pred CcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHH--------HHHHHHHhcC-CCeEEEEccccchHHHHHHhcC
Q 028125 41 DEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTL--------AIYDTMQSLK-SPVGTHCVGFAYHLAGFLLAGG 111 (213)
Q Consensus 41 ~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~--------~I~~~i~~~~-~~v~t~~~G~aaSaa~~I~~ag 111 (213)
.+...++++..+..+.+. .-+++...+|.|..+.++. ..++..+.+. .|+++++.|.|++++++.+..+
T Consensus 122 g~~~~~Ki~ra~e~A~~~--~lPvI~l~dSGGARmqeg~~sl~~~~~i~~~~~~~s~~iP~Isvv~Gp~~GG~a~s~a~~ 199 (531)
T 3n6r_B 122 SETHSKKICKIMDMAMQN--GAPVIGINDSGGARIQEGVDSLAGYGEVFQRNIMASGVVPQISMIMGPCAGGAVYSPAMT 199 (531)
T ss_dssp CHHHHHHHHHHHHHHHHH--TCCEEEEECCCCBCGGGTHHHHHHHHHHHHHHHHTTTTSCEEEEECSCCBGGGGHHHHHS
T ss_pred cHHHHHHHHHHHHHHHHc--CCCEEEEeCCCccccCcccchhhhHHHHHHHHHHHhCCCCEEEEEeCCcchHHHHHhhhC
Confidence 333467777776654332 4589999999998865443 2333333333 7999999999999999999989
Q ss_pred CCCcEeeccC-CeEEEeCCC
Q 028125 112 EKGNRSAMPL-SRIALDSPA 130 (213)
Q Consensus 112 ~~~~r~~~p~-s~i~iH~p~ 130 (213)
|. .+|.++ +.+.+-.|.
T Consensus 200 D~--vi~~~~~a~i~~aGP~ 217 (531)
T 3n6r_B 200 DF--IFMVKDSSYMFVTGPD 217 (531)
T ss_dssp SE--EEEETTTCBCBSSCHH
T ss_pred CE--EEEecCCceEeecCHH
Confidence 87 899986 888776664
No 109
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=93.54 E-value=0.1 Score=48.03 Aligned_cols=86 Identities=16% Similarity=0.122 Sum_probs=61.3
Q ss_pred CcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHH-------HHHHHHhcC--CCeEEEEccccchHHHHHHhcC
Q 028125 41 DEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLA-------IYDTMQSLK--SPVGTHCVGFAYHLAGFLLAGG 111 (213)
Q Consensus 41 ~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~-------I~~~i~~~~--~~v~t~~~G~aaSaa~~I~~ag 111 (213)
.....++++..+..+.+. .-+++...+|.|..+.++.. ++..+..++ .|+++++.|.|+.++++.+..|
T Consensus 114 g~~~~~Ki~ra~e~A~~~--~lP~I~l~dSgGaRmqEg~~~l~~~~~i~~~~~~~s~~iP~Isvv~G~~~GG~a~~~al~ 191 (530)
T 3iav_A 114 GEVYGQKIVKVMDFALKT--GCPVVGINDSGGARIQEGVASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAIT 191 (530)
T ss_dssp CHHHHHHHHHHHHHHHHH--TCCEEEEECCCSBCGGGTHHHHHHHHHHHHHHHHTTTTSCEEEEECSEEEGGGGHHHHHS
T ss_pred cHHHHHHHHHHHHHHHHc--CCCEEEEEcCCCcchhhhhhhHHHHHHHHHHHHHHcCCCCEEEEEecCcchHHHHHHHhC
Confidence 333467777776654433 45898999999988755432 222233332 7999999999999999999999
Q ss_pred CCCcEeeccC-CeEEEeCCC
Q 028125 112 EKGNRSAMPL-SRIALDSPA 130 (213)
Q Consensus 112 ~~~~r~~~p~-s~i~iH~p~ 130 (213)
|. .+|.++ +.+.+-.|.
T Consensus 192 D~--~im~~~~a~i~~aGP~ 209 (530)
T 3iav_A 192 DF--TVMVDQTSHMFITGPD 209 (530)
T ss_dssp SE--EEEETTTCEEESSCHH
T ss_pred CE--EEEecCCcEEEecCHH
Confidence 87 887775 888877664
No 110
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=91.64 E-value=0.21 Score=46.08 Aligned_cols=84 Identities=12% Similarity=0.086 Sum_probs=61.3
Q ss_pred chHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHH-------HHHHHHhcC--CCeEEEEccccchHHHHHHhcCCC
Q 028125 43 EFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLA-------IYDTMQSLK--SPVGTHCVGFAYHLAGFLLAGGEK 113 (213)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~-------I~~~i~~~~--~~v~t~~~G~aaSaa~~I~~ag~~ 113 (213)
...++++..+..+.+. .-+++...+|-|..+.++.. |+..+..++ .|.++++.|.|+.++++.++.||.
T Consensus 127 ~~~~Ki~ra~e~A~~~--~lP~I~l~dSGGARmqeg~~sl~~~~~i~~~~~~~s~~iP~Isvv~gp~~GG~a~s~al~D~ 204 (548)
T 2bzr_A 127 VYGEKIVKVQELAIKT--GRPLIGINDGAGARIQEGVVSLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPALTDF 204 (548)
T ss_dssp HHHHHHHHHHHHHHHH--TCCEEEEECCCSCCGGGTTHHHHHHHHHHHHHHHTTTTSCEEEEECSEEESGGGHHHHHSSE
T ss_pred hHHHHHHHHHHHHHHc--CCCEEEEEcCCCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEecCCCchHHHHHHHhCCe
Confidence 3467777776654332 55788888898887644332 333333333 799999999999999999999998
Q ss_pred CcEeeccC-CeEEEeCCC
Q 028125 114 GNRSAMPL-SRIALDSPA 130 (213)
Q Consensus 114 ~~r~~~p~-s~i~iH~p~ 130 (213)
.+|.|+ +.+.+-.|.
T Consensus 205 --ii~~~~~a~i~~aGP~ 220 (548)
T 2bzr_A 205 --VIMVDQTSQMFITGPD 220 (548)
T ss_dssp --EEEETTTCEEESSCHH
T ss_pred --EEeccCceeEEeccHH
Confidence 999997 888887765
No 111
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=91.36 E-value=0.15 Score=46.84 Aligned_cols=84 Identities=12% Similarity=0.084 Sum_probs=62.2
Q ss_pred chHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHH-------HHHHHHhcC--CCeEEEEccccchHHHHHHhcCCC
Q 028125 43 EFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLA-------IYDTMQSLK--SPVGTHCVGFAYHLAGFLLAGGEK 113 (213)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~-------I~~~i~~~~--~~v~t~~~G~aaSaa~~I~~ag~~ 113 (213)
...++++..+..+.+. .-+++.+.+|-|..+.++.. ++..+..++ .|.++++.|.|+.++++.++.||.
T Consensus 114 ~~~~Ki~ra~e~A~~~--~lP~I~l~~SGGARmqeg~~sl~~~~~i~~~~~~~s~~iP~Isvv~gp~~GG~a~s~~l~D~ 191 (523)
T 1on3_A 114 TQSTKVVETMEQALLT--GTPFLFFYDSGGARIQEGIDSLSGYGKMFFANVKLSGVVPQIAIIAGPCAGGASYSPALTDF 191 (523)
T ss_dssp HHHHHHHHHHHHHHHH--TCCEEEEEEECSBCGGGTHHHHHHHHHHHHHHHHHTTTSCEEEEEEEEEESGGGHHHHHSSE
T ss_pred HHHHHHHHHHHHHHHc--CCCEEEEEcCCCCChhhHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCCchHHHHHHhhCCe
Confidence 3467777777654432 55788888999987755443 222222222 799999999999999999999998
Q ss_pred CcEeeccCCeEEEeCCC
Q 028125 114 GNRSAMPLSRIALDSPA 130 (213)
Q Consensus 114 ~~r~~~p~s~i~iH~p~ 130 (213)
.+|.|++.+.+-.|.
T Consensus 192 --ii~~~~a~i~~aGP~ 206 (523)
T 1on3_A 192 --IIMTKKAHMFITGPQ 206 (523)
T ss_dssp --EEEETTCEEESSCHH
T ss_pred --EEEeCCCEEEecCHH
Confidence 999999999887775
No 112
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=91.16 E-value=0.29 Score=45.15 Aligned_cols=87 Identities=10% Similarity=0.024 Sum_probs=59.0
Q ss_pred cCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHH----------HHHHHHHHh---cCCCeEEEEccccchHHHH
Q 028125 40 IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPT----------LAIYDTMQS---LKSPVGTHCVGFAYHLAGF 106 (213)
Q Consensus 40 I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~----------~~I~~~i~~---~~~~v~t~~~G~aaSaa~~ 106 (213)
+.+...++++..+..+.+. .-+++..++|.|..+... -.|+..+.. .+.|+++++.|.|++++++
T Consensus 137 ~g~~~~~Ki~ra~e~A~~~--~lPvI~l~dSgGARl~~q~~~~~~~~~~~~i~~~~~~ls~~giP~Isvv~G~~~GGga~ 214 (555)
T 3u9r_B 137 YYPLTVKKHLRAQAIALEN--RLPCIYLVDSGGANLPRQDEVFPDREHFGRIFFNQANMSARGIPQIAVVMGSCTAGGAY 214 (555)
T ss_dssp BCHHHHHHHHHHHHHHHHH--TCCEEEEECCCCBCGGGGGGTSSSTTSTTHHHHHHHHHHHTTCCEEEEECSCCBGGGGH
T ss_pred CCHHHHHHHHHHHHHHHHc--CCCEEEEECCCCCCCCCcceeecccccHHHHHHHHHHHhcCCCCEEEEEecCCCccHHH
Confidence 3334467777766654433 458999999999874211 133433333 4589999999999999999
Q ss_pred HHhcCCCCcEee-ccCCeEEEeCCC
Q 028125 107 LLAGGEKGNRSA-MPLSRIALDSPA 130 (213)
Q Consensus 107 I~~ag~~~~r~~-~p~s~i~iH~p~ 130 (213)
.+..++. .++ .+++.+.+-.|.
T Consensus 215 ~~a~~d~--vim~e~~a~i~~aGP~ 237 (555)
T 3u9r_B 215 VPAMSDE--TVMVREQATIFLAGPP 237 (555)
T ss_dssp HHHTSSE--EEEETTTCBCBSSCHH
T ss_pred HHHhCCc--eEEecCCceEEEccHH
Confidence 9888886 554 456777766654
No 113
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=91.03 E-value=0.28 Score=45.01 Aligned_cols=83 Identities=14% Similarity=0.023 Sum_probs=60.6
Q ss_pred hHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHH-------HHHHHHhcC--CCeEEEEccccchHHHHHHhcCCCC
Q 028125 44 FSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLA-------IYDTMQSLK--SPVGTHCVGFAYHLAGFLLAGGEKG 114 (213)
Q Consensus 44 ~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~-------I~~~i~~~~--~~v~t~~~G~aaSaa~~I~~ag~~~ 114 (213)
..++++..+..+.+. .-+++...+|-|..+.++.. ++..+..++ .|.++++.|.|+.++++.++.||.
T Consensus 111 ~~~Ki~ra~e~A~~~--~~P~I~l~~SGGaRmqeg~~sl~~~~~i~~~~~~~s~~iP~Isvv~gp~~GG~a~s~~l~D~- 187 (522)
T 1x0u_A 111 HANKIVRAYELALKV--GAPVVGINDSGGARIQEGALSLEGYGAVFKMNVMASGVIPQITIMAGPAAGGAVYSPALTDF- 187 (522)
T ss_dssp HHHHHHHHHHHHHHH--TCCEEEEECCCSBCGGGTHHHHHHHHHHHHHHHHHTTTSCEEEEECSEEEGGGGHHHHHSSE-
T ss_pred HHHHHHHHHHHHHHc--CCCEEEEEcCCCCChhHHHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHhcCCe-
Confidence 467777776654432 45788888888887654443 222222223 799999999999999999999998
Q ss_pred cEeeccC-C-eEEEeCCC
Q 028125 115 NRSAMPL-S-RIALDSPA 130 (213)
Q Consensus 115 ~r~~~p~-s-~i~iH~p~ 130 (213)
.+|.|+ + .+.+-.|.
T Consensus 188 -~i~~~~~a~~i~~aGP~ 204 (522)
T 1x0u_A 188 -IIMIKGDAYYMFVTGPE 204 (522)
T ss_dssp -EEEECSTTCEEESSCHH
T ss_pred -EEEecCCccEEEecCHH
Confidence 899998 8 88887775
No 114
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=86.30 E-value=0.92 Score=43.54 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=36.0
Q ss_pred CCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCC
Q 028125 89 KSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA 130 (213)
Q Consensus 89 ~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~ 130 (213)
..|+++++.|.|.++++|+...||. .+|.+++.+.+-.|.
T Consensus 259 ~iP~IsvV~G~~~GGgAy~~~lgD~--vI~~~~a~i~ltGp~ 298 (793)
T 2x24_A 259 EIVTISMVSCRALGIGAYLVRLGQR--VIQVENSHIILTGAT 298 (793)
T ss_dssp HSCEEEEECSEEETHHHHHHHHTCC--EEEETTCEEESSCHH
T ss_pred CCCEEEEEecCCchHHHHHHhhCCe--EEEeccccEEecCHH
Confidence 3899999999999999999999998 899999988876664
No 115
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=84.89 E-value=2.3 Score=37.02 Aligned_cols=69 Identities=10% Similarity=0.037 Sum_probs=53.3
Q ss_pred cchHHHHHHHHHhhccCCCCCceEEEE-eCCCCChhHHHHHHHHHHh-------------------------cCCCeEEE
Q 028125 42 EEFSNQILATMLYLDSVDDSKRVYMYI-NGPGGDVTPTLAIYDTMQS-------------------------LKSPVGTH 95 (213)
Q Consensus 42 ~~~~~~l~~~l~~l~~~~~~~~I~l~I-NSpGG~v~~~~~I~~~i~~-------------------------~~~~v~t~ 95 (213)
....+.+.+.+..+... ..+.++|-+ |-|||.+..+..+.+.+-. ...|+++.
T Consensus 211 ~~~~~~~~~~l~~l~~~-~~~~lIlDLR~N~GG~~~~~~~~~~~f~~~~~i~~~~~r~~~~~~~~~~~~~~~~~~pv~VL 289 (388)
T 1fc6_A 211 SNTTAAAQQAFTELSKQ-GVAGLVLDIRNNGGGLFPAGVNVARMLVDRGDLVLIADSQGIRDIYSADGNSIDSATPLVVL 289 (388)
T ss_dssp TTHHHHHHHHHHHHHHT-TCSEEEEECTTCCCBCHHHHHHHHHHHCSSSEEEEEEETTEEEEEEECCSCCSCSSSCEEEE
T ss_pred cchHHHHHHHHHHHHhC-CCCeEEEEcCCCCCCCHHHHHHHHHHHcCCCcEEEEecCCCceeEEecCCccccCCCCEEEE
Confidence 34456677777766554 478899988 7789999999999887732 34689999
Q ss_pred EccccchHHHHHHhcC
Q 028125 96 CVGFAYHLAGFLLAGG 111 (213)
Q Consensus 96 ~~G~aaSaa~~I~~ag 111 (213)
+.+.+||++-+++.+-
T Consensus 290 vn~~taSasEi~a~al 305 (388)
T 1fc6_A 290 VNRGTASASEVLAGAL 305 (388)
T ss_dssp ECTTCCTHHHHHHHHH
T ss_pred eCCCCccHHHHHHHHH
Confidence 9999999998887754
No 116
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=78.76 E-value=2.3 Score=40.58 Aligned_cols=39 Identities=13% Similarity=0.055 Sum_probs=34.5
Q ss_pred CCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCC
Q 028125 90 SPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA 130 (213)
Q Consensus 90 ~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~ 130 (213)
.|.++++.|.|+.+|+|+..-||. .+|.+++.+.+-.|.
T Consensus 247 IPqIsvV~G~c~GGgAY~paL~D~--vImv~~s~ifltGP~ 285 (758)
T 3k8x_A 247 IFTITLVTCRSVGIGAYLVRLGQR--AIQVEGQPIILTGAP 285 (758)
T ss_dssp SCEEEEECSCEETHHHHHHHHTCE--EEEETTCCEESSCHH
T ss_pred CCEEEEEccCCchHHHHHHhhCCE--EEEECCceEEEeCHH
Confidence 699999999999999999999998 899999887766553
No 117
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=78.01 E-value=3.8 Score=36.13 Aligned_cols=68 Identities=7% Similarity=0.052 Sum_probs=52.1
Q ss_pred HHHHHHHHHhhccCCCCCceEEEE-eCCCCChhHHHHHHHHHHhc-----------------------------------
Q 028125 45 SNQILATMLYLDSVDDSKRVYMYI-NGPGGDVTPTLAIYDTMQSL----------------------------------- 88 (213)
Q Consensus 45 ~~~l~~~l~~l~~~~~~~~I~l~I-NSpGG~v~~~~~I~~~i~~~----------------------------------- 88 (213)
.+.+.+.+..|..+ ..+.++|-+ |-|||.+..+..|.+.+-.-
T Consensus 209 ~~~l~~al~~l~~~-~~~~lIlDLR~N~GG~l~~a~~la~~f~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 287 (403)
T 3k50_A 209 NDDLRRAFRDFQTG-GVNEFVLDLRYNTGGSLDCAQLLCTMLAPADKMNQLLALLRYSDKRVEANQDLTFNPELIQSGAN 287 (403)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEECTTCCCBCHHHHHHHHHHHSCGGGTTSEEEEEECCTTCGGGCEEEECCGGGTTTSCC
T ss_pred HHHHHHHHHHHHHC-CCcEEEEEcCCCCCCCHHHHHHHHHHhcCCCccceeEEEEEEcCCCCcceeEEeccccccccccc
Confidence 46778888777665 488999999 88999999999998766410
Q ss_pred --CCCeEEEEccccchHHHHHHhcCCC
Q 028125 89 --KSPVGTHCVGFAYHLAGFLLAGGEK 113 (213)
Q Consensus 89 --~~~v~t~~~G~aaSaa~~I~~ag~~ 113 (213)
..|+++.+.+.+||++-+++.+-+.
T Consensus 288 ~~~~~~~vL~~~~taSa~E~~~~~l~~ 314 (403)
T 3k50_A 288 LNLSTVYVLTTNATRGAAEMVINCLNP 314 (403)
T ss_dssp CCCSEEEEEECTTCCTHHHHHHHHHTT
T ss_pred cCCCCEEEEECCCCccHHHHHHHHHhh
Confidence 0267888889999999888775443
No 118
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=73.88 E-value=6.3 Score=32.90 Aligned_cols=66 Identities=15% Similarity=0.093 Sum_probs=41.7
Q ss_pred cEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccccc
Q 028125 32 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAY 101 (213)
Q Consensus 32 ~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~aa 101 (213)
.+|.+.+..+.. -.+.+-|.+|.+++..+.|.||+.+.|-.-..+.....+ ..++||+++..|..+
T Consensus 173 ~~vs~G~~~~~~--~~~~d~l~~~~~D~~t~~I~l~~E~~~~~~~~~~~~~~~--~~~KPVv~~k~G~~~ 238 (288)
T 1oi7_A 173 TTVGIGGDPVIG--TTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKD--HMKKPVVGFIGGRSA 238 (288)
T ss_dssp EEEECCSSSCCS--SCHHHHHHHHHTCTTCCEEEEEECSSSSHHHHHHHHHHH--HCCSCEEEEESCC--
T ss_pred EEEeeCCCcCCC--CCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh--cCCCCEEEEEecCCC
Confidence 567777765311 124455666677888999999999866322223222233 567999999999877
No 119
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=69.43 E-value=12 Score=32.18 Aligned_cols=65 Identities=17% Similarity=0.282 Sum_probs=47.5
Q ss_pred CcEEEEccc--cCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHh--cCCCeEEEEccccch
Q 028125 31 ERVIFIGQN--IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQS--LKSPVGTHCVGFAYH 102 (213)
Q Consensus 31 ~~iI~i~G~--I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~--~~~~v~t~~~G~aaS 102 (213)
..+|.+.+. .+-. +.+-|.+|.+++..+.|.|+.- .||.-+ ....+.+++ ..+||+++..|..+.
T Consensus 196 S~~VsiGn~~~~d~~----~~D~l~~~~~Dp~T~~I~l~gE-i~g~~e--~~~~~~~r~~~~~KPVV~~kaGrs~~ 264 (334)
T 3mwd_B 196 YEGVAIGGDRYPGST----FMDHVLRYQDTPGVKMIVVLGE-IGGTEE--YKICRGIKEGRLTKPIVCWCIGTCAT 264 (334)
T ss_dssp EEEEECCSSSSCSSC----HHHHHHHHHTCTTCCEEEEEEE-SSSSHH--HHHHHHHHTTSCCSCEEEEEECTTCC
T ss_pred EEEEECCCCccCCCC----HHHHHHHHhcCCCCCEEEEEEe-cCChHH--HHHHHHHHhhcCCCCEEEEEcCCCcc
Confidence 356777776 4443 4455666677778899999866 566654 778888986 568999999998775
No 120
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=69.37 E-value=9.8 Score=31.63 Aligned_cols=68 Identities=12% Similarity=0.116 Sum_probs=45.7
Q ss_pred cCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccccc
Q 028125 30 RERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAY 101 (213)
Q Consensus 30 ~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~aa 101 (213)
-..+|.+.+..+.. -.+.+-|.+|..++..+.|.||+.+-|-.-..+.....+ ..++||+++..|..+
T Consensus 171 ~s~~vs~G~~~~~~--~~~~d~l~~l~~D~~t~~I~l~~E~~~~~~~~~~~~~~~--~~~KPVv~~k~G~~~ 238 (288)
T 2nu8_A 171 QSTCVGIGGDPIPG--SNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKE--HVTKPVVGYIAGVTA 238 (288)
T ss_dssp EEEEEECCSSSSCS--SCHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHH--HCCSCEEEEEECTTC
T ss_pred EEEEEeeCCCcCCC--CCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh--cCCCCEEEEEeCCCC
Confidence 33567777765311 124555666677788999999999876544444444444 567999999998877
No 121
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=69.22 E-value=9.3 Score=32.18 Aligned_cols=67 Identities=10% Similarity=0.023 Sum_probs=48.0
Q ss_pred cEEEEccccC-cchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHh--cCCCeEEEEccccc
Q 028125 32 RVIFIGQNID-EEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQS--LKSPVGTHCVGFAY 101 (213)
Q Consensus 32 ~iI~i~G~I~-~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~--~~~~v~t~~~G~aa 101 (213)
.+|.+.+.-+ +-. +.+-|.+|.+++.++.|.||+.+-|-.-.++....+..+. .++||+++..|..+
T Consensus 181 ~~vs~G~~~~~~~~---~~d~l~~~~~Dp~T~~I~l~~E~~g~~e~~~~~f~~~~~~~~~~KPVv~~k~G~s~ 250 (305)
T 2fp4_A 181 LCVGIGGDPFNGTD---FTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVSFIAGLTA 250 (305)
T ss_dssp EEEECCSSSSCSCC---HHHHHHHHHHCTTCCEEEEEEESSSSHHHHHHHHHHHHSCSTTCCCEEEEEECTTC
T ss_pred EEeccCCCcCCCCC---HHHHHHHHhcCCCCcEEEEEEecCCchhhHHHHHHHHHHHhcCCCCEEEEEecCCc
Confidence 5677777642 212 4455666677788999999999877656677777776653 26899999988877
No 122
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=65.67 E-value=9.5 Score=31.95 Aligned_cols=67 Identities=12% Similarity=0.043 Sum_probs=41.2
Q ss_pred cEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccccc
Q 028125 32 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAY 101 (213)
Q Consensus 32 ~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~aa 101 (213)
.+|.+.+..+.. -.+.+-|.+|.+++..+.|.||+.+.|-.-..+.....+ ...++||+++..|..+
T Consensus 180 ~~vs~G~~~~~~--~~~~d~l~~~~~D~~T~~I~l~~E~~~~~~~~~~~~~~~-~~~~KPVv~~k~G~s~ 246 (297)
T 2yv2_A 180 TVIGIGGDPIVG--LSFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMIKK-GEFTKPVIAYIAGRTA 246 (297)
T ss_dssp EEEECCSSSSCS--SCHHHHHHHHHTCTTCSEEEEEECSSSSHHHHHHHHHHT-TSCCSCEEEEESCCC-
T ss_pred EEEeeCCCcCCC--CCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh-ccCCCCEEEEEeCCCC
Confidence 567777765311 124455666677788999999999754222222222222 1457899999999877
No 123
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=61.81 E-value=11 Score=31.50 Aligned_cols=65 Identities=15% Similarity=0.122 Sum_probs=42.5
Q ss_pred cEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccccc
Q 028125 32 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAY 101 (213)
Q Consensus 32 ~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~aa 101 (213)
.+|.+.+..+.. -.+.+-|.+|.+++..+.|.||+.+.|-.-.. ....++..++||+++..|..+
T Consensus 179 ~~vs~G~~~~~~--~~~~d~l~~~~~D~~T~~I~l~~E~~g~~~~~---~~~~~~~~~KPVv~~k~G~~~ 243 (294)
T 2yv1_A 179 TCVGIGGDPIVG--LRYKEVLDLFEKDDETEAIVMIGEIGGGAEEE---AAKFIEKMKKPVIGYIAGQSA 243 (294)
T ss_dssp EEEECCSSSSCS--SCHHHHHHHHHTCTTCSEEEEEEESSSSHHHH---HHHHHTTCSSCEEEEEECC--
T ss_pred EEEeeCCCCCCC--CCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHH---HHHHHHhCCCCEEEEEecCCC
Confidence 567777765311 12445566667778899999999997643222 344555578999999999877
No 124
>1j7x_A IRBP, interphotoreceptor retinoid-binding protein; beta BETA alpha spiral, transport protein; 1.80A {Xenopus laevis} SCOP: c.14.1.2
Probab=59.40 E-value=12 Score=31.09 Aligned_cols=52 Identities=12% Similarity=-0.034 Sum_probs=40.6
Q ss_pred CCCCceEEEE-eCCCCChhHHHHHHHHHHh---------------------------------cCCCeEEEEccccchHH
Q 028125 59 DDSKRVYMYI-NGPGGDVTPTLAIYDTMQS---------------------------------LKSPVGTHCVGFAYHLA 104 (213)
Q Consensus 59 ~~~~~I~l~I-NSpGG~v~~~~~I~~~i~~---------------------------------~~~~v~t~~~G~aaSaa 104 (213)
.+.+.++|-+ |-|||.+..+..|.+.+-. ...|+++.+.+.++|++
T Consensus 138 ~~~~~LIiDLR~N~GG~~~~~~~l~~~f~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~~~~~~~pvvVLvn~~TaSAs 217 (302)
T 1j7x_A 138 TITENLIIDLRYNVGGSSTAVPLLLSYFLDPETKIHLFTLHNRQQNSTDEVYSHPKVLGKPYGSKKGVYVLTSHQTATAA 217 (302)
T ss_dssp TTCSEEEEECTTCCCBCSTTHHHHHHTTSCSSCCCEEEEEEETTTTCCEEEECCSCCSSCCCCSSSEEEEEECTTCCTHH
T ss_pred CCCCeEEEEeCCCCCCChhHHHHHHHHhcCCCcceeeEEEEccCCCCceeecccccccCCccCCCCCEEEEeCCCcCcHH
Confidence 3578999999 8899999988888766521 11368888899999999
Q ss_pred HHHHhc
Q 028125 105 GFLLAG 110 (213)
Q Consensus 105 ~~I~~a 110 (213)
-+++.+
T Consensus 218 E~~a~a 223 (302)
T 1j7x_A 218 EEFAYL 223 (302)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
No 125
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=58.76 E-value=19 Score=34.69 Aligned_cols=65 Identities=17% Similarity=0.308 Sum_probs=46.8
Q ss_pred cEEEEccc--cCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHH--hcCCCeEEEEccccchH
Q 028125 32 RVIFIGQN--IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQ--SLKSPVGTHCVGFAYHL 103 (213)
Q Consensus 32 ~iI~i~G~--I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~--~~~~~v~t~~~G~aaSa 103 (213)
.+|.+.+. ++-. +.+-|.++.+++..+.|.||+- +||.-+ +...+.++ ..++||+++..|..+.+
T Consensus 683 ~~VsiGnd~~~d~~----~~D~L~~l~~Dp~T~~Ivly~E-i~g~~f--~~aA~~~~~~~~~KPVVa~kaGrsa~~ 751 (829)
T 3pff_A 683 EGVAIGGDRYPGST----FMDHVLRYQDTPGVKMIVVLGE-IGGTEE--YKICRGIKEGRLTKPIVCWCIGTCATM 751 (829)
T ss_dssp EEEECCSSSSCSSC----HHHHHHHHHTCTTCCEEEEEEE-SSSSHH--HHHHHHHHTTSCCSCEEEEEECSSTTC
T ss_pred EEEecCCCCCCCCC----HHHHHHHHhhCCCCCEEEEEEe-cCchHH--HHHHHHHHhccCCCCEEEEEecCcCcc
Confidence 56667765 2322 4556667778888999999999 677643 45566676 56799999999987763
No 126
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=56.21 E-value=31 Score=33.27 Aligned_cols=79 Identities=9% Similarity=0.058 Sum_probs=54.6
Q ss_pred hhccCcEEEEccc-cCcchHHHHHHHHHhhccCCCCCceEEEE-eCCCCChhHHHHHHHHHH------------------
Q 028125 27 ALYRERVIFIGQN-IDEEFSNQILATMLYLDSVDDSKRVYMYI-NGPGGDVTPTLAIYDTMQ------------------ 86 (213)
Q Consensus 27 ~~~~~~iI~i~G~-I~~~~~~~l~~~l~~l~~~~~~~~I~l~I-NSpGG~v~~~~~I~~~i~------------------ 86 (213)
++.+.+|-||.=. .+....+.+.+.|..+ ...+.++|-+ |-|||.+.+++ .+.+.
T Consensus 847 ~~~~~~igyi~~~~f~~~~~~~~~~~~~~~---~~~~~liiDlR~N~GG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 921 (1045)
T 1k32_A 847 ERSKGTIGYIHIPDMGMMGLNEFYRLFINE---SSYQGLIVDVRFNGGGFVSQLI--IEKLMNKRIGYDNPRRGTLSPYP 921 (1045)
T ss_dssp HHTTTSEEEEECCCBSHHHHHHHHHHHHHH---TTSSEEEEECTTCCCBSCHHHH--HHHHTCBCCEEEEESSSCCEEES
T ss_pred EecCCCEEEEEECccCchHHHHHHHHHHHh---CCCCEEEEEcCcCCCCCHHHHH--HhhccCCcEEEEecCCCceeecc
Confidence 4456667666422 2334556666666543 3478999999 88889988654 55552
Q ss_pred --hcCCCeEEEEccccchHHHHHHhc
Q 028125 87 --SLKSPVGTHCVGFAYHLAGFLLAG 110 (213)
Q Consensus 87 --~~~~~v~t~~~G~aaSaa~~I~~a 110 (213)
....|+++.+.+.+||++-+++.+
T Consensus 922 ~~~~~~~~~vL~~~~taSa~e~~~~~ 947 (1045)
T 1k32_A 922 TNSVRGKIIAITNEYAGSDGDIFSFS 947 (1045)
T ss_dssp TTCBCSEEEEEECTTCCTHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCccHHHHHHHH
Confidence 234699999999999999888775
No 127
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A*
Probab=53.83 E-value=16 Score=26.18 Aligned_cols=78 Identities=18% Similarity=0.072 Sum_probs=46.2
Q ss_pred cEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC-CCh---hHHHHHHHHHHhcCCCeEEEEccccchHHHHH
Q 028125 32 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG-GDV---TPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 32 ~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG-G~v---~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I 107 (213)
-++.+.|++|.+.+..+.+.+...-.+.+.+.+.|.+..-. =+- ..-..++..++..+.. +++.|.-...+-.+
T Consensus 14 lvv~l~G~lD~~~a~~l~~~ll~~i~~~~~~~vIlDlsgV~~iDs~g~~~L~~~~~~~~l~G~~--~~l~Gi~p~va~~l 91 (123)
T 3zxn_A 14 WVVAIEETLHDQSVIQFKEELLHNITGVAGKGLVIDISALEVVDEFVTRVLIEISRLAELLGLP--FVLTGIKPAVAITL 91 (123)
T ss_dssp EEEECCCCC-CHHHHHHHHHHHHHHTSSCCSEEEEECTTCSSCCHHHHHHHHHHHHHHHHHTCC--EEEECCCHHHHHHH
T ss_pred EEEEEeEeeCHHHHHHHHHHHHHHHHhcCCCEEEEEcCCCCcccHHHHHHHHHHHHHHHHCCCE--EEEEcCCHHHHHHH
Confidence 55889999999999999999875433344556666543321 111 1223455556555544 35556666666555
Q ss_pred HhcC
Q 028125 108 LAGG 111 (213)
Q Consensus 108 ~~ag 111 (213)
...|
T Consensus 92 ~~~G 95 (123)
T 3zxn_A 92 TEMG 95 (123)
T ss_dssp HHTT
T ss_pred HHhC
Confidence 5555
No 128
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=53.24 E-value=16 Score=32.98 Aligned_cols=66 Identities=17% Similarity=0.268 Sum_probs=45.8
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccccch
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYH 102 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~aaS 102 (213)
.+|.+.+. |.+ -.+.+-|.++..++.++.|.+|+-++ .+ .....+.++.+..++||+++..|....
T Consensus 141 ~~Vs~Gn~~l~~~i~d---v~~~D~l~~l~~Dp~T~~I~ly~E~~-~e-~~~~~f~~~ar~~~KPVV~~k~Grs~~ 211 (480)
T 3dmy_A 141 HAIGLGGRDLSREVGG---ISALTALEMLSADEKSEVLAFVSKPP-AE-AVRLKIVNAMKATGKPTVALFLGYTPA 211 (480)
T ss_dssp EEEECCTTTTSTTTTT---HHHHHHHHHHHTCTTCCEEEEEESCC-CH-HHHHHHHHHHHHHCSCEEEEETTCCCS
T ss_pred EEEEcCCCccccccCC---CCHHHHHHHHhcCCCCCEEEEEEecC-Cc-HHHHHHHHHHHhCCCCEEEEEeCCCCc
Confidence 56777776 222 23556666777788899999999863 11 112566777777889999999988654
No 129
>2kpt_A Putative secreted protein; methods development, alpha/beta, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum}
Probab=37.16 E-value=27 Score=26.09 Aligned_cols=46 Identities=11% Similarity=0.078 Sum_probs=37.8
Q ss_pred cCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCCh
Q 028125 30 RERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDV 75 (213)
Q Consensus 30 ~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v 75 (213)
..+|.=-.|.+++.....|.+.|..++.....+-+++.++|-+|.-
T Consensus 14 ~~~V~D~A~vLs~~~~~~L~~~l~~l~~~tg~qi~VvtV~sl~g~~ 59 (148)
T 2kpt_A 14 QDNVTDYTGQISSSDITNIQAAIDDVKASEQKVIFVVFLSSFDGVD 59 (148)
T ss_dssp CCSEEESSSCSCHHHHHHHHHHHHHHHHHSCCEEEEEECSCCTTTC
T ss_pred CceeeeCCCCCCHHHHHHHHHHHHHHHHhhCCEEEEEEECCCCCCC
Confidence 4466667788888888889999999988877888999999998863
No 130
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=35.83 E-value=85 Score=23.09 Aligned_cols=93 Identities=17% Similarity=0.158 Sum_probs=50.9
Q ss_pred eeeecCCCCCCchhhhHHhhcc--CcEEEEccccCcch---HHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHH
Q 028125 9 VLYRTPGEGSWQWVDLWNALYR--ERVIFIGQNIDEEF---SNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYD 83 (213)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~--~~iI~i~G~I~~~~---~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~ 83 (213)
+-.-+||.-..--.+..+.++. +.+..++.+.++.. .+.+.+.+..+. +..++|.+..+=.||++......+
T Consensus 6 iii~sHG~~A~gl~~~~~~i~G~~~~v~av~~~~~~~~~~~~~~i~~~i~~~~--~~~~gvliLtDl~GGSp~n~a~~l- 82 (144)
T 3lfh_A 6 VLIITHGDFGKGLLSGAEVIIGKQENVHTVGLNLGDNIEVVRKEVEKIIKEKL--QEDKEIIIVVDLFGGSPFNIALSM- 82 (144)
T ss_dssp EEEEEETTHHHHHHHHHHHHHCCCSSEEEEEECTTCCHHHHHHHHHHHHHHHH--TTTCEEEEEESSSSSHHHHHHHHH-
T ss_pred EEEEeCcHHHHHHHHHHHHHcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHhh--CCCCcEEEEEeCCCCCHHHHHHHH-
Confidence 3445666422222333445554 46788887776543 233334433220 446789999999999986654433
Q ss_pred HHHhcCCCeEEEEccccchHHHHHH
Q 028125 84 TMQSLKSPVGTHCVGFAYHLAGFLL 108 (213)
Q Consensus 84 ~i~~~~~~v~t~~~G~aaSaa~~I~ 108 (213)
.+.. ++ -++.|....+..=++
T Consensus 83 -~~~~--~v-~vItGvNLpMlle~~ 103 (144)
T 3lfh_A 83 -MKEY--DV-KVITGINMPMLVELL 103 (144)
T ss_dssp -HHHH--CC-EEEESCCHHHHHHHH
T ss_pred -hcCC--CE-EEEeCCCHHHHHHHH
Confidence 2332 32 345566665554333
No 131
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=34.47 E-value=37 Score=29.59 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=37.8
Q ss_pred HHHHHHHHHhhccCCCCCceEEEEeCCCCCh---hHHHHHHHHHHhc--CCCeEEEEccccc
Q 028125 45 SNQILATMLYLDSVDDSKRVYMYINGPGGDV---TPTLAIYDTMQSL--KSPVGTHCVGFAY 101 (213)
Q Consensus 45 ~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v---~~~~~I~~~i~~~--~~~v~t~~~G~aa 101 (213)
.+.+...+..+-+++..+.|.+ |.+||-. .-+..|.++++.+ ++||++...|...
T Consensus 286 ~e~~~~al~~~l~d~~v~~ilv--~i~ggi~~~~~vA~~i~~a~~~~~~~kPvvv~~~G~~~ 345 (397)
T 3ufx_B 286 ADVVYNALKVVLKDPDVKGVFI--NIFGGITRADEVAKGVIRALEEGLLTKPVVMRVAGTAE 345 (397)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEE--EEEEEEEESHHHHHHHHHHHTTTCCCSCEEEEEEEECH
T ss_pred HHHHHHHHHHHHcCCCCCEEEE--ECCCCCCCHHHHHHHHHHHHHhhCCCCcEEEEccCCCH
Confidence 4566666666556666777775 6667643 3456788888877 6899988888643
No 132
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=32.13 E-value=58 Score=24.74 Aligned_cols=49 Identities=16% Similarity=0.247 Sum_probs=35.0
Q ss_pred HHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccc
Q 028125 46 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF 99 (213)
Q Consensus 46 ~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~ 99 (213)
..+++.|.... ++.+.| .|| ||+..-.+.+|.|+|.....|++=+=...
T Consensus 55 GeLId~Ih~a~--~~~dgi--IIN-pgA~THtSvAlrDAl~~v~~P~VEVHiSN 103 (154)
T 1uqr_A 55 ESLINRIHQAF--QNTDFI--IIN-PGAFTHTSVAIRDALLAVSIPFIEVHLSN 103 (154)
T ss_dssp HHHHHHHHHTT--TTCCEE--EEE-CTTHHHHCHHHHHHHHHHTCCEEEEESSC
T ss_pred HHHHHHHHHhh--hcCcEE--EEC-cchhccchHHHHHHHHhCCCCEEEEEecC
Confidence 35677776442 234444 444 99999999999999999999977655443
No 133
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=31.93 E-value=77 Score=27.96 Aligned_cols=65 Identities=22% Similarity=0.353 Sum_probs=41.1
Q ss_pred cCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC-CChhHHHHHHHHHHhcCCCeEEEEccccc
Q 028125 30 RERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG-GDVTPTLAIYDTMQSLKSPVGTHCVGFAY 101 (213)
Q Consensus 30 ~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG-G~v~~~~~I~~~i~~~~~~v~t~~~G~aa 101 (213)
-..+|.+.+..+-. +.+-|.+|..++.++.|.||+.+-| |..+ +...+.+. .++||+++..|..+
T Consensus 176 ~s~~vs~G~~~~~~----~~d~l~~~~~D~~t~~I~l~~E~i~~~~~f--~~~a~~~~-~~KPVv~~k~G~~~ 241 (457)
T 2csu_A 176 FSKFISVGNMADVD----FAELMEYLADTEEDKAIALYIEGVRNGKKF--MEVAKRVT-KKKPIIALKAGKSE 241 (457)
T ss_dssp ESEEEECTTCCSSC----HHHHHHHHTTCSSCCEEEEEESCCSCHHHH--HHHHHHHH-HHSCEEEEECC---
T ss_pred eeEEEECCCcCCCC----HHHHHHHHhcCCCCCEEEEEEecCCCHHHH--HHHHHHhc-CCCCEEEEEcCCCc
Confidence 34677788776543 4555667777888999999999854 3322 22233332 46899999987654
No 134
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=30.92 E-value=51 Score=25.86 Aligned_cols=27 Identities=15% Similarity=0.160 Sum_probs=16.0
Q ss_pred CCCCeeeeecCCCCCCchhhhHHhhcc
Q 028125 4 IGTPKVLYRTPGEGSWQWVDLWNALYR 30 (213)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 (213)
-|.|.|.+---|.+...|..+...+-+
T Consensus 2 ~~~pvvllHG~~~~~~~~~~l~~~L~~ 28 (254)
T 3ds8_A 2 DQIPIILIHGSGGNASSLDKMADQLMN 28 (254)
T ss_dssp CCCCEEEECCTTCCTTTTHHHHHHHHH
T ss_pred CCCCEEEECCCCCCcchHHHHHHHHHH
Confidence 367777543333444567777776643
No 135
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=30.70 E-value=57 Score=24.46 Aligned_cols=49 Identities=18% Similarity=0.287 Sum_probs=34.8
Q ss_pred HHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccc
Q 028125 46 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF 99 (213)
Q Consensus 46 ~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~ 99 (213)
..+++.|.... ++.+.|. || ||+..-.+.+|.|+|...+.|++=+=...
T Consensus 54 geLid~Ih~a~--~~~dgii--iN-pgA~THtSvAlrDAl~~v~~P~VEVHiSN 102 (143)
T 1gqo_A 54 GDLIDAIHEAE--EQYSGIV--LN-PGALSHYSYAIRDAVSSISLPVVEVHLSN 102 (143)
T ss_dssp HHHHHHHHHHT--TTCSEEE--EE-CGGGGGTCHHHHHHHHTSCSCEEEEESSC
T ss_pred HHHHHHHHHhh--hcCcEEE--Ec-cchhccccHHHHHHHHhCCCCEEEEEecC
Confidence 35667776442 2345544 44 99999999999999999999977655433
No 136
>2i6e_A Hypothetical protein; NYSGXRC,10093B, structural genomics, PSI-2, protein structure initiative; 2.50A {Deinococcus radiodurans} SCOP: c.94.1.1
Probab=29.22 E-value=71 Score=26.28 Aligned_cols=50 Identities=12% Similarity=0.034 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCcee-C----------HHHHHHcCCceEecC
Q 028125 145 DELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF-G----------SQEALEYGLIDRIIR 195 (213)
Q Consensus 145 ~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~-s----------a~EA~~~GLiD~I~~ 195 (213)
++.....+...+.+++.+|++++.++..+.+-.|- + .+.+ +.|++..-.+
T Consensus 228 ~~~~~~~~e~~~~~a~~~gl~~~~i~~yl~~~~~~l~~~~~~~l~~~~~~~-~~glip~~~d 288 (301)
T 2i6e_A 228 RRGIGHLAEVSQRHAEKLGLPERVVQHYLWNFRYHLEAPDRLGLREFADLA-VPGHAELTFG 288 (301)
T ss_dssp HHHHHTHHHHHHHHHHTTTCCHHHHHHHHHTCBCSCCHHHHHHHHHHHHHH-STTCCCCCC-
T ss_pred HHHHHCHHHHHHHHHHHcCCCHHHHHHHHHhCeeCCCHHHHHHHHHHHHHH-hcCCCCCCCC
Confidence 34444456688899999999999998877543332 2 2335 6788765443
No 137
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A
Probab=28.84 E-value=72 Score=21.45 Aligned_cols=37 Identities=3% Similarity=0.134 Sum_probs=25.6
Q ss_pred cEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEE
Q 028125 32 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 68 (213)
Q Consensus 32 ~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~I 68 (213)
.++.+.|+++-..+..+.+.+..+-...+.+.+.|.+
T Consensus 14 ~vv~l~G~l~~~~~~~l~~~l~~~~~~~~~~~vvlDl 50 (116)
T 1th8_B 14 LIVRLSGELDHHTAEELREQVTDVLENRAIRHIVLNL 50 (116)
T ss_dssp EEEEEEEEESHHHHHHHHHHHHHHHHSSCCCEEEEEE
T ss_pred EEEEEeeeeccccHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 5688999999998888888887543332244555544
No 138
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=28.37 E-value=58 Score=24.72 Aligned_cols=48 Identities=13% Similarity=0.224 Sum_probs=33.1
Q ss_pred HHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccc
Q 028125 47 QILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF 99 (213)
Q Consensus 47 ~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~ 99 (213)
.+++.|... .++.+.|. || ||+..-.+.+|.|+|...+.|++=+=...
T Consensus 62 eLId~Ih~a--~~~~dgii--IN-pgA~THtSvAlrDAl~~~~~P~VEVHiSN 109 (153)
T 3lwz_A 62 ALIDSIHQA--RGNTDFIL--IN-PAAFTHTSVALRDALLGVQIPFIEIHLSN 109 (153)
T ss_dssp HHHHHHHHH--TTTCSEEE--EE-CGGGGGTCHHHHHHHHHHTCCEEEEESSC
T ss_pred HHHHHHHHh--hhcCceEE--Ec-cccceechHHHHHHHHhcCCCEEEEEcCC
Confidence 455656543 23345544 44 99999999999999999999977655443
No 139
>2nxo_A Hypothetical protein SCO4506; PFAM, DUF178, NYSGXRC, 10093F, PSI-2, structural genomics, protein structure initiative; 2.04A {Streptomyces coelicolor} SCOP: c.94.1.1
Probab=28.21 E-value=50 Score=26.67 Aligned_cols=47 Identities=9% Similarity=0.082 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHhcCCce-eCH----------HHHHHcCCceEecC
Q 028125 149 RVRDYIFKELSRKTGQPFEKITKDLSRIKR-FGS----------QEALEYGLIDRIIR 195 (213)
Q Consensus 149 ~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~-~sa----------~EA~~~GLiD~I~~ 195 (213)
...+...+.+++.++++.+.+...+..-.| ++. +.+.+.|++++...
T Consensus 220 ~~p~ea~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gli~~~~~ 277 (291)
T 2nxo_A 220 EEVEKVAEQAARWEAFDEDTLAKYFTTLDFRFGAPQLEAVTEFARRVGPTTGFPADVK 277 (291)
T ss_dssp HTHHHHHHHHHTTSSSCHHHHHHHHHHSBCCCSHHHHHHHHHHHHHHSTTTTSCTTCC
T ss_pred HCHHHHHHHHHHHcCCCHHHHHHHHHhCccCCCHHHHHHHHHHHHHHHHCCCCCCCCc
Confidence 334456678888899999988877643222 332 22445788875443
No 140
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=27.04 E-value=86 Score=21.31 Aligned_cols=27 Identities=19% Similarity=0.162 Sum_probs=21.9
Q ss_pred CcEEEEccccCcchHHHHHHHHHhhcc
Q 028125 31 ERVIFIGQNIDEEFSNQILATMLYLDS 57 (213)
Q Consensus 31 ~~iI~i~G~I~~~~~~~l~~~l~~l~~ 57 (213)
..++.+.|+++-..+..+.+.+..+-.
T Consensus 14 ~~v~~l~G~ld~~~~~~l~~~l~~~~~ 40 (117)
T 4hyl_A 14 IDIITLHGHLDTRSSPAVQAAVLPRVT 40 (117)
T ss_dssp EEEEEEEEEECSSSHHHHHHHHGGGCC
T ss_pred EEEEEEEeEEcchhHHHHHHHHHHHHc
Confidence 356889999999999999998876543
No 141
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A
Probab=26.65 E-value=69 Score=21.74 Aligned_cols=37 Identities=16% Similarity=0.016 Sum_probs=25.6
Q ss_pred cEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEE
Q 028125 32 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 68 (213)
Q Consensus 32 ~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~I 68 (213)
.++.+.|+++-.++..+.+.+..+......+.+.|.+
T Consensus 13 ~vl~l~G~l~~~~~~~l~~~l~~~~~~~~~~~vvlDl 49 (117)
T 1h4x_A 13 VVIRLFGELDHHAVEQIRAKISTAIFQGAVTTIIWNF 49 (117)
T ss_dssp EEEEEEEEECHHHHHHHHHHHHHHHHHTSCSEEEEEE
T ss_pred EEEEEEeEEchhhHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 5688999999998888888877543322345565544
No 142
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=26.32 E-value=82 Score=23.75 Aligned_cols=50 Identities=16% Similarity=0.207 Sum_probs=35.2
Q ss_pred HHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccc
Q 028125 46 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF 99 (213)
Q Consensus 46 ~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~ 99 (213)
..+++.|..... +..+.|. || ||+..-.+.+|.|+|...+.|++=+=...
T Consensus 53 geLId~Ih~a~~-~~~dgiI--IN-pgA~THtSvAlrDAl~~v~~P~VEVHiSN 102 (149)
T 2uyg_A 53 GQLIEWVQQAHQ-EGFLAIV--LN-PGALTHYSYALLDAIRAQPLPVVEVHLTN 102 (149)
T ss_dssp HHHHHHHHHTTT-TTCSEEE--EE-CGGGGGTCHHHHHHHHTSCSCEEEEESSC
T ss_pred HHHHHHHHHhcc-CCeeEEE--Ec-cchhccccHHHHHHHHhCCCCEEEEEecC
Confidence 356777764421 1144444 44 99999999999999999999977655443
No 143
>3ksx_A Nitrate transport protein; SSUA, alkanesulfonate-binding protein, periplasmic-binding P transport protein; HET: MPO; 1.70A {Xanthomonas axonopodis PV} PDB: 3e4r_A* 3ksj_A*
Probab=25.42 E-value=2.2e+02 Score=22.76 Aligned_cols=54 Identities=19% Similarity=0.186 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHhc-CCce----eCH----------HHHHHcCCceEecCCcccc
Q 028125 147 LLRVRDYIFKELSRKTGQPFEKITKDLS-RIKR----FGS----------QEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 147 l~~~~~~~~~~~a~~tg~~~~~i~~~~~-~~~~----~sa----------~EA~~~GLiD~I~~~~~~~ 200 (213)
+....+...+++++..+++.+.+.+.+. ...| ++. +...+.|+++.-...++..
T Consensus 242 ~~~~p~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gli~~~~~~~~~~ 310 (324)
T 3ksx_A 242 LERDRAGSIKTLAQVSGLPPAVVERTLAHRPPASVQPLSAQVIKAQQATADLFYAQRLLPKRVLVAPAV 310 (324)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCCBCCCHHHHHHHHHHHHHHHHTTSSSSCCCCGGGB
T ss_pred HHHCHHHHHHHHHHHHCcCHHHHHHHHhhcCcCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCcHHHhe
Confidence 3333455677888889999999888776 3222 333 4566789998766655543
No 144
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=25.32 E-value=1.3e+02 Score=22.19 Aligned_cols=63 Identities=16% Similarity=0.162 Sum_probs=30.5
Q ss_pred cEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHH-HHHHhcCCCeEEEEcccc
Q 028125 32 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY-DTMQSLKSPVGTHCVGFA 100 (213)
Q Consensus 32 ~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~-~~i~~~~~~v~t~~~G~a 100 (213)
+|++|+.-|+......+.+.|. + ...+.-...|-|.........+ ..+...+..++.+..|..
T Consensus 22 rVl~iGDSit~G~~~~l~~~l~-----~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~pd~Vvi~~G~N 85 (200)
T 4h08_A 22 HVLLIGNSITRGYYGKVEAALK-----E-KAYVGRLSNSKSVGDPALIEELAVVLKNTKFDVIHFNNGLH 85 (200)
T ss_dssp EEEEEESHHHHHHHHHHHHHTT-----T-TCEEEEEEESCCTTCHHHHHHHHHHHHHSCCSEEEECCCSS
T ss_pred eEEEEchhHHhhhHHHHHHHhc-----c-CCeEEEEeccCCccHHHHHHHHHHHHhcCCCCeEEEEeeeC
Confidence 6888876666554333333321 1 2223333333333333333433 344555566777766664
No 145
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=25.01 E-value=1.9e+02 Score=20.61 Aligned_cols=91 Identities=18% Similarity=0.145 Sum_probs=49.6
Q ss_pred eeeecCCCCCCchhhhHHhhcc--CcEEEEccccCcchHHHHHHHHHh-hccCCCCCceEEEEeCCCCChhHHHHHHHHH
Q 028125 9 VLYRTPGEGSWQWVDLWNALYR--ERVIFIGQNIDEEFSNQILATMLY-LDSVDDSKRVYMYINGPGGDVTPTLAIYDTM 85 (213)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~--~~iI~i~G~I~~~~~~~l~~~l~~-l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i 85 (213)
+-.-+||.-..--.+..++++. +.+..++.+.++.. +.+.+++.. ++..+..++|.+..+-.||++.... ...+
T Consensus 4 iii~sHG~~A~gl~~~~~~i~G~~~~v~ai~~~~~~~~-~~~~~~i~~~i~~~~~~~gvliLtDl~GGSp~n~a--~~~~ 80 (135)
T 1pdo_A 4 IVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENA-ETLIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAA--SRIV 80 (135)
T ss_dssp EEEECSBTHHHHHHHHHHHHHCCCSSEEEECBCTTCCH-HHHHHHHHHHHTTSCCTTCEEEEESSTTSHHHHHH--HHHH
T ss_pred EEEEeChHHHHHHHHHHHHHcCCcCCEEEEEeeCCCCH-HHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHH--HHHH
Confidence 4455667422222344445543 57888888776643 223333332 3333445789999999999976652 1222
Q ss_pred HhcCCCeEEEEccccchHH
Q 028125 86 QSLKSPVGTHCVGFAYHLA 104 (213)
Q Consensus 86 ~~~~~~v~t~~~G~aaSaa 104 (213)
.. ..+ +.++.|....+.
T Consensus 81 ~~-~~~-v~vi~GvNlpml 97 (135)
T 1pdo_A 81 VD-KEH-YEVIAGVNIPML 97 (135)
T ss_dssp TT-CTT-EEEEESCCHHHH
T ss_pred hc-cCC-EEEEeCCCHHHH
Confidence 22 224 345556665544
No 146
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A
Probab=24.26 E-value=1.2e+02 Score=19.94 Aligned_cols=37 Identities=14% Similarity=0.227 Sum_probs=25.3
Q ss_pred cEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEE
Q 028125 32 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 68 (213)
Q Consensus 32 ~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~I 68 (213)
.++.+.|+++-..+..+.+.+..+-.....+.+.|.+
T Consensus 15 ~vv~l~G~l~~~~~~~l~~~l~~~~~~~~~~~vvlDl 51 (110)
T 1sbo_A 15 AIVRVQGDIDAYNSSELKEQLRNFISTTSKKKIVLDL 51 (110)
T ss_dssp EEEEEESCBSTTTTTHHHHHHHTHHHHCSCSEEEEEC
T ss_pred EEEEEeeEEccccHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 5688999999988888888877543333224555544
No 147
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=24.07 E-value=1.8e+02 Score=25.00 Aligned_cols=61 Identities=23% Similarity=0.195 Sum_probs=37.4
Q ss_pred HHHHHHHHhhccCCCCCceEEEEeCCCCCh---hHHHHHHHHHHh--cCCCeEEEEccccchHHHHHH
Q 028125 46 NQILATMLYLDSVDDSKRVYMYINGPGGDV---TPTLAIYDTMQS--LKSPVGTHCVGFAYHLAGFLL 108 (213)
Q Consensus 46 ~~l~~~l~~l~~~~~~~~I~l~INSpGG~v---~~~~~I~~~i~~--~~~~v~t~~~G~aaSaa~~I~ 108 (213)
+.+...++.+-.+++.+.|.+.| .||-+ .-+..|.++++. .++|+++...|.-.--|-=++
T Consensus 296 ~~~~~~~~~il~d~~v~~ilvni--~ggi~~~~~vA~gii~a~~~~~~~~pivvrl~G~n~~~g~~~l 361 (388)
T 2nu8_B 296 ERVTEAFKIILSDDKVKAVLVNI--FGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKL 361 (388)
T ss_dssp HHHHHHHHHHHTSTTCCEEEEEE--ESCSSCHHHHHHHHHHHHHHHTCCSCEEEEEESTTHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEEe--cCCcCCchHHHHHHHHHHHhcCCCCeEEEEeCCCCHHHHHHHH
Confidence 44444444444556677777655 46643 335667778877 678888877777665554444
No 148
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=23.77 E-value=86 Score=24.31 Aligned_cols=49 Identities=20% Similarity=0.235 Sum_probs=33.8
Q ss_pred HHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccc
Q 028125 47 QILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF 99 (213)
Q Consensus 47 ~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~ 99 (213)
.+++.|..... +..+.|+ || ||+..-.+.+|.|+|.....|++=+=...
T Consensus 66 eLId~Ih~a~~-~~~dgII--IN-pgAyTHtSvAlrDAl~~v~~P~VEVHiSN 114 (176)
T 2c4w_A 66 EIIDKIQESVG-SEYEGII--IN-PGAFSHTSIAIADAIMLAGKPVIEVHLTN 114 (176)
T ss_dssp HHHHHHHHHHS-SSCCEEE--EE-CGGGGGTCHHHHHHHHTSSSCEEEEESSC
T ss_pred HHHHHHHHhcc-CCeeEEE--EC-cchhccchHHHHHHHHhCCCCEEEEEecC
Confidence 46666664421 2244444 44 99999999999999999999977655444
No 149
>2x26_A Periplasmic aliphatic sulphonates-binding protein; transport protein; 1.75A {Escherichia coli}
Probab=23.08 E-value=2.7e+02 Score=21.88 Aligned_cols=53 Identities=13% Similarity=0.080 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCCCHHHHHHHhcCCc-e----eCH----------HHHHHcCCceEecCCccccccCC
Q 028125 152 DYIFKELSRKTGQPFEKITKDLSRIK-R----FGS----------QEALEYGLIDRIIRPPRIKEDMP 204 (213)
Q Consensus 152 ~~~~~~~a~~tg~~~~~i~~~~~~~~-~----~sa----------~EA~~~GLiD~I~~~~~~~~~~~ 204 (213)
+...+++++..+++.+.+...+.... | ++. +..++.|+++.-...++.....+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~ 288 (308)
T 2x26_A 221 EQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPT 288 (308)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHTCCCCCCBCCCHHHHHHHHHHHHHHHHTTSSSSCCCGGGGBCCCC
T ss_pred HHHHHHHHHHhCcCHHHHHHHHhccCccCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHhhcccc
Confidence 35667788888999988887764322 2 222 34568899987665555443333
No 150
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=22.86 E-value=1.4e+02 Score=23.63 Aligned_cols=15 Identities=0% Similarity=-0.230 Sum_probs=7.8
Q ss_pred CCCCchhhhHHhhcc
Q 028125 16 EGSWQWVDLWNALYR 30 (213)
Q Consensus 16 ~~~~~~~~~~~~~~~ 30 (213)
.....|-.+...|-+
T Consensus 17 ~~~~~~~~l~~~L~~ 31 (249)
T 3fle_A 17 GSERSETFMVKQALN 31 (249)
T ss_dssp CCGGGTHHHHHHHHT
T ss_pred CChhHHHHHHHHHHH
Confidence 333556666665543
No 151
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=22.73 E-value=2.8e+02 Score=24.21 Aligned_cols=63 Identities=10% Similarity=-0.069 Sum_probs=38.9
Q ss_pred CcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeC--CCCC--hhHHHHHHHHHHh--cCCCeEEEE
Q 028125 31 ERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYING--PGGD--VTPTLAIYDTMQS--LKSPVGTHC 96 (213)
Q Consensus 31 ~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INS--pGG~--v~~~~~I~~~i~~--~~~~v~t~~ 96 (213)
.+-|-+.|..+++..... +..+-+++..+.|.+.+.- .||. -..+..+.++++. .++|+++..
T Consensus 342 ~NPlDl~g~a~~~~~~~a---l~~~l~dp~vd~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~ 410 (457)
T 2csu_A 342 KNPVDMIASARGEDYYRT---AKLLLQDPNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMF 410 (457)
T ss_dssp SSEEECCTTCCHHHHHHH---HHHHHHSTTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEE
T ss_pred CCCeeCCCCCCHHHHHHH---HHHHhcCCCCCEEEEEccccccccCCchhHHHHHHHHHHHhcCCCCEEEEe
Confidence 355667777666544444 4433455667777776643 3333 2456788888887 668888743
No 152
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=22.68 E-value=1.3e+02 Score=26.10 Aligned_cols=16 Identities=13% Similarity=0.061 Sum_probs=13.2
Q ss_pred CCCCCeeeeecCCCCC
Q 028125 3 PIGTPKVLYRTPGEGS 18 (213)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (213)
|-|+|+||+.+||-+.
T Consensus 146 ~~~~pVi~v~t~gf~g 161 (437)
T 3aek_A 146 APHVRVYSYTGSGLDT 161 (437)
T ss_dssp TTTCEEEEEECCTTTC
T ss_pred CCCCeEEEeECCCCCC
Confidence 4589999999999654
No 153
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=22.67 E-value=1.1e+02 Score=17.96 Aligned_cols=32 Identities=13% Similarity=0.019 Sum_probs=22.4
Q ss_pred HHHHHHHhCCCHHHHHHHhcCCceeCHHHHHH
Q 028125 155 FKELSRKTGQPFEKITKDLSRIKRFGSQEALE 186 (213)
Q Consensus 155 ~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~ 186 (213)
..-+++..|.+...+..+.......+.+.+.+
T Consensus 21 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ 52 (68)
T 2r1j_L 21 QAALGKMVGVSNVAISQWERSETEPNGENLLA 52 (68)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCBHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHH
Confidence 45578888999888888777655556655443
No 154
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=22.02 E-value=2.3e+02 Score=20.41 Aligned_cols=92 Identities=9% Similarity=0.064 Sum_probs=50.6
Q ss_pred eeeeecCCCCCCchhhhHHhhcc--CcEEEEccccCcch---HHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHH
Q 028125 8 KVLYRTPGEGSWQWVDLWNALYR--ERVIFIGQNIDEEF---SNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 82 (213)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~--~~iI~i~G~I~~~~---~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~ 82 (213)
++-.-+||.-..--.+..++++. +.+..++.+.++.. .+.+.+.+..+ +. ++|.+..+-.||++.... .
T Consensus 7 ~iiivsHG~~A~gl~~~~~~i~G~~~~i~ai~~~~~~~~~~~~~~i~~~i~~~---~~-~gvliLtDl~GGSp~n~a--~ 80 (142)
T 3bed_A 7 KLILMSHGRMAEETLASTQMIVGELADAAIVSMTAEDGLSGTQAKLAAILKEA---GN-VPTLVLADLXGGTPCNVA--M 80 (142)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHCTTCCCEEEEECTTTHHHHHHHHHHHHHHHH---CS-CCEEEEESSTTSHHHHHH--H
T ss_pred cEEEEcChHHHHHHHHHHHHHcCCCCCEEEEEecCCCCHHHHHHHHHHHHHhc---CC-CCEEEEEECCCCHHHHHH--H
Confidence 45566777422223344445544 57778887776542 33444444333 44 689999999999976652 1
Q ss_pred HHHHhcCCCeEEEEccccchHHHHH
Q 028125 83 DTMQSLKSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 83 ~~i~~~~~~v~t~~~G~aaSaa~~I 107 (213)
..+.. ..+ +-++.|....+.-=+
T Consensus 81 ~~~~~-~~~-v~vi~GvNlpmlle~ 103 (142)
T 3bed_A 81 MAMGT-YPQ-LRVVAGLNLAMAIEA 103 (142)
T ss_dssp HHTTT-CTT-EEEEESCCHHHHHHH
T ss_pred HHhcc-CCC-EEEEeCCCHHHHHHH
Confidence 11121 223 345556665554333
No 155
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=21.66 E-value=82 Score=23.68 Aligned_cols=48 Identities=21% Similarity=0.290 Sum_probs=33.8
Q ss_pred HHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccc
Q 028125 47 QILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF 99 (213)
Q Consensus 47 ~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~ 99 (213)
.+++.|..... +.+.|.| | ||+..-.+.+|.|+|...+.|++=+=...
T Consensus 57 eLId~Ih~a~~--~~dgiiI--N-pgA~THtSvAlrDAl~~v~~P~VEVHiSN 104 (146)
T 1h05_A 57 QLLDWIHQAAD--AAEPVIL--N-AGGLTHTSVALRDACAELSAPLIEVHISN 104 (146)
T ss_dssp HHHHHHHHHHH--HTCCEEE--E-CGGGGGTCHHHHHHHHTCCSCEEEEESSC
T ss_pred HHHHHHHHhhh--cCcEEEE--C-chhhccccHHHHHHHHhCCCCEEEEEecC
Confidence 45666654422 2445544 4 99999999999999999999977655443
No 156
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=21.59 E-value=75 Score=22.28 Aligned_cols=38 Identities=8% Similarity=-0.090 Sum_probs=26.8
Q ss_pred cCcEEEEccccCcchHHHHHHHHHhhccCC--CCCceEEE
Q 028125 30 RERVIFIGQNIDEEFSNQILATMLYLDSVD--DSKRVYMY 67 (213)
Q Consensus 30 ~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~--~~~~I~l~ 67 (213)
+..++.+.|+++-.++..+.+.+..+..+. ..+.|+|.
T Consensus 15 ~v~v~~l~G~L~f~~a~~~~~~l~~~~~~~~~~~~~vvlD 54 (130)
T 2kln_A 15 GLVVYRYDAPLCFANAEDFRRRALTVVDQDPGQVEWFVLN 54 (130)
T ss_dssp SEEEEECCSCCBTTTHHHHHHHHHHHTTSSSSCCEEEEEE
T ss_pred CEEEEEECCceEechHHHHHHHHHHHHhcCCCCceEEEEE
Confidence 346778999999999999999988654332 23445444
No 157
>1adr_A P22 C2 repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.35.1.2
Probab=21.58 E-value=1.2e+02 Score=18.36 Aligned_cols=32 Identities=13% Similarity=0.019 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCHHHHHHHhcCCceeCHHHHHH
Q 028125 155 FKELSRKTGQPFEKITKDLSRIKRFGSQEALE 186 (213)
Q Consensus 155 ~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~ 186 (213)
..-+++..|.+...+..+.......+.+.+.+
T Consensus 21 ~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ 52 (76)
T 1adr_A 21 QAALGKMVGVSNVAISQWERSETEPNGENLLA 52 (76)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHH
Confidence 45578888898888888777656566665543
No 158
>3kip_A 3-dehydroquinase, type II; lyase; 2.95A {Candida albicans}
Probab=21.38 E-value=85 Score=24.11 Aligned_cols=29 Identities=14% Similarity=0.146 Sum_probs=23.8
Q ss_pred CCCChhHHHHHHHHHHhcCCCeEEEEccc
Q 028125 71 PGGDVTPTLAIYDTMQSLKSPVGTHCVGF 99 (213)
Q Consensus 71 pGG~v~~~~~I~~~i~~~~~~v~t~~~G~ 99 (213)
||+..-.+.+|.|+|...+.|++=+=...
T Consensus 91 pgAyTHtSvAlrDAL~~v~~P~VEVHiSN 119 (167)
T 3kip_A 91 AGAYTHTSVGIRDALLGTAIPFIEVHITN 119 (167)
T ss_dssp CGGGGGTCHHHHHHHHHTTCCEEEEESSC
T ss_pred cccceeccHHHHHHHHhcCCCEEEEEcCC
Confidence 89988899999999999998877655443
No 159
>2k9q_A Uncharacterized protein; all helix, helix-turn-helix, plasmid, structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=20.99 E-value=1.2e+02 Score=18.82 Aligned_cols=31 Identities=6% Similarity=-0.045 Sum_probs=21.3
Q ss_pred HHHHHHHhCCCHHHHHHHhcCCceeCHHHHH
Q 028125 155 FKELSRKTGQPFEKITKDLSRIKRFGSQEAL 185 (213)
Q Consensus 155 ~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~ 185 (213)
.+-+|+.+|++...+.++.......+.+.+.
T Consensus 18 q~~lA~~~gis~~~i~~~e~g~~~p~~~~l~ 48 (77)
T 2k9q_A 18 AKSVAEEMGISRQQLCNIEQSETAPVVVKYI 48 (77)
T ss_dssp HHHHHHHHTSCHHHHHHHHTCCSCCHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHcCCCCCCHHHHH
Confidence 3557888888888888877665555555443
No 160
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=20.77 E-value=2.1e+02 Score=19.59 Aligned_cols=78 Identities=9% Similarity=-0.001 Sum_probs=53.3
Q ss_pred cEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEe-CCCCChhHHHHHHHHHHhcCCCeEEEEccccchHHHHHHhc
Q 028125 32 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYIN-GPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAG 110 (213)
Q Consensus 32 ~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN-SpGG~v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I~~a 110 (213)
.++.+.|+++-.+++.+.+++..+. +..+.|.|.+. -+-=+.+....+.+..+.++..+..++.|......-.+-.+
T Consensus 19 ~v~~l~G~L~f~~a~~l~~~l~~~~--~~~~~vilDl~~v~~iDssgl~~L~~~~~~~~~g~~l~l~~~~~~v~~~l~~~ 96 (118)
T 3ny7_A 19 LVLRVIGPLFFAAAEGLFTDLESRL--EGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEFQPLRTMARA 96 (118)
T ss_dssp EEEEEESCBCHHHHHHHHHHHHTTC--TTCSEEEEEEEECCCBCHHHHHHHHHHHHHCCTTCEEEEECCCHHHHHHHHHT
T ss_pred EEEEEeceeEehhHHHHHHHHHHhc--CCCcEEEEEcCCCCeecHHHHHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHc
Confidence 5677999999999999999987653 34567777773 34345566666777777765555666666666655555555
Q ss_pred C
Q 028125 111 G 111 (213)
Q Consensus 111 g 111 (213)
|
T Consensus 97 g 97 (118)
T 3ny7_A 97 G 97 (118)
T ss_dssp T
T ss_pred C
Confidence 5
No 161
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=20.31 E-value=86 Score=23.93 Aligned_cols=34 Identities=18% Similarity=0.637 Sum_probs=22.4
Q ss_pred CceEEEEeCCC-CChhHHHHH------HHHHHhcCCCeEEEEccc
Q 028125 62 KRVYMYINGPG-GDVTPTLAI------YDTMQSLKSPVGTHCVGF 99 (213)
Q Consensus 62 ~~I~l~INSpG-G~v~~~~~I------~~~i~~~~~~v~t~~~G~ 99 (213)
+.|.| || |+..++... ...++..+.||..+|.|+
T Consensus 42 D~lil----PG~g~~~~~~~~~~~~~~i~~~~~~~~PvlGIClG~ 82 (211)
T 4gud_A 42 DKLFL----PGVGTASEAMKNLTERDLIELVKRVEKPLLGICLGM 82 (211)
T ss_dssp SEEEE----CCCSCHHHHHHHHHHTTCHHHHHHCCSCEEEETHHH
T ss_pred CEEEE----CCCCCHHHHHHHHHhcChHHHHHHcCCCEEEEchhH
Confidence 45555 77 666555432 355666789999999876
No 162
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=20.30 E-value=1.6e+02 Score=23.98 Aligned_cols=53 Identities=13% Similarity=0.201 Sum_probs=34.9
Q ss_pred HHHHHHHHHhhccCCCCC-ceEEEEeCCC--------CChhHHHHHHHHHHhc-CCCeEEEEcc
Q 028125 45 SNQILATMLYLDSVDDSK-RVYMYINGPG--------GDVTPTLAIYDTMQSL-KSPVGTHCVG 98 (213)
Q Consensus 45 ~~~l~~~l~~l~~~~~~~-~I~l~INSpG--------G~v~~~~~I~~~i~~~-~~~v~t~~~G 98 (213)
.+.+.+....+... ..+ .|.|.++||- ++......+...++.. +.||.+-+..
T Consensus 105 ~~~~~~~a~~~~~~-g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~ 167 (311)
T 1jub_A 105 AAENIAMLKKIQES-DFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPP 167 (311)
T ss_dssp HHHHHHHHHHHHHS-CCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECC
T ss_pred HHHHHHHHHHHHhc-CCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 34455555545443 357 7999998773 4666667888888875 5788776543
No 163
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=20.02 E-value=1.4e+02 Score=25.88 Aligned_cols=42 Identities=5% Similarity=-0.039 Sum_probs=21.8
Q ss_pred CCceEEEEeCCCCChhHHH-HHHHHHHhcC--CCeEEEEccccch
Q 028125 61 SKRVYMYINGPGGDVTPTL-AIYDTMQSLK--SPVGTHCVGFAYH 102 (213)
Q Consensus 61 ~~~I~l~INSpGG~v~~~~-~I~~~i~~~~--~~v~t~~~G~aaS 102 (213)
.+.|.|=--|.+|.+.+-+ .+...++... .+..++......|
T Consensus 320 ~~~ivlGspT~~~~~~p~~~~~l~~l~~~~~~~K~~~~FGSyGWs 364 (410)
T 4dik_A 320 SEALIFGVSTYEAEIHPLMRFTLLEIIDKANYEKPVLVFGVHGWA 364 (410)
T ss_dssp CSEEEEEECCTTSSSCHHHHHHHHHHHHHCCCCCEEEEEEECCCC
T ss_pred CCeEEEEeCCcCCcCCHHHHHHHHHHHhcccCCCEEEEEECCCCC
Confidence 5567776666677765543 3444444432 3444444433333
Done!