Query 028125
Match_columns 213
No_of_seqs 135 out of 1234
Neff 7.4
Searched_HMMs 13730
Date Mon Mar 25 10:32:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028125.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/028125hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tg6a1 c.14.1.1 (A:1-193) Clp 100.0 8.2E-52 6E-56 336.4 21.2 191 7-197 1-192 (193)
2 d1y7oa1 c.14.1.1 (A:2-193) Clp 100.0 1.1E-50 8.2E-55 329.5 18.2 188 6-196 1-191 (192)
3 d1yg6a1 c.14.1.1 (A:11-193) Cl 100.0 1.6E-48 1.1E-52 314.4 18.9 181 14-197 2-182 (183)
4 d2cbya1 c.14.1.1 (A:15-193) Cl 100.0 2.3E-48 1.7E-52 312.5 18.5 174 23-196 5-178 (179)
5 d2f6ia1 c.14.1.1 (A:177-366) C 100.0 9.2E-47 6.7E-51 305.8 19.0 179 21-200 8-186 (190)
6 d2f6qa1 c.14.1.3 (A:108-352) P 99.0 5.6E-09 4.1E-13 85.1 14.1 147 32-200 14-190 (245)
7 d1uiya_ c.14.1.3 (A:) Enoyl-Co 98.9 1.1E-08 7.7E-13 83.3 14.1 149 32-200 10-185 (253)
8 d1hzda_ c.14.1.3 (A:) AUH prot 98.9 1.1E-08 8.3E-13 84.2 14.2 149 32-199 17-190 (266)
9 d2a7ka1 c.14.1.3 (A:1-230) Car 98.9 1.4E-08 1E-12 82.0 13.4 147 32-200 11-185 (230)
10 d1wz8a1 c.14.1.3 (A:2-264) Pro 98.8 9.7E-09 7E-13 84.5 11.4 142 40-200 33-195 (263)
11 d1wdka4 c.14.1.3 (A:1-310) Fat 98.8 1.8E-08 1.3E-12 84.9 12.9 139 40-200 32-195 (310)
12 d1dcia_ c.14.1.3 (A:) Dienoyl- 98.8 2.3E-08 1.7E-12 82.3 12.8 141 40-198 28-198 (275)
13 d1nzya_ c.14.1.3 (A:) 4-Chloro 98.8 5.3E-09 3.8E-13 86.3 7.8 147 32-199 14-191 (269)
14 d1pjha_ c.14.1.3 (A:) Dienoyl- 98.8 3.1E-08 2.3E-12 81.3 12.3 138 40-199 29-200 (266)
15 d1q52a_ c.14.1.3 (A:) Naphthoa 98.7 3.3E-08 2.4E-12 82.5 11.6 150 30-200 27-223 (297)
16 d1mj3a_ c.14.1.3 (A:) Enoyl-Co 98.7 7.3E-09 5.3E-13 84.6 7.2 145 32-200 18-189 (260)
17 d1sg4a1 c.14.1.3 (A:2-250) Die 98.7 2.6E-08 1.9E-12 81.3 10.0 151 33-200 16-190 (249)
18 d2fw2a1 c.14.1.3 (A:3-260) Chr 98.7 9E-08 6.6E-12 78.3 12.0 138 40-200 27-190 (258)
19 d1ef8a_ c.14.1.3 (A:) Methylma 98.7 6.2E-08 4.5E-12 79.4 11.0 148 32-200 15-188 (261)
20 d1szoa_ c.14.1.3 (A:) 6-oxo ca 98.6 1.1E-07 7.9E-12 77.5 11.2 146 31-199 23-196 (249)
21 d2f9ya1 c.14.1.4 (A:4-319) Ace 98.5 2E-07 1.5E-11 78.6 9.1 129 38-197 130-268 (316)
22 d1vrga2 c.14.1.4 (A:252-515) P 98.3 1.5E-06 1.1E-10 71.6 9.4 89 38-130 81-183 (264)
23 d1on3a2 c.14.1.4 (A:261-524) M 98.2 3.9E-06 2.9E-10 68.9 9.2 144 37-198 80-235 (264)
24 d1pixa3 c.14.1.4 (A:288-586) G 98.1 3.6E-06 2.7E-10 70.3 7.8 74 35-110 94-177 (299)
25 d1xnya2 c.14.1.4 (A:268-530) P 98.0 9.1E-06 6.6E-10 66.6 8.3 91 38-130 79-181 (263)
26 d2a7sa2 c.14.1.4 (A:278-548) P 98.0 2.4E-06 1.8E-10 70.5 4.4 91 38-130 84-186 (271)
27 d1uyra2 c.14.1.4 (A:1815-2218) 97.0 0.0012 8.9E-08 56.4 9.2 93 37-131 107-215 (404)
28 d1pixa2 c.14.1.4 (A:1-287) Glu 96.8 0.0017 1.2E-07 53.3 8.1 90 38-131 118-220 (287)
29 d1on3a1 c.14.1.4 (A:8-260) Met 95.0 0.013 9.6E-07 46.9 5.0 86 40-129 105-199 (253)
30 d1xnya1 c.14.1.4 (A:10-267) Pr 94.7 0.015 1.1E-06 46.5 4.8 84 44-130 108-200 (258)
31 d2f9yb1 c.14.1.4 (B:23-285) Ac 94.7 0.025 1.8E-06 45.3 6.0 82 44-129 116-208 (263)
32 d1vrga1 c.14.1.4 (A:1-251) Pro 93.1 0.044 3.2E-06 43.6 4.6 81 44-128 106-196 (251)
33 d2a7sa1 c.14.1.4 (A:20-277) Pr 92.6 0.086 6.3E-06 42.0 5.7 82 44-129 109-200 (258)
34 d1fc6a4 c.14.1.2 (A:78-156,A:2 88.5 0.48 3.5E-05 37.8 6.7 81 30-111 105-212 (294)
35 d1uyra1 c.14.1.4 (A:1482-1814) 76.4 4 0.00029 33.1 7.6 39 90-130 241-279 (333)
36 d1vc1a_ c.13.2.1 (A:) Anti-sig 62.7 16 0.0012 23.4 8.1 81 30-110 13-95 (110)
37 d2csua2 c.23.4.1 (A:130-290) A 56.4 20 0.0015 25.3 7.3 65 32-102 49-113 (161)
38 d1th8b_ c.13.2.1 (B:) Anti-sig 45.2 13 0.00093 24.1 4.3 38 32-69 13-50 (115)
39 d1h4xa_ c.13.2.1 (A:) Anti-sig 44.1 11 0.00083 24.3 3.8 37 32-68 12-48 (111)
40 d1oi7a2 c.23.4.1 (A:122-288) S 41.8 20 0.0014 25.4 5.1 50 49-102 67-118 (167)
41 d1k32a4 c.14.1.2 (A:680-762,A: 41.0 46 0.0034 25.3 7.8 78 29-111 105-204 (291)
42 d1gqoa_ c.23.13.1 (A:) Type II 40.3 14 0.001 25.9 4.0 49 46-99 54-102 (141)
43 d2c4va1 c.23.13.1 (A:1-158) Ty 36.6 20 0.0015 25.5 4.4 49 46-98 56-104 (158)
44 d1j7xa_ c.14.1.2 (A:) Interpho 36.0 21 0.0015 27.8 4.9 51 59-109 138-222 (302)
45 d1vmea1 c.23.5.1 (A:251-398) R 34.6 50 0.0036 21.9 6.3 11 64-74 61-71 (148)
46 d1uqra_ c.23.13.1 (A:) Type II 32.6 32 0.0023 24.1 4.8 49 46-99 55-103 (146)
47 d1xkla_ c.69.1.20 (A:) Salicyl 29.6 49 0.0035 22.3 5.6 73 5-77 2-86 (258)
48 d1euca2 c.23.4.1 (A:131-306) S 29.3 58 0.0042 22.9 6.0 54 48-101 66-121 (176)
49 d1k9vf_ c.23.16.1 (F:) GAT sub 28.6 24 0.0017 25.1 3.7 35 61-99 43-87 (200)
50 d1nexa1 a.157.1.1 (A:116-185) 27.5 49 0.0036 19.9 4.5 37 150-186 31-68 (70)
51 d2nu7b1 c.23.4.1 (B:239-388) S 26.6 94 0.0069 21.5 6.6 70 36-110 51-125 (150)
52 d1va4a_ c.69.1.12 (A:) Arylest 25.8 63 0.0046 22.2 5.7 8 32-39 21-28 (271)
53 d1jmkc_ c.69.1.22 (C:) Surfact 25.8 92 0.0067 21.1 7.6 78 11-93 21-100 (230)
54 d2icta1 a.35.1.3 (A:8-94) Anti 24.8 46 0.0034 20.5 4.2 33 155-187 17-49 (87)
55 d2nu7a2 c.23.4.1 (A:122-287) S 22.9 1.1E+02 0.0077 21.1 6.4 50 52-103 70-119 (166)
56 d2nxoa1 c.94.1.1 (A:5-281) Hyp 21.9 53 0.0038 24.2 4.8 38 146-183 211-249 (277)
57 d1a8sa_ c.69.1.12 (A:) Chlorop 21.2 75 0.0054 21.9 5.4 13 78-90 73-85 (273)
58 d1un8a4 c.119.1.2 (A:1-335) Di 20.6 36 0.0026 27.1 3.5 31 44-76 236-266 (335)
No 1
>d1tg6a1 c.14.1.1 (A:1-193) Clp protease, ClpP subunit {Human (Homo sapiens), mitochondrial [TaxId: 9606]}
Probab=100.00 E-value=8.2e-52 Score=336.39 Aligned_cols=191 Identities=36% Similarity=0.640 Sum_probs=176.7
Q ss_pred CeeeeecCCCCC-CchhhhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHH
Q 028125 7 PKVLYRTPGEGS-WQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTM 85 (213)
Q Consensus 7 ~~~~~~~~~~~~-~~~~~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i 85 (213)
|++|+-.+...- -.|.|+|++|+++|+|||+|+|++++++.++++|.+|+.+++.++|.|+||||||++++|++|||+|
T Consensus 1 p~~p~~~~~~~~~~~~~Di~s~l~~~Riifl~g~I~~~~~~~~i~~l~~l~~~~~~~~I~l~InS~GG~v~~g~~i~d~i 80 (193)
T d1tg6a1 1 PLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTM 80 (193)
T ss_dssp CCCCBCC---------CBHHHHHHTTTEEEEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHH
T ss_pred CCCCEEEeecCCCchhhhHhHHHhccCEEEECCEEchHHHHHHHHHHHHhcccCCCcEEEEEeecCcccHHHHHHHHHHH
Confidence 566664332221 2367999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 028125 86 QSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQP 165 (213)
Q Consensus 86 ~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~ 165 (213)
+.++.||+|+|.|.|+|+|++|++||++++|++.|||++|+|||+++..|+.+|++.++++++++++.+.++|+++||++
T Consensus 81 ~~~~~~V~tv~~G~aaS~a~~il~aG~~g~R~~~pns~~miHq~~~~~~G~~~di~~~~~el~~~~~~i~~i~a~~Tg~~ 160 (193)
T d1tg6a1 81 QYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQS 160 (193)
T ss_dssp HHSCSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HhhcCceEEEEccchHHHHHHHhhcCccCccccCcccHHHhcCCccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCceeCHHHHHHcCCceEecCCc
Q 028125 166 FEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 197 (213)
Q Consensus 166 ~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~ 197 (213)
.+++++++++|+||||+||++|||||+|++.+
T Consensus 161 ~~~i~~~~~rD~~lta~EAl~yGliD~Ii~~~ 192 (193)
T d1tg6a1 161 LQVIESAMERDRYMSPMEAQEFGILDKVLVHP 192 (193)
T ss_dssp HHHHHHHHSSCEEECHHHHHHHTSCSEECSSC
T ss_pred HHHHHHHhccCccCCHHHHHHcCCCCEEccCC
Confidence 99999999999999999999999999999864
No 2
>d1y7oa1 c.14.1.1 (A:2-193) Clp protease, ClpP subunit {Streptococcus pneumoniae [TaxId: 1313]}
Probab=100.00 E-value=1.1e-50 Score=329.46 Aligned_cols=188 Identities=34% Similarity=0.638 Sum_probs=164.9
Q ss_pred CCeeeeecC-CCCCCchhhhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHH
Q 028125 6 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDT 84 (213)
Q Consensus 6 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~ 84 (213)
+|+||.++| |+.. .|+|++|+++|+|||+|+|++++++.++++|.+++.+++.++|+|+||||||+|.+|++|||+
T Consensus 1 ~p~v~~~~~~~~~~---~di~s~Ll~~rii~l~g~I~~~~~~~~~~~l~~l~~~~~~~~I~l~InS~GG~v~~glai~d~ 77 (192)
T d1y7oa1 1 IPVVIEQTSRGERS---YDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDT 77 (192)
T ss_dssp CCEECC-------C---EEHHHHHHHTTEEEEESCBCHHHHHHHHHHHHHHHHHCTTSCEEEEEEECCBCHHHHHHHHHH
T ss_pred CCEEEEeCCCCcch---hhhhhHHhccCEEEECCEEchHHHHHHHHHHHHhhhhcccCceeeeecCCCCCHHHHHHHHHH
Confidence 699999999 5444 599999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCCh--HHHHHHHHHHHHHHHHHHHHHHHHh
Q 028125 85 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQA--DDIRNEADELLRVRDYIFKELSRKT 162 (213)
Q Consensus 85 i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~--~d~~~~~~~l~~~~~~~~~~~a~~t 162 (213)
|+.++.||+|+|.|.|||+|++|++||++++|++.|||++|+|+|+++..|+. .+++..++++.++++.+.++|+++|
T Consensus 78 i~~~~~~v~t~~~G~aaS~as~il~aG~~g~R~~~pns~~miHq~~~~~~G~~~~~~~~~~~~el~~~~~~i~~i~~~~t 157 (192)
T d1y7oa1 78 MNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENS 157 (192)
T ss_dssp HHHSSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEECCCCC--------------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCcceEEEeccccCCccceeeeecCCCccccchHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998889999999999999999888864 4667778899999999999999999
Q ss_pred CCCHHHHHHHhcCCceeCHHHHHHcCCceEecCC
Q 028125 163 GQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 196 (213)
Q Consensus 163 g~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~ 196 (213)
|++.+++.+.+++++||||+||++|||||+|+++
T Consensus 158 g~~~~~i~~~~~rd~~lsa~EAleyGliD~Ii~~ 191 (192)
T d1y7oa1 158 GQSMEKVHADAERDNWMSAQETLEYGFIDEIMAN 191 (192)
T ss_dssp TCCHHHHHHHHHSCCCBCHHHHHHHTSCSEECCC
T ss_pred CCCHHHHHHhhcCCceecHHHHHHcCCCcEEecC
Confidence 9999999999999999999999999999999976
No 3
>d1yg6a1 c.14.1.1 (A:11-193) Clp protease, ClpP subunit {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.6e-48 Score=314.37 Aligned_cols=181 Identities=40% Similarity=0.721 Sum_probs=174.6
Q ss_pred CCCCCCchhhhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeE
Q 028125 14 PGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVG 93 (213)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~ 93 (213)
-||+. +|+|++|+++|+|||+|+|++++++.++++|.+++.++..++|+|+||||||+|++++.|||+|+.++.||+
T Consensus 2 ~~~~~---~di~s~L~~~riI~l~g~I~~~~~~~~i~~l~~l~~~~~~~~I~l~InS~GG~v~~g~~i~d~i~~~~~~v~ 78 (183)
T d1yg6a1 2 RGERS---FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS 78 (183)
T ss_dssp SSCCC---CBHHHHHHTTTEEEEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHSSSCEE
T ss_pred Cccch---hhHhHHHhccCEEEECCEECHHHHHHHHHHHHHhhhhccCCceEEEEeCCCccHHHHHHHHHHHHhCCCCEE
Confidence 46666 699999999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred EEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHh
Q 028125 94 THCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDL 173 (213)
Q Consensus 94 t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~ 173 (213)
|+|.|.|+|+|++|++||++++|++.|||++|+|+|+++..|+..+++...++++++.+.+.+.|+++||++.+++.+++
T Consensus 79 tv~~G~aaS~a~~I~~ag~~~~R~~~~ns~~miH~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~tg~~~e~i~~~~ 158 (183)
T d1yg6a1 79 TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 158 (183)
T ss_dssp EEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHT
T ss_pred EEEEEEeHHHHHHHHHcCCCCceeeCCCceEEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence 99999999999999999998889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeCHHHHHHcCCceEecCCc
Q 028125 174 SRIKRFGSQEALEYGLIDRIIRPP 197 (213)
Q Consensus 174 ~~~~~~sa~EA~~~GLiD~I~~~~ 197 (213)
.+|+||+|+||+++||||+|++.+
T Consensus 159 ~~d~~lta~EAl~~GliD~Ii~~~ 182 (183)
T d1yg6a1 159 ERDRFLSAPEAVEYGLVDSILTHR 182 (183)
T ss_dssp SSCEEEEHHHHHHHTSSSEECCCC
T ss_pred ccCccccHHHHHHcCCCcEEeccC
Confidence 999999999999999999999875
No 4
>d2cbya1 c.14.1.1 (A:15-193) Clp protease, ClpP subunit {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00 E-value=2.3e-48 Score=312.51 Aligned_cols=174 Identities=39% Similarity=0.691 Sum_probs=160.4
Q ss_pred hhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccccch
Q 028125 23 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYH 102 (213)
Q Consensus 23 ~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~aaS 102 (213)
+||++|+++|+|||+|+||+++++.++++|++++.+++.++|+|+||||||+|.++++|||+|+.++.||+|++.|.|+|
T Consensus 5 ~i~~~l~~~rii~l~g~I~~~~~~~~i~~l~~l~~~~~~~~I~l~InS~GG~v~~gl~i~d~i~~~~~~v~t~~~G~aaS 84 (179)
T d2cbya1 5 SVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAAS 84 (179)
T ss_dssp HHHHHHHTTTEEEECSCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHCSSCEEEEEEEEEET
T ss_pred HHHHHHHhCCEEEECCEECHHHHHHHHHHHHHHhccCCCCeEEEEeeCCCCCHHHHHHHHHHHHhhccceeeehhhhhhh
Confidence 68999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHH
Q 028125 103 LAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQ 182 (213)
Q Consensus 103 aa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~ 182 (213)
+|++|+++|++++|++.|||++|+|+|+++..|+..+++..+++++++++.+.++|+++||++.+++.+.+++++||||+
T Consensus 85 ~a~~il~ag~k~~R~~~~~s~~miH~~~~~~~G~~~~i~~~~~~l~~~~~~i~~i~a~~tg~~~~~i~~~~~~d~~l~a~ 164 (179)
T d2cbya1 85 MGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAA 164 (179)
T ss_dssp HHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEEEHH
T ss_pred HHHHHHHcCCCCceEECCchHhhcCCCchhcCCccHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHhhcCCceecHH
Confidence 99999999998889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceEecCC
Q 028125 183 EALEYGLIDRIIRP 196 (213)
Q Consensus 183 EA~~~GLiD~I~~~ 196 (213)
||+++||||+|++.
T Consensus 165 EA~~~GliDeIi~~ 178 (179)
T d2cbya1 165 EALEYGFVDHIITR 178 (179)
T ss_dssp HHHHHTSCSEECSC
T ss_pred HHHHcCCCcEEecC
Confidence 99999999999875
No 5
>d2f6ia1 c.14.1.1 (A:177-366) Clp protease, ClpP subunit {Plasmodium falciparum [TaxId: 5833]}
Probab=100.00 E-value=9.2e-47 Score=305.82 Aligned_cols=179 Identities=31% Similarity=0.577 Sum_probs=164.0
Q ss_pred hhhhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEcccc
Q 028125 21 WVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFA 100 (213)
Q Consensus 21 ~~~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~a 100 (213)
+.|+++.++++|+|||+|+||+++++.++++|.+|+..+ .++|+|+||||||+|++|++|||+|+.++.||+|++.|.|
T Consensus 8 ~~d~~~~l~~~rii~l~g~Id~~~~~~~i~~l~~l~~~~-~~~I~l~INS~GG~v~~g~ai~d~i~~~~~~v~tv~~G~a 86 (190)
T d2f6ia1 8 KKDVKLFFFKKRIIYLTDEINKKTADELISQLLYLDNIN-HNDIKIYINSPGGSINEGLAILDIFNYIKSDIQTISFGLV 86 (190)
T ss_dssp SHHHHHHHHTTTEEEECSCBCHHHHHHHHHHHHHHHHHC-CSCEEEEEEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred hhhHHHHHHcCcEEEECCeeCHHHHHHHHHHHHHHhccC-CCCeEEEEeCchhhhhHHHHHHHHHHhhCCceEEEEeccc
Confidence 679999999999999999999999999999999998765 5789999999999999999999999999999999999999
Q ss_pred chHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeC
Q 028125 101 YHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 180 (213)
Q Consensus 101 aSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~s 180 (213)
+|+|++|+++|+++.|++.|||++|+|+|+.+..|+.+|++...++++++++.+.++|+++||++.+++.+++++++||+
T Consensus 87 aS~a~~i~~aG~kg~R~~~pns~imiH~~s~~~~G~~~di~~~~~~l~~~~~~~~~i~a~~tg~~~~~i~~~~~~d~~l~ 166 (190)
T d2f6ia1 87 ASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMN 166 (190)
T ss_dssp CHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEEC
T ss_pred cchhHHHHHhCCCCccccCCCcEEEEcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhccCCeeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCceEecCCcccc
Q 028125 181 SQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 181 a~EA~~~GLiD~I~~~~~~~ 200 (213)
|+||+++||||+|++++...
T Consensus 167 a~EAl~~GliD~Ii~~~~~~ 186 (190)
T d2f6ia1 167 ALEAKQYGIIDEVIETKLPH 186 (190)
T ss_dssp HHHHHHHTSCSEECCCSSCC
T ss_pred HHHHHHcCCCcEEcccCCCC
Confidence 99999999999999875443
No 6
>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.97 E-value=5.6e-09 Score=85.11 Aligned_cols=147 Identities=15% Similarity=0.104 Sum_probs=100.8
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhH-------------------------HHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP-------------------------TLAI 81 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~-------------------------~~~I 81 (213)
.+|+|+-+ ++.++...+.+.+..++.++ . +.+.+.+-|+...+ ...+
T Consensus 14 ~~Itlnrp~~~Nals~~~~~~l~~~l~~~~~d~-~--v~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (245)
T d2f6qa1 14 TKIMFNRPKKKNAINTEMYHEIMRALKAASKDD-S--IITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREF 90 (245)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSS-C--SEEEEEESTTCSBCCBCC----CCCTTHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCC-c--eEEeecCCCccccCCccchhhhcccccccccccchhhhHHHHH
Confidence 34566544 66677788888888876653 2 34566555532111 1256
Q ss_pred HHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 028125 82 YDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 161 (213)
Q Consensus 82 ~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~ 161 (213)
+..|..+++|+++.+.|.|..+|.-++++||. |++.+++.|.+.....+..-..-- ...+.+.
T Consensus 91 ~~~i~~~~kpvIa~v~G~a~GgG~~la~~~D~--~ia~~~a~f~~pe~~~G~~p~~g~-------~~~l~~~-------- 153 (245)
T d2f6qa1 91 VGCFIDFPKPLIAVVNGPAVGISVTLLGLFDA--VYASDRATFHTPFSHLGQSPEGCS-------SYTFPKI-------- 153 (245)
T ss_dssp HHHHHSCCSCEEEEECSCEETHHHHGGGGCSE--EEEETTCEEECCTGGGTCCCCTTH-------HHHHHHH--------
T ss_pred HhhhhhcCCceEEEECCccccccccchhhhhh--hhhhccCeEecccccCCCCccccc-------hhhcccc--------
Confidence 67888999999999999999999999999998 999999999875554432111100 0111111
Q ss_pred hCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 162 TGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 162 tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
+......+++-.+..++|+||+++||||+|...++..
T Consensus 154 --~g~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~ 190 (245)
T d2f6qa1 154 --MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQ 190 (245)
T ss_dssp --HCHHHHHHHHTTCCCEEHHHHHHTTSCSEEECTTTHH
T ss_pred --cccchhhhhcccccccccccccccccccccCCcchHH
Confidence 1344555666667889999999999999999877644
No 7
>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]}
Probab=98.92 E-value=1.1e-08 Score=83.29 Aligned_cols=149 Identities=15% Similarity=0.165 Sum_probs=104.4
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeC----CCCChh------------------HHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYING----PGGDVT------------------PTLAIYDT 84 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INS----pGG~v~------------------~~~~I~~~ 84 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+. -||+.. ....++..
T Consensus 10 a~Itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~v~~vvl~g~g~~f~aG~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (253)
T d1uiya_ 10 AVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSLMRLFHR 89 (253)
T ss_dssp EEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEecccccccccchhHHhhhccccCcccccchhhhhhhhhhH
Confidence 45677544 6677788899999888777767766664332 244431 22345677
Q ss_pred HHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 028125 85 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQ 164 (213)
Q Consensus 85 i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~ 164 (213)
|..+++||++.+.|.|..+|..++++||. |++.+++.|.++....+... ... ...+ .+. +
T Consensus 90 i~~~~kpvIaav~G~a~GgG~~lal~~D~--ria~~~a~~~~~e~~~g~~~---~~~-----~~~l--------~~~--~ 149 (253)
T d1uiya_ 90 VYTYPKPTVAAVNGPAVAGGAGLALACDL--VVMDEEARLGYTEVKIGFVA---ALV-----SVIL--------VRA--V 149 (253)
T ss_dssp HHHCSSCEEEEECSCEETHHHHHHHTSSE--EEEETTCEEECCHHHHTCCC---HHH-----HHHH--------HHH--S
T ss_pred HhcCCCCEEEEeCeEEehhhHHHHhhhhh--hhhhhhhHHhhhhccccccc---ccc-----hhhh--------hcc--c
Confidence 88999999999999999999999999998 99999999986654432211 100 0111 111 3
Q ss_pred CHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 165 PFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 165 ~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
......+++-.++.++++||+++||||+|...++..
T Consensus 150 g~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~~~ 185 (253)
T d1uiya_ 150 GEKAAKDLLLTGRLVEAREAKALGLVNRIAPPGKAL 185 (253)
T ss_dssp CHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTCHH
T ss_pred CHHHHHHHhhcCcCCCHHHHHHhCCCcccccccccc
Confidence 445555555456889999999999999999877643
No 8
>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.91 E-value=1.1e-08 Score=84.17 Aligned_cols=149 Identities=15% Similarity=0.123 Sum_probs=104.9
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEE-----eCCCCCh---------------hHHHHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYI-----NGPGGDV---------------TPTLAIYDTMQ 86 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~I-----NSpGG~v---------------~~~~~I~~~i~ 86 (213)
.+|+|+-+ ++.++.+.+.+.+..++.+++.+.|+|.= -|-|++. .....++..|.
T Consensus 17 ~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~f~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~i~ 96 (266)
T d1hzda_ 17 VVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIA 96 (266)
T ss_dssp EEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCCcceEEEeccccccccccccccccccccchhhhhhhhHHHHHHHHHh
Confidence 34666543 67778899999999888877777776642 2233332 23446778888
Q ss_pred hcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Q 028125 87 SLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 166 (213)
Q Consensus 87 ~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~ 166 (213)
.+++||++.+.|.|..+|.-++++||. |++.++++|.+.....+..-..-- ...+.+. +..
T Consensus 97 ~~~kpvIaav~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~-------~~~l~~~----------ig~ 157 (266)
T d1hzda_ 97 NLPVPTIAAIDGLALGGGLELALACDI--RVAASSAKMGLVETKLAIIPGGGG-------TQRLPRA----------IGM 157 (266)
T ss_dssp TCSSCEEEEESEEEETHHHHHHHHSSE--EEEETTCEEECCGGGGTCCCCSSH-------HHHHHHH----------HCH
T ss_pred cCCcccccccccccccccceeccccce--eeecCCcEEeecccceeecCCccc-------eeeehhh----------hHH
Confidence 999999999999999999999999998 999999999765544332111000 0111111 234
Q ss_pred HHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 167 EKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 167 ~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
....+++-.+..++|+||+++||||+|...++.
T Consensus 158 ~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l 190 (266)
T d1hzda_ 158 SLAKELIFSARVLDGKEAKAVGLISHVLEQNQE 190 (266)
T ss_dssp HHHHHHHHHTCEEEHHHHHHHTSCSEEECCCTT
T ss_pred HHHHhhhccCCccCHHHhhcccccccccChhhh
Confidence 555556555788999999999999999988653
No 9
>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]}
Probab=98.88 E-value=1.4e-08 Score=82.01 Aligned_cols=147 Identities=10% Similarity=0.204 Sum_probs=99.4
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCC-------h----------------hHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD-------V----------------TPTLAIYD 83 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~-------v----------------~~~~~I~~ 83 (213)
.+|+|+-+ ++.++...+.+.+..++.+++.+.|+| -|-||. + .....++.
T Consensus 11 ~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~i~~vVl--~~~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 88 (230)
T d2a7ka1 11 RVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVV--YGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQ 88 (230)
T ss_dssp EEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEE--ECCTTSCSBCBSCHHHHHTC-CHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCcccccce--eccchhhhhhhcccccccccccccccccchhhhhhhhh
Confidence 45667643 666777888888887776655554433 344432 1 22345678
Q ss_pred HHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028125 84 TMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTG 163 (213)
Q Consensus 84 ~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg 163 (213)
.|+.+++|+++.+.|.|..+|.-++++||. |++.+++.|.+-....+.. + +.... .+.+ ..
T Consensus 89 ~i~~~~kpvIaav~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~--p-~~g~~--~l~~-----------~i- 149 (230)
T d2a7ka1 89 AVLNVNKPTIAAVDGYAIGMGFQFALMFDQ--RLMASTANFVMPELKHGIG--C-SVGAA--ILGF-----------TH- 149 (230)
T ss_dssp HHHTCCSCEEEEECSEEETHHHHHHTTSSE--EEEETTCEEECCGGGGTCC--C-HHHHH--HHHH-----------HH-
T ss_pred cccchhcceeeecccccccccccchhccch--hhccccchhhhcccccccc--c-ccccc--cccc-----------cc-
Confidence 888999999999999999999999999998 9999999987644433321 1 22110 1111 11
Q ss_pred CCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 164 QPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 164 ~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
......+++-.+..|+++||+++||||+|...+++.
T Consensus 150 -G~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~ 185 (230)
T d2a7ka1 150 -GFSTMQEIIYQCQSLDAPRCVDYRLVNQVVESSALL 185 (230)
T ss_dssp -CHHHHHHHHHHCCCBCHHHHHHHTCCSEEECHHHHH
T ss_pred -ccccccccccccccchHHHHHHhhhcccCCChHHHH
Confidence 233344444345778999999999999999876543
No 10
>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]}
Probab=98.85 E-value=9.7e-09 Score=84.53 Aligned_cols=142 Identities=12% Similarity=0.050 Sum_probs=97.8
Q ss_pred cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH-----------------HHHHHHHHHhcCCCeEEEEcc
Q 028125 40 IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP-----------------TLAIYDTMQSLKSPVGTHCVG 98 (213)
Q Consensus 40 I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~-----------------~~~I~~~i~~~~~~v~t~~~G 98 (213)
++.++...+.+.+..++.+++.+.|+|.=+ |.|+++.. ...++..|..+++||++.+.|
T Consensus 33 l~~~m~~el~~~~~~~~~d~~vr~vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIa~v~G 112 (263)
T d1wz8a1 33 MPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASHEALLRVFWEARDLVLGPLNFPRPVVAAVEK 112 (263)
T ss_dssp BCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSSSCEEEEECS
T ss_pred CCHHHHHHHHHHHHHHhhCCCCeEEEEecccccccccchhhhhhhhcccccccccchhhhhHHHHHhhhhhcceeeeccc
Confidence 555677888888888877776776666433 34555422 235567788899999999999
Q ss_pred ccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCce
Q 028125 99 FAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 178 (213)
Q Consensus 99 ~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~ 178 (213)
.|..+|..++++||- |++.+++.|.+.....+.....-- ...+.+. . ......+++-.+..
T Consensus 113 ~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~~~-------~~~l~~~--------~--G~~~a~~l~l~g~~ 173 (263)
T d1wz8a1 113 VAVGAGLALALAADI--AVVGKGTRLLDGHLRLGVAAGDHA-------VLLWPLL--------V--GMAKAKYHLLLNEP 173 (263)
T ss_dssp EEETHHHHHHHHSSE--EEEETTCEEECCHHHHTSCCTTTH-------HHHTHHH--------H--CHHHHHHHHHHTCC
T ss_pred ccccccccccccccc--cccccccccccccccccccccccc-------ccccccc--------c--ccchhhhhcccccc
Confidence 999999999999998 999999999765544332111100 0111111 1 23344445545677
Q ss_pred eCHHHHHHcCCceEecCCcccc
Q 028125 179 FGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 179 ~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
++++||+++||||+|.+..+..
T Consensus 174 i~a~eA~~~Glv~~vv~~~~l~ 195 (263)
T d1wz8a1 174 LTGEEAERLGLVALAVEDEKVY 195 (263)
T ss_dssp EEHHHHHHHTSSSEEECGGGHH
T ss_pred cchhHHHhcCCcccccchhhhh
Confidence 9999999999999999876544
No 11
>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]}
Probab=98.83 E-value=1.8e-08 Score=84.87 Aligned_cols=139 Identities=14% Similarity=0.139 Sum_probs=97.5
Q ss_pred cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChhH------------------HHHHHHHHHhcCCCeEEEEc
Q 028125 40 IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVTP------------------TLAIYDTMQSLKSPVGTHCV 97 (213)
Q Consensus 40 I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~~------------------~~~I~~~i~~~~~~v~t~~~ 97 (213)
++.++.+.+.+.+..++.+++.+.|+|.=+ |.|+++.. ...++..|+.+++||++.+.
T Consensus 32 l~~~~~~el~~al~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~ 111 (310)
T d1wdka4 32 FNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPTVAAIN 111 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSSBBCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccchhhhhhhhhcccccchhhhhhhhHHHHHHHHhhcCCccceeecc
Confidence 566677888888888877766666665421 33444321 23577889999999999999
Q ss_pred cccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhc
Q 028125 98 GFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLS 174 (213)
Q Consensus 98 G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~ 174 (213)
|.|..+|.-++++||. |++.+++.|.+.....+. .|-.. .+.+. +......+++-
T Consensus 112 G~a~GgG~elal~cD~--ria~~~a~f~~pe~~~Gl~P~~gg~~----------~L~r~----------iG~~~a~~lll 169 (310)
T d1wdka4 112 GIALGGGLEMCLAADF--RVMADSAKIGLPEVKLGIYPGFGGTV----------RLPRL----------IGVDNAVEWIA 169 (310)
T ss_dssp SCEETHHHHHHHTSSE--EEEETTCEEECGGGGGTCCCCSSHHH----------HHHHH----------HCHHHHHHHHH
T ss_pred ccccccccccchhhhh--hhccccceecccccccCCCccccchh----------hhhhh----------hhhhhhhhhhc
Confidence 9999999999999998 999999998776544332 11111 11111 12333444444
Q ss_pred CCceeCHHHHHHcCCceEecCCcccc
Q 028125 175 RIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 175 ~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
.+..++++||+++||||+|...++..
T Consensus 170 ~g~~~~a~eA~~~Glv~~vv~~~~l~ 195 (310)
T d1wdka4 170 SGKENRAEDALKVSAVDAVVTADKLG 195 (310)
T ss_dssp HCCCEEHHHHHHTTSSSEEECGGGHH
T ss_pred cccccCHHHHhhccCccEEccHHHHH
Confidence 46789999999999999999876643
No 12
>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.82 E-value=2.3e-08 Score=82.34 Aligned_cols=141 Identities=14% Similarity=0.170 Sum_probs=97.1
Q ss_pred cCcchHHHHHHHHHhhccCCCCCceEEEEeCC----CCChhHH--------------------------HHHHHHHHhcC
Q 028125 40 IDEEFSNQILATMLYLDSVDDSKRVYMYINGP----GGDVTPT--------------------------LAIYDTMQSLK 89 (213)
Q Consensus 40 I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSp----GG~v~~~--------------------------~~I~~~i~~~~ 89 (213)
++.++...+.+.|..++.+++.+.|+|.=+.+ |+++... ..++..|..++
T Consensus 28 ls~~m~~el~~~l~~~~~d~~v~~vvltg~~~~F~aG~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 107 (275)
T d1dcia_ 28 MNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCP 107 (275)
T ss_dssp BCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCHHHHHHHHHHHHHHHhCCCceEEEEeccccccccCccHHHhhhcccccccccccchhhhhccchhhhHHHHHHHHhcC
Confidence 66777888999999888776666655543322 5565332 24667889999
Q ss_pred CCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Q 028125 90 SPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKI 169 (213)
Q Consensus 90 ~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i 169 (213)
+||++.+.|.|..+|.-++++||- |++.+++.|.+.....+..-..-- ...+ .+..| .....
T Consensus 108 kPvIaav~G~a~GgG~~lal~~D~--ria~~~a~f~~pe~~~Gl~p~~~~-------~~~~--------~~~~g-~~~~~ 169 (275)
T d1dcia_ 108 KPVIAAIHGGCIGGGVDLISACDI--RYCTQDAFFQVKEVDVGLAADVGT-------LQRL--------PKVIG-NRSLV 169 (275)
T ss_dssp SCEEEEECSEEETHHHHHHTTSSE--EEEETTCEEECCGGGGTSCCCSSH-------HHHG--------GGTCS-CHHHH
T ss_pred CCEEEEEeeEeehhhHHHHhhcCc--hhhccCccccchhccccccccccc-------cccc--------ccccc-ccccc
Confidence 999999999999999999999998 999999998865444331111000 0000 01111 22333
Q ss_pred HHHhcCCceeCHHHHHHcCCceEecCCcc
Q 028125 170 TKDLSRIKRFGSQEALEYGLIDRIIRPPR 198 (213)
Q Consensus 170 ~~~~~~~~~~sa~EA~~~GLiD~I~~~~~ 198 (213)
.+++-.+..++++||++.||||+|....+
T Consensus 170 ~~ll~~g~~~~a~eA~~~Glv~~v~~~~~ 198 (275)
T d1dcia_ 170 NELTFTARKMMADEALDSGLVSRVFPDKD 198 (275)
T ss_dssp HHHHHHCCEEEHHHHHHHTSSSEEESSHH
T ss_pred ccccccccccchhhhccCCCceeeeehhh
Confidence 34555578899999999999999987654
No 13
>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]}
Probab=98.79 E-value=5.3e-09 Score=86.32 Aligned_cols=147 Identities=10% Similarity=0.062 Sum_probs=98.1
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCCCC------Chh--------------------HHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGG------DVT--------------------PTLA 80 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG------~v~--------------------~~~~ 80 (213)
..|+++-+ ++.++...+.+.+..++++++.+.|+|. |.|+ ++. ....
T Consensus 14 a~Itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~i~~vvlt--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (269)
T d1nzya_ 14 AEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMIT--GAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQ 91 (269)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEE--ESTTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEe--CCcccccchhhHHHHhhcccccchhhHHHHHHHHHHH
Confidence 34566543 5667788888888888877666655554 4443 221 1225
Q ss_pred HHHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q 028125 81 IYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSR 160 (213)
Q Consensus 81 I~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~ 160 (213)
+.+.|..+++||++.+.|.|..+|..++++||. |++.+++.+.+.....+.....--. ..+.+.+
T Consensus 92 ~~~~i~~~~kPvIaav~G~a~GgG~~lal~~D~--ria~~~a~~~~~~~~~g~~~~~g~~-------~~l~~~i------ 156 (269)
T d1nzya_ 92 MIHKIIRVKRPVLAAINGVAAGGGLGISLASDM--AICADSAKFVCAWHTIGIGNDTATS-------YSLARIV------ 156 (269)
T ss_dssp HHHHHHHCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTCCCCTTHH-------HHHHHHH------
T ss_pred HHHHHHhhcchhehhhhhhcCCCceeeeecccH--hhhhhhhhhcccccccccccccccc-------ccccccc------
Confidence 667788999999999999999999999999998 9999999987655443321111000 1111111
Q ss_pred HhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 161 KTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 161 ~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
......+++-.+..++|+||+++||||+|...++.
T Consensus 157 ----g~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l 191 (269)
T d1nzya_ 157 ----GMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEF 191 (269)
T ss_dssp ----HHHHHHHHHHHCCCBCHHHHHHHTSCSCEECHHHH
T ss_pred ----ChhhhhhccccccccchhHHHHcCCcccccccccc
Confidence 11223344434667899999999999999876554
No 14
>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.78 E-value=3.1e-08 Score=81.35 Aligned_cols=138 Identities=14% Similarity=0.022 Sum_probs=94.1
Q ss_pred cCcchHHHHHHHHHhhccCCCCCceEEEEe----CCCCChh--------------------------HHHHHHHHHHhcC
Q 028125 40 IDEEFSNQILATMLYLDSVDDSKRVYMYIN----GPGGDVT--------------------------PTLAIYDTMQSLK 89 (213)
Q Consensus 40 I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN----SpGG~v~--------------------------~~~~I~~~i~~~~ 89 (213)
++.++...+.+.+..++.+++.+.|+|.=+ |.|+++. ....+++.|..++
T Consensus 29 ~~~~~~~el~~al~~~~~d~~v~~vVl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 108 (266)
T d1pjha_ 29 LEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVARNVYVTDAFIKHS 108 (266)
T ss_dssp BCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSSHHHHHHHHTHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHHHhCCCceEEEEeccccccccchhHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 566677888888888877766666666322 4455442 2224777899999
Q ss_pred CCeEEEEccccchHHHHHHhcCCCCcEeeccC-CeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 028125 90 SPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL-SRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRKTGQP 165 (213)
Q Consensus 90 ~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~-s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~ 165 (213)
+|+++.+.|.|..+|.-|+++||. |++.+. +.|.+.....+. .|... .+ .+. +.
T Consensus 109 kP~IAav~G~a~GgG~~lal~~D~--~ia~~~~~~~~~pe~~lGl~p~~g~~~----------~l--------~r~--~g 166 (266)
T d1pjha_ 109 KVLICCLNGPAIGLSAALVALCDI--VYSINDKVYLLYPFANLGLITEGGTTV----------SL--------PLK--FG 166 (266)
T ss_dssp SEEEEEECSCEEHHHHHHHHHSSE--EEESSTTCEEECCHHHHTCCCCTTHHH----------HH--------HHH--HC
T ss_pred hhhhhhhhcccccccccchhccch--hhhhhcccccccccccccccccccccc----------cc--------ccc--cc
Confidence 999999999999999999999998 998765 566653333221 11110 11 111 13
Q ss_pred HHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 166 FEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 166 ~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
.....+++-.+..++++||+++||||+|...++.
T Consensus 167 ~~~a~~llltg~~~~a~eA~~~Glv~~v~~~~~~ 200 (266)
T d1pjha_ 167 TNTTYECLMFNKPFKYDIMCENGFISKNFNMPSS 200 (266)
T ss_dssp HHHHHHHHHTTCCEEHHHHHHTTCCSEECCCCTT
T ss_pred cchhhhhhccCCcCCHHHHHHCCCEeEeeCchhh
Confidence 3444555555788999999999999999876553
No 15
>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.75 E-value=3.3e-08 Score=82.52 Aligned_cols=150 Identities=11% Similarity=0.055 Sum_probs=104.9
Q ss_pred cCcE--EEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCC----CCChh----------------------
Q 028125 30 RERV--IFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGP----GGDVT---------------------- 76 (213)
Q Consensus 30 ~~~i--I~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSp----GG~v~---------------------- 76 (213)
++.| |+|+-+ ++.++...+.+.+..++.+++.+.|+|.=+.+ ||...
T Consensus 27 ~~gi~~ItlnRP~~~NAl~~~m~~eL~~~l~~~~~d~~vr~vVltg~~~~f~~gG~~f~ag~Dl~~~~~~~~~~~~~~~~ 106 (297)
T d1q52a_ 27 DDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTA 106 (297)
T ss_dssp SSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCC------------------
T ss_pred cCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCccEEEEecCCCcccchhhhhhhcchhhhhccccccccccccc
Confidence 4555 666554 66677888888888888877788888876644 34321
Q ss_pred -----------HHHHHHHHHHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCC-eEEEeCCCccCC--CChHHHHH
Q 028125 77 -----------PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLS-RIALDSPAGAAR--GQADDIRN 142 (213)
Q Consensus 77 -----------~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s-~i~iH~p~~~~~--G~~~d~~~ 142 (213)
....+++.|..+++||++.+.|.|..+|..++++||- |++.+.+ .|.+.....+.. +....
T Consensus 107 ~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GGG~~lal~~D~--~ia~~~~~~f~~pe~~~Gl~p~~~~~~--- 181 (297)
T d1q52a_ 107 DTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDL--TLASREYARFKQTDADVGSFDGGYGSA--- 181 (297)
T ss_dssp -----------CHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSE--EEEETTTCEEECCGGGGTCCCCSTTTH---
T ss_pred chhhhHHHHHHHHHHHHHHHHhcCCeEEEEEcceeeeccchhhhhhhc--cccccccccceeeeecccccccccccc---
Confidence 1235778889999999999999999999999999998 9998865 566655444321 11111
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 143 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 143 ~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
.+.+. +......+++-.++.++++||+++||||+|...+++.
T Consensus 182 ------~L~r~----------iG~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~el~ 223 (297)
T d1q52a_ 182 ------YLARQ----------VGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELE 223 (297)
T ss_dssp ------HHHHH----------HCHHHHHHHHHHCCEECHHHHHHHTSCSEEECGGGHH
T ss_pred ------ccccc----------cCccceeeccccccccchHhhhhhccccccCchHHhh
Confidence 11111 1233444455457889999999999999999877654
No 16
>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.74 E-value=7.3e-09 Score=84.60 Aligned_cols=145 Identities=12% Similarity=0.106 Sum_probs=98.7
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHH-------------------HHHHHHHHh
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPT-------------------LAIYDTMQS 87 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~-------------------~~I~~~i~~ 87 (213)
.+|+|+-| ++.++...+.+.|..++.+++.+.|+| .+-|+...+| ..+++.|..
T Consensus 18 ~~itlnrP~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl--~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (260)
T d1mj3a_ 18 GLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVL--TGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITR 95 (260)
T ss_dssp EEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEE--ECCSSEEECCBCHHHHTTCCHHHHHHC--CCGGGGGGG
T ss_pred EEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCcceEEE--ecccccccccchhhhhhccchhhhhHHHHHHHHHHhcc
Confidence 45777654 666778888888888877766665544 4444332111 133467778
Q ss_pred cCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccC---CCChHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 028125 88 LKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA---RGQADDIRNEADELLRVRDYIFKELSRKTGQ 164 (213)
Q Consensus 88 ~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~ 164 (213)
+++||++.+.|.|..+|..|+++||- |++.+++.|.+-....+. .|...-+ . +. +
T Consensus 96 ~~kPvIaav~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~~~~~~l-------~---~~----------i 153 (260)
T d1mj3a_ 96 IKKPVIAAVNGYALGGGCELAMMCDI--IYAGEKAQFGQPEILLGTIPGAGGTQRL-------T---RA----------V 153 (260)
T ss_dssp CSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECGGGGGTCCCCSSTTTHH-------H---HH----------H
T ss_pred CCCeEEEEEcCeEeHHHHHHHHHCCE--EEEcCCCEEECchhccCcCCcccHHHHH-------H---HH----------h
Confidence 88999999999999999999999998 999999998775443321 2221111 1 11 1
Q ss_pred CHHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 165 PFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 165 ~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
......+++-.+..++++||+++||||+|...++..
T Consensus 154 g~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~~~ 189 (260)
T d1mj3a_ 154 GKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLV 189 (260)
T ss_dssp CHHHHHHHHHHCCCEEHHHHHHHTSCSEEECTTTHH
T ss_pred CHHHHHHHHHcCcccCchhhccCCCceeeecccccc
Confidence 223334444345778999999999999999887654
No 17
>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]}
Probab=98.72 E-value=2.6e-08 Score=81.29 Aligned_cols=151 Identities=13% Similarity=0.106 Sum_probs=100.6
Q ss_pred EEEEccc----cCcchHHHHHHHHHhhccCCCCCceEEEEeCC-----CCCh---------------hHHHHHHHHHHhc
Q 028125 33 VIFIGQN----IDEEFSNQILATMLYLDSVDDSKRVYMYINGP-----GGDV---------------TPTLAIYDTMQSL 88 (213)
Q Consensus 33 iI~i~G~----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSp-----GG~v---------------~~~~~I~~~i~~~ 88 (213)
+|+++-+ ++.++...+.+.|..++.+++.+.|+|.=+.+ |+++ .....++..|..+
T Consensus 16 ~itln~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~~Fs~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 95 (249)
T d1sg4a1 16 VMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQS 95 (249)
T ss_dssp EEEECCTTTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEECCCCcCCCCHHHHHHHHHHHHHHHhCCCccEEEEEeccceeEecccccccccccccccccccchhhHHHHHhhhcC
Confidence 4667654 45566788888888887766666666643222 2222 2233577788899
Q ss_pred CCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Q 028125 89 KSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEK 168 (213)
Q Consensus 89 ~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~ 168 (213)
++|+++.+.|.|..+|.-++++||. |++.+++.|.+..|.....-.+.- . ....+. ++. ....
T Consensus 96 ~kpvIa~v~G~a~GgG~~lal~~D~--~ia~~~a~f~~~~pe~~~Gl~p~~-g----~~~~l~--------~~i--G~~~ 158 (249)
T d1sg4a1 96 NLVLVSAINGACPAGGCLVALTCDY--RILADNPRYCIGLNETQLGIIAPF-W----LKDTLE--------NTI--GHRA 158 (249)
T ss_dssp SSEEEEEECEEBCHHHHHHHTTSSE--EEEECCTTCCBSCCGGGGTCCCCH-H----HHHHHH--------HHH--CHHH
T ss_pred ccccchhhccccccccccccccccc--ceeecccccccccccccccccccc-c----cccccc--------ccc--cccc
Confidence 9999999999999999999999998 999999988766665432111110 0 011111 111 2333
Q ss_pred HHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 169 ITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 169 i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
..+++-.+..|+++||+++||||+|...++..
T Consensus 159 a~~lll~g~~~~a~~A~~~Glv~~v~~~~~l~ 190 (249)
T d1sg4a1 159 AERALQLGLLFPPAEALQVGIVDQVVPEEQVQ 190 (249)
T ss_dssp HHHHHHHTCCBCHHHHHHHTSSSEEECGGGHH
T ss_pred ccccccccccccHHHHHhhccccccCChHHHH
Confidence 34444446778999999999999999876543
No 18
>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.68 E-value=9e-08 Score=78.33 Aligned_cols=138 Identities=14% Similarity=0.126 Sum_probs=93.9
Q ss_pred cCcchHHHHHHHHHhhccCCCCCceEEEEeCCCC------ChhH-------------------HHHHHHHHHhcCCCeEE
Q 028125 40 IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGG------DVTP-------------------TLAIYDTMQSLKSPVGT 94 (213)
Q Consensus 40 I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG------~v~~-------------------~~~I~~~i~~~~~~v~t 94 (213)
++.++.+.+.+.|..++.+ +.+. |.|.+.|. ++.. ...++..|..+++|+++
T Consensus 27 ls~~~~~el~~al~~~~~d-~~~~--vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Ia 103 (258)
T d2fw2a1 27 LNTEVIKEMVNALNSAAAD-DSKL--VLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVV 103 (258)
T ss_dssp BCHHHHHHHHHHHHHHHHS-SCSE--EEEEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred CCHHHHHHHHHHHHHHHcC-CCEE--EEEecCccccccccccchhhhcccccccchhhHHHHHHHHHHHhhhccceeeee
Confidence 5556778888888877664 3443 34555553 3211 23456778889999999
Q ss_pred EEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCC-CChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHh
Q 028125 95 HCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDL 173 (213)
Q Consensus 95 ~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~-G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~ 173 (213)
.+.|.|..+|.-++++||- |++.+++.|.+.....+.. +-... ..+.+. .......+++
T Consensus 104 av~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~Gl~p~~g~~--------~~l~r~----------ig~~~a~~l~ 163 (258)
T d2fw2a1 104 SVNGPAIGLGASILPLCDL--VWANEKAWFQTPYTTFGQSPDGCSS--------ITFPKM----------MGKASANEML 163 (258)
T ss_dssp EECSCEETHHHHTGGGSSE--EEEETTCEEECCHHHHTCCCCTTHH--------HHHHHH----------HCHHHHHHHH
T ss_pred ecccccccccccccccccc--cceecccceeecccccccccccccc--------ccchhh----------cCccccchhh
Confidence 9999999999999999998 9999999987644333211 11000 011111 2334445566
Q ss_pred cCCceeCHHHHHHcCCceEecCCcccc
Q 028125 174 SRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 174 ~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
-.+..++++||+++||||+|...++..
T Consensus 164 l~g~~~~a~eA~~~Glv~~vv~~~~l~ 190 (258)
T d2fw2a1 164 IAGRKLTAREACAKGLVSQVFLTGTFT 190 (258)
T ss_dssp TTCCEEEHHHHHHTTSCSEEECSTTHH
T ss_pred ccCcccccccccccccccccccccccc
Confidence 567889999999999999999877654
No 19
>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]}
Probab=98.68 E-value=6.2e-08 Score=79.40 Aligned_cols=148 Identities=13% Similarity=0.198 Sum_probs=99.3
Q ss_pred cEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCCCC-------Ch--------------hHHHHHHHHH
Q 028125 32 RVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGG-------DV--------------TPTLAIYDTM 85 (213)
Q Consensus 32 ~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG-------~v--------------~~~~~I~~~i 85 (213)
.+|+|+-+ ++.++...+.+.|..++. ++.+ +++...+.|| ++ .....+++.|
T Consensus 15 ~~Itlnrp~~~Nal~~~~~~~l~~al~~~~~-~~~~-~vVl~g~~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~i 92 (261)
T d1ef8a_ 15 AVIEFNYGRKLNALSKVFIDDLMQALSDLNR-PEIR-CIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMI 92 (261)
T ss_dssp EEEEECCGGGTTCCCHHHHHHHHHHHHHTCS-TTCC-EEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHH
T ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHhC-CCCE-EEEEeccccchhhcccccccccccCCccccccccchhhhHHHH
Confidence 34666643 666777888888887753 3343 3344444443 22 2345889999
Q ss_pred HhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 028125 86 QSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQP 165 (213)
Q Consensus 86 ~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~ 165 (213)
.++++||++.+.|.|..+|..++++||. |++.+++.|.+.....+.....-- ...+ . +-..
T Consensus 93 ~~~~kPvIAav~G~a~GgG~~lal~cD~--ria~~~a~~~~pe~~~Gl~~~~~~-------~~~l--------~--r~~g 153 (261)
T d1ef8a_ 93 QKFPKPIISMVEGSVWGGAFEMIMSSDL--IIAASTSTFSMTPVNLGVPYNLVG-------IHNL--------T--RDAG 153 (261)
T ss_dssp HHCSSCEEEEECSEEETHHHHHHHHSSE--EEEETTCEEECCHHHHTCCCCHHH-------HHTT--------S--SSSC
T ss_pred HhCchhhhhcccccccchhhhhhhhhhh--hhhhHhHHHhhhhccccccccccc-------cccc--------c--cccC
Confidence 9999999999999999999999999998 999999988654433322111100 0000 0 1123
Q ss_pred HHHHHHHhcCCceeCHHHHHHcCCceEecCCcccc
Q 028125 166 FEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 200 (213)
Q Consensus 166 ~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~~ 200 (213)
.....+++-.+..|+++||+++||+|+|....+..
T Consensus 154 ~~~a~~~~l~g~~~~a~eA~~~Glv~~vv~~~~~~ 188 (261)
T d1ef8a_ 154 FHIVKELIFTASPITAQRALAVGILNHVVEVEELE 188 (261)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHTTSCSEEECHHHHH
T ss_pred ccccccccccCceEcHHHHHHcCCcceeeechhhh
Confidence 44445555456789999999999999998876643
No 20
>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]}
Probab=98.63 E-value=1.1e-07 Score=77.54 Aligned_cols=146 Identities=12% Similarity=0.104 Sum_probs=94.7
Q ss_pred CcEEEEccc-----cCcchHHHHHHHHHhhccCCCCCceEEEEeCCCC------Ch---------------hHHHHHHHH
Q 028125 31 ERVIFIGQN-----IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGG------DV---------------TPTLAIYDT 84 (213)
Q Consensus 31 ~~iI~i~G~-----I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG------~v---------------~~~~~I~~~ 84 (213)
..+|+++-+ ++.++...+.+.+..++.+++.+.|+| .+.|. ++ .....+++.
T Consensus 23 v~~itln~p~~~Nal~~~~~~el~~al~~~~~d~~v~~vvl--~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~l~~~ 100 (249)
T d1szoa_ 23 VLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVIL--TGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNN 100 (249)
T ss_dssp EEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEE--ECBTTBSBCEECGGGSCCSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcceEee--ecccccccccchhhhhhcccccchhhhhhhhhhhhhh
Confidence 344666543 556677888888888877665655555 44443 21 234567888
Q ss_pred HHhcCCCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCC--ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028125 85 MQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA--GAARGQADDIRNEADELLRVRDYIFKELSRKT 162 (213)
Q Consensus 85 i~~~~~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~--~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~t 162 (213)
|..+++||++.+.|.|.. |..++++||. |++.+++.|... |. .+.....-- ...+.+ .
T Consensus 101 i~~~~~pvIa~v~g~~~G-G~~l~l~~D~--ria~~~a~f~~~-pe~~~g~~p~~g~-------~~~l~r--------~- 160 (249)
T d1szoa_ 101 LLSIEVPVIAAVNGPVTN-APEIPVMSDI--VLAAESATFQDG-PHFPSGIVPGDGA-------HVVWPH--------V- 160 (249)
T ss_dssp HHHCCSCEEEEECSCBCS-STHHHHTSSE--EEEETTCEEECT-TSGGGTCCCTTTH-------HHHHHH--------H-
T ss_pred cccCcccceeeecccccc-cccccccccc--ccccCCcEEEEe-ecccccccccccc-------cccccc--------c-
Confidence 999999999999887765 6678888988 999999998532 22 111111000 011111 1
Q ss_pred CCCHHHHHHHhcCCceeCHHHHHHcCCceEecCCccc
Q 028125 163 GQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 199 (213)
Q Consensus 163 g~~~~~i~~~~~~~~~~sa~EA~~~GLiD~I~~~~~~ 199 (213)
+......+++-.+..++++||+++||||+|.+.++.
T Consensus 161 -ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l 196 (249)
T d1szoa_ 161 -LGSNRGRYFLLTGQELDARTALDYGAVNEVLSEQEL 196 (249)
T ss_dssp -HCHHHHHHHHHTTCEEEHHHHHHHTSCSEEECHHHH
T ss_pred -cCccceeeecccCCCCCHHHHHHhCCcCcccCHHHH
Confidence 233444555555678999999999999999887654
No 21
>d2f9ya1 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA {Escherichia coli [TaxId: 562]}
Probab=98.48 E-value=2e-07 Score=78.61 Aligned_cols=129 Identities=20% Similarity=0.201 Sum_probs=87.5
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCC----------ChhHHHHHHHHHHhcCCCeEEEEccccchHHHHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGG----------DVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG----------~v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I 107 (213)
|.++++.+..-...+...+. -.-+|+.+|+|||- ...+.-....++-.+++|+++++.|.+.|+|++.
T Consensus 130 G~~~p~~~rKa~r~~~~a~~--~~~Pii~~vDtpG~~~g~~~E~~g~~~~~a~~~~~~~~~~vP~i~vv~g~g~~gga~a 207 (316)
T d2f9ya1 130 GMPAPEGYRKALRLMQMAER--FKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALA 207 (316)
T ss_dssp GCCCHHHHHHHHHHHHHHHH--TTCCEEEEEEESCSCCSHHHHHTTHHHHHHHHHHHHHTCSSCEEEEEEEEEEHHHHHT
T ss_pred ccccHHHHHHHHHHHHHHHH--cCcceEEEEecCcccCCcccccccHHHHHHHHHHHHHhCCCceEEEEEhhhhchhhhh
Confidence 44555555554444443332 25689999999994 4555666667777788999999999999999999
Q ss_pred HhcCCCCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHHHHc
Q 028125 108 LAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEY 187 (213)
Q Consensus 108 ~~ag~~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~~ 187 (213)
++.+|. .+|.+|+.+.+-.|..- ..++- +......+..+.+. +|+++.+++
T Consensus 208 ~~~~d~--v~m~~~a~~svispEg~----------------------AsILw-kd~~~a~eaAealk----lta~dL~~l 258 (316)
T d2f9ya1 208 IGVGDK--VNMLQYSTYSVISPEGC----------------------ASILW-KSADKAPLAAEAMG----IIRPRLKEL 258 (316)
T ss_dssp TCCCSE--EEECTTCEEESSCHHHH----------------------HHHHS-SCSTTHHHHHHHHT----CSHHHHHTT
T ss_pred hhhhhH--HHHHhhhHHhhccchhh----------------------hhHhh-ccchhhcchHHHHh----hhhHHHHHc
Confidence 999998 99999999864433221 00000 01112223333333 789999999
Q ss_pred CCceEecCCc
Q 028125 188 GLIDRIIRPP 197 (213)
Q Consensus 188 GLiD~I~~~~ 197 (213)
|+||+|+...
T Consensus 259 giIDeII~EP 268 (316)
T d2f9ya1 259 KLIDSIIPEP 268 (316)
T ss_dssp TSCSCCCCCS
T ss_pred CchhhcccCC
Confidence 9999999653
No 22
>d1vrga2 c.14.1.4 (A:252-515) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]}
Probab=98.29 E-value=1.5e-06 Score=71.59 Aligned_cols=89 Identities=19% Similarity=0.250 Sum_probs=71.4
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEEccccchHHHHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I 107 (213)
|.++.+.++.....+...+.. .-+|+..+|+|| |-+..+-.+..++..+.+|.++++.|.+.++|++.
T Consensus 81 G~~~~~~a~Kaa~fi~lc~~~--~iPli~l~DtpGf~~G~~~E~~g~~~~ga~~~~a~a~~~vP~i~viir~~yG~g~~a 158 (264)
T d1vrga2 81 GVLDIDSSDKAARFIRFLDAF--NIPILTFVDTPGYLPGVAQEHGGIIRHGAKLLYAYSEATVPKITVILRKAYGGAYIA 158 (264)
T ss_dssp GCBCHHHHHHHHHHHHHHHHT--TCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHH
T ss_pred cchhhhhHHHHHHHHHHHHHh--CCceEEEeecccccccHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEeCCcccHHhhh
Confidence 678877777777766655443 458999999999 55778889999999999999999999999998877
Q ss_pred Hhc----CCCCcEeeccCCeEEEeCCC
Q 028125 108 LAG----GEKGNRSAMPLSRIALDSPA 130 (213)
Q Consensus 108 ~~a----g~~~~r~~~p~s~i~iH~p~ 130 (213)
+++ ++. .++.|++.+.+-.|.
T Consensus 159 m~~~~~~~d~--~~awP~a~~~vm~pe 183 (264)
T d1vrga2 159 MGSKHLGADM--VLAWPSAEIAVMGPE 183 (264)
T ss_dssp TTCGGGTCSE--EEECTTCEEESSCHH
T ss_pred ccCCccCCCe--eeeccceeEEecCHH
Confidence 764 444 888899888766654
No 23
>d1on3a2 c.14.1.4 (A:261-524) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]}
Probab=98.15 E-value=3.9e-06 Score=68.92 Aligned_cols=144 Identities=19% Similarity=0.164 Sum_probs=92.1
Q ss_pred ccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEEccccchHHHH
Q 028125 37 GQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGF 106 (213)
Q Consensus 37 ~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~ 106 (213)
.|.++.+.++.....+...+. -.-+|+..+|+|| |.+..+-.+..++..+.+|.++++.+.+.++|++
T Consensus 80 ~G~~~~~~a~Kaarfi~lc~~--~~iPlv~l~D~pGf~~G~~~E~~g~i~~ga~~~~a~a~~~vP~itvi~rkayG~g~~ 157 (264)
T d1on3a2 80 SGCLDINASDKAAEFVNFCDS--FNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGSYL 157 (264)
T ss_dssp GGCBCHHHHHHHHHHHHHHHH--TTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHH
T ss_pred ccccChHHHHHHHHHHHHHHh--cCCceEEEeccccccccHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeccccCcccc
Confidence 556666777776666655443 2568999999999 6677888999999999999999999999998888
Q ss_pred HHhcCC--CCcEeeccCCeEEEeCCCccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCceeCHHHH
Q 028125 107 LLAGGE--KGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 184 (213)
Q Consensus 107 I~~ag~--~~~r~~~p~s~i~iH~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA 184 (213)
.++... ....++.|++.+.+-.|.... .+. ..+++....+.- ++ ..+.+++..+ .+-++-.|
T Consensus 158 am~g~~~~~d~~~aWP~A~~~vMg~Egaa-----~v~-~~~el~a~~~~~----~~----~~~~~~e~~~--~~~~p~~a 221 (264)
T d1on3a2 158 AMCNRDLGADAVYAWPSAEIAVMGAEGAA-----NVI-FRKEIKAADDPD----AM----RAEKIEEYQN--AFNTPYVA 221 (264)
T ss_dssp TTTCGGGTCSEEEECTTCEEESSCHHHHH-----HHH-THHHHHHSSCHH----HH----HHHHHHHHHH--HHSSHHHH
T ss_pred ccccccCChhheeeHHhhHhhhccHHHHH-----HHH-Hhhhhhhhhhhh----hh----hHHHHHHHHH--HhcCHHHH
Confidence 887532 123788888887655443210 000 001111100000 00 0112222221 22367889
Q ss_pred HHcCCceEecCCcc
Q 028125 185 LEYGLIDRIIRPPR 198 (213)
Q Consensus 185 ~~~GLiD~I~~~~~ 198 (213)
.+.|.+|+|+++.+
T Consensus 222 A~~g~iD~VIdP~e 235 (264)
T d1on3a2 222 AARGQVDDVIDPAD 235 (264)
T ss_dssp HHTTSSSEECCGGG
T ss_pred HHcCCCCeeECHHH
Confidence 99999999998865
No 24
>d1pixa3 c.14.1.4 (A:288-586) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]}
Probab=98.08 E-value=3.6e-06 Score=70.31 Aligned_cols=74 Identities=12% Similarity=0.046 Sum_probs=59.9
Q ss_pred EEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC---C-------ChhHHHHHHHHHHhcCCCeEEEEccccchHH
Q 028125 35 FIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG---G-------DVTPTLAIYDTMQSLKSPVGTHCVGFAYHLA 104 (213)
Q Consensus 35 ~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG---G-------~v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa 104 (213)
..+|.|+.+.++.....+..++.. .-+|+..+|+|| | .+..+-.+..++..+.+|.++++.|.++++|
T Consensus 94 ~~~G~l~~~~a~K~~rfi~lc~~~--~iPlv~l~D~pGf~~g~~~E~~g~~r~ga~~~~a~~~~~VP~isvi~r~~~G~a 171 (299)
T d1pixa3 94 GIGGKLYRQGLVKMNEFVTLCARD--RLPIVWIQDTTGIDVGNDAEKAELLGLGQSLIYSIQTSHIPQFEITLRKGTAAA 171 (299)
T ss_dssp EETTEECHHHHHHHHHHHHHHHHT--TCCEEEEECCCEECCSHHHHHTTHHHHHHHHHHHHHTCCCCEEEEECSEEETTH
T ss_pred CCCCccCHHHHHHHHHHHHHHHHc--CCeEEEEEeCCCcccchHHHhhhHHHHHHHHHHHHHhhcceeEEEEeccccccc
Confidence 458889998888877777655443 458999999999 3 4667778888999999999999999999988
Q ss_pred HHHHhc
Q 028125 105 GFLLAG 110 (213)
Q Consensus 105 ~~I~~a 110 (213)
++.++.
T Consensus 172 ~~am~g 177 (299)
T d1pixa3 172 HYVLGG 177 (299)
T ss_dssp HHHTTC
T ss_pred cccccc
Confidence 886664
No 25
>d1xnya2 c.14.1.4 (A:268-530) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]}
Probab=97.99 E-value=9.1e-06 Score=66.64 Aligned_cols=91 Identities=16% Similarity=0.123 Sum_probs=69.9
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEEccccchHHHHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I 107 (213)
|.|+.+.+......+...+.. .-+|+..+|+|| |.+..+-.+..++.++++|.++++.+.+.++|++.
T Consensus 79 G~~~~~~a~Ka~~fi~lc~~~--~iPli~l~d~pGf~~G~~~E~~g~~~~ga~~~~a~a~~~vPkitvi~~~~~Gga~~~ 156 (263)
T d1xnya2 79 GCLDITASEKAARFVRTCDAF--NVPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITVITRKAFGGAYDV 156 (263)
T ss_dssp GCBCHHHHHHHHHHHHHHHHT--TCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHH
T ss_pred CCcchhhHHHHHHHHHHHHHh--CCceEEeecccccccchhHHHHhHHHHHHHHHHHHHccCCCeEEEEecCccccceec
Confidence 778888787777766655443 558999999999 44667888999999999999999999999888777
Q ss_pred HhcCC--CCcEeeccCCeEEEeCCC
Q 028125 108 LAGGE--KGNRSAMPLSRIALDSPA 130 (213)
Q Consensus 108 ~~ag~--~~~r~~~p~s~i~iH~p~ 130 (213)
+++.. ....++.|++.+.+-.|.
T Consensus 157 m~~~~~~~d~~~awP~a~~gvm~pe 181 (263)
T d1xnya2 157 MGSKHLGADLNLAWPTAQIAVMGAQ 181 (263)
T ss_dssp TTCGGGTCSEEEECTTCEEESSCHH
T ss_pred cCCcccCCcEEEEcchhhhhccCHH
Confidence 65321 123889999988765554
No 26
>d2a7sa2 c.14.1.4 (A:278-548) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.97 E-value=2.4e-06 Score=70.48 Aligned_cols=91 Identities=18% Similarity=0.123 Sum_probs=70.2
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEEccccchHHHHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~~G~aaSaa~~I 107 (213)
|.++.+.++...+.+...+. ..-+|+..+|+|| |.+..+-.+..++..++.|.++++.+.+.++|++.
T Consensus 84 G~~~~~~~~Ka~rfi~lc~~--~~iPlv~l~dtpGf~~G~~~E~~g~~~~ga~~~~a~a~~~vP~isvi~~~~~G~~~~a 161 (271)
T d2a7sa2 84 GCLDINASEKAARFVRTCDC--FNIPIVMLVDVPGFLPGTDQEYNGIIRRGAKLLYAYGEATVPKITVITRKAYGGAYCV 161 (271)
T ss_dssp GCBCHHHHHHHHHHHHHHHH--TTCCEEEEEEECCBCCCHHHHHHCHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHH--hCCceEEeechhhhhhhccHHHhhHHHHHHHHHHHHHhCCCCeEEEEeCCccchhhhh
Confidence 67777777776666654433 2568999999999 45778889999999999999999999999988777
Q ss_pred HhcCC--CCcEeeccCCeEEEeCCC
Q 028125 108 LAGGE--KGNRSAMPLSRIALDSPA 130 (213)
Q Consensus 108 ~~ag~--~~~r~~~p~s~i~iH~p~ 130 (213)
+++.. ....++.|++.+.+-.|.
T Consensus 162 m~~~~~~~d~~~AwP~A~igvMgpe 186 (271)
T d2a7sa2 162 MGSKDMGCDVNLAWPTAQIAVMGAS 186 (271)
T ss_dssp TTCGGGTCSEEEECTTCEEESSCHH
T ss_pred hcccccccceEEEecceeEeecCHH
Confidence 76421 123789999988765554
No 27
>d1uyra2 c.14.1.4 (A:1815-2218) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.04 E-value=0.0012 Score=56.41 Aligned_cols=93 Identities=14% Similarity=0.091 Sum_probs=65.2
Q ss_pred ccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCC----------CChhHHHHHHHHHHhcCCCeEEEEc--cccchHH
Q 028125 37 GQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG----------GDVTPTLAIYDTMQSLKSPVGTHCV--GFAYHLA 104 (213)
Q Consensus 37 ~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpG----------G~v~~~~~I~~~i~~~~~~v~t~~~--G~aaSaa 104 (213)
+|.+.++++......+..+.. ...-+|.+..|+|| |-+..+-.|.+++..++.|+++++. |.+. +|
T Consensus 107 Ggv~~p~sA~K~A~~i~d~cd-~~~lPLi~l~D~pGF~~G~~~E~~gilr~GA~iv~A~~~~~vP~i~vI~~~g~~~-GG 184 (404)
T d1uyra2 107 GQVWHPNSAFKTAQAINDFNN-GEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELR-GG 184 (404)
T ss_dssp TTCBCHHHHHHHHHHHHHHHT-TSCCCEEECCCCCCBCC------CTHHHHHHHHHHHHHTCCSCEEEEECTTCEEE-HH
T ss_pred CCccCchHHHHHHHHHHHhhh-ccccceEEeecCCcccCcHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeCCcccc-hh
Confidence 345556667776666654432 23569999999999 5578899999999999999999995 4444 45
Q ss_pred HHHHhcCCCC----cEeeccCCeEEEeCCCc
Q 028125 105 GFLLAGGEKG----NRSAMPLSRIALDSPAG 131 (213)
Q Consensus 105 ~~I~~ag~~~----~r~~~p~s~i~iH~p~~ 131 (213)
.++.+.+... ..|+.|++.+++-.|.+
T Consensus 185 a~vv~~~~~~~~~~~~yAwP~a~~gVm~pEG 215 (404)
T d1uyra2 185 SWVVVDPTINADQMEMYADVNARAGVLEPQG 215 (404)
T ss_dssp HHHTTCGGGGTTTEEEEEETTCEEESSCHHH
T ss_pred hhhcccCccCCccceEEECCccccccCChhh
Confidence 5555544321 13678999888777654
No 28
>d1pixa2 c.14.1.4 (A:1-287) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]}
Probab=96.83 E-value=0.0017 Score=53.27 Aligned_cols=90 Identities=11% Similarity=0.031 Sum_probs=64.5
Q ss_pred cccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHH-----------HHHHH--HHhcCCCeEEEEccccchHH
Q 028125 38 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTL-----------AIYDT--MQSLKSPVGTHCVGFAYHLA 104 (213)
Q Consensus 38 G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~-----------~I~~~--i~~~~~~v~t~~~G~aaSaa 104 (213)
|.+++...+.+...+..+... .-+++..++|||+.+.... .+++. +....+|+++++.|.|.++|
T Consensus 118 Gs~~~~~~~K~~r~~~lA~~~--~lP~I~l~ds~Ga~~~~~~e~~~~~~~~g~~~~~~a~ls~~~VP~Isvv~G~~~gGg 195 (287)
T d1pixa2 118 GAWVPGQAECLLRASDTAKTL--HVPLVYVLNCSGVKFDEQEKVYPNRRGGGTPFFRNAELNQLGIPVIVGIYGTNPAGG 195 (287)
T ss_dssp TEECTTHHHHHHHHHHHHHHH--TCCEEEEECCCEECGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECSEEETHH
T ss_pred ccchhhHHHHHHHHHHhhhhc--CCCEEEEecCCcccCCcchhhccchhhHHHHHHHHHHHhhcCCCeEEEecCCccccc
Confidence 455566677777766544332 4589999999998875433 23332 33456899999999999999
Q ss_pred HHHHhcCCCCcEeeccCCeEEEeCCCc
Q 028125 105 GFLLAGGEKGNRSAMPLSRIALDSPAG 131 (213)
Q Consensus 105 ~~I~~ag~~~~r~~~p~s~i~iH~p~~ 131 (213)
+|.+++++. .++.+++.+.+-.|..
T Consensus 196 Ay~~~~~~~--i~~~~~a~i~~~Gp~v 220 (287)
T d1pixa2 196 GYHSISPTV--IIAHEKANMAVGGAGI 220 (287)
T ss_dssp HHHHHSSSE--EEEETTCEEESCCCTT
T ss_pred eecccccee--EEecCCeEEEEECHHH
Confidence 998887776 7788889888877754
No 29
>d1on3a1 c.14.1.4 (A:8-260) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]}
Probab=94.97 E-value=0.013 Score=46.87 Aligned_cols=86 Identities=12% Similarity=0.097 Sum_probs=60.8
Q ss_pred cCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHH-------H-HHHHHhc-CCCeEEEEccccchHHHHHHhc
Q 028125 40 IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLA-------I-YDTMQSL-KSPVGTHCVGFAYHLAGFLLAG 110 (213)
Q Consensus 40 I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~-------I-~~~i~~~-~~~v~t~~~G~aaSaa~~I~~a 110 (213)
++....+.+......+... .-+++.+++|-|+.+.++.. + +...+.+ ..|+++++.|.|+.++++.++.
T Consensus 105 ~g~~~~~K~~~a~e~A~~~--~lPlV~l~~sgG~r~~eg~~~l~~~~~~~~~~~~ls~~vP~i~vv~Gp~~GG~a~~~~~ 182 (253)
T d1on3a1 105 AGETQSTKVVETMEQALLT--GTPFLFFYDSGGARIQEGIDSLSGYGKMFFANVKLSGVVPQIAIIAGPCAGGASYSPAL 182 (253)
T ss_dssp BCHHHHHHHHHHHHHHHHH--TCCEEEEEEECSBCGGGTHHHHHHHHHHHHHHHHHTTTSCEEEEEEEEEESGGGHHHHH
T ss_pred ceecccchhhhhHHHHhhc--CCCeEEEEecCCCcccccceeccccceehHHHHHHhccceEEEEEecCcccceeeccch
Confidence 3334456777666544332 45899999999998765532 2 2222222 2799999999999999999999
Q ss_pred CCCCcEeeccCCeEEEeCC
Q 028125 111 GEKGNRSAMPLSRIALDSP 129 (213)
Q Consensus 111 g~~~~r~~~p~s~i~iH~p 129 (213)
++. .++.+++.+.+-.|
T Consensus 183 ~d~--vi~~~~a~i~~aGP 199 (253)
T d1on3a1 183 TDF--IIMTKKAHMFITGP 199 (253)
T ss_dssp SSE--EEEETTCEEESSCH
T ss_pred hhh--eeccccceEEecCc
Confidence 987 88899988875554
No 30
>d1xnya1 c.14.1.4 (A:10-267) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]}
Probab=94.72 E-value=0.015 Score=46.55 Aligned_cols=84 Identities=14% Similarity=0.076 Sum_probs=56.3
Q ss_pred hHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHH-------HHHHHhcC--CCeEEEEccccchHHHHHHhcCCCC
Q 028125 44 FSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAI-------YDTMQSLK--SPVGTHCVGFAYHLAGFLLAGGEKG 114 (213)
Q Consensus 44 ~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I-------~~~i~~~~--~~v~t~~~G~aaSaa~~I~~ag~~~ 114 (213)
..+.+......+... .-+++.+++|.|+.+.++..- ...+..+. .|+++++.|.|++++++.++.++.
T Consensus 108 ~~~K~~r~~e~A~~~--~lPlI~l~dsgGarm~e~~~~~~~~~~~~~~~~~~s~~vP~I~vv~G~~~gG~a~~~~~~~~- 184 (258)
T d1xnya1 108 YGQKIVKVMDFALKT--GCPVVGINDSGGARIQEGVASLGAYGEIFRRNTHASGVIPQISLVVGPCAGGAVYSPAITDF- 184 (258)
T ss_dssp HHHHHHHHHHHHHHH--TCCEEEEECCCSBCGGGTHHHHHHHHHHHHHHHHTTTTSCEEEEECSEEEGGGGHHHHHSSE-
T ss_pred hHHHHHHHHHHHHHc--CCceEEEecCCCcccCcccccccchhHHHHHHHHHcCCCCEEEEEcCCcChhHHHHHHhccc-
Confidence 356666655544332 458999999999987555432 22223333 799999999999999988887765
Q ss_pred cEeeccCCeEEEeCCC
Q 028125 115 NRSAMPLSRIALDSPA 130 (213)
Q Consensus 115 ~r~~~p~s~i~iH~p~ 130 (213)
...+.+++.+++-.|.
T Consensus 185 vim~~~~a~i~~aGP~ 200 (258)
T d1xnya1 185 TVMVDQTSHMFITGPD 200 (258)
T ss_dssp EEEETTTCEEESSCHH
T ss_pred hhhcccceEEEecCHH
Confidence 1444567888766653
No 31
>d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]}
Probab=94.65 E-value=0.025 Score=45.34 Aligned_cols=82 Identities=12% Similarity=0.063 Sum_probs=56.3
Q ss_pred hHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHH----------HHHHHHhcCCCeEEEEccccchHHHH-HHhcCC
Q 028125 44 FSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLA----------IYDTMQSLKSPVGTHCVGFAYHLAGF-LLAGGE 112 (213)
Q Consensus 44 ~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~----------I~~~i~~~~~~v~t~~~G~aaSaa~~-I~~ag~ 112 (213)
..+.+...+..+.+. .-+++.+..|.|+.+.++.. ....++....|+++++.|.|+.++++ ++++++
T Consensus 116 ~~~Ki~~a~e~A~~~--~lPlI~~~~sgG~r~~e~~~sl~~~~~~~~~~~~~~~~~vP~I~v~~g~~~GG~aa~~~~~~d 193 (263)
T d2f9yb1 116 VGARFVRAVEQALED--NCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGD 193 (263)
T ss_dssp HHHHHHHHHHHHHHH--TCCEEEEEEESSBCGGGTHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCS
T ss_pred hhhHHhHHHHHHHHc--CCCeEEEecCCCcccccccchhhcchhHHHHHHHHHhCCCceEEEecCCcchHHHhhhhhcCc
Confidence 457777766654332 45788889999988654431 12334455689999999999988765 555666
Q ss_pred CCcEeeccCCeEEEeCC
Q 028125 113 KGNRSAMPLSRIALDSP 129 (213)
Q Consensus 113 ~~~r~~~p~s~i~iH~p 129 (213)
. +++.++|.+++-.|
T Consensus 194 ~--i~~~~~s~i~~aGP 208 (263)
T d2f9yb1 194 L--NIAEPKALIGFAGP 208 (263)
T ss_dssp E--EEECTTCBEESSCH
T ss_pred e--EeeecceeeeccCH
Confidence 5 78888888876544
No 32
>d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]}
Probab=93.11 E-value=0.044 Score=43.60 Aligned_cols=81 Identities=14% Similarity=0.012 Sum_probs=53.3
Q ss_pred hHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHH-------HHHHHH--HhcCCCeEEEEccccchHHHHHHhcCCCC
Q 028125 44 FSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTL-------AIYDTM--QSLKSPVGTHCVGFAYHLAGFLLAGGEKG 114 (213)
Q Consensus 44 ~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~-------~I~~~i--~~~~~~v~t~~~G~aaSaa~~I~~ag~~~ 114 (213)
..+.+......+.+. .-+++..++|.|+.+.++. .++..+ .+-..|+++++.|.|++++++.+..++.
T Consensus 106 ~~~K~~r~~e~A~~~--~~P~I~~~dsgG~r~~e~~~~l~~~~~~~~~~~~~s~~iP~I~vv~G~~~gG~a~~~~~~d~- 182 (251)
T d1vrga1 106 HAKKIVKLLDLALKM--GIPVIGINDSGGARIQEGVDALAGYGEIFLRNTLASGVVPQITVIAGPCAGGAVYSPALTDF- 182 (251)
T ss_dssp HHHHHHHHHHHHHHH--TCCEEEEEEECSBCGGGTHHHHHHHHHHHHHHHHHTTTSCEEEEEEEEEBGGGGHHHHHSSE-
T ss_pred HHHHHHHHHHHHHHc--CCCEEEEEcCCCccccccccccccchHHHHHHHHHCCCCCEEEEEccCccccceehhhhCce-
Confidence 356666655543332 4589999999999765433 222222 2234799999999999999988888876
Q ss_pred cEeec-cCCeEEEeC
Q 028125 115 NRSAM-PLSRIALDS 128 (213)
Q Consensus 115 ~r~~~-p~s~i~iH~ 128 (213)
.++. +++.+.+-.
T Consensus 183 -~im~~~~a~i~~aG 196 (251)
T d1vrga1 183 -IVMVDQTARMFITG 196 (251)
T ss_dssp -EEEETTTCBCBSSC
T ss_pred -EEEEccceeEEecC
Confidence 5554 556665433
No 33
>d2a7sa1 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=92.60 E-value=0.086 Score=41.99 Aligned_cols=82 Identities=13% Similarity=0.082 Sum_probs=53.4
Q ss_pred hHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHH-------HHHHHH--HhcCCCeEEEEccccchHHHHHHhcCCCC
Q 028125 44 FSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTL-------AIYDTM--QSLKSPVGTHCVGFAYHLAGFLLAGGEKG 114 (213)
Q Consensus 44 ~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~-------~I~~~i--~~~~~~v~t~~~G~aaSaa~~I~~ag~~~ 114 (213)
..+.+......+.+. .-+++..++|-|+.+.++. .++..+ .+-..|+++++.|.|++++++.++.++.
T Consensus 109 ~g~K~~ra~e~A~~~--~lP~I~l~dsgGar~~eg~~~~~~~~~~~~~~~~~~~~vP~I~~v~G~~~gG~a~~~~~~d~- 185 (258)
T d2a7sa1 109 YGEKIVKVQELAIKT--GRPLIGINDGAGARIQEGVVSLGLYSRIFRNNILASGVIPQISLIMGAAAGGHVYSPALTDF- 185 (258)
T ss_dssp HHHHHHHHHHHHHHH--TCCEEEEECCCSBCGGGCTHHHHHHHHHHHHHHHHTTTSCEEEEECSCCBSGGGHHHHHSSE-
T ss_pred hhhHHHHHHHHHHhc--CCceEEEeccCCcccccccccccchhhHHHHHHHHcCCCCEEEEEecCcccHHHHHHHhccc-
Confidence 356666655543322 4588899999998864422 222222 2234799999999999999888887775
Q ss_pred cEee-ccCCeEEEeCC
Q 028125 115 NRSA-MPLSRIALDSP 129 (213)
Q Consensus 115 ~r~~-~p~s~i~iH~p 129 (213)
.+| .+++.+.+-.|
T Consensus 186 -~vm~~~~a~i~~aGP 200 (258)
T d2a7sa1 186 -VIMVDQTSQMFITGP 200 (258)
T ss_dssp -EEEEBTTBBCBSSCH
T ss_pred -eEeecCceEEEccCh
Confidence 555 55677765444
No 34
>d1fc6a4 c.14.1.2 (A:78-156,A:249-463) Photosystem II D1 C-terminal processing protease {Algae (Scenedesmus obliquus) [TaxId: 3088]}
Probab=88.46 E-value=0.48 Score=37.85 Aligned_cols=81 Identities=9% Similarity=0.080 Sum_probs=59.2
Q ss_pred cCcEEEEcc-ccCcchHHHHHHHHHhhccCCCCCceEEEE-eCCCCChhHHHHHHHHHHhcC------------------
Q 028125 30 RERVIFIGQ-NIDEEFSNQILATMLYLDSVDDSKRVYMYI-NGPGGDVTPTLAIYDTMQSLK------------------ 89 (213)
Q Consensus 30 ~~~iI~i~G-~I~~~~~~~l~~~l~~l~~~~~~~~I~l~I-NSpGG~v~~~~~I~~~i~~~~------------------ 89 (213)
.++|=||.= ..++...+.+.+.+..+... +.+.++|-+ +.|||.+..+..+...+-.-+
T Consensus 105 ~~~IGYi~i~~F~~~~~~~~~~~l~~l~~~-~~~~lIiDLR~N~GG~~~~a~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 183 (294)
T d1fc6a4 105 KQQLGYVRLATFNSNTTAAAQQAFTELSKQ-GVAGLVLDIRNNGGGLFPAGVNVARMLVDRGDLVLIADSQGIRDIYSAD 183 (294)
T ss_dssp SSCEEEEEECCBSTTHHHHHHHHHHHHHHT-TCSEEEEECTTCCCBCHHHHHHHHHHHCSSSEEEEEEETTEEEEEEECC
T ss_pred CCcEEEEEEcccCchhHHHHHHHHHHHHHC-CCcEEEEEeecCcccchhhhHHHHHhhcccccceEEEEeccccceeccc
Confidence 445544431 13555677788888777664 378899988 779999999999887654321
Q ss_pred -------CCeEEEEccccchHHHHHHhcC
Q 028125 90 -------SPVGTHCVGFAYHLAGFLLAGG 111 (213)
Q Consensus 90 -------~~v~t~~~G~aaSaa~~I~~ag 111 (213)
.|+++.+.+.++|+|-+++.+-
T Consensus 184 ~~~~~~~~pv~VL~~~~TaSaaE~~a~~l 212 (294)
T d1fc6a4 184 GNSIDSATPLVVLVNRGTASASEVLAGAL 212 (294)
T ss_dssp SCCSCSSSCEEEEECTTCCTHHHHHHHHH
T ss_pred cccccccceEEEEecCCccchHHHHHHHh
Confidence 4899999999999998888754
No 35
>d1uyra1 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=76.39 E-value=4 Score=33.13 Aligned_cols=39 Identities=13% Similarity=0.055 Sum_probs=35.0
Q ss_pred CCeEEEEccccchHHHHHHhcCCCCcEeeccCCeEEEeCCC
Q 028125 90 SPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA 130 (213)
Q Consensus 90 ~~v~t~~~G~aaSaa~~I~~ag~~~~r~~~p~s~i~iH~p~ 130 (213)
.|+++++.|.|..+++|+..-|+. .+|.++|.+.+-.|.
T Consensus 241 iptis~v~G~~vG~gAyl~~L~d~--vIm~~~s~i~ltGp~ 279 (333)
T d1uyra1 241 IFTITLVTCRSVGIGAYLVRLGQR--AIQVEGQPIILTGAP 279 (333)
T ss_dssp SCEEEEESSCEETHHHHHHHHTCC--EEEETTCCEESSCHH
T ss_pred CCEEEEEeCCccccceeecccccE--EEEeCCceEEeeCHH
Confidence 799999999999999999999998 899999887766554
No 36
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]}
Probab=62.66 E-value=16 Score=23.37 Aligned_cols=81 Identities=10% Similarity=0.056 Sum_probs=48.8
Q ss_pred cCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCC-CCChhHHHHHHHHHHhcC-CCeEEEEccccchHHHHH
Q 028125 30 RERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGP-GGDVTPTLAIYDTMQSLK-SPVGTHCVGFAYHLAGFL 107 (213)
Q Consensus 30 ~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSp-GG~v~~~~~I~~~i~~~~-~~v~t~~~G~aaSaa~~I 107 (213)
+.-+|.+.|+++...+..+.+.+..+-.+.+.+.|.|.+..- .=+......+....+.++ ..+..++.|..-..--++
T Consensus 13 ~~~vv~l~G~l~~~~~~~~~~~l~~~~~~~~~~~vvid~~~v~~iDssg~~~l~~~~~~~~~~~~~l~l~~~~~~v~~~l 92 (110)
T d1vc1a_ 13 DKAIVRVQGDIDAYNSSELKEQLRNFISTTSKKKIVLDLSSVSYMDSAGLGTLVVILKDAKINGKEFILSSLKESISRIL 92 (110)
T ss_dssp TEEEEEEESCBSTTTHHHHHHHHHHHHHHCCCSEEEEEEEECCCBCHHHHHHHHHHHHHHHHTTCEEEEESCCHHHHHHH
T ss_pred CEEEEEEEEEEEhHHHHHHHHHHHHHHhcCCCCEEEEEEECCCccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence 345788999999999999999988654445567788877553 334444444444444443 233444445444444444
Q ss_pred Hhc
Q 028125 108 LAG 110 (213)
Q Consensus 108 ~~a 110 (213)
-..
T Consensus 93 ~~~ 95 (110)
T d1vc1a_ 93 KLT 95 (110)
T ss_dssp HHH
T ss_pred HHc
Confidence 333
No 37
>d2csua2 c.23.4.1 (A:130-290) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=56.44 E-value=20 Score=25.34 Aligned_cols=65 Identities=20% Similarity=0.342 Sum_probs=40.2
Q ss_pred cEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccccch
Q 028125 32 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYH 102 (213)
Q Consensus 32 ~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~aaS 102 (213)
.+|.+.++.+.. +.+-|.++.+++..+.|.|++.+-+ +-..-......... .+||+++..|....
T Consensus 49 ~~vs~Gn~~~~~----~~d~l~~l~~D~~t~~i~l~~E~~~-~~~~f~~~~r~~~~-~Kpvv~~k~G~s~~ 113 (161)
T d2csua2 49 KFISVGNMADVD----FAELMEYLADTEEDKAIALYIEGVR-NGKKFMEVAKRVTK-KKPIIALKAGKSES 113 (161)
T ss_dssp EEEECTTCCSSC----HHHHHHHHTTCSSCCEEEEEESCCS-CHHHHHHHHHHHHH-HSCEEEEECC----
T ss_pred EEEecCCccccC----HHHHHHHHhcCCCCcEEEEEecCCc-CHHHHHHHHHHHhc-cCCeeEEEeecccc
Confidence 567788777664 3455666667788999999999554 43333333333332 37999988777543
No 38
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]}
Probab=45.18 E-value=13 Score=24.05 Aligned_cols=38 Identities=3% Similarity=0.135 Sum_probs=27.7
Q ss_pred cEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEe
Q 028125 32 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYIN 69 (213)
Q Consensus 32 ~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~IN 69 (213)
-++.+.|+++...+..+.+++..+-.....+.|.|.+.
T Consensus 13 ~vv~l~G~L~~~~~~~~~~~l~~~~~~~~~~~iilDls 50 (115)
T d1th8b_ 13 LIVRLSGELDHHTAEELREQVTDVLENRAIRHIVLNLG 50 (115)
T ss_dssp EEEEEEEEESHHHHHHHHHHHHHHHHSSCCCEEEEEEE
T ss_pred EEEEEEEEEEHHHHHHHHHHHHHHHhcCCCCEEEEEEE
Confidence 46779999999999999998875433444566666553
No 39
>d1h4xa_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Bacillus sphaericus [TaxId: 1421]}
Probab=44.14 E-value=11 Score=24.34 Aligned_cols=37 Identities=16% Similarity=0.016 Sum_probs=27.1
Q ss_pred cEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEE
Q 028125 32 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 68 (213)
Q Consensus 32 ~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~I 68 (213)
-+|.+.|+++-..++.+.+++..+-.+++.+.+.|.+
T Consensus 12 ~vv~~~G~L~~~~a~~~~~~~~~~i~~~~~~~vvlD~ 48 (111)
T d1h4xa_ 12 VVIRLFGELDHHAVEQIRAKISTAIFQGAVTTIIWNF 48 (111)
T ss_dssp EEEEEEEEECHHHHHHHHHHHHHHHHHTSCSEEEEEE
T ss_pred EEEEEEEEEEHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 4688999999999999988887543334456676655
No 40
>d1oi7a2 c.23.4.1 (A:122-288) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=41.83 E-value=20 Score=25.37 Aligned_cols=50 Identities=12% Similarity=0.027 Sum_probs=30.3
Q ss_pred HHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHh--cCCCeEEEEccccch
Q 028125 49 LATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQS--LKSPVGTHCVGFAYH 102 (213)
Q Consensus 49 ~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~--~~~~v~t~~~G~aaS 102 (213)
.+.|.++.+++..+.|.+++.+-+ ++....+..++ .++|++++..|..+.
T Consensus 67 ~d~l~~~~~D~~t~vI~l~~E~~~----~~~~f~~~~~~~~~~kpvvv~~~g~~a~ 118 (167)
T d1oi7a2 67 KDLLPLFNEDPETEAVVLIGEIGG----SDEEEAAAWVKDHMKKPVVGFIGGRSAP 118 (167)
T ss_dssp HHHHHHHHTCTTCCEEEEEECSSS----SHHHHHHHHHHHHCCSCEEEEESCC---
T ss_pred HHHHHHHhhccccceeeEeeeccc----hHHHHHHHHHHHhcCCceEEEecccccc
Confidence 455666677888999999998554 33334444433 346777777665543
No 41
>d1k32a4 c.14.1.2 (A:680-762,A:854-1061) Tricorn protease {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=41.01 E-value=46 Score=25.28 Aligned_cols=78 Identities=8% Similarity=0.054 Sum_probs=48.7
Q ss_pred ccCcEEEEcc-ccCcchHHHHHHHHHhhccCCCCCceEEEE-eCCCCChhHHHHHHHHHHh-------------------
Q 028125 29 YRERVIFIGQ-NIDEEFSNQILATMLYLDSVDDSKRVYMYI-NGPGGDVTPTLAIYDTMQS------------------- 87 (213)
Q Consensus 29 ~~~~iI~i~G-~I~~~~~~~l~~~l~~l~~~~~~~~I~l~I-NSpGG~v~~~~~I~~~i~~------------------- 87 (213)
.+.+|=||.= ..+......+.+.+... ...+.++|-+ +-+||.+.+.+ ...+..
T Consensus 105 ~~g~IGYi~i~~f~~~~~~~~~~~l~~~---~~~~~lIiDLR~N~GG~l~~~i--~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (291)
T d1k32a4 105 SKGTIGYIHIPDMGMMGLNEFYRLFINE---SSYQGLIVDVRFNGGGFVSQLI--IEKLMNKRIGYDNPRRGTLSPYPTN 179 (291)
T ss_dssp TTTSEEEEECCCBSHHHHHHHHHHHHHH---TTSSEEEEECTTCCCBSCHHHH--HHHHTCBCCEEEEESSSCCEEESTT
T ss_pred cCCeEEEEEEccCCCchHHHHHHHHHHh---cCCceEEEecccCcchhHHHHH--HHHhccCCeEEEecCcCccccCCcc
Confidence 4556655531 13344455565555432 3578899999 56677766543 333321
Q ss_pred -cCCCeEEEEccccchHHHHHHhcC
Q 028125 88 -LKSPVGTHCVGFAYHLAGFLLAGG 111 (213)
Q Consensus 88 -~~~~v~t~~~G~aaSaa~~I~~ag 111 (213)
...|++..+.+.++|+|-.++.+.
T Consensus 180 ~~~~pv~vLv~~~T~SaaE~~a~~l 204 (291)
T d1k32a4 180 SVRGKIIAITNEYAGSDGDIFSFSF 204 (291)
T ss_dssp CBCSEEEEEECTTCCTHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCccchHHHHHH
Confidence 124799999999999998888744
No 42
>d1gqoa_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Bacillus subtilis [TaxId: 1423]}
Probab=40.30 E-value=14 Score=25.86 Aligned_cols=49 Identities=16% Similarity=0.232 Sum_probs=36.1
Q ss_pred HHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccc
Q 028125 46 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF 99 (213)
Q Consensus 46 ~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~ 99 (213)
..+++.|... .+..++|.| -|||....+.+|.|+|+..+.|++-+=...
T Consensus 54 gelI~~I~~~--~~~~dgiIi---NPga~thtS~al~Dal~~~~~P~iEVHlSN 102 (141)
T d1gqoa_ 54 GDLIDAIHEA--EEQYSGIVL---NPGALSHYSYAIRDAVSSISLPVVEVHLSN 102 (141)
T ss_dssp HHHHHHHHHH--TTTCSEEEE---ECGGGGGTCHHHHHHHHTSCSCEEEEESSC
T ss_pred HHHHHHHHHh--hhccceeee---cchhhhhhhhhHHHHHHhcCCCEEEEEeCC
Confidence 3466666542 344566654 499999999999999999999987765444
No 43
>d2c4va1 c.23.13.1 (A:1-158) Type II 3-dehydroquinate dehydratase {Helicobacter pylori [TaxId: 210]}
Probab=36.55 E-value=20 Score=25.53 Aligned_cols=49 Identities=22% Similarity=0.272 Sum_probs=33.5
Q ss_pred HHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEcc
Q 028125 46 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVG 98 (213)
Q Consensus 46 ~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G 98 (213)
..+++.|..... .+.++| .|| |||....+.+|.|+|+..+.|++=+=..
T Consensus 56 gelId~I~~a~~-~~~dgi--IIN-Pga~ThtS~al~DAl~~~~~P~iEVHlS 104 (158)
T d2c4va1 56 GEIIDKIQESVG-SDYEGI--IIN-PGAFSHTSIAIADAIMLAGKPVIEVHLT 104 (158)
T ss_dssp HHHHHHHHHTTS-TTEEEE--EEE-CGGGGGTCHHHHHHHHHSSSCEEEEESS
T ss_pred HHHHHHHHHHhC-CCcceE--Eec-chhheeeeeehHHHHHhcCCCEEEEEcc
Confidence 346666653321 122333 344 9999999999999999999998776543
No 44
>d1j7xa_ c.14.1.2 (A:) Interphotoreceptor retinoid-binding protein IRBP {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=36.04 E-value=21 Score=27.85 Aligned_cols=51 Identities=12% Similarity=-0.006 Sum_probs=39.6
Q ss_pred CCCCceEEEE-eCCCCChhHHHHHHHHHHh---------------------------------cCCCeEEEEccccchHH
Q 028125 59 DDSKRVYMYI-NGPGGDVTPTLAIYDTMQS---------------------------------LKSPVGTHCVGFAYHLA 104 (213)
Q Consensus 59 ~~~~~I~l~I-NSpGG~v~~~~~I~~~i~~---------------------------------~~~~v~t~~~G~aaSaa 104 (213)
.+.+.++|-+ +.+||++..+..|...+-. ...||++.+.+.++|+|
T Consensus 138 ~~t~~LIiDLR~N~GG~~~~~~~i~s~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~~~kpv~VLt~~~T~Saa 217 (302)
T d1j7xa_ 138 TITENLIIDLRYNVGGSSTAVPLLLSYFLDPETKIHLFTLHNRQQNSTDEVYSHPKVLGKPYGSKKGVYVLTSHQTATAA 217 (302)
T ss_dssp TTCSEEEEECTTCCCBCSTTHHHHHHTTSCSSCCCEEEEEEETTTTCCEEEECCSCCSSCCCCSSSEEEEEECTTCCTHH
T ss_pred cccceEEEEcCcCCCCCHHHHHHHHHHhcCCCceEEEEEEccCccccceEEeccccccCCCcccCCCEEEEECCCCCCch
Confidence 3578888888 7789999888888866631 12468899999999999
Q ss_pred HHHHh
Q 028125 105 GFLLA 109 (213)
Q Consensus 105 ~~I~~ 109 (213)
-.++.
T Consensus 218 E~fa~ 222 (302)
T d1j7xa_ 218 EEFAY 222 (302)
T ss_dssp HHHHH
T ss_pred hhhhh
Confidence 77766
No 45
>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=34.61 E-value=50 Score=21.95 Aligned_cols=11 Identities=0% Similarity=0.030 Sum_probs=4.1
Q ss_pred eEEEEeCCCCC
Q 028125 64 VYMYINGPGGD 74 (213)
Q Consensus 64 I~l~INSpGG~ 74 (213)
|.|---+.+|.
T Consensus 61 iiigspt~~~~ 71 (148)
T d1vmea1 61 LIFGVSTYEAE 71 (148)
T ss_dssp EEEEECEETTE
T ss_pred eEEEecccCCc
Confidence 33333333343
No 46
>d1uqra_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Actinobacillus pleuropneumoniae [TaxId: 715]}
Probab=32.60 E-value=32 Score=24.06 Aligned_cols=49 Identities=14% Similarity=0.236 Sum_probs=35.4
Q ss_pred HHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccc
Q 028125 46 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF 99 (213)
Q Consensus 46 ~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~ 99 (213)
..+++.+.... ++.++|.+ | |||..-.+.+|.|+|+..+.|++-+=...
T Consensus 55 geli~~i~~a~--~~~dgiIi--N-pga~ThtS~al~Dal~~~~~P~iEVHlSN 103 (146)
T d1uqra_ 55 ESLINRIHQAF--QNTDFIII--N-PGAFTHTSVAIRDALLAVSIPFIEVHLSN 103 (146)
T ss_dssp HHHHHHHHHTT--TTCCEEEE--E-CTTHHHHCHHHHHHHHHHTCCEEEEESSC
T ss_pred HHHHHHHHHHh--cCcceeEe--c-ccceeeehhhHHHHHHHcCCCEEEEEccC
Confidence 44666666432 23555444 3 99999999999999999999988765544
No 47
>d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=29.62 E-value=49 Score=22.31 Aligned_cols=73 Identities=23% Similarity=0.332 Sum_probs=38.4
Q ss_pred CCCeeeeecCCCCCCchhhhHHhhccC--cEEEEc----c----ccCc-chHH-HHHHHHHhhccCCCCCceEEEEeCCC
Q 028125 5 GTPKVLYRTPGEGSWQWVDLWNALYRE--RVIFIG----Q----NIDE-EFSN-QILATMLYLDSVDDSKRVYMYINGPG 72 (213)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~iI~i~----G----~I~~-~~~~-~l~~~l~~l~~~~~~~~I~l~INSpG 72 (213)
|-|.|..---+...+.|..+...|-+. +++.+. | +-+. .... ...+.+..++.....+.+.+.-+|-|
T Consensus 2 G~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvghS~G 81 (258)
T d1xkla_ 2 GKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSLG 81 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETTH
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhcccccccccccccchh
Confidence 556666533333446788888887654 566552 2 1121 1122 22222222333344557777778998
Q ss_pred CChhH
Q 028125 73 GDVTP 77 (213)
Q Consensus 73 G~v~~ 77 (213)
|.+..
T Consensus 82 g~va~ 86 (258)
T d1xkla_ 82 GMNLG 86 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87653
No 48
>d1euca2 c.23.4.1 (A:131-306) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=29.28 E-value=58 Score=22.86 Aligned_cols=54 Identities=9% Similarity=0.045 Sum_probs=36.3
Q ss_pred HHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhc--CCCeEEEEccccc
Q 028125 48 ILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSL--KSPVGTHCVGFAY 101 (213)
Q Consensus 48 l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~--~~~v~t~~~G~aa 101 (213)
+.+-|.++..++..+.|.+++.+-+-.-........+-+.. .+||+++..|..+
T Consensus 66 ~~d~l~~~~~d~~t~~i~~~~E~~~~~~~~~~~~~~a~~~~~~~kPvv~~k~grs~ 121 (176)
T d1euca2 66 FTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVSFIAGLTA 121 (176)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEESSSSHHHHHHHHHHHHSSSSSCCCEEEEEECTTC
T ss_pred HHHHHHHHHhhccCcccceEEEeeccchhhhHHHHHHHHhccCCCceEEEeccccc
Confidence 34455666677888999999998775555555555544433 4799998876654
No 49
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]}
Probab=28.57 E-value=24 Score=25.11 Aligned_cols=35 Identities=20% Similarity=0.447 Sum_probs=22.0
Q ss_pred CCceEEEEeCCC-CChhHHHH------HHHHHHh---cCCCeEEEEccc
Q 028125 61 SKRVYMYINGPG-GDVTPTLA------IYDTMQS---LKSPVGTHCVGF 99 (213)
Q Consensus 61 ~~~I~l~INSpG-G~v~~~~~------I~~~i~~---~~~~v~t~~~G~ 99 (213)
.+.|.| || |+..++.. +.+.|++ .+.|+..+|.|+
T Consensus 43 ~D~lIl----PG~G~f~~~~~~l~~~~~~~~i~~~~~~~~PiLGIClG~ 87 (200)
T d1k9vf_ 43 YDLLFI----PGVGHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGM 87 (200)
T ss_dssp CSEEEE----CCCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHH
T ss_pred cCeEEE----cChHHHHHHHHhhhcccccccccccccccceEEEEecce
Confidence 455555 99 87665532 2234443 368999888776
No 50
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.47 E-value=49 Score=19.89 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHH-hCCCHHHHHHHhcCCceeCHHHHHH
Q 028125 150 VRDYIFKELSRK-TGQPFEKITKDLSRIKRFGSQEALE 186 (213)
Q Consensus 150 ~~~~~~~~~a~~-tg~~~~~i~~~~~~~~~~sa~EA~~ 186 (213)
+.+...+.+|.. .|++++++++..+=..-+|++|=.+
T Consensus 31 Ll~l~c~~vA~~ikgkt~eeiR~~f~I~~D~t~eEe~~ 68 (70)
T d1nexa1 31 LLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAA 68 (70)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCCHHHHHT
T ss_pred HHHHHHHHHHHHHccCCHHHHHHHhCCCCCCCHHHHHh
Confidence 334455556655 4899999999997666688887443
No 51
>d2nu7b1 c.23.4.1 (B:239-388) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.59 E-value=94 Score=21.49 Aligned_cols=70 Identities=23% Similarity=0.198 Sum_probs=46.8
Q ss_pred EccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCCh---hHHHHHHHHHHhcC--CCeEEEEccccchHHHHHHhc
Q 028125 36 IGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDV---TPTLAIYDTMQSLK--SPVGTHCVGFAYHLAGFLLAG 110 (213)
Q Consensus 36 i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v---~~~~~I~~~i~~~~--~~v~t~~~G~aaSaa~~I~~a 110 (213)
+.|.-+ .+.+...++-+-++++.+.|.+ |--||-+ .-+..|.++++..+ .|+++...|.-+.-|-=|+.-
T Consensus 51 iGG~a~---~e~v~~al~lil~d~~vk~IlI--NifGGI~rcd~vA~GIv~A~k~~~~~iPiVVRl~Gtn~eeg~~iL~~ 125 (150)
T d2nu7b1 51 VGGGAT---KERVTEAFKIILSDDKVKAVLV--NIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLAD 125 (150)
T ss_dssp CCSCCC---HHHHHHHHHHHHTSTTCCEEEE--EEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEEESTTHHHHHHHHHH
T ss_pred cCCCcc---HHHHHHHHHHHHcCCCCCEEEE--EEeeeeehhHHHHHHHHHHHHhcCCCCcEEEEecCCCHHHHHHHHHH
Confidence 455433 3455555555555666775555 6668853 45667788888765 688988899988888777743
No 52
>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]}
Probab=25.77 E-value=63 Score=22.19 Aligned_cols=8 Identities=25% Similarity=0.189 Sum_probs=4.4
Q ss_pred cEEEEccc
Q 028125 32 RVIFIGQN 39 (213)
Q Consensus 32 ~iI~i~G~ 39 (213)
.||++.|-
T Consensus 21 ~vv~lHG~ 28 (271)
T d1va4a_ 21 PVLFSHGW 28 (271)
T ss_dssp EEEEECCT
T ss_pred eEEEECCC
Confidence 45666553
No 53
>d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]}
Probab=25.76 E-value=92 Score=21.05 Aligned_cols=78 Identities=9% Similarity=0.067 Sum_probs=39.8
Q ss_pred eecCCCCC--CchhhhHHhhccCcEEEEccccCcchHHHHHHHHHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhc
Q 028125 11 YRTPGEGS--WQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSL 88 (213)
Q Consensus 11 ~~~~~~~~--~~~~~~~~~~~~~~iI~i~G~I~~~~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~ 88 (213)
+..||-.. +.|..+...|-.-+++.+.-.=-++.++.+++.|..+ ...+++.|.=+|-||.+. ..+...+...
T Consensus 21 ~~lhg~~g~~~~~~~la~~L~~~~v~~~~~~g~~~~a~~~~~~i~~~---~~~~~~~lvGhS~GG~vA--~~~A~~~~~~ 95 (230)
T d1jmkc_ 21 FAFPPVLGYGLMYQNLSSRLPSYKLCAFDFIEEEDRLDRYADLIQKL---QPEGPLTLFGYSAGCSLA--FEAAKKLEGQ 95 (230)
T ss_dssp EEECCTTCCGGGGHHHHHHCTTEEEEEECCCCSTTHHHHHHHHHHHH---CCSSCEEEEEETHHHHHH--HHHHHHHHHT
T ss_pred EEEcCCCCCHHHHHHHHHHCCCCEEeccCcCCHHHHHHHHHHHHHHh---CCCCcEEEEeeccChHHH--HHHHHhhhhh
Confidence 34444333 5577776666432233322211234566666666543 234567777788888764 3334444444
Q ss_pred CCCeE
Q 028125 89 KSPVG 93 (213)
Q Consensus 89 ~~~v~ 93 (213)
...+.
T Consensus 96 ~~~v~ 100 (230)
T d1jmkc_ 96 GRIVQ 100 (230)
T ss_dssp TCCEE
T ss_pred Cccce
Confidence 44443
No 54
>d2icta1 a.35.1.3 (A:8-94) Antitoxin HigA {Escherichia coli [TaxId: 562]}
Probab=24.76 E-value=46 Score=20.51 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=23.0
Q ss_pred HHHHHHHhCCCHHHHHHHhcCCceeCHHHHHHc
Q 028125 155 FKELSRKTGQPFEKITKDLSRIKRFGSQEALEY 187 (213)
Q Consensus 155 ~~~~a~~tg~~~~~i~~~~~~~~~~sa~EA~~~ 187 (213)
..-+|+..|.+...+.++.+..+..|++-|+.+
T Consensus 17 q~~LA~~lGvs~~~is~ie~g~~~~s~~~~~kl 49 (87)
T d2icta1 17 LREFARAMEIAPSTASRLLTGKAALTPEMAIKL 49 (87)
T ss_dssp HHHHHHHHTCCHHHHHHHHHTSSCCCHHHHHHH
T ss_pred HHHHHHHHhhcHHHHHHHHHhccCCCHHHHHHH
Confidence 455677778887777777776677777766543
No 55
>d2nu7a2 c.23.4.1 (A:122-287) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.85 E-value=1.1e+02 Score=21.09 Aligned_cols=50 Identities=14% Similarity=0.118 Sum_probs=29.9
Q ss_pred HHhhccCCCCCceEEEEeCCCCChhHHHHHHHHHHhcCCCeEEEEccccchH
Q 028125 52 MLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHL 103 (213)
Q Consensus 52 l~~l~~~~~~~~I~l~INSpGG~v~~~~~I~~~i~~~~~~v~t~~~G~aaSa 103 (213)
+++++.++..+.|.+++... +.-..-.......+ .++||+++..|..+.+
T Consensus 70 ~~~~~dd~~t~vi~~~~e~~-~~~~~~~~~~~~~~-~~KPvV~~k~Grs~~g 119 (166)
T d2nu7a2 70 LEMFEKDPQTEAIVMIGEIG-GSAEEEAAAYIKEH-VTKPVVGYIAGVTAPK 119 (166)
T ss_dssp HHHHHTCTTCCEEEEEEESS-SSHHHHHHHHHHHH-CCSCEEEEEECTTCCT
T ss_pred HHhhccCCccEEEEEEEecc-cchhhHHHHHHHHh-cCCCeEEEeCCcCCcc
Confidence 33444555566777776664 44333344444443 4799999998886543
No 56
>d2nxoa1 c.94.1.1 (A:5-281) Hypothetical protein SCo4506 {Streptomyces coelicolor [TaxId: 1902]}
Probab=21.94 E-value=53 Score=24.15 Aligned_cols=38 Identities=13% Similarity=0.181 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCce-eCHHH
Q 028125 146 ELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR-FGSQE 183 (213)
Q Consensus 146 ~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~-~sa~E 183 (213)
++....+...+++++.++++++.+++.+..-+| ++.++
T Consensus 211 ~~~~~p~ea~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~ 249 (277)
T d2nxoa1 211 LSLEEVEKVAEQAARWEAFDEDTLAKYFTTLDFRFGAPQ 249 (277)
T ss_dssp HHHHTHHHHHHHHHTTSSSCHHHHHHHHHHSBCCCSHHH
T ss_pred HHHhCHHHHHHHHHHHcCCCHHHHHHHHHhCcCCCCHHH
Confidence 334444667788999999999998887643222 45543
No 57
>d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]}
Probab=21.22 E-value=75 Score=21.89 Aligned_cols=13 Identities=8% Similarity=0.077 Sum_probs=6.6
Q ss_pred HHHHHHHHHhcCC
Q 028125 78 TLAIYDTMQSLKS 90 (213)
Q Consensus 78 ~~~I~~~i~~~~~ 90 (213)
+..+.+.|+.++.
T Consensus 73 ~~~~~~~l~~l~~ 85 (273)
T d1a8sa_ 73 ADDLAQLIEHLDL 85 (273)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCc
Confidence 3445555555553
No 58
>d1un8a4 c.119.1.2 (A:1-335) Dihydroxyacetone kinase {Citrobacter freundii [TaxId: 546]}
Probab=20.59 E-value=36 Score=27.13 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=20.6
Q ss_pred hHHHHHHHHHhhccCCCCCceEEEEeCCCCChh
Q 028125 44 FSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 76 (213)
Q Consensus 44 ~~~~l~~~l~~l~~~~~~~~I~l~INSpGG~v~ 76 (213)
.++.+++.|.. .-+..+.+.+.||.-||.-.
T Consensus 236 iv~~l~~~l~~--~~~~gd~v~llVN~LG~ts~ 266 (335)
T d1un8a4 236 VVNLMVDKLLA--ALPETGRLAVMINNLGGVSV 266 (335)
T ss_dssp HHHHHHHHHHH--HSCSSCCEEEEEEECBCSCH
T ss_pred HHHHHHHHHhh--ccCCCCeEEEEEcCCCCCcH
Confidence 34555555542 23456789999999999853
Done!