BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028131
(213 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 327 bits (839), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/217 (73%), Positives = 186/217 (85%), Gaps = 4/217 (1%)
Query: 1 MGCVLTKKTKQT----PGYEEPTVLAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEE 56
MGC ++KK K+ PGYE+P +LA+ TPFTV EVEALYELFKKLSSSI DDG+IHKEE
Sbjct: 1 MGCSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEE 60
Query: 57 FQLALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLY 116
FQLALFRN+N++NLFADRIFD+FD+KRNGVIEFGEFVRSLGVFHP A V +K+ FAF+LY
Sbjct: 61 FQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLY 120
Query: 117 DLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEF 176
DLRQTGFIEREELKEMV+ALLHES+L+LS+D+IE +VDK+F AD DGKID +EWK+F
Sbjct: 121 DLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDF 180
Query: 177 VKKNPSLIKNMTLPYLKDITLAFPSFVLSSEVEDSEM 213
V NPSLIKNMTLPYLKDI FPSFV S E E+ E+
Sbjct: 181 VSLNPSLIKNMTLPYLKDINRTFPSFVSSCEEEEMEL 217
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 322 bits (824), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 156/207 (75%), Positives = 180/207 (86%), Gaps = 4/207 (1%)
Query: 1 MGCVLTKKTKQT----PGYEEPTVLAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEE 56
MGC ++KK K+ PGYE+P +LA+ TPFTV EVEALYELFKKLSSSI DDG+IHKEE
Sbjct: 1 MGCSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEE 60
Query: 57 FQLALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLY 116
FQLALFRN+N++NLFADRIFD+FD+KRNGVIEFGEFVRSLGVFHP A V +K+ FAF+LY
Sbjct: 61 FQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLY 120
Query: 117 DLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEF 176
DLRQTGFIEREELKEMV+ALLHES+L+LS+D+IE +VDK+F AD DGKID +EWK+F
Sbjct: 121 DLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDF 180
Query: 177 VKKNPSLIKNMTLPYLKDITLAFPSFV 203
V NPSLIKNMTLPYLKDI FPSFV
Sbjct: 181 VSLNPSLIKNMTLPYLKDINRTFPSFV 207
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 266 bits (680), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 127/211 (60%), Positives = 166/211 (78%)
Query: 1 MGCVLTKKTKQTPGYEEPTVLAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQLA 60
+GC KQ+ G +P +LA +T F+V E+EALYELFKK+SS++ DDG+I+KEEFQLA
Sbjct: 16 LGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLA 75
Query: 61 LFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQ 120
LF+ K++LFADR+FDLFD K NG++ F EF R+L VFHP+A ++DKI F+F+LYDL+Q
Sbjct: 76 LFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQ 135
Query: 121 TGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKN 180
GFIER+E+K+MV+A L ES + L D VIE I+DK+F +ADT DGKID EEW+ V ++
Sbjct: 136 QGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRH 195
Query: 181 PSLIKNMTLPYLKDITLAFPSFVLSSEVEDS 211
PSL+KNMTL YLKDIT FPSFV S+VED+
Sbjct: 196 PSLLKNMTLQYLKDITTTFPSFVFHSQVEDT 226
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 250 bits (638), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 153/188 (81%)
Query: 17 EPTVLAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQLALFRNKNKKNLFADRIF 76
+P +LA +T F+V E+EALYELFKK+SS++ DDG+I+KEEFQLALF+ K++LFADR+F
Sbjct: 1 DPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF 60
Query: 77 DLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLAL 136
DLFD K NG++ F EF R+L VFHP+A ++DKI F+F+LYDL+Q GFIER+E+K+MV+A
Sbjct: 61 DLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT 120
Query: 137 LHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTLPYLKDIT 196
L ES + L D VIE I+DK+F +ADT DGKID EEW+ V ++PSL+KNMTL YLKDIT
Sbjct: 121 LAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYLKDIT 180
Query: 197 LAFPSFVL 204
FPSFV
Sbjct: 181 TTFPSFVF 188
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 96/174 (55%), Gaps = 9/174 (5%)
Query: 21 LAAETPFTVCEVEALYELF-KKLSSSIFDDGIIHKEEFQLALFRNKNKKNLFADRIFDLF 79
L +T FT EV+ Y+ F K S D K Q F + K FA +F++F
Sbjct: 16 LTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTK---FATFVFNVF 72
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALL-- 137
D ++G IEF EF+++L V +++K+ +AF+LYDL G+I R E+ ++V A+
Sbjct: 73 DENKDGRIEFSEFIQALSV-TSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQM 131
Query: 138 --HESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTL 189
+ +L ++ E VD+ F+ D N DGK+ +E++E K +PS+++ ++L
Sbjct: 132 VGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSL 185
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 14 GYEEPTVLAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQLALFRNKNKKNLFAD 73
G E L + F E++ L + FKKL + + G + EEF + + ++N
Sbjct: 2 GNEASYPLEMCSHFDADEIKRLGKRFKKLD--LDNSGSLSVEEF---MSLPELQQNPLVQ 56
Query: 74 RIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMV 133
R+ D+FD NG ++F EF+ + F E K+ FAFR+YD+ + G+I EL +++
Sbjct: 57 RVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 116
Query: 134 LALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
++ + L D ++ IVDK+ +AD +GDG+I EE+
Sbjct: 117 KMMVGNN---LKDTQLQQIVDKTIINADKDGDGRISFEEF 153
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 14 GYEEPTVLAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQLALFRNKNKKNLFAD 73
G E L + F E++ L + FKKL + + G + EEF + + ++N
Sbjct: 1 GNEASYPLEMCSHFDADEIKRLGKRFKKLD--LDNSGSLSVEEF---MSLPELQQNPLVQ 55
Query: 74 RIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMV 133
R+ D+FD NG ++F EF+ + F E K+ FAFR+YD+ + G+I EL +++
Sbjct: 56 RVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 115
Query: 134 LALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
++ + L D ++ IVDK+ +AD +GDG+I EE+
Sbjct: 116 KMMVGNN---LKDTQLQQIVDKTIINADKDGDGRISFEEF 152
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFDL 78
L T F E++ Y+ F K S G ++K EFQ F + FA+ +F++
Sbjct: 16 LVRSTRFDKKELQQWYKGFFKDCPS----GHLNKSEFQKIYKQFFPFGDPSAFAEYVFNV 71
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLH 138
FD +NG I+F EF+ +L V + DK+ +AF+LYDL G I +E+ +V A+
Sbjct: 72 FDADKNGYIDFKEFICALSV-TSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYK 130
Query: 139 ESDLILS----DDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTL 189
++ +D E V+K F+ D N DG++ EE+ E K++P+++ ++L
Sbjct: 131 MVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALSL 185
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 20 VLAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFD 77
+L A++ FT E++ LY FK S G++++E F+ + F + +A +F+
Sbjct: 54 LLEAQSKFTKKELQILYRGFKNECPS----GVVNEETFKEIYSQFFPQGDSTTYAHFLFN 109
Query: 78 LFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALL 137
FD NG + F +F++ L + V++K+ +AF LYD+ + G+I +EE+ +++ A+
Sbjct: 110 AFDTDHNGAVSFEDFIKGLSIL-LRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIY 168
Query: 138 HE----SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTL 189
+ +L +D V+ F D N DG + +E+ E +K+ +++++M L
Sbjct: 169 DMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQL 224
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 83/143 (58%), Gaps = 8/143 (5%)
Query: 31 EVEALYELFKKLSSSIFDDGIIHKEEFQLALFRNKNKKNLFADRIFDLFDLKRNGVIEFG 90
E++ L + FKKL + + G + EEF ++L + ++N R+ D+FD NG ++F
Sbjct: 5 EIKRLGKRFKKLD--LDNSGSLSVEEF-MSL--PELQQNPLVQRVIDIFDTDGNGEVDFK 59
Query: 91 EFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIE 150
EF+ + F E K+ FAFR+YD+ + G+I EL +++ ++ + L D ++
Sbjct: 60 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNN---LKDTQLQ 116
Query: 151 TIVDKSFSDADTNGDGKIDPEEW 173
IVDK+ +AD +GDG+I EE+
Sbjct: 117 QIVDKTIINADKDGDGRISFEEF 139
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 11/175 (6%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFDL 78
L A+T FT E++ LY FK S G++++E F+ A F + +A +F+
Sbjct: 42 LEAQTNFTKRELQVLYRGFKNECPS----GVVNEETFKQIYAQFFPHGDASTYAHYLFNA 97
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALL- 137
FD + G ++F +FV +L + V +K+ + F LYD+ + G+I +EE+ ++V A+
Sbjct: 98 FDTTQTGSVKFEDFVTALSIL-LRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYD 156
Query: 138 ---HESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTL 189
+ +L +D VD F D N DG + +E+ E +++ ++++++ L
Sbjct: 157 MMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 211
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Query: 31 EVEALYELFKKLSSSIFDDGIIHKEEFQLALFRNKNKKNLFADRIFDLFDLKRNGVIEFG 90
E++ L + FKKL + + G + EEF + + ++N R+ D+FD NG ++F
Sbjct: 4 EIKRLGKRFKKLD--LDNSGSLSVEEF---MSLPELQQNPLVQRVIDIFDTDGNGEVDFK 58
Query: 91 EFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIE 150
EF+ + F E K+ FAFR+YD+ + G+I EL +++ ++ + L D ++
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNN---LKDTQLQ 115
Query: 151 TIVDKSFSDADTNGDGKIDPEEW 173
IVDK+ +AD +GDG+I EE+
Sbjct: 116 QIVDKTIINADKDGDGRISFEEF 138
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 93/175 (53%), Gaps = 11/175 (6%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFDL 78
L A+T FT E++ LY FK S G+++++ F+ A F + +A +F+
Sbjct: 6 LEAQTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTYAHYLFNA 61
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLH 138
FD + G ++F +FV +L + V +K+ + F LYD+ + G+I +EE+ ++V A+
Sbjct: 62 FDTTQTGSVKFEDFVTALSIL-LRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYD 120
Query: 139 ESDL----ILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTL 189
+L++D VD F D N DG + +E+ E +++ ++++++ L
Sbjct: 121 MMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 175
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 11/175 (6%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFDL 78
L A+T FT E++ LY FK S G++++E F+ A F + +A +F+
Sbjct: 9 LEAQTNFTKRELQVLYRGFKNEXPS----GVVNEETFKQIYAQFFPHGDASTYAHYLFNA 64
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALL- 137
FD + G ++F +FV +L + V +K+ + F LYD+ + G+I +EE+ ++V A+
Sbjct: 65 FDTTQTGSVKFEDFVTALSIL-LRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYD 123
Query: 138 ---HESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTL 189
+ +L +D VD F D N DG + +E+ E +++ ++++++ L
Sbjct: 124 MMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDDNIMRSLQL 178
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 93/175 (53%), Gaps = 11/175 (6%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFDL 78
L A+T FT E++ LY FK S G+++++ F+ A F + +A +F+
Sbjct: 6 LEAQTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTYAHYLFNA 61
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALL- 137
FD + G ++F +FV +L + V +K+ + F LYD+ + G+I +EE+ ++V A+
Sbjct: 62 FDTTQTGSVKFEDFVTALSIL-LRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYD 120
Query: 138 ---HESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTL 189
+ +L +D VD F D N DG + +E+ E +++ ++++++ L
Sbjct: 121 MMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 175
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFDL 78
L T FT E++ Y+ F + S G + EEF+ F + FA+ +F
Sbjct: 16 LLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYGNFFPYGDASKFAEHVFRT 71
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLH 138
FD +G I+F EF+ +L V +E K+ +AF +YDL G+I + E+ E+V A+
Sbjct: 72 FDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYK 130
Query: 139 ESDLILS----DDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIK 185
++ + E +K F DTN DGK+ EE+ K +PS+++
Sbjct: 131 MVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVR 181
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQL--ALFRNKNKKNLFADRIFDL 78
L A+T FT E+++LY FK + G++ ++ F+L + F + +A +F+
Sbjct: 82 LQAQTKFTKKELQSLYRGFKNECPT----GLVDEDTFKLIYSQFFPQGDATTYAHFLFNA 137
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREE----LKEMVL 134
FD NG I F +FV L + V +K+ +AF LYD+ + G I +EE +K +
Sbjct: 138 FDADGNGAIHFEDFVVGLSIL-LRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYD 196
Query: 135 ALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTL 189
+ + IL +D V++ F D N DG + +E+ E +K+ +++ +M L
Sbjct: 197 MMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQL 251
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 71 FADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
FA+ +F +FD NG I F EF+ L +E+K+++AF LYDL G+I +E+
Sbjct: 64 FANHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLNHDGYITFDEML 122
Query: 131 EMVLAL--LHESDLILSDD--VIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKN 186
+V ++ + S + L++D E V K F D N DG I +E++E K +PS+I
Sbjct: 123 TIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGA 182
Query: 187 MTL 189
+ L
Sbjct: 183 LNL 185
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 42/208 (20%)
Query: 16 EEPTVLAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ----LALFRNKNKKNLF 71
EE + ET F+ ++ LY F L ++G + +E+FQ LA+ N
Sbjct: 12 EELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAI-------NPL 62
Query: 72 ADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVED------------------KIAFAF 113
DRI + F + + F F+R+L F P +ED K+ FAF
Sbjct: 63 GDRIINAFFSEGEDQVNFRGFMRTLAHFRP---IEDNEKSKDVNGPEPLNSRSNKLHFAF 119
Query: 114 RLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
RLYDL + I R+EL +++ ++ + +SD+ + +I D++ +AD +GD I +
Sbjct: 120 RLYDLDKDDKISRDELLQVLRMMV---GVNISDEQLGSIADRTIQEADQDGDSAI---SF 173
Query: 174 KEFVK--KNPSLIKNMTLPYLKDITLAF 199
EFVK + + + M++ +L + A
Sbjct: 174 TEFVKVLEKVDVEQKMSIRFLHKLAAAL 201
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 40/185 (21%)
Query: 16 EEPTVLAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ----LALFRNKNKKNLF 71
EE + ET F+ ++ LY F L ++G + +E+FQ LA+ N
Sbjct: 12 EELEEIKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAI-------NPL 62
Query: 72 ADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVED------------------KIAFAF 113
DRI + F + + F F+R+L F P +ED K+ FAF
Sbjct: 63 GDRIINAFFPEGEDQVNFRGFMRTLAHFRP---IEDNEKSKDVNGPEPLNSRSNKLHFAF 119
Query: 114 RLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
RLYDL + I R+EL +++ ++ + +SD+ + +I D++ +AD +GD I +
Sbjct: 120 RLYDLDKDEKISRDELLQVLRMMV---GVNISDEQLGSIADRTIQEADQDGDSAI---SF 173
Query: 174 KEFVK 178
EFVK
Sbjct: 174 TEFVK 178
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Query: 69 NLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREE 128
N + +++F+ FD ++G I+F E+V +L + V+ K+ + F+LYD+ G I+R E
Sbjct: 51 NKYVEQMFETFDFNKDGYIDFMEYVAALSLV-LKGKVDQKLRWYFKLYDVDGNGCIDRGE 109
Query: 129 LKEMVLAL--LHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKN 186
L ++ A+ ++ + ++ + +V F D NGDG++ EE+ E V+K+ L+
Sbjct: 110 LLNIIKAIRAINRCNEAMTAEEFTNMV---FDKIDINGDGELSLEEFMEGVQKDEVLLDI 166
Query: 187 MT 188
+T
Sbjct: 167 LT 168
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 67 KKNLFADRIFDLFDLK-RNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIE 125
K N F +RI +F + F +F+ L VF A + K +AFR++D G +
Sbjct: 57 KANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLN 116
Query: 126 REELKEMVLALLHES-DLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNP 181
RE+L +V L E D LS ++ ++D ++D + DG I+ E++ + ++P
Sbjct: 117 REDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSP 173
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 67 KKNLFADRIFDLFDLK-RNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIE 125
K N F +RI +F + F +F+ L VF A + K +AFR++D G +
Sbjct: 88 KANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLN 147
Query: 126 REELKEMVLALLHES-DLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNP 181
RE+L +V L E D LS ++ ++D ++D + DG I+ E++ + ++P
Sbjct: 148 REDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSP 204
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 52 IHKEEFQLALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAF 111
+H+ + L L K N D++++ FD ++G ++F EF+ ++ + + E K+ +
Sbjct: 39 LHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKM-EQKLKW 97
Query: 112 AFRLYDLRQTGFIEREELKEMVLAL--LHESDLILSDDVIETIVDKSFSDADTNGDGKID 169
F+LYD G I++ EL +M +A+ L+ + ++ I + F D N DG++
Sbjct: 98 YFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLV----FHKIDINNDGELT 153
Query: 170 PEEWKEFVKKNPSLI 184
EE+ + K+ L+
Sbjct: 154 LEEFINGMAKDQDLL 168
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 13/108 (12%)
Query: 75 IFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
+ D D +G ++F EF VRS+ E++++ FR++D G+I+ +ELK
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKD-DSKGKSEEELSDLFRMFDKNADGYIDLDELK 118
Query: 131 EMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
M+ A + I DD+ E + D D N DG+ID +EW EF+K
Sbjct: 119 IMLQAT---GETITEDDIEELM-----KDGDKNNDGRIDYDEWLEFMK 158
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFDL 78
L T FT E+ + Y+ F K S G I ++EFQ + F + +A +F
Sbjct: 16 LQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALL 137
FD +G ++F E+V +L + K+ +AF LYD+ G I + E+ E+V A+
Sbjct: 72 FDANSDGTLDFKEYVIALHMTSA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFDL 78
L T FT E+ + Y+ F K S G I ++EFQ + F + +A +F
Sbjct: 16 LQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALL 137
FD +G ++F E+V +L + K+ +AF LYD+ G I + E+ E+V A+
Sbjct: 72 FDANSDGTLDFKEYVIALHMTSA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFDL 78
L T FT E+ + Y+ F K S G I ++EFQ + F + +A +F
Sbjct: 16 LQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALL 137
FD +G ++F E+V +L + K+ +AF LYD+ G I + E+ E+V A+
Sbjct: 72 FDANSDGTLDFKEYVIALHMTSA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFDL 78
L T FT E+ + Y+ F K S G I ++EFQ + F + +A +F
Sbjct: 17 LQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVFRS 72
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALL 137
FD +G ++F E+V +L + K+ +AF LYD+ G I + E+ E+V A+
Sbjct: 73 FDANSDGTLDFKEYVIALHMTSA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF 130
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 38/168 (22%)
Query: 24 ETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ----LALFRNKNKKNLFADRIFDLF 79
ET F+ + L+ F+ L + G + + + Q LA+ N DRI + F
Sbjct: 20 ETGFSQASLLRLHHRFRALDRN--KKGYLSRMDLQQIGALAV-------NPLGDRIIESF 70
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVED-------------------KIAFAFRLYDLRQ 120
+ ++F FVR L F P VED K+ +AF+LYDL +
Sbjct: 71 FPDGSQRVDFPGFVRVLAHFRP---VEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDR 127
Query: 121 TGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKI 168
G I R E+ +++ ++ + ++++ +E I D++ +AD +GDG +
Sbjct: 128 DGKISRHEMLQVLRLMV---GVQVTEEQLENIADRTVQEADEDGDGAV 172
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFDL 78
L T FT E+ + Y+ F K S G I ++EFQ + F + +A +F
Sbjct: 16 LQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALL 137
FD +G ++F ++V +L + K+ +AF LYD+ G I + E+ E+V A+
Sbjct: 72 FDANSDGTLDFKQYVIALHMTSA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFDL 78
L T FT E+ + Y+ F K S G I ++EFQ + F + +A +F
Sbjct: 16 LQLNTKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALL 137
FD +G ++F ++V +L + K+ +AF LYD+ G I + E+ E+V A+
Sbjct: 72 FDANSDGTLDFKQYVIALHMTSA-GKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 13/108 (12%)
Query: 75 IFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
+ D D +G ++F EF VRS+ E++++ FR++D G+I+ EELK
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKD-DSKGKTEEELSDLFRMFDKNADGYIDLEELK 118
Query: 131 EMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
M+ A + I DD+ E + D D N DG+ID +E+ EF+K
Sbjct: 119 IMLQAT---GETITEDDIEELM-----KDGDKNNDGRIDYDEFLEFMK 158
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 71 FADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
+ + +F FD + I+F E+V +L + L E K+ + F++YD + G I+R+EL
Sbjct: 60 YVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTL-EHKLKWTFKIYDKDRNGCIDRQELL 118
Query: 131 EMVLALLH---------ESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNP 181
++V ++ E++ E +VD+ F D NGDG++ E+ E +++
Sbjct: 119 DIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDK 178
Query: 182 SLIKNMTLPYLKDITLAFPSFVLSSEVEDSEM 213
++K + + D+ PS +S + S M
Sbjct: 179 WVMKMLQM----DLN---PSSWISQQRRKSAM 203
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 13/108 (12%)
Query: 75 IFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
+ D D +G ++F EF VRS+ E++++ FR++D G+I+ EELK
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKD-DSKGKSEEELSDLFRMFDKNADGYIDLEELK 118
Query: 131 EMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
M+ A + I DD+ E + D D N DG+ID +E+ EF+K
Sbjct: 119 IMLQAT---GETITEDDIEELM-----KDGDKNNDGRIDYDEFLEFMK 158
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 16/133 (12%)
Query: 49 DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALV 105
DG I EE +L +N ++ L D I ++ D NG IEF EF+ +
Sbjct: 24 DGCITVEELATVIRSLDQNPTEEEL-QDMISEV-DADGNGTIEFDEFLSLMAKKVKDTDA 81
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E+++ AF+++D Q G+I EL+ +++ L + L+D+ +E ++ +AD +GD
Sbjct: 82 EEELKEAFKVFDKDQNGYISASELRHVMINLGEK----LTDEEVEQMI----KEADLDGD 133
Query: 166 GKIDPEEWKEFVK 178
G+++ ++EFVK
Sbjct: 134 GQVN---YEEFVK 143
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHE 139
D NG I+F EF+ + E+++ AFR++D Q GFI EL+ ++
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN---- 112
Query: 140 SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
L + + + VD+ +AD +GDG+I+ ++EFVK
Sbjct: 113 ----LGEKLTDEEVDEMIREADVDGDGQIN---YEEFVK 144
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHE 139
D NG I+F EF+ + E+++ AFR++D Q GFI EL+ ++
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN---- 112
Query: 140 SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
L + + + VD+ +AD +GDG+I+ + EFVK
Sbjct: 113 ----LGEKLTDEEVDEMIREADVDGDGQIN---YDEFVK 144
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 75 IFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
+ D D +G ++F EF VR + E++++ FR++D G+I+ EELK
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRCMKD-DSKGKTEEELSDLFRMFDKNADGYIDLEELK 118
Query: 131 EMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
M+ A + I DD+ E + D D N DG+ID +E+ EF+K
Sbjct: 119 IMLQAT---GETITEDDIEELM-----KDGDKNNDGRIDYDEFLEFMK 158
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 105 VEDKIAFAFRLYDLRQTGFIEREE----LKEMVLALLHESDLILSDDVIETIVDKSFSDA 160
V +K+ +AF LYD+ + G+I +EE +K + + + IL +D V++ F
Sbjct: 7 VHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKM 66
Query: 161 DTNGDGKIDPEEWKEFVKKNPSLIKNMTL 189
D N DG + EE+ E +K+ +++ +M L
Sbjct: 67 DRNQDGVVTIEEFLEACQKDENIMSSMQL 95
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 13/108 (12%)
Query: 75 IFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
+ D D +G ++F EF VRS+ E++++ FR++D G+I+ +ELK
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKD-DSKGKSEEELSDLFRMWDKNADGYIDLDELK 118
Query: 131 EMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
M+ A + I DD+ E + D D N DG+ID +E+ EF+K
Sbjct: 119 IMLQAT---GETITEDDIEELM-----KDGDKNNDGRIDYDEFLEFMK 158
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 86/174 (49%), Gaps = 29/174 (16%)
Query: 28 TVCEVEALYELFKKLSSSIFDDGIIHKEEF-----QLALFRNKNKKNLFA---------- 72
T+ E + L E+F+KL ++ +DG++ ++E + + + +L
Sbjct: 326 TLDETKQLTEIFRKLDTN--NDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQI 383
Query: 73 DRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEM 132
D + L D+ +G IE+ EF+ S + L +++ AF+++D +G I +EL
Sbjct: 384 DSLMPLLDMDGSGSIEYSEFIAS-AIDRTILLSRERMERAFKMFDKDGSGKISTKEL--- 439
Query: 133 VLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKN 186
L ++D + + +E+I+++ D N DG++D + EFV+ + ++N
Sbjct: 440 -FKLFSQADSSIQMEELESIIEQ----VDNNKDGEVD---FNEFVEMLQNFVRN 485
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 45 SIFD---DGIIHKEEFQLALFR-NKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFH 100
S+FD DG I +E + +N + + D NG I+F EF+ + +
Sbjct: 318 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWM 377
Query: 101 PHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA 160
E++I AFR++D G+I EL+ ++ L + + + VD+ +A
Sbjct: 378 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN--------LGEKLTDEEVDEMIREA 429
Query: 161 DTNGDGKIDPEEWKEFV 177
D +GDG+++ EE+ + +
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 75 IFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
+ D D +G ++F EF VRS+ E++++ FR++D G+I+ +ELK
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKD-DSKGKSEEELSDLFRMFDKNADGYIDLDELK 118
Query: 131 EMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
M+ A + I DD+ E + D D N DG+ID +E EF+K
Sbjct: 119 IMLQAT---GETITEDDIEELM-----KDGDKNNDGRIDYDEXLEFMK 158
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 61 LFRNKNKKNLFADRIFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLY 116
L +N K+ L D I + D +G I+F EF VR + E+++A FR++
Sbjct: 49 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIF 105
Query: 117 DLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
D GFI+ EEL E++ A + VIE ++ D+D N DG+ID +E+
Sbjct: 106 DKNADGFIDIEELGEILRA--------TGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 154
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 75 IFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
+ D D +G ++F EF VRS+ E++++ FR+ D G+I+ +ELK
Sbjct: 60 MIDEVDEDGSGTVDFDEFLVMMVRSMKD-DSKGKSEEELSDLFRMXDKNADGYIDLDELK 118
Query: 131 EMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
M+ A + I DD+ E + D D N DG+ID +E+ EF+K
Sbjct: 119 IMLQAT---GETITEDDIEELM-----KDGDKNNDGRIDYDEFLEFMK 158
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 45 SIFD---DGIIHKEEFQLALFR-NKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFH 100
S+FD DG I +E + +N + + D NG I+F EF+ +
Sbjct: 318 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKM 377
Query: 101 PHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA 160
+ E++I AFR++D G+I EL+ ++ L + + + VD+ +A
Sbjct: 378 KYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN--------LGEKLTDEEVDEMIREA 429
Query: 161 DTNGDGKIDPEEWKEFV 177
D +GDG+++ EE+ + +
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHE 139
D NG I+F EF+ + E+K+ AFR++D GFI EL+ ++
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTN---- 111
Query: 140 SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
L + + + VD+ +AD +GDG+++ EE+
Sbjct: 112 ----LGEKLTDEEVDEMIREADVDGDGQVNYEEF 141
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 73 DRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEM 132
D++ D D +NG IE+ EFV ++ + L +++ AFR++D +G I EL
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL--- 440
Query: 133 VLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
+ + DV S+ D N DG++D +E+++ + K
Sbjct: 441 -------ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 480
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 73 DRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEM 132
D++ D D +NG IE+ EFV ++ + L +++ AFR++D +G I EL
Sbjct: 408 DQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL--- 463
Query: 133 VLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
+ + DV S+ D N DG++D +E+++ + K
Sbjct: 464 -------ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 503
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 73 DRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEM 132
D++ D D +NG IE+ EFV ++ + L +++ AFR++D +G I EL
Sbjct: 409 DQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL--- 464
Query: 133 VLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
+ + DV S+ D N DG++D +E+++ + K
Sbjct: 465 -------ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 504
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L D I ++ D NG I+F EF+ +
Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEV-DADGNGTIDFPEFLTMMAR 75
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D GFI EL+ ++ L + L+D+ VD+
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK----LTDEE----VDEMIR 127
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 128 EADIDGDGQVNYEEF 142
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L D I ++ D NG I+F EF+ +
Sbjct: 17 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEV-DADGNGTIDFPEFLTMMAR 74
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D GFI EL+ ++ L + L+D+ VD+
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK----LTDEE----VDEMIR 126
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 127 EADIDGDGQVNYEEF 141
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L D I ++ D NG I+F EF+ +
Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEV-DADGNGTIDFPEFLTMMAR 75
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D GFI EL+ ++ L + L+D+ VD+
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK----LTDEE----VDEMIR 127
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 128 EADIDGDGQVNYEEF 142
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 17 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 74
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D GFI EL+ ++ L + L+D+ VD+
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK----LTDEE----VDEMIR 126
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 127 EADIDGDGQVNYEEF 141
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHE 139
D NG ++F EF+ + E++I AFR++D GF+ EL+ V+ L E
Sbjct: 56 DRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRH-VMTRLGE 114
Query: 140 SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
LSD+ VD+ ADT+GDG+++ EE+
Sbjct: 115 K---LSDEE----VDEMIRAADTDGDGQVNYEEF 141
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 2 GCVLTKKTKQTPGYEEPTVLAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQLAL 61
G V+ KKTK G+E PT T + E + + LF K DG I +E +
Sbjct: 279 GAVMQKKTK---GWE-PT-RDQLTEEQIAEFKEAFSLFDKDG-----DGTITTKELGTVM 328
Query: 62 FR-NKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQ 120
+N + + D +G I+F EF+ + E++I AFR++D
Sbjct: 329 RSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDG 388
Query: 121 TGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFV 177
G+I EL+ ++ L + + + VD+ +AD +GDG+++ EE+ + +
Sbjct: 389 NGYISAAELRHVMTNL--------GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 437
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 23 AETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQL---ALFRNKNKKNLFADRIFDLF 79
A T + E + + LF K DG I +E +L +N + L + +
Sbjct: 1 AATEEQIAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAEL--QDMINEV 53
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHE 139
D NG I+F EF+ + E++I AFR++D G+I EL+ ++ L +
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 113
Query: 140 SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
L+D+ VD+ +AD +GDG+++ EE+
Sbjct: 114 ----LTDEE----VDEMIREADIDGDGQVNYEEF 139
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 21 LAAETPFTVCEVEALYELFKKLSSSIFDDGIIHKEEFQ--LALFRNKNKKNLFADRIFDL 78
L T F+ E+ + Y+ F K + G I +++FQ A F +A +F
Sbjct: 24 LQLNTKFSEEELCSWYQSFLKDCPT----GRITQQQFQSIYAKFFPDTDPKAYAQHVFRS 79
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALL 137
FD +G ++F E+V +L K+ +AF LYD+ G I + E+ E+V A+
Sbjct: 80 FDSNLDGTLDFKEYVIALHX-TTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXAIF 137
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDQMIR 127
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 128 EADIDGDGQVNYEEF 142
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 45 SIFD---DGIIHKEEFQLALFR-NKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFH 100
S+FD DG I +E + +N + + D NG I+F EF+ +
Sbjct: 284 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKM 343
Query: 101 PHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA 160
E++I AFR++D G+I EL+ ++ L + + + VD+ +A
Sbjct: 344 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREA 395
Query: 161 DTNGDGKIDPEEWKEFV 177
D +GDG+++ EE+ + +
Sbjct: 396 DIDGDGQVNYEEFVQMM 412
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 45 SIFD---DGIIHKEEFQLALFR-NKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFH 100
S+FD DG I +E + +N + + D NG I+F EF+ +
Sbjct: 319 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKM 378
Query: 101 PHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA 160
E++I AFR++D G+I EL+ ++ L + + + VD+ +A
Sbjct: 379 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREA 430
Query: 161 DTNGDGKIDPEEWKEFV 177
D +GDG+++ EE+ + +
Sbjct: 431 DIDGDGQVNYEEFVQMM 447
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 45 SIFD---DGIIHKEEFQLALFR-NKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFH 100
S+FD DG I +E + +N + + D NG I+F EF+ +
Sbjct: 281 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKM 340
Query: 101 PHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA 160
E++I AFR++D G+I EL+ ++ L + + + VD+ +A
Sbjct: 341 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREA 392
Query: 161 DTNGDGKIDPEEWKEFV 177
D +GDG+++ EE+ + +
Sbjct: 393 DIDGDGQVNYEEFVQMM 409
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 45 SIFD---DGIIHKEEFQLALFR-NKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFH 100
S+FD DG I +E + +N + + D NG I+F EF+ +
Sbjct: 284 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKM 343
Query: 101 PHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA 160
E++I AFR++D G+I EL+ ++ L + + + VD+ +A
Sbjct: 344 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREA 395
Query: 161 DTNGDGKIDPEEWKEFV 177
D +GDG+++ EE+ + +
Sbjct: 396 DIDGDGQVNYEEFVQMM 412
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 45 SIFD---DGIIHKEEFQLALFR-NKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFH 100
S+FD DG I +E + +N + + D NG I+F EF+ +
Sbjct: 318 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKM 377
Query: 101 PHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA 160
E++I AFR++D G+I EL+ ++ L + + + VD+ +A
Sbjct: 378 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREA 429
Query: 161 DTNGDGKIDPEEWKEFV 177
D +GDG+++ EE+ + +
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 61 LFRNKNKKNLFADRIFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLY 116
L +N K+ L D I + D +G I+F EF VR + E+++A FR++
Sbjct: 49 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIF 105
Query: 117 DLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
D GFI+ EEL E++ A + V E ++ D+D N DG+ID +E+
Sbjct: 106 DKNADGFIDIEELGEILRA--------TGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 45 SIFD---DGIIHKEEFQLALFR-NKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFH 100
S+FD DG I +E + +N + + D NG I+F EF+ +
Sbjct: 318 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKM 377
Query: 101 PHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA 160
E++I AFR++D G+I EL+ ++ L + + + VD+ +A
Sbjct: 378 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREA 429
Query: 161 DTNGDGKIDPEEWKEFV 177
D +GDG+++ EE+ + +
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 105 VEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNG 164
E++++ FR++D G+I+ EELK M+ A + I DD+ E + D D N
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQAT---GETITEDDIEELM-----KDGDKNN 64
Query: 165 DGKIDPEEWKEFVK 178
DG+ID +E+ EF+K
Sbjct: 65 DGRIDYDEFLEFMK 78
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 61 LFRNKNKKNLFADRIFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLY 116
L +N K+ L D I + D +G I+F EF VR + E+++A FR++
Sbjct: 46 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIF 102
Query: 117 DLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
D GFI+ EEL E++ A + V E ++ D+D N DG+ID +E+
Sbjct: 103 DKNADGFIDIEELGEILRA--------TGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 151
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 19 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 76
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 77 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 128
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 129 EADIDGDGQVNYEEF 143
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L D I ++ D NG I+F EF+ +
Sbjct: 15 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEV-DADGNGTIDFPEFLTMMAR 72
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 73 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 124
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 125 EADIDGDGQVNYEEF 139
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 127
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 128 EADIDGDGQVNYEEF 142
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 13 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 70
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 71 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 122
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 123 EADIDGDGQVNYEEF 137
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 21 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 78
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 79 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 130
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 131 EADIDGDGQVNYEEF 145
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 15 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 72
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 73 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 124
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 125 EADIDGDGQVNYEEF 139
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E++++ FR++D G+I+ EELK M+ A + I DD+ E + D D N D
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQAT---GETITEDDIEELM-----KDGDKNND 57
Query: 166 GKIDPEEWKEFVK 178
G+ID +E+ EF+K
Sbjct: 58 GRIDYDEFLEFMK 70
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 127
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 128 EADIDGDGQVNYEEF 142
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 127
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 128 EADIDGDGQVNYEEF 142
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 105 VEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNG 164
E++++ FR++D G+I+ EELK M+ A + I DD+ E + D D N
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQAT---GETITEDDIEELM-----KDGDKNN 59
Query: 165 DGKIDPEEWKEFVK 178
DG+ID +E+ EF+K
Sbjct: 60 DGRIDYDEFLEFMK 73
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E++++ FR++D G+I+ EELK M+ A + I DD+ E + D D N D
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQAT---GETITEDDIEELM-----KDGDKNND 55
Query: 166 GKIDPEEWKEFVK 178
G+ID +E+ EF+K
Sbjct: 56 GRIDYDEFLEFMK 68
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHE 139
D NG I+F EF+ + E+++ AFR++D GFI EL+ ++ L
Sbjct: 53 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNL--- 109
Query: 140 SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
+ + + VD+ +AD +GDG+++ EE+
Sbjct: 110 -----GEKLTDEEVDEMIREADVDGDGQVNYEEF 138
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 23 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 80
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 81 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 132
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 133 EADIDGDGQVNYEEF 147
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 17 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 74
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 126
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 127 EADIDGDGQVNYEEF 141
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 14 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 71
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 72 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 123
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 124 EADIDGDGQVNYEEF 138
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L D I ++ D NG I+F EF+ +
Sbjct: 16 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEV-DADGNGTIDFPEFLTMMAR 73
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 74 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 125
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 126 EADIDGDGQVNYEEF 140
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 17 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 74
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 126
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 127 EADIDGDGQVNYEEF 141
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 61 LFRNKNKKNLFADRIFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLY 116
L +N K+ L D I + D +G I+F EF VR + E+++A FR++
Sbjct: 49 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELADCFRIF 105
Query: 117 DLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
D GFI+ EEL E++ A + V E ++ D+D N DG+ID +E+
Sbjct: 106 DKNADGFIDIEELGEILRA--------TGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 75
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + + + VD+
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEXLTDEEVDEMIR 127
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 128 EADIDGDGQVNYEEF 142
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 17 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 74
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + + + VD+
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEXLTDEEVDEMIR 126
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 127 EADIDGDGQVNYEEF 141
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHE 139
D NG I+F EF+ + E+++ AFR++D GFI EL+ ++ L
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNL--- 112
Query: 140 SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
+ + + VD+ +AD +GDG+++ EE+
Sbjct: 113 -----GEKLTDEEVDEMIREADVDGDGQVNYEEF 141
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L D I ++ D NG I+F EF+ +
Sbjct: 18 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEV-DADGNGTIDFPEFLTMMAR 75
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D GFI EL+ ++ L + L+D+ VD+
Sbjct: 76 KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK----LTDEE----VDEMIR 127
Query: 159 DADTNGDGKIDPEEW 173
++D +GDG+++ EE+
Sbjct: 128 ESDIDGDGQVNYEEF 142
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 45 SIFD---DGIIHKEEFQLALFR-NKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFH 100
S+FD DG I +E + +N + + D +G I+F EF+ +
Sbjct: 317 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKM 376
Query: 101 PHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA 160
+ E++I AFR++D G+I EL+ ++ L + + + VD+ +A
Sbjct: 377 KYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN--------LGEKLTDEEVDEMIREA 428
Query: 161 DTNGDGKIDPEEWKEFV 177
D +GDG+++ EE+ + +
Sbjct: 429 DIDGDGQVNYEEFVQMM 445
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHE 139
D NG I+F EF+ + E++I AFR++D G+I EL+ ++ L +
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK 116
Query: 140 SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
L+D+ VD+ +AD +GDG+++ EE+
Sbjct: 117 ----LTDEE----VDEMIREADIDGDGQVNYEEF 142
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 45 SIFD---DGIIHKEEFQLALFR-NKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFH 100
S+FD DG I +E + +N + + D +G I+F EF+ +
Sbjct: 317 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKM 376
Query: 101 PHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA 160
+ E++I AFR++D G+I EL+ ++ L + + + VD+ +A
Sbjct: 377 KYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN--------LGEKLTDEEVDEMIREA 428
Query: 161 DTNGDGKIDPEEWKEFV 177
D +GDG+++ EE+ + +
Sbjct: 429 DIDGDGQVNYEEFVQMM 445
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 45 SIFD---DGIIHKEEFQLALFR-NKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFH 100
S+FD DG I +E + +N + + D +G I+F EF+ +
Sbjct: 318 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKM 377
Query: 101 PHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA 160
+ E++I AFR++D G+I EL+ ++ L + + + VD+ +A
Sbjct: 378 KYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN--------LGEKLTDEEVDEMIREA 429
Query: 161 DTNGDGKIDPEEWKEFV 177
D +GDG+++ EE+ + +
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHE 139
D NG I F EF+ E++I AFR++D G+I EL+ + L +
Sbjct: 56 DADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK 115
Query: 140 SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
L+D+ VD+ +AD +GDG+++ EE+
Sbjct: 116 ----LTDEE----VDEXIREADIDGDGQVNYEEF 141
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 73 DRIFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREE 128
D I + D +G I+F EF VR + E+++A FR++D G+I+ EE
Sbjct: 56 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELAECFRIFDRNADGYIDAEE 114
Query: 129 LKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
L E+ A S ++D+ IE+++ D D N DG+ID +E+
Sbjct: 115 LAEIFRA----SGEHVTDEEIESLM----KDGDKNNDGRIDFDEF 151
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L D I ++ D NG I+F EF+
Sbjct: 18 SLFDKDGDGTITTKELGTVXRSLGQNPTEAEL-QDXINEV-DADGNGTIDFPEFLTXXAR 75
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ + L + L+D+ VD+
Sbjct: 76 KXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK----LTDEE----VDQXIR 127
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 128 EADIDGDGQVNYEEF 142
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L D I ++ D NG I+F EF+
Sbjct: 17 SLFDKDGDGTITTKELGTVXRSLGQNPTEAEL-QDXINEV-DADGNGTIDFPEFLTXXAR 74
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ + L + L+D+ VD+
Sbjct: 75 KXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK----LTDEE----VDEXIR 126
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 127 EADIDGDGQVNYEEF 141
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E++++ FR++D G+I+ +ELK M+ A + I DD+ E + D D N D
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQAT---GETITEDDIEELM-----KDGDKNND 56
Query: 166 GKIDPEEWKEFVK 178
G+ID +E+ EF+K
Sbjct: 57 GRIDYDEFLEFMK 69
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 28 TVCEVEALYELFKKLSSSIFDDGIIHKEEFQLALFRNKNKKNLFA---------DRIFDL 78
T+ E + L ++FKKL + DG + K+E +N KN D I
Sbjct: 350 TLEERKELTDIFKKLDKN--GDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKE 407
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLH 138
D +NG IE+ EF+ S+ + E+++ AF L+D ++G I +EEL
Sbjct: 408 VDFDKNGYIEYSEFI-SVCMDKQILFSEERLRRAFNLFDTDKSGKITKEEL--------- 457
Query: 139 ESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
++L + E + +AD N D ID +E+ + K
Sbjct: 458 -ANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHK 497
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 73 DRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEM 132
D I D RNG I++ EFV ++ + L +DK+ AF+ +D G I +EL
Sbjct: 110 DAILGAADFDRNGYIDYSEFV-TVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELAS- 167
Query: 133 VLALLHESDLILSDDVIETIVDKSF-SDADTNGDGKIDPEEWKEFVKK 179
V L H +E+ K S D+N DG +D EE+ + ++K
Sbjct: 168 VFGLDH----------LESKTWKEMISGIDSNNDGDVDFEEFCKMIQK 205
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 24/157 (15%)
Query: 31 EVEALYELFKKLSSSIFDDGIIHKEEFQLAL----FRNKNK--KNLFADRIFDLFDLKRN 84
E+ ++LF S G I +E ++A+ F K + K + AD D +
Sbjct: 9 EIREAFDLFDTDGS-----GTIDAKELKVAMRALGFEPKKEEIKKMIAD-----IDKDGS 58
Query: 85 GVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLIL 144
G I+F EF++ + ++I AFRL+D +TG I + LK + L +
Sbjct: 59 GTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGEN----M 114
Query: 145 SDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNP 181
+D+ ++ ++D +AD +GDG+++ EE+ +KK
Sbjct: 115 TDEELQEMID----EADRDGDGEVNEEEFFRIMKKTS 147
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 29 VCEVEALYELFKKLSSSIFDDGIIHKEEFQLAL--FRNKNKKNLFADRIFDLFDLKRNGV 86
V E + +ELF + G I KE Q L F + + F + +F+ D NG
Sbjct: 5 VSEFKEAFELFDSERT-----GFITKEGLQTVLKQFGVRVEPAAF-NEMFNEADATGNGK 58
Query: 87 IEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLAL 136
I+F EF+ +G ED + AFR +D TG+I + L++ +L L
Sbjct: 59 IQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNL 108
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 112 AFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPE 171
AF L+D +TGFI +E L+ ++ V ++ F++AD G+GKI
Sbjct: 11 AFELFDSERTGFITKEGLQTVLKQF--------GVRVEPAAFNEMFNEADATGNGKI--- 59
Query: 172 EWKEFVKKNPSLIKNMT 188
++ EF+ +K T
Sbjct: 60 QFPEFLSMMGRRMKQTT 76
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 50 GIIHKEEFQLALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKI 109
G I KE+ + L ++ K D + D D +G I++ EF+ + L + I
Sbjct: 67 GYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIAA--ALDRKQLSKKLI 124
Query: 110 AFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKID 169
AFR++D+ G I EL ++ + ++ D V + D D N DGKID
Sbjct: 125 YCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRD---VNRVKRMIRDVDKNNDGKID 181
Query: 170 PEEWKEFVK 178
E+ E +K
Sbjct: 182 FHEFSEMMK 190
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 73 DRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEM 132
D++ D D +NG IE+ EFV ++ L +++ AFR +D +G I EL
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFV-TVAXDRKTLLSRERLERAFRXFDSDNSGKISSTEL--- 440
Query: 133 VLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
+ + DV S+ D N DG++D +E+++ + K
Sbjct: 441 -------ATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXLLK 480
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 17 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 74
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
+ E++I AFR++D GFI EL+ ++ L + L+D+ VD+
Sbjct: 75 KMKDS--EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK----LTDEE----VDEMIR 124
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 125 EADIDGDGQVNYEEF 139
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 17 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 74
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 126
Query: 159 DADTNGDGKIDPEEW 173
+A+ +GDG+++ EE+
Sbjct: 127 EANIDGDGQVNYEEF 141
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 16/110 (14%)
Query: 73 DRIFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREE 128
D I + D +G I+F EF VR + E+++A FR++D G+I+ EE
Sbjct: 56 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELAELFRIFDRNADGYIDAEE 114
Query: 129 LKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
L E+ A S ++D+ IE+++ D D N DG+ID + EF+K
Sbjct: 115 LAEIFRA----SGEHVTDEEIESLM----KDGDKNNDGRID---FDEFLK 153
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 45 SIFD---DGIIHKEEFQLALFR-NKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFH 100
S+FD DG I +E + +N + + D +G I+F EF+ +
Sbjct: 317 SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKM 376
Query: 101 PHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA 160
E++I AFR++D G+I EL+ ++ L + + + VD+ +A
Sbjct: 377 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREA 428
Query: 161 DTNGDGKIDPEEWKEFV 177
D +GDG+++ EE+ + +
Sbjct: 429 DIDGDGQVNYEEFVQMM 445
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 73 DRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEM 132
D I D RNG I++ EFV ++ + L +DK+ AF+ +D G I +EL
Sbjct: 393 DAILGAADFDRNGYIDYSEFV-TVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELAS- 450
Query: 133 VLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
V L H L + ++ S D+N DG +D EE+ + ++K
Sbjct: 451 VFGLDH-----LESKTWKEMI----SGIDSNNDGDVDFEEFCKMIQK 488
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D +G I+F EF+ +
Sbjct: 17 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGDGTIDFPEFLTMMAR 74
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E++I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 75 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 126
Query: 159 DADTNGDGKIDPEEW 173
+AD +GDG+++ EE+
Sbjct: 127 EADIDGDGQVNYEEF 141
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 18/122 (14%)
Query: 61 LFRNKNKKNLFADRIFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLY 116
L +N K+ L D I + D +G I+F EF VR + E+++ FR++
Sbjct: 49 LGQNPTKEEL--DAIIEEVDEDGSGTIDFEEFLVMMVRQMKE-DAKGKSEEELEDCFRIF 105
Query: 117 DLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEF 176
D GFI+ EEL E++ A + V E ++ D+D N DG+ID + EF
Sbjct: 106 DKNADGFIDIEELGEILRA--------TGEHVTEEDIEDLMKDSDKNNDGRID---FDEF 154
Query: 177 VK 178
+K
Sbjct: 155 LK 156
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 113 FRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEE 172
FR+ D Q+GFIE +ELK L +L+ +T + + AD +GDGKI EE
Sbjct: 47 FRILDNDQSGFIEEDELK-YFLQRFESGARVLTASETKTFL----AAADHDGDGKIGAEE 101
Query: 173 WKEFVK 178
++E V+
Sbjct: 102 FQEMVQ 107
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E+++A FR++D GFI+ EEL E++ A + VIE ++ D+D N D
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRA--------TGEHVIEEDIEDLMKDSDKNND 60
Query: 166 GKIDPEEW 173
G+ID +E+
Sbjct: 61 GRIDFDEF 68
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 73 DRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEM 132
D I D RNG IE+ EFV ++ + L +++ AF+ +D +G I EEL
Sbjct: 364 DHILQSVDFDRNGYIEYSEFV-TVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEEL--- 419
Query: 133 VLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
L +V + + + D N DG++D EE+ E ++K
Sbjct: 420 -------GRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 459
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 24/158 (15%)
Query: 31 EVEALYELFKKLSSSIFDDGIIHKEEFQLALFRNKNKKNLFADRIFDLFD---LKRNGVI 87
E+ L ELFK + + + G I +E + L R ++ L I DL D + ++G I
Sbjct: 8 EIGGLKELFKMIDTD--NSGTITFDELKDGLKRVGSE--LMESEIKDLMDAADIDKSGTI 63
Query: 88 EFGEFVRSLGVFHPHAL-VEDKIAFAFRLYDLRQTGFIEREELKEMV--LALLHESDLIL 144
++GEF+ + H + L E+ + AF +D +G+I +E+++ L D I
Sbjct: 64 DYGEFIAA--TVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL----DDIH 117
Query: 145 SDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPS 182
DD+I+ I D + DG+ID E+ ++K
Sbjct: 118 IDDMIKEI--------DQDNDGQIDYGEFAAMMRKRKG 147
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHE 139
D NG I+F EF+ + E+++ AF+++D G I EL+ ++ L +
Sbjct: 56 DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK 115
Query: 140 SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
L+DD VD+ +AD +GDG I+ ++EFV+
Sbjct: 116 ----LTDDE----VDEMIREADIDGDGHIN---YEEFVR 143
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHE 139
D NG I+F EF+ + E+++ AF+++D G I EL+ ++ L +
Sbjct: 56 DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK 115
Query: 140 SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
L+DD VD+ +AD +GDG I+ ++EFV+
Sbjct: 116 ----LTDDE----VDEMIREADIDGDGHIN---YEEFVR 143
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 73 DRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEM 132
D I D RNG IE+ EFV ++ + L +++ AF+ +D +G I EEL
Sbjct: 90 DHILQSVDFDRNGYIEYSEFV-TVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGR- 147
Query: 133 VLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
L +V + + + D N DG++D EE+ E ++K
Sbjct: 148 ---------LFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 185
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 38 LFKKLSSSIFDDGIIHKEEFQLALFRNKNKKN-LFADRIFDLFDLKRNGVIEFGEFVRSL 96
LFK++ + DG + EE + + + + KN IF D NG I+ EF +
Sbjct: 5 LFKEID--VNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Query: 97 GVFHPHALVEDKIAFA--FRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVD 154
G L +DKI ++L D+ G + +EE+ IE + +
Sbjct: 63 GSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSF-----------FKKHGIEKVAE 111
Query: 155 KSFSDADTNGDGKIDPEEWKEF 176
+ AD NGDG I EE+ EF
Sbjct: 112 QVMK-ADANGDGYITLEEFLEF 132
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 157 FSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTLPYL 192
F + D NGDG + EE K FV K + IKN L L
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRA-IKNEQLLQL 40
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 38 LFKKLSSSIFDDGIIHKEEFQLALFRNKNKKN-LFADRIFDLFDLKRNGVIEFGEFVRSL 96
LFK++ + DG + EE + + + + KN IF D NG I+ EF +
Sbjct: 5 LFKEID--VNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Query: 97 GVFHPHALVEDKIAFA--FRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVD 154
G L +DKI ++L D+ G + +EE+ IE + +
Sbjct: 63 GSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSF-----------FKKHGIEKVAE 111
Query: 155 KSFSDADTNGDGKIDPEEWKEF 176
+ AD NGDG I EE+ EF
Sbjct: 112 QVMK-ADANGDGYITLEEFLEF 132
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 157 FSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTLPYL 192
F + D NGDG + EE K FV K + IKN L L
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRA-IKNEQLLQL 40
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSF-SDADTNGD 165
D+I F + D ++GFIE EEL+ L + S V+ + K+F + DT+GD
Sbjct: 42 DQIKKVFGILDQDKSGFIEEEELQ------LFLKNFSSSARVLTSAETKAFLAAGDTDGD 95
Query: 166 GKIDPEEWKEFVK 178
GKI EE++ VK
Sbjct: 96 GKIGVEEFQSLVK 108
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSF-SDADTNGD 165
D+I F + D ++GFIE EEL+ L + S V+ + K+F + DT+GD
Sbjct: 41 DQIKKVFGILDQDKSGFIEEEELQ------LFLKNFSSSARVLTSAETKAFLAAGDTDGD 94
Query: 166 GKIDPEEWKEFVK 178
GKI EE++ VK
Sbjct: 95 GKIGVEEFQSLVK 107
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 73 DRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEM 132
D + D D +G I++ EF+ + L + I AFR++D+ G I EL
Sbjct: 93 DLLLDQIDSDGSGNIDYTEFLAA--AIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAH- 149
Query: 133 VLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
VL ++ I DV + V K + D NGDGKID E+ E +K
Sbjct: 150 VLFNGNKRGNITERDVNQ--VKKMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E+++ AFR++D Q GFI EL+ ++ L + + + VD+ +AD +GD
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTN--------LGEKLTDEEVDEMIREADVDGD 54
Query: 166 GKIDPEEWKEFVK 178
G+I+ ++EFVK
Sbjct: 55 GQIN---YEEFVK 64
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 84 NGVIEFGEFVRSLGVFHPHALVE--DKIAF-----AFRLYDLRQTGFIEREELKEMVLAL 136
G ++F +FV +G P L E D I AFR +D G I EL+E + AL
Sbjct: 61 GGHVDFDDFVELMG---PKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRAL 117
Query: 137 LHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
L + D+ E I D D NGDG++D EE+ + +
Sbjct: 118 LGHQ--VGHRDIEEII-----RDVDLNGDGRVDFEEFVRMMSR 153
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 74 RIFDLFDLKRNGVIEFGEF----VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREEL 129
++ D FD NG I+F F R LG ++ ++ AFRLYD G+I + +
Sbjct: 54 QLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVM 113
Query: 130 KEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
+E +L E D LS + ++ ++D+ D +G G +D EE+
Sbjct: 114 RE----ILAELDETLSSEDLDAMIDE----IDADGSGTVDFEEF 149
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDG 166
D + AF + D ++GFIE +ELK + L L+D +T + D++GDG
Sbjct: 41 DDVKKAFAIIDQDKSGFIEEDELK-LFLQNFKADARALTDGETKTFLKA----GDSDGDG 95
Query: 167 KIDPEEWKEFVK 178
KI +EW VK
Sbjct: 96 KIGVDEWTALVK 107
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 11/79 (13%)
Query: 100 HPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSD 159
H E+++ AF+++D Q G+I EL+ +++ L + L+D+ +E ++ +
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEK----LTDEEVEQMI----KE 53
Query: 160 ADTNGDGKIDPEEWKEFVK 178
AD +GDG+++ E EFVK
Sbjct: 54 ADLDGDGQVNYE---EFVK 69
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 46/74 (62%), Gaps = 11/74 (14%)
Query: 105 VEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNG 164
E+++ AF+++D Q G+I EL+ +++ L + L+D+ +E ++ +AD +G
Sbjct: 2 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEK----LTDEEVEQMI----KEADLDG 53
Query: 165 DGKIDPEEWKEFVK 178
DG+++ ++EFVK
Sbjct: 54 DGQVN---YEEFVK 64
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 112 AFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPE 171
+R YD +GFIE EELK + LL +++ + D + D D+N DGK++
Sbjct: 108 TWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELT 167
Query: 172 E 172
E
Sbjct: 168 E 168
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 71 FADRIFDLFDLKRNGVIEFGEFVRSLGV-------FHPHALVEDKIAFAFRLYDLRQTGF 123
+ D + LFD +G +E E R L V F + + AF LYD G+
Sbjct: 148 YTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGY 207
Query: 124 IEREELKEMV 133
I+ EL ++
Sbjct: 208 IDENELDALL 217
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA-DTNGD 165
D I AF D ++GFIE +ELK + L + L+D ET K+F A D++GD
Sbjct: 42 DDIKKAFVFIDQDKSGFIEEDELK-LFLQVFKAGARALTD--AET---KAFLKAGDSDGD 95
Query: 166 GKIDPEEWKEFVK 178
G I EEW VK
Sbjct: 96 GAIGVEEWVALVK 108
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA-DTNGD 165
D I AF D ++GFIE +ELK + L + L+D ET K+F A D++GD
Sbjct: 41 DDIKKAFVFIDQDKSGFIEEDELK-LFLQVFKAGARALTD--AET---KAFLKAGDSDGD 94
Query: 166 GKIDPEEWKEFVK 178
G I EEW VK
Sbjct: 95 GAIGVEEWVALVK 107
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDA-DTNGD 165
D I AF + D ++GFIE +ELK + L + L+D ET K+F A D++GD
Sbjct: 42 DDIKKAFFVIDQDKSGFIEEDELK-LFLQVFSAGARALTD--AET---KAFLKAGDSDGD 95
Query: 166 GKIDPEEWKEFVK 178
G I +EW VK
Sbjct: 96 GAIGVDEWAALVK 108
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 38 LFKKLSSSIFDDGIIHKEEFQLALFRNKNKKN-LFADRIFDLFDLKRNGVIEFGEFVRSL 96
LFK+L ++ DG + EE + + + KN IF D+ NG I+ EF +
Sbjct: 5 LFKQLDAN--GDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFA 62
Query: 97 GVFHPHALVEDKIAFA--FRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVD 154
L ++K+ ++L D G + +EE+ +E V++ I+
Sbjct: 63 AAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEK-------VVDQIMK 115
Query: 155 KSFSDADTNGDGKIDPEEWKEF 176
AD NGDG I EE+ F
Sbjct: 116 -----ADANGDGYITLEEFLAF 132
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 157 FSDADTNGDGKIDPEEWKEFV-KKNPSLIKNMTLPYL 192
F D NGDG + EE K FV K P IKN L L
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRP--IKNEQLLQL 40
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHE 139
D + G + FG+F+ + +++I AF+L+D +TG I + LK + L
Sbjct: 52 DKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGEN 111
Query: 140 SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
L+D+ ++ ++D +AD +GDG++ +E+ +KK
Sbjct: 112 ----LTDEELQEMID----EADRDGDGEVSEQEFLRIMKK 143
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 84 NGVIEFGEFVRSLGVFHPHALVE--DKIAF-----AFRLYDLRQTGFIEREELKEMVLAL 136
G ++F +FV +G P L E D I AFR +D G I EL+E + L
Sbjct: 75 GGHVDFDDFVELMG---PKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL 131
Query: 137 LHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
L + D+ E I D D NGDG++D EE+ + +
Sbjct: 132 LGHQ--VGHRDIEEII-----RDVDLNGDGRVDFEEFVRMMSR 167
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 84 NGVIEFGEFVRSLGVFHPHALVE--DKIAF-----AFRLYDLRQTGFIEREELKEMVLAL 136
G ++F +FV +G P L E D I AFR +D G I EL+E + L
Sbjct: 61 GGHVDFDDFVELMG---PKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL 117
Query: 137 LHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
L + D+ E I D D NGDG++D EE+ + +
Sbjct: 118 LGHQ--VGHRDIEEII-----RDVDLNGDGRVDFEEFVRMMSR 153
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 45 SIFD---DGIIHKEEFQL---ALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGV 98
S+FD DG I +E +L +N + L + + D NG I+F EF+ +
Sbjct: 13 SLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTIDFPEFLTMMAR 70
Query: 99 FHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFS 158
E +I AFR++D G+I EL+ ++ L + L+D+ VD+
Sbjct: 71 KMKDTDSE-EIREAFRVFDKDGNGYISAAELRHVMTNLGEK----LTDEE----VDEMIR 121
Query: 159 DADTNGDGKIDPEEW 173
+A+ +GDG+++ EE+
Sbjct: 122 EANIDGDGQVNYEEF 136
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 58 QLALFRNKNKKNLFADRIFDLFDLKRNGVI---EFGEFVRSLGVFHPHALVEDKIAFAFR 114
Q+ L R L+ D +FD+ D +NG I E+ + +S G+ E+ FR
Sbjct: 103 QITLIR------LWGDALFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEE----TFR 152
Query: 115 LYDLRQTGFIEREELKEMVLALLHESD 141
+ D+ ++G ++ +E+ L + D
Sbjct: 153 VCDIDESGQLDVDEMTRQHLGFWYTMD 179
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 84 NGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLI 143
NG + F EF + E+++ AF+++D GFI EL+ +++ L
Sbjct: 60 NGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINL------- 112
Query: 144 LSDDVIETIVDKSFSDADTNGDGKIDPEEW 173
+ V + +D+ +AD +GDG I+ EE+
Sbjct: 113 -GEKVTDEEIDEMIREADFDGDGMINYEEF 141
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 87 IEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSD 146
+ FG+F+ + +++I AF+L+D +TG I + LK + L L+D
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGEN----LTD 56
Query: 147 DVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNP 181
+ ++ ++D +AD +GDG++ +E+ +KK
Sbjct: 57 EELQEMID----EADRDGDGEVSEQEFLRIMKKTS 87
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDG 166
D + AF + ++GFIE +ELK + L L+D +T + D++GDG
Sbjct: 41 DDVKKAFAIIAQDKSGFIEEDELK-LFLQNFKADARALTDGETKTFLKAG----DSDGDG 95
Query: 167 KIDPEEWKEFVK 178
KI +EW VK
Sbjct: 96 KIGVDEWTALVK 107
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 113 FRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEE 172
FR D Q+G+++ EELK L L++ ++++ + AD +GDGKI EE
Sbjct: 48 FRFIDNDQSGYLDEEELK-FFLQKFESGARELTESETKSLM----AAADNDGDGKIGAEE 102
Query: 173 WKEFV 177
++E V
Sbjct: 103 FQEMV 107
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E++I AFR++D G+I EL+ ++ L + + + VD+ +AD +GD
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREADIDGD 52
Query: 166 GKIDPEEW 173
G+++ EE+
Sbjct: 53 GQVNYEEF 60
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDG 166
D + AF + D ++GFIE +ELK + L L+D +T + D++GDG
Sbjct: 42 DDVKKAFAIIDQDKSGFIEEDELK-LFLQNFKADARALTDGETKTFLKA----GDSDGDG 96
Query: 167 KIDPEEWKEFVK 178
KI +E+ VK
Sbjct: 97 KIGVDEFTALVK 108
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 33.5 bits (75), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDG 166
D + AF + ++GFIE +ELK + L L+D +T + D++GDG
Sbjct: 41 DDVKKAFAIIAQDKSGFIEEDELK-LFLQNFKADARALTDGETKTFLKAG----DSDGDG 95
Query: 167 KIDPEEWKEFVK 178
KI ++W VK
Sbjct: 96 KIGVDDWTALVK 107
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 33.5 bits (75), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 113 FRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEE 172
FR D Q+G+++ +ELK L L++ ++++D AD +GDGKI +E
Sbjct: 47 FRFIDNDQSGYLDGDELK-YFLQKFQSDARELTESETKSLMDA----ADNDGDGKIGADE 101
Query: 173 WKEFV 177
++E V
Sbjct: 102 FQEMV 106
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E++I AFR++D G+I EL+ ++ L + + + VD+ +AD +GD
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREADIDGD 55
Query: 166 GKIDPEEW 173
G+++ EE+
Sbjct: 56 GQVNYEEF 63
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E++I AFR++D G+I EL+ ++ L + + + VD+ +AD +GD
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREADIDGD 55
Query: 166 GKIDPEEW 173
G+++ EE+
Sbjct: 56 GQVNYEEF 63
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E++I AFR++D G+I EL+ ++ L + + + VD+ +AD +GD
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREADIDGD 58
Query: 166 GKIDPEEW 173
G+++ EE+
Sbjct: 59 GQVNYEEF 66
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E++I AFR++D G+I EL+ ++ L + + + VD+ +AD +GD
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREADIDGD 59
Query: 166 GKIDPEEW 173
G+++ EE+
Sbjct: 60 GQVNYEEF 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E++I AFR++D G+I EL+ ++ L + + + VD+ +AD +GD
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREADIDGD 56
Query: 166 GKIDPEEW 173
G+++ EE+
Sbjct: 57 GQVNYEEF 64
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 70 LFADRIFDLFDLKRNGVI---EFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIER 126
++ D +FD+ D +NG I E+ + ++ G+ E+ FR+ D+ ++G ++
Sbjct: 109 IWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEE----TFRVCDIDESGQLDV 164
Query: 127 EELKEMVLALLHESD 141
+E+ L + D
Sbjct: 165 DEMTRQHLGFWYTMD 179
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHE 139
D + G FG+F+ +++I AF+L+D +TG I + LK + L
Sbjct: 77 DKEGTGKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGEN 136
Query: 140 SDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
L+D+ ++ +D +AD +GDG++ +E+ KK
Sbjct: 137 ----LTDEELQEXID----EADRDGDGEVSEQEFLRIXKK 168
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 84 NGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLI 143
+G I+F EF+ + ++I AFRL+D +G I ++L+ + L
Sbjct: 78 SGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKEL------- 130
Query: 144 LSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNP 181
+++ E + + ++AD N D +ID +E+ +KK
Sbjct: 131 -GENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 167
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 84 NGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLI 143
NG I+F +F+ + E++I AFR++ G+I +L+ ++ L
Sbjct: 361 NGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNL------- 413
Query: 144 LSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFV 177
+ + + VD+ +A +GDG+++ E++ + +
Sbjct: 414 -GEKLTDEEVDEMIREAGIDGDGQVNYEQFVQMM 446
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 113 FRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEE 172
F+ +D G I EL + + L S +D+V + ++ DT+GDG ID E
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGSTS----ADEV-----QRMMAEIDTDGDGFIDFNE 59
Query: 173 WKEFVKKNPSLIKNMT 188
+ F NP L+K++
Sbjct: 60 FISFCNANPGLMKDVA 75
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 113 FRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEE 172
F+ +D G I EL + + L S +D+V + ++ DT+GDG ID E
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGSTS----ADEV-----QRMMAEIDTDGDGFIDFNE 58
Query: 173 WKEFVKKNPSLIKNMT 188
+ F NP L+K++
Sbjct: 59 FISFCNANPGLMKDVA 74
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 70 LFADRIFDLFDLKRNGVI---EFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIER 126
++ D +FD+ D +NG I E+ + ++ G+ E+ FR+ D+ ++G ++
Sbjct: 109 IWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEE----TFRVCDIDESGQLDV 164
Query: 127 EELKEMVLALLHESD 141
+E L + D
Sbjct: 165 DEXTRQHLGFWYTXD 179
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 112 AFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPE 171
AFRLYD G+I + ++E +L E D LS + ++ ++D+ D +G G +D E
Sbjct: 8 AFRLYDKEGNGYISTDVMRE----ILAELDETLSSEDLDAMIDE----IDADGSGTVDFE 59
Query: 172 EW 173
E+
Sbjct: 60 EF 61
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSF-SDADTNGD 165
D + AF + D ++GFIE +ELK + L S L+D ET K+F +D D +GD
Sbjct: 41 DDVKKAFYVIDQDKSGFIEEDELK-LFLQNFSPSARALTD--AET---KAFLADGDKDGD 94
Query: 166 GKIDPEEWKEFVK 178
G I +E+ +K
Sbjct: 95 GMIGVDEFAAMIK 107
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 112 AFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPE 171
AFR +D G I EL+E + LL + D+ E I D D NGDG++D E
Sbjct: 12 AFREFDTNGDGEISTSELREAMRKLLGHQ--VGHRDIEEII-----RDVDLNGDGRVDFE 64
Query: 172 EWKEFVKK 179
E+ + +
Sbjct: 65 EFVRMMSR 72
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 23/151 (15%)
Query: 31 EVEALYELFKKLSSSIFDDGIIHKEEFQLALFRNKNKKNLFADRIFDLF---DLKRNGVI 87
E+ L E F + + G I EE + L R NL I DL D+ +G I
Sbjct: 25 EIAGLKEXFNXIDAD--KSGQITFEELKAGLKRVG--ANLKESEILDLXQAADVDNSGTI 80
Query: 88 EFGEFVRSLGVFHPHAL-VEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSD 146
++ EF+ + H + + ED + AF +D +G+I +EL++ + + D
Sbjct: 81 DYKEFIAA--TLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQAC------EEFGVED 132
Query: 147 DVIETIVDKSFSDADTNGDGKIDPEEWKEFV 177
IE + D D + DG+ID + EFV
Sbjct: 133 VRIEELX----RDVDQDNDGRID---YNEFV 156
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E++I AFR+ D G+I EL+ ++ L + + + VD+ +AD +GD
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNL--------GEKLTDEEVDEMIREADIDGD 79
Query: 166 GKIDPEEW 173
G+++ EE+
Sbjct: 80 GQVNYEEF 87
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 80 DLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLAL 136
D NG I+F EF+ + E++I AFR++D G+I EL+ ++ L
Sbjct: 11 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 67
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 113 FRLYDLRQTGFIEREELKEMVLAL-LHESDLILSDDVIETIVDKSFSDADTNGDGKIDPE 171
F + D Q+GFIE EELK ++ H DL +T + D++ DGKI +
Sbjct: 47 FEILDKDQSGFIEEEELKGVLKGFSAHGRDL------NDTETKALLAAGDSDHDGKIGAD 100
Query: 172 EWKEFV 177
E+ + V
Sbjct: 101 EFAKMV 106
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin
I N-Terminus
Length = 99
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 32 VEALYELFKKLSSSIFDDGIIHKEEF------QLALFRNKNKKNLFADRIFDLFDLKRNG 85
+E+L +F+K + ++ I K EF +LA F K DR+ DL +G
Sbjct: 12 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDG 71
Query: 86 VIEFGEFVRSLG 97
++F EF+ +G
Sbjct: 72 QLDFQEFLNLIG 83
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E++I AF+++D G I+ +E K ++ + E L ++ V+++ +AD +G+
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFK-FIMQKVGEEPLTDAE------VEEAMKEADEDGN 59
Query: 166 GKIDPEEWKEFVKKNPSLIK 185
G ID E+ + +KK+ + +K
Sbjct: 60 GVIDIPEFMDLIKKSKNALK 79
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E+++ AF+++D G I EL+ ++ L + L+DD VD+ +AD +GD
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK----LTDDE----VDEMIREADIDGD 58
Query: 166 GKIDPEEW 173
G I+ EE+
Sbjct: 59 GHINYEEF 66
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 105 VEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNG 164
+++I AF+L+D +TG I + LK + L L+D+ ++ ++D +AD +G
Sbjct: 9 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGEN----LTDEELQEMID----EADRDG 60
Query: 165 DGKIDPEEWKEFVKKNP 181
DG++ +E+ +KK
Sbjct: 61 DGEVSEQEFLRIMKKTS 77
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 113 FRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSF-SDADTNGDGKIDPE 171
F+ D +GFIE EELK VL L+D ET K+F AD +GDGKI +
Sbjct: 48 FKAIDADASGFIEEEELK-FVLKSFAADGRDLTD--AET---KAFLKAADKDGDGKIGID 101
Query: 172 EWKEFV 177
E++ V
Sbjct: 102 EFETLV 107
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 105 VEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNG 164
V+ ++ AF+ D G++ EL+ ++ L ++ LS D ++ K AD N
Sbjct: 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTL--DAYKALSKDKVKEASAKLIKMADKNS 62
Query: 165 DGKIDPEEWKEFVKKNPSLI 184
DGKI E EF+ N L+
Sbjct: 63 DGKISKE---EFLNANAELL 79
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 104 LVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTN 163
L E ++ AFR+ D + G I+ + L+ ++ +L E L++D IE ++ ++ DT+
Sbjct: 4 LDERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDE----LTEDEIENMI----AETDTD 55
Query: 164 GDGKIDPEEWK 174
G G +D EE+K
Sbjct: 56 GSGTVDYEEFK 66
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGD 165
E++I AFR++D G+I +L+ ++ L + + + VD+ +AD +GD
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNL--------GEKLTDEEVDEMIREADIDGD 57
Query: 166 GKIDPEEW 173
G+++ E++
Sbjct: 58 GQVNYEDF 65
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 71 FADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
+ D +FD+FD +G I E+ ++ G + ++ FR DL +G ++ +E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 131 EMVLALLHESD 141
L + D
Sbjct: 173 RQHLGFWYTLD 183
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 71 FADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
+ D +FD+FD +G I E+ ++ G + ++ FR DL +G ++ +E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 131 EMVLALLHESD 141
L + D
Sbjct: 173 RQHLGFWYTLD 183
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 15/80 (18%)
Query: 112 AFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPE 171
AF+ +D GFI EL+ VL+ L E LSD+ ++ I++ + D G+ K
Sbjct: 90 AFKTFDREGQGFISGAELRH-VLSGLGER---LSDEEVDEIINLTDLQEDLEGNVK---- 141
Query: 172 EWKEFVKKNPSLIKNMTLPY 191
++EFVK K MT PY
Sbjct: 142 -YEEFVK------KVMTGPY 154
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 32 VEALYELFKKLSSSIFDDGIIHKEEF------QLALFRNKNKKNLFADRIFDLFDLKRNG 85
+E+L +F+K + + K EF +LA F K DR+ DL +G
Sbjct: 10 IESLIAVFQKYAGKDGHSVTLSKTEFLSFMNTELAAFTKNQKDPGVLDRMMKKLDLNSDG 69
Query: 86 VIEFGEFVRSLG 97
++F EF+ +G
Sbjct: 70 QLDFQEFLNLIG 81
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 15/80 (18%)
Query: 112 AFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPE 171
AF+ +D GFI EL+ VL+ L E LSD+ ++ I++ + D G+ K
Sbjct: 89 AFKTFDREGQGFISGAELRH-VLSGLGER---LSDEEVDEIINLTDLQEDLEGNVK---- 140
Query: 172 EWKEFVKKNPSLIKNMTLPY 191
++EFVK K MT PY
Sbjct: 141 -YEEFVK------KVMTGPY 153
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 71 FADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
+ D +FD+FD +G I E+ ++ G + ++ FR DL +G ++ +E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 131 EMVLALLHESD 141
L + D
Sbjct: 173 RQHLGFWYTLD 183
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 113 FRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEE 172
F+ +D G I EL + + L V V + ++ DT+GDG I +E
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS---------VTPDEVRRMMAEIDTDGDGFISFDE 67
Query: 173 WKEFVKKNPSLIKNMT 188
+ +F + N L+K+++
Sbjct: 68 FTDFARANRGLVKDVS 83
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 113 FRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEE 172
F+ +D+ G I EELK + D+ + +I+ +D + D NGDG+ID E
Sbjct: 135 FKFFDIDGNGKISVEELKR----IFGRDDI--ENPLIDKAIDSLLQEVDLNGDGEIDFHE 188
Query: 173 W 173
+
Sbjct: 189 F 189
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDG 166
++I AF+++D GFI ++EL + +L + + + + +I+ + D +GDG
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRL--------DMDGDG 87
Query: 167 KIDPEEW 173
++D EE+
Sbjct: 88 QVDFEEF 94
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 15 YEEPTVLAAETPFTVCE--VEALYELFKKLSSSIFD---DGIIHKEEFQLALFRNKNKKN 69
Y P +L+ + P + E +E + E FK +FD +G I K+E A+ N
Sbjct: 16 YTVPNLLSEQRPVDIPEDELEEIREAFK-----VFDRDGNGFISKQELGTAMRSLGYMPN 70
Query: 70 -LFADRIFDLFDLKRNGVIEFGEFVRSLG 97
+ + I D+ +G ++F EFV LG
Sbjct: 71 EVELEVIIQRLDMDGDGQVDFEEFVTLLG 99
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 71 FADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
+ D +FD+FD +G I E+ ++ G + ++ FR DL +G ++ +E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDEMT 172
Query: 131 EMVLALLHESD 141
L + D
Sbjct: 173 RQHLGFWYTLD 183
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 157 FSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTLPYL 192
F + D NGDG + EE K FV K + IKN L L
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRA-IKNEQLLQL 40
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 71 FADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELK 130
+ D +FD+FD +G I E+ ++ G + ++ FR DL G ++ +E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMT 172
Query: 131 EMVLALLHESD 141
L + D
Sbjct: 173 RQHLGFWYTLD 183
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 16/111 (14%)
Query: 67 KKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIER 126
KK + A D FD K+ F + +G+ A D + F + D ++GFIE
Sbjct: 12 KKAIGAFTAADSFDHKK--------FFQMVGLKKKSA---DDVKKVFHILDKDKSGFIEE 60
Query: 127 EELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFV 177
+EL ++ ++ LS +T++ + D +GDGKI EE+ V
Sbjct: 61 DELGSILKGFSSDA-ADLSAKETKTLM----AAGDKDGDGKIGVEEFSTLV 106
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 19/136 (13%)
Query: 35 LYELFKKLSSSIFDDGIIHKEEFQLALFRNKNK--KNLFADRIFDLFDLKRNGVIEFGEF 92
L+ +F+++ G+I E Q AL + I +FD + + F EF
Sbjct: 28 LWNVFQRVDKD--RSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 85
Query: 93 VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETI 152
GV+ ++ FR YD +G I++ ELK+ + + LSD + +
Sbjct: 86 T---GVWKYITDWQN----VFRTYDRDNSGMIDKNELKQALSGFGYR----LSDQFHDIL 134
Query: 153 VDKSFSDADTNGDGKI 168
+ K D G G+I
Sbjct: 135 IRK----FDRQGRGQI 146
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLH 138
D+ N IEF EF+ + E ++ AF+++D G I ELK ++ ++
Sbjct: 56 IDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE 115
Query: 139 ESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPS 182
+ DD++ + D G G+I+ +++ + K S
Sbjct: 116 KLTDAEVDDMLREVSD---------GSGEINIQQFAALLSKGSS 150
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 112 AFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPE 171
AFR D G I+ EL++++L L D + S +V E + + S S GDG I+ E
Sbjct: 81 AFRALDKEGNGTIQEAELRQLLLNL---GDALTSSEVEELMKEVSVS-----GDGAINYE 132
Query: 172 EW 173
+
Sbjct: 133 SF 134
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 19/136 (13%)
Query: 35 LYELFKKLSSSIFDDGIIHKEEFQLALFRNKNK--KNLFADRIFDLFDLKRNGVIEFGEF 92
L+ +F+++ G+I E Q AL + I +FD + + F EF
Sbjct: 9 LWNVFQRVDKD--RSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 66
Query: 93 VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETI 152
GV+ ++ FR YD +G I++ ELK+ + + LSD + +
Sbjct: 67 T---GVWKYITDWQN----VFRTYDRDNSGMIDKNELKQALSGFGYR----LSDQFHDIL 115
Query: 153 VDKSFSDADTNGDGKI 168
+ K D G G+I
Sbjct: 116 IRK----FDRQGRGQI 127
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 150 ETIVDKSFSDADTNGDGKIDPEEWKEFV 177
+ +VDK D+NGDG+ D +E+ FV
Sbjct: 51 QEVVDKVMETLDSNGDGECDFQEFMAFV 78
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 106 EDKIAFAFRLYDLRQTGFIEREELKEMVLA 135
E+++A AFR++D G+I+ EEL E++ A
Sbjct: 4 EEELANAFRIFDKNADGYIDIEELGEILRA 33
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 72 ADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKE 131
A R+F+ FD ++G + EF F P+ ED + F F D+ G + +E
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKF-FEEIDVDGNGELNADEFTS 61
Query: 132 MVLALL 137
+ +L
Sbjct: 62 CIEKML 67
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 19/136 (13%)
Query: 35 LYELFKKLSSSIFDDGIIHKEEFQLALFRNKNK--KNLFADRIFDLFDLKRNGVIEFGEF 92
L+ +F+++ G+I E Q AL + I +FD + + F EF
Sbjct: 6 LWNVFQRVDKD--RSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 63
Query: 93 VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETI 152
GV+ ++ FR YD +G I++ ELK+ + + LSD + +
Sbjct: 64 T---GVWKYITDWQN----VFRTYDRDNSGMIDKNELKQALSGFGYR----LSDQFHDIL 112
Query: 153 VDKSFSDADTNGDGKI 168
+ K D G G+I
Sbjct: 113 IRK----FDRQGRGQI 124
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDG 166
D + F + D ++GFIE +EL ++ ++ LS +T++ + D +GDG
Sbjct: 41 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDA-RDLSAKETKTLM----AAGDKDGDG 95
Query: 167 KIDPEEWKEFV 177
KI EE+ V
Sbjct: 96 KIGVEEFSTLV 106
>pdb|2XU2|A Chain A, Crystal Structure Of The Hypothetical Protein Pa4511 From
Pseudomonas Aeruginosa
Length = 252
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 92 FVRSLGV----FHPH-ALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHES-DLILS 145
F RSLG PH AL D + L + R+ L MVLAL +L L+
Sbjct: 103 FCRSLGTQVAYVKPHGALYNDLVGDDELLRAVLDACAAYRKGLPLMVLALADNGRELELA 162
Query: 146 DDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKKNPSLIKNMTLPYLKDITLAFPSF 202
D+ ++ ++F+D DG++ P V +P I L + AFP +
Sbjct: 163 DEADVPLLFEAFADRAYLPDGRLAPRRLGGAVHHDPQRIIEQALAIAR--GEAFPDY 217
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 113 FRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEE 172
F+ +D G I EL E + L I D+V + ++ DT+GDG I +E
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGS----ITPDEVKHMM-----AEIDTDGDGFISFQE 65
Query: 173 WKEFVKKNPSLIKNMT 188
+ +F + N L+K++
Sbjct: 66 FTDFGRANRGLLKDVA 81
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 19/136 (13%)
Query: 35 LYELFKKLSSSIFDDGIIHKEEFQLALFRNKNK--KNLFADRIFDLFDLKRNGVIEFGEF 92
L+ +F+++ G+I E Q AL + I +FD + + F EF
Sbjct: 9 LWNVFQRVDKD--RSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 66
Query: 93 VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETI 152
GV+ ++ FR YD +G I++ ELK+ L + LSD + +
Sbjct: 67 T---GVWKYITDWQN----VFRTYDRDNSGMIDKNELKQA----LSGAGYRLSDQFHDIL 115
Query: 153 VDKSFSDADTNGDGKI 168
+ K D G G+I
Sbjct: 116 IRK----FDRQGRGQI 127
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 19/136 (13%)
Query: 35 LYELFKKLSSSIFDDGIIHKEEFQLALFRNKNK--KNLFADRIFDLFDLKRNGVIEFGEF 92
L+ +F+++ G+I E Q AL + I +FD + + F EF
Sbjct: 5 LWNVFQRVDKD--RSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 62
Query: 93 VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETI 152
GV+ ++ FR YD +G I++ ELK+ + + LSD + +
Sbjct: 63 T---GVWKYITDWQN----VFRTYDRDNSGMIDKNELKQALSGFGYR----LSDQFHDIL 111
Query: 153 VDKSFSDADTNGDGKI 168
+ K D G G+I
Sbjct: 112 IRK----FDRQGRGQI 123
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 19/136 (13%)
Query: 35 LYELFKKLSSSIFDDGIIHKEEFQLALFRNKNK--KNLFADRIFDLFDLKRNGVIEFGEF 92
L+ +F+++ G+I E Q AL + I +FD + + F EF
Sbjct: 27 LWNVFQRVDKD--RSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 84
Query: 93 VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETI 152
GV+ ++ FR YD +G I++ ELK+ + + LSD + +
Sbjct: 85 T---GVWKYITDWQN----VFRTYDRDNSGMIDKNELKQALSGFGYR----LSDQFHDIL 133
Query: 153 VDKSFSDADTNGDGKI 168
+ K D G G+I
Sbjct: 134 IRK----FDRQGRGQI 145
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 47/143 (32%)
Query: 75 IFDLFDL--KRNGVIE---FGEFVRSLG----------VFHPHALVEDKIAF-------- 111
+F+LFD R+G ++ G+ R LG V H + E + F
Sbjct: 14 VFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYE 73
Query: 112 ---------------AFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKS 156
AF+ +D GFI EL+ VL+ L E LSD+ ++ I++ +
Sbjct: 74 GLMDCEQGTFADYMEAFKTFDREGQGFISGAELRH-VLSGLGER---LSDEEVDEIINLT 129
Query: 157 FSDADTNGDGKIDPEEWKEFVKK 179
D G+ K ++EFVKK
Sbjct: 130 DLQEDLEGNVK-----YEEFVKK 147
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 75 IFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREE 128
++D D ++G + EF L P L +DK F D + G I R+E
Sbjct: 107 MYDCIDTDKDGYVSLPEFKAFLQAVGPD-LTDDKAITCFNTLDFNKNGQISRDE 159
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDG 166
D + F + D ++GFIE +EL ++ ++ LS +T++ + D +GDG
Sbjct: 5 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDA-RDLSAKETKTLM----AAGDKDGDG 59
Query: 167 KIDPEEWKEFV 177
KI EE+ V
Sbjct: 60 KIGVEEFSTLV 70
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98 VFHPHALVEDKIAFA--FRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDK 155
+F A +++ + F +R YD +G+I ELK + L + + + ++ D
Sbjct: 93 IFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDA 152
Query: 156 SFSDADTNGDGKID 169
D N DG++D
Sbjct: 153 XXKIFDKNKDGRLD 166
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 21/136 (15%)
Query: 35 LYELFKKLSSSIFDDGIIHKEEFQLALFRNKNK--KNLFADRIFDLFDLKRNGVIEFGEF 92
L+ +F+++ G+I E Q AL + I +FD + + F EF
Sbjct: 6 LWNVFQRVDKD--RSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 63
Query: 93 VRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETI 152
GV+ ++ FR YD +G I++ ELK+ + S LSD + +
Sbjct: 64 T---GVWKYITDWQN----VFRTYDRDNSGMIDKNELKQAL------SGYRLSDQFHDIL 110
Query: 153 VDKSFSDADTNGDGKI 168
+ K D G G+I
Sbjct: 111 IRK----FDRQGRGQI 122
>pdb|3T2B|A Chain A, Fructose-1,6-Bisphosphate AldolasePHOSPHATASE FROM
THERMOPROTEUS Neutrophilus, Ligand Free
pdb|3T2C|A Chain A, Fructose-1,6-Bisphosphate AldolasePHOSPHATASE FROM
THERMOPROTEUS Neutrophilus, Dhap-Bound Form
pdb|3T2D|A Chain A, Fructose-1,6-Bisphosphate AldolasePHOSPHATASE FROM
THERMOPROTEUS Neutrophilus, Fbp-Bound Form
pdb|3T2E|A Chain A, Fructose-1,6-Bisphosphate AldolasePHOSPHATASE FROM
THERMOPROTEUS Neutrophilus, F6p-Bound Form
pdb|3T2F|A Chain A, Fructose-1,6-Bisphosphate AldolasePHOSPHATASE FROM
THERMOPROTEUS Neutrophilus, Soaked With Edta And Dhap
Length = 407
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 57 FQLALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAF 111
FQL + +LF D FD R + +++R +G F PH L +++ +
Sbjct: 307 FQLHEGYLEGGVDLFDDPAFDYV---RQTAAQIADYIRRMGPFQPHRLPPEEMEY 358
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 76 FDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREE 128
+D D ++G + EF L P L +DK F D + G I R+E
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPD-LTDDKAITCFNTLDFNKNGQISRDE 159
>pdb|3T2G|A Chain A, Fructose-1,6-Bisphosphate AldolasePHOSPHATASE FROM
THERMOPROTEUS Neutrophilus, Y229f Variant With Dhap
Length = 407
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 57 FQLALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAF 111
FQL + +LF D FD R + +++R +G F PH L +++ +
Sbjct: 307 FQLHEGYLEGGVDLFDDPAFDYV---RQTAAQIADYIRRMGPFQPHRLPPEEMEY 358
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 79 FDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIEREELKEMVLALLH 138
D+ N IEF EF+ + E ++ AF+++D G I ELK ++ ++
Sbjct: 55 IDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE 114
Query: 139 ESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVKK 179
+ DD++ + D G G+I+ +++ + K
Sbjct: 115 KLTDAEVDDMLREVSD---------GSGEINIQQFAALLSK 146
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 113 FRLYDLRQTGFIEREELKEMVLALLHESDL----ILSDDVIETIVDKSFSDADTNGDGKI 168
F+++D ++ EL + + E ++S+D + I+D D D N DG I
Sbjct: 55 FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 114
Query: 169 DPEEWKEFVK 178
D + EF K
Sbjct: 115 D---YAEFAK 121
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 31 EVEALYELFKKLSSSIFDDGIIHKEEFQLALFRNKNKKNLFADRIFDLFD---LKRNGVI 87
E+ L ELFK + + + G I +E + L R ++ L I DL D + ++G I
Sbjct: 21 EIGGLKELFKMIDTD--NSGTITFDELKDGLKRVGSE--LMESEIKDLMDAADIDKSGTI 76
Query: 88 EFGEFVRS 95
++GEF+ +
Sbjct: 77 DYGEFIAA 84
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 143 ILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFVK 178
++S+D + I+D D D N DG ID + EF K
Sbjct: 108 LMSEDELINIIDGVLRDDDKNNDGYID---YAEFAK 140
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 113 FRLYDLRQTGFIEREELKEMVLALLHESDL----ILSDDVIETIVDKSFSDADTNGDGKI 168
F+++D ++ EL + + E ++S+D + I+D D D N DG I
Sbjct: 24 FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 83
Query: 169 DPEEWKEFVK 178
D + EF K
Sbjct: 84 D---YAEFAK 90
>pdb|3DJA|A Chain A, Crystal Structure Of Cpaf Solved With Mad
pdb|3DJA|B Chain B, Crystal Structure Of Cpaf Solved With Mad
Length = 579
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
Query: 86 VIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIER-EELKEMVLALL-HESDLI 143
V E G F+ ++GV PH I F D+R G+ E +++K++V L+ ++ +I
Sbjct: 520 VREHGAFIENIGV-EPH------IDLPFTANDIRYKGYSEYLDKVKKLVCQLINNDGTII 572
Query: 144 LSDD 147
L++D
Sbjct: 573 LAED 576
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 107 DKIAFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDG 166
++I AFRL+D +G I ++L+ + L +++ E + + ++AD N D
Sbjct: 9 EEILKAFRLFDDDNSGTITIKDLRRVAKEL--------GENLTEEELQEMIAEADRNDDN 60
Query: 167 KIDPEEWKEFVKK 179
+ID +E+ +KK
Sbjct: 61 EIDEDEFIRIMKK 73
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 112 AFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPE 171
AF+ +D GFI EL+ ++ AL LSD+ ++ I+ + D G+ K
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTALGER----LSDEDVDEIIKLTDLQEDLEGNVK---- 140
Query: 172 EWKEFVKK 179
+++FVKK
Sbjct: 141 -YEDFVKK 147
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 112 AFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPE 171
AF+ +D GFI EL+ ++ AL LSD+ ++ I+ + D G+ K
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTALGER----LSDEDVDEIIKLTDLQEDLEGNVK---- 140
Query: 172 EWKEFVKK 179
+++FVKK
Sbjct: 141 -YEDFVKK 147
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 47/143 (32%)
Query: 75 IFDLFDL--KRNGVIE---FGEFVRSLG----------VFHPHALVEDKIAF-------- 111
+F+LFD R+G ++ G+ R LG V H + E + F
Sbjct: 14 VFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYE 73
Query: 112 ---------------AFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKS 156
AF+ +D GFI EL+ ++ AL LSD+ ++ I+ +
Sbjct: 74 GLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGER----LSDEDVDEIIKLT 129
Query: 157 FSDADTNGDGKIDPEEWKEFVKK 179
D G+ K +++FVKK
Sbjct: 130 DLQEDLEGNVK-----YEDFVKK 147
>pdb|3DOR|A Chain A, Crystal Structure Of Mature Cpaf
pdb|3DOR|B Chain B, Crystal Structure Of Mature Cpaf
pdb|3DPM|A Chain A, Structure Of Mature Cpaf Complexed With Lactacystin
pdb|3DPM|B Chain B, Structure Of Mature Cpaf Complexed With Lactacystin
Length = 583
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 85 GVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIER-EELKEMVLALL-HESDL 142
V E G F+ ++GV PH I F D+R G+ E +++K++V L+ ++ +
Sbjct: 517 AVREHGAFIENIGV-EPH------IDLPFTANDIRYKGYSEYLDKVKKLVCQLINNDGTI 569
Query: 143 ILSDD 147
IL++D
Sbjct: 570 ILAED 574
>pdb|3DPN|A Chain A, Crystal Structure Of Cpaf S499a Mutant
pdb|3DPN|B Chain B, Crystal Structure Of Cpaf S499a Mutant
Length = 583
Score = 26.6 bits (57), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 85 GVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIER-EELKEMVLALL-HESDL 142
V E G F+ ++GV PH I F D+R G+ E +++K++V L+ ++ +
Sbjct: 517 AVREHGAFIENIGV-EPH------IDLPFTANDIRYKGYSEYLDKVKKLVCQLINNDGTI 569
Query: 143 ILSDD 147
IL++D
Sbjct: 570 ILAED 574
>pdb|3QNK|A Chain A, Crystal Structure Of A Hypothetical Susd-Like Protein
(Bf3747) From Bacteroides Fragilis Nctc 9343 At 2.70 A
Resolution
pdb|3QNK|B Chain B, Crystal Structure Of A Hypothetical Susd-Like Protein
(Bf3747) From Bacteroides Fragilis Nctc 9343 At 2.70 A
Resolution
pdb|3QNK|C Chain C, Crystal Structure Of A Hypothetical Susd-Like Protein
(Bf3747) From Bacteroides Fragilis Nctc 9343 At 2.70 A
Resolution
pdb|3QNK|D Chain D, Crystal Structure Of A Hypothetical Susd-Like Protein
(Bf3747) From Bacteroides Fragilis Nctc 9343 At 2.70 A
Resolution
Length = 517
Score = 26.6 bits (57), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 110 AFAFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKI 168
A A +++D+ G E E + + H S + + D VD+ D GDG +
Sbjct: 298 APADQVFDINTCGIYEGREPRFYANIVFHGSQIFFNADKGAVTVDRYLXDTPDKGDGSL 356
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 26.6 bits (57), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 16/111 (14%)
Query: 67 KKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPHALVEDKIAFAFRLYDLRQTGFIER 126
KK + A D FD K+ F + +G+ A D + F + D ++GFIE
Sbjct: 12 KKAIGAFTAADSFDHKK--------FFQMVGLKKKSA---DDVKKVFHILDKDKSGFIEE 60
Query: 127 EELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPEEWKEFV 177
+EL ++ ++ LS +T++ + D +G GKI+ EE+ V
Sbjct: 61 DELGSILKGFSSDA-RDLSAKETKTLM----AAGDKDGSGKIEVEEFSTLV 106
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 26.6 bits (57), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 112 AFRLYDLRQTGFIEREELKEMVLALLHESDLILSDDVIETIVDKSFSDADTNGDGKIDPE 171
AF+ +D GFI EL+ ++ AL LSD+ ++ I+ + D G+ K
Sbjct: 87 AFKTFDREGQGFISGAELRHVLTALGER----LSDEDVDEIIKLTDLQEDLEGNVK---- 138
Query: 172 EWKEFVKK 179
+++FVKK
Sbjct: 139 -YEDFVKK 145
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,480,783
Number of Sequences: 62578
Number of extensions: 272820
Number of successful extensions: 1283
Number of sequences better than 100.0: 276
Number of HSP's better than 100.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 145
Number of HSP's that attempted gapping in prelim test: 856
Number of HSP's gapped (non-prelim): 342
length of query: 213
length of database: 14,973,337
effective HSP length: 95
effective length of query: 118
effective length of database: 9,028,427
effective search space: 1065354386
effective search space used: 1065354386
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)