BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028133
(213 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P31853|ATPX_SPIOL ATP synthase subunit b', chloroplastic OS=Spinacia oleracea GN=ATPG
PE=1 SV=2
Length = 222
Score = 251 bits (640), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/188 (72%), Positives = 155/188 (82%), Gaps = 11/188 (5%)
Query: 29 QIPQIKIPQKLLKLSSSALKSLSAVAVTSLAFS----PPSLAAEIEKAALFDFNLTLPII 84
Q+P +K L+ S LKS +A+ T L S PSLA EIEKA+LFDFNLTLPII
Sbjct: 41 QLPPLK------HLNLSVLKS-AAITATPLTLSFLLPYPSLAEEIEKASLFDFNLTLPII 93
Query: 85 MVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQAAAVMRAARA 144
M EFL LMFALDKIYY+PLG+FMD+RD +IKE+L+ VKDTS EVKQLEEQA AVMRAARA
Sbjct: 94 MAEFLFLMFALDKIYYTPLGDFMDKRDASIKEQLSGVKDTSSEVKQLEEQANAVMRAARA 153
Query: 145 EISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTIKSLDSQIAALSEE 204
EISAAL KMKKETQLEVE KLA GRKKIE ELQEAL +LE+QKEDTIKSLDSQI+ALS++
Sbjct: 154 EISAALNKMKKETQLEVEAKLAEGRKKIEVELQEALGSLEQQKEDTIKSLDSQISALSDD 213
Query: 205 IVRKVLPV 212
IV+KVLPV
Sbjct: 214 IVKKVLPV 221
>sp|A8J785|ATPX_CHLRE ATP synthase subunit b', chloroplastic OS=Chlamydomonas reinhardtii
GN=ATPG PE=1 SV=1
Length = 209
Score = 127 bits (320), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 119/195 (61%), Gaps = 16/195 (8%)
Query: 17 LPITSQSPKPRIQIPQIKIPQKLLKLSSSALKSLSAVAVTSLAFSPPSLAAEIEKAALFD 76
L + + + KP+ Q+ Q+ P +LSA+ +L P A E +FD
Sbjct: 26 LVVRASAQKPQQQLAQLAKP------------ALSAIVANALMAMP----AAAEAGKIFD 69
Query: 77 FNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQAA 136
FNLTLP++ EFL+LM L+K +++P+G +DERDN I+ KL SVKD + +V +L +A
Sbjct: 70 FNLTLPVMAGEFLLLMVFLEKTWFTPVGKVLDERDNLIRSKLGSVKDNTGDVDKLVLEAE 129
Query: 137 AVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTIKSLDS 196
++++AR+++SA + K Q E+++ + KI AE++ ++A LE++ +KSLD+
Sbjct: 130 TILKSARSDVSAMINTKKAAKQSELDKTYNEAKAKITAEVESSIAGLEQESASMLKSLDA 189
Query: 197 QIAALSEEIVRKVLP 211
Q+ +S E++++VLP
Sbjct: 190 QVDKISAEVLKRVLP 204
>sp|P48085|ATPX_CYAPA ATP synthase B' chain, cyanelle OS=Cyanophora paradoxa GN=atpG PE=3
SV=1
Length = 164
Score = 90.1 bits (222), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
Query: 65 LAAEIEKA----ALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNS 120
LA E E A LFDF+ TLP++MV+ LVLM L+ ++Y PL +DER I+ N
Sbjct: 8 LAIETEAAKPEGGLFDFDATLPVMMVQLLVLMLILNAVFYKPLIKILDERKEYIQSNFNE 67
Query: 121 VKDTSEEVKQLEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEAL 180
+ + +L Q + AR S + E Q V +KL +KK ++EL A
Sbjct: 68 AEKCLAQAAELTTQYETKITDARQNASKLTNTTRSEIQRFVSEKLEEAQKKADSELASAT 127
Query: 181 ANLERQKEDTIKSLDSQIAALSEEIVRKVLPVQ 213
LE QK++ +KSL+S++ LS +I+ K+L +Q
Sbjct: 128 NKLELQKDEALKSLESEVQTLSTKILEKLLGIQ 160
>sp|Q112Z3|ATPX_TRIEI ATP synthase subunit b' OS=Trichodesmium erythraeum (strain IMS101)
GN=atpG PE=3 SV=1
Length = 161
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%)
Query: 70 EKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVK 129
EK LFD N TLP++ ++FL+L F LDKI+Y PLG +D R + I+E K+ + K
Sbjct: 15 EKGGLFDINATLPLMAIQFLLLAFVLDKIFYKPLGKAIDSRADYIRENQVKAKERLAKAK 74
Query: 130 QLEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKED 189
QL EQ R + + + E + K+AV +K+ + + ++A +E+QKE
Sbjct: 75 QLAEQYEQEFAQTRQKSQVVIVAAQAEAEKIAATKVAVAQKEAQVKREQAAQEIEKQKEV 134
Query: 190 TIKSLDSQIAALSEEIVRKVL 210
++ L+ Q+ +LS +I+ K+L
Sbjct: 135 ALEQLEEQVDSLSRQILEKLL 155
>sp|Q8DLP6|ATPX_THEEB ATP synthase subunit b' OS=Thermosynechococcus elongatus (strain
BP-1) GN=atpG PE=3 SV=1
Length = 138
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 87/141 (61%), Gaps = 8/141 (5%)
Query: 74 LFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKD----TSEEVK 129
+FDF+ TLP++ V+FL+L L+ + Y PLG +D RD I+ L K+ +E +
Sbjct: 1 MFDFDATLPLMAVQFLILTVILNALLYKPLGQALDNRDEYIRTNLQQAKERLQQATELAQ 60
Query: 130 QLEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKED 189
Q E++ A+ R A+A I A + +K E+ A ++ ++AEL + A +++QK+
Sbjct: 61 QYEQELASTRRQAQALIEEARVEAQKIATAEI----AEAQQAVQAELLKIQAEIDQQKQA 116
Query: 190 TIKSLDSQIAALSEEIVRKVL 210
T+++L+ Q+A+LSE+++ K++
Sbjct: 117 TLQALEGQVASLSEQLLAKLM 137
>sp|A6MVW7|ATPX_RHDSA ATP synthase subunit b', chloroplastic OS=Rhodomonas salina GN=atpG
PE=3 SV=1
Length = 155
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 86/147 (58%), Gaps = 8/147 (5%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDT---SEE 127
+ LFDFN TLP+++++ L+LM L+ I+Y+P+ +DERD I++ L +T +E
Sbjct: 10 EGGLFDFNATLPLMVLQILLLMVVLNAIFYTPIARVLDERDEYIRKNLTQASETLAKAEA 69
Query: 128 V-KQLEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQ 186
+ KQ E+ A R A+ I+++ + ++ +E++Q +K E + EA L Q
Sbjct: 70 ITKQYEQDLAKERRDAQMIIASSQQEAQEIVAMEIKQ----AQKDTELLVNEATTQLNSQ 125
Query: 187 KEDTIKSLDSQIAALSEEIVRKVLPVQ 213
KE +++L+ Q+ LSE+I K+L Q
Sbjct: 126 KEKALQALEKQVNTLSEQIKNKLLSGQ 152
>sp|B0BZK9|ATPX_ACAM1 ATP synthase subunit b' OS=Acaryochloris marina (strain MBIC 11017)
GN=atpG PE=3 SV=1
Length = 142
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 76/138 (55%)
Query: 74 LFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEE 133
+FDFN TLP++M +F +L+ L+ +++ PL +DERD I+ ++ + K L E
Sbjct: 1 MFDFNGTLPLMMFQFFLLVAVLNAVFFKPLTQAIDERDGFIRTNNTEARERLAKAKSLTE 60
Query: 134 QAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTIKS 193
Q + R + L + E Q + ++ +K+++AE+ +A A LE QK+
Sbjct: 61 QYEQELAGTRKQSQQVLADAQAEAQKIAQTQITEAQKQVQAEVMKAQAELESQKQSAFSE 120
Query: 194 LDSQIAALSEEIVRKVLP 211
L+ Q+ LS++I+ K+L
Sbjct: 121 LEKQVDTLSQQILNKLLG 138
>sp|B1XHZ1|ATPX_SYNP2 ATP synthase subunit b' OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=atpG PE=3 SV=1
Length = 161
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 79/141 (56%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQ 130
+ LFDF+ TLP++ ++FLVL L+K++Y P+G +D+R + I+ L K+ ++ +
Sbjct: 18 EGGLFDFDATLPVMAIQFLVLAALLNKLFYKPIGQAIDDRSDYIRTNLVDAKERQQKAED 77
Query: 131 LEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDT 190
L Q +R R E + K + E Q V ++ + + AE ++A +E Q+E
Sbjct: 78 LAAQYEQELRDVRREAQDVIAKAQAEAQKVVADEVKSAQAEALAEREKAALEIEAQRESA 137
Query: 191 IKSLDSQIAALSEEIVRKVLP 211
KSL+ Q+ +LS+ I K++
Sbjct: 138 FKSLEQQVDSLSQAIASKLVG 158
>sp|Q1XDP2|ATPX_PORYE ATP synthase subunit b', chloroplastic OS=Porphyra yezoensis
GN=atpG PE=3 SV=1
Length = 156
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 85/156 (54%), Gaps = 9/156 (5%)
Query: 62 PPSLAAEIEKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSV 121
P LA EIE LFDFN TLP++ ++FL LM L+ I+Y P+ +DERD I+ L +
Sbjct: 5 PFLLAEEIE-GGLFDFNGTLPLMALQFLTLMVLLNTIFYKPVTKVLDERDEYIRTTLTTA 63
Query: 122 KD----TSEEVKQLEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQ 177
E + EE + R A+ +I+++ +KE Q V + + + E +
Sbjct: 64 SSMLVKADELAAKYEEDLSEARRNAQLKIASS----QKEAQNIVSEDIKKAQLNAEKLIA 119
Query: 178 EALANLERQKEDTIKSLDSQIAALSEEIVRKVLPVQ 213
EA L QKE+ +K+L++Q+ LS++I K+L Q
Sbjct: 120 EASKQLNVQKEEALKTLENQVDTLSDQIKVKLLSSQ 155
>sp|Q6B8R1|ATPX_GRATL ATP synthase subunit b', chloroplastic OS=Gracilaria tenuistipitata
var. liui GN=atpG PE=3 SV=1
Length = 158
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 9/150 (6%)
Query: 65 LAAEIEKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLN----S 120
L+ E+E LFDFN TLP++ ++F++L L+ I+Y P+ N +DERD I+ L S
Sbjct: 12 LSTEVE-GGLFDFNATLPLMALQFIILTTILNFIFYKPVTNVLDERDEYIRNSLTTASAS 70
Query: 121 VKDTSEEVKQLEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEAL 180
+ E K E+Q A + A+ I A + ++ ++++ A G K + EA
Sbjct: 71 LVKADELTKTYEQQLAESRKKAQDIIKVAQEQAQQIVSVKIKDAQAYGEKLVS----EAF 126
Query: 181 ANLERQKEDTIKSLDSQIAALSEEIVRKVL 210
L QKED +K+L+ Q+ LS+ I K+L
Sbjct: 127 HQLSIQKEDALKTLEMQVDTLSDLIKSKLL 156
>sp|B7T1R9|ATPX_VAULI ATP synthase subunit b', chloroplastic OS=Vaucheria litorea GN=atpG
PE=3 SV=1
Length = 154
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 31/168 (18%)
Query: 58 LAFSPPSLAAEIEKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEK 117
L FS L E + LFDF+ TLP+I ++FL+LMF L+ + Y+PL +DER I
Sbjct: 2 LKFSFLFLTVE-KPGGLFDFDGTLPLIAIQFLILMFLLNILLYTPLLKIIDERSEYIANN 60
Query: 118 LNSVKDTSEEVKQLEEQAAAVMRAARAEISAA----LTKMKKETQLE-----------VE 162
L Q A+++ E+S+ +K+KKE +L+ +E
Sbjct: 61 L---------------QEASIILNKANELSSQYEKEFSKIKKEVELDSLTLQNLHKNILE 105
Query: 163 QKLAVGRKKIEAELQEALANLERQKEDTIKSLDSQIAALSEEIVRKVL 210
++ +K E L + + N + +KE + SLD +I +LS EI+ K++
Sbjct: 106 IEIISSQKIFENYLNQTINNFDSEKEKILTSLDEEINSLSSEIITKIV 153
>sp|P35012|ATPX_GALSU ATP synthase subunit b', chloroplastic OS=Galdieria sulphuraria
GN=atpG PE=3 SV=1
Length = 157
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%)
Query: 72 AALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQL 131
LFDF+ TL I +EFL+L L+ IYY P+ +D R++ I+E LN ++ +L
Sbjct: 15 GGLFDFDATLSFIALEFLLLTSVLNLIYYQPISKVIDSREDYIRENLNKASLYLDQANEL 74
Query: 132 EEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTI 191
++ + AR E +T + E Q V +++ +K+ + +Q ++ E++K I
Sbjct: 75 TKKYELELITARKEAIKMVTTSQTEAQEFVNAQISQAQKEAQQLIQSSMMQFEKEKNKAI 134
Query: 192 KSLDSQIAALSEEIVRKVLPV 212
SL+ Q+ LSE+I K++ +
Sbjct: 135 YSLEKQVEQLSEQIKNKLISI 155
>sp|B2J055|ATPX_NOSP7 ATP synthase subunit b' OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=atpG PE=3 SV=1
Length = 143
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 82/141 (58%), Gaps = 8/141 (5%)
Query: 74 LFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIK----EKLNSVKDTSEEVK 129
+FDF+ TLP + ++FL+L L+ I+Y PL +D+RD+ I+ E S+
Sbjct: 1 MFDFDATLPFMALQFLLLAAVLNAIFYKPLTKVLDDRDSYIRTNTLEARESLAKAERLAT 60
Query: 130 QLEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKED 189
+ E+Q A R ++A + AA + KK T +K+A +K+ +++ ++A +E+QK+
Sbjct: 61 EYEQQLADARRQSQATVEAAQLEAKKIT----AEKIAEAQKEAQSQREQASVEIEQQKQQ 116
Query: 190 TIKSLDSQIAALSEEIVRKVL 210
+L+ Q+ ALS +I+ K+L
Sbjct: 117 AFSTLEQQVDALSRQILEKLL 137
>sp|O78478|ATPX_GUITH ATP synthase subunit b', chloroplastic OS=Guillardia theta GN=atpG
PE=3 SV=1
Length = 163
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 81/147 (55%), Gaps = 8/147 (5%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDT---SEE 127
+ LFDFN TLP++ V+ L+ M L+ ++Y+P+ +DER+ I++ L D +E
Sbjct: 18 EGGLFDFNATLPLMAVQILLFMVILNAVFYNPVAKVLDEREEYIRKNLTQASDILAKAEA 77
Query: 128 V-KQLEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQ 186
+ KQ E+ A R A+ IS A + + LE++Q +K E + EA + L Q
Sbjct: 78 ITKQYEKDLAQERREAQLIISVAQKEAQDIVALEIKQ----AQKDTELLVNEATSQLNSQ 133
Query: 187 KEDTIKSLDSQIAALSEEIVRKVLPVQ 213
K+ + +L+ Q+ L+E+I K+L Q
Sbjct: 134 KQKALSALEDQVNTLTEQIKSKLLSNQ 160
>sp|Q40608|ATPX_OCHNE ATP synthase subunit b', chloroplastic OS=Ochrosphaera neapolitana
GN=atpG PE=3 SV=1
Length = 163
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 11/161 (6%)
Query: 60 FSPP---SLAAEIEKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKE 116
FS P LA + LFDFN TLP++ ++F++L L ++Y P+GN ++ER+ I
Sbjct: 4 FSMPLGQMLALSEGEGGLFDFNATLPLMALQFILLTVILTFVFYKPIGNLLEEREAYING 63
Query: 117 KLNSVK----DTSEEVKQLEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKI 172
L+ E KQ EEQ ++ A+A+ + + + E + V +LA RK
Sbjct: 64 NLSDASAKLLQADELCKQYEEQ----LKDAKADAQSCIADAETEAKQVVALELAQARKDA 119
Query: 173 EAELQEALANLERQKEDTIKSLDSQIAALSEEIVRKVLPVQ 213
+ +++ LE QKE +K L++QI LS+ I K+L Q
Sbjct: 120 ASLVEQVNKELEAQKELALKQLEAQIDELSQLIKEKLLGKQ 160
>sp|Q05367|ATPX_SYNP1 ATP synthase subunit b' OS=Synechococcus sp. (strain PCC 6716)
GN=atpG PE=3 SV=1
Length = 159
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 84/137 (61%)
Query: 74 LFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEE 133
+FDF+ TLP++ V+FL+L L+ + Y PLG +D RD I+ L K+ ++ +L
Sbjct: 22 MFDFDATLPLMAVQFLILTVILNALLYKPLGQALDNRDEYIRTNLQQAKERLQQATELAN 81
Query: 134 QAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTIKS 193
Q + R E A + + + E Q ++A ++ ++AEL +A A +++QK+ T+++
Sbjct: 82 QYEQELAYTRREAQAIIEEARAEAQKIATAEIAAAQQALQAELMKAQAEIDQQKQATLQA 141
Query: 194 LDSQIAALSEEIVRKVL 210
L+ Q+++LSE+++ K+L
Sbjct: 142 LEGQVSSLSEQLLAKLL 158
>sp|B0JWU8|ATPX_MICAN ATP synthase subunit b' OS=Microcystis aeruginosa (strain NIES-843)
GN=atpG PE=3 SV=1
Length = 143
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 80/137 (58%)
Query: 74 LFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEE 133
+FDF+ TLP++ ++F++L L+ ++Y PL +DER I++ + K+ + + L +
Sbjct: 1 MFDFDATLPVMALQFILLAVILNAVFYKPLSKVLDERAEYIRQTESGAKEQLAKTEALVQ 60
Query: 134 QAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTIKS 193
+ + +AR + + + + E Q +++A +K+ A + A + +QKE+ +S
Sbjct: 61 EYELQLSSARKQSQEIIAQAQAEAQKLASERVAAAQKEAIARKEAVAAEIAQQKEEAFRS 120
Query: 194 LDSQIAALSEEIVRKVL 210
L+ Q+A+LS +I+ K+L
Sbjct: 121 LEGQVASLSRQILEKLL 137
>sp|P08446|ATPX_SYNP6 ATP synthase subunit b' OS=Synechococcus sp. (strain ATCC 27144 /
PCC 6301 / SAUG 1402/1) GN=atpG PE=3 SV=1
Length = 158
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 80/140 (57%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQ 130
+ LFD + TLP++ V+ LVL+F L+ ++Y P G +D+RD ++ K EVK
Sbjct: 16 EGGLFDLDATLPLMAVQILVLVFLLNAVFYKPFGKVLDDRDQFVRGGRQDAKARLAEVKA 75
Query: 131 LEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDT 190
L Q + A R + A + + + E Q+LA +++ +A+ ++A +++QK
Sbjct: 76 LTAQYEQELAATRKQSQALIAEAQTEAGRIAAQQLAEAQREAQAQREQAQQEIDQQKAVA 135
Query: 191 IKSLDSQIAALSEEIVRKVL 210
+++LD Q+ ALS +I+ K+L
Sbjct: 136 LQALDQQVDALSHQILDKLL 155
>sp|Q31RF4|ATPX_SYNE7 ATP synthase subunit b' OS=Synechococcus elongatus (strain PCC
7942) GN=atpG PE=3 SV=1
Length = 158
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 80/140 (57%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQ 130
+ LFD + TLP++ V+ LVL+F L+ ++Y P G +D+RD ++ K EVK
Sbjct: 16 EGGLFDLDATLPLMAVQILVLVFLLNAVFYKPFGKVLDDRDQFVRGGRQDAKARLAEVKA 75
Query: 131 LEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDT 190
L Q + A R + A + + + E Q+LA +++ +A+ ++A +++QK
Sbjct: 76 LTAQYEQELAATRKQSQALIAEAQTEAGRIAAQQLAEAQREAQAQREQAQQEIDQQKAVA 135
Query: 191 IKSLDSQIAALSEEIVRKVL 210
+++LD Q+ ALS +I+ K+L
Sbjct: 136 LQALDQQVDALSHQILDKLL 155
>sp|Q7NCS0|ATPX_GLOVI ATP synthase subunit b' OS=Gloeobacter violaceus (strain PCC 7421)
GN=atpG PE=3 SV=1
Length = 174
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%)
Query: 72 AALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQL 131
LFDF TL + +V FL+LM L ++Y P+ ++ER I+ S + +E K L
Sbjct: 29 GGLFDFGGTLVLQIVNFLLLMTILSAVFYGPISRVIEERSEYIRSNAGSAQRRFDEAKAL 88
Query: 132 EEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTI 191
+Q +R R E + + E Q Q+LA +++ + + +A A+L++QK+ +
Sbjct: 89 ADQYEQELRTTRLEAQQVIAAAEAEAQKIRAQQLAEAQREAQERIAQAQADLDKQKQAAL 148
Query: 192 KSLDSQIAALSEEIVRKVLP 211
SL ++ A+S + K+L
Sbjct: 149 ASLSGEVEAISRTLSEKLLS 168
>sp|P27183|ATPX_SYNY3 ATP synthase subunit b' OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=atpG PE=3 SV=1
Length = 143
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 79/137 (57%)
Query: 74 LFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEE 133
+FDF+ TLP++ ++F+VL F L+ I+Y P+ +DER + I+ ++ + K + +
Sbjct: 1 MFDFDATLPLMALQFVVLAFLLNAIFYKPMNKVLDERADYIRTNEEDARERLAKAKAITQ 60
Query: 134 QAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTIKS 193
+ + AR + A + + E + +K+A +++ + + + A +E Q++ + S
Sbjct: 61 EYEQQITDARRQSQAVIADAQAEARRLAAEKIAEAQRESQRQKETAAQEIEAQRQSALSS 120
Query: 194 LDSQIAALSEEIVRKVL 210
L+ ++AALS +I+ K+L
Sbjct: 121 LEQEVAALSNQILHKLL 137
>sp|Q2JSV8|ATPX_SYNJA ATP synthase subunit b' OS=Synechococcus sp. (strain JA-3-3Ab)
GN=atpG PE=3 SV=1
Length = 157
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 81/149 (54%), Gaps = 14/149 (9%)
Query: 70 EKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVK 129
EK LFD + TLPII V+FL+L+ L+ ++Y P+ +D R++ I + T E +
Sbjct: 13 EKNGLFDLDATLPIIAVQFLLLVAVLNSLFYEPVTRVIDSRNDYI-------RTTQAEAQ 65
Query: 130 QLEEQAAAVMRAARAEISAALTKMKK-------ETQLEVEQKLAVGRKKIEAELQEALAN 182
+ ++A A+ R AEI A + ++ +KLA + +I+A+L+ A
Sbjct: 66 ERLDKAMALTRQYEAEIGQARLQAQQVIAEAEAAAARIRSEKLAAAQAEIQAKLEAARRQ 125
Query: 183 LERQKEDTIKSLDSQIAALSEEIVRKVLP 211
+E++K+ ++ L Q+ A++ +I K+L
Sbjct: 126 IEQEKQTALEQLQQQVDAIAAQITEKLLG 154
>sp|P51245|ATPX_PORPU ATP synthase subunit b', chloroplastic OS=Porphyra purpurea GN=atpG
PE=3 SV=1
Length = 158
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 87/158 (55%), Gaps = 9/158 (5%)
Query: 60 FSPPSLAAEIEKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLN 119
+ P LA EIE LFDFN TLP++ ++FL+LM L+ I+Y P+ +DERD I+ L
Sbjct: 3 YLPLLLAEEIE-GGLFDFNGTLPLMALQFLILMLLLNTIFYKPVTKILDERDEYIRTTLT 61
Query: 120 SVKD----TSEEVKQLEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAE 175
+ E + EE + R A+A+I+A+ +K+ Q V + + + E
Sbjct: 62 TASSMLVKADELAAKYEEDLSKARRDAQAKIAAS----QKDAQSIVSEDIKKAQMNAEKL 117
Query: 176 LQEALANLERQKEDTIKSLDSQIAALSEEIVRKVLPVQ 213
+ EA L QKE+ +K+L+ Q+ LS++I K+L Q
Sbjct: 118 ITEASKQLNIQKEEALKTLEDQVDTLSDQIKTKLLSSQ 155
>sp|Q02852|ATPX_ANTSP ATP synthase subunit b', chloroplastic OS=Antithamnion sp. GN=atpG
PE=3 SV=1
Length = 159
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQ 130
+ LFDFN TLP++ ++FL L L+ IYY PLG +DERD I L + +
Sbjct: 18 QGGLFDFNATLPLMALQFLALTIILNLIYYKPLGKILDERDEYIANSLTAASAALSKAND 77
Query: 131 LEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDT 190
L ++ + +R + + +++ Q V K+ +K + + L QKE
Sbjct: 78 LTKRYEQDLAESRKKAQDIIKNAQQDAQNIVSSKIKEAQKDADQLMSNTYDQLNIQKEQA 137
Query: 191 IKSLDSQIAALSEEIVRKVLP 211
+++L+ Q+ LS +I K+L
Sbjct: 138 LQNLEKQVDILSNQIQIKLLG 158
>sp|Q9TM29|ATPX_CYACA ATP synthase subunit b', chloroplastic OS=Cyanidium caldarium
GN=atpG PE=3 SV=1
Length = 157
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 76/141 (53%)
Query: 70 EKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVK 129
E LFDF+ TLP++ +FL++M LD +Y P+ + +R+N I + L S SE+ K
Sbjct: 13 ESGGLFDFDATLPLMASQFLLIMLILDITFYKPINKVLKDRENYILKTLESATQISEKTK 72
Query: 130 QLEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKED 189
+ + V+ ++ E + +K +T+ ++ +L + + +++ L R+KE
Sbjct: 73 ETLARYEEVILKSKKESQQLIDSIKTKTEHDIVNELIQTQNSTREFISKSIKELYRKKEQ 132
Query: 190 TIKSLDSQIAALSEEIVRKVL 210
T+K L+ LS++I K++
Sbjct: 133 TLKVLEEDTENLSDKIYLKLI 153
>sp|B7K5I5|ATPX_CYAP8 ATP synthase subunit b' OS=Cyanothece sp. (strain PCC 8801) GN=atpG
PE=3 SV=1
Length = 143
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 79/137 (57%)
Query: 74 LFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEE 133
+FDF+ TLP++ ++F++L L+ I+Y+PL +DER + I++K K+ + K+L +
Sbjct: 1 MFDFDATLPVMALQFILLAVILNGIFYTPLNKALDERADYIRQKETDEKERLAKAKELAQ 60
Query: 134 QAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTIKS 193
+ + AR + + + + Q + LA +K+ +A+ +EA + +Q++ +
Sbjct: 61 EYEKQLADARKQSQEVIAAAQADAQKIAAEALAKAQKEAQAKKEEAAVEIAQQRQAALGV 120
Query: 194 LDSQIAALSEEIVRKVL 210
L+ Q+ LS +I+ K+L
Sbjct: 121 LEQQVDVLSRQILEKLL 137
>sp|Q24MN7|ATPF_DESHY ATP synthase subunit b OS=Desulfitobacterium hafniense (strain Y51)
GN=atpF PE=3 SV=1
Length = 164
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 75 FDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQ 134
F+LTL + ++ FL+L++ L + ++PL N M+ER + I+ + + + + +Q++ +
Sbjct: 4 IHFDLTLVVQVLSFLLLVYILRRFAWNPLINMMEERRSQIEANIANAEKERLQAEQIKRE 63
Query: 135 AAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTIKSL 194
MR AR E + K K ++ + LA + E Q ALA++ER+++ I +
Sbjct: 64 YQEEMRKARQEAQEVIAKATKLSEQRAAEILAAAHGEAEKIKQSALADIERERDRAIAQV 123
Query: 195 DSQIAALS----EEIVRKVLPVQ 213
+Q+A LS E+I+RK L V+
Sbjct: 124 QAQVADLSVAVAEKIIRKNLDVR 146
>sp|Q00823|ATPX_ODOSI ATP synthase subunit b', chloroplastic OS=Odontella sinensis
GN=atpG PE=3 SV=1
Length = 156
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
Query: 72 AALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDT----SEE 127
LFD N TLP++ ++FL+LM L+ I YSPL ++ER I KL + +E
Sbjct: 17 GGLFDINATLPLVAIQFLLLMVLLNVILYSPLLTIIEERKEYILNKLAKASEILSQANEL 76
Query: 128 VKQLEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQK 187
Q E++ V + A+ EI+ + K+ KE LE+E L + +K I+ L+ +L +K
Sbjct: 77 TAQYEQELNTVRKEAQLEITNS-QKIHKEI-LEIE--LNISQKYIDNLLENITDDLLEKK 132
Query: 188 EDTIKSLDSQIAALSEEI 205
+ SLD+ + +L +I
Sbjct: 133 NTALNSLDTIVQSLCVQI 150
>sp|B7KKR7|ATPX_CYAP7 ATP synthase subunit b' OS=Cyanothece sp. (strain PCC 7424) GN=atpG
PE=3 SV=1
Length = 143
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 82/137 (59%)
Query: 74 LFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEE 133
+FDF+ TLP++ ++FLVL L+ ++Y PLG +D R + I+ N ++ + + L +
Sbjct: 1 MFDFDATLPLMALQFLVLAVVLNAVFYKPLGKALDSRADYIRSNENQAREQLAKAQNLAQ 60
Query: 134 QAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTIKS 193
+ + AR + + + + + + ++K+A +K+ +A+ + A +E+QK++ + +
Sbjct: 61 EYEKQLGDARRQSNEIIAAAQAQAKQIADEKIAQAQKEAQAQKEAAAKEIEQQKQEAMTA 120
Query: 194 LDSQIAALSEEIVRKVL 210
L+ Q+ ALS +I+ K+L
Sbjct: 121 LEQQVDALSRQILEKIL 137
>sp|A5GV75|ATPX_SYNR3 ATP synthase subunit b' OS=Synechococcus sp. (strain RCC307)
GN=atpG PE=3 SV=1
Length = 155
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 74/140 (52%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQ 130
K LFD + TLP++ V+ +VL F L+ +++ P+G +++R+ I K+ + ++
Sbjct: 14 KGGLFDLDATLPLMAVQVVVLTFVLNALFFRPVGKTVEDREGYISTSRAQAKEKLAQAER 73
Query: 131 LEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDT 190
LE + A + AR + A + K ++E + LAV + + + ++A ++ +K
Sbjct: 74 LEAELKAQLLDARKQSVAVIQKAEEEVDRLFREALAVAQSEANSVREKARGEVDAEKAKA 133
Query: 191 IKSLDSQIAALSEEIVRKVL 210
+DSQ LS IV ++L
Sbjct: 134 FSGIDSQAEKLSSLIVDRLL 153
>sp|Q85FR1|ATPX_CYAME ATP synthase subunit b', chloroplastic OS=Cyanidioschyzon merolae
GN=atpG PE=3 SV=1
Length = 143
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 84/139 (60%)
Query: 72 AALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQL 131
LFDFN TLP++ ++ ++L + L++I YSP+ + +R N I+++L D ++ +QL
Sbjct: 3 TGLFDFNGTLPVMGLQVVLLSWLLEQILYSPIQGVIQKRQNKIQQELQLAADQLQKAQQL 62
Query: 132 EEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTI 191
++ ++ AR + + ++++E Q +E +L ++++ EA+ LE+QK+ +
Sbjct: 63 TQEYQTQLQKAREKARERIRQVQQEAQTMMEDQLKQAQQQMTQLFNEAMQQLEQQKQQAL 122
Query: 192 KSLDSQIAALSEEIVRKVL 210
+L +Q+ +++ I+ K++
Sbjct: 123 MNLSNQVDEVAKFILSKLM 141
>sp|Q3M9V7|ATPX_ANAVT ATP synthase subunit b' OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=atpG PE=3 SV=1
Length = 163
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 77/141 (54%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQ 130
+ LFD + TLP++ ++FL+L L+ Y PLG +D R+ ++ ++ + ++
Sbjct: 16 EGGLFDLDATLPLMAIQFLLLALVLNATLYKPLGKAIDGRNEYVRNNQLEAQERLSKAEK 75
Query: 131 LEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDT 190
L E + AR + + + E Q +K+A +K+ +A+ ++A +E+QK+
Sbjct: 76 LAEAYEQELAGARRQAQTIIADAQAEAQKIAAEKVAAAQKEAQAQREQAAGEIEQQKQQA 135
Query: 191 IKSLDSQIAALSEEIVRKVLP 211
+ SL+ Q+ ALS +I+ K+L
Sbjct: 136 LASLEQQVDALSRQILEKLLG 156
>sp|A0T0P1|ATPX_THAPS ATP synthase subunit b', chloroplastic OS=Thalassiosira pseudonana
GN=atpG PE=3 SV=1
Length = 156
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 72 AALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQL 131
LFD N TLP++ ++F++LM L+ I YSPL ++ER + L + + K+L
Sbjct: 17 GGLFDINATLPLVAIQFILLMVTLNIILYSPLLTIIEERKEYVLSHLAQASEKLAQAKEL 76
Query: 132 EEQAAAVMRAAR--AEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKED 189
Q + AR A++ A ++ + L++E L + +K I+ L+ ++L +K+
Sbjct: 77 TTQYEQDLETARKEAQLEIANSQNIHKEILDIE--LDISQKYIDNLLETISSDLLNKKKT 134
Query: 190 TIKSLDSQIAALSEEIVRKV 209
+ SLD+ + +L E+ K+
Sbjct: 135 ALDSLDTIVTSLCTEVETKL 154
>sp|B1WUH9|ATPX_CYAA5 ATP synthase subunit b' OS=Cyanothece sp. (strain ATCC 51142)
GN=atpG PE=3 SV=1
Length = 143
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 78/137 (56%)
Query: 74 LFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEE 133
+FDF+ TLP++ ++F++L L+ I+Y PL +DER + I++ + E K+L
Sbjct: 1 MFDFDATLPLMALQFVLLAIILNAIFYKPLNKALDERADYIRQNETGGQQQLAEAKELAA 60
Query: 134 QAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTIKS 193
+ + AR E + + + E + + +A +K+ A+ + A +E+Q+++ +K+
Sbjct: 61 KYEQQLAQARKESQDIVAQAQAEAKQLATEAVAEAQKEAIAKKEAAAQEIEQQRQEALKT 120
Query: 194 LDSQIAALSEEIVRKVL 210
L+ Q+ LS +I+ K+L
Sbjct: 121 LEQQVDTLSRQILEKLL 137
>sp|P12410|ATPX_NOSS1 ATP synthase subunit b' OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=atpG PE=3 SV=1
Length = 163
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 77/141 (54%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQ 130
+ LFD + TLP++ ++FL+L L+ Y PLG +D R+ ++ ++ + ++
Sbjct: 16 EGGLFDLDATLPLMAIQFLLLALILNATLYKPLGKAIDGRNEYVRNNQLEAQERLSKAEK 75
Query: 131 LEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDT 190
L E + AR + + + E Q +K+A +K+ +A+ ++A +E+QK+
Sbjct: 76 LAEAYEQELAGARRQAQTIIADAQAEAQKIAAEKVAAAQKEAQAQREQAAGEIEQQKQQA 135
Query: 191 IKSLDSQIAALSEEIVRKVLP 211
+ SL+ Q+ ALS +I+ K+L
Sbjct: 136 LASLEQQVDALSRQILEKLLG 156
>sp|B1X3Y3|ATPX_PAUCH ATP synthase subunit b', organellar chromatophore OS=Paulinella
chromatophora GN=atpG PE=3 SV=1
Length = 156
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 73/144 (50%)
Query: 67 AEIEKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSE 126
A + + LFD + TLP++ ++ + L F L+ I++ P+G ++ER+N + K
Sbjct: 10 AGVPEGGLFDLDATLPLMAIQVVFLTFILNAIFFRPIGRTVEERENYVASSRADAKQKLA 69
Query: 127 EVKQLEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQ 186
+V++LE +R AR + + + ++E ++ L + + + + + +E Q
Sbjct: 70 QVERLEANLTEQLRGARKQSQTVIAEAEEEVNRLYQEALRMAQAEANNIRESSRREIEIQ 129
Query: 187 KEDTIKSLDSQIAALSEEIVRKVL 210
K IKSL + LS IV ++L
Sbjct: 130 KAAAIKSLQGDVDRLSNLIVDRLL 153
>sp|Q4G3A0|ATPX_EMIHU ATP synthase subunit b', chloroplastic OS=Emiliania huxleyi GN=atpG
PE=3 SV=1
Length = 162
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%)
Query: 72 AALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQL 131
LFDFN TLP+ ++F++L L I+Y P+G ++ER+ I L + +L
Sbjct: 19 GGLFDFNATLPLQALQFILLTVLLTFIFYKPIGKLLEERETFISNNLAEASAKLLKADEL 78
Query: 132 EEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTI 191
EQ ++ A+ + K + E + V Q++ R + + + LE QK+ +
Sbjct: 79 CEQYETQLKEAKTGAQDVIAKAESEAKGIVAQEITQARADAASLIAQTNKELEAQKKLAL 138
Query: 192 KSLDSQIAALSEEIVRKVLP 211
+ L++QI LS+ I K+L
Sbjct: 139 QQLETQIDELSQLIKEKLLG 158
>sp|A7GV60|ATPF_BACCN ATP synthase subunit b OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=atpF PE=3 SV=1
Length = 168
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 73/131 (55%)
Query: 80 TLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQAAAVM 139
T+ +V FL+L+ L K + PL M ER+ + ++++ + E K+L E+ ++
Sbjct: 14 TIAYTLVVFLILLVMLRKFAWGPLMGIMKEREEHVASEIDAAEKNHAEAKKLVEEQREML 73
Query: 140 RAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDTIKSLDSQIA 199
+ +R E + + KK+ + + + +A +++ E+ A+ ++R+KE I +L Q+A
Sbjct: 74 KQSRVEAQELIERAKKQAEEQKDGIIAAAKEEAESIKTSAVQEIQREKEQAIATLQEQVA 133
Query: 200 ALSEEIVRKVL 210
+LS +I KV+
Sbjct: 134 SLSVQIASKVI 144
>sp|Q2JIF7|ATPX_SYNJB ATP synthase subunit b' OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=atpG PE=3 SV=1
Length = 157
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 87/159 (54%), Gaps = 15/159 (9%)
Query: 60 FSPPSLAAEI-EKAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKL 118
F P LA E EK LFD + TLP+I ++FL+L+ L+ ++Y P+ +D R++ I
Sbjct: 2 FFPTLLAVEAAEKGGLFDLDATLPLIAIQFLLLVAVLNSLFYEPVTRAIDSRNDYI---- 57
Query: 119 NSVKDTSEEVKQLEEQAAAVMRAARAEISAALTKMKK-------ETQLEVEQKLAVGRKK 171
+ T E ++ ++A ++ R +EIS A + ++ +KLA + +
Sbjct: 58 ---RTTQAEAQERLDKAVSLTRQYESEISQARLQAQQVIAEAEAAAARIRSEKLAAVQAE 114
Query: 172 IEAELQEALANLERQKEDTIKSLDSQIAALSEEIVRKVL 210
I+ +L+ A +E++K+ ++ L Q+ A++ +I +K+L
Sbjct: 115 IQQKLEAARLQVEQEKQAALEQLQQQVDAIAAQITQKLL 153
>sp|A2C4J8|ATPX_PROM1 ATP synthase subunit b' OS=Prochlorococcus marinus (strain NATL1A)
GN=atpG PE=3 SV=1
Length = 153
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 78/140 (55%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQ 130
+ LFDF+ TLP++ V+ ++L F L+ +++ P+G ++ER++ + K EV+
Sbjct: 11 EGGLFDFDATLPLMAVQVVLLTFILNALFFKPVGRVVEEREDYVNTSRAEAKKKIAEVEL 70
Query: 131 LEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDT 190
LE + ++ AR E + + +++++ ++ LA+ + A ++A ++ Q+++
Sbjct: 71 LETELKDQLKEARLEAQKVILEAEQDSENLYKEALALATSEANASREKARREIDSQRDEA 130
Query: 191 IKSLDSQIAALSEEIVRKVL 210
+ L S+ L + I+ ++L
Sbjct: 131 LNQLKSEADNLGDLIIERLL 150
>sp|Q7V034|ATPX_PROMP ATP synthase subunit b' OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=atpG PE=3 SV=1
Length = 153
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 75/140 (53%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQ 130
+ LFD N TLP++ ++ + L + L+ +++ P+GN +++R+ + + K+ EV++
Sbjct: 11 EGGLFDINATLPLMAIQVVALTYILNSLFFKPVGNVVEKREKFVSNNIMDAKNKLSEVEK 70
Query: 131 LEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDT 190
LE + +++AR E +++ + E+ ++ LA+ + A ++A +E Q
Sbjct: 71 LEADLLSQLQSARYEAQKIVSEAENESDKLYKEALALANDEANASKEKARLEIENQTSSA 130
Query: 191 IKSLDSQIAALSEEIVRKVL 210
L Q LSE IV +++
Sbjct: 131 RDQLFKQADDLSELIVNRLI 150
>sp|A3PEU2|ATPX_PROM0 ATP synthase subunit b' OS=Prochlorococcus marinus (strain MIT
9301) GN=atpG PE=3 SV=1
Length = 153
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 73/140 (52%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQ 130
+ LFD N TLP++ ++ + L + L+ +++ P+GN +++R+ + + K+ EVK+
Sbjct: 11 EGGLFDINATLPLMAIQVVALTYILNSLFFKPVGNVVEKREKFVSNNVIEAKNKLSEVKK 70
Query: 131 LEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDT 190
LE +++AR E +++ + E+ ++ L + + A ++A +E Q
Sbjct: 71 LEADLLTQLQSARTEAQRIVSEAEDESDKLYKEALELANNEANASKEKARLEIESQTSAA 130
Query: 191 IKSLDSQIAALSEEIVRKVL 210
L Q LSE IV +++
Sbjct: 131 RDQLSKQADVLSELIVNRLI 150
>sp|A2BT28|ATPX_PROMS ATP synthase subunit b' OS=Prochlorococcus marinus (strain AS9601)
GN=atpG PE=3 SV=1
Length = 153
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 73/140 (52%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQ 130
+ LFD N TLP++ ++ + L + L+ +++ P+GN +++R+ + + K+ EVK+
Sbjct: 11 EGGLFDINATLPLMAIQVVALTYILNSLFFKPVGNVVEKREKFVSNNIIEAKNKLSEVKK 70
Query: 131 LEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDT 190
LE +++AR E +++ + E+ ++ L + + A ++A +E Q
Sbjct: 71 LEADLLTQLQSARTEAQRIVSEAENESDKLYKEALELANNEANASKEKARLEIESQTSAA 130
Query: 191 IKSLDSQIAALSEEIVRKVL 210
L Q LSE IV +++
Sbjct: 131 RDQLSKQADDLSELIVNRLI 150
>sp|Q318T8|ATPX_PROM9 ATP synthase subunit b' OS=Prochlorococcus marinus (strain MIT
9312) GN=atpG PE=3 SV=1
Length = 153
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 73/140 (52%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQ 130
+ LFD N TLP++ ++ + L + L+ +++ P+GN +++R+ + + K+ EVK+
Sbjct: 11 EGGLFDINATLPLMAIQVVALTYILNSLFFKPVGNVVEKREKFVSNNIIEAKNKLSEVKK 70
Query: 131 LEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDT 190
LE + +++AR E + + + E+ ++ L + + A ++A +E Q
Sbjct: 71 LEAELLTQLQSARTEAQRIVGEAENESDKLYKEALELANNEANASKEKARLEIESQTSAA 130
Query: 191 IKSLDSQIAALSEEIVRKVL 210
L Q LSE IV +++
Sbjct: 131 RDQLSKQADDLSELIVNRLI 150
>sp|Q46J54|ATPX_PROMT ATP synthase subunit b' OS=Prochlorococcus marinus (strain NATL2A)
GN=atpG PE=3 SV=1
Length = 153
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 78/140 (55%)
Query: 71 KAALFDFNLTLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQ 130
+ LFDF+ TLP++ V+ ++L F L+ +++ P+G ++ER++ + K EV+
Sbjct: 11 EGGLFDFDATLPLMAVQVVLLTFILNALFFKPVGRVVEEREDYVNTSRAEAKKKIAEVEL 70
Query: 131 LEEQAAAVMRAARAEISAALTKMKKETQLEVEQKLAVGRKKIEAELQEALANLERQKEDT 190
LE + ++ AR E + + +++++ ++ LA+ + A ++A ++ Q+++
Sbjct: 71 LETELKDQLKEARLEAQKVILEAEQDSENLYKEALALATSEANASREKARREIDSQRDEA 130
Query: 191 IKSLDSQIAALSEEIVRKVL 210
+ L ++ L + I+ ++L
Sbjct: 131 LNQLKNEADNLGDLIIERLL 150
>sp|B7IQW2|ATPF_BACC2 ATP synthase subunit b OS=Bacillus cereus (strain G9842) GN=atpF
PE=3 SV=1
Length = 168
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Query: 80 TLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQAAAVM 139
T+ + FL+L+ L K + PL M ER+ + ++++ + ++ E K+L E+ ++
Sbjct: 14 TIAYTLFIFLILLVMLRKFAWGPLMGIMKEREEHVTNEIDAAERSNAEAKKLVEEQREML 73
Query: 140 RAARAEISAALTKMKKETQLEVEQK---LAVGRKKIEAELQEALANLERQKEDTIKSLDS 196
+ +R E + + KK+ V+QK +A +++ E+ A+ ++R+KE I +L
Sbjct: 74 KQSRVEAQELIERAKKQA---VDQKDVIVAAAKEEAESIKASAVQEIQREKEQAIAALQE 130
Query: 197 QIAALSEEIVRKVL 210
Q+A+LS +I KV+
Sbjct: 131 QVASLSVQIASKVI 144
>sp|B7HY69|ATPF_BACC7 ATP synthase subunit b OS=Bacillus cereus (strain AH187) GN=atpF
PE=3 SV=1
Length = 168
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Query: 80 TLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQAAAVM 139
T+ + FL+L+ L K + PL M ER+ + ++++ + ++ E K+L E+ ++
Sbjct: 14 TIAYTLFIFLLLLVMLRKFAWGPLMGIMKEREEHVTNEIDAAERSNAEAKKLVEEQREML 73
Query: 140 RAARAEISAALTKMKKETQLEVEQK---LAVGRKKIEAELQEALANLERQKEDTIKSLDS 196
+ +R E + + KK+ V+QK +A +++ E+ A+ ++R+KE I +L
Sbjct: 74 KQSRVEAQELIERAKKQA---VDQKDAIVAAAKEEAESIKASAVQEIQREKEQAIAALQE 130
Query: 197 QIAALSEEIVRKVL 210
Q+A+LS +I KV+
Sbjct: 131 QVASLSVQIASKVI 144
>sp|Q72XE4|ATPF_BACC1 ATP synthase subunit b OS=Bacillus cereus (strain ATCC 10987)
GN=atpF PE=3 SV=1
Length = 168
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Query: 80 TLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQAAAVM 139
T+ + FL+L+ L K + PL M ER+ + ++++ + ++ E K+L E+ ++
Sbjct: 14 TIAYTLFIFLLLLVMLRKFAWGPLMGIMKEREEHVTNEIDAAERSNAEAKKLVEEQREML 73
Query: 140 RAARAEISAALTKMKKETQLEVEQK---LAVGRKKIEAELQEALANLERQKEDTIKSLDS 196
+ +R E + + KK+ V+QK +A +++ E+ A+ ++R+KE I +L
Sbjct: 74 KQSRVEAQELIERAKKQA---VDQKDAIVAAAKEEAESIKASAVQEIQREKEQAIAALQE 130
Query: 197 QIAALSEEIVRKVL 210
Q+A+LS +I KV+
Sbjct: 131 QVASLSVQIASKVI 144
>sp|A9VSA7|ATPF_BACWK ATP synthase subunit b OS=Bacillus weihenstephanensis (strain
KBAB4) GN=atpF PE=3 SV=1
Length = 168
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 80 TLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLEEQAAAVM 139
T+ + FL+L+ L K + PL M ER+ + ++++ + ++ E K+L E+ ++
Sbjct: 14 TIAYTLFIFLLLLVMLRKFAWGPLMGIMKEREEHVTNEIDAAERSNAEAKKLVEEQREML 73
Query: 140 RAARAEISAALTKMKKETQLEVEQK---LAVGRKKIEAELQEALANLERQKEDTIKSLDS 196
+ +R E + + KK+ V+QK +A +++ E+ A+ ++R+KE I +L
Sbjct: 74 KQSRVEAQELIERAKKQA---VDQKDVIVAAAKEEAESIKTSAVQEIQREKEQAIAALQE 130
Query: 197 QIAALSEEIVRKVL 210
Q+A+LS I KV+
Sbjct: 131 QVASLSVHIASKVI 144
>sp|B2A3G6|ATPF_NATTJ ATP synthase subunit b OS=Natranaerobius thermophilus (strain ATCC
BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=atpF PE=3 SV=1
Length = 162
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 74 LFDFNL-TLPIIMVEFLVLMFALDKIYYSPLGNFMDERDNAIKEKLNSVKDTSEEVKQLE 132
+ D NL T + +V LVL + L + + P+G FM+ R N IK+ L + +E ++L+
Sbjct: 1 MVDPNLVTFVLTIVNILVLFYLLKRFLFKPIGEFMENRKNEIKQNLEDAEKERQEAEKLK 60
Query: 133 EQAAAVMRAARAE----ISAA-------LTKMKKETQLEVEQKLAVGRKKIEAELQEALA 181
EQ +R A++E I A + + K+E + E + +A R++I E ++A
Sbjct: 61 EQYYEKLRGAKSEAQEIIQQARQREEEIIKEAKQEAKQEADDMIARAREEINQEQKKA-- 118
Query: 182 NLERQKEDTIKSLDSQIAALSEEIVRKVL 210
I+SL S+++ L+ +I +VL
Sbjct: 119 ---------IESLRSEVSDLTIQITERVL 138
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.126 0.318
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,597,292
Number of Sequences: 539616
Number of extensions: 2228934
Number of successful extensions: 16986
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 782
Number of HSP's that attempted gapping in prelim test: 15345
Number of HSP's gapped (non-prelim): 2210
length of query: 213
length of database: 191,569,459
effective HSP length: 113
effective length of query: 100
effective length of database: 130,592,851
effective search space: 13059285100
effective search space used: 13059285100
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)