Query         028134
Match_columns 213
No_of_seqs    140 out of 1593
Neff          10.2
Searched_HMMs 46136
Date          Fri Mar 29 06:47:06 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028134.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028134hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0581 Mitogen-activated prot 100.0 1.8E-34   4E-39  222.9  10.2  151    2-171   182-334 (364)
  2 KOG0192 Tyrosine kinase specif 100.0 1.1E-33 2.4E-38  226.3  14.0  162    1-182   145-309 (362)
  3 KOG1187 Serine/threonine prote 100.0 1.2E-32 2.7E-37  221.2  13.8  176    1-179   177-355 (361)
  4 KOG0197 Tyrosine kinases [Sign 100.0 8.8E-33 1.9E-37  222.1  10.1  159    1-180   306-465 (468)
  5 cd05102 PTKc_VEGFR3 Catalytic  100.0 1.9E-31 4.1E-36  214.1  11.3  159    2-179   178-337 (338)
  6 KOG0593 Predicted protein kina 100.0 8.7E-32 1.9E-36  203.4   6.9  172    2-179   105-293 (396)
  7 KOG0575 Polo-like serine/threo 100.0 5.1E-31 1.1E-35  214.7   8.6  145    2-171   122-268 (592)
  8 KOG0591 NIMA (never in mitosis 100.0 1.9E-30 4.2E-35  194.4  10.7  155    2-175   128-284 (375)
  9 KOG0615 Serine/threonine prote 100.0 3.5E-31 7.5E-36  207.1   5.8  148    3-171   281-436 (475)
 10 KOG0198 MEKK and related serin 100.0 5.9E-31 1.3E-35  205.3   7.0  154    2-173   121-277 (313)
 11 cd05048 PTKc_Ror Catalytic Dom 100.0 1.8E-30   4E-35  203.2   9.6  155    2-176   128-283 (283)
 12 cd05108 PTKc_EGFR Catalytic do 100.0 4.2E-30   9E-35  204.6  11.3  163    2-184   113-276 (316)
 13 KOG1026 Nerve growth factor re 100.0 1.2E-30 2.6E-35  219.6   7.9  162    1-182   606-768 (774)
 14 cd05106 PTKc_CSF-1R Catalytic  100.0 6.4E-30 1.4E-34  207.9  10.8  157    2-177   216-373 (374)
 15 cd05054 PTKc_VEGFR Catalytic d 100.0 7.6E-30 1.6E-34  204.9  11.0  159    2-179   177-336 (337)
 16 KOG0598 Ribosomal protein S6 k 100.0 2.6E-30 5.7E-35  199.8   7.6  147    3-171   130-280 (357)
 17 cd05100 PTKc_FGFR3 Catalytic d 100.0   2E-29 4.2E-34  202.2  12.6  161    2-182   138-299 (334)
 18 cd05111 PTK_HER3 Pseudokinase  100.0 1.4E-29   3E-34  198.2  11.4  159    2-180   113-272 (279)
 19 cd05094 PTKc_TrkC Catalytic do 100.0 1.5E-29 3.2E-34  199.1  10.7  158    2-179   127-285 (291)
 20 cd05091 PTKc_Ror2 Catalytic do 100.0 6.4E-30 1.4E-34  200.2   8.6  154    2-175   128-282 (283)
 21 cd05053 PTKc_FGFR Catalytic do 100.0 1.6E-29 3.5E-34  198.9  10.7  157    2-178   136-293 (293)
 22 KOG1989 ARK protein kinase fam 100.0 2.7E-29 5.8E-34  212.0  12.2  161    1-182   147-317 (738)
 23 KOG0193 Serine/threonine prote 100.0 7.2E-30 1.6E-34  207.9   8.4  163    1-179   491-656 (678)
 24 cd05104 PTKc_Kit Catalytic dom 100.0 1.8E-29 3.9E-34  205.4  10.4  156    2-176   218-374 (375)
 25 PHA02988 hypothetical protein; 100.0 2.1E-29 4.5E-34  197.7  10.3  153    2-178   126-281 (283)
 26 KOG0661 MAPK related serine/th 100.0 5.7E-30 1.2E-34  203.4   6.9  164    2-172   114-291 (538)
 27 cd05093 PTKc_TrkB Catalytic do 100.0 2.2E-29 4.8E-34  197.9  10.2  159    2-180   124-283 (288)
 28 cd05045 PTKc_RET Catalytic dom 100.0   2E-29 4.4E-34  198.2   9.8  158    2-179   131-289 (290)
 29 cd05035 PTKc_Axl_like Catalyti 100.0 3.7E-29 7.9E-34  194.7  11.0  155    2-176   117-272 (273)
 30 KOG0578 p21-activated serine/t 100.0   4E-29 8.6E-34  202.2  11.0  149    2-171   373-522 (550)
 31 KOG0592 3-phosphoinositide-dep 100.0 1.2E-29 2.5E-34  204.4   7.8  149    3-172   179-338 (604)
 32 KOG0660 Mitogen-activated prot 100.0 1.6E-29 3.4E-34  195.0   8.2  177    3-183   130-323 (359)
 33 cd05075 PTKc_Axl Catalytic dom 100.0 2.6E-29 5.6E-34  195.6   9.4  155    2-176   116-271 (272)
 34 cd05109 PTKc_HER2 Catalytic do 100.0 3.2E-29 6.9E-34  196.0  10.0  159    2-180   113-272 (279)
 35 KOG4721 Serine/threonine prote 100.0 8.1E-30 1.7E-34  206.8   6.6  154    2-177   216-369 (904)
 36 KOG0583 Serine/threonine prote 100.0 2.9E-29 6.3E-34  202.2   9.6  152    2-177   124-279 (370)
 37 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.4E-29 1.2E-33  197.1  10.7  158    2-179   141-299 (304)
 38 cd05052 PTKc_Abl Catalytic dom 100.0 6.2E-29 1.3E-33  192.8  10.6  154    2-176   108-262 (263)
 39 KOG0659 Cdk activating kinase  100.0 3.5E-29 7.6E-34  186.1   8.0  165    2-172   105-281 (318)
 40 cd05043 PTK_Ryk Pseudokinase d 100.0 6.6E-29 1.4E-33  194.2   9.9  158    2-179   121-279 (280)
 41 cd05049 PTKc_Trk Catalytic dom 100.0 7.3E-29 1.6E-33  193.8  10.0  153    2-174   126-279 (280)
 42 cd05096 PTKc_DDR1 Catalytic do 100.0 5.9E-29 1.3E-33  196.8   9.6  160    2-174   142-303 (304)
 43 cd05116 PTKc_Syk Catalytic dom 100.0 7.3E-29 1.6E-33  191.8   9.7  154    2-175    99-254 (257)
 44 cd05090 PTKc_Ror1 Catalytic do 100.0 6.4E-29 1.4E-33  194.7   9.4  154    2-175   128-282 (283)
 45 cd05092 PTKc_TrkA Catalytic do 100.0   6E-29 1.3E-33  194.6   8.9  154    2-175   126-280 (280)
 46 cd05098 PTKc_FGFR1 Catalytic d 100.0 8.7E-29 1.9E-33  196.2   9.5  160    2-181   144-304 (307)
 47 PTZ00283 serine/threonine prot 100.0 7.7E-29 1.7E-33  208.0   9.6  150    2-171   147-296 (496)
 48 cd05110 PTKc_HER4 Catalytic do 100.0 1.8E-28   4E-33  194.0  10.9  161    2-182   113-274 (303)
 49 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.3E-28   5E-33  191.5  11.3  171    2-177   111-282 (283)
 50 KOG0588 Serine/threonine prote 100.0 8.1E-29 1.8E-33  203.6   8.8  144    2-171   116-262 (786)
 51 KOG0201 Serine/threonine prote 100.0 6.9E-29 1.5E-33  195.5   8.0  147    3-171   116-262 (467)
 52 cd05036 PTKc_ALK_LTK Catalytic 100.0 9.5E-29 2.1E-33  193.2   8.9  153    2-174   120-276 (277)
 53 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.3E-28 4.9E-33  194.4  11.2  159    2-180   138-297 (314)
 54 cd05060 PTKc_Syk_like Catalyti 100.0 1.6E-28 3.5E-33  189.8   9.9  156    2-177    99-256 (257)
 55 cd05062 PTKc_IGF-1R Catalytic  100.0 8.4E-29 1.8E-33  193.4   8.4  153    2-174   123-276 (277)
 56 cd05032 PTKc_InsR_like Catalyt 100.0 1.2E-28 2.6E-33  192.3   9.2  153    2-174   123-276 (277)
 57 KOG0658 Glycogen synthase kina 100.0 9.5E-29 2.1E-33  191.0   8.3  176    3-185   130-321 (364)
 58 KOG1095 Protein tyrosine kinas 100.0 1.1E-28 2.3E-33  214.3   9.6  162    1-182   805-967 (1025)
 59 cd05089 PTKc_Tie1 Catalytic do 100.0   2E-28 4.2E-33  193.3  10.3  157    2-181   123-280 (297)
 60 PF07714 Pkinase_Tyr:  Protein  100.0 2.6E-29 5.6E-34  194.7   5.0  152    2-173   107-259 (259)
 61 cd05631 STKc_GRK4 Catalytic do 100.0 3.1E-28 6.8E-33  191.1  11.1  150    2-171   106-260 (285)
 62 cd05115 PTKc_Zap-70 Catalytic  100.0 2.3E-28   5E-33  189.2  10.1  155    2-176    99-255 (257)
 63 cd05082 PTKc_Csk Catalytic dom 100.0 1.8E-28 3.8E-33  189.4   9.4  150    2-176   106-256 (256)
 64 cd05033 PTKc_EphR Catalytic do 100.0 2.8E-28   6E-33  189.4  10.5  155    2-176   110-265 (266)
 65 cd05084 PTKc_Fes Catalytic dom 100.0 1.9E-28 4.1E-33  188.8   9.4  153    2-174    98-251 (252)
 66 PHA02882 putative serine/threo 100.0   2E-28 4.3E-33  193.1   9.5  159    2-173   130-293 (294)
 67 cd07862 STKc_CDK6 Catalytic do 100.0 6.9E-29 1.5E-33  195.0   6.8  162    2-171   114-286 (290)
 68 KOG0596 Dual specificity; seri 100.0 1.6E-28 3.4E-33  198.4   8.8  150    3-171   465-626 (677)
 69 KOG0600 Cdc2-related protein k 100.0 6.4E-29 1.4E-33  198.7   6.4  164    2-171   222-399 (560)
 70 cd05072 PTKc_Lyn Catalytic dom 100.0 2.7E-28 5.9E-33  188.9   9.6  154    2-176   107-261 (261)
 71 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.5E-28 5.5E-33  188.9   9.4  153    2-176   108-261 (261)
 72 KOG2345 Serine/threonine prote 100.0   3E-28 6.5E-33  179.6   9.2  162    1-177   130-301 (302)
 73 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.3E-28 7.2E-33  199.2  10.4  158    2-178   241-399 (400)
 74 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-28 3.1E-33  189.7   7.5  170    2-177   124-309 (323)
 75 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.3E-28 7.1E-33  189.1   9.5  154    2-176   111-265 (266)
 76 cd05571 STKc_PKB Catalytic dom 100.0 2.3E-28 4.9E-33  195.2   8.8  147    2-171    99-250 (323)
 77 cd05103 PTKc_VEGFR2 Catalytic  100.0 5.7E-28 1.2E-32  194.4  10.9  159    2-179   183-342 (343)
 78 cd05058 PTKc_Met_Ron Catalytic 100.0 4.7E-28   1E-32  187.5  10.0  157    2-178   102-261 (262)
 79 cd05068 PTKc_Frk_like Catalyti 100.0 5.5E-28 1.2E-32  187.2  10.4  154    2-176   107-261 (261)
 80 cd05047 PTKc_Tie Catalytic dom 100.0 4.5E-28 9.8E-33  188.7  10.0  153    2-177   116-269 (270)
 81 PTZ00267 NIMA-related protein  100.0 3.5E-28 7.6E-33  203.5  10.0  150    2-171   173-322 (478)
 82 cd05044 PTKc_c-ros Catalytic d 100.0 6.1E-28 1.3E-32  187.6  10.6  153    2-174   110-268 (269)
 83 cd00192 PTKc Catalytic domain  100.0 5.4E-28 1.2E-32  186.6  10.0  153    2-174   109-262 (262)
 84 KOG0582 Ste20-like serine/thre 100.0 4.6E-28   1E-32  191.3   9.6  159    2-171   130-292 (516)
 85 cd05055 PTKc_PDGFR Catalytic d  99.9 4.6E-28 9.9E-33  191.7   9.6  156    2-176   145-301 (302)
 86 cd05585 STKc_YPK1_like Catalyt  99.9 2.7E-28 5.9E-33  193.8   8.2  147    2-171    97-246 (312)
 87 cd05051 PTKc_DDR Catalytic dom  99.9 6.7E-28 1.4E-32  189.9  10.3  160    2-174   134-295 (296)
 88 PLN00034 mitogen-activated pro  99.9 6.9E-28 1.5E-32  194.6  10.5  151    2-171   172-327 (353)
 89 cd05074 PTKc_Tyro3 Catalytic d  99.9 6.2E-28 1.3E-32  187.9   9.8  155    2-176   117-272 (273)
 90 cd07848 STKc_CDKL5 Catalytic d  99.9 4.4E-28 9.6E-33  190.2   9.0  166    2-171   104-283 (287)
 91 cd08228 STKc_Nek6 Catalytic do  99.9 8.3E-28 1.8E-32  186.6  10.5  156    2-177   110-266 (267)
 92 cd05050 PTKc_Musk Catalytic do  99.9 4.7E-28   1E-32  190.2   9.1  154    2-175   134-288 (288)
 93 cd05095 PTKc_DDR2 Catalytic do  99.9 8.4E-28 1.8E-32  189.6  10.5  161    2-175   134-296 (296)
 94 cd05088 PTKc_Tie2 Catalytic do  99.9 7.1E-28 1.5E-32  190.7  10.0  158    2-182   128-286 (303)
 95 cd05041 PTKc_Fes_like Catalyti  99.9 7.8E-28 1.7E-32  185.2   9.9  153    2-174    97-250 (251)
 96 cd05097 PTKc_DDR_like Catalyti  99.9 6.8E-28 1.5E-32  190.0   9.5  160    2-174   133-294 (295)
 97 cd05057 PTKc_EGFR_like Catalyt  99.9 1.3E-27 2.8E-32  186.9  11.0  158    2-179   113-271 (279)
 98 cd05070 PTKc_Fyn_Yrk Catalytic  99.9   9E-28   2E-32  185.9  10.0  153    2-175   106-259 (260)
 99 PHA03207 serine/threonine kina  99.9 5.8E-28 1.3E-32  197.6   9.4  167    2-172   189-375 (392)
100 KOG0667 Dual-specificity tyros  99.9 1.5E-27 3.2E-32  196.1  11.4  162    2-171   293-501 (586)
101 cd05061 PTKc_InsR Catalytic do  99.9 7.3E-28 1.6E-32  189.2   9.3  156    2-177   123-279 (288)
102 cd05107 PTKc_PDGFR_beta Cataly  99.9 7.9E-28 1.7E-32  196.9   9.8  157    2-177   243-400 (401)
103 cd08229 STKc_Nek7 Catalytic do  99.9   2E-27 4.4E-32  184.4  11.2  157    2-177   110-266 (267)
104 cd05069 PTKc_Yes Catalytic dom  99.9 1.3E-27 2.9E-32  185.0  10.1  153    2-175   106-259 (260)
105 cd05071 PTKc_Src Catalytic dom  99.9 1.7E-27 3.6E-32  184.8  10.6  155    2-177   106-261 (262)
106 PHA03212 serine/threonine kina  99.9   1E-27 2.2E-32  196.0   9.7  166    2-171   186-375 (391)
107 cd05114 PTKc_Tec_Rlk Catalytic  99.9 1.2E-27 2.7E-32  184.7   9.6  151    2-173   104-255 (256)
108 PTZ00284 protein kinase; Provi  99.9 5.6E-28 1.2E-32  201.9   8.2  167    2-176   235-444 (467)
109 cd07859 STKc_TDY_MAPK_plant Ca  99.9 6.6E-28 1.4E-32  193.3   8.3  167    2-171   107-289 (338)
110 cd05589 STKc_PKN Catalytic dom  99.9 1.8E-27 3.8E-32  190.2  10.7  147    2-171   105-256 (324)
111 KOG4279 Serine/threonine prote  99.9 5.5E-28 1.2E-32  200.1   7.9  149    3-171   680-831 (1226)
112 cd05063 PTKc_EphR_A2 Catalytic  99.9 1.4E-27 3.1E-32  185.5   9.9  155    2-176   111-267 (268)
113 cd05593 STKc_PKB_gamma Catalyt  99.9   1E-27 2.2E-32  191.8   9.2  148    2-172    99-251 (328)
114 cd05584 STKc_p70S6K Catalytic   99.9 2.8E-27 6.1E-32  188.9  11.7  147    2-171   104-255 (323)
115 cd05056 PTKc_FAK Catalytic dom  99.9 2.6E-27 5.6E-32  184.3  11.1  158    2-180   111-269 (270)
116 cd05059 PTKc_Tec_like Catalyti  99.9 1.1E-27 2.3E-32  185.1   8.8  151    2-173   104-255 (256)
117 cd05067 PTKc_Lck_Blk Catalytic  99.9 1.9E-27 4.2E-32  184.0   9.9  153    2-175   106-259 (260)
118 cd05614 STKc_MSK2_N N-terminal  99.9 1.6E-27 3.5E-32  190.9   9.4  152    2-171   109-266 (332)
119 cd08224 STKc_Nek6_Nek7 Catalyt  99.9 5.3E-27 1.1E-31  181.9  12.0  156    2-177   110-266 (267)
120 cd05592 STKc_nPKC_theta_delta   99.9   7E-27 1.5E-31  186.1  12.9  147    2-171   100-247 (316)
121 cd05039 PTKc_Csk_like Catalyti  99.9 1.8E-27   4E-32  183.7   9.2  150    2-176   106-256 (256)
122 cd05113 PTKc_Btk_Bmx Catalytic  99.9 1.7E-27 3.7E-32  184.1   8.9  152    2-174   104-256 (256)
123 cd07863 STKc_CDK4 Catalytic do  99.9 1.8E-27   4E-32  186.7   9.2  162    2-171   112-284 (288)
124 KOG0599 Phosphorylase kinase g  99.9 8.6E-28 1.9E-32  179.8   6.8  147    2-171   127-282 (411)
125 KOG0694 Serine/threonine prote  99.9 1.1E-27 2.4E-32  197.6   8.2  158    3-183   473-642 (694)
126 cd07871 STKc_PCTAIRE3 Catalyti  99.9 7.1E-28 1.5E-32  189.4   6.8  165    2-171   107-284 (288)
127 PTZ00263 protein kinase A cata  99.9   6E-27 1.3E-31  187.5  12.2  144    2-171   122-270 (329)
128 cd05040 PTKc_Ack_like Catalyti  99.9   3E-27 6.4E-32  182.5   9.9  154    2-174   101-256 (257)
129 cd05083 PTKc_Chk Catalytic dom  99.9 2.6E-27 5.7E-32  182.7   9.4  149    2-175   104-253 (254)
130 cd05087 PTKc_Aatyk1_Aatyk3 Cat  99.9 2.5E-27 5.5E-32  184.3   9.4  157    2-174   104-268 (269)
131 cd05620 STKc_nPKC_delta Cataly  99.9 1.9E-27 4.2E-32  189.3   8.9  146    2-170   100-246 (316)
132 cd06625 STKc_MEKK3_like Cataly  99.9 4.2E-27 9.1E-32  182.2  10.5  152    2-172   108-260 (263)
133 PTZ00036 glycogen synthase kin  99.9 4.9E-28 1.1E-32  200.6   5.6  169    2-178   174-359 (440)
134 cd05595 STKc_PKB_beta Catalyti  99.9 1.4E-27   3E-32  190.7   8.0  147    2-171    99-250 (323)
135 KOG0663 Protein kinase PITSLRE  99.9 1.3E-27 2.9E-32  182.9   7.4  165    3-172   182-361 (419)
136 cd07868 STKc_CDK8 Catalytic do  99.9   6E-27 1.3E-31  186.4  11.5  103    2-107   112-220 (317)
137 KOG0603 Ribosomal protein S6 k  99.9 1.8E-27 3.9E-32  195.2   8.6  143    2-171   419-562 (612)
138 cd05065 PTKc_EphR_B Catalytic   99.9   4E-27 8.8E-32  183.1  10.3  155    2-176   110-268 (269)
139 PHA03209 serine/threonine kina  99.9 5.3E-27 1.2E-31  189.8  11.2   96    2-103   161-256 (357)
140 cd08529 STKc_FA2-like Catalyti  99.9 4.3E-27 9.4E-32  181.4  10.2  148    2-171   105-252 (256)
141 cd05081 PTKc_Jak2_Jak3_rpt2 Ca  99.9   3E-27 6.6E-32  185.2   9.5  171    2-176   112-283 (284)
142 cd07876 STKc_JNK2 Catalytic do  99.9 4.2E-27 9.1E-32  190.5  10.5  164    2-171   127-314 (359)
143 KOG4278 Protein tyrosine kinas  99.9 1.6E-27 3.4E-32  195.4   8.0  161    1-182   368-529 (1157)
144 cd05575 STKc_SGK Catalytic dom  99.9 4.2E-27 9.2E-32  187.9  10.4  143    2-167   100-242 (323)
145 cd05079 PTKc_Jak1_rpt2 Catalyt  99.9 4.9E-27 1.1E-31  184.1  10.5  170    2-176   113-283 (284)
146 cd07874 STKc_JNK3 Catalytic do  99.9   2E-27 4.2E-32  192.1   8.5  165    2-172   123-311 (355)
147 cd05073 PTKc_Hck Catalytic dom  99.9 5.3E-27 1.1E-31  181.7  10.5  153    2-175   106-259 (260)
148 cd05618 STKc_aPKC_iota Catalyt  99.9 3.9E-27 8.6E-32  188.6  10.1  155    2-171   100-261 (329)
149 cd07875 STKc_JNK1 Catalytic do  99.9 1.7E-27 3.8E-32  193.1   8.2  164    2-171   130-317 (364)
150 cd05590 STKc_nPKC_eta Catalyti  99.9 1.9E-27 4.2E-32  189.6   8.3  142    2-166   100-241 (320)
151 cd05591 STKc_nPKC_epsilon Cata  99.9 2.3E-27   5E-32  189.3   8.6  147    2-171   100-253 (321)
152 PHA03211 serine/threonine kina  99.9 4.5E-27 9.8E-32  195.1  10.4  167    2-171   264-454 (461)
153 cd06649 PKc_MEK2 Catalytic dom  99.9   4E-27 8.8E-32  188.6   9.8  164    2-172   107-301 (331)
154 cd05603 STKc_SGK2 Catalytic do  99.9 4.4E-27 9.5E-32  187.6   9.8  143    2-167   100-242 (321)
155 cd05600 STKc_Sid2p_Dbf2p Catal  99.9 2.9E-27 6.4E-32  189.5   8.8  153    2-172   105-257 (333)
156 cd07869 STKc_PFTAIRE1 Catalyti  99.9 3.2E-27 6.9E-32  186.9   8.9  163    2-171   107-287 (303)
157 KOG0589 Serine/threonine prote  99.9 3.2E-27 6.9E-32  189.3   8.8  149    2-172   110-258 (426)
158 cd05594 STKc_PKB_alpha Catalyt  99.9 1.5E-27 3.2E-32  190.7   6.8  147    2-171    99-251 (325)
159 cd05607 STKc_GRK7 Catalytic do  99.9 3.6E-27 7.8E-32  184.4   8.9  151    2-171    99-249 (277)
160 cd05085 PTKc_Fer Catalytic dom  99.9 4.9E-27 1.1E-31  180.6   9.4  152    2-174    97-249 (250)
161 cd08219 STKc_Nek3 Catalytic do  99.9 2.7E-27   6E-32  182.6   8.0  149    2-172   104-252 (255)
162 cd05042 PTKc_Aatyk Catalytic d  99.9 2.5E-27 5.5E-32  184.3   7.8  157    2-174   104-268 (269)
163 cd05612 STKc_PRKX_like Catalyt  99.9 2.1E-27 4.5E-32  187.0   7.4  144    2-171   105-253 (291)
164 cd05034 PTKc_Src_like Catalyti  99.9 3.8E-27 8.3E-32  182.3   8.6  153    2-175   107-260 (261)
165 KOG0616 cAMP-dependent protein  99.9 1.7E-27 3.6E-32  179.6   6.3  135    3-163   149-283 (355)
166 cd05570 STKc_PKC Catalytic dom  99.9   3E-27 6.5E-32  188.4   8.1  147    2-171   100-251 (318)
167 cd05587 STKc_cPKC Catalytic do  99.9 3.8E-27 8.2E-32  188.2   8.7  142    2-166   105-246 (324)
168 cd05573 STKc_ROCK_NDR_like Cat  99.9 3.9E-27 8.5E-32  189.9   8.8  151    2-172   105-285 (350)
169 cd05608 STKc_GRK1 Catalytic do  99.9 4.8E-27 1.1E-31  183.9   9.1  151    2-171   101-256 (280)
170 cd05619 STKc_nPKC_theta Cataly  99.9 4.4E-27 9.5E-32  187.3   8.9  147    2-171   100-247 (316)
171 cd05588 STKc_aPKC Catalytic do  99.9 6.9E-27 1.5E-31  187.1  10.0  154    2-171   100-261 (329)
172 cd05038 PTKc_Jak_rpt2 Catalyti  99.9 5.1E-27 1.1E-31  183.6   9.0  170    2-176   113-283 (284)
173 cd05616 STKc_cPKC_beta Catalyt  99.9 4.1E-27   9E-32  187.9   8.5  147    2-171   105-256 (323)
174 KOG0983 Mitogen-activated prot  99.9 6.9E-27 1.5E-31  174.9   8.9  149    2-171   195-348 (391)
175 cd05602 STKc_SGK1 Catalytic do  99.9 2.1E-27 4.6E-32  189.7   6.5  146    2-170   100-245 (325)
176 cd05617 STKc_aPKC_zeta Catalyt  99.9 8.5E-27 1.8E-31  186.5   9.8  149    2-166   100-248 (327)
177 cd08223 STKc_Nek4 Catalytic do  99.9 1.1E-26 2.3E-31  179.4  10.0  148    2-171   106-253 (257)
178 KOG0585 Ca2+/calmodulin-depend  99.9 4.3E-27 9.2E-32  187.2   7.7  152    2-172   214-372 (576)
179 cd05066 PTKc_EphR_A Catalytic   99.9   1E-26 2.3E-31  180.7   9.8  155    2-176   110-266 (267)
180 KOG0584 Serine/threonine prote  99.9 2.8E-27   6E-32  193.6   6.7  147    2-171   147-295 (632)
181 cd07878 STKc_p38beta_MAPK11 Ca  99.9 8.4E-27 1.8E-31  187.6   9.4  162    2-171   122-297 (343)
182 cd07867 STKc_CDC2L6 Catalytic   99.9 9.4E-27   2E-31  185.1   9.5  102    2-106   112-219 (317)
183 cd05582 STKc_RSK_N N-terminal   99.9 1.1E-27 2.5E-32  190.8   4.2  144    2-168   102-245 (318)
184 cd05086 PTKc_Aatyk2 Catalytic   99.9 1.2E-26 2.6E-31  180.6   9.8  157    2-174   103-267 (268)
185 cd06619 PKc_MKK5 Catalytic dom  99.9 1.4E-26 3.1E-31  181.1  10.3  155    2-172    99-253 (279)
186 smart00219 TyrKc Tyrosine kina  99.9 1.3E-26 2.9E-31  178.6   9.8  151    2-173   107-258 (258)
187 cd06637 STKc_TNIK Catalytic do  99.9 8.9E-27 1.9E-31  181.3   8.9  149    2-171   115-268 (272)
188 cd05112 PTKc_Itk Catalytic dom  99.9 8.2E-27 1.8E-31  180.0   8.5  152    2-174   104-256 (256)
189 PHA03210 serine/threonine kina  99.9 1.3E-26 2.9E-31  194.9  10.3  166    2-171   271-453 (501)
190 KOG0196 Tyrosine kinase, EPH (  99.9 2.5E-27 5.5E-32  197.8   5.8  165    2-186   735-901 (996)
191 cd05586 STKc_Sck1_like Catalyt  99.9 3.4E-27 7.4E-32  188.9   6.2  148    2-171   100-252 (330)
192 cd06654 STKc_PAK1 Catalytic do  99.9 1.4E-26 3.1E-31  182.7   9.5  150    2-171   120-269 (296)
193 KOG0033 Ca2+/calmodulin-depend  99.9 9.5E-27 2.1E-31  171.8   7.8  146    3-171   115-266 (355)
194 KOG0671 LAMMER dual specificit  99.9 2.6E-27 5.6E-32  183.8   5.0  162    2-171   196-405 (415)
195 KOG4645 MAPKKK (MAP kinase kin  99.9 3.1E-27 6.6E-32  206.0   5.8  150    3-171  1339-1493(1509)
196 cd05604 STKc_SGK3 Catalytic do  99.9 3.4E-27 7.3E-32  188.6   5.6  144    2-168   100-243 (325)
197 KOG0597 Serine-threonine prote  99.9 7.4E-27 1.6E-31  189.5   7.5  145    2-171   104-250 (808)
198 KOG0200 Fibroblast/platelet-de  99.9 1.6E-26 3.5E-31  197.7  10.0  159    1-178   421-581 (609)
199 cd05596 STKc_ROCK Catalytic do  99.9 2.2E-26 4.8E-31  187.0  10.3  151    2-172   146-304 (370)
200 KOG4257 Focal adhesion tyrosin  99.9 8.2E-27 1.8E-31  191.0   7.7  156    2-178   495-651 (974)
201 cd06650 PKc_MEK1 Catalytic dom  99.9 1.7E-26 3.8E-31  185.1   9.3  163    2-171   107-298 (333)
202 cd07853 STKc_NLK Catalytic dom  99.9 9.7E-27 2.1E-31  189.2   7.9  166    2-171   107-287 (372)
203 KOG0595 Serine/threonine-prote  99.9 2.5E-26 5.4E-31  179.8   9.7   98    2-105   113-216 (429)
204 KOG0194 Protein tyrosine kinas  99.9 6.4E-27 1.4E-31  190.6   6.6  161    1-182   265-426 (474)
205 cd05605 STKc_GRK4_like Catalyt  99.9 2.2E-26 4.8E-31  180.7   9.3  150    2-171   106-260 (285)
206 cd06628 STKc_MAPKKK_Byr2_like   99.9 2.9E-26 6.2E-31  178.0   9.8  150    2-171   110-263 (267)
207 cd05601 STKc_CRIK Catalytic do  99.9 1.9E-26 4.1E-31  184.6   9.0  149    2-171   106-262 (330)
208 cd06643 STKc_SLK Catalytic dom  99.9 3.4E-26 7.3E-31  179.2  10.2  149    2-171   107-261 (282)
209 PTZ00426 cAMP-dependent protei  99.9 1.2E-26 2.5E-31  186.6   7.7  144    2-171   135-283 (340)
210 cd06651 STKc_MEKK3 Catalytic d  99.9 3.6E-26 7.8E-31  177.6  10.0  150    2-171   110-260 (266)
211 cd08217 STKc_Nek2 Catalytic do  99.9 3.5E-26 7.6E-31  176.8   9.9  148    2-171   109-261 (265)
212 cd05630 STKc_GRK6 Catalytic do  99.9 2.4E-26 5.1E-31  180.5   9.0  150    2-171   106-260 (285)
213 KOG4717 Serine/threonine prote  99.9 3.2E-26 6.8E-31  184.3   9.5  146    2-171   122-269 (864)
214 cd06609 STKc_MST3_like Catalyt  99.9 2.9E-26 6.4E-31  178.7   9.2  148    2-171   102-250 (274)
215 cd06636 STKc_MAP4K4_6 Catalyti  99.9 2.8E-26 6.1E-31  179.5   8.9  149    2-171   125-278 (282)
216 cd05077 PTK_Jak1_rpt1 Pseudoki  99.9 5.8E-26 1.2E-30  176.2  10.4  144    2-173   109-261 (262)
217 PF00069 Pkinase:  Protein kina  99.9 1.7E-26 3.7E-31  178.3   7.4  154    2-171   102-256 (260)
218 cd08528 STKc_Nek10 Catalytic d  99.9 4.7E-26   1E-30  177.1   9.7  151    2-174   117-268 (269)
219 cd06642 STKc_STK25-YSK1 Cataly  99.9 5.5E-26 1.2E-30  177.5  10.2  148    2-171   105-252 (277)
220 cd05615 STKc_cPKC_alpha Cataly  99.9 3.4E-26 7.4E-31  182.7   8.9  142    2-166   105-246 (323)
221 cd06616 PKc_MKK4 Catalytic dom  99.9 2.6E-26 5.7E-31  180.2   8.0  149    2-171   111-266 (288)
222 cd07872 STKc_PCTAIRE2 Catalyti  99.9 1.4E-26 3.1E-31  183.6   6.6  165    2-171   108-285 (309)
223 cd06612 STKc_MST1_2 Catalytic   99.9 5.1E-26 1.1E-30  175.4   9.4  149    2-171   103-252 (256)
224 KOG0199 ACK and related non-re  99.9 5.6E-26 1.2E-30  188.1  10.1  152    2-173   216-369 (1039)
225 cd06658 STKc_PAK5 Catalytic do  99.9 3.5E-26 7.7E-31  180.1   8.5  150    2-171   122-271 (292)
226 cd06640 STKc_MST4 Catalytic do  99.9 9.6E-26 2.1E-30  176.2  10.8  149    2-172   105-253 (277)
227 cd08218 STKc_Nek1 Catalytic do  99.9 5.3E-26 1.1E-30  175.5   9.2  148    2-171   105-252 (256)
228 cd06655 STKc_PAK2 Catalytic do  99.9 4.8E-26   1E-30  179.7   9.1  149    2-171   119-268 (296)
229 cd07861 STKc_CDK1_euk Catalyti  99.9 3.9E-26 8.4E-31  178.9   8.4  165    2-171   105-281 (285)
230 KOG1024 Receptor-like protein   99.9   4E-26 8.6E-31  178.2   8.3  159    2-180   400-559 (563)
231 cd07839 STKc_CDK5 Catalytic do  99.9   4E-26 8.8E-31  178.7   8.3  163    2-171   103-280 (284)
232 cd05037 PTK_Jak_rpt1 Pseudokin  99.9 8.2E-26 1.8E-30  174.5   9.8  144    2-173   105-258 (259)
233 cd05632 STKc_GRK5 Catalytic do  99.9 9.5E-26 2.1E-30  177.1  10.2  150    2-171   106-260 (285)
234 cd05078 PTK_Jak2_Jak3_rpt1 Pse  99.9   6E-26 1.3E-30  175.6   8.8  144    2-173   104-257 (258)
235 cd05046 PTK_CCK4 Pseudokinase   99.9 7.2E-26 1.6E-30  176.5   9.3  153    2-174   121-274 (275)
236 cd08221 STKc_Nek9 Catalytic do  99.9 7.9E-26 1.7E-30  174.5   9.2  149    2-172   105-253 (256)
237 cd05621 STKc_ROCK2 Catalytic d  99.9 1.2E-25 2.5E-30  182.7  10.6  151    2-172   146-304 (370)
238 cd07833 STKc_CDKL Catalytic do  99.9 5.2E-26 1.1E-30  178.3   8.3  166    2-171   104-284 (288)
239 cd06605 PKc_MAPKK Catalytic do  99.9 9.1E-26   2E-30  174.9   9.4  151    2-171   104-256 (265)
240 smart00750 KIND kinase non-cat  99.9 2.1E-25 4.6E-30  163.0  10.8  150    2-179    21-172 (176)
241 cd06624 STKc_ASK Catalytic dom  99.9 1.2E-25 2.7E-30  174.7  10.0  150    2-171   112-264 (268)
242 cd06617 PKc_MKK3_6 Catalytic d  99.9 1.2E-25 2.6E-30  175.9   9.9  148    2-171   107-260 (283)
243 KOG0605 NDR and related serine  99.9 7.6E-26 1.6E-30  182.3   8.9  149    3-170   246-443 (550)
244 cd07850 STKc_JNK Catalytic dom  99.9 7.3E-26 1.6E-30  182.8   8.6  164    2-171   122-310 (353)
245 cd06610 STKc_OSR1_SPAK Catalyt  99.9 1.6E-25 3.4E-30  173.6  10.2  154    2-171   106-263 (267)
246 cd06648 STKc_PAK_II Catalytic   99.9   9E-26   2E-30  177.2   8.9  150    2-171   119-268 (285)
247 cd06644 STKc_STK10_LOK Catalyt  99.9   2E-25 4.3E-30  175.7  10.8  149    2-171   114-268 (292)
248 cd06613 STKc_MAP4K3_like Catal  99.9 1.5E-25 3.3E-30  173.3  10.0  152    2-171   105-259 (262)
249 cd06656 STKc_PAK3 Catalytic do  99.9 7.8E-26 1.7E-30  178.6   8.4  149    2-171   119-268 (297)
250 KOG1094 Discoidin domain recep  99.9   5E-26 1.1E-30  185.1   7.3  164    1-177   640-805 (807)
251 cd07873 STKc_PCTAIRE1 Catalyti  99.9 4.5E-26 9.6E-31  180.2   6.9  162    2-171   108-285 (301)
252 cd05599 STKc_NDR_like Catalyti  99.9 1.2E-25 2.6E-30  182.2   9.4  150    2-171   105-295 (364)
253 cd06646 STKc_MAP4K5 Catalytic   99.9 6.8E-26 1.5E-30  176.0   7.5  153    2-172   110-265 (267)
254 cd08530 STKc_CNK2-like Catalyt  99.9   2E-25 4.4E-30  171.9  10.0  146    2-171   107-252 (256)
255 cd05626 STKc_LATS2 Catalytic d  99.9 2.2E-25 4.8E-30  181.8  10.7  151    2-171   105-304 (381)
256 PRK13184 pknD serine/threonine  99.9 1.7E-25 3.6E-30  195.1  10.2  162    2-181   117-295 (932)
257 cd05628 STKc_NDR1 Catalytic do  99.9 5.3E-25 1.1E-29  178.5  12.5  152    2-172   105-293 (363)
258 cd05572 STKc_cGK_PKG Catalytic  99.9 2.3E-25 4.9E-30  172.6   9.9  150    2-171    97-251 (262)
259 cd06659 STKc_PAK6 Catalytic do  99.9 1.5E-25 3.3E-30  177.0   9.1  151    2-172   121-271 (297)
260 cd08220 STKc_Nek8 Catalytic do  99.9 1.9E-25 4.1E-30  172.2   9.4  147    2-171   105-252 (256)
261 cd06608 STKc_myosinIII_like Ca  99.9   2E-25 4.3E-30  173.6   9.5  149    2-171   117-271 (275)
262 cd06652 STKc_MEKK2 Catalytic d  99.9 2.8E-25 6.1E-30  172.4  10.4  150    2-171   110-260 (265)
263 cd05629 STKc_NDR_like_fungal C  99.9   4E-25 8.6E-30  180.1  11.5  151    2-172   105-305 (377)
264 PLN00113 leucine-rich repeat r  99.9 9.8E-25 2.1E-29  196.6  15.1  172    2-182   784-957 (968)
265 cd05623 STKc_MRCK_alpha Cataly  99.9 3.8E-25 8.1E-30  177.3  11.0  151    2-172   106-266 (332)
266 cd06630 STKc_MEKK1 Catalytic d  99.9 4.1E-25   9E-30  171.5  10.9  154    2-171   107-263 (268)
267 cd05574 STKc_phototropin_like   99.9 1.9E-25 4.1E-30  177.7   9.1  151    2-171   107-288 (316)
268 cd05622 STKc_ROCK1 Catalytic d  99.9 3.4E-25 7.4E-30  180.1  10.7  151    2-172   146-304 (371)
269 cd06639 STKc_myosinIIIB Cataly  99.9 3.3E-25 7.1E-30  174.3  10.2  149    2-171   132-286 (291)
270 cd05625 STKc_LATS1 Catalytic d  99.9 2.3E-25 4.9E-30  181.8   9.4  150    2-171   105-304 (382)
271 cd05633 STKc_GRK3 Catalytic do  99.9 2.3E-25 4.9E-30  174.4   9.0  149    2-172   101-255 (279)
272 cd06615 PKc_MEK Catalytic doma  99.9 3.2E-25 6.8E-30  176.0   9.9  164    2-172   103-287 (308)
273 cd06631 STKc_YSK4 Catalytic do  99.9 2.5E-25 5.5E-30  172.6   9.0  151    2-171   106-261 (265)
274 cd06645 STKc_MAP4K3 Catalytic   99.9 2.7E-25 5.9E-30  172.6   9.2  152    2-171   110-264 (267)
275 cd06638 STKc_myosinIIIA Cataly  99.9 4.6E-25   1E-29  172.9  10.4  150    2-172   128-283 (286)
276 cd06607 STKc_TAO Catalytic dom  99.9 7.3E-25 1.6E-29  173.7  11.4  146    2-172   119-267 (307)
277 cd07843 STKc_CDC2L1 Catalytic   99.9 1.5E-25 3.3E-30  176.3   7.5  165    2-171   110-289 (293)
278 cd05076 PTK_Tyk2_rpt1 Pseudoki  99.9 2.5E-25 5.4E-30  173.8   8.6  144    2-173   121-273 (274)
279 cd06629 STKc_MAPKKK_Bck1_like   99.9 6.2E-25 1.4E-29  171.0  10.8  155    2-171   112-268 (272)
280 cd08215 STKc_Nek Catalytic dom  99.9   3E-25 6.4E-30  170.9   8.9  148    2-171   107-254 (258)
281 cd06606 STKc_MAPKKK Catalytic   99.9 4.8E-25 1.1E-29  169.6   9.9  152    2-171   105-256 (260)
282 KOG3653 Transforming growth fa  99.9 1.2E-24 2.6E-29  173.1  12.2  181    2-182   311-509 (534)
283 cd05598 STKc_LATS Catalytic do  99.9 1.2E-25 2.5E-30  183.1   6.7  151    2-172   105-301 (376)
284 cd08227 PK_STRAD_alpha Pseudok  99.9 3.2E-25   7E-30  177.3   9.0  167    2-171   105-306 (327)
285 cd05122 PKc_STE Catalytic doma  99.9 5.2E-25 1.1E-29  168.8   9.7  147    2-171   102-250 (253)
286 PLN00181 protein SPA1-RELATED;  99.9 2.5E-25 5.3E-30  196.4   8.9  147    2-171    84-264 (793)
287 cd06622 PKc_MAPKK_PBS2_like Ca  99.9 8.8E-25 1.9E-29  171.4  11.0  149    2-171   106-261 (286)
288 cd06623 PKc_MAPKK_plant_like C  99.9 5.6E-25 1.2E-29  170.2   9.5  151    2-171   103-255 (264)
289 cd05579 STKc_MAST_like Catalyt  99.9 3.6E-25 7.8E-30  171.2   8.5  151    2-173    97-255 (265)
290 cd07849 STKc_ERK1_2_like Catal  99.9 1.5E-25 3.2E-30  179.9   6.3  169    2-176   110-298 (336)
291 cd05118 STKc_CMGC Catalytic do  99.9 7.6E-25 1.6E-29  171.2  10.2  162    2-171   102-279 (283)
292 cd06917 STKc_NAK1_like Catalyt  99.9 5.3E-25 1.2E-29  171.8   9.2  148    2-171   105-254 (277)
293 cd05624 STKc_MRCK_beta Catalyt  99.9 1.8E-24   4E-29  173.3  12.5  151    2-172   106-266 (331)
294 PTZ00266 NIMA-related protein   99.9 7.5E-25 1.6E-29  192.0  10.9  150    2-171   122-294 (1021)
295 cd07847 STKc_CDKL1_4 Catalytic  99.9 4.4E-25 9.6E-30  172.9   8.5  165    2-171   104-282 (286)
296 cd07831 STKc_MOK Catalytic dom  99.9 4.5E-25 9.8E-30  172.5   8.5  160    2-171   104-278 (282)
297 cd06632 STKc_MEKK1_plant Catal  99.9 4.9E-25 1.1E-29  170.0   8.6  148    2-171   106-254 (258)
298 cd06611 STKc_SLK_like Catalyti  99.9 6.1E-25 1.3E-29  171.8   9.0  149    2-171   107-261 (280)
299 cd06626 STKc_MEKK4 Catalytic d  99.9 1.2E-24 2.6E-29  168.4  10.5  151    2-171   103-260 (264)
300 cd07834 STKc_MAPK Catalytic do  99.9 3.9E-25 8.6E-30  176.8   7.9  178    2-182   107-301 (330)
301 cd07860 STKc_CDK2_3 Catalytic   99.9 3.4E-25 7.3E-30  173.5   7.4  163    2-171   104-280 (284)
302 KOG1035 eIF-2alpha kinase GCN2  99.9 4.7E-25   1E-29  191.5   8.9  149    2-171   701-870 (1351)
303 cd06618 PKc_MKK7 Catalytic dom  99.9 9.1E-25   2E-29  172.3   9.8  150    2-172   118-273 (296)
304 KOG0986 G protein-coupled rece  99.9 3.1E-25 6.6E-30  175.9   7.0  145    3-167   292-436 (591)
305 cd07842 STKc_CDK8_like Catalyt  99.9 8.1E-25 1.8E-29  173.8   9.6  167    2-171   112-312 (316)
306 cd05611 STKc_Rim15_like Cataly  99.9   5E-25 1.1E-29  170.4   8.2  148    2-172   101-248 (260)
307 cd07846 STKc_CDKL2_3 Catalytic  99.9 4.6E-25   1E-29  172.8   8.0  165    2-171   104-282 (286)
308 cd07841 STKc_CDK7 Catalytic do  99.9 1.2E-24 2.6E-29  171.6  10.4  165    2-171   106-281 (298)
309 cd07844 STKc_PCTAIRE_like Cata  99.9 5.5E-25 1.2E-29  172.9   8.3  163    2-171   107-287 (291)
310 cd08225 STKc_Nek5 Catalytic do  99.9 6.2E-25 1.4E-29  169.4   8.4  148    2-171   105-253 (257)
311 KOG0032 Ca2+/calmodulin-depend  99.9 2.2E-24 4.8E-29  174.1  11.9  148    2-171   139-292 (382)
312 cd06641 STKc_MST3 Catalytic do  99.9   1E-24 2.2E-29  170.4   9.6  149    2-172   105-253 (277)
313 cd06621 PKc_MAPKK_Pek1_like Ca  99.9 1.7E-24 3.6E-29  170.1  10.8  155    2-171   109-265 (287)
314 cd07858 STKc_TEY_MAPK_plant Ca  99.9 3.5E-25 7.5E-30  177.8   7.1  172    2-179   112-300 (337)
315 cd07857 STKc_MPK1 Catalytic do  99.9 5.9E-25 1.3E-29  176.1   8.4  164    2-171   109-291 (332)
316 cd07838 STKc_CDK4_6_like Catal  99.9   9E-25 1.9E-29  171.1   9.2  164    2-171   111-283 (287)
317 cd07865 STKc_CDK9 Catalytic do  99.9 4.2E-25 9.1E-30  174.9   7.3  167    2-171   123-306 (310)
318 cd06634 STKc_TAO2 Catalytic do  99.9 1.1E-24 2.3E-29  172.9   9.7  146    2-172   119-267 (308)
319 cd07832 STKc_CCRK Catalytic do  99.9 3.6E-25 7.8E-30  173.4   6.8  163    2-171   103-281 (286)
320 cd06635 STKc_TAO1 Catalytic do  99.9 1.6E-24 3.5E-29  172.5  10.6  149    2-175   129-280 (317)
321 cd07852 STKc_MAPK15 Catalytic   99.9 6.9E-25 1.5E-29  176.1   8.4  168    2-172   111-295 (337)
322 cd05627 STKc_NDR2 Catalytic do  99.9 3.8E-25 8.3E-30  179.1   6.9  150    2-171   105-292 (360)
323 cd06614 STKc_PAK Catalytic dom  99.9 1.5E-24 3.3E-29  170.1  10.1  149    2-171   120-269 (286)
324 cd07835 STKc_CDK1_like Catalyt  99.9 7.6E-25 1.6E-29  171.4   8.4  163    2-171   103-279 (283)
325 cd06647 STKc_PAK_I Catalytic d  99.9 1.5E-24 3.3E-29  170.9  10.1  151    2-172   119-269 (293)
326 cd05606 STKc_beta_ARK Catalyti  99.9 1.4E-24 3.1E-29  169.8   9.8  148    2-171   101-254 (278)
327 KOG0666 Cyclin C-dependent kin  99.9 3.2E-25 6.9E-30  168.7   5.8  185    2-189   136-354 (438)
328 KOG0604 MAP kinase-activated p  99.9 2.2E-24 4.8E-29  163.2  10.2  152    2-171   165-321 (400)
329 cd07855 STKc_ERK5 Catalytic do  99.9 9.1E-25   2E-29  175.2   8.7  167    2-171   111-293 (334)
330 KOG0579 Ste20-like serine/thre  99.9 5.8E-25 1.3E-29  180.8   7.5  148    3-171   135-288 (1187)
331 cd05597 STKc_DMPK_like Catalyt  99.9 4.8E-24   1E-28  170.9  12.7  151    2-172   106-266 (331)
332 cd06620 PKc_MAPKK_Byr1_like Ca  99.9 1.7E-24 3.7E-29  169.7   9.9  160    2-174   107-268 (284)
333 KOG0610 Putative serine/threon  99.9 2.7E-24 5.9E-29  168.7  10.9  150    3-171   184-391 (459)
334 cd08226 PK_STRAD_beta Pseudoki  99.9 9.1E-25   2E-29  174.8   8.4  174    2-178   105-316 (328)
335 cd08216 PK_STRAD Pseudokinase   99.9 2.7E-24 5.8E-29  170.8  11.0  165    2-171   105-294 (314)
336 cd05609 STKc_MAST Catalytic do  99.9 1.3E-24 2.8E-29  172.1   9.1  155    2-175   105-273 (305)
337 cd07840 STKc_CDK9_like Catalyt  99.9 6.8E-25 1.5E-29  171.7   7.2  165    2-171   104-283 (287)
338 cd06653 STKc_MEKK3_like_1 Cata  99.9 2.1E-24 4.5E-29  167.5   9.8  150    2-171   110-260 (264)
339 cd07837 STKc_CdkB_plant Cataly  99.9 8.2E-25 1.8E-29  172.2   7.6  162    2-171   114-290 (295)
340 cd05578 STKc_Yank1 Catalytic d  99.9   2E-24 4.2E-29  167.0   9.5  148    2-170   104-253 (258)
341 PHA03390 pk1 serine/threonine-  99.9 1.7E-24 3.6E-29  168.5   9.1  147    2-171   113-261 (267)
342 KOG0580 Serine/threonine prote  99.9 1.3E-24 2.7E-29  159.7   7.6  146    2-172   128-273 (281)
343 cd07845 STKc_CDK10 Catalytic d  99.9 1.3E-24 2.8E-29  172.4   8.4  165    2-171   112-289 (309)
344 PLN03225 Serine/threonine-prot  99.9 1.6E-24 3.5E-29  183.8   9.5  159    2-171   259-449 (566)
345 cd05577 STKc_GRK Catalytic dom  99.9 1.9E-24 4.2E-29  168.8   9.0  150    2-171    99-253 (277)
346 KOG0611 Predicted serine/threo  99.9 1.2E-24 2.6E-29  170.9   7.7  156    2-185   157-314 (668)
347 cd06627 STKc_Cdc7_like Catalyt  99.9 2.4E-24 5.1E-29  165.7   9.2  148    2-171   103-250 (254)
348 cd06633 STKc_TAO3 Catalytic do  99.9 2.8E-24   6E-29  170.9   9.7  145    2-171   125-272 (313)
349 cd07866 STKc_BUR1 Catalytic do  99.9 2.6E-24 5.7E-29  170.4   9.4  167    2-171   119-307 (311)
350 cd07870 STKc_PFTAIRE2 Catalyti  99.9 2.3E-24   5E-29  169.5   9.0  163    2-171   107-287 (291)
351 cd06657 STKc_PAK4 Catalytic do  99.9   2E-24 4.4E-29  170.2   8.6  150    2-171   120-269 (292)
352 cd05580 STKc_PKA Catalytic dom  99.9 2.5E-24 5.4E-29  169.3   9.0  144    2-171   105-253 (290)
353 KOG0577 Serine/threonine prote  99.9 2.5E-24 5.4E-29  175.8   9.0  145    2-171   130-277 (948)
354 cd07830 STKc_MAK_like Catalyti  99.9 6.3E-24 1.4E-28  166.2  11.1  164    2-171   103-279 (283)
355 cd07879 STKc_p38delta_MAPK13 C  99.9 1.5E-24 3.3E-29  174.5   7.7  169    2-178   121-305 (342)
356 cd08222 STKc_Nek11 Catalytic d  99.9 3.9E-24 8.5E-29  165.4   9.6  147    2-171   110-256 (260)
357 cd05583 STKc_MSK_N N-terminal   99.9 3.8E-24 8.3E-29  168.0   9.5  156    2-175   109-266 (288)
358 cd05576 STKc_RPK118_like Catal  99.9 2.2E-24 4.7E-29  165.0   7.7  136    2-167    89-224 (237)
359 KOG2052 Activin A type IB rece  99.9 2.7E-24 5.9E-29  170.0   8.3  168    1-180   311-507 (513)
360 cd07864 STKc_CDK12 Catalytic d  99.9 3.7E-24   8E-29  169.0   8.7  164    2-171   120-298 (302)
361 cd07836 STKc_Pho85 Catalytic d  99.9 2.9E-24 6.3E-29  168.2   7.8  163    2-171   104-280 (284)
362 cd07829 STKc_CDK_like Catalyti  99.9 7.1E-24 1.5E-28  165.6   9.5  162    2-171   102-278 (282)
363 PLN00009 cyclin-dependent kina  99.9 4.1E-24 8.8E-29  168.3   8.1  165    2-171   106-283 (294)
364 cd05123 STKc_AGC Catalytic dom  99.9 9.4E-24   2E-28  162.2   9.8  144    2-168    97-240 (250)
365 cd07851 STKc_p38 Catalytic dom  99.9 4.5E-24 9.8E-29  171.8   7.3  162    2-171   122-297 (343)
366 cd05581 STKc_PDK1 Catalytic do  99.9 7.1E-24 1.5E-28  165.4   8.2  149    2-171   106-276 (280)
367 KOG0614 cGMP-dependent protein  99.9 4.2E-24 9.1E-29  171.6   6.7  147    3-171   525-676 (732)
368 cd07877 STKc_p38alpha_MAPK14 C  99.9 1.4E-23   3E-28  169.1   9.4  162    2-172   124-300 (345)
369 PTZ00024 cyclin-dependent prot  99.9 1.2E-23 2.5E-28  168.8   8.6  164    2-171   123-312 (335)
370 cd07854 STKc_MAPK4_6 Catalytic  99.9 9.5E-24 2.1E-28  169.9   8.0  167    2-171   118-299 (342)
371 smart00220 S_TKc Serine/Threon  99.9 2.5E-23 5.5E-28  158.4   9.0  148    2-171    91-240 (244)
372 KOG0669 Cyclin T-dependent kin  99.9 7.1E-24 1.5E-28  157.3   5.6  168    2-172   128-315 (376)
373 KOG1290 Serine/threonine prote  99.9 4.2E-23   9E-28  165.0   9.7  110   62-171   410-549 (590)
374 KOG0690 Serine/threonine prote  99.9 1.7E-23 3.6E-28  160.4   7.1  145    4-171   274-423 (516)
375 cd05613 STKc_MSK1_N N-terminal  99.9 5.1E-23 1.1E-27  161.8  10.0  152    2-171   109-267 (290)
376 cd07856 STKc_Sty1_Hog1 Catalyt  99.9   3E-23 6.4E-28  166.1   8.6  161    2-172   112-288 (328)
377 KOG1025 Epidermal growth facto  99.9   3E-23 6.6E-28  174.6   8.6  159    1-179   801-960 (1177)
378 KOG1027 Serine/threonine prote  99.9 7.2E-24 1.5E-28  178.3   4.9  150    2-171   610-766 (903)
379 cd07880 STKc_p38gamma_MAPK12 C  99.9 2.5E-23 5.4E-28  167.5   7.4  167    2-178   122-306 (343)
380 KOG0664 Nemo-like MAPK-related  99.9 2.8E-23 6.1E-28  155.9   5.9  167    3-173   161-344 (449)
381 KOG0696 Serine/threonine prote  99.9 1.6E-22 3.5E-27  159.3   9.2  140    3-165   455-594 (683)
382 KOG1006 Mitogen-activated prot  99.9   8E-24 1.7E-28  157.9   1.1  148    4-171   173-326 (361)
383 KOG1151 Tousled-like protein k  99.9 3.3E-22 7.1E-27  158.9  10.2  154    2-170   572-739 (775)
384 KOG0574 STE20-like serine/thre  99.9 1.7E-23 3.6E-28  159.0   1.6  148    3-171   134-282 (502)
385 KOG0665 Jun-N-terminal kinase   99.9 2.8E-22 6.1E-27  152.9   7.5  164    2-171   122-309 (369)
386 KOG0586 Serine/threonine prote  99.9 1.2E-22 2.5E-27  166.3   5.3  146    2-171   159-305 (596)
387 KOG0612 Rho-associated, coiled  99.9 1.8E-21 3.8E-26  168.5  10.8  147    3-170   180-336 (1317)
388 KOG0984 Mitogen-activated prot  99.8 6.8E-22 1.5E-26  142.8   4.8  103    2-109   152-258 (282)
389 KOG0695 Serine/threonine prote  99.8 4.4E-21 9.5E-26  147.9   8.2  145    4-165   357-503 (593)
390 KOG0670 U4/U6-associated splic  99.8 1.7E-21 3.6E-26  157.2   5.6   97    2-105   540-637 (752)
391 KOG0662 Cyclin-dependent kinas  99.8   6E-21 1.3E-25  135.4   6.4  164    2-171   105-282 (292)
392 cd05610 STKc_MASTL Catalytic d  99.8 1.2E-20 2.7E-25  163.6   8.8   93   64-172   541-634 (669)
393 KOG4250 TANK binding protein k  99.8 1.8E-20 3.9E-25  155.8   8.8  177    2-185   124-319 (732)
394 KOG1345 Serine/threonine kinas  99.8 1.5E-20 3.2E-25  141.0   7.2  152    2-171   125-283 (378)
395 PLN03224 probable serine/threo  99.8 6.8E-20 1.5E-24  152.9  11.4  161    2-171   313-499 (507)
396 KOG4236 Serine/threonine prote  99.8 2.1E-21 4.6E-26  157.1   1.8  147    3-171   669-818 (888)
397 KOG0608 Warts/lats-like serine  99.8 6.5E-20 1.4E-24  151.2   9.8  107    3-112   734-880 (1034)
398 KOG0587 Traf2- and Nck-interac  99.8 4.2E-20 9.2E-25  156.6   8.2  148    3-171   128-281 (953)
399 KOG0607 MAP kinase-interacting  99.8 1.3E-19 2.9E-24  138.7   8.8  162    2-171   180-360 (463)
400 cd00180 PKc Catalytic domain o  99.8   4E-19 8.7E-24  132.0   8.4  117    2-172    96-214 (215)
401 KOG0668 Casein kinase II, alph  99.8   8E-19 1.7E-23  128.9   7.1  162    3-171   137-321 (338)
402 KOG0590 Checkpoint kinase and   99.8 2.9E-19 6.3E-24  152.0   5.2  158    2-171   424-584 (601)
403 PF14531 Kinase-like:  Kinase-l  99.7 3.5E-18 7.5E-23  132.2   5.4  132    2-163   149-288 (288)
404 KOG1167 Serine/threonine prote  99.7 1.7E-17 3.6E-22  130.9   7.8  167    2-171   136-380 (418)
405 KOG1023 Natriuretic peptide re  99.7 6.4E-17 1.4E-21  132.7   8.4  166    2-180    52-228 (484)
406 KOG1152 Signal transduction se  99.7 6.1E-18 1.3E-22  138.2   2.4   94    3-103   675-769 (772)
407 KOG1164 Casein kinase (serine/  99.7   1E-15 2.2E-20  122.3  11.8  166    1-182   125-303 (322)
408 KOG1033 eIF-2alpha kinase PEK/  99.7 2.7E-17 5.9E-22  133.3   2.4  142    2-169   363-509 (516)
409 KOG1240 Protein kinase contain  99.7 6.1E-17 1.3E-21  140.7   4.7  149    3-172   125-291 (1431)
410 KOG0195 Integrin-linked kinase  99.7 1.6E-16 3.5E-21  119.7   5.8  151    1-177   292-447 (448)
411 KOG4158 BRPK/PTEN-induced prot  99.6 7.2E-16 1.6E-20  121.7   8.4  152    3-173   346-511 (598)
412 smart00221 STYKc Protein kinas  99.6 4.2E-16 9.2E-21  117.4   6.8   99    2-104   102-201 (225)
413 KOG0606 Microtubule-associated  99.6 2.4E-16 5.2E-21  136.6   4.0  139    6-163   151-303 (1205)
414 KOG0576 Mitogen-activated prot  99.6 7.8E-16 1.7E-20  127.8   6.2  148    3-171   117-270 (829)
415 KOG1165 Casein kinase (serine/  99.6 4.2E-14 9.2E-19  109.3  10.4  167    2-184   128-307 (449)
416 COG0515 SPS1 Serine/threonine   99.5 4.8E-14   1E-18  111.1  10.2  158    2-172   105-275 (384)
417 KOG0603 Ribosomal protein S6 k  99.5 1.1E-14 2.5E-19  120.4   3.9  130    4-166   103-232 (612)
418 KOG1163 Casein kinase (serine/  99.4 1.2E-13 2.5E-18  102.7   5.4  161    3-179   116-287 (341)
419 PRK12274 serine/threonine prot  99.3 4.8E-12   1E-16   93.8   4.2  103    2-107    95-211 (218)
420 PRK09188 serine/threonine prot  99.3   1E-11 2.3E-16  100.0   6.2   72    2-76    115-193 (365)
421 KOG1166 Mitotic checkpoint ser  99.2   3E-11 6.6E-16  106.4   9.4   99    1-102   797-902 (974)
422 KOG0590 Checkpoint kinase and   99.2   4E-12 8.6E-17  108.7   1.6  153    3-171   128-285 (601)
423 KOG1266 Protein kinase [Signal  99.1   3E-11 6.5E-16   93.7   3.8   99    2-101   180-280 (458)
424 PRK10359 lipopolysaccharide co  99.1 4.1E-11 8.9E-16   90.4   2.1   77    3-97    140-216 (232)
425 COG4248 Uncharacterized protei  99.1 2.7E-09 5.8E-14   85.8  11.8  175    1-182   120-306 (637)
426 cd05145 RIO1_like RIO kinase f  99.0 5.2E-10 1.1E-14   82.8   4.3   46    2-51    121-167 (190)
427 cd05147 RIO1_euk RIO kinase fa  99.0   4E-10 8.6E-15   83.4   3.3   45    2-50    121-166 (190)
428 KOG2137 Protein kinase [Signal  98.9 6.1E-10 1.3E-14   93.9   3.5  150    6-171   107-264 (700)
429 PRK01723 3-deoxy-D-manno-octul  98.7 1.3E-08 2.7E-13   78.0   4.3   45    3-50    147-191 (239)
430 cd05144 RIO2_C RIO kinase fami  98.7 2.1E-08 4.5E-13   74.6   4.4   46    2-50    129-174 (198)
431 smart00090 RIO RIO-like kinase  98.6 3.8E-08 8.1E-13   75.3   4.7   46    2-50    152-197 (237)
432 PRK10345 hypothetical protein;  98.6 6.4E-08 1.4E-12   72.6   4.1   42    3-47    109-155 (210)
433 cd05119 RIO RIO kinase family,  98.6   7E-08 1.5E-12   70.9   3.9   45    2-50    118-163 (187)
434 KOG0601 Cyclin-dependent kinas  98.5 7.4E-08 1.6E-12   80.2   4.4  147    4-171   224-378 (524)
435 TIGR03724 arch_bud32 Kae1-asso  98.5 1.3E-07 2.8E-12   70.3   4.6   45    2-50     94-138 (199)
436 KOG0606 Microtubule-associated  98.5 1.7E-07 3.6E-12   82.8   5.4  145    4-167   910-1084(1205)
437 PRK14879 serine/threonine prot  98.5 1.9E-07   4E-12   70.0   4.3   45    2-50     99-143 (211)
438 PRK09605 bifunctional UGMP fam  98.4 1.4E-07   3E-12   80.6   3.6   45    2-50    432-476 (535)
439 KOG1243 Protein kinase [Genera  98.3 1.6E-06 3.5E-11   73.5   6.6   90    4-99    110-199 (690)
440 KOG0601 Cyclin-dependent kinas  98.3 6.5E-07 1.4E-11   74.7   4.0  147    1-176   369-518 (524)
441 cd05120 APH_ChoK_like Aminogly  98.2 3.1E-06 6.8E-11   59.3   4.8   49    2-50     90-138 (155)
442 cd05146 RIO3_euk RIO kinase fa  98.1 3.4E-06 7.4E-11   62.4   3.8   44    3-50    129-173 (197)
443 cd05151 ChoK Choline Kinase (C  98.1 4.8E-06   1E-10   60.0   4.5   46    3-49     88-135 (170)
444 PRK15123 lipopolysaccharide co  97.8 2.1E-05 4.6E-10   61.2   4.0   45    2-49    142-193 (268)
445 PF06293 Kdo:  Lipopolysacchari  97.8 2.1E-05 4.5E-10   59.0   3.8   46    2-50    122-170 (206)
446 COG3642 Mn2+-dependent serine/  97.8 3.7E-05   8E-10   55.9   4.6   44    3-50     97-140 (204)
447 TIGR01982 UbiB 2-polyprenylphe  97.7 5.6E-05 1.2E-09   63.1   5.2   46    3-51    261-307 (437)
448 KOG3087 Serine/threonine prote  97.5 0.00019   4E-09   52.3   4.6   45    3-50    118-165 (229)
449 PF01163 RIO1:  RIO1 family;  I  97.5 0.00017 3.7E-09   53.1   4.6   44    3-50    111-155 (188)
450 PRK09902 hypothetical protein;  97.2 0.00041 8.9E-09   51.8   3.9   46    2-50    132-179 (216)
451 PF06176 WaaY:  Lipopolysacchar  97.0  0.0011 2.5E-08   49.8   4.1   42    4-49    141-182 (229)
452 KOG3741 Poly(A) ribonuclease s  96.9   0.004 8.7E-08   52.3   7.2   77    2-100   397-473 (655)
453 PRK04750 ubiB putative ubiquin  96.3  0.0049 1.1E-07   52.7   4.2   37   12-51    274-314 (537)
454 COG0478 RIO-like serine/threon  96.3  0.0086 1.9E-07   46.5   4.8   45    3-50    207-251 (304)
455 KOG1035 eIF-2alpha kinase GCN2  95.4   0.043 9.3E-07   50.5   6.4  137    3-172   291-434 (1351)
456 PF12260 PIP49_C:  Protein-kina  95.4    0.03 6.6E-07   41.3   4.7   48    2-49     63-110 (188)
457 COG1718 RIO1 Serine/threonine   95.3   0.023 4.9E-07   43.6   3.7   44    3-50    171-215 (268)
458 cd05154 ACAD10_11_like Acyl-Co  95.0   0.024 5.1E-07   42.4   3.0   30   20-49    174-205 (223)
459 cd05155 APH_ChoK_like_1 Unchar  94.3   0.083 1.8E-06   40.2   4.6   29   21-49    165-193 (235)
460 cd05156 ChoK_euk Choline Kinas  93.7    0.16 3.4E-06   40.2   5.3   29   21-49    180-212 (302)
461 TIGR00938 thrB_alt homoserine   93.7   0.098 2.1E-06   41.6   4.1   29   21-49    188-216 (307)
462 TIGR02172 Fb_sc_TIGR02172 Fibr  93.4   0.079 1.7E-06   40.3   2.9   28   21-49    154-181 (226)
463 cd05150 APH Aminoglycoside 3'-  93.1   0.076 1.6E-06   40.6   2.5   30   20-49    163-192 (244)
464 cd05157 ETNK_euk Ethanolamine   93.1    0.09 1.9E-06   39.9   2.9   29   21-49    171-200 (235)
465 COG0510 ycfN Thiamine kinase a  93.0    0.16 3.5E-06   39.7   4.3   43    6-49    140-182 (269)
466 PF01636 APH:  Phosphotransfera  93.0   0.062 1.3E-06   40.3   1.9   29   21-49    167-196 (239)
467 COG5072 ALK1 Serine/threonine   92.9    0.14 3.1E-06   41.7   3.8   46    2-50    325-370 (488)
468 PF07387 Seadorna_VP7:  Seadorn  92.7    0.14   3E-06   38.9   3.3   38    8-46    151-188 (308)
469 cd05153 HomoserineK_II Homoser  92.7    0.17 3.6E-06   39.9   4.0   29   21-49    176-204 (296)
470 TIGR02906 spore_CotS spore coa  92.6    0.22 4.9E-06   39.4   4.7   28   21-49    188-215 (313)
471 PRK05231 homoserine kinase; Pr  92.6   0.085 1.8E-06   42.1   2.2   29   21-49    188-216 (319)
472 PRK10271 thiK thiamine kinase;  92.6     0.1 2.2E-06   38.5   2.4   28   21-49     78-105 (188)
473 TIGR02721 ycfN_thiK thiamine k  92.4    0.11 2.3E-06   40.2   2.5   28   21-49    147-174 (256)
474 PF01633 Choline_kinase:  Choli  92.3    0.11 2.3E-06   39.0   2.3   28   22-49    145-173 (211)
475 COG3173 Predicted aminoglycosi  91.5    0.19 4.1E-06   40.3   3.0   32   19-50    197-228 (321)
476 cd05152 MPH2' Macrolide 2'-Pho  91.2    0.18 3.9E-06   39.6   2.7   30   21-50    186-216 (276)
477 smart00587 CHK ZnF_C4 abd HLH   90.1     0.3 6.6E-06   36.2   2.9   29   21-49    121-154 (196)
478 KOG0576 Mitogen-activated prot  89.9    0.16 3.6E-06   44.1   1.5   88    5-103   343-430 (829)
479 COG2334 Putative homoserine ki  89.2    0.36 7.7E-06   39.0   2.8   28   22-49    199-227 (331)
480 PLN02236 choline kinase         89.1    0.36 7.8E-06   39.2   2.8   29   21-49    201-230 (344)
481 TIGR02904 spore_ysxE spore coa  88.3    0.33 7.1E-06   38.7   2.0   30   21-50    197-226 (309)
482 COG0661 AarF Predicted unusual  88.2    0.86 1.9E-05   39.1   4.5   30   22-51    286-315 (517)
483 PRK09550 mtnK methylthioribose  87.8     1.1 2.3E-05   37.3   4.8   30   20-50    223-252 (401)
484 KOG1093 Predicted protein kina  87.5    0.17 3.6E-06   43.2  -0.1   82   82-169   110-191 (725)
485 PLN02421 phosphotransferase, a  86.7     1.3 2.8E-05   35.8   4.6   28   22-49    184-212 (330)
486 KOG2268 Serine/threonine prote  85.5     1.5 3.2E-05   35.6   4.2   39    7-48    211-249 (465)
487 KOG1826 Ras GTPase activating   85.4   0.073 1.6E-06   50.9  -3.4   80   22-103  1361-1440(2724)
488 PRK11768 serine/threonine prot  82.3       2 4.3E-05   34.6   3.9   27   21-49    197-223 (325)
489 PRK12396 5-methylribose kinase  81.4     2.2 4.8E-05   35.4   3.9   31   19-50    226-256 (409)
490 PRK06148 hypothetical protein;  81.3     1.4 2.9E-05   41.3   2.9   29   22-50    205-236 (1013)
491 TIGR01767 MTRK 5-methylthiorib  81.0     1.4 3.1E-05   36.0   2.6   30   20-50    192-221 (370)
492 PF02958 EcKinase:  Ecdysteroid  80.3     1.1 2.4E-05   35.3   1.7   29   21-49    216-249 (294)
493 PLN02756 S-methyl-5-thioribose  78.2     3.9 8.5E-05   34.1   4.4   31   19-50    229-259 (418)
494 PLN02876 acyl-CoA dehydrogenas  78.1     2.4 5.1E-05   38.8   3.4   30   21-50    226-257 (822)
495 PRK10593 hypothetical protein;  77.8     2.3 4.9E-05   33.8   2.9   28   19-46    192-221 (297)
496 PRK06149 hypothetical protein;  76.7     2.8   6E-05   39.1   3.4   29   22-50    210-243 (972)
497 PHA03111 Ser/Thr kinase; Provi  76.5     2.6 5.6E-05   34.2   2.7   14   22-35    304-317 (444)
498 KOG3960 Myogenic helix-loop-he  76.1      12 0.00026   28.8   5.9   42  143-184   131-179 (284)
499 PF05445 Pox_ser-thr_kin:  Poxv  74.9     2.8 6.2E-05   34.2   2.6   13   22-34    300-312 (434)
500 PF10707 YrbL-PhoP_reg:  PhoP r  74.1     7.6 0.00017   28.9   4.6   36   10-48    130-170 (199)

No 1  
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00  E-value=1.8e-34  Score=222.93  Aligned_cols=151  Identities=29%  Similarity=0.435  Sum_probs=123.5

Q ss_pred             hhHHHHHHHHHHhhc-CCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHC-KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~-~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.++++||.|||. .+   |+||||||+|+|++.+|.+||||||.+...-.    .....+.||..||+||.+.+..|
T Consensus       182 ~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn----S~a~tfvGT~~YMsPERi~g~~Y  254 (364)
T KOG0581|consen  182 KIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVN----SIANTFVGTSAYMSPERISGESY  254 (364)
T ss_pred             HHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhh----hhcccccccccccChhhhcCCcC
Confidence            588999999999995 66   99999999999999999999999999876422    24567889999999999999999


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHH-HHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRR-CLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~~  159 (213)
                      +.++||||||+.++|+..|+.||........           .--..+..+++ ...+..|.. +.++|.++|..||+.|
T Consensus       255 s~~sDIWSLGLsllE~a~GrfP~~~~~~~~~-----------~~~~Ll~~Iv~-~ppP~lP~~~fS~ef~~FV~~CL~Kd  322 (364)
T KOG0581|consen  255 SVKSDIWSLGLSLLELAIGRFPYPPPNPPYL-----------DIFELLCAIVD-EPPPRLPEGEFSPEFRSFVSCCLRKD  322 (364)
T ss_pred             CcccceecccHHHHHHhhCCCCCCCcCCCCC-----------CHHHHHHHHhc-CCCCCCCcccCCHHHHHHHHHHhcCC
Confidence            9999999999999999999999975411111           00122333333 223445564 8999999999999999


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      |.+||+++++++
T Consensus       323 p~~R~s~~qLl~  334 (364)
T KOG0581|consen  323 PSERPSAKQLLQ  334 (364)
T ss_pred             cccCCCHHHHhc
Confidence            999999999987


No 2  
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00  E-value=1.1e-33  Score=226.26  Aligned_cols=162  Identities=36%  Similarity=0.516  Sum_probs=134.9

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC-ceEEeeeecccccCCCCCCcccccccccccccCccccc--c
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF-NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM--S   77 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~--~   77 (213)
                      ++|+.||++|+.|||+++.  |||||||++|+|++.++ .+||+|||+++......  .......||+.|+|||++.  .
T Consensus       145 l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~  220 (362)
T KOG0192|consen  145 LRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEK  220 (362)
T ss_pred             HHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCC
Confidence            4789999999999998863  89999999999999997 99999999997642211  2223367899999999999  5


Q ss_pred             CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcC
Q 028134           78 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLN  157 (213)
Q Consensus        78 ~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  157 (213)
                      ..++.++||||||+++|||++|..||.....                ......++....++.++..+.+.+..+|.+||+
T Consensus       221 ~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~----------------~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~  284 (362)
T KOG0192|consen  221 SPYTEKSDVYSFGIVLWELLTGEIPFEDLAP----------------VQVASAVVVGGLRPPIPKECPPHLSSLMERCWL  284 (362)
T ss_pred             CcCCccchhhhHHHHHHHHHHCCCCCCCCCH----------------HHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCC
Confidence            6899999999999999999999999973222                233344555666777777899999999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHhhccCC
Q 028134          158 EEANFRPLINDIVVALDYLVSQRDS  182 (213)
Q Consensus       158 ~~p~~Rps~~ev~~~L~~l~~~~~~  182 (213)
                      .||..||++.+|+..|+.+.+....
T Consensus       285 ~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  285 VDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHhhcc
Confidence            9999999999999999999885553


No 3  
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.2e-32  Score=221.19  Aligned_cols=176  Identities=55%  Similarity=0.926  Sum_probs=148.9

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccc-cccccccCccccccCC
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV-MGTYGYCAPEYAMSGK   79 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~Pe~~~~~~   79 (213)
                      ++|+.++|+||+|||....++|+|||||++|||+|.+...||+|||++......  ....... .||..|++||+...+.
T Consensus       177 ~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~  254 (361)
T KOG1187|consen  177 LKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGK  254 (361)
T ss_pred             HHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc--ccceeeecCCCCccCChhhhccCC
Confidence            479999999999999988778999999999999999999999999999654321  1111112 7899999999999889


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccC-CCCCH-HHHHHHHHHHHhhcC
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLH-GRYPR-RCLNYAVAVTAMCLN  157 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~li~~cl~  157 (213)
                      .+.++||||||++++|+++|+.+.+...........+|....+. .+.+.+++|+.+. ..++. .....+..+..+|++
T Consensus       255 lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~-~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~  333 (361)
T KOG1187|consen  255 LTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE-EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLR  333 (361)
T ss_pred             cCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH-CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcC
Confidence            99999999999999999999999887666666668888877776 4499999999987 55554 677889999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHhhc
Q 028134          158 EEANFRPLINDIVVALDYLVSQ  179 (213)
Q Consensus       158 ~~p~~Rps~~ev~~~L~~l~~~  179 (213)
                      .+|.+||+|.+|++.|+.+...
T Consensus       334 ~~~~~RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  334 PDPKERPTMSQVVKELEGILSL  355 (361)
T ss_pred             cCCCcCcCHHHHHHHHHhhccc
Confidence            9999999999999999665544


No 4  
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.98  E-value=8.8e-33  Score=222.15  Aligned_cols=159  Identities=31%  Similarity=0.456  Sum_probs=133.4

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +.++.|||+|++||++++   +|||||.+.|||++.+..+||+|||+++...+.. ........-+..|.|||.+...++
T Consensus       306 l~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~-Y~~~~~~kfPIkWtAPEa~~~~~F  381 (468)
T KOG0197|consen  306 LDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDE-YTASEGGKFPIKWTAPEALNYGKF  381 (468)
T ss_pred             HHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCc-eeecCCCCCCceecCHHHHhhCCc
Confidence            468999999999999998   9999999999999999999999999999432222 112222334678999999999999


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.++||||||+++||+++ |+.||..                 ....++.+.++...+-..|..|++++.++|..||+.+
T Consensus       382 S~kSDVWSFGVlL~E~fT~G~~py~~-----------------msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~  444 (468)
T KOG0197|consen  382 SSKSDVWSFGVLLWELFTYGRVPYPG-----------------MSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHED  444 (468)
T ss_pred             ccccceeehhhhHHHHhccCCCCCCC-----------------CCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCC
Confidence            999999999999999987 6777651                 1245566677777777889999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHhhcc
Q 028134          160 ANFRPLINDIVVALDYLVSQR  180 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l~~~~  180 (213)
                      |++|||++.+...|+.+.+..
T Consensus       445 P~~RPtF~~L~~~l~~~~~~~  465 (468)
T KOG0197|consen  445 PEDRPTFETLREVLEDFFTST  465 (468)
T ss_pred             cccCCCHHHHHHHHHHhhhcc
Confidence            999999999999998887654


No 5  
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.97  E-value=1.9e-31  Score=214.09  Aligned_cols=159  Identities=26%  Similarity=0.345  Sum_probs=121.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|+++||+|||+++   ++|+||||+||+++.++.++|+|||++................++..|+|||.+.+..++
T Consensus       178 ~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  254 (338)
T cd05102         178 CYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYT  254 (338)
T ss_pred             HHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCC
Confidence            47889999999999998   999999999999999999999999998754322222222233456789999999888899


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|||||||++|||++ |..||.......                .....+........+..+...+.+++.+||+.||
T Consensus       255 ~~sDiwslG~il~el~~~g~~pf~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp  318 (338)
T cd05102         255 TQSDVWSFGVLLWEIFSLGASPYPGVQINE----------------EFCQRLKDGTRMRAPENATPEIYRIMLACWQGDP  318 (338)
T ss_pred             cccCHHHHHHHHHHHHhCCCCCCCCCCccH----------------HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999997 999986432111                0001111111112234556789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhc
Q 028134          161 NFRPLINDIVVALDYLVSQ  179 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~  179 (213)
                      ++||++.+|++.|+.+..+
T Consensus       319 ~~RPs~~el~~~l~~~~~~  337 (338)
T cd05102         319 KERPTFSALVEILGDLLQE  337 (338)
T ss_pred             hhCcCHHHHHHHHHHHHhc
Confidence            9999999999999998764


No 6  
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.97  E-value=8.7e-32  Score=203.40  Aligned_cols=172  Identities=22%  Similarity=0.305  Sum_probs=126.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      ++++|++.|+.|+|+++   ++||||||+|||++++|.+||||||+++....  ..........|.||+|||.+.+ .+|
T Consensus       105 ~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~--pgd~YTDYVATRWYRaPELLvGDtqY  179 (396)
T KOG0593|consen  105 KYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSA--PGDNYTDYVATRWYRAPELLVGDTQY  179 (396)
T ss_pred             HHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcC--CcchhhhhhhhhhccChhhhcccCcC
Confidence            57899999999999998   99999999999999999999999999987543  2223345678999999999987 689


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchh-hhhhhhhhhhhhcccccC----------CCC---CHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR-PFLKDQKKFVHLVDPLLH----------GRY---PRRCLN  146 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~---~~~~~~  146 (213)
                      ....|||++||++.||++|.+.|.+..+.+....+.... +++++...+... ++.+.          +.+   -.....
T Consensus       180 G~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~-N~~F~Gv~lP~~~~~epLe~k~p~~s~  258 (396)
T KOG0593|consen  180 GKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSS-NPFFHGVRLPEPEHPEPLERKYPKISN  258 (396)
T ss_pred             CCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhcc-CCceeeeecCCCCCccchhhhcccchH
Confidence            999999999999999999999998766655433222111 111111111110 11110          011   123445


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHH--HHHHHhhc
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVV--ALDYLVSQ  179 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~--~L~~l~~~  179 (213)
                      .+.+++..||+.||++|++.++++.  .++.+.++
T Consensus       259 ~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~er  293 (396)
T KOG0593|consen  259 VLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFIER  293 (396)
T ss_pred             HHHHHHHHHhcCCccccccHHHHhcChHHHHHHHH
Confidence            7899999999999999999999986  34444444


No 7  
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97  E-value=5.1e-31  Score=214.71  Aligned_cols=145  Identities=27%  Similarity=0.418  Sum_probs=121.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .+++||+.||.|||+++   |+|||||..|+|++.+..+||+|||++.....  ....+....||+.|.|||++.....+
T Consensus       122 y~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~--~~Erk~TlCGTPNYIAPEVl~k~gHs  196 (592)
T KOG0575|consen  122 YFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEY--DGERKKTLCGTPNYIAPEVLNKSGHS  196 (592)
T ss_pred             HHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecC--cccccceecCCCcccChhHhccCCCC
Confidence            47899999999999999   99999999999999999999999999987422  22445678899999999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhccccc--CCCCCHHHHHHHHHHHHhhcCcC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL--HGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      ..+||||+|||+|-|+.|++||+.                    +.+.+..+...  .-.+|.....+..+||..+|+.|
T Consensus       197 fEvDiWSlGcvmYtLL~G~PPFet--------------------k~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~  256 (592)
T KOG0575|consen  197 FEVDIWSLGCVMYTLLVGRPPFET--------------------KTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRPN  256 (592)
T ss_pred             CchhhhhhhhHHHhhhhCCCCccc--------------------chHHHHHHHHHhcCcccccccCHHHHHHHHHHhcCC
Confidence            999999999999999999999972                    22222222211  12345677788999999999999


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      |.+|||+.+|+.
T Consensus       257 P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  257 PSERPSLDEVLD  268 (592)
T ss_pred             cccCCCHHHHhc
Confidence            999999999987


No 8  
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97  E-value=1.9e-30  Score=194.44  Aligned_cols=155  Identities=26%  Similarity=0.317  Sum_probs=120.9

Q ss_pred             hhHHHHHHHHHHhhcCC-CCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKA-NPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~-~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.||+.||..+|.+- ++.|+||||||.|||++.+|.+||+|||+++.+..  .........||+.||+||.+++.+|
T Consensus       128 k~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s--~~tfA~S~VGTPyYMSPE~i~~~~Y  205 (375)
T KOG0591|consen  128 KYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSS--KTTFAHSLVGTPYYMSPERIHESGY  205 (375)
T ss_pred             HHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcc--hhHHHHhhcCCCcccCHHHHhcCCC
Confidence            67899999999999842 23399999999999999999999999999987422  2333456789999999999999999


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCC-HHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYP-RRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~~  159 (213)
                      +.++||||+||++|||..-..||.+..                 -..+..-+...-.+++| .-+...+..+|..|+..|
T Consensus       206 ~~kSDiWslGCllyEMcaL~~PF~g~n-----------------~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd  268 (375)
T KOG0591|consen  206 NFKSDIWSLGCLLYEMCALQSPFYGDN-----------------LLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVD  268 (375)
T ss_pred             CcchhHHHHHHHHHHHHhcCCCccccc-----------------HHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCC
Confidence            999999999999999999999997431                 11122222222222234 678889999999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 028134          160 ANFRPLINDIVVALDY  175 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~  175 (213)
                      |+.||+.-.+++.++.
T Consensus       269 ~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  269 PEQRPDTVPYVQDIQS  284 (375)
T ss_pred             cccCCCcchHHHHHHH
Confidence            9999995444444433


No 9  
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97  E-value=3.5e-31  Score=207.09  Aligned_cols=148  Identities=27%  Similarity=0.352  Sum_probs=116.7

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCC---CceEEeeeecccccCCCCCCcccccccccccccCccccccCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDND---FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK   79 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~   79 (213)
                      +++|++.||.|||++|   |+||||||+|||++.+   ..+|++|||++...+   .........||+.|.|||++.+..
T Consensus       281 ~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g---~~sfm~TlCGTpsYvAPEVl~~kg  354 (475)
T KOG0615|consen  281 LFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG---EGSFMKTLCGTPSYVAPEVLASKG  354 (475)
T ss_pred             HHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccchhhccc---cceehhhhcCCccccChhheecCC
Confidence            6899999999999999   9999999999999765   778999999998643   333455688999999999998665


Q ss_pred             C---CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccc--cCCCCCHHHHHHHHHHHHh
Q 028134           80 L---TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL--LHGRYPRRCLNYAVAVTAM  154 (213)
Q Consensus        80 ~---~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~  154 (213)
                      .   ..+.|+||+||++|-+++|.+||........               ...++....  +.+..-.+..++..++|.+
T Consensus       355 ~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s---------------l~eQI~~G~y~f~p~~w~~Iseea~dlI~~  419 (475)
T KOG0615|consen  355 VEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS---------------LKEQILKGRYAFGPLQWDRISEEALDLINW  419 (475)
T ss_pred             eecccchheeeeccceEEEEeccCCCcccccCCcc---------------HHHHHhcCcccccChhhhhhhHHHHHHHHH
Confidence            4   3477999999999999999999974433321               111222211  1112235778899999999


Q ss_pred             hcCcCCCCCCCHHHHHH
Q 028134          155 CLNEEANFRPLINDIVV  171 (213)
Q Consensus       155 cl~~~p~~Rps~~ev~~  171 (213)
                      ||..||++||++.|+++
T Consensus       420 mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  420 MLVVDPENRPSADEALN  436 (475)
T ss_pred             hhEeCcccCcCHHHHhc
Confidence            99999999999999985


No 10 
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97  E-value=5.9e-31  Score=205.26  Aligned_cols=154  Identities=28%  Similarity=0.389  Sum_probs=118.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC-CCceEEeeeecccccCCCCCC-cccccccccccccCccccccC-
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN-DFNPKLSDFGLAKLGPVGDNT-HVSTRVMGTYGYCAPEYAMSG-   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~-~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~~-   78 (213)
                      ++.+|+++||+|||+++   ++|+|||++|||++. ++.+||+|||.+......... .......||+.|++||++..+ 
T Consensus       121 ~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~  197 (313)
T KOG0198|consen  121 RYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGE  197 (313)
T ss_pred             HHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCC
Confidence            56899999999999999   999999999999999 799999999998764321111 223346789999999999853 


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      ....++||||+||++.||++|..||......               ...+..+......+.+|...+.+..+++..|+..
T Consensus       198 ~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~---------------~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~  262 (313)
T KOG0198|consen  198 VARRESDIWSLGCTVVEMLTGKPPWSEFFEE---------------AEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKR  262 (313)
T ss_pred             cCCccchhhhcCCEEEeccCCCCcchhhcch---------------HHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhc
Confidence            3345999999999999999999999743000               1111222222223356677888999999999999


Q ss_pred             CCCCCCCHHHHHHHH
Q 028134          159 EANFRPLINDIVVAL  173 (213)
Q Consensus       159 ~p~~Rps~~ev~~~L  173 (213)
                      +|++|||+.++++..
T Consensus       263 ~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  263 DPEKRPTAEELLEHP  277 (313)
T ss_pred             CcccCcCHHHHhhCh
Confidence            999999999999743


No 11 
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.97  E-value=1.8e-30  Score=203.23  Aligned_cols=155  Identities=30%  Similarity=0.445  Sum_probs=121.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++................++..|+|||.+.+..++
T Consensus       128 ~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  204 (283)
T cd05048         128 HIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFT  204 (283)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCc
Confidence            57899999999999998   999999999999999999999999998754322222222334456789999998888899


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+|||||++|||++ |..||.....                 ..+...+........+..++..+.+++.+||+.+|
T Consensus       205 ~~sDv~slG~il~el~~~g~~p~~~~~~-----------------~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p  267 (283)
T cd05048         205 TESDIWSFGVVLWEIFSYGLQPYYGFSN-----------------QEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIP  267 (283)
T ss_pred             hhhhHHHHHHHHHHHHcCCCCCCCCCCH-----------------HHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCCh
Confidence            99999999999999997 9888863221                 11222222222233456678899999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      .+||++.+|++.|+++
T Consensus       268 ~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         268 ARRPRFKDIHTRLRSW  283 (283)
T ss_pred             hhCcCHHHHHHHHhcC
Confidence            9999999999999763


No 12 
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.97  E-value=4.2e-30  Score=204.57  Aligned_cols=163  Identities=23%  Similarity=0.352  Sum_probs=124.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.................+..|++||.+.+..++
T Consensus       113 ~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~  189 (316)
T cd05108         113 NWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYT  189 (316)
T ss_pred             HHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCC
Confidence            57889999999999998   999999999999999999999999999764332221111222335679999999888899


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++||+++ |..||.....                 ..+..++........+..+...+.+++..||..+|
T Consensus       190 ~~~Di~slGv~l~el~t~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  252 (316)
T cd05108         190 HQSDVWSYGVTVWELMTFGSKPYDGIPA-----------------SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA  252 (316)
T ss_pred             chhhhHHHHHHHHHHHcCCCCCCCCCCH-----------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999997 8888863211                 11111222222222234456678999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhccCCCc
Q 028134          161 NFRPLINDIVVALDYLVSQRDSHP  184 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~~~~~~  184 (213)
                      ++||++.+++..|..+........
T Consensus       253 ~~Rps~~~l~~~l~~~~~~~~~~~  276 (316)
T cd05108         253 DSRPKFRELIIEFSKMARDPQRYL  276 (316)
T ss_pred             hhCcCHHHHHHHHHHHHcCCchhe
Confidence            999999999999999887665443


No 13 
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96  E-value=1.2e-30  Score=219.60  Aligned_cols=162  Identities=27%  Similarity=0.417  Sum_probs=137.3

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      |.|+.||+.|+.||-++.   +|||||...||||.++..+||+|||+++-.+..+.........-+..||+||.+..+++
T Consensus       606 L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kF  682 (774)
T KOG1026|consen  606 LHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKF  682 (774)
T ss_pred             HHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcc
Confidence            468999999999999998   99999999999999999999999999997766665555556667889999999999999


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.++||||+||++||+++ |..||.+..                 +.++-+.+..+..-..|+.|+..+.+||..||+.+
T Consensus       683 TteSDVWs~GVvLWEIFsyG~QPy~glS-----------------n~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~  745 (774)
T KOG1026|consen  683 TTESDVWSFGVVLWEIFSYGKQPYYGLS-----------------NQEVIECIRAGQLLSCPENCPTEVYSLMLECWNEN  745 (774)
T ss_pred             cchhhhhhhhhhhhhhhccccCcccccc-----------------hHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcC
Confidence            999999999999999986 888886332                 22223333333335678999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHhhccCC
Q 028134          160 ANFRPLINDIVVALDYLVSQRDS  182 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l~~~~~~  182 (213)
                      |.+||+++||...|+.+......
T Consensus       746 P~~RPsF~eI~~~L~~~~~~s~~  768 (774)
T KOG1026|consen  746 PKRRPSFKEIHSRLQAWAQASPK  768 (774)
T ss_pred             cccCCCHHHHHHHHHHHHhcCcc
Confidence            99999999999999998876654


No 14 
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.96  E-value=6.4e-30  Score=207.94  Aligned_cols=157  Identities=25%  Similarity=0.366  Sum_probs=120.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+++   ++||||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       216 ~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  292 (374)
T cd05106         216 RFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYT  292 (374)
T ss_pred             HHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCC
Confidence            57899999999999998   999999999999999999999999998754322211122223345679999999888899


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+||++|+|++ |..||......                ......+........+...+.++.+++.+||+.+|
T Consensus       293 ~~~DvwSlGvil~ellt~G~~Pf~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp  356 (374)
T cd05106         293 VQSDVWSYGILLWEIFSLGKSPYPGILVN----------------SKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEP  356 (374)
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCcccccc----------------HHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999997 99998632211                11111222222222233345789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHh
Q 028134          161 NFRPLINDIVVALDYLV  177 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~  177 (213)
                      .+||++.+|++.|+++.
T Consensus       357 ~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         357 TERPTFSQISQLIQRQL  373 (374)
T ss_pred             hhCcCHHHHHHHHHHHh
Confidence            99999999999999875


No 15 
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.96  E-value=7.6e-30  Score=204.86  Aligned_cols=159  Identities=26%  Similarity=0.350  Sum_probs=122.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       177 ~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  253 (337)
T cd05054         177 SYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYT  253 (337)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCC
Confidence            57899999999999998   999999999999999999999999998764332221222233456689999999988999


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+||++|++++ |..||.......                .....+........+......+.+++.+||+.+|
T Consensus       254 ~~~Di~SlGv~l~el~t~g~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  317 (337)
T cd05054         254 TQSDVWSFGVLLWEIFSLGASPYPGVQIDE----------------EFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNP  317 (337)
T ss_pred             ccccHHHHHHHHHHHHHcCCCCCCCCCccH----------------HHHHHHhccCCCCCCccCCHHHHHHHHHHccCCh
Confidence            99999999999999997 999986422111                0111111111222234556789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhc
Q 028134          161 NFRPLINDIVVALDYLVSQ  179 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~  179 (213)
                      ++||++.||++.|+.+...
T Consensus       318 ~~RPs~~ell~~l~~~~~~  336 (337)
T cd05054         318 EDRPTFSELVEILGDLLQE  336 (337)
T ss_pred             hhCcCHHHHHHHHHHHHhc
Confidence            9999999999999988763


No 16 
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.96  E-value=2.6e-30  Score=199.83  Aligned_cols=147  Identities=29%  Similarity=0.358  Sum_probs=115.4

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL   82 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~   82 (213)
                      ++.+|+.||.|||+++   ||||||||+|||++.+|.++|+|||++...-  ........+.||..|+|||++...+++.
T Consensus       130 YlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~--~~~~~t~tfcGT~eYmAPEil~~~gy~~  204 (357)
T KOG0598|consen  130 YLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDL--KDGDATRTFCGTPEYMAPEILLGKGYDK  204 (357)
T ss_pred             HHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcc--cCCCccccccCCccccChHHHhcCCCCc
Confidence            4678999999999999   9999999999999999999999999998521  2222344578999999999999999999


Q ss_pred             ccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCCC
Q 028134           83 KSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANF  162 (213)
Q Consensus        83 ~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  162 (213)
                      ++|.||+|+++|+|++|.+||....                 ...+.+.+.+......+.-...+..+++...|..||++
T Consensus       205 ~vDWWsLGillYeML~G~pPF~~~~-----------------~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~  267 (357)
T KOG0598|consen  205 AVDWWSLGILLYEMLTGKPPFYAED-----------------VKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQ  267 (357)
T ss_pred             ccchHhHHHHHHHHhhCCCCCcCcc-----------------HHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHH
Confidence            9999999999999999999997322                 12222222222122234446778999999999999999


Q ss_pred             CC----CHHHHHH
Q 028134          163 RP----LINDIVV  171 (213)
Q Consensus       163 Rp----s~~ev~~  171 (213)
                      |.    ++.+|..
T Consensus       268 RLg~~~d~~~ik~  280 (357)
T KOG0598|consen  268 RLGGPGDAEEIKR  280 (357)
T ss_pred             hcCCCCChHHhhc
Confidence            95    5555544


No 17 
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96  E-value=2e-29  Score=202.20  Aligned_cols=161  Identities=28%  Similarity=0.372  Sum_probs=122.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       138 ~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  214 (334)
T cd05100         138 SCAYQVARGMEYLASQK---CIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYT  214 (334)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcC
Confidence            46889999999999998   999999999999999999999999998754222111111122334679999999888899


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|+|++ |..||.....                 ......+........+..+...+.+++.+||+.+|
T Consensus       215 ~~~Di~slG~il~el~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p  277 (334)
T cd05100         215 HQSDVWSFGVLLWEIFTLGGSPYPGIPV-----------------EELFKLLKEGHRMDKPANCTHELYMIMRECWHAVP  277 (334)
T ss_pred             chhhhHHHHHHHHHHHhcCCCCCCCCCH-----------------HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCh
Confidence            99999999999999998 7778752211                 11111111112222344556789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhccCC
Q 028134          161 NFRPLINDIVVALDYLVSQRDS  182 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~~~~  182 (213)
                      ++||++.|+++.|+.+.+....
T Consensus       278 ~~Rps~~ell~~l~~~~~~~~~  299 (334)
T cd05100         278 SQRPTFKQLVEDLDRVLTVTST  299 (334)
T ss_pred             hhCcCHHHHHHHHHHHhhhcCC
Confidence            9999999999999999876654


No 18 
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.96  E-value=1.4e-29  Score=198.21  Aligned_cols=159  Identities=23%  Similarity=0.356  Sum_probs=121.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++................++..|++||...+..++
T Consensus       113 ~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~  189 (279)
T cd05111         113 NWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYT  189 (279)
T ss_pred             HHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcC
Confidence            57899999999999998   999999999999999999999999998764332222222233456789999999888899


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++||+++ |..||.....                 ....+.+........+..+...+.+++.+||..+|
T Consensus       190 ~~~Dv~slG~il~el~t~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p  252 (279)
T cd05111         190 HQSDVWSYGVTVWEMMSYGAEPYAGMRP-----------------HEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDE  252 (279)
T ss_pred             chhhHHHHHHHHHHHHcCCCCCCCCCCH-----------------HHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCc
Confidence            99999999999999998 9888863221                 11112222222222233455678889999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhcc
Q 028134          161 NFRPLINDIVVALDYLVSQR  180 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~~  180 (213)
                      ++||++.|+++.|..+.+..
T Consensus       253 ~~Rps~~el~~~l~~~~~~~  272 (279)
T cd05111         253 NVRPTFKELANEFTRMARDP  272 (279)
T ss_pred             ccCcCHHHHHHHHHHHHhCC
Confidence            99999999999998877643


No 19 
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.96  E-value=1.5e-29  Score=199.13  Aligned_cols=158  Identities=27%  Similarity=0.368  Sum_probs=121.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.|++|||+++   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       127 ~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  203 (291)
T cd05094         127 HIASQIASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT  203 (291)
T ss_pred             HHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCC
Confidence            57899999999999998   999999999999999999999999998754332221222234456789999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|+|++ |..||......                 ...+.+........+..++..+.+++.+||+.+|
T Consensus       204 ~~~Di~slG~il~el~t~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  266 (291)
T cd05094         204 TESDVWSFGVILWEIFTYGKQPWFQLSNT-----------------EVIECITQGRVLERPRVCPKEVYDIMLGCWQREP  266 (291)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCCHH-----------------HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccCh
Confidence            99999999999999998 99988532211                 0111111111112233456679999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhc
Q 028134          161 NFRPLINDIVVALDYLVSQ  179 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~  179 (213)
                      ++||++.+|++.|+++...
T Consensus       267 ~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         267 QQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             hhCcCHHHHHHHHHHHHhh
Confidence            9999999999999999764


No 20 
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96  E-value=6.4e-30  Score=200.24  Aligned_cols=154  Identities=27%  Similarity=0.423  Sum_probs=118.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       128 ~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  204 (283)
T cd05091         128 HIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFS  204 (283)
T ss_pred             HHHHHHHHHHHHHHHcC---ccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCC
Confidence            47789999999999998   999999999999999999999999998754322222222233456789999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+||++|||++ |..||.....                 ....+.+........+..++..+.+++..||+.+|
T Consensus       205 ~~~Dv~slG~~l~el~~~g~~p~~~~~~-----------------~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p  267 (283)
T cd05091         205 IDSDIWSYGVVLWEVFSYGLQPYCGYSN-----------------QDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFP  267 (283)
T ss_pred             cchhHHHHHHHHHHHHcCCCCCCCCCCH-----------------HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCc
Confidence            99999999999999997 7778753211                 11111121222223455677889999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDY  175 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~  175 (213)
                      .+||++++|++.|+.
T Consensus       268 ~~RP~~~~i~~~l~~  282 (283)
T cd05091         268 SRRPRFKDIHSRLRT  282 (283)
T ss_pred             ccCCCHHHHHHHhhC
Confidence            999999999999864


No 21 
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=99.96  E-value=1.6e-29  Score=198.89  Aligned_cols=157  Identities=29%  Similarity=0.401  Sum_probs=119.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||++................++..|++||...+..++
T Consensus       136 ~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  212 (293)
T cd05053         136 SFAYQVARGMEFLASKK---CIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYT  212 (293)
T ss_pred             HHHHHHHHHHHHHHHCC---ccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcC
Confidence            57899999999999998   999999999999999999999999998754322211111222345679999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+|||||++|++++ |..||.....                 ......+........+..+...+.+++.+||..+|
T Consensus       213 ~~~Di~slG~il~el~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  275 (293)
T cd05053         213 HQSDVWSFGVLLWEIFTLGGSPYPGIPV-----------------EELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVP  275 (293)
T ss_pred             cccceeehhhHHHHHhcCCCCCCCCCCH-----------------HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCc
Confidence            99999999999999997 8888752211                 11111222222223344566789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhh
Q 028134          161 NFRPLINDIVVALDYLVS  178 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~  178 (213)
                      ++|||+.++++.|+.+++
T Consensus       276 ~~Rps~~eil~~l~~~~~  293 (293)
T cd05053         276 SQRPTFKQLVEDLDRMLT  293 (293)
T ss_pred             ccCcCHHHHHHHHHHhhC
Confidence            999999999999998763


No 22 
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.96  E-value=2.7e-29  Score=212.00  Aligned_cols=161  Identities=23%  Similarity=0.259  Sum_probs=130.7

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcc-------cccccccccccCcc
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-------STRVMGTYGYCAPE   73 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~-------~~~~~~~~~~~~Pe   73 (213)
                      |+|++|+++||++||.. ++||+|||||.+|||++.++..||||||.+...-.......       .-...-|+.|++||
T Consensus       147 LkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPE  225 (738)
T KOG1989|consen  147 LKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPE  225 (738)
T ss_pred             HHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChH
Confidence            58999999999999998 68899999999999999999999999999874322221100       01134588999999


Q ss_pred             ccc---cCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHH
Q 028134           74 YAM---SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVA  150 (213)
Q Consensus        74 ~~~---~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (213)
                      .+-   +.+.+.++|||+|||++|.|+....||+                    ..-..++++......-...+...|.+
T Consensus       226 MIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe--------------------~sg~laIlng~Y~~P~~p~ys~~l~~  285 (738)
T KOG1989|consen  226 MIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFE--------------------ESGKLAILNGNYSFPPFPNYSDRLKD  285 (738)
T ss_pred             HHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcC--------------------cCcceeEEeccccCCCCccHHHHHHH
Confidence            764   5678999999999999999999999997                    22234456655544445688999999


Q ss_pred             HHHhhcCcCCCCCCCHHHHHHHHHHHhhccCC
Q 028134          151 VTAMCLNEEANFRPLINDIVVALDYLVSQRDS  182 (213)
Q Consensus       151 li~~cl~~~p~~Rps~~ev~~~L~~l~~~~~~  182 (213)
                      ||..||+.||++||++.+|+..+..+......
T Consensus       286 LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~  317 (738)
T KOG1989|consen  286 LIRTMLQPNPDERPNIYQVLEEIFELANKPCP  317 (738)
T ss_pred             HHHHHhccCcccCCCHHHHHHHHHHHhcCCCC
Confidence            99999999999999999999999988876554


No 23 
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.96  E-value=7.2e-30  Score=207.90  Aligned_cols=163  Identities=29%  Similarity=0.492  Sum_probs=124.6

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc---
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS---   77 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~---   77 (213)
                      +.|+.|+++|+.|||.++   |+|+|||..|||+..++++||+|||++................+...|+|||+++.   
T Consensus       491 idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~  567 (678)
T KOG0193|consen  491 IDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDD  567 (678)
T ss_pred             HHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhccc
Confidence            368999999999999999   99999999999999999999999999875433333333344556778999999874   


Q ss_pred             CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcC
Q 028134           78 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLN  157 (213)
Q Consensus        78 ~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  157 (213)
                      .+|+..+||||||+|+|||++|..||....  .++.+  |+   ........+..      .....|.+++.+|+..||.
T Consensus       568 nPfS~qSDVYaFGiV~YELltg~lPysi~~--~dqIi--fm---VGrG~l~pd~s------~~~s~~pk~mk~Ll~~C~~  634 (678)
T KOG0193|consen  568 NPFSFQSDVYAFGIVWYELLTGELPYSIQN--RDQII--FM---VGRGYLMPDLS------KIRSNCPKAMKRLLSDCWK  634 (678)
T ss_pred             CCCCcccchhhhhHHHHHHHhCcCCcCCCC--hhheE--EE---ecccccCccch------hhhccCHHHHHHHHHHHHh
Confidence            478999999999999999999999997221  11111  11   01000001111      1234678899999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHhhc
Q 028134          158 EEANFRPLINDIVVALDYLVSQ  179 (213)
Q Consensus       158 ~~p~~Rps~~ev~~~L~~l~~~  179 (213)
                      .++++||.+.+|+..|+.+...
T Consensus       635 ~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  635 FDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             cCcccCccHHHHHHHHHHhhhc
Confidence            9999999999999988888774


No 24 
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.96  E-value=1.8e-29  Score=205.39  Aligned_cols=156  Identities=25%  Similarity=0.356  Sum_probs=118.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++............+...++..|++||.+.+..++
T Consensus       218 ~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  294 (375)
T cd05104         218 SFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYT  294 (375)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCC
Confidence            57899999999999998   999999999999999999999999998754332221222223345679999999988999


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|+|++ |..||......                ......+........+...+.++.+++..||+.||
T Consensus       295 ~~sDi~slG~~l~ellt~g~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  358 (375)
T cd05104         295 FESDVWSYGILLWEIFSLGSSPYPGMPVD----------------SKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADP  358 (375)
T ss_pred             CCCCHHHHHHHHHHHHhcCCCCCCCCCch----------------HHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999997 88888532111                11111122211222233345679999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++||++.+|++.|++.
T Consensus       359 ~~RPs~~eil~~l~~~  374 (375)
T cd05104         359 LKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             hHCcCHHHHHHHHHhh
Confidence            9999999999999863


No 25 
>PHA02988 hypothetical protein; Provisional
Probab=99.96  E-value=2.1e-29  Score=197.70  Aligned_cols=153  Identities=22%  Similarity=0.341  Sum_probs=120.1

Q ss_pred             hhHHHHHHHHHHhhcC-CCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc--C
Q 028134            2 KIAVGAARGLEYLHCK-ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS--G   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~-~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--~   78 (213)
                      +++.|++.|+.|||+. +   ++||||||+||+++.++.+|++|||++.......     ....++..|+|||.+.+  .
T Consensus       126 ~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~  197 (283)
T PHA02988        126 DMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFS  197 (283)
T ss_pred             HHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcEEEcccchHhhhcccc-----ccccCcccccCHHHhhhccc
Confidence            5789999999999974 6   7899999999999999999999999987532211     12356788999999875  6


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      .++.++|+|||||++|||++|..||......                .....++........+..++..+.+++.+||+.
T Consensus       198 ~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~----------------~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~  261 (283)
T PHA02988        198 EYTIKDDIYSLGVVLWEIFTGKIPFENLTTK----------------EIYDLIINKNNSLKLPLDCPLEIKCIVEACTSH  261 (283)
T ss_pred             cccchhhhhHHHHHHHHHHHCCCCCCCCCHH----------------HHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcC
Confidence            7899999999999999999999999632110                111112222223334446778899999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHhh
Q 028134          159 EANFRPLINDIVVALDYLVS  178 (213)
Q Consensus       159 ~p~~Rps~~ev~~~L~~l~~  178 (213)
                      ||++|||+.|+++.|+.+..
T Consensus       262 dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        262 DSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             CcccCcCHHHHHHHHHHHHh
Confidence            99999999999999988753


No 26 
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=5.7e-30  Score=203.39  Aligned_cols=164  Identities=21%  Similarity=0.235  Sum_probs=123.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc-cCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-SGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-~~~~   80 (213)
                      .|++||++||+|+|++|   +.|||+||+|||+..+..+||+|||+++....   .........|.||+|||++. ...|
T Consensus       114 nim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~S---kpPYTeYVSTRWYRAPEvLLrs~~Y  187 (538)
T KOG0661|consen  114 NIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRS---KPPYTEYVSTRWYRAPEVLLRSGYY  187 (538)
T ss_pred             HHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccccc---CCCcchhhhcccccchHHhhhcccc
Confidence            58999999999999999   99999999999999999999999999986432   22334567899999999876 6678


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhh-----hhhhhhhhhhhcccccCC--------CCCHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRP-----FLKDQKKFVHLVDPLLHG--------RYPRRCLNY  147 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--------~~~~~~~~~  147 (213)
                      +.+.|+|++|||++|+.+-++.|.+..+.++...+-....     .+....++...++-.+..        -++. +..+
T Consensus       188 s~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~-~s~~  266 (538)
T KOG0661|consen  188 SSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPN-ASSE  266 (538)
T ss_pred             CCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcc-cCHH
Confidence            9999999999999999999999977665544221110000     011112333333322211        1233 7788


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                      ..++|.+|+.+||++|||+.++++.
T Consensus       267 ~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  267 AASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HHHHHHHHhcCCCccCccHHHHhcC
Confidence            9999999999999999999999984


No 27 
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=99.96  E-value=2.2e-29  Score=197.86  Aligned_cols=159  Identities=27%  Similarity=0.377  Sum_probs=120.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       124 ~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  200 (288)
T cd05093         124 HIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT  200 (288)
T ss_pred             HHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCC
Confidence            57899999999999998   999999999999999999999999998754322211112223346689999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|+|++ |..||......                .....+.... ....+..+...+.+++.+||+.+|
T Consensus       201 ~~sDiwslG~il~~l~t~g~~p~~~~~~~----------------~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~p  263 (288)
T cd05093         201 TESDVWSLGVVLWEIFTYGKQPWYQLSNN----------------EVIECITQGR-VLQRPRTCPKEVYDLMLGCWQREP  263 (288)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCCHH----------------HHHHHHHcCC-cCCCCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999998 88887522211                0111111111 111223455679999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhcc
Q 028134          161 NFRPLINDIVVALDYLVSQR  180 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~~  180 (213)
                      .+||++.++.+.|+.+....
T Consensus       264 ~~Rpt~~~v~~~l~~~~~~~  283 (288)
T cd05093         264 HMRLNIKEIHSLLQNLAKAS  283 (288)
T ss_pred             hhCCCHHHHHHHHHHHHHhc
Confidence            99999999999999998654


No 28 
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.96  E-value=2e-29  Score=198.22  Aligned_cols=158  Identities=25%  Similarity=0.373  Sum_probs=122.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++................++..|++||...+..++
T Consensus       131 ~i~~~i~~~l~~LH~~~---ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~  207 (290)
T cd05045         131 SFAWQISRGMQYLAEMK---LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYT  207 (290)
T ss_pred             HHHHHHHHHHHHHHHCC---eehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcc
Confidence            57889999999999998   999999999999999999999999998754322221112223346689999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++++|++ |..||....                 ...+...+........+..+...+.+++..||+.+|
T Consensus       208 ~~~Di~slG~~l~el~t~g~~p~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P  270 (290)
T cd05045         208 TQSDVWSFGVLLWEIVTLGGNPYPGIA-----------------PERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEP  270 (290)
T ss_pred             hHhHHHHHHHHHHHHHhcCCCCCCCCC-----------------HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCc
Confidence            99999999999999998 888885321                 111222222222333345566789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhc
Q 028134          161 NFRPLINDIVVALDYLVSQ  179 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~  179 (213)
                      ++||+++++++.|+++..+
T Consensus       271 ~~Rp~~~~i~~~l~~~~~~  289 (290)
T cd05045         271 DKRPTFADISKELEKMMVK  289 (290)
T ss_pred             ccCCCHHHHHHHHHHHHhc
Confidence            9999999999999998764


No 29 
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.96  E-value=3.7e-29  Score=194.66  Aligned_cols=155  Identities=26%  Similarity=0.361  Sum_probs=119.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.................+..|++||.+.+..++
T Consensus       117 ~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  193 (273)
T cd05035         117 KFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYT  193 (273)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCC
Confidence            47899999999999998   999999999999999999999999998764333222222223345679999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+||++|||++ |..||......                 ...+.+........+..+...+.+++.+||..||
T Consensus       194 ~~~Dv~SlG~il~el~~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  256 (273)
T cd05035         194 SKSDVWAFGVTMWEIATRGQTPYPGVENH-----------------EIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADP  256 (273)
T ss_pred             cccchHHHHHHHHHHHhCCCCCCCCCCHH-----------------HHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCCh
Confidence            99999999999999998 88888532110                 1111111111222345567789999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++||++.|+++.|+.+
T Consensus       257 ~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         257 KDRPTFTKLREVLENI  272 (273)
T ss_pred             hhCcCHHHHHHHHHhh
Confidence            9999999999999876


No 30 
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=4e-29  Score=202.23  Aligned_cols=149  Identities=24%  Similarity=0.353  Sum_probs=121.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .|+++++.||+|||.++   |+|||||.+||++..+|.+||+|||++-.+....  .......||+-|+|||+.....|.
T Consensus       373 ~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~--~KR~TmVGTPYWMAPEVvtrk~YG  447 (550)
T KOG0578|consen  373 AICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ--SKRSTMVGTPYWMAPEVVTRKPYG  447 (550)
T ss_pred             HHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeecccccc--CccccccCCCCccchhhhhhcccC
Confidence            47899999999999999   9999999999999999999999999987643322  234557899999999999999999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhc-ccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV-DPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .+.||||||++++||+.|++||-....                -..+..+. +.......++.....|.+++.+||+.|+
T Consensus       448 ~KVDIWSLGIMaIEMveGEPPYlnE~P----------------lrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv  511 (550)
T KOG0578|consen  448 PKVDIWSLGIMAIEMVEGEPPYLNENP----------------LRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDV  511 (550)
T ss_pred             ccccchhhhhHHHHHhcCCCCccCCCh----------------HHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcch
Confidence            999999999999999999999952111                11122222 2222334467788999999999999999


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      ++||++.|+++
T Consensus       512 ~~RasA~eLL~  522 (550)
T KOG0578|consen  512 EQRASAKELLE  522 (550)
T ss_pred             hcCCCHHHHhc
Confidence            99999999997


No 31 
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.96  E-value=1.2e-29  Score=204.45  Aligned_cols=149  Identities=26%  Similarity=0.379  Sum_probs=119.2

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC-----------cccccccccccccC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT-----------HVSTRVMGTYGYCA   71 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~   71 (213)
                      ++.||+.||+|||++|   ||||||||+|||++.++.++|.|||.+.........           .....+.||..|.+
T Consensus       179 YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVS  255 (604)
T KOG0592|consen  179 YAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVS  255 (604)
T ss_pred             HHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccC
Confidence            5789999999999999   999999999999999999999999999875432111           11134789999999


Q ss_pred             ccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHH
Q 028134           72 PEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAV  151 (213)
Q Consensus        72 Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  151 (213)
                      ||++.+...+..+|+|+|||++|.|+.|.+||....+-                -....+++-  .-.++...++.+.+|
T Consensus       256 PElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney----------------liFqkI~~l--~y~fp~~fp~~a~dL  317 (604)
T KOG0592|consen  256 PELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY----------------LIFQKIQAL--DYEFPEGFPEDARDL  317 (604)
T ss_pred             HHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH----------------HHHHHHHHh--cccCCCCCCHHHHHH
Confidence            99999999999999999999999999999999632211                111122211  123455566789999


Q ss_pred             HHhhcCcCCCCCCCHHHHHHH
Q 028134          152 TAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       152 i~~cl~~~p~~Rps~~ev~~~  172 (213)
                      |...|..||.+|++..+|.+.
T Consensus       318 v~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  318 IKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             HHHHHccCccccccHHHHhhC
Confidence            999999999999999999873


No 32 
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=1.6e-29  Score=195.01  Aligned_cols=177  Identities=25%  Similarity=0.270  Sum_probs=129.1

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc-cCCCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-SGKLT   81 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-~~~~~   81 (213)
                      +++|++.||.|+|+.+   ++||||||.|++++.+..+|++|||+++..........-.....|.+|+|||.+. ...|+
T Consensus       130 f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt  206 (359)
T KOG0660|consen  130 FLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYT  206 (359)
T ss_pred             HHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhcccccc
Confidence            5799999999999999   9999999999999999999999999998754331222224466799999999876 45889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhh--------hhhhhhhhhhccc-ccCCCC-----CHHHHHH
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPF--------LKDQKKFVHLVDP-LLHGRY-----PRRCLNY  147 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~~~~~~-----~~~~~~~  147 (213)
                      .+.||||+|||+.||++|++.|.+.....+...+....+-        +.. ......+.. ...+..     -....+.
T Consensus       207 ~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s-~~ar~yi~slp~~p~~~f~~~fp~a~p~  285 (359)
T KOG0660|consen  207 KAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRS-EKARPYIKSLPQIPKQPFSSIFPNANPL  285 (359)
T ss_pred             chhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhcc-HHHHHHHHhCCCCCCCCHHHHcCCCCHH
Confidence            9999999999999999999999877655544333211111        110 111112211 111111     1255678


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHH--HHHHHhhccCCC
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVV--ALDYLVSQRDSH  183 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~--~L~~l~~~~~~~  183 (213)
                      ..+++.+||..||.+|+|++|.++  .|..+....+++
T Consensus       286 AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP  323 (359)
T KOG0660|consen  286 AIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP  323 (359)
T ss_pred             HHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence            899999999999999999999987  566666655543


No 33 
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.96  E-value=2.6e-29  Score=195.61  Aligned_cols=155  Identities=26%  Similarity=0.354  Sum_probs=117.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++++|||++.................+..|++||...+..++
T Consensus       116 ~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  192 (272)
T cd05075         116 KFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYT  192 (272)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcC
Confidence            57889999999999998   999999999999999999999999998764332211111223356689999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||......                 .....+........+..+...+.+++.+||+.+|
T Consensus       193 ~~~Di~slG~il~el~~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  255 (272)
T cd05075         193 TKSDVWSFGVTMWEIATRGQTPYPGVENS-----------------EIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNP  255 (272)
T ss_pred             hHHHHHHHHHHHHHHHcCCCCCCCCCCHH-----------------HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            99999999999999998 78888532111                 0111111111112233456678999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++||++.++++.|+.+
T Consensus       256 ~~Rps~~~l~~~l~~~  271 (272)
T cd05075         256 KDRPSFETLRCELEKA  271 (272)
T ss_pred             ccCcCHHHHHHHHHhh
Confidence            9999999999999875


No 34 
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.96  E-value=3.2e-29  Score=195.98  Aligned_cols=159  Identities=24%  Similarity=0.373  Sum_probs=120.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.................+..|++||...+..++
T Consensus       113 ~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  189 (279)
T cd05109         113 NWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFT  189 (279)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCC
Confidence            57899999999999998   999999999999999999999999998764322211111122345679999999888899


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+|||||++||+++ |..||.....                 ......+........+..+...+.+++..||..||
T Consensus       190 ~~~Di~slG~~l~el~t~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  252 (279)
T cd05109         190 HQSDVWSYGVTVWELMTFGAKPYDGIPA-----------------REIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDS  252 (279)
T ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCH-----------------HHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCCh
Confidence            99999999999999998 8888853211                 11111222222222234456788999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhcc
Q 028134          161 NFRPLINDIVVALDYLVSQR  180 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~~  180 (213)
                      ++||++.++++.|+.+....
T Consensus       253 ~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         253 ECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             hhCcCHHHHHHHHHHhhcCC
Confidence            99999999999988876544


No 35 
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.96  E-value=8.1e-30  Score=206.76  Aligned_cols=154  Identities=33%  Similarity=0.471  Sum_probs=126.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .|..+|+.|+.|||.+.   |+|||||..||||+.+..+||+|||-++.....   ...-.+.||..|||||++++.+.+
T Consensus       216 ~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcs  289 (904)
T KOG4721|consen  216 DWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCS  289 (904)
T ss_pred             HHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcc
Confidence            57899999999999998   999999999999999999999999998864332   334567899999999999999999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .+.||||||||+|||++|..||..-   . ...+.|.            +=...+....|..|++.|.-||++||+..|.
T Consensus       290 EKVDIwSfGVVLWEmLT~EiPYkdV---d-ssAIIwG------------VGsNsL~LpvPstcP~GfklL~Kqcw~sKpR  353 (904)
T KOG4721|consen  290 EKVDIWSFGVVLWEMLTGEIPYKDV---D-SSAIIWG------------VGSNSLHLPVPSTCPDGFKLLLKQCWNSKPR  353 (904)
T ss_pred             cccceehhHHHHHHHHhcCCCcccc---c-hheeEEe------------ccCCcccccCcccCchHHHHHHHHHHhcCCC
Confidence            9999999999999999999999511   1 1111111            1122334456788999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHh
Q 028134          162 FRPLINDIVVALDYLV  177 (213)
Q Consensus       162 ~Rps~~ev~~~L~~l~  177 (213)
                      .||++.+|+..|+-..
T Consensus       354 NRPSFrqil~HldIa~  369 (904)
T KOG4721|consen  354 NRPSFRQILLHLDIAS  369 (904)
T ss_pred             CCccHHHHHHHHhhcC
Confidence            9999999999886543


No 36 
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=2.9e-29  Score=202.22  Aligned_cols=152  Identities=27%  Similarity=0.385  Sum_probs=119.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCC-CceEEeeeecccccCCCCCCcccccccccccccCccccccCC-
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND-FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-   79 (213)
                      +++.|++.||+|+|+++   |+|||||++|++++.+ +.+||+|||++....  ..........|++.|+|||++.+.. 
T Consensus       124 ~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~  198 (370)
T KOG0583|consen  124 KYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGT  198 (370)
T ss_pred             HHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCC
Confidence            57899999999999999   9999999999999999 999999999998642  2233445678999999999999877 


Q ss_pred             CC-CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHH-HHHHHHHHHhhcC
Q 028134           80 LT-LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRC-LNYAVAVTAMCLN  157 (213)
Q Consensus        80 ~~-~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~cl~  157 (213)
                      |+ .++|+||+|+++|.|++|..||+.....                .....+....  ..+|.-. ..++..++.+||.
T Consensus       199 Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~----------------~l~~ki~~~~--~~~p~~~~S~~~~~Li~~mL~  260 (370)
T KOG0583|consen  199 YSGKAADVWSLGVILYVLLCGRLPFDDSNVP----------------NLYRKIRKGE--FKIPSYLLSPEARSLIEKMLV  260 (370)
T ss_pred             cCCchhhhhhhHHHHHHHHhCCCCCCCccHH----------------HHHHHHhcCC--ccCCCCcCCHHHHHHHHHHcC
Confidence            75 8899999999999999999999741111                1111111111  1233444 7889999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHh
Q 028134          158 EEANFRPLINDIVVALDYLV  177 (213)
Q Consensus       158 ~~p~~Rps~~ev~~~L~~l~  177 (213)
                      .||.+|+++.+|+ .-..+.
T Consensus       261 ~~P~~R~t~~~i~-~h~w~~  279 (370)
T KOG0583|consen  261 PDPSTRITLLEIL-EHPWFQ  279 (370)
T ss_pred             CCcccCCCHHHHh-hChhhc
Confidence            9999999999999 434444


No 37 
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96  E-value=5.4e-29  Score=197.07  Aligned_cols=158  Identities=27%  Similarity=0.370  Sum_probs=120.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++................++..|+|||.+.+..++
T Consensus       141 ~~~~qi~~al~~LH~~g---ivH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  217 (304)
T cd05101         141 SCTYQVARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYT  217 (304)
T ss_pred             HHHHHHHHHHHHHHHCC---eeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCC
Confidence            46789999999999998   999999999999999999999999998764332222222223345679999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||.....                 ..+...+........+..+...+.+++.+||..+|
T Consensus       218 ~~~Di~slG~~l~el~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  280 (304)
T cd05101         218 HQSDVWSFGVLMWEIFTLGGSPYPGIPV-----------------EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIP  280 (304)
T ss_pred             chhhHHHHHHHHHHHHcCCCCCcccCCH-----------------HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCh
Confidence            99999999999999998 6777742210                 11111111111222234567789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhc
Q 028134          161 NFRPLINDIVVALDYLVSQ  179 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~  179 (213)
                      ++||++.++++.|+++.+-
T Consensus       281 ~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         281 SHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             hhCCCHHHHHHHHHHHHHh
Confidence            9999999999999998764


No 38 
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.96  E-value=6.2e-29  Score=192.78  Aligned_cols=154  Identities=25%  Similarity=0.361  Sum_probs=118.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++........ ........+..|++||...+..++
T Consensus       108 ~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~  183 (263)
T cd05052         108 YMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFS  183 (263)
T ss_pred             HHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee-eccCCCCCccccCCHHHhccCCCC
Confidence            57899999999999998   99999999999999999999999999875422111 111112235679999999888899


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|+|++ |..||......                 .....+........+..++..+.+++.+||..+|
T Consensus       184 ~~~Dv~slG~il~el~t~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  246 (263)
T cd05052         184 IKSDVWAFGVLLWEIATYGMSPYPGIDLS-----------------QVYELLEKGYRMERPEGCPPKVYELMRACWQWNP  246 (263)
T ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCHH-----------------HHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCc
Confidence            99999999999999998 88888532111                 1111122222233345567889999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++||++.++++.|+.+
T Consensus       247 ~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         247 SDRPSFAEIHQAFETM  262 (263)
T ss_pred             ccCCCHHHHHHHHHhh
Confidence            9999999999999865


No 39 
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.96  E-value=3.5e-29  Score=186.09  Aligned_cols=165  Identities=21%  Similarity=0.257  Sum_probs=122.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      +++.++++||+|||.+.   |+||||||.|+|++.+|.+|++|||+++.+........  ...-|.+|+|||.+.+. .|
T Consensus       105 ~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~--~~V~TRWYRAPELLfGsr~Y  179 (318)
T KOG0659|consen  105 SYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT--HQVVTRWYRAPELLFGSRQY  179 (318)
T ss_pred             HHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCCcccc--cceeeeeccChHHhccchhc
Confidence            47899999999999998   99999999999999999999999999998654433222  23678899999998864 68


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhh-----------hhhhhhhhhhcccccCCCCCHHHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPF-----------LKDQKKFVHLVDPLLHGRYPRRCLNYAV  149 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (213)
                      ....|+||.|||+.|++.|.+.|.+..+.++...+-.....           +++.-++...-.+.... +-..+...+.
T Consensus       180 g~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~-lf~aas~d~l  258 (318)
T KOG0659|consen  180 GTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNN-LFPAASSDAL  258 (318)
T ss_pred             CCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcccc-ccccccHHHH
Confidence            89999999999999999999888766555443322211100           11111121111111111 2335666779


Q ss_pred             HHHHhhcCcCCCCCCCHHHHHHH
Q 028134          150 AVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       150 ~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                      +++..||..||.+|.++.|+++.
T Consensus       259 dLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  259 DLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             HHHHhhhccCchhcccHHHHhcc
Confidence            99999999999999999999864


No 40 
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=99.96  E-value=6.6e-29  Score=194.21  Aligned_cols=158  Identities=25%  Similarity=0.341  Sum_probs=120.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+.+   ++|+||+|+||+++.++.++++|||+++...............++..|++||.+.+..++
T Consensus       121 ~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~  197 (280)
T cd05043         121 HMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYS  197 (280)
T ss_pred             HHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCC
Confidence            57889999999999998   999999999999999999999999998754322211111223346679999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||......                 .+...+........+..++..+.+++.+||..+|
T Consensus       198 ~~~Di~slG~~l~el~~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  260 (280)
T cd05043         198 SASDVWSFGVLLWELMTLGQTPYVEIDPF-----------------EMAAYLKDGYRLAQPINCPDELFAVMACCWALDP  260 (280)
T ss_pred             chhhHHHhHHHHHHHhcCCCCCcCcCCHH-----------------HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCh
Confidence            99999999999999998 99998532111                 1111111111112233456788999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhc
Q 028134          161 NFRPLINDIVVALDYLVSQ  179 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~  179 (213)
                      ++||++.++++.|+.+.+.
T Consensus       261 ~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         261 EERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             hhCCCHHHHHHHHHHHHhc
Confidence            9999999999999998764


No 41 
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.96  E-value=7.3e-29  Score=193.84  Aligned_cols=153  Identities=29%  Similarity=0.411  Sum_probs=117.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.|+.|||+++   ++|+||||+||+++.++.++|+|||++................++..|+|||.+.+..++
T Consensus       126 ~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  202 (280)
T cd05049         126 QIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFT  202 (280)
T ss_pred             HHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcc
Confidence            46889999999999998   999999999999999999999999998753222211112233456789999999988999


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|+|++ |..||......                 .....+........+..+...+.+++.+||..+|
T Consensus       203 ~~~Di~slG~il~e~~~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  265 (280)
T cd05049         203 TESDVWSFGVVLWEIFTYGKQPWYGLSNE-----------------EVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDP  265 (280)
T ss_pred             hhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----------------HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCc
Confidence            99999999999999998 99998532211                 1111111111122234566789999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 028134          161 NFRPLINDIVVALD  174 (213)
Q Consensus       161 ~~Rps~~ev~~~L~  174 (213)
                      ++||++.||++.|+
T Consensus       266 ~~Rp~~~eil~~l~  279 (280)
T cd05049         266 QQRINIKDIHERLQ  279 (280)
T ss_pred             ccCCCHHHHHHHhh
Confidence            99999999999885


No 42 
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.96  E-value=5.9e-29  Score=196.84  Aligned_cols=160  Identities=24%  Similarity=0.382  Sum_probs=115.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       142 ~i~~~i~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  218 (304)
T cd05096         142 HVALQIASGMKYLSSLN---FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFT  218 (304)
T ss_pred             HHHHHHHHHHHHHHHCC---ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCC
Confidence            58899999999999998   999999999999999999999999998754322222222233456789999998888899


Q ss_pred             CccceeeHHHHHHHHHh--CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           82 LKSDIYSFGVVLLELIT--GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      .++|+||||+++|+|++  +..||......   ...........       ..........+..++..+.+++.+||+.+
T Consensus       219 ~~~Dv~slG~~l~el~~~~~~~p~~~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~li~~cl~~~  288 (304)
T cd05096         219 TASDVWAFGVTLWEILMLCKEQPYGELTDE---QVIENAGEFFR-------DQGRQVYLFRPPPCPQGLYELMLQCWSRD  288 (304)
T ss_pred             chhhhHHHHHHHHHHHHccCCCCCCcCCHH---HHHHHHHHHhh-------hccccccccCCCCCCHHHHHHHHHHccCC
Confidence            99999999999999987  44566432111   11111100000       00001111123356678999999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 028134          160 ANFRPLINDIVVALD  174 (213)
Q Consensus       160 p~~Rps~~ev~~~L~  174 (213)
                      |.+|||+.+|.+.|+
T Consensus       289 p~~RPs~~~i~~~l~  303 (304)
T cd05096         289 CRERPSFSDIHAFLT  303 (304)
T ss_pred             chhCcCHHHHHHHHh
Confidence            999999999998875


No 43 
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.96  E-value=7.3e-29  Score=191.77  Aligned_cols=154  Identities=27%  Similarity=0.393  Sum_probs=118.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcc-cccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.|++|||+++   ++|+||||.||+++.++.++|+|||++........... .....++..|++||.+....+
T Consensus        99 ~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  175 (257)
T cd05116          99 ELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKF  175 (257)
T ss_pred             HHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCc
Confidence            57899999999999998   99999999999999999999999999875432221111 111223468999998887788


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.++|+||||+++||+++ |..||.....                 ..+.+.+........+..+..++.++|.+||+.+
T Consensus       176 ~~~~Di~slG~~l~el~t~g~~p~~~~~~-----------------~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~  238 (257)
T cd05116         176 SSKSDVWSFGVLMWEAFSYGQKPYKGMKG-----------------NEVTQMIESGERMECPQRCPPEMYDLMKLCWTYG  238 (257)
T ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCCH-----------------HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccC
Confidence            899999999999999997 8999863211                 1112222222233345566788999999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 028134          160 ANFRPLINDIVVALDY  175 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~  175 (213)
                      |++||++.+|.+.|+.
T Consensus       239 p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         239 VDERPGFAVVELRLRN  254 (257)
T ss_pred             chhCcCHHHHHHHHhc
Confidence            9999999999999875


No 44 
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96  E-value=6.4e-29  Score=194.66  Aligned_cols=154  Identities=29%  Similarity=0.426  Sum_probs=118.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       128 ~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  204 (283)
T cd05090         128 HIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFS  204 (283)
T ss_pred             HHHHHHHHHHHHHHhcC---eehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCC
Confidence            47889999999999998   999999999999999999999999998754332222222333456679999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|+|++ |..||.....                 ....+.+........+..+...+.+++.+||+.+|
T Consensus       205 ~~~Dv~slG~il~el~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  267 (283)
T cd05090         205 SDSDIWSFGVVLWEIFSFGLQPYYGFSN-----------------QEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGP  267 (283)
T ss_pred             chhhhHHHHHHHHHHHcCCCCCCCCCCH-----------------HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCc
Confidence            99999999999999998 8888853211                 11112222222222344566789999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDY  175 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~  175 (213)
                      ++||++.+|++.|++
T Consensus       268 ~~Rp~~~~i~~~l~~  282 (283)
T cd05090         268 SRRPRFKDIHTRLRS  282 (283)
T ss_pred             ccCcCHHHHHHHhhc
Confidence            999999999999875


No 45 
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.96  E-value=6e-29  Score=194.64  Aligned_cols=154  Identities=30%  Similarity=0.398  Sum_probs=116.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|++|||+.+   ++|+||||+||+++.++.++|+|||++................++..|++||...+..++
T Consensus       126 ~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  202 (280)
T cd05092         126 AIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT  202 (280)
T ss_pred             HHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcC
Confidence            46789999999999998   999999999999999999999999998653222211112223345689999999888899


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+|||||++|++++ |..||......                 .....+........+..++..+.+++.+||+.+|
T Consensus       203 ~~~Di~slG~il~el~~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P  265 (280)
T cd05092         203 TESDIWSFGVVLWEIFTYGKQPWYQLSNT-----------------EAIECITQGRELERPRTCPPEVYAIMQGCWQREP  265 (280)
T ss_pred             chhhHHHHHHHHHHHHcCCCCCCccCCHH-----------------HHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999998 88887521111                 1111111111122234566779999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDY  175 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~  175 (213)
                      .+||++++|++.|++
T Consensus       266 ~~Rp~~~~l~~~l~~  280 (280)
T cd05092         266 QQRMVIKDIHSRLQA  280 (280)
T ss_pred             hhCCCHHHHHHHHhC
Confidence            999999999998863


No 46 
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96  E-value=8.7e-29  Score=196.21  Aligned_cols=160  Identities=29%  Similarity=0.376  Sum_probs=121.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||.+................++..|++||.+.+..++
T Consensus       144 ~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  220 (307)
T cd05098         144 SCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT  220 (307)
T ss_pred             HHHHHHHHHHHHHHHCC---cccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCC
Confidence            57899999999999998   999999999999999999999999998754221111111112234679999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|+++|+|++ |..||.....                 ..+...+........+..+...+.+++.+||..+|
T Consensus       221 ~~~DvwslG~~l~el~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  283 (307)
T cd05098         221 HQSDVWSFGVLLWEIFTLGGSPYPGVPV-----------------EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP  283 (307)
T ss_pred             cHHHHHHHHHHHHHHHcCCCCCCCcCCH-----------------HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCh
Confidence            99999999999999998 7888752211                 11111222222223344566789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhccC
Q 028134          161 NFRPLINDIVVALDYLVSQRD  181 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~~~  181 (213)
                      ++||++.+|++.|+.+.....
T Consensus       284 ~~Rps~~evl~~l~~~~~~~~  304 (307)
T cd05098         284 SQRPTFKQLVEDLDRILALTS  304 (307)
T ss_pred             hhCcCHHHHHHHHHHHHHHhh
Confidence            999999999999999887643


No 47 
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.96  E-value=7.7e-29  Score=207.97  Aligned_cols=150  Identities=26%  Similarity=0.324  Sum_probs=117.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++||||||+||+++.++.++|+|||++................++..|+|||.+.+..++
T Consensus       147 ~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s  223 (496)
T PTZ00283        147 LLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYS  223 (496)
T ss_pred             HHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCC
Confidence            46889999999999998   999999999999999999999999998764332222223345688999999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|||||||++|+|++|..||......                ......+.. .....+..+...+.+++..||+.+|.
T Consensus       224 ~k~DVwSlGvilyeLltG~~Pf~~~~~~----------------~~~~~~~~~-~~~~~~~~~~~~l~~li~~~L~~dP~  286 (496)
T PTZ00283        224 KKADMFSLGVLLYELLTLKRPFDGENME----------------EVMHKTLAG-RYDPLPPSISPEMQEIVTALLSSDPK  286 (496)
T ss_pred             cHHHHHHHHHHHHHHHHCCCCCCCCCHH----------------HHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcccChh
Confidence            9999999999999999999999632110                001111111 11223445677899999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.+++.
T Consensus       287 ~RPs~~ell~  296 (496)
T PTZ00283        287 RRPSSSKLLN  296 (496)
T ss_pred             hCcCHHHHHh
Confidence            9999999976


No 48 
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.95  E-value=1.8e-28  Score=194.02  Aligned_cols=161  Identities=25%  Similarity=0.353  Sum_probs=120.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       113 ~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  189 (303)
T cd05110         113 NWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFT  189 (303)
T ss_pred             HHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCC
Confidence            57899999999999998   999999999999999999999999998764322211111223345689999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||.....                 ......+........+..+...+.+++..||..+|
T Consensus       190 ~~~DiwslG~~l~el~t~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p  252 (303)
T cd05110         190 HQSDVWSYGVTIWELMTFGGKPYDGIPT-----------------REIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDA  252 (303)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCCCCH-----------------HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999997 8888853211                 11111121111112223455678999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhccCC
Q 028134          161 NFRPLINDIVVALDYLVSQRDS  182 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~~~~  182 (213)
                      ++||+++++++.|..+.+....
T Consensus       253 ~~Rp~~~~l~~~l~~~~~~~~~  274 (303)
T cd05110         253 DSRPKFKELAAEFSRMARDPQR  274 (303)
T ss_pred             hhCcCHHHHHHHHHHHHhchhh
Confidence            9999999999999998765443


No 49 
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.95  E-value=2.3e-28  Score=191.49  Aligned_cols=171  Identities=29%  Similarity=0.412  Sum_probs=122.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCc-ccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH-VSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++.......... ......++..|++||...+..+
T Consensus       111 ~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~  187 (283)
T cd05080         111 LFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKF  187 (283)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCC
Confidence            57899999999999998   9999999999999999999999999987543222111 1112234567999999888888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||||+++|+|++|..|+........ ........ ........+.++.......+..+...+.+++..||+.+|
T Consensus       188 ~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  265 (283)
T cd05080         188 SYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQG-QMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEA  265 (283)
T ss_pred             CcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhccccc-ccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccCh
Confidence            9999999999999999999998753321100 00000000 000112222222222333345667889999999999999


Q ss_pred             CCCCCHHHHHHHHHHHh
Q 028134          161 NFRPLINDIVVALDYLV  177 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~  177 (213)
                      ++||++++|++.|+.+.
T Consensus       266 ~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         266 KFRPTFRSLIPILKEMH  282 (283)
T ss_pred             hhCCCHHHHHHHHHHhh
Confidence            99999999999998874


No 50 
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95  E-value=8.1e-29  Score=203.62  Aligned_cols=144  Identities=28%  Similarity=0.397  Sum_probs=124.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      ++++||+.|+.|+|..+   |+|||+||+|++++.++.+||+|||.+..-   .........+|.++|.+||++.+.+|.
T Consensus       116 ~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe---~~gklLeTSCGSPHYA~PEIV~G~pYd  189 (786)
T KOG0588|consen  116 HFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLE---VPGKLLETSCGSPHYAAPEIVSGRPYD  189 (786)
T ss_pred             HHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecc---cCCccccccCCCcccCCchhhcCCCCC
Confidence            67899999999999998   999999999999999999999999998753   222334556889999999999999885


Q ss_pred             -CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCC--CCCHHHHHHHHHHHHhhcCc
Q 028134           82 -LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG--RYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        82 -~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~  158 (213)
                       .++||||+|+|+|.+++|+.||+                    .+.+..++.+..++  ++|.....+.++|+.+|+..
T Consensus       190 G~~sDVWSCGVILfALLtG~LPFd--------------------DdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~V  249 (786)
T KOG0588|consen  190 GRPSDVWSCGVILFALLTGKLPFD--------------------DDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRMLDV  249 (786)
T ss_pred             CCccccchhHHHHHHHHhCCCCCC--------------------CccHHHHHHHHHcCcccCCCcCCHHHHHHHHHHhcc
Confidence             88999999999999999999998                    44555555555455  35778889999999999999


Q ss_pred             CCCCCCCHHHHHH
Q 028134          159 EANFRPLINDIVV  171 (213)
Q Consensus       159 ~p~~Rps~~ev~~  171 (213)
                      ||++|-|++||++
T Consensus       250 Dp~~RiT~~eI~k  262 (786)
T KOG0588|consen  250 DPSTRITTEEILK  262 (786)
T ss_pred             CccccccHHHHhh
Confidence            9999999999987


No 51 
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=6.9e-29  Score=195.51  Aligned_cols=147  Identities=28%  Similarity=0.386  Sum_probs=121.3

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL   82 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~   82 (213)
                      ++++++.|+.|||+++   .+|+|||+.||++..+|.+||+|||++-....  .......+.||+.|||||++.+..|+.
T Consensus       116 ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~--~~~rr~tfvGTPfwMAPEVI~~~~Y~~  190 (467)
T KOG0201|consen  116 ILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTN--TVKRRKTFVGTPFWMAPEVIKQSGYDT  190 (467)
T ss_pred             ehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeec--hhhccccccccccccchhhhccccccc
Confidence            5789999999999998   99999999999999999999999999865322  222336688999999999999989999


Q ss_pred             ccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCCC
Q 028134           83 KSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANF  162 (213)
Q Consensus        83 ~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  162 (213)
                      ++||||||+..+||.+|.+|+.....+...                 -.+-+...+.+...+.+.+.++|..||..||+.
T Consensus       191 KADIWSLGITaiEla~GePP~s~~hPmrvl-----------------flIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~  253 (467)
T KOG0201|consen  191 KADIWSLGITAIELAKGEPPHSKLHPMRVL-----------------FLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEF  253 (467)
T ss_pred             hhhhhhhhHHHHHHhcCCCCCcccCcceEE-----------------EeccCCCCCccccccCHHHHHHHHHHhhcCccc
Confidence            999999999999999999999744443221                 122333334445567788999999999999999


Q ss_pred             CCCHHHHHH
Q 028134          163 RPLINDIVV  171 (213)
Q Consensus       163 Rps~~ev~~  171 (213)
                      ||++.++++
T Consensus       254 RpsA~~LLK  262 (467)
T KOG0201|consen  254 RPSAKELLK  262 (467)
T ss_pred             CcCHHHHhh
Confidence            999999886


No 52 
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.95  E-value=9.5e-29  Score=193.17  Aligned_cols=153  Identities=25%  Similarity=0.335  Sum_probs=115.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC---ceEEeeeecccccCCCCCCcccccccccccccCccccccC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF---NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~   78 (213)
                      +++.|++.|++|||+++   ++|+||||+||+++.++   .++|+|||++.................+..|++||.+.+.
T Consensus       120 ~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  196 (277)
T cd05036         120 FCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDG  196 (277)
T ss_pred             HHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcC
Confidence            57899999999999998   99999999999997654   5899999998754221111111122334679999999888


Q ss_pred             CCCCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcC
Q 028134           79 KLTLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLN  157 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  157 (213)
                      .++.++|+|||||++|+|++ |..||.....                 ......+........+..++..+.+++.+||+
T Consensus       197 ~~~~~~DiwslG~il~el~~~g~~pf~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~  259 (277)
T cd05036         197 IFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN-----------------QEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQ  259 (277)
T ss_pred             CcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----------------HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcC
Confidence            89999999999999999996 8888863211                 11112222222233345566789999999999


Q ss_pred             cCCCCCCCHHHHHHHHH
Q 028134          158 EEANFRPLINDIVVALD  174 (213)
Q Consensus       158 ~~p~~Rps~~ev~~~L~  174 (213)
                      .+|++||++.+|++.|+
T Consensus       260 ~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         260 HTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCcccCcCHHHHHHHhh
Confidence            99999999999999886


No 53 
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95  E-value=2.3e-28  Score=194.44  Aligned_cols=159  Identities=27%  Similarity=0.370  Sum_probs=119.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       138 ~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  214 (314)
T cd05099         138 SCAYQVARGMEYLESRR---CIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYT  214 (314)
T ss_pred             HHHHHHHHHHHHHHHCC---eeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcC
Confidence            46889999999999998   999999999999999999999999998754322111111112234579999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||......                 .....+........+..+...+.+++.+||..+|
T Consensus       215 ~~~DiwslG~~l~el~~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p  277 (314)
T cd05099         215 HQSDVWSFGILMWEIFTLGGSPYPGIPVE-----------------ELFKLLREGHRMDKPSNCTHELYMLMRECWHAVP  277 (314)
T ss_pred             ccchhhHHHHHHHHHHhCCCCCCCCCCHH-----------------HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            99999999999999998 78887522111                 1111111111122344556688899999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhcc
Q 028134          161 NFRPLINDIVVALDYLVSQR  180 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~~  180 (213)
                      ++||++.++++.|+++....
T Consensus       278 ~~Rps~~~ll~~l~~~~~~~  297 (314)
T cd05099         278 TQRPTFKQLVEALDKVLAAV  297 (314)
T ss_pred             ccCcCHHHHHHHHHHHHHHh
Confidence            99999999999999987643


No 54 
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.95  E-value=1.6e-28  Score=189.78  Aligned_cols=156  Identities=27%  Similarity=0.409  Sum_probs=119.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcc-cccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.|++|||..+   ++|+||||+||+++.++.++|+|||++........... .....++..|++||...+..+
T Consensus        99 ~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  175 (257)
T cd05060          99 ELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKF  175 (257)
T ss_pred             HHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCC
Confidence            57899999999999998   99999999999999999999999999875433222111 111123457999999988889


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.++|+||||+++|++++ |..||.....                 ......+........+..+...+.+++.+||..+
T Consensus       176 ~~~~Di~slG~~l~~~~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  238 (257)
T cd05060         176 SSKSDVWSYGVTLWEAFSYGAKPYGEMKG-----------------AEVIAMLESGERLPRPEECPQEIYSIMLSCWKYR  238 (257)
T ss_pred             CccchHHHHHHHHHHHHcCCCCCcccCCH-----------------HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCC
Confidence            999999999999999997 9999863211                 1111111111122334456678999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHh
Q 028134          160 ANFRPLINDIVVALDYLV  177 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l~  177 (213)
                      |++||++.++++.|+++.
T Consensus       239 p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         239 PEDRPTFSELESTFRRDP  256 (257)
T ss_pred             hhhCcCHHHHHHHHHhcc
Confidence            999999999999998764


No 55 
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.95  E-value=8.4e-29  Score=193.43  Aligned_cols=153  Identities=24%  Similarity=0.402  Sum_probs=115.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       123 ~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  199 (277)
T cd05062         123 QMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT  199 (277)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcC
Confidence            46789999999999998   999999999999999999999999998654322221111222346789999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||......                .....+... .....+..+...+.+++.+||+.+|
T Consensus       200 ~~~Di~slG~~l~el~~~~~~p~~~~~~~----------------~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p  262 (277)
T cd05062         200 TYSDVWSFGVVLWEIATLAEQPYQGMSNE----------------QVLRFVMEG-GLLDKPDNCPDMLFELMRMCWQYNP  262 (277)
T ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCHH----------------HHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999998 67787532111                111111111 1112234556789999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 028134          161 NFRPLINDIVVALD  174 (213)
Q Consensus       161 ~~Rps~~ev~~~L~  174 (213)
                      ++||++.|+++.|+
T Consensus       263 ~~Rps~~e~l~~l~  276 (277)
T cd05062         263 KMRPSFLEIISSIK  276 (277)
T ss_pred             hhCcCHHHHHHHhh
Confidence            99999999998875


No 56 
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=99.95  E-value=1.2e-28  Score=192.33  Aligned_cols=153  Identities=28%  Similarity=0.432  Sum_probs=117.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       123 ~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  199 (277)
T cd05032         123 QMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFT  199 (277)
T ss_pred             HHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCC
Confidence            47889999999999998   999999999999999999999999998754332221122233456789999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||......                 .....+........+..++..+.+++.+||+.+|
T Consensus       200 ~~~Di~slG~il~el~t~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  262 (277)
T cd05032         200 TKSDVWSFGVVLWEMATLAEQPYQGLSNE-----------------EVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNP  262 (277)
T ss_pred             cccchHHHHHHHHHhhccCCCCCccCCHH-----------------HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999998 88888522111                 1111111111223344567789999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 028134          161 NFRPLINDIVVALD  174 (213)
Q Consensus       161 ~~Rps~~ev~~~L~  174 (213)
                      ++|||+.++++.|+
T Consensus       263 ~~Rpt~~~l~~~l~  276 (277)
T cd05032         263 KMRPTFLEIVSSLK  276 (277)
T ss_pred             hhCCCHHHHHHHhc
Confidence            99999999999875


No 57 
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.95  E-value=9.5e-29  Score=191.00  Aligned_cols=176  Identities=23%  Similarity=0.253  Sum_probs=128.2

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCC-CceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDND-FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      +++||.+|++|||+.+   |+||||||+|+|++.+ |.+||||||.+.....+   ........+.-|+|||.+.+. .|
T Consensus       130 Yt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~---epniSYicSRyYRaPELifga~~Y  203 (364)
T KOG0658|consen  130 YTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG---EPNISYICSRYYRAPELIFGATEY  203 (364)
T ss_pred             HHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceeeccC---CCceeEEEeccccCHHHHcCcccc
Confidence            5799999999999998   9999999999999876 89999999999864222   222445678899999999865 78


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhh-----------cccccC-CCCCHHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHL-----------VDPLLH-GRYPRRCLNYA  148 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~~~~~  148 (213)
                      +.+.||||.|||+.||+.|++.|.+....+....+........ ...+..+           +.+... .-+.....++.
T Consensus       204 t~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt-~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~  282 (364)
T KOG0658|consen  204 TTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPT-REDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDA  282 (364)
T ss_pred             CceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCC-HHHHhhcCcccccccCcccccccceeecccCCCHHH
Confidence            9999999999999999999999987554444332221111111 1111111           111111 11345677889


Q ss_pred             HHHHHhhcCcCCCCCCCHHHHHH--HHHHHhhccCCCcc
Q 028134          149 VAVTAMCLNEEANFRPLINDIVV--ALDYLVSQRDSHPV  185 (213)
Q Consensus       149 ~~li~~cl~~~p~~Rps~~ev~~--~L~~l~~~~~~~~~  185 (213)
                      .+++.++|..+|.+|-++.|++.  .++.+.+.....+.
T Consensus       283 ~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~~~~l~~  321 (364)
T KOG0658|consen  283 LDLLSKLLQYSPSKRLSALEALAHPFFDELRDPNTKLPN  321 (364)
T ss_pred             HHHHHHHhccChhhcCCHHHHhcchhhHHhhCcCccCcC
Confidence            99999999999999999999986  67777776443333


No 58 
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.95  E-value=1.1e-28  Score=214.30  Aligned_cols=162  Identities=27%  Similarity=0.322  Sum_probs=131.2

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +.++.|+++|+.||++++   +|||||.+.|||++....+|++|||+++-++.............+..|||||.+..+.+
T Consensus       805 l~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iF  881 (1025)
T KOG1095|consen  805 LAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIF  881 (1025)
T ss_pred             HHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhccc
Confidence            468999999999999998   99999999999999999999999999985444333333333345678999999999999


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.++|||||||++||+++ |..||....                 +.++...+...-+-+.|..|+..+.++|..||+.+
T Consensus       882 tskSDvWsFGVllWEifslG~~PY~~~~-----------------n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~  944 (1025)
T KOG1095|consen  882 TSKSDVWSFGVLLWEIFSLGATPYPSRS-----------------NFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHD  944 (1025)
T ss_pred             ccccchhhhHHHHHHHHhCCCCCCCCcc-----------------hHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCC
Confidence            999999999999999987 788886222                 22333322222255668889999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHhhccCC
Q 028134          160 ANFRPLINDIVVALDYLVSQRDS  182 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l~~~~~~  182 (213)
                      |++||++..|++.+..+.+-...
T Consensus       945 pe~RP~F~~i~~q~~~i~~~~~~  967 (1025)
T KOG1095|consen  945 PEDRPSFRTIVEQDPAISNAALG  967 (1025)
T ss_pred             hhhCccHHHHHhhhhhhhhhhcc
Confidence            99999999999999888875544


No 59 
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.95  E-value=2e-28  Score=193.33  Aligned_cols=157  Identities=27%  Similarity=0.366  Sum_probs=119.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++......   ........+..|++||...+..++
T Consensus       123 ~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~  196 (297)
T cd05089         123 QFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLASKIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYT  196 (297)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeEEECCcCCCccccce---eccCCCCcCccccCchhhccCCCC
Confidence            57899999999999998   999999999999999999999999997532111   011111224569999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+|||||++|+|++ |..||......                 .....+........+..+...+.+++.+||..+|
T Consensus       197 ~~~DvwSlG~il~el~t~g~~pf~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  259 (297)
T cd05089         197 TKSDVWSFGVLLWEIVSLGGTPYCGMTCA-----------------ELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRP  259 (297)
T ss_pred             chhhHHHHHHHHHHHHcCCCCCCCCCCHH-----------------HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999997 98898532111                 1111111112222334566789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhccC
Q 028134          161 NFRPLINDIVVALDYLVSQRD  181 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~~~  181 (213)
                      .+||+++++++.|+.+.+...
T Consensus       260 ~~Rp~~~~i~~~l~~~~~~~~  280 (297)
T cd05089         260 YERPPFAQISVQLSRMLEARK  280 (297)
T ss_pred             hhCcCHHHHHHHHHHHHHhhc
Confidence            999999999999998887654


No 60 
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.95  E-value=2.6e-29  Score=194.73  Aligned_cols=152  Identities=30%  Similarity=0.462  Sum_probs=114.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +|+.|+++||+|||+++   ++|++|+++||+++.++.+||+|||+.....................|++||.+.+..++
T Consensus       107 ~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  183 (259)
T PF07714_consen  107 SIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYT  183 (259)
T ss_dssp             HHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEES
T ss_pred             ccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            68999999999999998   999999999999999999999999998764222222223334567789999999888899


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++||||||+++||+++ |..||....                 ...+...+....+...+..++..+.+++..||+.+|
T Consensus       184 ~ksDVysfG~~l~ei~~~~~~p~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p  246 (259)
T PF07714_consen  184 KKSDVYSFGMLLYEILTLGKFPFSDYD-----------------NEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDP  246 (259)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSGTTTTSC-----------------HHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSG
T ss_pred             ccccccccccccccccccccccccccc-----------------cccccccccccccceeccchhHHHHHHHHHHcCCCh
Confidence            99999999999999999 677764221                 112222222222333455677889999999999999


Q ss_pred             CCCCCHHHHHHHH
Q 028134          161 NFRPLINDIVVAL  173 (213)
Q Consensus       161 ~~Rps~~ev~~~L  173 (213)
                      ++||++.+|++.|
T Consensus       247 ~~RPs~~~i~~~L  259 (259)
T PF07714_consen  247 EKRPSFQEILQEL  259 (259)
T ss_dssp             GGS--HHHHHHHH
T ss_pred             hhCcCHHHHHhcC
Confidence            9999999999876


No 61 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.95  E-value=3.1e-28  Score=191.13  Aligned_cols=150  Identities=29%  Similarity=0.400  Sum_probs=115.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.......   ......++..|+|||.+.+..++
T Consensus       106 ~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~  179 (285)
T cd05631         106 FYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE---TVRGRVGTVGYMAPEVINNEKYT  179 (285)
T ss_pred             HHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC---eecCCCCCCCccCHhhhcCCCCC
Confidence            46889999999999998   9999999999999999999999999987542211   11234578899999999988999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||.........             ......+. .....++......+.+++.+||+.||.
T Consensus       180 ~~~DvwslGvil~el~~g~~pf~~~~~~~~~-------------~~~~~~~~-~~~~~~~~~~s~~~~~li~~~l~~~P~  245 (285)
T cd05631         180 FSPDWWGLGCLIYEMIQGQSPFRKRKERVKR-------------EEVDRRVK-EDQEEYSEKFSEDAKSICRMLLTKNPK  245 (285)
T ss_pred             cccCchhHHHHHHHHHhCCCCCCCCCcchhH-------------HHHHHHhh-cccccCCccCCHHHHHHHHHHhhcCHH
Confidence            9999999999999999999999744322110             00111110 111123445567889999999999999


Q ss_pred             CCCC-----HHHHHH
Q 028134          162 FRPL-----INDIVV  171 (213)
Q Consensus       162 ~Rps-----~~ev~~  171 (213)
                      +||+     ++++++
T Consensus       246 ~R~~~~~~~~~~~~~  260 (285)
T cd05631         246 ERLGCRGNGAAGVKQ  260 (285)
T ss_pred             HhcCCCCCCHHHHhc
Confidence            9997     788876


No 62 
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.95  E-value=2.3e-28  Score=189.16  Aligned_cols=155  Identities=25%  Similarity=0.355  Sum_probs=118.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcc-cccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++........... .....++..|++||.+.+..+
T Consensus        99 ~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  175 (257)
T cd05115          99 ELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKF  175 (257)
T ss_pred             HHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCC
Confidence            57899999999999998   99999999999999999999999999875322211111 111123467999999888888


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.++|+||||+++|++++ |..||.....                 ......+........+..+..++.+++.+||..+
T Consensus       176 ~~~~Di~slG~~l~el~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~  238 (257)
T cd05115         176 SSRSDVWSYGITMWEAFSYGQKPYKKMKG-----------------PEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYK  238 (257)
T ss_pred             CchhhHHHHHHHHHHHhcCCCCCcCcCCH-----------------HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999996 9989863211                 1112222222233345566788999999999999


Q ss_pred             CCCCCCHHHHHHHHHHH
Q 028134          160 ANFRPLINDIVVALDYL  176 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l  176 (213)
                      |++||++.+|.+.|+..
T Consensus       239 ~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         239 WEDRPNFAKVEERMRTY  255 (257)
T ss_pred             hhhCcCHHHHHHHHhhh
Confidence            99999999999998764


No 63 
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.95  E-value=1.8e-28  Score=189.45  Aligned_cols=150  Identities=28%  Similarity=0.402  Sum_probs=116.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.......     .....+..|++||.+.+..++
T Consensus       106 ~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~  177 (256)
T cd05082         106 KFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFS  177 (256)
T ss_pred             HHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC-----CCCccceeecCHHHHccCCCC
Confidence            57889999999999998   9999999999999999999999999886432211     122334579999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+||++|+|++ |..||.....                 ......+........+..++..+.+++.+||+.+|
T Consensus       178 ~~~Dv~slG~i~~~l~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  240 (256)
T cd05082         178 TKSDVWSFGILLWEIYSFGRVPYPRIPL-----------------KDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDA  240 (256)
T ss_pred             chhhhHHHHHHHHHHHhCCCCCCCCCCH-----------------HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCCh
Confidence            99999999999999997 8888852211                 11111111112223344567789999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++||++.++++.|+.+
T Consensus       241 ~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         241 ATRPSFLQLREQLEHI  256 (256)
T ss_pred             hhCcCHHHHHHHHhcC
Confidence            9999999999998754


No 64 
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.95  E-value=2.8e-28  Score=189.36  Aligned_cols=155  Identities=27%  Similarity=0.394  Sum_probs=117.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.|++|||+.+   ++|+||+|+||+++.++.++++|||++................++..|++||...+..++
T Consensus       110 ~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~  186 (266)
T cd05033         110 GMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFT  186 (266)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCc
Confidence            57899999999999998   999999999999999999999999998765311111111122345679999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||.....                 ......+........+..++..+.+++.+||+.+|
T Consensus       187 ~~~Dv~slG~~l~~l~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p  249 (266)
T cd05033         187 SASDVWSFGIVMWEVMSYGERPYWDMSN-----------------QDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDR  249 (266)
T ss_pred             cccchHHHHHHHHHHHccCCCCCCCCCH-----------------HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            99999999999999987 8888852210                 11111111111112234556789999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++||++.+|++.|+++
T Consensus       250 ~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         250 NERPTFSQIVSTLDKM  265 (266)
T ss_pred             ccCcCHHHHHHHHHhh
Confidence            9999999999999876


No 65 
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=99.95  E-value=1.9e-28  Score=188.80  Aligned_cols=153  Identities=24%  Similarity=0.364  Sum_probs=115.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|+++||.|||+++   ++|+||+|+||+++.++.++|+|||++.................+..|++||.+.+..++
T Consensus        98 ~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  174 (252)
T cd05084          98 QMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYS  174 (252)
T ss_pred             HHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCC
Confidence            47899999999999998   999999999999999999999999998643221111111111234569999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|+++|++++ |..||.....                 ......+........+..++..+.+++.+||+.+|
T Consensus       175 ~~~Dv~slG~il~e~~~~~~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  237 (252)
T cd05084         175 SESDVWSFGILLWEAFSLGAVPYANLSN-----------------QQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDP  237 (252)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCccccCH-----------------HHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCCh
Confidence            99999999999999997 8888852211                 11112222222223345567789999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 028134          161 NFRPLINDIVVALD  174 (213)
Q Consensus       161 ~~Rps~~ev~~~L~  174 (213)
                      ++||++.++.+.|+
T Consensus       238 ~~Rps~~~~~~~l~  251 (252)
T cd05084         238 GQRPSFSTVHQELQ  251 (252)
T ss_pred             hhCcCHHHHHHHHh
Confidence            99999999999886


No 66 
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.95  E-value=2e-28  Score=193.13  Aligned_cols=159  Identities=16%  Similarity=0.185  Sum_probs=117.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC-----cccccccccccccCccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT-----HVSTRVMGTYGYCAPEYAM   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~Pe~~~   76 (213)
                      .++.|++.||+|||+++   ++||||||+||+++.++.++|+|||++.........     .......++..|++||...
T Consensus       130 ~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~  206 (294)
T PHA02882        130 NIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHN  206 (294)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhC
Confidence            47899999999999998   999999999999999999999999998764322111     1112245889999999998


Q ss_pred             cCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhc
Q 028134           77 SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCL  156 (213)
Q Consensus        77 ~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  156 (213)
                      +..++.++|+||+||++++|++|..||........  ......     .+-+..+.....   ....++..+.+++..||
T Consensus       207 ~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  276 (294)
T PHA02882        207 GACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN--LIHAAK-----CDFIKRLHEGKI---KIKNANKFIYDFIECVT  276 (294)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH--HHHHhH-----HHHHHHhhhhhh---ccCCCCHHHHHHHHHHH
Confidence            88899999999999999999999999974422111  110000     000111111111   12234678999999999


Q ss_pred             CcCCCCCCCHHHHHHHH
Q 028134          157 NEEANFRPLINDIVVAL  173 (213)
Q Consensus       157 ~~~p~~Rps~~ev~~~L  173 (213)
                      ..+|++||++.++++.|
T Consensus       277 ~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        277 KLSYEEKPDYDALIKIF  293 (294)
T ss_pred             hCCCCCCCCHHHHHHhh
Confidence            99999999999999876


No 67 
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.95  E-value=6.9e-29  Score=195.05  Aligned_cols=162  Identities=22%  Similarity=0.303  Sum_probs=114.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++......   .......++..|+|||.+.+..++
T Consensus       114 ~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~  187 (290)
T cd07862         114 DMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYA  187 (290)
T ss_pred             HHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccceEeccCC---cccccccccccccChHHHhCCCCC
Confidence            57899999999999998   999999999999999999999999998754222   122334578899999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccc-hhhchhhhhhhhhhh-------hhhcccccCC---CCCHHHHHHHHH
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQN-LVSWSRPFLKDQKKF-------VHLVDPLLHG---RYPRRCLNYAVA  150 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~~~---~~~~~~~~~~~~  150 (213)
                      .++|+||+||++|+|++|..||.......... +..... ... ....       ...+.+....   .........+.+
T Consensus       188 ~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (290)
T cd07862         188 TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG-LPG-EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD  265 (290)
T ss_pred             CccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhC-CCC-hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHH
Confidence            99999999999999999999997543221110 000000 000 0000       0001000000   011234567889


Q ss_pred             HHHhhcCcCCCCCCCHHHHHH
Q 028134          151 VTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       151 li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ++.+||+.+|++|||+.|+++
T Consensus       266 li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         266 LLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             HHHHHhccCchhcCCHHHHhc
Confidence            999999999999999999974


No 68 
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95  E-value=1.6e-28  Score=198.36  Aligned_cols=150  Identities=25%  Similarity=0.370  Sum_probs=124.1

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC----
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG----   78 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~----   78 (213)
                      +-.|++.|+.++|.+|   |||.||||.|+++. +|.+||+|||.+.-+....+.-....+.||..||+||.+...    
T Consensus       465 ywkqML~aV~~IH~~g---IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~  540 (677)
T KOG0596|consen  465 YWKQMLLAVKTIHQHG---IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSR  540 (677)
T ss_pred             HHHHHHHHHHHHHHhc---eeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccc
Confidence            4589999999999999   99999999999986 478999999999877666666667788999999999987643    


Q ss_pred             -------CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHH-HHHH
Q 028134           79 -------KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLN-YAVA  150 (213)
Q Consensus        79 -------~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  150 (213)
                             +.++++||||||||+|+|+.|+.||.               .+......+..+.++...-+++.--.. ++.+
T Consensus       541 ~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~---------------~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~  605 (677)
T KOG0596|consen  541 ENGKSKIKISRKSDVWSLGCILYQMVYGKTPFG---------------QIINQIAKLHAITDPNHEIEFPDIPENDELID  605 (677)
T ss_pred             cCCCcceeecCccchhhhhhHHHHHHhcCCchH---------------HHHHHHHHHHhhcCCCccccccCCCCchHHHH
Confidence                   24688999999999999999999996               223334667778888765555542222 2899


Q ss_pred             HHHhhcCcCCCCCCCHHHHHH
Q 028134          151 VTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       151 li~~cl~~~p~~Rps~~ev~~  171 (213)
                      +|+.||..||.+||++.|+++
T Consensus       606 ~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  606 VMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             HHHHHHhcCcccCCCcHHHhc
Confidence            999999999999999999987


No 69 
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95  E-value=6.4e-29  Score=198.69  Aligned_cols=164  Identities=23%  Similarity=0.286  Sum_probs=120.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      .++.||+.||+|+|+++   |+|||||.+|||++.+|.+||+|||+++++....... .....-|.+|+|||.+.+. .|
T Consensus       222 c~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~-~T~rVvTLWYRpPELLLG~t~Y  297 (560)
T KOG0600|consen  222 CYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAP-YTSRVVTLWYRPPELLLGATSY  297 (560)
T ss_pred             HHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccCCCCcc-cccceEEeeccChHHhcCCccc
Confidence            37899999999999999   9999999999999999999999999999764443332 3456679999999999875 78


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhh-------hhccc------ccCCCCCHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV-------HLVDP------LLHGRYPRRCLNY  147 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~------~~~~~~~~~~~~~  147 (213)
                      +.+.|+||.|||+.||+.|+++|.+..+..+...+-..-. .+.+.-+.       ..+.+      .+++. -...+..
T Consensus       298 g~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcG-SP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~-~~~~~~~  375 (560)
T KOG0600|consen  298 GTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCG-SPTEDYWPVSKLPHATIFKPQQPYKRRLRET-FKDFPAS  375 (560)
T ss_pred             ccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhC-CCChhccccccCCcccccCCCCcccchHHHH-hccCCHH
Confidence            9999999999999999999999987665544332210000 00000011       00111      11111 1234556


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ..+|+..+|..||.+|.|+.++++
T Consensus       376 ~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  376 ALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             HHHHHHHHhccCccccccHHHHhc
Confidence            788999999999999999998875


No 70 
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.95  E-value=2.7e-28  Score=188.85  Aligned_cols=154  Identities=26%  Similarity=0.411  Sum_probs=116.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+.+   ++|+||+|+||+++.++.++++|||++........ .......++..|++||...+..++
T Consensus       107 ~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~  182 (261)
T cd05072         107 DFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFT  182 (261)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCce-eccCCCccceecCCHHHhccCCCC
Confidence            57889999999999998   99999999999999999999999999876432211 111223345679999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|+|++ |..||......                . ....+...........++..+.+++.+||..+|
T Consensus       183 ~~~Di~slG~~l~~l~t~g~~p~~~~~~~----------------~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  245 (261)
T cd05072         183 IKSDVWSFGILLYEIVTYGKIPYPGMSNS----------------D-VMSALQRGYRMPRMENCPDELYDIMKTCWKEKA  245 (261)
T ss_pred             hhhhhhhhHHHHHHHHccCCCCCCCCCHH----------------H-HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCc
Confidence            99999999999999998 89898532111                0 011111111112223455678999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++||+++++.+.|+.+
T Consensus       246 ~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         246 EERPTFDYLQSVLDDF  261 (261)
T ss_pred             ccCcCHHHHHHHHhcC
Confidence            9999999999998753


No 71 
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.95  E-value=2.5e-28  Score=188.93  Aligned_cols=153  Identities=29%  Similarity=0.442  Sum_probs=118.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.|+.|||+++   ++|+||+|+||+++.++.++++|||.+.........  .....++..|++||......++
T Consensus       108 ~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~  182 (261)
T cd05148         108 DMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL--SSDKKIPYKWTAPEAASHGTFS  182 (261)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCcccc--ccCCCCceEecCHHHHccCCCC
Confidence            57899999999999998   999999999999999999999999998754322111  1123346689999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+|+||+++|++++ |..||.....                 ......+........+..++..+.+++.+||..+|
T Consensus       183 ~~~DiwslG~~l~~l~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  245 (261)
T cd05148         183 TKSDVWSFGILLYEMFTYGQVPYPGMNN-----------------HEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEP  245 (261)
T ss_pred             chhhHHHHHHHHHHHHcCCCCCCCcCCH-----------------HHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCc
Confidence            99999999999999998 8888853221                 11111111222223345667789999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      .+|||++++++.|+.+
T Consensus       246 ~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         246 EDRPSFKALREELDNI  261 (261)
T ss_pred             hhCcCHHHHHHHHhcC
Confidence            9999999999999863


No 72 
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.95  E-value=3e-28  Score=179.56  Aligned_cols=162  Identities=30%  Similarity=0.389  Sum_probs=122.2

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCC-Cc------ccccccccccccCcc
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN-TH------VSTRVMGTYGYCAPE   73 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~------~~~~~~~~~~~~~Pe   73 (213)
                      |.|+.++++||.+||+.. +++.|+||||.||++...+.+++.|||.+....-.-. ..      .......+..|+|||
T Consensus       130 L~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPE  208 (302)
T KOG2345|consen  130 LWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPE  208 (302)
T ss_pred             HHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCch
Confidence            468999999999999984 6799999999999999999999999999875321110 00      012346788999999


Q ss_pred             cccc---CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHH
Q 028134           74 YAMS---GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVA  150 (213)
Q Consensus        74 ~~~~---~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (213)
                      .+..   ...+.++|||||||++|.||.|..||+.-.....              .-..++.+..............+.+
T Consensus       209 Lf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg--------------SlaLAv~n~q~s~P~~~~yse~l~~  274 (302)
T KOG2345|consen  209 LFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG--------------SLALAVQNAQISIPNSSRYSEALHQ  274 (302)
T ss_pred             heecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC--------------eEEEeeeccccccCCCCCccHHHHH
Confidence            8763   3567999999999999999999999973332111              1111122222222233457788999


Q ss_pred             HHHhhcCcCCCCCCCHHHHHHHHHHHh
Q 028134          151 VTAMCLNEEANFRPLINDIVVALDYLV  177 (213)
Q Consensus       151 li~~cl~~~p~~Rps~~ev~~~L~~l~  177 (213)
                      +|..|++.||.+||++.+++..++.+.
T Consensus       275 lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  275 LIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             HHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            999999999999999999999998875


No 73 
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.95  E-value=3.3e-28  Score=199.18  Aligned_cols=158  Identities=24%  Similarity=0.332  Sum_probs=121.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       241 ~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  317 (400)
T cd05105         241 SFTYQVARGMEFLASKN---CVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYT  317 (400)
T ss_pred             HHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCC
Confidence            57899999999999998   999999999999999999999999998754332222222233456789999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++||||||+++|+|++ |..||.......                .....+........+..++..+.+++..||+.+|
T Consensus       318 ~~~DiwSlGvil~ellt~g~~P~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  381 (400)
T cd05105         318 TLSDVWSYGILLWEIFSLGGTPYPGMIVDS----------------TFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEP  381 (400)
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCcccchhH----------------HHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCH
Confidence            99999999999999996 888886321110                1111111111222344567789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhh
Q 028134          161 NFRPLINDIVVALDYLVS  178 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~  178 (213)
                      ++||++.+|.+.|+.+..
T Consensus       382 ~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         382 EKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             hHCcCHHHHHHHHHHHcC
Confidence            999999999999998764


No 74 
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.95  E-value=1.4e-28  Score=189.72  Aligned_cols=170  Identities=21%  Similarity=0.243  Sum_probs=120.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      ++++||+.||+|||+++   |+||||||+|++++.+|.+||+|||+++........  ......|.+|+|||++.+. .|
T Consensus       124 ~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~--yt~evvTlWYRaPEvLlGs~~Y  198 (323)
T KOG0594|consen  124 SFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT--YTPEVVTLWYRAPEVLLGSTSY  198 (323)
T ss_pred             HHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchHHHhcCCccc--ccccEEEeeccCHHHhcCCCcC
Confidence            57999999999999999   999999999999999999999999999864432222  3446778999999999876 78


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhc-----ccccCCC-----CCH---HHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV-----DPLLHGR-----YPR---RCLNY  147 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~---~~~~~  147 (213)
                      +...||||+|||+.||++++..|.+..+......+-.... .+++..+..+.     +..+...     +..   .....
T Consensus       199 s~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lG-tP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~  277 (323)
T KOG0594|consen  199 STSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLG-TPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPD  277 (323)
T ss_pred             CCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcC-CCCccCCCCccccccccccCcCCCCccchHHhccccCcc
Confidence            9999999999999999999999976654322111100000 00011111111     0000000     001   11247


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHHH--HHHHh
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVVA--LDYLV  177 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~~--L~~l~  177 (213)
                      ..+++..|++.+|.+|.|++.++..  ++.+.
T Consensus       278 ~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  278 GIELLSKLLQYDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             HHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence            8899999999999999999999875  44443


No 75 
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.95  E-value=3.3e-28  Score=189.15  Aligned_cols=154  Identities=23%  Similarity=0.339  Sum_probs=116.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++++|||.......... .......++..|+|||.+.+..++
T Consensus       111 ~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~  186 (266)
T cd05064         111 GMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI-YTTMSGKSPVLWAAPEAIQYHHFS  186 (266)
T ss_pred             HHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccccch-hcccCCCCceeecCHHHHhhCCcc
Confidence            57899999999999998   99999999999999999999999998654211111 111112345679999999888999


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+||++|++++ |..||......                 ...+.+........+..++..+.+++..||+.+|
T Consensus       187 ~~~Di~slG~~l~ell~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p  249 (266)
T cd05064         187 SASDVWSFGIVMWEVMSYGERPYWDMSGQ-----------------DVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKER  249 (266)
T ss_pred             chhHHHHHHHHHHHHhcCCCCCcCcCCHH-----------------HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            99999999999999875 99998632211                 0111111111222345567789999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      .+||++.+|.+.|.++
T Consensus       250 ~~RP~~~~i~~~l~~~  265 (266)
T cd05064         250 GERPRFSQIHSILSKM  265 (266)
T ss_pred             hhCCCHHHHHHHHHhh
Confidence            9999999999998765


No 76 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.95  E-value=2.3e-28  Score=195.21  Aligned_cols=147  Identities=30%  Similarity=0.396  Sum_probs=114.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.||+.||+|||+++   ++||||||+||+++.++.++|+|||++......  ........++..|+|||.+.+..++
T Consensus        99 ~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~  173 (323)
T cd05571          99 FYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEYLAPEVLEDNDYG  173 (323)
T ss_pred             HHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccC--CCcccceecCccccChhhhcCCCCC
Confidence            46789999999999998   999999999999999999999999998642111  1112335688999999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|||++|..||......                .....+...  ...++......+.+++.+||+.||+
T Consensus       174 ~~~DiwSlG~il~elltg~~Pf~~~~~~----------------~~~~~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~  235 (323)
T cd05571         174 RAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------KLFELILME--EIRFPRTLSPEAKSLLAGLLKKDPK  235 (323)
T ss_pred             ccccCcccchhhhhhhcCCCCCCCCCHH----------------HHHHHHHcC--CCCCCCCCCHHHHHHHHHHccCCHH
Confidence            9999999999999999999999532110                001111111  1123445667889999999999999


Q ss_pred             CCC-----CHHHHHH
Q 028134          162 FRP-----LINDIVV  171 (213)
Q Consensus       162 ~Rp-----s~~ev~~  171 (213)
                      +||     ++.++++
T Consensus       236 ~R~~~~~~~~~~ll~  250 (323)
T cd05571         236 QRLGGGPEDAKEIME  250 (323)
T ss_pred             HcCCCCCCCHHHHHc
Confidence            999     7888875


No 77 
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.95  E-value=5.7e-28  Score=194.43  Aligned_cols=159  Identities=26%  Similarity=0.345  Sum_probs=119.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++++|||++................++..|++||.+.+..++
T Consensus       183 ~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  259 (343)
T cd05103         183 CYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT  259 (343)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCC
Confidence            57889999999999998   999999999999999999999999998754222211122223345679999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||.......                .....+........+......+.+++..||+.+|
T Consensus       260 ~~~Di~slG~~l~el~~~g~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p  323 (343)
T cd05103         260 IQSDVWSFGVLLWEIFSLGASPYPGVKIDE----------------EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEP  323 (343)
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCCccccH----------------HHHHHHhccCCCCCCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999996 888885322110                0111111111112223345678999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhc
Q 028134          161 NFRPLINDIVVALDYLVSQ  179 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~  179 (213)
                      ++||++.+|++.|+.+.+.
T Consensus       324 ~~Rps~~eil~~l~~~~~~  342 (343)
T cd05103         324 SQRPTFSELVEHLGNLLQA  342 (343)
T ss_pred             hhCcCHHHHHHHHHHHHhc
Confidence            9999999999999988753


No 78 
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.95  E-value=4.7e-28  Score=187.55  Aligned_cols=157  Identities=28%  Similarity=0.377  Sum_probs=115.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC--cccccccccccccCccccccCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT--HVSTRVMGTYGYCAPEYAMSGK   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~   79 (213)
                      +++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||++.........  .......++..|++||...+..
T Consensus       102 ~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  178 (262)
T cd05058         102 GFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQK  178 (262)
T ss_pred             HHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCc
Confidence            56789999999999998   999999999999999999999999998643221111  1111233466899999988888


Q ss_pred             CCCccceeeHHHHHHHHHhC-CCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           80 LTLKSDIYSFGVVLLELITG-RKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      ++.++|+||||+++|||++| ..||.....                 ......+........+..++..+.+++..||..
T Consensus       179 ~~~~~Di~slG~~l~el~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  241 (262)
T cd05058         179 FTTKSDVWSFGVLLWELMTRGAPPYPDVDS-----------------FDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHP  241 (262)
T ss_pred             cchHHHHHHHHHHHHHHHcCCCCCCCCCCH-----------------HHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCC
Confidence            89999999999999999995 555542110                 001111111111112233456789999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHhh
Q 028134          159 EANFRPLINDIVVALDYLVS  178 (213)
Q Consensus       159 ~p~~Rps~~ev~~~L~~l~~  178 (213)
                      +|++||++.+|++.|+.+..
T Consensus       242 ~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         242 KPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             ChhhCCCHHHHHHHHHHHhc
Confidence            99999999999999998754


No 79 
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.95  E-value=5.5e-28  Score=187.20  Aligned_cols=154  Identities=27%  Similarity=0.418  Sum_probs=116.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.|+.+||+++   ++|+||||+||+++.++.++|+|||++......... .......+..|++||...+..++
T Consensus       107 ~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~  182 (261)
T cd05068         107 DMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE-AREGAKFPIKWTAPEAALYNRFS  182 (261)
T ss_pred             HHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCccc-ccCCCcCceeccCccccccCCCC
Confidence            57899999999999998   999999999999999999999999998765322111 11112224579999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||.....                 ......++.......+..+...+.+++.+||+.+|
T Consensus       183 ~~~Di~slG~~l~el~t~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  245 (261)
T cd05068         183 IKSDVWSFGILLTEIVTYGRMPYPGMTN-----------------AEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDP  245 (261)
T ss_pred             chhhHHHHHHHHHHHHhcCCCCCCCCCH-----------------HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCc
Confidence            99999999999999998 8888853211                 11111111111122234456789999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++||++.++.+.|+.+
T Consensus       246 ~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         246 DDRPTFETLQWKLEDF  261 (261)
T ss_pred             ccCCCHHHHHHHHhcC
Confidence            9999999999998753


No 80 
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.95  E-value=4.5e-28  Score=188.69  Aligned_cols=153  Identities=27%  Similarity=0.377  Sum_probs=115.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++++|||++.....   .........+..|++||...+..++
T Consensus       116 ~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfgl~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~  189 (270)
T cd05047         116 HFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYT  189 (270)
T ss_pred             HHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCCCccccch---hhhccCCCCccccCChHHHccCCCC
Confidence            57889999999999998   99999999999999999999999998753211   0011112234579999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|+|++ |..||......                 .....+........+..+...+.+++.+||..+|
T Consensus       190 ~~~Di~slG~il~el~~~g~~pf~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  252 (270)
T cd05047         190 TNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----------------ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKP  252 (270)
T ss_pred             chhhHHHHHHHHHHHHcCCCCCccccCHH-----------------HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccCh
Confidence            99999999999999996 88888532110                 0111111111112233455678999999999999


Q ss_pred             CCCCCHHHHHHHHHHHh
Q 028134          161 NFRPLINDIVVALDYLV  177 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~  177 (213)
                      .+||++.++++.|+.+.
T Consensus       253 ~~Rps~~~il~~l~~~~  269 (270)
T cd05047         253 YERPSFAQILVSLNRML  269 (270)
T ss_pred             hhCCCHHHHHHHHHHhh
Confidence            99999999999998875


No 81 
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.95  E-value=3.5e-28  Score=203.50  Aligned_cols=150  Identities=25%  Similarity=0.314  Sum_probs=116.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++||||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       173 ~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  249 (478)
T PTZ00267        173 LLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYS  249 (478)
T ss_pred             HHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCC
Confidence            46789999999999998   999999999999999999999999998764332222223345688999999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                ..+..+.... ....+..+...+.++|..||..+|+
T Consensus       250 ~~~Dv~slG~~l~el~tg~~Pf~~~~~~----------------~~~~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~  312 (478)
T PTZ00267        250 KKADMWSLGVILYELLTLHRPFKGPSQR----------------EIMQQVLYGK-YDPFPCPVSSGMKALLDPLLSKNPA  312 (478)
T ss_pred             cHHhHHHHHHHHHHHHhCCCCCCCCCHH----------------HHHHHHHhCC-CCCCCccCCHHHHHHHHHHhccChh
Confidence            9999999999999999999998632110                1111111111 1122334567899999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.+++.
T Consensus       313 ~Rps~~~~l~  322 (478)
T PTZ00267        313 LRPTTQQLLH  322 (478)
T ss_pred             hCcCHHHHHh
Confidence            9999999865


No 82 
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.95  E-value=6.1e-28  Score=187.58  Aligned_cols=153  Identities=27%  Similarity=0.398  Sum_probs=116.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC-----ceEEeeeecccccCCCCCCcccccccccccccCccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF-----NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~-----~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   76 (213)
                      +++.|++.|++|||+++   ++|+||+|+||+++.++     .++++|||++.................+..|++||.+.
T Consensus       110 ~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  186 (269)
T cd05044         110 DICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLL  186 (269)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHc
Confidence            47889999999999998   99999999999998877     89999999986543222111222334567899999998


Q ss_pred             cCCCCCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhh
Q 028134           77 SGKLTLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMC  155 (213)
Q Consensus        77 ~~~~~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  155 (213)
                      +..++.++|+||||+++|+|++ |..||......                 .....+........+...+..+.+++.+|
T Consensus       187 ~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~  249 (269)
T cd05044         187 DGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ-----------------EVLQHVTAGGRLQKPENCPDKIYQLMTNC  249 (269)
T ss_pred             cCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH-----------------HHHHHHhcCCccCCcccchHHHHHHHHHH
Confidence            8889999999999999999998 99888522111                 11111111112223445667889999999


Q ss_pred             cCcCCCCCCCHHHHHHHHH
Q 028134          156 LNEEANFRPLINDIVVALD  174 (213)
Q Consensus       156 l~~~p~~Rps~~ev~~~L~  174 (213)
                      |..+|++||++++|++.|+
T Consensus       250 l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         250 WAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             cCCCcccCCCHHHHHHHHh
Confidence            9999999999999999886


No 83 
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.95  E-value=5.4e-28  Score=186.57  Aligned_cols=153  Identities=29%  Similarity=0.407  Sum_probs=118.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||+|+||+++.++.++|+|||.+................++..|++||......++
T Consensus       109 ~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  185 (262)
T cd00192         109 SFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFT  185 (262)
T ss_pred             HHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcc
Confidence            57899999999999998   999999999999999999999999998765433221222334567789999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|+++|++++ |..||.....                 ......+........+..++..+.+++..||+.+|
T Consensus       186 ~~~Di~slG~il~~l~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  248 (262)
T cd00192         186 SKSDVWSFGVLLWEIFTLGATPYPGLSN-----------------EEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDP  248 (262)
T ss_pred             hhhccHHHHHHHHHHHhcCCCCCCCCCH-----------------HHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCc
Confidence            99999999999999998 5888864311                 01111111122223345567889999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 028134          161 NFRPLINDIVVALD  174 (213)
Q Consensus       161 ~~Rps~~ev~~~L~  174 (213)
                      .+||++.++++.|+
T Consensus       249 ~~Rps~~~l~~~l~  262 (262)
T cd00192         249 EDRPTFSELVERLE  262 (262)
T ss_pred             ccCcCHHHHHHhhC
Confidence            99999999998773


No 84 
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=4.6e-28  Score=191.35  Aligned_cols=159  Identities=27%  Similarity=0.379  Sum_probs=114.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcc-c-ccccccccccCcccccc--
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-S-TRVMGTYGYCAPEYAMS--   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~-~-~~~~~~~~~~~Pe~~~~--   77 (213)
                      .|++++++||.|||.+|   .+|||||+.|||++.+|.++|+|||.+-.....+.... . ..+.+++.|++||++..  
T Consensus       130 ~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~  206 (516)
T KOG0582|consen  130 TILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQL  206 (516)
T ss_pred             HHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcc
Confidence            36789999999999999   99999999999999999999999998655433332211 1 45679999999999653  


Q ss_pred             CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcC
Q 028134           78 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLN  157 (213)
Q Consensus        78 ~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  157 (213)
                      .+|+.++||||||+...|+.+|..||...-...   ++..-.     ++............+........|.+++..||.
T Consensus       207 ~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk---vLl~tL-----qn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~  278 (516)
T KOG0582|consen  207 HGYDFKADIWSFGITACELAHGHAPFSKYPPMK---VLLLTL-----QNDPPTLLTSGLDKDEDKKFSKSFREMIALCLV  278 (516)
T ss_pred             cCccchhhhhhhhHHHHHHhcCCCCcccCChHH---HHHHHh-----cCCCCCcccccCChHHhhhhcHHHHHHHHHHhh
Confidence            478999999999999999999999996222211   110000     000000000011111223455689999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 028134          158 EEANFRPLINDIVV  171 (213)
Q Consensus       158 ~~p~~Rps~~ev~~  171 (213)
                      .||.+|||+.++++
T Consensus       279 kDP~kRptAskLlk  292 (516)
T KOG0582|consen  279 KDPSKRPTASKLLK  292 (516)
T ss_pred             cCcccCCCHHHHhc
Confidence            99999999999876


No 85 
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.95  E-value=4.6e-28  Score=191.74  Aligned_cols=156  Identities=25%  Similarity=0.353  Sum_probs=118.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+++   ++|+||||+||+++.++.++++|||++................++..|++||.+.+..++
T Consensus       145 ~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  221 (302)
T cd05055         145 SFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYT  221 (302)
T ss_pred             HHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCC
Confidence            57889999999999998   999999999999999999999999998754332221122223456789999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|+++|++++ |..||.......                .....+........+......+.+++.+||..+|
T Consensus       222 ~~~DiwslGvil~el~t~g~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  285 (302)
T cd05055         222 FESDVWSYGILLWEIFSLGSNPYPGMPVDS----------------KFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADP  285 (302)
T ss_pred             cHhHHHHHHHHHHHHHhCCCCCcCCCCchH----------------HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCc
Confidence            99999999999999998 898885322110                1111111111112223345679999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++||++.++++.|+++
T Consensus       286 ~~Rpt~~ell~~l~~~  301 (302)
T cd05055         286 LKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             hhCcCHHHHHHHHHhh
Confidence            9999999999999875


No 86 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.95  E-value=2.7e-28  Score=193.85  Aligned_cols=147  Identities=29%  Similarity=0.339  Sum_probs=112.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++||||||+||+++.++.++|+|||++......  ........++..|+|||.+.+..++
T Consensus        97 ~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~  171 (312)
T cd05585          97 FYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKD--DDKTNTFCGTPEYLAPELLLGHGYT  171 (312)
T ss_pred             HHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccC--CCccccccCCcccCCHHHHcCCCCC
Confidence            47889999999999998   999999999999999999999999998642111  1122334678999999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....++..  ...++......+.+++..||+.||.
T Consensus       172 ~~~DvwslGvil~el~tg~~pf~~~~~~----------------~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dp~  233 (312)
T cd05585         172 KAVDWWTLGVLLYEMLTGLPPFYDENVN----------------EMYRKILQE--PLRFPDGFDRDAKDLLIGLLSRDPT  233 (312)
T ss_pred             CccceechhHHHHHHHhCCCCcCCCCHH----------------HHHHHHHcC--CCCCCCcCCHHHHHHHHHHcCCCHH
Confidence            9999999999999999999999632110                111111111  1123445667889999999999999


Q ss_pred             CCCC---HHHHHH
Q 028134          162 FRPL---INDIVV  171 (213)
Q Consensus       162 ~Rps---~~ev~~  171 (213)
                      +||+   +.+++.
T Consensus       234 ~R~~~~~~~e~l~  246 (312)
T cd05585         234 RRLGYNGAQEIKN  246 (312)
T ss_pred             HcCCCCCHHHHHc
Confidence            9985   555554


No 87 
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.95  E-value=6.7e-28  Score=189.91  Aligned_cols=160  Identities=25%  Similarity=0.377  Sum_probs=115.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       134 ~~~~~i~~al~~LH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  210 (296)
T cd05051         134 YMATQIASGMRYLESLN---FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFT  210 (296)
T ss_pred             HHHHHHHHHHHHHHHcC---ccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCC
Confidence            57899999999999998   999999999999999999999999998754332222223334456789999998888889


Q ss_pred             CccceeeHHHHHHHHHh--CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           82 LKSDIYSFGVVLLELIT--GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      .++|+||||+++|++++  +..||.....   .......       .....-.........+..++.++.+++.+||+.+
T Consensus       211 ~~~Dv~slG~~l~el~~~~~~~p~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  280 (296)
T cd05051         211 TKSDVWAFGVTLWEILTLCREQPYEHLTD---QQVIENA-------GHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRD  280 (296)
T ss_pred             ccchhhhhHHHHHHHHhcCCCCCCCCcCh---HHHHHHH-------HhccccccccccCCCccCCCHHHHHHHHHHhccC
Confidence            99999999999999987  5666642211   1111000       0000000111111123345578999999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 028134          160 ANFRPLINDIVVALD  174 (213)
Q Consensus       160 p~~Rps~~ev~~~L~  174 (213)
                      |++||++.+|++.|+
T Consensus       281 p~~Rpt~~el~~~L~  295 (296)
T cd05051         281 EEDRPTFREIHLFLQ  295 (296)
T ss_pred             hhcCCCHHHHHHHhc
Confidence            999999999999886


No 88 
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.95  E-value=6.9e-28  Score=194.65  Aligned_cols=151  Identities=23%  Similarity=0.340  Sum_probs=111.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS----   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~----   77 (213)
                      +++.||+.||+|||+++   ++|+|||++||+++.++.++|+|||++.......  .......++..|++||.+..    
T Consensus       172 ~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~  246 (353)
T PLN00034        172 DVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM--DPCNSSVGTIAYMSPERINTDLNH  246 (353)
T ss_pred             HHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc--ccccccccCccccCcccccccccc
Confidence            57899999999999998   9999999999999999999999999987542211  11223467889999998742    


Q ss_pred             -CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhc
Q 028134           78 -GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCL  156 (213)
Q Consensus        78 -~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  156 (213)
                       ...+.++|||||||++|+|++|..||.........              .....+........+..+...+.++|..||
T Consensus       247 ~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  312 (353)
T PLN00034        247 GAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWA--------------SLMCAICMSQPPEAPATASREFRHFISCCL  312 (353)
T ss_pred             CcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHH--------------HHHHHHhccCCCCCCCccCHHHHHHHHHHc
Confidence             23346899999999999999999999732211100              000001011112223456678999999999


Q ss_pred             CcCCCCCCCHHHHHH
Q 028134          157 NEEANFRPLINDIVV  171 (213)
Q Consensus       157 ~~~p~~Rps~~ev~~  171 (213)
                      +.||++||++.|+++
T Consensus       313 ~~~P~~Rpt~~ell~  327 (353)
T PLN00034        313 QREPAKRWSAMQLLQ  327 (353)
T ss_pred             cCChhhCcCHHHHhc
Confidence            999999999999986


No 89 
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.95  E-value=6.2e-28  Score=187.92  Aligned_cols=155  Identities=25%  Similarity=0.380  Sum_probs=116.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.|++|||+++   ++|+||||+||+++.++.++++|||++................++..|++||.+.+..++
T Consensus       117 ~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  193 (273)
T cd05074         117 RFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYT  193 (273)
T ss_pred             HHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccc
Confidence            57899999999999998   999999999999999999999999998754322211112223345679999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||......   .              ....+........+..+...+.+++.+||..+|
T Consensus       194 ~~sDi~slG~il~el~~~g~~p~~~~~~~---~--------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p  256 (273)
T cd05074         194 THSDVWAFGVTMWEIMTRGQTPYAGVENS---E--------------IYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEP  256 (273)
T ss_pred             hhhhhHHHHHHHHHHhhCCCCCCCCCCHH---H--------------HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999998 77887522111   0              000110000111123455689999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++||++.++++.|+.+
T Consensus       257 ~~Rps~~~~~~~l~~~  272 (273)
T cd05074         257 KCRPSFQHLRDQLELI  272 (273)
T ss_pred             hhCcCHHHHHHHHHhh
Confidence            9999999999999875


No 90 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.95  E-value=4.4e-28  Score=190.18  Aligned_cols=166  Identities=21%  Similarity=0.257  Sum_probs=114.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++........ .......++..|+|||.+.+..++
T Consensus       104 ~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~  179 (287)
T cd07848         104 SYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-ANYTEYVATRWYRSPELLLGAPYG  179 (287)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCccccccccc-ccccccccccccCCcHHHcCCCCC
Confidence            47899999999999998   99999999999999999999999999876422211 112234578899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchh-hchhhhhh-------hhhhhhhhcccccC------CCCCHHHHHH
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV-SWSRPFLK-------DQKKFVHLVDPLLH------GRYPRRCLNY  147 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~------~~~~~~~~~~  147 (213)
                      .++|+||+||++|+|++|..||...........+ ....+...       ..........+...      ..........
T Consensus       180 ~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  259 (287)
T cd07848         180 KAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGV  259 (287)
T ss_pred             CchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHH
Confidence            9999999999999999999999743321110000 00000000       00000000000000      0111234567


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      +.+++.+||+.||++|||++++++
T Consensus       260 ~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         260 LLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             HHHHHHHHccCCcccCCCHHHHhc
Confidence            999999999999999999999874


No 91 
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.95  E-value=8.3e-28  Score=186.65  Aligned_cols=156  Identities=22%  Similarity=0.287  Sum_probs=119.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||+|+||+++.++.++++|||++.......  .......++..|++||.+.+..++
T Consensus       110 ~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~  184 (267)
T cd08228         110 KYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYN  184 (267)
T ss_pred             HHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccchh--HHHhcCCCCccccChhhhccCCCC
Confidence            57889999999999998   9999999999999999999999999887542211  111223567789999998888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccc-cCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL-LHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|+++|++++|..||.......               ......+... ............+.+++.+||..+|
T Consensus       185 ~~~Di~slG~~l~el~~g~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  249 (267)
T cd08228         185 FKSDIWSLGCLLYEMAALQSPFYGDKMNL---------------FSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDP  249 (267)
T ss_pred             chhhHHHHHHHHHHHhcCCCCCccccccH---------------HHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCc
Confidence            99999999999999999999985322110               0111111111 1111223456789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHh
Q 028134          161 NFRPLINDIVVALDYLV  177 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~  177 (213)
                      ++||++.+|++.|+++.
T Consensus       250 ~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         250 DQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             ccCcCHHHHHHHHHHhc
Confidence            99999999999998763


No 92 
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.95  E-value=4.7e-28  Score=190.18  Aligned_cols=154  Identities=24%  Similarity=0.320  Sum_probs=115.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||.++   ++|+||+|+||+++.++.++|+|||++.................+..|++||...+..++
T Consensus       134 ~~~~~i~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  210 (288)
T cd05050         134 CIAKQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYT  210 (288)
T ss_pred             HHHHHHHHHHHHHHhCC---eecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCC
Confidence            58899999999999998   999999999999999999999999998754322211112222345679999998888899


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+|||||++|+|++ |..||......                 .....+........+..++..+.+++.+||+.+|
T Consensus       211 ~~~Dv~slG~il~el~~~~~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  273 (288)
T cd05050         211 TESDVWAYGVVLWEIFSYGMQPYYGMAHE-----------------EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLP  273 (288)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCCHH-----------------HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCc
Confidence            99999999999999997 77777421110                 0111111111112233456789999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDY  175 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~  175 (213)
                      ++||++.|+++.|++
T Consensus       274 ~~Rpt~~el~~~l~~  288 (288)
T cd05050         274 SDRPSFASINRILQR  288 (288)
T ss_pred             ccCCCHHHHHHHhhC
Confidence            999999999999873


No 93 
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.95  E-value=8.4e-28  Score=189.59  Aligned_cols=161  Identities=24%  Similarity=0.366  Sum_probs=115.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.................+..|++||...+..++
T Consensus       134 ~~~~~i~~al~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  210 (296)
T cd05095         134 FMATQIASGMKYLSSLN---FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFT  210 (296)
T ss_pred             HHHHHHHHHHHHHHHCC---eecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCcc
Confidence            57899999999999998   999999999999999999999999998754322211112223345679999988888899


Q ss_pred             CccceeeHHHHHHHHHh--CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           82 LKSDIYSFGVVLLELIT--GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      .++|+|||||++|||++  |..||.......   ..........       ..........+..+...+.+++.+||+.+
T Consensus       211 ~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~---~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~li~~cl~~~  280 (296)
T cd05095         211 TASDVWAFGVTLWEILTLCKEQPYSQLSDEQ---VIENTGEFFR-------DQGRQVYLPKPALCPDSLYKLMLSCWRRN  280 (296)
T ss_pred             chhhhhHHHHHHHHHHHhCCCCCccccChHH---HHHHHHHHHh-------hccccccCCCCCCCCHHHHHHHHHHcCCC
Confidence            99999999999999998  667775221111   1110000000       00001111123345678999999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 028134          160 ANFRPLINDIVVALDY  175 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~  175 (213)
                      |.+||++.+|++.|++
T Consensus       281 p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         281 AKERPSFQEIHATLLE  296 (296)
T ss_pred             cccCCCHHHHHHHHhC
Confidence            9999999999998863


No 94 
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.95  E-value=7.1e-28  Score=190.72  Aligned_cols=158  Identities=27%  Similarity=0.379  Sum_probs=118.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.....   .........+..|++||...+..++
T Consensus       128 ~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~  201 (303)
T cd05088         128 HFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYT  201 (303)
T ss_pred             HHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcEEeCccccCcccch---hhhcccCCCcccccCHHHHhccCCc
Confidence            47889999999999998   99999999999999999999999999853211   0011112235679999988887888


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||.......                 ....+........+......+.+++.+||+.+|
T Consensus       202 ~~~Di~slG~il~ellt~g~~p~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  264 (303)
T cd05088         202 TNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-----------------LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKP  264 (303)
T ss_pred             ccccchhhhhHHHHHHhcCCCCcccCChHH-----------------HHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999998 998885221110                 011111111111223355678999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhccCC
Q 028134          161 NFRPLINDIVVALDYLVSQRDS  182 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~~~~  182 (213)
                      ++||++.++++.|..+......
T Consensus       265 ~~Rp~~~~il~~l~~~~~~~~~  286 (303)
T cd05088         265 YERPSFAQILVSLNRMLEERKT  286 (303)
T ss_pred             hhCcCHHHHHHHHHHHHHhhhh
Confidence            9999999999999988776653


No 95 
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.95  E-value=7.8e-28  Score=185.17  Aligned_cols=153  Identities=26%  Similarity=0.371  Sum_probs=115.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||+|+||+++.++.++|+|||.+.................+..|++||.+.+..++
T Consensus        97 ~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  173 (251)
T cd05041          97 QMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYT  173 (251)
T ss_pred             HHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCC
Confidence            46789999999999998   999999999999999999999999998754221111111112235579999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||......                 .....+........+..++..+.+++.+||..+|
T Consensus       174 ~~~Di~slG~i~~~l~t~~~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  236 (251)
T cd05041         174 SESDVWSYGILLWETFSLGDTPYPGMSNQ-----------------QTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDP  236 (251)
T ss_pred             cchhHHHHHHHHHHHHhccCCCCccCCHH-----------------HHHHHHhcCCCCCCCccCCHHHHHHHHHHhccCh
Confidence            99999999999999998 78787533211                 1111122222223344566789999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 028134          161 NFRPLINDIVVALD  174 (213)
Q Consensus       161 ~~Rps~~ev~~~L~  174 (213)
                      ++||++.|+++.|+
T Consensus       237 ~~Rp~~~ell~~l~  250 (251)
T cd05041         237 ENRPSFSEIYNELQ  250 (251)
T ss_pred             hhCcCHHHHHHHhh
Confidence            99999999999886


No 96 
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=99.95  E-value=6.8e-28  Score=190.01  Aligned_cols=160  Identities=26%  Similarity=0.380  Sum_probs=114.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++................++..|++||...+..++
T Consensus       133 ~i~~~i~~al~~lH~~~---i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  209 (295)
T cd05097         133 YMAVQIASGMKYLASLN---FVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFT  209 (295)
T ss_pred             HHHHHHHHHHHHHHhcC---eeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcC
Confidence            57899999999999998   999999999999999999999999998754332222222233446789999998888899


Q ss_pred             CccceeeHHHHHHHHHh--CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           82 LKSDIYSFGVVLLELIT--GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      .++|+||||+++++|++  +..||.......   .........       ...........+..++..+.+++.+||..+
T Consensus       210 ~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~---~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  279 (295)
T cd05097         210 TASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ---VIENTGEFF-------RNQGRQIYLSQTPLCPSPVFKLMMRCWSRD  279 (295)
T ss_pred             chhhHHHHHHHHHHHHHcCCCCCCcccChHH---HHHHHHHhh-------hhccccccCCCCCCCCHHHHHHHHHHcCCC
Confidence            99999999999999988  555665321111   110000000       000011111112335568999999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 028134          160 ANFRPLINDIVVALD  174 (213)
Q Consensus       160 p~~Rps~~ev~~~L~  174 (213)
                      |++||++.+|++.|+
T Consensus       280 p~~RPs~~~i~~~l~  294 (295)
T cd05097         280 IKDRPTFNKIHHFLR  294 (295)
T ss_pred             chhCcCHHHHHHHHh
Confidence            999999999999886


No 97 
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.95  E-value=1.3e-27  Score=186.94  Aligned_cols=158  Identities=27%  Similarity=0.366  Sum_probs=120.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||.+.................+..|++||......++
T Consensus       113 ~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  189 (279)
T cd05057         113 NWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYT  189 (279)
T ss_pred             HHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcC
Confidence            57899999999999998   999999999999999999999999998764322211111112234679999988888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|+++|++++ |..||.....                 ..+...+........+..+...+.+++.+||..+|
T Consensus       190 ~~~Di~slG~~l~el~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p  252 (279)
T cd05057         190 HKSDVWSYGVTVWELMTFGAKPYEGIPA-----------------VEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDA  252 (279)
T ss_pred             chhhHHHHHHHHHHHhcCCCCCCCCCCH-----------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999998 9999863221                 11111222222222334456678999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhc
Q 028134          161 NFRPLINDIVVALDYLVSQ  179 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~  179 (213)
                      +.||++.++++.|..+.+.
T Consensus       253 ~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         253 ESRPTFKELINEFSKMARD  271 (279)
T ss_pred             hhCCCHHHHHHHHHHHHhC
Confidence            9999999999999998664


No 98 
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.95  E-value=9e-28  Score=185.89  Aligned_cols=153  Identities=30%  Similarity=0.460  Sum_probs=117.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||.+......... ......++..|++||...+..++
T Consensus       106 ~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~  181 (260)
T cd05070         106 DMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFT  181 (260)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCcccc-cccCCCCCccccChHHHhcCCCc
Confidence            57899999999999998   999999999999999999999999998754322111 11122345679999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||.....                 ......+........+...+..+.+++.+||..+|
T Consensus       182 ~~~Di~slG~~l~~l~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  244 (260)
T cd05070         182 IKSDVWSFGILLTELVTKGRVPYPGMNN-----------------REVLEQVERGYRMPCPQDCPISLHELMLQCWKKDP  244 (260)
T ss_pred             chhhhHHHHHHHHHHHhcCCCCCCCCCH-----------------HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCc
Confidence            99999999999999998 8888853211                 11111111222223344566789999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDY  175 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~  175 (213)
                      ++|||++++.+.|+.
T Consensus       245 ~~Rpt~~~l~~~l~~  259 (260)
T cd05070         245 EERPTFEYLQSFLED  259 (260)
T ss_pred             ccCcCHHHHHHHHhc
Confidence            999999999998874


No 99 
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=5.8e-28  Score=197.65  Aligned_cols=167  Identities=26%  Similarity=0.298  Sum_probs=118.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.||+.||.|||+++   ++||||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       189 ~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  265 (392)
T PHA03207        189 TIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYC  265 (392)
T ss_pred             HHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCC
Confidence            57899999999999998   999999999999999999999999998754333322223345689999999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh---------hh----hhhhhhcccccCCCC--C-----
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK---------DQ----KKFVHLVDPLLHGRY--P-----  141 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---------~~----~~~~~~~~~~~~~~~--~-----  141 (213)
                      .++|+||+||++|+|++|..||...........+......+.         ..    ..... .....+..+  +     
T Consensus       266 ~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  344 (392)
T PHA03207        266 AKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQ-YAIVLRPPYTIPPVIRK  344 (392)
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHh-hcccccCCccccchhhc
Confidence            999999999999999999999965433221111110000000         00    00000 011111111  0     


Q ss_pred             HHHHHHHHHHHHhhcCcCCCCCCCHHHHHHH
Q 028134          142 RRCLNYAVAVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       142 ~~~~~~~~~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                      ......+.++|..||..+|++||++.|++..
T Consensus       345 ~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        345 YGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             cCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            1234578899999999999999999999863


No 100
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.95  E-value=1.5e-27  Score=196.13  Aligned_cols=162  Identities=21%  Similarity=0.204  Sum_probs=116.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC--CCceEEeeeecccccCCCCCCcccccccccccccCccccccCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN--DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~   79 (213)
                      +++.||+.||.+||+.+   |||+||||+|||+..  ...+||+|||.++......     ...+....|+|||++.+.+
T Consensus       293 ~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v-----ytYiQSRfYRAPEVILGlp  364 (586)
T KOG0667|consen  293 KFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV-----YTYIQSRFYRAPEVILGLP  364 (586)
T ss_pred             HHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccccCCcc-----eeeeeccccccchhhccCC
Confidence            47899999999999998   999999999999954  3478999999998642222     2456677899999999999


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhch---------------hhhhhh-h---------h--------
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWS---------------RPFLKD-Q---------K--------  126 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~---------------~~~~~~-~---------~--------  126 (213)
                      |+.+.||||||||+.||++|.+.|.+..+.+....+.-.               ..++.. .         .        
T Consensus       365 Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~  444 (586)
T KOG0667|consen  365 YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSP  444 (586)
T ss_pred             CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccch
Confidence            999999999999999999999888665544332211100               000000 0         0        


Q ss_pred             hhhh----hcccccCC--------CCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          127 KFVH----LVDPLLHG--------RYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       127 ~~~~----~~~~~~~~--------~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ....    ..+....+        .........+.+++.+||++||.+|+|+.+.++
T Consensus       445 ~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~  501 (586)
T KOG0667|consen  445 EVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALN  501 (586)
T ss_pred             hhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            0000    01111111        111244567899999999999999999999987


No 101
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.95  E-value=7.3e-28  Score=189.23  Aligned_cols=156  Identities=26%  Similarity=0.385  Sum_probs=117.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       123 ~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~  199 (288)
T cd05061         123 QMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFT  199 (288)
T ss_pred             HHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCC
Confidence            47889999999999998   999999999999999999999999998754322221112223345679999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+||++|++++ |..||......                 .....+........+..+...+.+++.+||+.+|
T Consensus       200 ~~~DvwslG~~l~el~~~~~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  262 (288)
T cd05061         200 TSSDMWSFGVVLWEITSLAEQPYQGLSNE-----------------QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNP  262 (288)
T ss_pred             hHhHHHHHHHHHHHHHhCCCCCCCCCCHH-----------------HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999998 67787521110                 1111111111112234456789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHh
Q 028134          161 NFRPLINDIVVALDYLV  177 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~  177 (213)
                      ++||++.++++.|+...
T Consensus       263 ~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         263 KMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             hHCcCHHHHHHHHHhhc
Confidence            99999999999998875


No 102
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.95  E-value=7.9e-28  Score=196.93  Aligned_cols=157  Identities=24%  Similarity=0.338  Sum_probs=120.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       243 ~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  319 (401)
T cd05107         243 GFSYQVANGMEFLASKN---CVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYT  319 (401)
T ss_pred             HHHHHHHHHHHHHhcCC---cCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCC
Confidence            47789999999999988   999999999999999999999999998754222211112233456789999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|||++ |..||.....                .......+....+...+..+...+.+++..||..+|
T Consensus       320 ~~~DvwslGvil~e~l~~g~~P~~~~~~----------------~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P  383 (401)
T cd05107         320 TLSDVWSFGILLWEIFTLGGTPYPELPM----------------NEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKF  383 (401)
T ss_pred             cHhHHHHHHHHHHHHHHcCCCCCCCCCc----------------hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999998 7888753211                111112222222222344566789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHh
Q 028134          161 NFRPLINDIVVALDYLV  177 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~  177 (213)
                      .+||++++|++.|+.+.
T Consensus       384 ~~RPs~~ell~~L~~~~  400 (401)
T cd05107         384 EIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             hHCcCHHHHHHHHHHHh
Confidence            99999999999999875


No 103
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.95  E-value=2e-27  Score=184.43  Aligned_cols=157  Identities=23%  Similarity=0.266  Sum_probs=118.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|+++|++|||+++   ++|+||+|+||+++.++.++++|||.+........  ......++..|++||.+.+..++
T Consensus       110 ~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~  184 (267)
T cd08229         110 KYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYN  184 (267)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhccccCCc--ccccccCCcCccCHHHhcCCCcc
Confidence            56889999999999998   99999999999999999999999998775422211  11234567789999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++|++++|..||....... .             .....+................+.+++.+||..+|+
T Consensus       185 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  250 (267)
T cd08229         185 FKSDIWSLGCLLYEMAALQSPFYGDKMNL-Y-------------SLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPE  250 (267)
T ss_pred             chhhHHHHHHHHHHHHhCCCCcccccchH-H-------------HHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcc
Confidence            99999999999999999999985322110 0             000001111111111234667899999999999999


Q ss_pred             CCCCHHHHHHHHHHHh
Q 028134          162 FRPLINDIVVALDYLV  177 (213)
Q Consensus       162 ~Rps~~ev~~~L~~l~  177 (213)
                      +|||+.+|++.++++.
T Consensus       251 ~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         251 KRPDITYVYDVAKRMH  266 (267)
T ss_pred             cCCCHHHHHHHHhhhc
Confidence            9999999999998764


No 104
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.95  E-value=1.3e-27  Score=184.99  Aligned_cols=153  Identities=30%  Similarity=0.471  Sum_probs=116.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||++......... ......++..|++||...+..++
T Consensus       106 ~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~  181 (260)
T cd05069         106 DMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFT  181 (260)
T ss_pred             HHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCccc-ccCCCccchhhCCHHHhccCCcC
Confidence            57889999999999998   999999999999999999999999998754222111 11122345679999988888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||......                ... ..+........+...+..+.+++.+||..+|
T Consensus       182 ~~~Di~slG~~l~el~t~g~~p~~~~~~~----------------~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  244 (260)
T cd05069         182 IKSDVWSFGILLTELVTKGRVPYPGMVNR----------------EVL-EQVERGYRMPCPQGCPESLHELMKLCWKKDP  244 (260)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCCCCHH----------------HHH-HHHHcCCCCCCCcccCHHHHHHHHHHccCCc
Confidence            99999999999999998 88888632111                001 1111111122234556789999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDY  175 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~  175 (213)
                      ++||++++|++.|+.
T Consensus       245 ~~Rp~~~~i~~~l~~  259 (260)
T cd05069         245 DERPTFEYIQSFLED  259 (260)
T ss_pred             ccCcCHHHHHHHHhc
Confidence            999999999999875


No 105
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.95  E-value=1.7e-27  Score=184.77  Aligned_cols=155  Identities=28%  Similarity=0.435  Sum_probs=117.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||.+........ .......++..|++||...+..++
T Consensus       106 ~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~  181 (262)
T cd05071         106 DMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFT  181 (262)
T ss_pred             HHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccc-ccccCCcccceecCHhHhccCCCC
Confidence            57899999999999998   99999999999999999999999999875432221 111223355679999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|+++|++++ |..||......                 .....+........+..++..+.+++.+||+.+|
T Consensus       182 ~~~DvwslG~~l~ellt~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  244 (262)
T cd05071         182 IKSDVWSFGILLTELTTKGRVPYPGMVNR-----------------EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP  244 (262)
T ss_pred             chhhHHHHHHHHHHHHcCCCCCCCCCChH-----------------HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCc
Confidence            99999999999999999 78787532111                 0111111111122234566788999999999999


Q ss_pred             CCCCCHHHHHHHHHHHh
Q 028134          161 NFRPLINDIVVALDYLV  177 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~  177 (213)
                      ++||+++++++.|+...
T Consensus       245 ~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         245 EERPTFEYLQAFLEDYF  261 (262)
T ss_pred             ccCCCHHHHHHHHHHhc
Confidence            99999999999998753


No 106
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=1e-27  Score=196.01  Aligned_cols=166  Identities=22%  Similarity=0.224  Sum_probs=113.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   |+||||||+||+++.++.++|+|||++....... ........++..|++||.+.+..++
T Consensus       186 ~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~  261 (391)
T PHA03212        186 AIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-ANKYYGWAGTIATNAPELLARDPYG  261 (391)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccc-ccccccccCccCCCChhhhcCCCCC
Confidence            57899999999999998   9999999999999999999999999986422111 1122235689999999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCcc----chhhchhhhh---------hhhhhhhhhc---------ccccCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQ----NLVSWSRPFL---------KDQKKFVHLV---------DPLLHGR  139 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~---------~~~~~~~~~~---------~~~~~~~  139 (213)
                      .++|+||+||++|+|++|..|+.........    ..+.......         ..........         .+..+..
T Consensus       262 ~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (391)
T PHA03212        262 PAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPL  341 (391)
T ss_pred             cHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCC
Confidence            9999999999999999999876432211110    0000000000         0000011000         0000110


Q ss_pred             C--CHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          140 Y--PRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       140 ~--~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      +  ....+..+.+++.+||+.||.+|||++|+++
T Consensus       342 ~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        342 WTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             HHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence            0  0134567899999999999999999999985


No 107
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.95  E-value=1.2e-27  Score=184.71  Aligned_cols=151  Identities=25%  Similarity=0.347  Sum_probs=112.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||+|+||+++.++.++++|||.+......... ......++..|++||.+.+..++
T Consensus       104 ~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~  179 (256)
T cd05114         104 SMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-SSSGAKFPVKWSPPEVFNFSKYS  179 (256)
T ss_pred             HHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCcee-ccCCCCCchhhCChhhcccCccc
Confidence            57889999999999998   999999999999999999999999988753221111 11112345579999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|+++|++++ |..||......                .....+.. ......+......+.+++.+||..+|
T Consensus       180 ~~~Di~s~G~~l~el~~~g~~p~~~~~~~----------------~~~~~i~~-~~~~~~~~~~~~~~~~li~~c~~~~p  242 (256)
T cd05114         180 SKSDVWSFGVLMWEVFTEGKMPFEKKSNY----------------EVVEMISR-GFRLYRPKLASMTVYEVMYSCWHEKP  242 (256)
T ss_pred             hhhhhHHHHHHHHHHHcCCCCCCCCCCHH----------------HHHHHHHC-CCCCCCCCCCCHHHHHHHHHHccCCc
Confidence            99999999999999999 88888532111                01111111 11111223345678999999999999


Q ss_pred             CCCCCHHHHHHHH
Q 028134          161 NFRPLINDIVVAL  173 (213)
Q Consensus       161 ~~Rps~~ev~~~L  173 (213)
                      ++||+++++++.|
T Consensus       243 ~~Rps~~~l~~~l  255 (256)
T cd05114         243 EGRPTFAELLRAI  255 (256)
T ss_pred             ccCcCHHHHHHhh
Confidence            9999999999876


No 108
>PTZ00284 protein kinase; Provisional
Probab=99.95  E-value=5.6e-28  Score=201.88  Aligned_cols=167  Identities=19%  Similarity=0.222  Sum_probs=113.3

Q ss_pred             hhHHHHHHHHHHhhc-CCCCCeEecCCCCCceeeCCCC----------------ceEEeeeecccccCCCCCCccccccc
Q 028134            2 KIAVGAARGLEYLHC-KANPPVIYRDLKSANILLDNDF----------------NPKLSDFGLAKLGPVGDNTHVSTRVM   64 (213)
Q Consensus         2 ~i~~ql~~al~~LH~-~~~~~~vH~dl~~~nil~~~~~----------------~~~l~d~~~~~~~~~~~~~~~~~~~~   64 (213)
                      .++.||+.||.|||+ .+   |+||||||+||+++.++                .+||+|||.+...     ........
T Consensus       235 ~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~-----~~~~~~~~  306 (467)
T PTZ00284        235 QIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDE-----RHSRTAIV  306 (467)
T ss_pred             HHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccC-----cccccccc
Confidence            578999999999997 47   99999999999997655                4899999987532     11123456


Q ss_pred             ccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhh-----hhhh--hhhhhhhcc----
Q 028134           65 GTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRP-----FLKD--QKKFVHLVD----  133 (213)
Q Consensus        65 ~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~----  133 (213)
                      ++..|+|||.+.+..++.++|||||||++|||++|+.||...........+.....     +...  ......+++    
T Consensus       307 gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  386 (467)
T PTZ00284        307 STRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQ  386 (467)
T ss_pred             CCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccc
Confidence            78999999999999999999999999999999999999975432211111100000     0000  000000000    


Q ss_pred             --cccCC-----------CCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH--HHHHH
Q 028134          134 --PLLHG-----------RYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV--ALDYL  176 (213)
Q Consensus       134 --~~~~~-----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~--~L~~l  176 (213)
                        +....           .........+.+||..||+.||++|||++|+++  .|...
T Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        387 LRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY  444 (467)
T ss_pred             ccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence              00000           000112456889999999999999999999997  44443


No 109
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.95  E-value=6.6e-28  Score=193.35  Aligned_cols=167  Identities=25%  Similarity=0.300  Sum_probs=113.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC-cccccccccccccCcccccc--C
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT-HVSTRVMGTYGYCAPEYAMS--G   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~--~   78 (213)
                      .++.|+++||.|||+++   ++|+||||+||+++.++.++|+|||++......... .......++..|+|||.+.+  .
T Consensus       107 ~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  183 (338)
T cd07859         107 FFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS  183 (338)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhcccc
Confidence            47899999999999998   999999999999999999999999998753221111 11123467889999998765  5


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchh--------hhhh--hhhhhhhhcccccCCCC---CHHHH
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR--------PFLK--DQKKFVHLVDPLLHGRY---PRRCL  145 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~~~~~~~~~~---~~~~~  145 (213)
                      .++.++|+||+||++|+|++|..||...........+....        ....  ........+.+......   .....
T Consensus       184 ~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (338)
T cd07859         184 KYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNAD  263 (338)
T ss_pred             ccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCC
Confidence            77899999999999999999999996433211110000000        0000  00000000111100000   01234


Q ss_pred             HHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          146 NYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       146 ~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ..+.+++.+||+.+|++||+++|+++
T Consensus       264 ~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         264 PLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             hHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            56789999999999999999999986


No 110
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.95  E-value=1.8e-27  Score=190.16  Aligned_cols=147  Identities=29%  Similarity=0.402  Sum_probs=112.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++......  ........++..|++||.+.+..++
T Consensus       105 ~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~  179 (324)
T cd05589         105 FYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF--GDRTSTFCGTPEFLAPEVLTETSYT  179 (324)
T ss_pred             HHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCCC--CCcccccccCccccCHhHhcCCCCC
Confidence            57899999999999998   999999999999999999999999987642111  1122335678899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+|||||++|+|++|..||......                .....+....  ..++......+.+++.+||+.||.
T Consensus       180 ~~~DiwslG~il~el~~G~~pf~~~~~~----------------~~~~~i~~~~--~~~p~~~~~~~~~li~~~L~~dP~  241 (324)
T cd05589         180 RAVDWWGLGVLIYEMLVGESPFPGDDEE----------------EVFDSIVNDE--VRYPRFLSREAISIMRRLLRRNPE  241 (324)
T ss_pred             cccchhhHHHHHHHHHhCCCCCCCCCHH----------------HHHHHHHhCC--CCCCCCCCHHHHHHHHHHhhcCHh
Confidence            9999999999999999999999633211                0111111111  123344567789999999999999


Q ss_pred             CCC-----CHHHHHH
Q 028134          162 FRP-----LINDIVV  171 (213)
Q Consensus       162 ~Rp-----s~~ev~~  171 (213)
                      +||     ++.++++
T Consensus       242 ~R~~~~~~~~~~l~~  256 (324)
T cd05589         242 RRLGSGEKDAEDVKK  256 (324)
T ss_pred             HcCCCCCCCHHHHhh
Confidence            999     5666665


No 111
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=5.5e-28  Score=200.06  Aligned_cols=149  Identities=27%  Similarity=0.370  Sum_probs=122.3

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeC-CCCceEEeeeecccccCCCCCCcccccccccccccCccccccC--C
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLD-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG--K   79 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~-~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~--~   79 (213)
                      +..||++||.|||.+.   |||||||.+|++++ -.|.+|+.|||-+...  .+.......+.||..|||||++..+  +
T Consensus       680 YtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRL--AginP~TETFTGTLQYMAPEvIDqG~RG  754 (1226)
T KOG4279|consen  680 YTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYMAPEVIDQGPRG  754 (1226)
T ss_pred             HHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhh--ccCCccccccccchhhhChHhhccCCcC
Confidence            4589999999999998   99999999999995 5799999999998763  2344556678899999999998754  6


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      |..++|||||||.+.||.+|++||-...               ..+..+.++=--...+.+|.+...+...+|.+|+.++
T Consensus       755 YG~aADIWS~GCT~vEMATGrPPF~Elg---------------spqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd  819 (1226)
T KOG4279|consen  755 YGKAADIWSFGCTMVEMATGRPPFVELG---------------SPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPD  819 (1226)
T ss_pred             CCchhhhhhccceeEeeccCCCCeeecC---------------ChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCC
Confidence            7899999999999999999999994211               1123333333334466788999999999999999999


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      |.+||++.++++
T Consensus       820 ~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  820 PCDRPSAKDLLQ  831 (1226)
T ss_pred             cccCccHHHhcc
Confidence            999999999986


No 112
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=99.95  E-value=1.4e-27  Score=185.45  Aligned_cols=155  Identities=26%  Similarity=0.397  Sum_probs=117.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCccc-ccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS-TRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.|+.|||+.+   ++|+||||+||+++.++.++++|||++............ .....+..|++||.+.+..+
T Consensus       111 ~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~  187 (268)
T cd05063         111 GMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF  187 (268)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCc
Confidence            57899999999999998   999999999999999999999999998654222111111 11122457999999888888


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.++|+||+|+++|++++ |..||.....                 ......+........+..++..+.+++.+||..+
T Consensus       188 ~~~~Dv~slG~il~ell~~g~~p~~~~~~-----------------~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~  250 (268)
T cd05063         188 TSASDVWSFGIVMWEVMSFGERPYWDMSN-----------------HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQD  250 (268)
T ss_pred             ChHhHHHHHHHHHHHHHhCCCCCCCcCCH-----------------HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999987 9999853211                 1111111111222223456678899999999999


Q ss_pred             CCCCCCHHHHHHHHHHH
Q 028134          160 ANFRPLINDIVVALDYL  176 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l  176 (213)
                      |++||++.+|++.|+++
T Consensus       251 p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         251 RARRPRFVDIVNLLDKL  267 (268)
T ss_pred             cccCcCHHHHHHHHHhh
Confidence            99999999999999876


No 113
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.95  E-value=1e-27  Score=191.85  Aligned_cols=148  Identities=28%  Similarity=0.399  Sum_probs=114.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.||+.||+|||+++   ++|+||||+||+++.++.++|+|||++......  ........++..|+|||.+.+..++
T Consensus        99 ~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~  173 (328)
T cd05593          99 FYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--AATMKTFCGTPEYLAPEVLEDNDYG  173 (328)
T ss_pred             HHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCc--ccccccccCCcCccChhhhcCCCCC
Confidence            47899999999999998   999999999999999999999999998642111  1112234578899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....+...  ...++......+.+++.+||..||.
T Consensus       174 ~~~DiwslGvil~elltG~~Pf~~~~~~----------------~~~~~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~  235 (328)
T cd05593         174 RAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------KLFELILME--DIKFPRTLSADAKSLLSGLLIKDPN  235 (328)
T ss_pred             ccCCccccchHHHHHhhCCCCCCCCCHH----------------HHHHHhccC--CccCCCCCCHHHHHHHHHHcCCCHH
Confidence            9999999999999999999999632111                000111111  1123445567789999999999999


Q ss_pred             CCC-----CHHHHHHH
Q 028134          162 FRP-----LINDIVVA  172 (213)
Q Consensus       162 ~Rp-----s~~ev~~~  172 (213)
                      +|+     ++.++++.
T Consensus       236 ~R~~~~~~~~~~il~h  251 (328)
T cd05593         236 KRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HcCCCCCCCHHHHhcC
Confidence            997     89998863


No 114
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.95  E-value=2.8e-27  Score=188.91  Aligned_cols=147  Identities=27%  Similarity=0.338  Sum_probs=113.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++.......  .......++..|+|||.+.+..++
T Consensus       104 ~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~  178 (323)
T cd05584         104 FYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG--TVTHTFCGTIEYMAPEILMRSGHG  178 (323)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--CcccccCCCccccChhhccCCCCC
Confidence            36789999999999998   9999999999999999999999999976422111  112234578899999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....+....  ...+......+.+++..||+.+|+
T Consensus       179 ~~~DiwslG~il~ell~G~~pf~~~~~~----------------~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~  240 (323)
T cd05584         179 KAVDWWSLGALMYDMLTGAPPFTAENRK----------------KTIDKILKGK--LNLPPYLTPEARDLLKKLLKRNPS  240 (323)
T ss_pred             CcceecccHHHHHHHhcCCCCCCCCCHH----------------HHHHHHHcCC--CCCCCCCCHHHHHHHHHHcccCHh
Confidence            9999999999999999999999632211                1111122211  123444567789999999999999


Q ss_pred             CCC-----CHHHHHH
Q 028134          162 FRP-----LINDIVV  171 (213)
Q Consensus       162 ~Rp-----s~~ev~~  171 (213)
                      +||     ++.++++
T Consensus       241 ~R~~~~~~~~~~l~~  255 (323)
T cd05584         241 SRLGAGPGDAAEVQS  255 (323)
T ss_pred             HcCCCCCCCHHHHhc
Confidence            999     7888876


No 115
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.95  E-value=2.6e-27  Score=184.31  Aligned_cols=158  Identities=21%  Similarity=0.303  Sum_probs=119.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++........ ...........|++||.+....++
T Consensus       111 ~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~  186 (270)
T cd05056         111 LYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY-YKASKGKLPIKWMAPESINFRRFT  186 (270)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecccccc-eecCCCCccccccChhhhccCCCC
Confidence            46789999999999998   99999999999999999999999999875422211 111112234579999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||........                .. .+........+..++..+.+++.+||..+|
T Consensus       187 ~~~Di~slG~il~el~~~g~~pf~~~~~~~~----------------~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  249 (270)
T cd05056         187 SASDVWMFGVCMWEILMLGVKPFQGVKNNDV----------------IG-RIENGERLPMPPNCPPTLYSLMTKCWAYDP  249 (270)
T ss_pred             chhhhHHHHHHHHHHHHcCCCCCCCCCHHHH----------------HH-HHHcCCcCCCCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999886 9999863321110                00 011111112344566789999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhcc
Q 028134          161 NFRPLINDIVVALDYLVSQR  180 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~~  180 (213)
                      ++||++.++++.|+.+...+
T Consensus       250 ~~Rpt~~~~~~~l~~~~~~~  269 (270)
T cd05056         250 SKRPRFTELKAQLSDILQEE  269 (270)
T ss_pred             hhCcCHHHHHHHHHHHHhcc
Confidence            99999999999999987653


No 116
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.95  E-value=1.1e-27  Score=185.12  Aligned_cols=151  Identities=25%  Similarity=0.367  Sum_probs=114.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.|++|||+.+   ++|+||+|+||+++.++.++++|||++......... .......+..|++||...+..++
T Consensus       104 ~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~  179 (256)
T cd05059         104 DMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-SSQGTKFPVKWAPPEVFDYSRFS  179 (256)
T ss_pred             HHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccccccc-ccCCCCCCccccCHHHhccCCCC
Confidence            57899999999999998   999999999999999999999999988754221111 11112234579999999888899


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||......                 .....+........+..++..+.+++.+||..+|
T Consensus       180 ~~~Di~slG~il~~l~~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  242 (256)
T cd05059         180 SKSDVWSFGVLMWEVFSEGKMPYERFSNS-----------------EVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKP  242 (256)
T ss_pred             chhhHHHHHHHHHHHhccCCCCCCCCCHH-----------------HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCCh
Confidence            99999999999999998 78888632111                 0111111112222334567789999999999999


Q ss_pred             CCCCCHHHHHHHH
Q 028134          161 NFRPLINDIVVAL  173 (213)
Q Consensus       161 ~~Rps~~ev~~~L  173 (213)
                      ++||++.++++.|
T Consensus       243 ~~Rpt~~~~l~~l  255 (256)
T cd05059         243 EDRPAFKKLLSQL  255 (256)
T ss_pred             hhCcCHHHHHHHh
Confidence            9999999999876


No 117
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.95  E-value=1.9e-27  Score=184.03  Aligned_cols=153  Identities=27%  Similarity=0.436  Sum_probs=116.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+.+   ++|+||+|+||+++.++.++++|||++........ .......++..|++||......++
T Consensus       106 ~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~  181 (260)
T cd05067         106 DMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFT  181 (260)
T ss_pred             HHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc-ccccCCcccccccCHHHhccCCcC
Confidence            57889999999999998   99999999999999999999999999875432111 111223346689999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||......                 .....+........+...+.++.+++.+||..+|
T Consensus       182 ~~~Di~slG~~l~el~~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  244 (260)
T cd05067         182 IKSDVWSFGILLTEIVTYGRIPYPGMTNP-----------------EVIQNLERGYRMPRPDNCPEELYELMRLCWKEKP  244 (260)
T ss_pred             cccchHHHHHHHHHHHhCCCCCCCCCChH-----------------HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999998 99998632211                 1111111111222234456689999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDY  175 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~  175 (213)
                      ++||+++++...|+.
T Consensus       245 ~~Rp~~~~l~~~l~~  259 (260)
T cd05067         245 EERPTFEYLRSVLED  259 (260)
T ss_pred             hhCCCHHHHHHHhhc
Confidence            999999999999875


No 118
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.94  E-value=1.6e-27  Score=190.92  Aligned_cols=152  Identities=26%  Similarity=0.310  Sum_probs=113.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      .++.||+.||.|||+++   ++||||||+||+++.++.++|+|||++........ .......++..|+|||.+.+. .+
T Consensus       109 ~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~  184 (332)
T cd05614         109 FYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK-ERTYSFCGTIEYMAPEIIRGKGGH  184 (332)
T ss_pred             HHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCccccccCC-CccccccCCccccCHHHhcCCCCC
Confidence            46789999999999998   99999999999999999999999999875322211 112234688999999998764 46


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+|||||++|+|++|..||............            ...+..  ....++......+.+++.+||+.||
T Consensus       185 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~------------~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp  250 (332)
T cd05614         185 GKAVDWWSLGILIFELLTGASPFTLEGERNTQSEV------------SRRILK--CDPPFPSFIGPEAQDLLHKLLRKDP  250 (332)
T ss_pred             CCccccccchhhhhhhhcCCCCCCCCCCCCCHHHH------------HHHHhc--CCCCCCCCCCHHHHHHHHHHcCCCH
Confidence            88999999999999999999999643322111000            001111  1122344556778999999999999


Q ss_pred             CCCC-----CHHHHHH
Q 028134          161 NFRP-----LINDIVV  171 (213)
Q Consensus       161 ~~Rp-----s~~ev~~  171 (213)
                      ++||     +++++++
T Consensus       251 ~~R~~~~~~~~~~~l~  266 (332)
T cd05614         251 KKRLGAGPQGASEIKE  266 (332)
T ss_pred             HHcCCCCCCCHHHHHc
Confidence            9999     6777765


No 119
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.94  E-value=5.3e-27  Score=181.94  Aligned_cols=156  Identities=24%  Similarity=0.326  Sum_probs=118.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+.+   ++|+||+|+||+++.++.++++|||++.......  .......++..|.+||.+.+..++
T Consensus       110 ~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~  184 (267)
T cd08224         110 KYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYN  184 (267)
T ss_pred             HHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccCCC--cccceecCCccccCHHHhccCCCC
Confidence            57899999999999998   9999999999999999999999999876532211  112234567789999998888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCH-HHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPR-RCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|+++|++++|..||......    ..           ...+.+........+. .....+.+++..||..+|
T Consensus       185 ~~~Di~slG~il~~l~~g~~p~~~~~~~----~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p  249 (267)
T cd08224         185 FKSDIWSLGCLLYEMAALQSPFYGDKMN----LY-----------SLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDP  249 (267)
T ss_pred             chhcHHHHHHHHHHHHHCCCCcccCCcc----HH-----------HHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCc
Confidence            9999999999999999999998533211    00           0011111111122222 556688999999999999


Q ss_pred             CCCCCHHHHHHHHHHHh
Q 028134          161 NFRPLINDIVVALDYLV  177 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~  177 (213)
                      ++||++.+|++.|+.+.
T Consensus       250 ~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         250 EKRPDISYVLQVAKEMH  266 (267)
T ss_pred             ccCCCHHHHHHHHHHhc
Confidence            99999999999998764


No 120
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.94  E-value=7e-27  Score=186.13  Aligned_cols=147  Identities=31%  Similarity=0.450  Sum_probs=113.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.......  .......++..|++||.+.+..++
T Consensus       100 ~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~  174 (316)
T cd05592         100 FYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKASTFCGTPDYIAPEILKGQKYN  174 (316)
T ss_pred             HHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--CccccccCCccccCHHHHcCCCCC
Confidence            47899999999999998   9999999999999999999999999986432211  122334678999999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....+..  ....++..+...+.+++..||+.+|.
T Consensus       175 ~~~DvwslG~il~ell~G~~Pf~~~~~~----------------~~~~~i~~--~~~~~~~~~~~~~~~ll~~~l~~~P~  236 (316)
T cd05592         175 ESVDWWSFGVLLYEMLIGQSPFHGEDED----------------ELFDSILN--DRPHFPRWISKEAKDCLSKLFERDPT  236 (316)
T ss_pred             CcccchhHHHHHHHHHhCCCCCCCCCHH----------------HHHHHHHc--CCCCCCCCCCHHHHHHHHHHccCCHH
Confidence            9999999999999999999999632211                00111111  11223445567789999999999999


Q ss_pred             CCCCHH-HHHH
Q 028134          162 FRPLIN-DIVV  171 (213)
Q Consensus       162 ~Rps~~-ev~~  171 (213)
                      +||++. ++++
T Consensus       237 ~R~~~~~~l~~  247 (316)
T cd05592         237 KRLGVDGDIRQ  247 (316)
T ss_pred             HcCCChHHHHc
Confidence            999975 4543


No 121
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=99.94  E-value=1.8e-27  Score=183.71  Aligned_cols=150  Identities=30%  Similarity=0.439  Sum_probs=116.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|+.|||+++   ++|+||+|+||+++.++.++|+|||.+........     ....+..|.+||.+....++
T Consensus       106 ~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~  177 (256)
T cd05039         106 GFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-----SGKLPVKWTAPEALREKKFS  177 (256)
T ss_pred             HHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccccc-----cCCCcccccCchhhcCCcCC
Confidence            57899999999999998   99999999999999999999999999875422111     12335579999998888888


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|++++++++ |..||.....                 ..+...+........+..++..+.+++.+||..+|
T Consensus       178 ~~~Di~slG~il~~l~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  240 (256)
T cd05039         178 TKSDVWSFGILLWEIYSFGRVPYPRIPL-----------------KDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDP  240 (256)
T ss_pred             cHHHHHHHHHHHHHHHhcCCCCCCCCCH-----------------HHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccCh
Confidence            99999999999999997 8888852210                 11111111122222344556789999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++||++.++++.|+.+
T Consensus       241 ~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         241 AKRPTFKQLREQLALI  256 (256)
T ss_pred             hhCcCHHHHHHHHhcC
Confidence            9999999999998753


No 122
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=99.94  E-value=1.7e-27  Score=184.11  Aligned_cols=152  Identities=24%  Similarity=0.390  Sum_probs=114.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||+|||+++   ++|+||+|.||+++.++.++++|||.+........ .......++..|++||...+..++
T Consensus       104 ~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~  179 (256)
T cd05113         104 EMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLLYSKFS  179 (256)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCce-eecCCCccChhhCCHHHHhcCccc
Confidence            57899999999999998   99999999999999999999999998875432211 111122345679999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|+|++ |..||......                .....+.+ ......+......+.+++.+||+.+|
T Consensus       180 ~~~Di~slG~~l~~l~~~g~~p~~~~~~~----------------~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p  242 (256)
T cd05113         180 SKSDVWAFGVLMWEVYSLGKMPYERFNNS----------------ETVEKVSQ-GLRLYRPHLASEKVYAIMYSCWHEKA  242 (256)
T ss_pred             chhHHHHHHHHHHHHhcCCCCCcCcCCHH----------------HHHHHHhc-CCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            99999999999999998 88888522211                01111111 11111223345788999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 028134          161 NFRPLINDIVVALD  174 (213)
Q Consensus       161 ~~Rps~~ev~~~L~  174 (213)
                      .+||++.+|+..|+
T Consensus       243 ~~Rp~~~~ll~~~~  256 (256)
T cd05113         243 EERPTFQQLLSSIE  256 (256)
T ss_pred             ccCCCHHHHHHhhC
Confidence            99999999998763


No 123
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.94  E-value=1.8e-27  Score=186.70  Aligned_cols=162  Identities=21%  Similarity=0.253  Sum_probs=113.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++.......   ......++..|+|||.+.+..++
T Consensus       112 ~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~  185 (288)
T cd07863         112 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYA  185 (288)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCccccccCcc---cCCCccccccccCchHhhCCCCC
Confidence            47899999999999998   9999999999999999999999999987542211   11234567889999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccc-hhhchhhhhhhhhhhh-------hhcccccC---CCCCHHHHHHHHH
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQN-LVSWSRPFLKDQKKFV-------HLVDPLLH---GRYPRRCLNYAVA  150 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~~---~~~~~~~~~~~~~  150 (213)
                      .++|+||+||++|+|++|..||.......... ......  ........       ....+...   ..........+.+
T Consensus       186 ~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (288)
T cd07863         186 TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG--LPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQ  263 (288)
T ss_pred             CcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhC--CCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHH
Confidence            99999999999999999999986432211100 000000  00000000       00000000   0011234567889


Q ss_pred             HHHhhcCcCCCCCCCHHHHHH
Q 028134          151 VTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       151 li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ++.+||+.||++|||+.+++.
T Consensus       264 li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         264 LLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             HHHHHhccCcccCCCHHHHhc
Confidence            999999999999999999874


No 124
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.94  E-value=8.6e-28  Score=179.84  Aligned_cols=147  Identities=27%  Similarity=0.365  Sum_probs=115.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC---
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG---   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~---   78 (213)
                      ++++|+.+|++|||.++   ||||||||+||+++++..++|.|||+++....+.   ......||+.|+|||.+...   
T Consensus       127 ~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGFa~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e  200 (411)
T KOG0599|consen  127 RIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGFACQLEPGE---KLRELCGTPGYLAPETIKCSMYE  200 (411)
T ss_pred             HHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEeccceeeccCCch---hHHHhcCCCcccChhheeeeccc
Confidence            58999999999999998   9999999999999999999999999998653332   23457899999999988743   


Q ss_pred             ---CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcc-cccCCC--CCHHHHHHHHHHH
Q 028134           79 ---KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVD-PLLHGR--YPRRCLNYAVAVT  152 (213)
Q Consensus        79 ---~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~li  152 (213)
                         +|+...|+|++|+++|.++.|.+||.-..                 +-.+..++. ......  .=.+......++|
T Consensus       201 ~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk-----------------QmlMLR~ImeGkyqF~speWadis~~~KdLI  263 (411)
T KOG0599|consen  201 NHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK-----------------QMLMLRMIMEGKYQFRSPEWADISATVKDLI  263 (411)
T ss_pred             CCCCccchhhHHHHHHHHHHHHcCCCchhHHH-----------------HHHHHHHHHhcccccCCcchhhccccHHHHH
Confidence               57888999999999999999999996111                 111111111 111111  1135567889999


Q ss_pred             HhhcCcCCCCCCCHHHHHH
Q 028134          153 AMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       153 ~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+||+.||.+|-|++|+++
T Consensus       264 srlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  264 SRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             HHHHeeCchhcccHHHHhc
Confidence            9999999999999999987


No 125
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94  E-value=1.1e-27  Score=197.60  Aligned_cols=158  Identities=31%  Similarity=0.436  Sum_probs=125.2

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL   82 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~   82 (213)
                      ++..|+.||.|||+++   |+|||||.+|||++..|.+||+|||+++..  .........+.||+.|+|||++.+..|+.
T Consensus       473 yaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~--m~~g~~TsTfCGTpey~aPEil~e~~Yt~  547 (694)
T KOG0694|consen  473 YAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEG--MGQGDRTSTFCGTPEFLAPEVLTEQSYTR  547 (694)
T ss_pred             HHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccccc--CCCCCccccccCChhhcChhhhccCcccc
Confidence            5678999999999999   999999999999999999999999998752  22334567789999999999999999999


Q ss_pred             ccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCCC
Q 028134           83 KSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANF  162 (213)
Q Consensus        83 ~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  162 (213)
                      +.|.|+|||++|||+.|..||.+..+.+.                ...++..  ...+|.-+..+...+++++|..+|++
T Consensus       548 aVDWW~lGVLlyeML~Gq~PF~gddEee~----------------FdsI~~d--~~~yP~~ls~ea~~il~~ll~k~p~k  609 (694)
T KOG0694|consen  548 AVDWWGLGVLLYEMLVGESPFPGDDEEEV----------------FDSIVND--EVRYPRFLSKEAIAIMRRLLRKNPEK  609 (694)
T ss_pred             hhhHHHHHHHHHHHHcCCCCCCCCCHHHH----------------HHHHhcC--CCCCCCcccHHHHHHHHHHhccCccc
Confidence            99999999999999999999974432221                1112211  22457778889999999999999999


Q ss_pred             CCCH-----HHHHH-------HHHHHhhccCCC
Q 028134          163 RPLI-----NDIVV-------ALDYLVSQRDSH  183 (213)
Q Consensus       163 Rps~-----~ev~~-------~L~~l~~~~~~~  183 (213)
                      |-.+     .+|.+       -.++|..+.-.+
T Consensus       610 RLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~P  642 (694)
T KOG0694|consen  610 RLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKP  642 (694)
T ss_pred             ccCCCCCCchhhhhCCccccCCHHHHhhccCCC
Confidence            9776     34443       135566555544


No 126
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.94  E-value=7.1e-28  Score=189.37  Aligned_cols=165  Identities=24%  Similarity=0.316  Sum_probs=112.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.......  .......++..|+|||.+.+ ..+
T Consensus       107 ~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  181 (288)
T cd07871         107 IFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSTEY  181 (288)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC--ccccCceecccccChHHhcCCccc
Confidence            46789999999999998   9999999999999999999999999986532211  11223456889999998865 467


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchh--------hhhhhhhhhhhhcccccCCC----CCHHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR--------PFLKDQKKFVHLVDPLLHGR----YPRRCLNYA  148 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  148 (213)
                      +.++|+||+||++|+|++|..||................        +.............+.....    .......++
T Consensus       182 ~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (288)
T cd07871         182 STPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDG  261 (288)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHH
Confidence            899999999999999999999996433221110000000        00000011111111111000    011345678


Q ss_pred             HHHHHhhcCcCCCCCCCHHHHHH
Q 028134          149 VAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       149 ~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+++.+||+.||.+|||++|+++
T Consensus       262 ~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         262 IDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             HHHHHHhcCcCcccCCCHHHHhc
Confidence            89999999999999999999974


No 127
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.94  E-value=6e-27  Score=187.48  Aligned_cols=144  Identities=29%  Similarity=0.366  Sum_probs=112.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++......     .....++..|+|||.+.+..++
T Consensus       122 ~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~  193 (329)
T PTZ00263        122 FYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-----TFTLCGTPEYLAPEVIQSKGHG  193 (329)
T ss_pred             HHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC-----cceecCChhhcCHHHHcCCCCC
Confidence            36789999999999998   999999999999999999999999998754221     1234578899999999988889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+|||||++|+|++|..||......                .....+....  ..++......+.+++..||+.||.
T Consensus       194 ~~~DiwslG~il~elltg~~pf~~~~~~----------------~~~~~i~~~~--~~~p~~~~~~~~~li~~~L~~dP~  255 (329)
T PTZ00263        194 KAVDWWTMGVLLYEFIAGYPPFFDDTPF----------------RIYEKILAGR--LKFPNWFDGRARDLVKGLLQTDHT  255 (329)
T ss_pred             CcceeechHHHHHHHHcCCCCCCCCCHH----------------HHHHHHhcCC--cCCCCCCCHHHHHHHHHHhhcCHH
Confidence            9999999999999999999999532110                0111111111  122334556789999999999999


Q ss_pred             CCCC-----HHHHHH
Q 028134          162 FRPL-----INDIVV  171 (213)
Q Consensus       162 ~Rps-----~~ev~~  171 (213)
                      +||+     +++++.
T Consensus       256 ~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        256 KRLGTLKGGVADVKN  270 (329)
T ss_pred             HcCCCCCCCHHHHhc
Confidence            9987     677774


No 128
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.94  E-value=3e-27  Score=182.54  Aligned_cols=154  Identities=28%  Similarity=0.423  Sum_probs=116.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC-cccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT-HVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.||.|||+++   ++|+||+|+||+++.++.++|+|||++......... .......++..|++||.+.+..+
T Consensus       101 ~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~  177 (257)
T cd05040         101 DYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTF  177 (257)
T ss_pred             HHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCc
Confidence            47789999999999998   999999999999999999999999998765332211 11122345678999999888888


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.++|+||+|+++|+|++ |..||.......                ....+.........+...+..+.+++.+||+.+
T Consensus       178 ~~~~Di~slG~~l~el~t~g~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  241 (257)
T cd05040         178 SHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ----------------ILKKIDKEGERLERPEACPQDIYNVMLQCWAHN  241 (257)
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCCCCCCHHH----------------HHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCC
Confidence            999999999999999998 999985221110                000011011111223345678999999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 028134          160 ANFRPLINDIVVALD  174 (213)
Q Consensus       160 p~~Rps~~ev~~~L~  174 (213)
                      |++||++.++++.|.
T Consensus       242 p~~Rps~~~~~~~l~  256 (257)
T cd05040         242 PADRPTFAALREFLP  256 (257)
T ss_pred             cccCCCHHHHHHHhc
Confidence            999999999998875


No 129
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.94  E-value=2.6e-27  Score=182.71  Aligned_cols=149  Identities=30%  Similarity=0.471  Sum_probs=114.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.|+.|||+.+   ++|+||+|+||+++.++.++|+|||++......     ......+..|++||.+.+..++
T Consensus       104 ~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~  175 (254)
T cd05083         104 QFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMG-----VDNSKLPVKWTAPEALKHKKFS  175 (254)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecccc-----CCCCCCCceecCHHHhccCCcC
Confidence            57889999999999998   999999999999999999999999998653221     1112335679999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .+.|+||+|+++|++++ |..||......                 .....+........+..++..+.+++.+||+.+|
T Consensus       176 ~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  238 (254)
T cd05083         176 SKSDVWSYGVLLWEVFSYGRAPYPKMSLK-----------------EVKECVEKGYRMEPPEGCPADVYVLMTSCWETEP  238 (254)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCccCCHH-----------------HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCCh
Confidence            99999999999999997 88888532211                 1111111222222334556788999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDY  175 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~  175 (213)
                      ++||+++++++.|+.
T Consensus       239 ~~Rp~~~~l~~~l~~  253 (254)
T cd05083         239 KKRPSFHKLREKLEK  253 (254)
T ss_pred             hhCcCHHHHHHHHcc
Confidence            999999999998763


No 130
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.94  E-value=2.5e-27  Score=184.32  Aligned_cols=157  Identities=23%  Similarity=0.264  Sum_probs=110.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC---
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG---   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~---   78 (213)
                      +++.|++.|++|||+++   ++|+||||+||+++.++.++|+|||.+................++..|++||.+.+.   
T Consensus       104 ~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  180 (269)
T cd05087         104 RMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGN  180 (269)
T ss_pred             HHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhcccccc
Confidence            46789999999999998   999999999999999999999999998643222211112233456789999987532   


Q ss_pred             ----CCCCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHH
Q 028134           79 ----KLTLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTA  153 (213)
Q Consensus        79 ----~~~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  153 (213)
                          .++.++|+||||+++|++++ |..||.........   .         ............+.........+.+++.
T Consensus       181 ~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~  248 (269)
T cd05087         181 LLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL---T---------YTVREQQLKLPKPRLKLPLSDRWYEVMQ  248 (269)
T ss_pred             ccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH---H---------HHhhcccCCCCCCccCCCCChHHHHHHH
Confidence                35789999999999999996 99999633211100   0         0000000111111222234556888999


Q ss_pred             hhcCcCCCCCCCHHHHHHHHH
Q 028134          154 MCLNEEANFRPLINDIVVALD  174 (213)
Q Consensus       154 ~cl~~~p~~Rps~~ev~~~L~  174 (213)
                      .|| .+|++||+++||++.|+
T Consensus       249 ~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         249 FCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             HHh-cCcccCCCHHHHHHHhc
Confidence            999 68999999999998875


No 131
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.94  E-value=1.9e-27  Score=189.32  Aligned_cols=146  Identities=29%  Similarity=0.452  Sum_probs=111.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++||||||+||+++.++.++|+|||++......  ........++..|+|||.+.+..++
T Consensus       100 ~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~  174 (316)
T cd05620         100 FYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--DNRASTFCGTPDYIAPEILQGLKYT  174 (316)
T ss_pred             HHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccC--CCceeccCCCcCccCHHHHcCCCCC
Confidence            46789999999999998   999999999999999999999999987642111  1122335678999999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                 .+.+.+.. ....++......+.+++..||+.||+
T Consensus       175 ~~~DiwslGvil~el~~g~~Pf~~~~~~-----------------~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dP~  236 (316)
T cd05620         175 FSVDWWSFGVLLYEMLIGQSPFHGDDED-----------------ELFESIRV-DTPHYPRWITKESKDILEKLFERDPT  236 (316)
T ss_pred             cccchhhhHHHHHHHHhCCCCCCCCCHH-----------------HHHHHHHh-CCCCCCCCCCHHHHHHHHHHccCCHH
Confidence            9999999999999999999999632211                 00011100 01122334566789999999999999


Q ss_pred             CCCCHH-HHH
Q 028134          162 FRPLIN-DIV  170 (213)
Q Consensus       162 ~Rps~~-ev~  170 (213)
                      +||++. +++
T Consensus       237 ~R~~~~~~~~  246 (316)
T cd05620         237 RRLGVVGNIR  246 (316)
T ss_pred             HcCCChHHHH
Confidence            999985 554


No 132
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.94  E-value=4.2e-27  Score=182.22  Aligned_cols=152  Identities=25%  Similarity=0.315  Sum_probs=115.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcc-cccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........... .....++..|++||.+.+..+
T Consensus       108 ~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  184 (263)
T cd06625         108 KYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGY  184 (263)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCC
Confidence            57899999999999998   99999999999999999999999999865322111111 122346678999999998888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||+|+++|++++|..||......                ...............+..+...+.+++..||..+|
T Consensus       185 ~~~~Di~slG~il~el~~g~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  248 (263)
T cd06625         185 GRKADVWSVGCTVVEMLTEKPPWAEFEAM----------------AAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENA  248 (263)
T ss_pred             CchhhhHHHHHHHHHHHhCCCCccccchH----------------HHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCc
Confidence            99999999999999999999998532111                11111122222233455667789999999999999


Q ss_pred             CCCCCHHHHHHH
Q 028134          161 NFRPLINDIVVA  172 (213)
Q Consensus       161 ~~Rps~~ev~~~  172 (213)
                      .+||++.++++.
T Consensus       249 ~~Rpt~~~ll~~  260 (263)
T cd06625         249 KKRPSAEELLRH  260 (263)
T ss_pred             ccCCCHHHHhhC
Confidence            999999999863


No 133
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.94  E-value=4.9e-28  Score=200.65  Aligned_cols=169  Identities=24%  Similarity=0.294  Sum_probs=116.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC-ceEEeeeecccccCCCCCCcccccccccccccCccccccC-C
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF-NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-K   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~   79 (213)
                      .++.||+.||+|||+++   |+||||||+||+++.++ .+||+|||++.......   ......++..|+|||.+.+. .
T Consensus       174 ~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~  247 (440)
T PTZ00036        174 LYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ---RSVSYICSRFYRAPELMLGATN  247 (440)
T ss_pred             HHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccccchhccCCC---CcccCCCCcCccCHHHhcCCCC
Confidence            46789999999999998   99999999999998664 69999999997543221   12234568899999987754 6


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhh-hhhhhh------------hcccccCCCCCHHHHH
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKD-QKKFVH------------LVDPLLHGRYPRRCLN  146 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------~~~~~~~~~~~~~~~~  146 (213)
                      ++.++|+||+||++|+|++|..||.........  .......... ......            +....+...++...+.
T Consensus       248 ~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~--~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~  325 (440)
T PTZ00036        248 YTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQL--VRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPD  325 (440)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCH
Confidence            889999999999999999999999644322111  0000000000 000000            0000011112334556


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHH--HHHHHhh
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVV--ALDYLVS  178 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~--~L~~l~~  178 (213)
                      ++.+++.+||..+|.+|||+.|+++  .++.+..
T Consensus       326 ~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~  359 (440)
T PTZ00036        326 DAINFISQFLKYEPLKRLNPIEALADPFFDDLRD  359 (440)
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence            8999999999999999999999985  5555544


No 134
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.94  E-value=1.4e-27  Score=190.70  Aligned_cols=147  Identities=29%  Similarity=0.406  Sum_probs=113.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.||+.||.|||+++   ++|+||||+||+++.++.++|+|||++......  ........++..|+|||.+.+..++
T Consensus        99 ~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~  173 (323)
T cd05595          99 FYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEYLAPEVLEDNDYG  173 (323)
T ss_pred             HHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCC--CCccccccCCcCcCCcccccCCCCC
Confidence            47899999999999998   999999999999999999999999987642111  1112234578899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+|||||++|+|++|..||......                .....+....  ..++......+.+++..||..||.
T Consensus       174 ~~~DiwSlGvil~ell~g~~Pf~~~~~~----------------~~~~~~~~~~--~~~p~~~~~~~~~li~~~L~~dP~  235 (323)
T cd05595         174 RAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------RLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPK  235 (323)
T ss_pred             chhchhhhHHHHHHHHhCCCCCCCCCHH----------------HHHHHHhcCC--CCCCCCCCHHHHHHHHHHccCCHH
Confidence            9999999999999999999998632211                0111111111  123445667889999999999999


Q ss_pred             CCC-----CHHHHHH
Q 028134          162 FRP-----LINDIVV  171 (213)
Q Consensus       162 ~Rp-----s~~ev~~  171 (213)
                      +||     ++.++++
T Consensus       236 ~R~~~~~~~~~~~l~  250 (323)
T cd05595         236 QRLGGGPSDAKEVME  250 (323)
T ss_pred             HhCCCCCCCHHHHHc
Confidence            998     8888875


No 135
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.94  E-value=1.3e-27  Score=182.88  Aligned_cols=165  Identities=21%  Similarity=0.192  Sum_probs=120.2

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KLT   81 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~   81 (213)
                      ++.|+++|++|||...   |+|||||++|+|++..|.+|++|||+++.+....  .......-|.+|+|||.+.+. .|+
T Consensus       182 L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~--k~~T~lVVTLWYRaPELLLG~~tys  256 (419)
T KOG0663|consen  182 LMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL--KPYTPLVVTLWYRAPELLLGAKTYS  256 (419)
T ss_pred             HHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCCc--ccCcceEEEeeecCHHHhcCCcccC
Confidence            6789999999999998   9999999999999999999999999999764432  223345678999999999875 589


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh----hhhhhhhhc---------ccccCCCCCHH-HHHH
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK----DQKKFVHLV---------DPLLHGRYPRR-CLNY  147 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---------~~~~~~~~~~~-~~~~  147 (213)
                      .+.|+||+|||+.|++.+.+.|.+..+.++...+-.......    ..-.....+         -..++..++.. ....
T Consensus       257 t~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~  336 (419)
T KOG0663|consen  257 TAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQ  336 (419)
T ss_pred             cchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchh
Confidence            999999999999999999999987666554332211110000    000000011         01111122211 3467


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                      -++++...|..||.+|-|+.+.++.
T Consensus       337 g~~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  337 GFDLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             HHHHHHHHhccCccccccHHHhhcc
Confidence            8899999999999999999999863


No 136
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.94  E-value=6e-27  Score=186.37  Aligned_cols=103  Identities=30%  Similarity=0.424  Sum_probs=83.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceee----CCCCceEEeeeecccccCCCCCC-cccccccccccccCccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILL----DNDFNPKLSDFGLAKLGPVGDNT-HVSTRVMGTYGYCAPEYAM   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~----~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~   76 (213)
                      .++.|++.||.|||+++   ++|+||||+||++    +.++.+||+|||++......... .......++..|+|||.+.
T Consensus       112 ~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  188 (317)
T cd07868         112 SLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL  188 (317)
T ss_pred             HHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHc
Confidence            47899999999999998   9999999999999    45678999999998764322111 1122346788999999887


Q ss_pred             cC-CCCCccceeeHHHHHHHHHhCCCCccccC
Q 028134           77 SG-KLTLKSDIYSFGVVLLELITGRKAMDLSK  107 (213)
Q Consensus        77 ~~-~~~~~~Di~slG~~~~~l~~g~~p~~~~~  107 (213)
                      +. .++.++|+||+||++|+|++|..||....
T Consensus       189 ~~~~~~~~~DiwslG~il~el~~g~~~f~~~~  220 (317)
T cd07868         189 GARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             CCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence            64 57899999999999999999999996443


No 137
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.94  E-value=1.8e-27  Score=195.15  Aligned_cols=143  Identities=24%  Similarity=0.315  Sum_probs=117.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceee-CCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILL-DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~-~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      .|+.+|+.|+.|||.+|   +|||||||+|||+ +..+.++|+|||.+......     .....-|..|.|||++....+
T Consensus       419 ~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~y  490 (612)
T KOG0603|consen  419 QWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEY  490 (612)
T ss_pred             HHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh-----hcccchhhcccChhhhccCCC
Confidence            48999999999999999   9999999999999 58899999999998753222     112244778999999999999


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||||+++|+|++|+.||..+-..                   .++......+++.........+++.+||+.||
T Consensus       491 t~acD~WSLGvlLy~ML~G~tp~~~~P~~-------------------~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP  551 (612)
T KOG0603|consen  491 TEACDWWSLGVLLYEMLTGRTLFAAHPAG-------------------IEIHTRIQMPKFSECVSDEAKDLLQQLLQVDP  551 (612)
T ss_pred             CcchhhHHHHHHHHHHHhCCCccccCCch-------------------HHHHHhhcCCccccccCHHHHHHHHHhccCCh
Confidence            99999999999999999999999632221                   22233333444456778899999999999999


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      .+||++.++..
T Consensus       552 ~~Rl~~~~i~~  562 (612)
T KOG0603|consen  552 ALRLGADEIGA  562 (612)
T ss_pred             hhCcChhhhcc
Confidence            99999999974


No 138
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.94  E-value=4e-27  Score=183.11  Aligned_cols=155  Identities=26%  Similarity=0.407  Sum_probs=115.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCccccccc---ccccccCccccccC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAMSG   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~Pe~~~~~   78 (213)
                      .++.|++.||+|||+++   ++|+||+|+||+++.++.++++|||++................   .+..|++||.+.+.
T Consensus       110 ~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  186 (269)
T cd05065         110 GMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYR  186 (269)
T ss_pred             HHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccC
Confidence            57889999999999998   9999999999999999999999999886543222111111111   13479999999888


Q ss_pred             CCCCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcC
Q 028134           79 KLTLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLN  157 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  157 (213)
                      .++.++|+||+|+++||+++ |..||.......                 ....+........+..++..+.+++..||.
T Consensus       187 ~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-----------------~~~~i~~~~~~~~~~~~~~~~~~li~~~l~  249 (269)
T cd05065         187 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-----------------VINAIEQDYRLPPPMDCPTALHQLMLDCWQ  249 (269)
T ss_pred             cccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-----------------HHHHHHcCCcCCCcccCCHHHHHHHHHHcC
Confidence            88999999999999999886 888886322110                 000111111112234556778999999999


Q ss_pred             cCCCCCCCHHHHHHHHHHH
Q 028134          158 EEANFRPLINDIVVALDYL  176 (213)
Q Consensus       158 ~~p~~Rps~~ev~~~L~~l  176 (213)
                      .+|++||++.+|+..|+++
T Consensus       250 ~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         250 KDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             CChhhCcCHHHHHHHHHhh
Confidence            9999999999999998875


No 139
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=5.3e-27  Score=189.77  Aligned_cols=96  Identities=31%  Similarity=0.455  Sum_probs=81.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.||+.||.|||+++   ++||||||+||+++.++.++|+|||++......   .......++..|++||.+.+..++
T Consensus       161 ~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~  234 (357)
T PHA03209        161 IIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA---PAFLGLAGTVETNAPEVLARDKYN  234 (357)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC---cccccccccccccCCeecCCCCCC
Confidence            57899999999999998   999999999999999999999999998642111   112234578899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCc
Q 028134           82 LKSDIYSFGVVLLELITGRKAM  103 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~  103 (213)
                      .++|+|||||++|||+++..++
T Consensus       235 ~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        235 SKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             chhhHHHHHHHHHHHHHcCCcc
Confidence            9999999999999999865544


No 140
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.94  E-value=4.3e-27  Score=181.36  Aligned_cols=148  Identities=27%  Similarity=0.402  Sum_probs=114.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........  ......++..|++||+..+..++
T Consensus       105 ~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~  179 (256)
T cd08529         105 RFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN--FANTIVGTPYYLSPELCEDKPYN  179 (256)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccc--hhhccccCccccCHHHhcCCCCC
Confidence            57889999999999998   99999999999999999999999998775432211  12234567889999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||||+++++|++|..||......                .....+.. ......+......+.+++.+||+.+|+
T Consensus       180 ~~~Di~slG~il~~l~~g~~p~~~~~~~----------------~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~  242 (256)
T cd08529         180 EKSDVWALGVVLYECCTGKHPFDANNQG----------------ALILKIIR-GVFPPVSQMYSQQLAQLIDQCLTKDYR  242 (256)
T ss_pred             CccchHHHHHHHHHHHhCCCCCCCCCHH----------------HHHHHHHc-CCCCCCccccCHHHHHHHHHHccCCcc
Confidence            9999999999999999999998633210                11111111 112223345667899999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.++++
T Consensus       243 ~Rp~~~~ll~  252 (256)
T cd08529         243 QRPDTFQLLR  252 (256)
T ss_pred             cCcCHHHHhh
Confidence            9999999975


No 141
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.94  E-value=3e-27  Score=185.18  Aligned_cols=171  Identities=25%  Similarity=0.318  Sum_probs=117.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcc-cccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++........... .........|++||.+.+..+
T Consensus       112 ~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  188 (284)
T cd05081         112 LYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKF  188 (284)
T ss_pred             HHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCc
Confidence            57899999999999998   99999999999999999999999999876433221111 111123346999999988888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||+|++++|+++|..++......-........ ........+.+.+........+..++..+.+++.+||..+|
T Consensus       189 ~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  267 (284)
T cd05081         189 SVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDK-QGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDP  267 (284)
T ss_pred             ChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhccccc-ccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999999987654321110000000000 00000011112222222222334566789999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++|||+.+|++.|+.+
T Consensus       268 ~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         268 SQRPSFSELALQVEAI  283 (284)
T ss_pred             hhCCCHHHHHHHHHhc
Confidence            9999999999999865


No 142
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.94  E-value=4.2e-27  Score=190.48  Aligned_cols=164  Identities=23%  Similarity=0.271  Sum_probs=113.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++||||||+||+++.++.++|+|||++......   .......++..|+|||.+.+..++
T Consensus       127 ~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~  200 (359)
T cd07876         127 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYK  200 (359)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCccccccC---ccCCCCcccCCCCCchhccCCCCC
Confidence            46889999999999998   999999999999999999999999998643211   112234568889999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccch-hhch----hhhhhh-hhhhhhhccc--ccC-------------C--
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNL-VSWS----RPFLKD-QKKFVHLVDP--LLH-------------G--  138 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~-~~~~----~~~~~~-~~~~~~~~~~--~~~-------------~--  138 (213)
                      .++|+||+||++|+|++|..||........... ....    ..+... ..........  ...             .  
T Consensus       201 ~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (359)
T cd07876         201 ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSE  280 (359)
T ss_pred             cchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccc
Confidence            999999999999999999999974432111000 0000    000000 0000000000  000             0  


Q ss_pred             -CCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          139 -RYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       139 -~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                       .........+.+++.+||..||++|||++|+++
T Consensus       281 ~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         281 SERDKLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             cccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence             011123467899999999999999999999987


No 143
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94  E-value=1.6e-27  Score=195.42  Aligned_cols=161  Identities=25%  Similarity=0.357  Sum_probs=133.8

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      |.++.||..|++||.+++   ++||||.+.|||+..+..+|++|||+++..... +........-...|.+||.+....+
T Consensus       368 lyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD-TYTAHAGAKFPIKWTAPEsLAyNtF  443 (1157)
T KOG4278|consen  368 LYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNTF  443 (1157)
T ss_pred             HHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCC-ceecccCccCcccccCccccccccc
Confidence            357899999999999998   999999999999999999999999999875322 2211222334568999999999999


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.++|||+||+++|||.+ |-.||.+-                 +-.++..++.+..+-+.|..|++.+.+||+.||+++
T Consensus       444 SiKSDVWAFGVLLWEIATYGMsPYPGi-----------------dlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~Ws  506 (1157)
T KOG4278|consen  444 SIKSDVWAFGVLLWEIATYGMSPYPGI-----------------DLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWS  506 (1157)
T ss_pred             ccchhhHHHHHHHHHHHhcCCCCCCCc-----------------cHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCC
Confidence            999999999999999976 66677411                 145667777888888889999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHhhccCC
Q 028134          160 ANFRPLINDIVVALDYLVSQRDS  182 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l~~~~~~  182 (213)
                      |.+||+++||.+.|+.+....+.
T Consensus       507 PsDRPsFaeiHqafEtmf~~sSi  529 (1157)
T KOG4278|consen  507 PSDRPSFAEIHQAFETMFSSSSI  529 (1157)
T ss_pred             cccCccHHHHHHHHHHHhccccc
Confidence            99999999999999887765543


No 144
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.94  E-value=4.2e-27  Score=187.88  Aligned_cols=143  Identities=29%  Similarity=0.353  Sum_probs=110.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.||+.||.|||+++   ++|+||||+||+++.++.++|+|||++......  ........++..|++||.+.+..++
T Consensus       100 ~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~  174 (323)
T cd05575         100 FYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--SKTTSTFCGTPEYLAPEVLRKQPYD  174 (323)
T ss_pred             HHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC--CCccccccCChhhcChhhhcCCCCC
Confidence            47899999999999998   999999999999999999999999998642111  1122334678899999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+|||||++|+|++|..||......                .....++....  ..+......+.+++.+||+.+|.
T Consensus       175 ~~~DvwslG~il~ell~g~~pf~~~~~~----------------~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~p~  236 (323)
T cd05575         175 RTVDWWCLGAVLYEMLYGLPPFYSRDTA----------------EMYDNILNKPL--RLKPNISVSARHLLEGLLQKDRT  236 (323)
T ss_pred             ccccccccchhhhhhhcCCCCCCCCCHH----------------HHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHH
Confidence            9999999999999999999999632110                11111111111  12233466789999999999999


Q ss_pred             CCCCHH
Q 028134          162 FRPLIN  167 (213)
Q Consensus       162 ~Rps~~  167 (213)
                      +||++.
T Consensus       237 ~R~~~~  242 (323)
T cd05575         237 KRLGAK  242 (323)
T ss_pred             hCCCCC
Confidence            999984


No 145
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.94  E-value=4.9e-27  Score=184.11  Aligned_cols=170  Identities=22%  Similarity=0.348  Sum_probs=118.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC-cccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT-HVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++......... .......++..|++||.+.+..+
T Consensus       113 ~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~  189 (284)
T cd05079         113 KYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKF  189 (284)
T ss_pred             HHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCC
Confidence            57889999999999998   999999999999999999999999998754322211 11123445667999999888888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||||+++|+++++..|.................. .. .......+........+..+...+.+++.+||+.+|
T Consensus       190 ~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  267 (284)
T cd05079         190 YIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQ-MT-VTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQP  267 (284)
T ss_pred             CccccchhhhhhhhhhhcCCCCCccccchhhhhccccccc-cc-HHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCc
Confidence            9999999999999999997765432111000000000000 00 001111111111222234567789999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++||++.++++.|+.+
T Consensus       268 ~~Rpt~~~il~~l~~~  283 (284)
T cd05079         268 SKRTTFQNLIEGFEAI  283 (284)
T ss_pred             ccCcCHHHHHHHHHhh
Confidence            9999999999999876


No 146
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.94  E-value=2e-27  Score=192.11  Aligned_cols=165  Identities=22%  Similarity=0.267  Sum_probs=114.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++||||||+||+++.++.++|+|||++......   .......++..|+|||.+.+..++
T Consensus       123 ~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~  196 (355)
T cd07874         123 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYK  196 (355)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcccccCCCc---cccCCccccCCccCHHHHcCCCCC
Confidence            47899999999999998   999999999999999999999999998753221   112234578899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccc-hhhch----hhhhhh-hhhhhhhccc---------------cc---C
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQN-LVSWS----RPFLKD-QKKFVHLVDP---------------LL---H  137 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~-~~~~~----~~~~~~-~~~~~~~~~~---------------~~---~  137 (213)
                      .++|+||+||++|+|++|..||.......... .+...    ..+... .......++.               ..   .
T Consensus       197 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (355)
T cd07874         197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPAD  276 (355)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccc
Confidence            99999999999999999999996433211100 00000    000000 0000000000               00   0


Q ss_pred             CCCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHHH
Q 028134          138 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       138 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                      ...+......+.+++.+||..||++|||+.|+++.
T Consensus       277 ~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         277 SEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             cccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence            00112234578899999999999999999999973


No 147
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.94  E-value=5.3e-27  Score=181.67  Aligned_cols=153  Identities=26%  Similarity=0.425  Sum_probs=115.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||.+........ .......++..|++||.+....++
T Consensus       106 ~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~  181 (260)
T cd05073         106 DFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFT  181 (260)
T ss_pred             HHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCc-ccccCCcccccccCHhHhccCCcC
Confidence            57889999999999998   99999999999999999999999998865422211 111222345679999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||......                 .....+........+......+.+++.+||+.+|
T Consensus       182 ~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  244 (260)
T cd05073         182 IKSDVWSFGILLMEIVTYGRIPYPGMSNP-----------------EVIRALERGYRMPRPENCPEELYNIMMRCWKNRP  244 (260)
T ss_pred             ccccchHHHHHHHHHHhcCCCCCCCCCHH-----------------HHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCc
Confidence            99999999999999998 88888632111                 0111111111112233455679999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDY  175 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~  175 (213)
                      ++||++.++.+.|+.
T Consensus       245 ~~Rp~~~~l~~~L~~  259 (260)
T cd05073         245 EERPTFEYIQSVLDD  259 (260)
T ss_pred             ccCcCHHHHHHHHhc
Confidence            999999999999875


No 148
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.94  E-value=3.9e-27  Score=188.55  Aligned_cols=155  Identities=28%  Similarity=0.437  Sum_probs=113.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++......  ........++..|+|||.+.+..++
T Consensus       100 ~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~  174 (329)
T cd05618         100 FYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDTTSTFCGTPNYIAPEILRGEDYG  174 (329)
T ss_pred             HHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCC--CCccccccCCccccCHHHHcCCCCC
Confidence            47889999999999998   999999999999999999999999998642111  1122335678999999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhh-hcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVH-LVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+||++|+|++|..||...........        .....+.. +...  ...++......+.+++.+||+.||
T Consensus       175 ~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~--------~~~~~~~~~i~~~--~~~~p~~~~~~~~~ll~~~L~~dP  244 (329)
T cd05618         175 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ--------NTEDYLFQVILEK--QIRIPRSLSVKAASVLKSFLNKDP  244 (329)
T ss_pred             CccceecccHHHHHHhhCCCCCccCCCcCCccc--------ccHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHhcCCH
Confidence            999999999999999999999963221111000        00011111 1111  112345566778999999999999


Q ss_pred             CCCCCH------HHHHH
Q 028134          161 NFRPLI------NDIVV  171 (213)
Q Consensus       161 ~~Rps~------~ev~~  171 (213)
                      ++||++      .++++
T Consensus       245 ~~R~~~~~~~~~~~i~~  261 (329)
T cd05618         245 KERLGCHPQTGFADIQG  261 (329)
T ss_pred             HHcCCCCCCCCHHHHhc
Confidence            999984      56654


No 149
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.94  E-value=1.7e-27  Score=193.06  Aligned_cols=164  Identities=24%  Similarity=0.331  Sum_probs=113.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++......   .......++..|+|||.+.+..++
T Consensus       130 ~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~  203 (364)
T cd07875         130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYK  203 (364)
T ss_pred             HHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCccccCCC---CcccCCcccCCcCCHHHHhCCCCC
Confidence            47899999999999998   999999999999999999999999998753221   112234578899999999988999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchh-h--------c---hhh----hhhhhh-----hhhhhccccc---C
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV-S--------W---SRP----FLKDQK-----KFVHLVDPLL---H  137 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~-~--------~---~~~----~~~~~~-----~~~~~~~~~~---~  137 (213)
                      .++|+|||||++|+|++|..||...........+ .        +   ...    +..+..     ..........   .
T Consensus       204 ~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (364)
T cd07875         204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD  283 (364)
T ss_pred             chhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCcccccccc
Confidence            9999999999999999999999644321110000 0        0   000    000000     0000000000   0


Q ss_pred             CCCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          138 GRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       138 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ..........+.+++.+||..||.+|||+.++++
T Consensus       284 ~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         284 SEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             ccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            0011123457889999999999999999999986


No 150
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.94  E-value=1.9e-27  Score=189.64  Aligned_cols=142  Identities=28%  Similarity=0.411  Sum_probs=109.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++||||||+||+++.++.++|+|||++......  ........++..|+|||.+.+..++
T Consensus       100 ~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~  174 (320)
T cd05590         100 FYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--GKTTSTFCGTPDYIAPEILQEMLYG  174 (320)
T ss_pred             HHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC--CCcccccccCccccCHHHHcCCCCC
Confidence            47889999999999998   999999999999999999999999997642111  1112334678899999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....+....  ...+......+.+++..||+.||.
T Consensus       175 ~~~DiwslG~il~el~~g~~Pf~~~~~~----------------~~~~~i~~~~--~~~~~~~~~~~~~li~~~L~~dP~  236 (320)
T cd05590         175 PSVDWWAMGVLLYEMLCGHAPFEAENED----------------DLFEAILNDE--VVYPTWLSQDAVDILKAFMTKNPT  236 (320)
T ss_pred             CccchhhhHHHHHHHhhCCCCCCCCCHH----------------HHHHHHhcCC--CCCCCCCCHHHHHHHHHHcccCHH
Confidence            9999999999999999999999632211                1111111111  122334566789999999999999


Q ss_pred             CCCCH
Q 028134          162 FRPLI  166 (213)
Q Consensus       162 ~Rps~  166 (213)
                      +||++
T Consensus       237 ~R~~~  241 (320)
T cd05590         237 MRLGS  241 (320)
T ss_pred             HCCCC
Confidence            99998


No 151
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.94  E-value=2.3e-27  Score=189.27  Aligned_cols=147  Identities=29%  Similarity=0.395  Sum_probs=113.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++||||||+||+++.++.++|+|||++.......  .......++..|+|||.+.+..++
T Consensus       100 ~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~  174 (321)
T cd05591         100 FYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VTTTTFCGTPDYIAPEILQELEYG  174 (321)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC--ccccccccCccccCHHHHcCCCCC
Confidence            47899999999999998   9999999999999999999999999886432111  112234578899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....+....  ...+..+..++.+++..||+.+|+
T Consensus       175 ~~~DvwslG~il~el~tg~~Pf~~~~~~----------------~~~~~i~~~~--~~~p~~~~~~~~~ll~~~L~~dp~  236 (321)
T cd05591         175 PSVDWWALGVLMYEMMAGQPPFEADNED----------------DLFESILHDD--VLYPVWLSKEAVSILKAFMTKNPN  236 (321)
T ss_pred             CccceechhHHHHHHhcCCCCCCCCCHH----------------HHHHHHHcCC--CCCCCCCCHHHHHHHHHHhccCHH
Confidence            9999999999999999999999633211                1111111111  112334566789999999999999


Q ss_pred             CCC-------CHHHHHH
Q 028134          162 FRP-------LINDIVV  171 (213)
Q Consensus       162 ~Rp-------s~~ev~~  171 (213)
                      +||       ++.++++
T Consensus       237 ~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         237 KRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             HcCCCCCCCCCHHHHhc
Confidence            999       7787775


No 152
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=4.5e-27  Score=195.05  Aligned_cols=167  Identities=19%  Similarity=0.250  Sum_probs=112.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+++   |+|+||||+||+++.++.++|+|||++................++..|++||.+.+..++
T Consensus       264 ~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~  340 (461)
T PHA03211        264 AVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYT  340 (461)
T ss_pred             HHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCC
Confidence            58899999999999998   999999999999999999999999998754322222222234689999999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccC-CCCccc----h---hhchhhh---hhh--hhhhhhhc----ccccCC-----C
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSK-GQGEQN----L---VSWSRPF---LKD--QKKFVHLV----DPLLHG-----R  139 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~-~~~~~~----~---~~~~~~~---~~~--~~~~~~~~----~~~~~~-----~  139 (213)
                      .++|||||||++|||++|..++.... ......    +   +......   +..  ...+....    ......     .
T Consensus       341 ~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  420 (461)
T PHA03211        341 PSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPA  420 (461)
T ss_pred             chHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcc
Confidence            99999999999999998876543221 111110    0   0000000   000  00000000    000000     0


Q ss_pred             CC--HHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          140 YP--RRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       140 ~~--~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      +.  ......+.++|..||+.||.+|||+.|+++
T Consensus       421 ~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~  454 (461)
T PHA03211        421 WTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR  454 (461)
T ss_pred             hhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence            00  123347889999999999999999999985


No 153
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.94  E-value=4e-27  Score=188.62  Aligned_cols=164  Identities=24%  Similarity=0.330  Sum_probs=114.2

Q ss_pred             hhHHHHHHHHHHhhcC-CCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCK-ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~-~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.||.|||++ +   ++|+||||+||+++.++.++|+|||++......    ......++..|+|||.+.+..+
T Consensus       107 ~~~~~i~~~l~~lH~~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~  179 (331)
T cd06649         107 KVSIAVLRGLAYLREKHQ---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHY  179 (331)
T ss_pred             HHHHHHHHHHHHHhhcCC---EEcCCCChhhEEEcCCCcEEEccCccccccccc----ccccCCCCcCcCCHhHhcCCCC
Confidence            5788999999999975 5   999999999999999999999999998653221    1223457889999999998889


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhc----------------h--------------hhhhhhhhhhhh
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW----------------S--------------RPFLKDQKKFVH  130 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~----------------~--------------~~~~~~~~~~~~  130 (213)
                      +.++|+|||||++|++++|..||..............                .              ............
T Consensus       180 ~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (331)
T cd06649         180 SVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDY  259 (331)
T ss_pred             CchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHH
Confidence            9999999999999999999999963321100000000                0              000000000000


Q ss_pred             hcccccCCCCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHHH
Q 028134          131 LVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                      ++..............++.++|.+||..||++|||+.++++.
T Consensus       260 ~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         260 IVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             HHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            111111111122456789999999999999999999999873


No 154
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.94  E-value=4.4e-27  Score=187.61  Aligned_cols=143  Identities=27%  Similarity=0.336  Sum_probs=109.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.||+.||.|||+++   ++|+||||+||+++.++.++|+|||++......  ........++..|++||.+.+..++
T Consensus       100 ~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~  174 (321)
T cd05603         100 FYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--EETTSTFCGTPEYLAPEVLRKEPYD  174 (321)
T ss_pred             HHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCC--CCccccccCCcccCCHHHhcCCCCC
Confidence            46889999999999998   999999999999999999999999987642111  1122334578899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....+....  ...+......+.+++..||+.+|.
T Consensus       175 ~~~DiwslG~il~el~~g~~pf~~~~~~----------------~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~~p~  236 (321)
T cd05603         175 RTVDWWCLGAVLYEMLYGLPPFYSRDVS----------------QMYDNILHKP--LQLPGGKTVAACDLLVGLLHKDQR  236 (321)
T ss_pred             CcCcccccchhhhhhhcCCCCCCCCCHH----------------HHHHHHhcCC--CCCCCCCCHHHHHHHHHHccCCHh
Confidence            9999999999999999999999632110                0011111111  122344566789999999999999


Q ss_pred             CCCCHH
Q 028134          162 FRPLIN  167 (213)
Q Consensus       162 ~Rps~~  167 (213)
                      +||++.
T Consensus       237 ~R~~~~  242 (321)
T cd05603         237 RRLGAK  242 (321)
T ss_pred             hcCCCC
Confidence            999864


No 155
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.94  E-value=2.9e-27  Score=189.53  Aligned_cols=153  Identities=23%  Similarity=0.224  Sum_probs=114.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++.....     ......++..|+|||.+.+..++
T Consensus       105 ~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~  176 (333)
T cd05600         105 FYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYD  176 (333)
T ss_pred             HHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCC
Confidence            47889999999999998   99999999999999999999999999875322     22334678899999999988999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||...........          -......+..............++.+++.+||..+|.
T Consensus       177 ~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~----------i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~  246 (333)
T cd05600         177 FTVDYWSLGCMLYEFLCGFPPFSGSTPNETWEN----------LKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSR  246 (333)
T ss_pred             CccceecchHHHhhhhhCCCCCCCCCHHHHHHH----------HHhccccccCCCCCccccccCHHHHHHHHHHhhChhh
Confidence            999999999999999999999964321110000          0000001111000000123467789999999999999


Q ss_pred             CCCCHHHHHHH
Q 028134          162 FRPLINDIVVA  172 (213)
Q Consensus       162 ~Rps~~ev~~~  172 (213)
                      +||+++++++.
T Consensus       247 rr~s~~~ll~h  257 (333)
T cd05600         247 RFGSLEDIKNH  257 (333)
T ss_pred             hcCCHHHHHhC
Confidence            99999999864


No 156
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.94  E-value=3.2e-27  Score=186.92  Aligned_cols=163  Identities=23%  Similarity=0.301  Sum_probs=109.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.......  .......++..|+|||.+.+ ..+
T Consensus       107 ~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  181 (303)
T cd07869         107 LFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS--HTYSNEVVTLWYRPPDVLLGSTEY  181 (303)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC--ccCCCCcccCCCCChHHHcCCCCC
Confidence            47899999999999998   9999999999999999999999999986432211  11223456889999998765 457


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh--hhhhhh-----hhccc-ccCCCCC---------HH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK--DQKKFV-----HLVDP-LLHGRYP---------RR  143 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~-~~~~~~~---------~~  143 (213)
                      +.++|+||+||++|+|++|..||........  ..........  ......     ...++ ......+         ..
T Consensus       182 ~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (303)
T cd07869         182 STCLDMWGVGCIFVEMIQGVAAFPGMKDIQD--QLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLS  259 (303)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCccHHH--HHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccC
Confidence            8889999999999999999999974321100  0000000000  000000     00000 0000000         01


Q ss_pred             HHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          144 CLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       144 ~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ....+.+++..||+.||.+|||+.++++
T Consensus       260 ~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         260 YVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             CChHHHHHHHHHhccCchhccCHHHHhc
Confidence            2356789999999999999999999984


No 157
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.94  E-value=3.2e-27  Score=189.30  Aligned_cols=149  Identities=31%  Similarity=0.372  Sum_probs=123.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +|+.|++.|+.|||++.   |+|||||+.|||++.++.++|+|||+++......  .......||+.|+.||.+.+.+|.
T Consensus       110 ~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn  184 (426)
T KOG0589|consen  110 KWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED--SLASTVVGTPYYMCPEILSDIPYN  184 (426)
T ss_pred             HHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCch--hhhheecCCCcccCHHHhCCCCCC
Confidence            68999999999999887   9999999999999999999999999998643222  245567899999999999999999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|||||||++|||.+-+.+|....-.                .-+..+. +..-...+..+..++..+|..|+..+|.
T Consensus       185 ~KSDiWsLGC~~yEm~~lk~aF~a~~m~----------------~Li~ki~-~~~~~Plp~~ys~el~~lv~~~l~~~P~  247 (426)
T KOG0589|consen  185 EKSDIWSLGCCLYEMCTLKPAFKASNMS----------------ELILKIN-RGLYSPLPSMYSSELRSLVKSMLRKNPE  247 (426)
T ss_pred             ccCcchhhcchHHHHHhcccccCccchH----------------HHHHHHh-hccCCCCCccccHHHHHHHHHHhhcCCc
Confidence            9999999999999999999988622211                1111121 2223345778889999999999999999


Q ss_pred             CCCCHHHHHHH
Q 028134          162 FRPLINDIVVA  172 (213)
Q Consensus       162 ~Rps~~ev~~~  172 (213)
                      .||++.+++..
T Consensus       248 ~RPsa~~LL~~  258 (426)
T KOG0589|consen  248 HRPSALELLRR  258 (426)
T ss_pred             cCCCHHHHhhC
Confidence            99999999985


No 158
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.94  E-value=1.5e-27  Score=190.71  Aligned_cols=147  Identities=30%  Similarity=0.417  Sum_probs=113.0

Q ss_pred             hhHHHHHHHHHHhhc-CCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHC-KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~-~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      .++.||+.||.|||+ ++   ++|+||||+||+++.++.++|+|||++.......  .......++..|+|||.+.+..+
T Consensus        99 ~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~  173 (325)
T cd05594          99 FYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDY  173 (325)
T ss_pred             HHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--cccccccCCcccCCHHHHccCCC
Confidence            467899999999997 67   9999999999999999999999999976422111  11223458899999999988889


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||+||++|+|++|..||......                .....+...  ...++......+.+++.+||+.||
T Consensus       174 ~~~~DiwslG~il~el~tG~~Pf~~~~~~----------------~~~~~i~~~--~~~~p~~~~~~~~~li~~~L~~dP  235 (325)
T cd05594         174 GRAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------KLFELILME--EIRFPRTLSPEAKSLLSGLLKKDP  235 (325)
T ss_pred             CCccccccccceeeeeccCCCCCCCCCHH----------------HHHHHHhcC--CCCCCCCCCHHHHHHHHHHhhcCH
Confidence            99999999999999999999999632211                000111111  112334456778999999999999


Q ss_pred             CCCC-----CHHHHHH
Q 028134          161 NFRP-----LINDIVV  171 (213)
Q Consensus       161 ~~Rp-----s~~ev~~  171 (213)
                      ++|+     ++.++++
T Consensus       236 ~~R~~~~~~~~~~il~  251 (325)
T cd05594         236 KQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             HHhCCCCCCCHHHHhc
Confidence            9996     8999875


No 159
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.94  E-value=3.6e-27  Score=184.42  Aligned_cols=151  Identities=23%  Similarity=0.305  Sum_probs=112.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||++.......   ......++..|++||.+.+..++
T Consensus        99 ~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~  172 (277)
T cd05607          99 HYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQRAGTNGYMAPEILKEEPYS  172 (277)
T ss_pred             HHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeeccCCCCCccCHHHHccCCCC
Confidence            46789999999999998   9999999999999999999999999987542221   12234578899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||.........            .......+...... .......++.+++..||+.||+
T Consensus       173 ~~~DvwslGv~l~el~~g~~p~~~~~~~~~~------------~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~P~  239 (277)
T cd05607         173 YPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK------------EELKRRTLEDEVKF-EHQNFTEESKDICRLFLAKKPE  239 (277)
T ss_pred             CchhHHHHHHHHHHHHhCCCCCCCCcchhhH------------HHHHHHhhcccccc-ccccCCHHHHHHHHHHhccCHh
Confidence            9999999999999999999998643221110            00011111111110 1123566789999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||+++|+++
T Consensus       240 ~R~~~~~~~~  249 (277)
T cd05607         240 DRLGSREKND  249 (277)
T ss_pred             hCCCCccchh
Confidence            9999977654


No 160
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.94  E-value=4.9e-27  Score=180.65  Aligned_cols=152  Identities=27%  Similarity=0.378  Sum_probs=114.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||+|+||+++.++.++|+|||++........ ........+..|++||...+..++
T Consensus        97 ~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~  172 (250)
T cd05085          97 KFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-SSSGLKQIPIKWTAPEALNYGRYS  172 (250)
T ss_pred             HHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceecccccc-ccCCCCCCcccccCHHHhccCCCC
Confidence            57889999999999998   99999999999999999999999999864322111 111122335679999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .+.|+||+|+++|++++ |..||.......                 ....+........+..++..+.+++.+||..+|
T Consensus       173 ~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  235 (250)
T cd05085         173 SESDVWSYGILLWETFSLGVCPYPGMTNQQ-----------------AREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKP  235 (250)
T ss_pred             chhHHHHHHHHHHHHhcCCCCCCCCCCHHH-----------------HHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCc
Confidence            99999999999999998 888885321110                 001111111222234456789999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 028134          161 NFRPLINDIVVALD  174 (213)
Q Consensus       161 ~~Rps~~ev~~~L~  174 (213)
                      ++||++.|+.+.|.
T Consensus       236 ~~Rp~~~~l~~~l~  249 (250)
T cd05085         236 ENRPKFSELQKELA  249 (250)
T ss_pred             ccCCCHHHHHHHhc
Confidence            99999999999875


No 161
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.94  E-value=2.7e-27  Score=182.61  Aligned_cols=149  Identities=26%  Similarity=0.285  Sum_probs=114.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+++   ++|+||+|+||+++.++.++++|||.+.......  .......++..|++||.+.+..++
T Consensus       104 ~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~  178 (255)
T cd08219         104 QWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG--AYACTYVGTPYYVPPEIWENMPYN  178 (255)
T ss_pred             HHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccc--cccccccCCccccCHHHHccCCcC
Confidence            57899999999999998   9999999999999999999999999987542211  112234567889999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++|+|++|..||......                .... .+........+......+.+++.+||+.+|+
T Consensus       179 ~~~Dv~slG~i~~~l~~g~~p~~~~~~~----------------~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  241 (255)
T cd08219         179 NKSDIWSLGCILYELCTLKHPFQANSWK----------------NLIL-KVCQGSYKPLPSHYSYELRSLIKQMFKRNPR  241 (255)
T ss_pred             chhhhhhhchhheehhhccCCCCCCCHH----------------HHHH-HHhcCCCCCCCcccCHHHHHHHHHHHhCCcc
Confidence            9999999999999999999999632110                0001 1111111123344566789999999999999


Q ss_pred             CCCCHHHHHHH
Q 028134          162 FRPLINDIVVA  172 (213)
Q Consensus       162 ~Rps~~ev~~~  172 (213)
                      +||++.+|+..
T Consensus       242 ~Rp~~~~il~~  252 (255)
T cd08219         242 SRPSATTILSR  252 (255)
T ss_pred             cCCCHHHHhhc
Confidence            99999999764


No 162
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.94  E-value=2.5e-27  Score=184.25  Aligned_cols=157  Identities=25%  Similarity=0.262  Sum_probs=109.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS----   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~----   77 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++++|||++................++..|++||....    
T Consensus       104 ~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  180 (269)
T cd05042         104 RMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQD  180 (269)
T ss_pred             HHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhcccc
Confidence            57889999999999998   99999999999999999999999999864322211111122334567999998642    


Q ss_pred             ---CCCCCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHH
Q 028134           78 ---GKLTLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTA  153 (213)
Q Consensus        78 ---~~~~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  153 (213)
                         ..++.++|+||+||++|+|++ |..||........          ..  ........+......+..+...+.+++.
T Consensus       181 ~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (269)
T cd05042         181 LLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV----------LK--QVVREQDIKLPKPQLDLKYSDRWYEVMQ  248 (269)
T ss_pred             ccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH----------HH--HHhhccCccCCCCcccccCCHHHHHHHH
Confidence               345789999999999999998 7778753211100          00  0000000011111223355667788889


Q ss_pred             hhcCcCCCCCCCHHHHHHHHH
Q 028134          154 MCLNEEANFRPLINDIVVALD  174 (213)
Q Consensus       154 ~cl~~~p~~Rps~~ev~~~L~  174 (213)
                      .|| .+|++||++++|++.|.
T Consensus       249 ~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         249 FCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             HHh-cCcccccCHHHHHHHhc
Confidence            999 59999999999998873


No 163
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.94  E-value=2.1e-27  Score=187.03  Aligned_cols=144  Identities=29%  Similarity=0.358  Sum_probs=112.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++......     .....++..|+|||.+.+..++
T Consensus       105 ~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~  176 (291)
T cd05612         105 FYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-----TWTLCGTPEYLAPEVIQSKGHN  176 (291)
T ss_pred             HHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC-----cccccCChhhcCHHHHcCCCCC
Confidence            47899999999999998   999999999999999999999999998753221     1234578899999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+|||||++|+|++|..||......                .....+....  ..++......+.+++..||+.||.
T Consensus       177 ~~~DiwSlG~il~~l~~g~~pf~~~~~~----------------~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~dp~  238 (291)
T cd05612         177 KAVDWWALGILIYEMLVGYPPFFDDNPF----------------GIYEKILAGK--LEFPRHLDLYAKDLIKKLLVVDRT  238 (291)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHH----------------HHHHHHHhCC--cCCCccCCHHHHHHHHHHcCCCHH
Confidence            9999999999999999999999632211                0111111111  123344566789999999999999


Q ss_pred             CCCC-----HHHHHH
Q 028134          162 FRPL-----INDIVV  171 (213)
Q Consensus       162 ~Rps-----~~ev~~  171 (213)
                      +||+     +.++++
T Consensus       239 ~R~~~~~~~~~~~l~  253 (291)
T cd05612         239 RRLGNMKNGADDVKN  253 (291)
T ss_pred             HccCCccCCHHHHhc
Confidence            9995     888775


No 164
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.94  E-value=3.8e-27  Score=182.34  Aligned_cols=153  Identities=27%  Similarity=0.435  Sum_probs=115.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|+.|||+++   ++|+||+|+||+++.++.++++|||.+....... .........+..|++||...+..++
T Consensus       107 ~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~  182 (261)
T cd05034         107 DMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDE-YTAREGAKFPIKWTAPEAANYGRFT  182 (261)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchh-hhhhhccCCCccccCHHHhccCCcC
Confidence            57889999999999998   9999999999999999999999999987543211 1111122234679999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|++++++++ |..||......                .....+ ........+...+..+.+++.+||..+|
T Consensus       183 ~~~Di~slG~il~~l~t~g~~p~~~~~~~----------------~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p  245 (261)
T cd05034         183 IKSDVWSFGILLTEIVTYGRVPYPGMTNR----------------EVLEQV-ERGYRMPRPPNCPEELYDLMLQCWDKDP  245 (261)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCCHH----------------HHHHHH-HcCCCCCCCCCCCHHHHHHHHHHcccCc
Confidence            99999999999999998 89888532110                111111 1111122233446679999999999999


Q ss_pred             CCCCCHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDY  175 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~  175 (213)
                      ++||+++++.+.|+.
T Consensus       246 ~~Rp~~~~l~~~l~~  260 (261)
T cd05034         246 EERPTFEYLQSFLED  260 (261)
T ss_pred             ccCCCHHHHHHHHhc
Confidence            999999999999875


No 165
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.94  E-value=1.7e-27  Score=179.62  Aligned_cols=135  Identities=28%  Similarity=0.411  Sum_probs=111.4

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL   82 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~   82 (213)
                      ++.||+.||+|||+++   |++||+||+|||++++|.+|+.|||++...     ........||+.|+|||.+...++..
T Consensus       149 YAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v-----~~rT~TlCGTPeYLAPEii~sk~ynk  220 (355)
T KOG0616|consen  149 YAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRV-----SGRTWTLCGTPEYLAPEIIQSKGYNK  220 (355)
T ss_pred             HHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEe-----cCcEEEecCCccccChHHhhcCCCCc
Confidence            5789999999999999   999999999999999999999999999863     22355678999999999999999999


Q ss_pred             ccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCCC
Q 028134           83 KSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANF  162 (213)
Q Consensus        83 ~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  162 (213)
                      ++|.|+||+++|||+.|.+||....+.                .....++...+  .+|.-....+.+|+...|+.|-.+
T Consensus       221 avDWWalGVLIYEMlaG~pPF~~~~~~----------------~iY~KI~~~~v--~fP~~fs~~~kdLl~~LL~vD~t~  282 (355)
T KOG0616|consen  221 AVDWWALGVLIYEMLAGYPPFYDDNPI----------------QIYEKILEGKV--KFPSYFSSDAKDLLKKLLQVDLTK  282 (355)
T ss_pred             chhHHHHHHHHHHHHcCCCCCcCCChH----------------HHHHHHHhCcc--cCCcccCHHHHHHHHHHHhhhhHh
Confidence            999999999999999999999633321                11122222222  356667778899999999999998


Q ss_pred             C
Q 028134          163 R  163 (213)
Q Consensus       163 R  163 (213)
                      |
T Consensus       283 R  283 (355)
T KOG0616|consen  283 R  283 (355)
T ss_pred             h
Confidence            8


No 166
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.94  E-value=3e-27  Score=188.40  Aligned_cols=147  Identities=30%  Similarity=0.452  Sum_probs=113.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.......  .......++..|++||.+.+..++
T Consensus       100 ~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~  174 (318)
T cd05570         100 FYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--VTTSTFCGTPDYIAPEILSYQPYG  174 (318)
T ss_pred             HHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC--CcccceecCccccCHHHhcCCCCC
Confidence            47889999999999998   9999999999999999999999999876421111  112234578899999999988999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....+....  ..++......+.+++.+||+.||.
T Consensus       175 ~~~DiwslGvil~~l~~G~~pf~~~~~~----------------~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~dP~  236 (318)
T cd05570         175 PAVDWWALGVLLYEMLAGQSPFEGDDED----------------ELFQSILEDE--VRYPRWLSKEAKSILKSFLTKNPE  236 (318)
T ss_pred             cchhhhhHHHHHHHHhhCCCCCCCCCHH----------------HHHHHHHcCC--CCCCCcCCHHHHHHHHHHccCCHH
Confidence            9999999999999999999999632211                0011111111  122344567889999999999999


Q ss_pred             CCCCH-----HHHHH
Q 028134          162 FRPLI-----NDIVV  171 (213)
Q Consensus       162 ~Rps~-----~ev~~  171 (213)
                      +||++     .++++
T Consensus       237 ~R~s~~~~~~~~ll~  251 (318)
T cd05570         237 KRLGCLPTGEQDIKG  251 (318)
T ss_pred             HcCCCCCCCHHHHhc
Confidence            99999     77765


No 167
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.94  E-value=3.8e-27  Score=188.24  Aligned_cols=142  Identities=30%  Similarity=0.453  Sum_probs=110.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.......  .......++..|+|||.+.+..++
T Consensus       105 ~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~  179 (324)
T cd05587         105 FYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG--KTTRTFCGTPDYIAPEIIAYQPYG  179 (324)
T ss_pred             HHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCCC--CceeeecCCccccChhhhcCCCCC
Confidence            47889999999999998   9999999999999999999999999876421111  112234678999999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....+...  ...++......+.+++.+||..+|.
T Consensus       180 ~~~DiwslGvil~elltG~~pf~~~~~~----------------~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~P~  241 (324)
T cd05587         180 KSVDWWAFGVLLYEMLAGQPPFDGEDED----------------ELFQSIMEH--NVSYPKSLSKEAVSICKGLLTKHPA  241 (324)
T ss_pred             cccchhhhHHHHHHHHhCCCCCCCCCHH----------------HHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHH
Confidence            9999999999999999999999632211                111111111  1223445567889999999999999


Q ss_pred             CCCCH
Q 028134          162 FRPLI  166 (213)
Q Consensus       162 ~Rps~  166 (213)
                      +|++.
T Consensus       242 ~R~~~  246 (324)
T cd05587         242 KRLGC  246 (324)
T ss_pred             HcCCC
Confidence            99986


No 168
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.94  E-value=3.9e-27  Score=189.85  Aligned_cols=151  Identities=25%  Similarity=0.280  Sum_probs=114.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCC--------------------------
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGD--------------------------   55 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--------------------------   55 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.......                          
T Consensus       105 ~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (350)
T cd05573         105 FYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHK  181 (350)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccc
Confidence            47899999999999998   9999999999999999999999999987543222                          


Q ss_pred             -CCcccccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcc-
Q 028134           56 -NTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVD-  133 (213)
Q Consensus        56 -~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  133 (213)
                       .........++..|+|||.+.+..++.++|||||||++|+|++|..||......                .....+.. 
T Consensus       182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~----------------~~~~~i~~~  245 (350)
T cd05573         182 QRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ----------------ETYNKIINW  245 (350)
T ss_pred             cccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH----------------HHHHHHhcc
Confidence             001122346789999999999889999999999999999999999999643311                11111111 


Q ss_pred             -cccCCCCCHHHHHHHHHHHHhhcCcCCCCCCC-HHHHHHH
Q 028134          134 -PLLHGRYPRRCLNYAVAVTAMCLNEEANFRPL-INDIVVA  172 (213)
Q Consensus       134 -~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps-~~ev~~~  172 (213)
                       ..............+.++|..|+. +|.+||+ ++++++.
T Consensus       246 ~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         246 KESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             CCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence             111111111256788999999997 9999999 9999873


No 169
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.94  E-value=4.8e-27  Score=183.94  Aligned_cols=151  Identities=28%  Similarity=0.395  Sum_probs=114.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++........  ......++..|++||.+.+..++
T Consensus       101 ~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~  175 (280)
T cd05608         101 FYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTKGYAGTPGFMAPELLQGEEYD  175 (280)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--cccccCCCcCccCHHHhcCCCCC
Confidence            47899999999999998   99999999999999999999999999865432211  12234578899999999988999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++|+|++|..||.........            ......+....  ..++..+...+.+++..||+.||+
T Consensus       176 ~~~DvwslG~il~el~~g~~pf~~~~~~~~~------------~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~  241 (280)
T cd05608         176 FSVDYFALGVTLYEMIAARGPFRARGEKVEN------------KELKQRILNDS--VTYPDKFSPASKSFCEALLAKDPE  241 (280)
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCCCcchhH------------HHHHHhhcccC--CCCcccCCHHHHHHHHHHhcCCHH
Confidence            9999999999999999999999643221110            00111111111  123345667889999999999999


Q ss_pred             CCC-----CHHHHHH
Q 028134          162 FRP-----LINDIVV  171 (213)
Q Consensus       162 ~Rp-----s~~ev~~  171 (213)
                      +||     +++++++
T Consensus       242 ~R~~~~~~~~~~~l~  256 (280)
T cd05608         242 KRLGFRDGNCDGLRT  256 (280)
T ss_pred             HhcCCCCCCHHHHhc
Confidence            999     6677765


No 170
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.94  E-value=4.4e-27  Score=187.30  Aligned_cols=147  Identities=32%  Similarity=0.463  Sum_probs=112.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++.......  .......++..|+|||.+.+..++
T Consensus       100 ~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~  174 (316)
T cd05619         100 FYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--AKTCTFCGTPDYIAPEILLGQKYN  174 (316)
T ss_pred             HHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--CceeeecCCccccCHHHHcCCCCC
Confidence            47899999999999998   9999999999999999999999999986421111  112334578899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                 .....+... ...++......+.+++..||+.+|+
T Consensus       175 ~~~DvwslG~il~el~~G~~pf~~~~~~-----------------~~~~~i~~~-~~~~~~~~~~~~~~li~~~l~~~P~  236 (316)
T cd05619         175 TSVDWWSFGVLLYEMLIGQSPFHGHDEE-----------------ELFQSIRMD-NPCYPRWLTREAKDILVKLFVREPE  236 (316)
T ss_pred             chhhhhhHHHHHHHHHhCCCCCCCCCHH-----------------HHHHHHHhC-CCCCCccCCHHHHHHHHHHhccCHh
Confidence            9999999999999999999999632211                 000001000 1112334556788999999999999


Q ss_pred             CCCCHH-HHHH
Q 028134          162 FRPLIN-DIVV  171 (213)
Q Consensus       162 ~Rps~~-ev~~  171 (213)
                      +||++. ++.+
T Consensus       237 ~R~~~~~~l~~  247 (316)
T cd05619         237 RRLGVKGDIRQ  247 (316)
T ss_pred             hcCCChHHHHc
Confidence            999997 5543


No 171
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.94  E-value=6.9e-27  Score=187.15  Aligned_cols=154  Identities=29%  Similarity=0.434  Sum_probs=114.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++......  ........++..|+|||.+.+..++
T Consensus       100 ~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~  174 (329)
T cd05588         100 FYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP--GDTTSTFCGTPNYIAPEILRGEDYG  174 (329)
T ss_pred             HHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC--CCccccccCCccccCHHHHcCCCCC
Confidence            47889999999999998   999999999999999999999999988642111  1122335678899999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCC--ccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQG--EQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      .++|+||+||++|+|++|..||+......  ......+         ....+....  ...+..+...+.+++..||+.|
T Consensus       175 ~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~---------~~~~~~~~~--~~~p~~~~~~~~~li~~~L~~d  243 (329)
T cd05588         175 FSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDY---------LFQVILEKQ--IRIPRSLSVKASSVLKGFLNKD  243 (329)
T ss_pred             CccceechHHHHHHHHHCCCCcccccccccccccchHH---------HHHHHHcCC--CCCCCCCCHHHHHHHHHHhccC
Confidence            99999999999999999999997432221  1100000         011111111  1234455677899999999999


Q ss_pred             CCCCCC------HHHHHH
Q 028134          160 ANFRPL------INDIVV  171 (213)
Q Consensus       160 p~~Rps------~~ev~~  171 (213)
                      |.+|++      ++++++
T Consensus       244 P~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         244 PKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             HHHcCCCCCCCCHHHHhc
Confidence            999997      567654


No 172
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.94  E-value=5.1e-27  Score=183.60  Aligned_cols=170  Identities=25%  Similarity=0.359  Sum_probs=120.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcc-cccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      .++.|++.||.|||+++   ++|+||+|+||+++.++.++|+|||.+........... .....++..|++||...+..+
T Consensus       113 ~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~  189 (284)
T cd05038         113 LFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKF  189 (284)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCC
Confidence            57899999999999998   99999999999999999999999999876532211111 111234456999999888888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||||+++++|++|..|+......... ..... ........+...+........+..+...+.+++.+||+.+|
T Consensus       190 ~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  267 (284)
T cd05038         190 SSASDVWSFGVTLYELFTYGDPSQSPPAEFLR-MIGIA-QGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEP  267 (284)
T ss_pred             CcccchHHHhhhhheeeccCCCcccccchhcc-ccccc-cccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccCh
Confidence            99999999999999999999887532211100 00000 00000111122222222222344566789999999999999


Q ss_pred             CCCCCHHHHHHHHHHH
Q 028134          161 NFRPLINDIVVALDYL  176 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l  176 (213)
                      ++||++.||+++|+++
T Consensus       268 ~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         268 QDRPSFADLILIVDRL  283 (284)
T ss_pred             hhCCCHHHHHHHHhhc
Confidence            9999999999999876


No 173
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.94  E-value=4.1e-27  Score=187.95  Aligned_cols=147  Identities=29%  Similarity=0.416  Sum_probs=113.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.......  .......++..|+|||.+.+..++
T Consensus       105 ~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~  179 (323)
T cd05616         105 FYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG--VTTKTFCGTPDYIAPEIIAYQPYG  179 (323)
T ss_pred             HHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCCC--CccccCCCChhhcCHHHhcCCCCC
Confidence            47899999999999998   9999999999999999999999999986422111  112234578899999999988999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....+....  ..++......+.+++.+||+.+|+
T Consensus       180 ~~~DiwSlGvil~elltg~~Pf~~~~~~----------------~~~~~i~~~~--~~~p~~~s~~~~~li~~~l~~~p~  241 (323)
T cd05616         180 KSVDWWAFGVLLYEMLAGQAPFEGEDED----------------ELFQSIMEHN--VAYPKSMSKEAVAICKGLMTKHPG  241 (323)
T ss_pred             CccchhchhHHHHHHHhCCCCCCCCCHH----------------HHHHHHHhCC--CCCCCcCCHHHHHHHHHHcccCHH
Confidence            9999999999999999999999632211                1111111111  123445667889999999999999


Q ss_pred             CCCCH-----HHHHH
Q 028134          162 FRPLI-----NDIVV  171 (213)
Q Consensus       162 ~Rps~-----~ev~~  171 (213)
                      +|++.     .++.+
T Consensus       242 ~R~~~~~~~~~~i~~  256 (323)
T cd05616         242 KRLGCGPEGERDIKE  256 (323)
T ss_pred             hcCCCCCCCHHHHhc
Confidence            99985     56553


No 174
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.94  E-value=6.9e-27  Score=174.93  Aligned_cols=149  Identities=30%  Similarity=0.402  Sum_probs=115.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc---cC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SG   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~   78 (213)
                      ++...++.||.||..+.  +|+|||+||+|||++..|.+|+||||.+.+.-+   ........|...|++||.+.   ..
T Consensus       195 k~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd---SkAhtrsAGC~~YMaPERidp~~~~  269 (391)
T KOG0983|consen  195 KMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVD---SKAHTRSAGCAAYMAPERIDPPDKP  269 (391)
T ss_pred             hhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeec---ccccccccCCccccCccccCCCCCC
Confidence            45677899999998754  399999999999999999999999999875422   22234456788999999875   34


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCC--HHHHHHHHHHHHhhc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYP--RRCLNYAVAVTAMCL  156 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl  156 (213)
                      +|+-++||||||+.++|+.+|+.||.+....-               ..+..+++... +.++  ....+.|.+++..||
T Consensus       270 kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF---------------e~ltkvln~eP-P~L~~~~gFSp~F~~fv~~CL  333 (391)
T KOG0983|consen  270 KYDIRADVWSLGITLVELATGQYPYKGCKTDF---------------EVLTKVLNEEP-PLLPGHMGFSPDFQSFVKDCL  333 (391)
T ss_pred             ccchhhhhhhhccchhhhhcccCCCCCCCccH---------------HHHHHHHhcCC-CCCCcccCcCHHHHHHHHHHh
Confidence            67889999999999999999999998554432               22333333211 2222  236789999999999


Q ss_pred             CcCCCCCCCHHHHHH
Q 028134          157 NEEANFRPLINDIVV  171 (213)
Q Consensus       157 ~~~p~~Rps~~ev~~  171 (213)
                      ..|+.+||...++++
T Consensus       334 ~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  334 TKDHRKRPKYNKLLE  348 (391)
T ss_pred             hcCcccCcchHHHhc
Confidence            999999999999876


No 175
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.94  E-value=2.1e-27  Score=189.75  Aligned_cols=146  Identities=27%  Similarity=0.333  Sum_probs=111.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.||++||.|||+++   ++||||||+||+++.++.++|+|||++......  ........++..|++||.+.+..++
T Consensus       100 ~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~  174 (325)
T cd05602         100 FYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--NGTTSTFCGTPEYLAPEVLHKQPYD  174 (325)
T ss_pred             HHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccC--CCCcccccCCccccCHHHHcCCCCC
Confidence            36899999999999998   999999999999999999999999998642211  1122335688999999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....+.....  ..+......+.+++..||+.+|.
T Consensus       175 ~~~DiwslG~il~el~~g~~pf~~~~~~----------------~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~p~  236 (325)
T cd05602         175 RTVDWWCLGAVLYEMLYGLPPFYSRNTA----------------EMYDNILNKPL--QLKPNITNSARHLLEGLLQKDRT  236 (325)
T ss_pred             CccccccccHHHHHHhcCCCCCCCCCHH----------------HHHHHHHhCCc--CCCCCCCHHHHHHHHHHcccCHH
Confidence            9999999999999999999999632211                00111111111  12234566789999999999999


Q ss_pred             CCCCHHHHH
Q 028134          162 FRPLINDIV  170 (213)
Q Consensus       162 ~Rps~~ev~  170 (213)
                      +||++.+..
T Consensus       237 ~R~~~~~~~  245 (325)
T cd05602         237 KRLGAKDDF  245 (325)
T ss_pred             HCCCCCCCH
Confidence            999987443


No 176
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.94  E-value=8.5e-27  Score=186.47  Aligned_cols=149  Identities=30%  Similarity=0.423  Sum_probs=111.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.||+.||+|||+++   ++|+||||+||+++.++.++|+|||++......  ........++..|+|||.+.+..++
T Consensus       100 ~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~  174 (327)
T cd05617         100 FYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--GDTTSTFCGTPNYIAPEILRGEEYG  174 (327)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCC--CCceecccCCcccCCHHHHCCCCCC
Confidence            47899999999999998   999999999999999999999999998642111  1122335678899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||..............         ....+...  ....+......+.+++.+||..||.
T Consensus       175 ~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~---------~~~~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~  243 (327)
T cd05617         175 FSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDY---------LFQVILEK--PIRIPRFLSVKASHVLKGFLNKDPK  243 (327)
T ss_pred             chheeehhHHHHHHHHhCCCCCCccCCCcccccHHH---------HHHHHHhC--CCCCCCCCCHHHHHHHHHHhccCHH
Confidence            999999999999999999999964332222111110         01111111  1123444567789999999999999


Q ss_pred             CCCCH
Q 028134          162 FRPLI  166 (213)
Q Consensus       162 ~Rps~  166 (213)
                      +|+++
T Consensus       244 ~R~~~  248 (327)
T cd05617         244 ERLGC  248 (327)
T ss_pred             HcCCC
Confidence            99985


No 177
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.94  E-value=1.1e-26  Score=179.40  Aligned_cols=148  Identities=24%  Similarity=0.345  Sum_probs=114.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.|+++||+.+   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||...+..++
T Consensus       106 ~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  180 (257)
T cd08223         106 EWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC--DMASTLIGTPYYMSPELFSNKPYN  180 (257)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC--CccccccCCcCccChhHhcCCCCC
Confidence            57899999999999998   9999999999999999999999999987542211  122234567889999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|++++++++|..||......                .....+... .....+......+.+++.+||+.+|+
T Consensus       181 ~~~Dv~slG~il~~l~~g~~~~~~~~~~----------------~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~  243 (257)
T cd08223         181 YKSDVWALGCCVYEMATLKHAFNAKDMN----------------SLVYRIIEG-KLPPMPKDYSPELGELIATMLSKRPE  243 (257)
T ss_pred             chhhhHHHHHHHHHHHcCCCCCCCCCHH----------------HHHHHHHhc-CCCCCccccCHHHHHHHHHHhccCcc
Confidence            9999999999999999999998632110                000111111 11123445667899999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.++++
T Consensus       244 ~Rp~~~~~l~  253 (257)
T cd08223         244 KRPSVKSILR  253 (257)
T ss_pred             cCCCHHHHhc
Confidence            9999999975


No 178
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.94  E-value=4.3e-27  Score=187.19  Aligned_cols=152  Identities=28%  Similarity=0.379  Sum_probs=119.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC---cccccccccccccCccccccC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT---HVSTRVMGTYGYCAPEYAMSG   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~Pe~~~~~   78 (213)
                      +++++++.||+|||.++   |+||||||+|+|++.+|.+||+|||.+..+......   .......||+.|+|||.+.++
T Consensus       214 ~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~  290 (576)
T KOG0585|consen  214 KYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGG  290 (576)
T ss_pred             HHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCC
Confidence            57889999999999999   999999999999999999999999999865333222   222346799999999988863


Q ss_pred             C----CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHh
Q 028134           79 K----LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM  154 (213)
Q Consensus        79 ~----~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  154 (213)
                      .    .+.+.||||+|+.+|-++.|..||.....                ......+++..+......+....+.++|.+
T Consensus       291 ~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~----------------~~l~~KIvn~pL~fP~~pe~~e~~kDli~~  354 (576)
T KOG0585|consen  291 NSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE----------------LELFDKIVNDPLEFPENPEINEDLKDLIKR  354 (576)
T ss_pred             CCccccchhhhhhhhhhhHHHhhhccCCcccchH----------------HHHHHHHhcCcccCCCcccccHHHHHHHHH
Confidence            2    35889999999999999999999952211                122333444444433334567789999999


Q ss_pred             hcCcCCCCCCCHHHHHHH
Q 028134          155 CLNEEANFRPLINDIVVA  172 (213)
Q Consensus       155 cl~~~p~~Rps~~ev~~~  172 (213)
                      ||+.||++|.++.+|...
T Consensus       355 lL~KdP~~Ri~l~~ik~H  372 (576)
T KOG0585|consen  355 LLEKDPEQRITLPDIKLH  372 (576)
T ss_pred             HhhcChhheeehhhheec
Confidence            999999999999999753


No 179
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.94  E-value=1e-26  Score=180.67  Aligned_cols=155  Identities=26%  Similarity=0.374  Sum_probs=116.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCccc-ccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVS-TRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.|++|||+++   ++|+||||+||+++.++.++++|||++............ .....+..|++||.+.+..+
T Consensus       110 ~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~  186 (267)
T cd05066         110 GMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF  186 (267)
T ss_pred             HHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCcc
Confidence            57889999999999998   999999999999999999999999998764332211111 11122457999999988889


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.+.|+|+||+++|++++ |..||.......                ....+.+ ......+..++..+.+++.+||+.+
T Consensus       187 ~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~----------------~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~  249 (267)
T cd05066         187 TSASDVWSYGIVMWEVMSYGERPYWEMSNQD----------------VIKAIEE-GYRLPAPMDCPAALHQLMLDCWQKD  249 (267)
T ss_pred             CchhhhHHHHHHHHHHhcCCCCCcccCCHHH----------------HHHHHhC-CCcCCCCCCCCHHHHHHHHHHcccC
Confidence            999999999999999886 998886322111                0011111 1111223345667899999999999


Q ss_pred             CCCCCCHHHHHHHHHHH
Q 028134          160 ANFRPLINDIVVALDYL  176 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l  176 (213)
                      |.+||++.++++.|+++
T Consensus       250 p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         250 RNERPKFEQIVSILDKL  266 (267)
T ss_pred             chhCCCHHHHHHHHHhh
Confidence            99999999999999875


No 180
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.94  E-value=2.8e-27  Score=193.56  Aligned_cols=147  Identities=25%  Similarity=0.372  Sum_probs=116.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC-CCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN-DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +|++||++||.|||++ .|||+|||||.+||||+. -|.+||+|+|++...    ........+||+.|||||... ..|
T Consensus       147 ~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~----r~s~aksvIGTPEFMAPEmYE-E~Y  220 (632)
T KOG0584|consen  147 SWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL----RKSHAKSVIGTPEFMAPEMYE-ENY  220 (632)
T ss_pred             HHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHh----hccccceeccCccccChHHHh-hhc
Confidence            6999999999999999 689999999999999965 589999999999853    222233478999999999665 789


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCC-CCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR-YPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~  159 (213)
                      +...||||||++++||+++.+||.....                ..++..-+-....+. +..-..+++.++|..|+.. 
T Consensus       221 nE~VDVYaFGMCmLEMvT~eYPYsEC~n----------------~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-  283 (632)
T KOG0584|consen  221 NELVDVYAFGMCMLEMVTSEYPYSECTN----------------PAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-  283 (632)
T ss_pred             chhhhhhhhhHHHHHHHhccCChhhhCC----------------HHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-
Confidence            9999999999999999999999963221                233333333222221 2223356899999999999 


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      ..+|||+.|+++
T Consensus       284 ~~~R~sa~eLL~  295 (632)
T KOG0584|consen  284 KSERLSAKELLK  295 (632)
T ss_pred             chhccCHHHHhh
Confidence            999999999987


No 181
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.94  E-value=8.4e-27  Score=187.56  Aligned_cols=162  Identities=23%  Similarity=0.328  Sum_probs=110.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++......     .....++..|+|||.+.+ ..+
T Consensus       122 ~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~  193 (343)
T cd07878         122 FLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHY  193 (343)
T ss_pred             HHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCccceecCCC-----cCCccccccccCchHhcCCccC
Confidence            47899999999999998   999999999999999999999999998753221     123457889999998876 467


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchh-hchh----hhhh--hhhhhhhhcccc--c-CCC---CCHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV-SWSR----PFLK--DQKKFVHLVDPL--L-HGR---YPRRCLNY  147 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~-~~~~----~~~~--~~~~~~~~~~~~--~-~~~---~~~~~~~~  147 (213)
                      +.++|+||+||++|+|++|..||............ ....    ....  ........+...  . ...   ......+.
T Consensus       194 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (343)
T cd07878         194 NQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPL  273 (343)
T ss_pred             CchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHH
Confidence            89999999999999999999999643211100000 0000    0000  000000000000  0 000   00122345


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      +.+++.+||..||.+|||+.|+++
T Consensus       274 ~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         274 AIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhc
Confidence            789999999999999999999986


No 182
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.94  E-value=9.4e-27  Score=185.12  Aligned_cols=102  Identities=30%  Similarity=0.423  Sum_probs=83.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceee----CCCCceEEeeeecccccCCCCCC-cccccccccccccCccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILL----DNDFNPKLSDFGLAKLGPVGDNT-HVSTRVMGTYGYCAPEYAM   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~----~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~   76 (213)
                      +++.|++.||.|||+++   ++|+||||+||++    +.++.++|+|||++......... .......++..|+|||.+.
T Consensus       112 ~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  188 (317)
T cd07867         112 SLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL  188 (317)
T ss_pred             HHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhc
Confidence            57889999999999998   9999999999999    56678999999998764322211 1122345688999999887


Q ss_pred             cC-CCCCccceeeHHHHHHHHHhCCCCcccc
Q 028134           77 SG-KLTLKSDIYSFGVVLLELITGRKAMDLS  106 (213)
Q Consensus        77 ~~-~~~~~~Di~slG~~~~~l~~g~~p~~~~  106 (213)
                      +. .++.++|+||+||++|+|++|..||...
T Consensus       189 ~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         189 GARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             CCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            64 5788999999999999999999999643


No 183
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.94  E-value=1.1e-27  Score=190.76  Aligned_cols=144  Identities=28%  Similarity=0.344  Sum_probs=111.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.......  .......++..|++||.+.+..++
T Consensus       102 ~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~  176 (318)
T cd05582         102 FYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHT  176 (318)
T ss_pred             HHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--CceecccCChhhcCHHHHcCCCCC
Confidence            57899999999999998   9999999999999999999999999987532211  112235678899999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+|||||++|+|++|..||......                .....+....  ..++......+.+++.+||+.||+
T Consensus       177 ~~~DiwslG~il~el~tg~~p~~~~~~~----------------~~~~~i~~~~--~~~p~~~~~~~~~li~~~l~~~P~  238 (318)
T cd05582         177 QSADWWSFGVLMFEMLTGSLPFQGKDRK----------------ETMTMILKAK--LGMPQFLSPEAQSLLRALFKRNPA  238 (318)
T ss_pred             CccceeccceEeeeeccCCCCCCCCCHH----------------HHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhcCHh
Confidence            9999999999999999999999632211                1111111111  123444567789999999999999


Q ss_pred             CCCCHHH
Q 028134          162 FRPLIND  168 (213)
Q Consensus       162 ~Rps~~e  168 (213)
                      +||++.+
T Consensus       239 ~R~~a~~  245 (318)
T cd05582         239 NRLGAGP  245 (318)
T ss_pred             HcCCCCC
Confidence            9999554


No 184
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.94  E-value=1.2e-26  Score=180.58  Aligned_cols=157  Identities=20%  Similarity=0.287  Sum_probs=108.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS----   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~----   77 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++................++..|++||.+..    
T Consensus       103 ~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  179 (268)
T cd05086         103 RMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGG  179 (268)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCc
Confidence            46789999999999998   99999999999999999999999998753211111111223456778999998743    


Q ss_pred             ---CCCCCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHH
Q 028134           78 ---GKLTLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTA  153 (213)
Q Consensus        78 ---~~~~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  153 (213)
                         ..++.++|+||||+++|+|++ |..||.......   ...   ....  +......++    .........+.+++.
T Consensus       180 ~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~---~~~---~~~~--~~~~~~~~~----~~~~~~~~~~~~l~~  247 (268)
T cd05086         180 LITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE---VLN---HVIK--DQQVKLFKP----QLELPYSERWYEVLQ  247 (268)
T ss_pred             cccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH---HHH---HHHh--hcccccCCC----ccCCCCcHHHHHHHH
Confidence               235678999999999999987 456774221110   000   0000  111111222    222334567888999


Q ss_pred             hhcCcCCCCCCCHHHHHHHHH
Q 028134          154 MCLNEEANFRPLINDIVVALD  174 (213)
Q Consensus       154 ~cl~~~p~~Rps~~ev~~~L~  174 (213)
                      .|| .+|++||++++|++.|.
T Consensus       248 ~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         248 FCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             HHh-hCcccCCCHHHHHHHhc
Confidence            999 67999999999998874


No 185
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.94  E-value=1.4e-26  Score=181.14  Aligned_cols=155  Identities=24%  Similarity=0.358  Sum_probs=114.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.|+.|||+.+   ++|+||||+||+++.++.++|+|||++......    ......++..|++||.+.+..++
T Consensus        99 ~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~  171 (279)
T cd06619          99 RIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS----IAKTYVGTNAYMAPERISGEQYG  171 (279)
T ss_pred             HHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc----cccCCCCChhhcCceeecCCCCC
Confidence            47899999999999998   999999999999999999999999998653221    12234578899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++|+|++|..||............         ......+.+..............+.+++.+||+.+|+
T Consensus       172 ~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  242 (279)
T cd06619         172 IHSDVWSLGISFMELALGRFPYPQIQKNQGSLMP---------LQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPK  242 (279)
T ss_pred             CcchHHHHHHHHHHHHhCCCCchhhcccccccch---------HHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChh
Confidence            9999999999999999999999642221111000         0111111111111111223456789999999999999


Q ss_pred             CCCCHHHHHHH
Q 028134          162 FRPLINDIVVA  172 (213)
Q Consensus       162 ~Rps~~ev~~~  172 (213)
                      +||+++++++.
T Consensus       243 ~Rp~~~eil~~  253 (279)
T cd06619         243 ERPAPENLMDH  253 (279)
T ss_pred             hCCCHHHHhcC
Confidence            99999999863


No 186
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.94  E-value=1.3e-26  Score=178.64  Aligned_cols=151  Identities=30%  Similarity=0.426  Sum_probs=114.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||++||+.+   ++|+||+|+||+++.++.++++|||.+............ ...++..|++||...+..++
T Consensus       107 ~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~  182 (258)
T smart00219      107 SFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLKDGKFT  182 (258)
T ss_pred             HHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccccccccc-cCCCcccccChHHhccCCCC
Confidence            57899999999999998   999999999999999999999999998765333111111 12356789999998888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+|++|++++++++ |..||.....                 ......+........+..++..+.+++.+||..+|
T Consensus       183 ~~~Di~slG~i~~~l~~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  245 (258)
T smart00219      183 SKSDVWSFGVLLWEIFTLGESPYPGMSN-----------------EEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDP  245 (258)
T ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCCCH-----------------HHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCCh
Confidence            99999999999999998 7777753111                 11111111111122233467789999999999999


Q ss_pred             CCCCCHHHHHHHH
Q 028134          161 NFRPLINDIVVAL  173 (213)
Q Consensus       161 ~~Rps~~ev~~~L  173 (213)
                      ++|||+.++++.|
T Consensus       246 ~~Rpt~~~ll~~l  258 (258)
T smart00219      246 EDRPTFSELVEIL  258 (258)
T ss_pred             hhCcCHHHHHhhC
Confidence            9999999998764


No 187
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.94  E-value=8.9e-27  Score=181.32  Aligned_cols=149  Identities=23%  Similarity=0.308  Sum_probs=110.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc-----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-----   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-----   76 (213)
                      .++.|++.|++|||+++   ++|+||+++||+++.++.++|+|||++.......  .......++..|++||.+.     
T Consensus       115 ~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~  189 (272)
T cd06637         115 YICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENP  189 (272)
T ss_pred             HHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCceeccccc--ccCCcccccccccCHhHhccccCc
Confidence            47889999999999998   9999999999999999999999999986532111  1223345778899999876     


Q ss_pred             cCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhc
Q 028134           77 SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCL  156 (213)
Q Consensus        77 ~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  156 (213)
                      +..++.++|+||+||++|+|++|..||........                ................+...+.+++.+||
T Consensus       190 ~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l  253 (272)
T cd06637         190 DATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA----------------LFLIPRNPAPRLKSKKWSKKFQSFIESCL  253 (272)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH----------------HHHHhcCCCCCCCCCCcCHHHHHHHHHHc
Confidence            33577899999999999999999999853221100                00000000111112234567899999999


Q ss_pred             CcCCCCCCCHHHHHH
Q 028134          157 NEEANFRPLINDIVV  171 (213)
Q Consensus       157 ~~~p~~Rps~~ev~~  171 (213)
                      ..+|.+||++.++++
T Consensus       254 ~~~p~~Rpt~~~il~  268 (272)
T cd06637         254 VKNHSQRPTTEQLMK  268 (272)
T ss_pred             CCChhhCCCHHHHhh
Confidence            999999999999874


No 188
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.94  E-value=8.2e-27  Score=179.98  Aligned_cols=152  Identities=25%  Similarity=0.381  Sum_probs=113.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.|++|||+.+   ++|+||+|+||+++.++.++|+|||.+......... .......+..|++||...+..++
T Consensus       104 ~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~  179 (256)
T cd05112         104 GMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT-SSTGTKFPVKWSSPEVFSFSKYS  179 (256)
T ss_pred             HHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCccc-ccCCCccchhhcCHhHhccCCcC
Confidence            47789999999999998   999999999999999999999999988754222111 11122345679999999888889


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|+++|++++ |..||......                 ...+.+........+......+.+++.+||+.+|
T Consensus       180 ~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p  242 (256)
T cd05112         180 SKSDVWSFGVLMWEVFSEGKTPYENRSNS-----------------EVVETINAGFRLYKPRLASQSVYELMQHCWKERP  242 (256)
T ss_pred             hHHHHHHHHHHHHHHHcCCCCCCCcCCHH-----------------HHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccCh
Confidence            99999999999999998 88888532211                 0011111111111122345679999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 028134          161 NFRPLINDIVVALD  174 (213)
Q Consensus       161 ~~Rps~~ev~~~L~  174 (213)
                      ++||++.++++.|+
T Consensus       243 ~~Rp~~~~~l~~l~  256 (256)
T cd05112         243 EDRPSFSLLLHQLA  256 (256)
T ss_pred             hhCCCHHHHHHhhC
Confidence            99999999998873


No 189
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=1.3e-26  Score=194.86  Aligned_cols=166  Identities=22%  Similarity=0.228  Sum_probs=113.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.||+.||.|||+++   |+||||||+|||++.++.++|+|||++..+..... .......++..|++||.+.+..++
T Consensus       271 ~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~  346 (501)
T PHA03210        271 AIMKQLLCAVEYIHDKK---LIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYC  346 (501)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCC
Confidence            47899999999999998   99999999999999999999999999875432211 112235688999999999988999


Q ss_pred             CccceeeHHHHHHHHHhCCCC-ccccCCCCccchhhchh-------hhhhhhhhhhhhcccccCCC----C-----CHHH
Q 028134           82 LKSDIYSFGVVLLELITGRKA-MDLSKGQGEQNLVSWSR-------PFLKDQKKFVHLVDPLLHGR----Y-----PRRC  144 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p-~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~----~-----~~~~  144 (213)
                      .++|||||||++|||++|..+ +..........+.+...       .+......+...++......    .     ....
T Consensus       347 ~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  426 (501)
T PHA03210        347 EITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGL  426 (501)
T ss_pred             cHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCC
Confidence            999999999999999998754 33222111111111000       00000011111111100000    0     0113


Q ss_pred             HHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          145 LNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       145 ~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ...+.+++.+||+.||.+|||+.|++.
T Consensus       427 ~~~~~~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        427 PADFEYPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             ChHHHHHHHHHhccCcccCcCHHHHhh
Confidence            346788899999999999999999986


No 190
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.94  E-value=2.5e-27  Score=197.81  Aligned_cols=165  Identities=25%  Similarity=0.376  Sum_probs=134.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcc-cccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      -+++.|+.|++||-..+   +|||||.+.|||++.+..+|++|||+++..-+...... ...-.-+..|.|||.+...++
T Consensus       735 gMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKF  811 (996)
T KOG0196|consen  735 GMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKF  811 (996)
T ss_pred             HHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhccc
Confidence            36789999999999998   99999999999999999999999999986533321111 111123568999999999999


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.++|+||+|+++||.|+ |..||+.                +. +..+-..+....+...|.+|+..+.+||+.||+.|
T Consensus       812 TsASDVWSyGIVmWEVmSyGERPYWd----------------mS-NQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkd  874 (996)
T KOG0196|consen  812 TSASDVWSYGIVMWEVMSYGERPYWD----------------MS-NQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKD  874 (996)
T ss_pred             CchhhccccceEEEEecccCCCcccc----------------cc-hHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHH
Confidence            999999999999999875 8899862                12 34444456666666778899999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHhhccCCCccc
Q 028134          160 ANFRPLINDIVVALDYLVSQRDSHPVS  186 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l~~~~~~~~~~  186 (213)
                      ..+||++.+|+..|.+++++-.+-...
T Consensus       875 R~~RP~F~qiV~~lDklIrnP~SLk~~  901 (996)
T KOG0196|consen  875 RNRRPKFAQIVSTLDKLIRNPNSLKTI  901 (996)
T ss_pred             hhcCCCHHHHHHHHHHHhcCchhhccc
Confidence            999999999999999999977764433


No 191
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.94  E-value=3.4e-27  Score=188.91  Aligned_cols=148  Identities=25%  Similarity=0.293  Sum_probs=108.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      .++.||+.||+|||+++   ++||||||+||+++.++.++|+|||++.......  .......++..|+|||.+.+. .+
T Consensus       100 ~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~  174 (330)
T cd05586         100 FYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KTTNTFCGTTEYLAPEVLLDEKGY  174 (330)
T ss_pred             HHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--CCccCccCCccccCHHHHcCCCCC
Confidence            47889999999999998   9999999999999999999999999986422211  112234678899999988754 47


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||+||++|+|++|..||.......                ....+........ .......+.+++.+||+.+|
T Consensus       175 ~~~~DvwslGvil~elltG~~Pf~~~~~~~----------------~~~~i~~~~~~~~-~~~~~~~~~~li~~~L~~~P  237 (330)
T cd05586         175 TKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ----------------MYRNIAFGKVRFP-KNVLSDEGRQFVKGLLNRNP  237 (330)
T ss_pred             CCccceeccccEEEEeccCCCCCCCCCHHH----------------HHHHHHcCCCCCC-CccCCHHHHHHHHHHcCCCH
Confidence            899999999999999999999986321110                0011111101000 11245678899999999999


Q ss_pred             CCCC----CHHHHHH
Q 028134          161 NFRP----LINDIVV  171 (213)
Q Consensus       161 ~~Rp----s~~ev~~  171 (213)
                      .+||    ++.++++
T Consensus       238 ~~R~~~~~~~~~ll~  252 (330)
T cd05586         238 QHRLGAHRDAVELKE  252 (330)
T ss_pred             HHCCCCCCCHHHHhc
Confidence            9998    5666655


No 192
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.94  E-value=1.4e-26  Score=182.71  Aligned_cols=150  Identities=25%  Similarity=0.323  Sum_probs=113.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||.+.+..++
T Consensus       120 ~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  194 (296)
T cd06654         120 AVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYG  194 (296)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccc--cccCcccCCccccCHHHHcCCCCC
Confidence            57889999999999998   9999999999999999999999999876432211  111223567889999998888888


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+|||||++|++++|..||.........  .             ............+......+.+++.+||..+|+
T Consensus       195 ~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~--~-------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~  259 (296)
T cd06654         195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--Y-------------LIATNGTPELQNPEKLSAIFRDFLNRCLDMDVE  259 (296)
T ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCCHHHhH--H-------------HHhcCCCCCCCCccccCHHHHHHHHHHCcCCcc
Confidence            9999999999999999999999633211100  0             000011111112334556789999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.++++
T Consensus       260 ~Rpt~~eil~  269 (296)
T cd06654         260 KRGSAKELLQ  269 (296)
T ss_pred             cCcCHHHHhh
Confidence            9999999986


No 193
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.94  E-value=9.5e-27  Score=171.78  Aligned_cols=146  Identities=23%  Similarity=0.269  Sum_probs=113.4

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC---CCceEEeeeecccccCCCCCCcccccccccccccCccccccCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK   79 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~---~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~   79 (213)
                      .+.||++||.|.|.++   |||||+||.|+++..   ..-+||+|||++....   .......+.|++.|++||+++..+
T Consensus       115 ~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~---~g~~~~G~~GtP~fmaPEvvrkdp  188 (355)
T KOG0033|consen  115 CIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN---DGEAWHGFAGTPGYLSPEVLKKDP  188 (355)
T ss_pred             HHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEeC---CccccccccCCCcccCHHHhhcCC
Confidence            5789999999999999   999999999999943   4568999999998654   223334467999999999999999


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccc---cCCCCCHHHHHHHHHHHHhhc
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL---LHGRYPRRCLNYAVAVTAMCL  156 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl  156 (213)
                      ++...|||+.|+++|-++.|..||....                 +..+.+.+...   ..+..-....++..+++++||
T Consensus       189 y~kpvDiW~cGViLfiLL~G~~PF~~~~-----------------~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML  251 (355)
T KOG0033|consen  189 YSKPVDIWACGVILYILLVGYPPFWDED-----------------QHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRML  251 (355)
T ss_pred             CCCcchhhhhhHHHHHHHhCCCCCCCcc-----------------HHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHh
Confidence            9999999999999999999999997321                 11111111111   111111345678899999999


Q ss_pred             CcCCCCCCCHHHHHH
Q 028134          157 NEEANFRPLINDIVV  171 (213)
Q Consensus       157 ~~~p~~Rps~~ev~~  171 (213)
                      ..||.+|-|+.|.++
T Consensus       252 ~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  252 TVNPKKRITADEALK  266 (355)
T ss_pred             ccChhhhccHHHHhC
Confidence            999999999998764


No 194
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.94  E-value=2.6e-27  Score=183.84  Aligned_cols=162  Identities=19%  Similarity=0.198  Sum_probs=117.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC--------------------CCceEEeeeecccccCCCCCCcccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN--------------------DFNPKLSDFGLAKLGPVGDNTHVST   61 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~--------------------~~~~~l~d~~~~~~~~~~~~~~~~~   61 (213)
                      .+++||+++++|||+.+   ++|-||||+||++..                    +..++++|||.+...     .....
T Consensus       196 ~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~-----~e~hs  267 (415)
T KOG0671|consen  196 HMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFD-----HEHHS  267 (415)
T ss_pred             HHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCccee-----ccCcc
Confidence            37899999999999998   999999999999931                    235789999998752     12224


Q ss_pred             cccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh--------------hh--
Q 028134           62 RVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK--------------DQ--  125 (213)
Q Consensus        62 ~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------~~--  125 (213)
                      ....|.+|+|||++.+.+++++.||||+|||+.|+.+|...|..+...+...+.+.....++              ..  
T Consensus       268 ~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rl  347 (415)
T KOG0671|consen  268 TIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRL  347 (415)
T ss_pred             eeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccc
Confidence            56789999999999999999999999999999999999999987775543322221111110              00  


Q ss_pred             --------hhhhhhcccccCC----CCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          126 --------KKFVHLVDPLLHG----RYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       126 --------~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                              +....+.+.....    ........++.+|+..||..||.+|+|+.|+++
T Consensus       348 dw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  348 DWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             cCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence                    0001111110000    112355668999999999999999999999986


No 195
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.94  E-value=3.1e-27  Score=205.96  Aligned_cols=150  Identities=29%  Similarity=0.360  Sum_probs=123.5

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC--cccccccccccccCccccccCC-
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT--HVSTRVMGTYGYCAPEYAMSGK-   79 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~-   79 (213)
                      +..|++.|++|||++|   ||||||||.||+++.+|.+|++|||.+..+......  .......||+.|||||++.+.+ 
T Consensus      1339 yt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~ 1415 (1509)
T KOG4645|consen 1339 YTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKG 1415 (1509)
T ss_pred             HHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhccccc
Confidence            4579999999999999   999999999999999999999999999876443111  1223467999999999987643 


Q ss_pred             --CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcC
Q 028134           80 --LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLN  157 (213)
Q Consensus        80 --~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  157 (213)
                        -..+.||||+|||+.||++|+.||..                +.++-+++-.+-....+.+|+....+-.+++..||.
T Consensus      1416 kG~~~A~DiWslGCVVlEM~tGkrPW~~----------------~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~ 1479 (1509)
T KOG4645|consen 1416 KGHGGAADIWSLGCVVLEMATGKRPWAE----------------LDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLE 1479 (1509)
T ss_pred             CCCCcchhhhcccceEEEeecCCCchhh----------------ccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHh
Confidence              35789999999999999999999961                222445555566666777888899999999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 028134          158 EEANFRPLINDIVV  171 (213)
Q Consensus       158 ~~p~~Rps~~ev~~  171 (213)
                      .||.+|+++.++++
T Consensus      1480 ~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1480 QDPKMRWTASQLLE 1493 (1509)
T ss_pred             cCchhhhHHHHHHH
Confidence            99999999887765


No 196
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.94  E-value=3.4e-27  Score=188.61  Aligned_cols=144  Identities=28%  Similarity=0.347  Sum_probs=109.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.||+.||.|||+++   ++|+||||+||+++.++.++|+|||++......  ........++..|++||.+.+..++
T Consensus       100 ~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~  174 (325)
T cd05604         100 FYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--SDTTTTFCGTPEYLAPEVIRKQPYD  174 (325)
T ss_pred             HHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCC--CCCcccccCChhhCCHHHHcCCCCC
Confidence            47899999999999998   999999999999999999999999998642111  1122334678899999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....++....  ..+......+.+++..|++.+|.
T Consensus       175 ~~~DvwslG~il~el~~G~~pf~~~~~~----------------~~~~~~~~~~~--~~~~~~~~~~~~ll~~ll~~~p~  236 (325)
T cd05604         175 NTVDWWCLGAVLYEMLYGLPPFYCRDVA----------------EMYDNILHKPL--VLRPGASLTAWSILEELLEKDRQ  236 (325)
T ss_pred             CcCccccccceehhhhcCCCCCCCCCHH----------------HHHHHHHcCCc--cCCCCCCHHHHHHHHHHhccCHH
Confidence            9999999999999999999999632211                00111111111  11223456788999999999999


Q ss_pred             CCCCHHH
Q 028134          162 FRPLIND  168 (213)
Q Consensus       162 ~Rps~~e  168 (213)
                      +||++.+
T Consensus       237 ~R~~~~~  243 (325)
T cd05604         237 RRLGAKE  243 (325)
T ss_pred             hcCCCCC
Confidence            9998863


No 197
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.94  E-value=7.4e-27  Score=189.45  Aligned_cols=145  Identities=32%  Similarity=0.423  Sum_probs=121.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.+++.||.|||+.+   |+|+|+||.||+++.++.+|+||||+++-..  ..........||+.|+|||...+.+|+
T Consensus       104 ~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~--~~t~vltsikGtPlYmAPElv~e~pyd  178 (808)
T KOG0597|consen  104 AIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMS--TNTSVLTSIKGTPLYMAPELVEEQPYD  178 (808)
T ss_pred             HHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcc--cCceeeeeccCcccccCHHHHcCCCcc
Confidence            47899999999999998   9999999999999999999999999998632  234456677899999999999999999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccC--CCCCHHHHHHHHHHHHhhcCcC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLH--GRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      ..+|+||+|||+||++.|++||-                    ...+.+.+.....  ..+|......+..++...|..|
T Consensus       179 ~~sDlWslGcilYE~~~G~PPF~--------------------a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kd  238 (808)
T KOG0597|consen  179 HTSDLWSLGCILYELYVGQPPFY--------------------ARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLIKD  238 (808)
T ss_pred             chhhHHHHHHHHHHHhcCCCCch--------------------HHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhcC
Confidence            99999999999999999999995                    1122222222111  1235578889999999999999


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      |.+|-+..+++.
T Consensus       239 P~~RltW~~Ll~  250 (808)
T KOG0597|consen  239 PAQRLTWTDLLG  250 (808)
T ss_pred             hhhcccHHHHhc
Confidence            999999999876


No 198
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.94  E-value=1.6e-26  Score=197.71  Aligned_cols=159  Identities=25%  Similarity=0.386  Sum_probs=128.9

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccc-cccccccCccccccCC
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRV-MGTYGYCAPEYAMSGK   79 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~Pe~~~~~~   79 (213)
                      +.+++||+.|++||+++.   ++||||.+.||++..+..+|++|||+++.............. ..+..|+|||.+....
T Consensus       421 lsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~  497 (609)
T KOG0200|consen  421 LSFAYQIANGMEYLASVP---CVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRV  497 (609)
T ss_pred             HHHHHHHHHHHHHHhhCC---ccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCc
Confidence            468999999999999998   999999999999999999999999999854333222211111 1456799999999999


Q ss_pred             CCCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           80 LTLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      ++.++||||||+++|||++ |..||..                ......+.+.+....+...|..|..++.++|+.||+.
T Consensus       498 ft~kSDVWSfGI~L~EifsLG~~PYp~----------------~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~  561 (609)
T KOG0200|consen  498 FTSKSDVWSFGILLWEIFTLGGTPYPG----------------IPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNA  561 (609)
T ss_pred             ccccchhhHHHHHHHHHhhCCCCCCCC----------------CCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCC
Confidence            9999999999999999987 7778853                0101223446666667677889999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHhh
Q 028134          159 EANFRPLINDIVVALDYLVS  178 (213)
Q Consensus       159 ~p~~Rps~~ev~~~L~~l~~  178 (213)
                      +|++||++.++.+.|+....
T Consensus       562 ~p~~RP~F~~~~~~~~~~l~  581 (609)
T KOG0200|consen  562 DPEDRPTFSECVEFFEKHLQ  581 (609)
T ss_pred             CcccCCCHHHHHHHHHHHHH
Confidence            99999999999999998654


No 199
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.94  E-value=2.2e-26  Score=186.97  Aligned_cols=151  Identities=23%  Similarity=0.276  Sum_probs=112.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC---
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG---   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~---   78 (213)
                      .++.|++.||+|||+++   ++||||||+||+++.++.++|+|||++....... ........++..|+|||.+.+.   
T Consensus       146 ~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~  221 (370)
T cd05596         146 FYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG-MVRCDTAVGTPDYISPEVLKSQGGD  221 (370)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeeccCCC-cccCCCCCCCcCeECHHHhccCCCC
Confidence            36789999999999998   9999999999999999999999999987532211 1112235688999999988653   


Q ss_pred             -CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCH--HHHHHHHHHHHhh
Q 028134           79 -KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPR--RCLNYAVAVTAMC  155 (213)
Q Consensus        79 -~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~c  155 (213)
                       .++.++|+|||||++|+|++|..||......                .....+.+......++.  .....+.+++..|
T Consensus       222 ~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~----------------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  285 (370)
T cd05596         222 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----------------GTYSKIMDHKNSLTFPDDIEISKQAKDLICAF  285 (370)
T ss_pred             CCCCCceeeeehhHHHHHHHhCCCCcCCCCHH----------------HHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHH
Confidence             3678999999999999999999999633211                11112222111111222  3567889999999


Q ss_pred             cCcCCCC--CCCHHHHHHH
Q 028134          156 LNEEANF--RPLINDIVVA  172 (213)
Q Consensus       156 l~~~p~~--Rps~~ev~~~  172 (213)
                      |..+|.+  |+++.++++.
T Consensus       286 L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         286 LTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             ccChhhccCCCCHHHHhcC
Confidence            9999998  9999999763


No 200
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.94  E-value=8.2e-27  Score=191.04  Aligned_cols=156  Identities=24%  Similarity=0.311  Sum_probs=128.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .+++||+.|++|||++.   +|||||...||++.....+||+|||+++...+... ........+..|++||.+....++
T Consensus       495 ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~y-YkaS~~kLPIKWmaPESINfRrFT  570 (974)
T KOG4257|consen  495 LYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAY-YKASRGKLPIKWMAPESINFRRFT  570 (974)
T ss_pred             HHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhccccch-hhccccccceeecCccccchhccc
Confidence            46899999999999998   99999999999999999999999999987643322 222334457789999999999999


Q ss_pred             CccceeeHHHHHHHHH-hCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELI-TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|||.||+.+||++ .|..||.+-...+..                 -.+...-+.+.|..|++.+..++.+||..+|
T Consensus       571 tASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI-----------------~~iEnGeRlP~P~nCPp~LYslmskcWayeP  633 (974)
T KOG4257|consen  571 TASDVWMFGVCMWEILSLGVKPFQGVKNSDVI-----------------GHIENGERLPCPPNCPPALYSLMSKCWAYEP  633 (974)
T ss_pred             chhhHHHHHHHHHHHHHhcCCccccccccceE-----------------EEecCCCCCCCCCCCChHHHHHHHHHhccCc
Confidence            9999999999999985 588899744433321                 1234444566788999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhh
Q 028134          161 NFRPLINDIVVALDYLVS  178 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~  178 (213)
                      .+||.+.++...|..+..
T Consensus       634 ~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  634 SKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             ccCCcHHHHHHHHHHHHH
Confidence            999999999998877766


No 201
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.93  E-value=1.7e-26  Score=185.11  Aligned_cols=163  Identities=24%  Similarity=0.360  Sum_probs=112.2

Q ss_pred             hhHHHHHHHHHHhhcC-CCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCK-ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~-~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.||.|||+. +   ++|+||||+||+++.++.++|+|||++......    ......++..|+|||.+.+..+
T Consensus       107 ~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~  179 (333)
T cd06650         107 KVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHY  179 (333)
T ss_pred             HHHHHHHHHHHHHHhcCC---EEecCCChhhEEEcCCCCEEEeeCCcchhhhhh----ccccCCCCccccCHHHhcCCCC
Confidence            5788999999999974 5   999999999999999999999999998653221    1122457889999999988888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhh------c------------hh------hhhhhhhhhhhhcc---
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS------W------------SR------PFLKDQKKFVHLVD---  133 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~------~------------~~------~~~~~~~~~~~~~~---  133 (213)
                      +.++|+||+||++|++++|..||.............      .            ..      +............+   
T Consensus       180 ~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (333)
T cd06650         180 SVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIV  259 (333)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHh
Confidence            999999999999999999999986432211000000      0            00      00000000000011   


Q ss_pred             cccCCCC-CHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          134 PLLHGRY-PRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       134 ~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ....... ......++.+++.+||+.||++||++.|+++
T Consensus       260 ~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~  298 (333)
T cd06650         260 NEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV  298 (333)
T ss_pred             cCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence            0011111 1124567899999999999999999999975


No 202
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.93  E-value=9.7e-27  Score=189.22  Aligned_cols=166  Identities=23%  Similarity=0.307  Sum_probs=113.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      .++.||+.||.|||+++   ++|+||||+||+++.++.++|+|||++........ .......++..|++||.+.+. .+
T Consensus       107 ~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~  182 (372)
T cd07853         107 VFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES-KHMTQEVVTQYYRAPEILMGSRHY  182 (372)
T ss_pred             HHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecccCcc-ccCCCCCcCCCcCCHHHHcCCCCC
Confidence            47899999999999998   99999999999999999999999999875322111 112223467889999988764 46


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhh------hhhh-hhhhhhhcccccCC-------CCCHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRP------FLKD-QKKFVHLVDPLLHG-------RYPRRCLN  146 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~-------~~~~~~~~  146 (213)
                      +.++|+||+||++|+|++|..||...........+.....      .... ......+.......       ........
T Consensus       183 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (372)
T cd07853         183 TSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATH  262 (372)
T ss_pred             CcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCH
Confidence            8899999999999999999999975432211111100000      0000 00000011100000       11223456


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ++.+++.+||+.||++|||+.|++.
T Consensus       263 ~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         263 EAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             HHHHHHHHhCCCChhhCcCHHHHhc
Confidence            7899999999999999999999986


No 203
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.93  E-value=2.5e-26  Score=179.80  Aligned_cols=98  Identities=34%  Similarity=0.534  Sum_probs=86.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCC------CceEEeeeecccccCCCCCCcccccccccccccCcccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND------FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA   75 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~------~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   75 (213)
                      .++.||+.|+++||+++   ||||||||+|||++..      ..+||+|||+++...   .........|++.|||||++
T Consensus       113 ~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~---~~~~a~tlcGSplYMAPEV~  186 (429)
T KOG0595|consen  113 HFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ---PGSMAETLCGSPLYMAPEVI  186 (429)
T ss_pred             HHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhhhCC---chhHHHHhhCCccccCHHHH
Confidence            36899999999999999   9999999999999654      568999999998754   23334567899999999999


Q ss_pred             ccCCCCCccceeeHHHHHHHHHhCCCCccc
Q 028134           76 MSGKLTLKSDIYSFGVVLLELITGRKAMDL  105 (213)
Q Consensus        76 ~~~~~~~~~Di~slG~~~~~l~~g~~p~~~  105 (213)
                      ...+|+.++|+||+|+|+|++++|+.||+.
T Consensus       187 ~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a  216 (429)
T KOG0595|consen  187 MSQQYDAKADLWSIGTILYQCLTGKPPFDA  216 (429)
T ss_pred             HhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence            999999999999999999999999999973


No 204
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93  E-value=6.4e-27  Score=190.62  Aligned_cols=161  Identities=28%  Similarity=0.417  Sum_probs=129.2

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      ++++++.+.||+|||+++   ++||||.+.|||+..++.+|++|||+++...  ...........+..|+|||.+...-+
T Consensus       265 ~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~~~~--~~~~~~~~~klPirWLAPEtl~~~~~  339 (474)
T KOG0194|consen  265 LRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSRAGS--QYVMKKFLKKLPIRWLAPETLNTGIF  339 (474)
T ss_pred             HHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccccCCc--ceeeccccccCcceecChhhhccCcc
Confidence            368899999999999998   9999999999999999999999999987532  11111112345678999999998899


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.++||||||+++||+++ |..||.+...                ......++....+-..+...+..+..++..||..+
T Consensus       340 s~kTDV~sfGV~~~Eif~~g~~Py~g~~~----------------~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~  403 (474)
T KOG0194|consen  340 SFKTDVWSFGVLLWEIFENGAEPYPGMKN----------------YEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKD  403 (474)
T ss_pred             ccccchhheeeeEEeeeccCCCCCCCCCH----------------HHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCC
Confidence            999999999999999988 7778862221                12222232445555667788889999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHhhccCC
Q 028134          160 ANFRPLINDIVVALDYLVSQRDS  182 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l~~~~~~  182 (213)
                      |++||+|.++.+.|+.+......
T Consensus       404 p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  404 PEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             hhhccCHHHHHHHHHHHHhcccc
Confidence            99999999999999999987664


No 205
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.93  E-value=2.2e-26  Score=180.67  Aligned_cols=150  Identities=29%  Similarity=0.443  Sum_probs=114.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++.......   ......++..|++||.+.+..++
T Consensus       106 ~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~  179 (285)
T cd05605         106 FYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE---TIRGRVGTVGYMAPEVVKNERYT  179 (285)
T ss_pred             HHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC---ccccccCCCCccCcHHhcCCCCC
Confidence            46899999999999998   9999999999999999999999999987542211   11234578899999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++|++++|..||........             ...+...+.. ....++......+.+++..||..||+
T Consensus       180 ~~~Diws~G~~l~el~~g~~pf~~~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~  245 (285)
T cd05605         180 FSPDWWGLGCLIYEMIEGKSPFRQRKEKVK-------------REEVERRVKE-DQEEYSEKFSEAARSICRQLLTKDPG  245 (285)
T ss_pred             ccccchhHHHHHHHHHHCCCCCCCCchhhH-------------HHHHHHHhhh-cccccCcccCHHHHHHHHHHccCCHH
Confidence            999999999999999999999974322110             0111111111 11223445667889999999999999


Q ss_pred             CCC-----CHHHHHH
Q 028134          162 FRP-----LINDIVV  171 (213)
Q Consensus       162 ~Rp-----s~~ev~~  171 (213)
                      +||     +++++++
T Consensus       246 ~R~~~~~~~~~~l~~  260 (285)
T cd05605         246 FRLGCRGEGAEEVKA  260 (285)
T ss_pred             HhcCCCCCCHHHHhc
Confidence            999     8888865


No 206
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.93  E-value=2.9e-26  Score=177.99  Aligned_cols=150  Identities=26%  Similarity=0.403  Sum_probs=114.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC----cccccccccccccCcccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT----HVSTRVMGTYGYCAPEYAMS   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~Pe~~~~   77 (213)
                      +++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||.+.........    .......++..|++||.+.+
T Consensus       110 ~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~  186 (267)
T cd06628         110 NFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQ  186 (267)
T ss_pred             HHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhcc
Confidence            57899999999999998   999999999999999999999999988754321111    11122346778999999988


Q ss_pred             CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcC
Q 028134           78 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLN  157 (213)
Q Consensus        78 ~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  157 (213)
                      ..++.++|+|++|+++|++++|..||......                ........ ......+......+.+++.+||+
T Consensus       187 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----------------~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~  249 (267)
T cd06628         187 TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL----------------QAIFKIGE-NASPEIPSNISSEAIDFLEKTFE  249 (267)
T ss_pred             CCCCchhhhHHHHHHHHHHhhCCCCCCCccHH----------------HHHHHHhc-cCCCcCCcccCHHHHHHHHHHcc
Confidence            88889999999999999999999999632111                11111111 11223344566788999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 028134          158 EEANFRPLINDIVV  171 (213)
Q Consensus       158 ~~p~~Rps~~ev~~  171 (213)
                      .+|++||++.+|++
T Consensus       250 ~~p~~Rp~~~~il~  263 (267)
T cd06628         250 IDHNKRPTAAELLK  263 (267)
T ss_pred             CCchhCcCHHHHhh
Confidence            99999999999875


No 207
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.93  E-value=1.9e-26  Score=184.59  Aligned_cols=149  Identities=21%  Similarity=0.249  Sum_probs=110.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc-----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-----   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-----   76 (213)
                      .++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++......... ......++..|+|||.+.     
T Consensus       106 ~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~  181 (330)
T cd05601         106 FYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGD  181 (330)
T ss_pred             HHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCCce-eeecccCCccccCHHHhcccccc
Confidence            46789999999999998   999999999999999999999999998754322211 122345788999999876     


Q ss_pred             -cCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccc--cCCCCCHHHHHHHHHHHH
Q 028134           77 -SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL--LHGRYPRRCLNYAVAVTA  153 (213)
Q Consensus        77 -~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~  153 (213)
                       ...++.++|+||+||++|+|++|..||.......                ....+....  ............+.+++.
T Consensus       182 ~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~----------------~~~~i~~~~~~~~~~~~~~~~~~~~~li~  245 (330)
T cd05601         182 GKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK----------------TYNNIMNFQRFLKFPEDPKVSSDFLDLIQ  245 (330)
T ss_pred             ccCCCCCcceeecccceeeeeccCCCCCCCCCHHH----------------HHHHHHcCCCccCCCCCCCCCHHHHHHHH
Confidence             3456789999999999999999999996322111                111111111  111111235667889999


Q ss_pred             hhcCcCCCCCCCHHHHHH
Q 028134          154 MCLNEEANFRPLINDIVV  171 (213)
Q Consensus       154 ~cl~~~p~~Rps~~ev~~  171 (213)
                      .||. +|.+||++.++++
T Consensus       246 ~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         246 SLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             HHcc-ChhhCCCHHHHhC
Confidence            9998 9999999999985


No 208
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.93  E-value=3.4e-26  Score=179.17  Aligned_cols=149  Identities=23%  Similarity=0.323  Sum_probs=110.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc-----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-----   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-----   76 (213)
                      .++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++.......  .......++..|++||.+.     
T Consensus       107 ~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  181 (282)
T cd06643         107 VVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QRRDSFIGTPYWMAPEVVMCETSK  181 (282)
T ss_pred             HHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc--cccccccccccccCHhhccccCCC
Confidence            47889999999999998   9999999999999999999999999986532211  1122345788999999874     


Q ss_pred             cCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccc-cCCCCCHHHHHHHHHHHHhh
Q 028134           77 SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL-LHGRYPRRCLNYAVAVTAMC  155 (213)
Q Consensus        77 ~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c  155 (213)
                      +..++.++|+||+||++|+|++|..||......                .......... .....+..+...+.+++..|
T Consensus       182 ~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  245 (282)
T cd06643         182 DRPYDYKADVWSLGITLIEMAQIEPPHHELNPM----------------RVLLKIAKSEPPTLAQPSRWSSEFKDFLKKC  245 (282)
T ss_pred             CCCCCccchhhhHHHHHHHHccCCCCccccCHH----------------HHHHHHhhcCCCCCCCccccCHHHHHHHHHH
Confidence            345678999999999999999999998532111                0001111000 01112334567899999999


Q ss_pred             cCcCCCCCCCHHHHHH
Q 028134          156 LNEEANFRPLINDIVV  171 (213)
Q Consensus       156 l~~~p~~Rps~~ev~~  171 (213)
                      |+.+|.+||++.++++
T Consensus       246 l~~~p~~Rp~~~~il~  261 (282)
T cd06643         246 LEKNVDARWTTTQLLQ  261 (282)
T ss_pred             ccCChhhCcCHHHHhc
Confidence            9999999999999874


No 209
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.93  E-value=1.2e-26  Score=186.60  Aligned_cols=144  Identities=24%  Similarity=0.331  Sum_probs=112.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++||||||+||+++.++.++|+|||++.....     ......++..|+|||.+.+..++
T Consensus       135 ~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~  206 (340)
T PTZ00426        135 FYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT-----RTYTLCGTPEYIAPEILLNVGHG  206 (340)
T ss_pred             HHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCC-----CcceecCChhhcCHHHHhCCCCC
Confidence            47899999999999998   99999999999999999999999999875321     12234678899999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....+....  ..++......+.+++..||+.+|.
T Consensus       207 ~~~DiwSlGvil~ell~G~~Pf~~~~~~----------------~~~~~i~~~~--~~~p~~~~~~~~~li~~~l~~dp~  268 (340)
T PTZ00426        207 KAADWWTLGIFIYEILVGCPPFYANEPL----------------LIYQKILEGI--IYFPKFLDNNCKHLMKKLLSHDLT  268 (340)
T ss_pred             ccccccchhhHHHHHhcCCCCCCCCCHH----------------HHHHHHhcCC--CCCCCCCCHHHHHHHHHHcccCHH
Confidence            9999999999999999999999632211                0011111111  112334456788999999999999


Q ss_pred             CCC-----CHHHHHH
Q 028134          162 FRP-----LINDIVV  171 (213)
Q Consensus       162 ~Rp-----s~~ev~~  171 (213)
                      +|+     +++++++
T Consensus       269 ~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        269 KRYGNLKKGAQNVKE  283 (340)
T ss_pred             HcCCCCCCCHHHHHc
Confidence            995     8888876


No 210
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.93  E-value=3.6e-26  Score=177.56  Aligned_cols=150  Identities=25%  Similarity=0.334  Sum_probs=111.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC-cccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT-HVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      .++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||++......... .......++..|++||.+.+..+
T Consensus       110 ~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  186 (266)
T cd06651         110 KYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGY  186 (266)
T ss_pred             HHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCC
Confidence            47899999999999998   999999999999999999999999998643221111 11122346778999999988888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||+||++|++++|..||.....                ................+......+.+++ .||..+|
T Consensus       187 ~~~~Dv~slG~i~~el~~g~~pf~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p  249 (266)
T cd06651         187 GRKADVWSLGCTVVEMLTEKPPWAEYEA----------------MAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEA  249 (266)
T ss_pred             CchhhhHHHHHHHHHHHHCCCCccccch----------------HHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCCh
Confidence            9999999999999999999999862211                0111111111122333445556677777 6888999


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      ++||+++||+.
T Consensus       250 ~~Rp~~~eil~  260 (266)
T cd06651         250 RHRPSAEELLR  260 (266)
T ss_pred             hhCcCHHHHhc
Confidence            99999999974


No 211
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.93  E-value=3.5e-26  Score=176.83  Aligned_cols=148  Identities=29%  Similarity=0.339  Sum_probs=116.1

Q ss_pred             hhHHHHHHHHHHhh-----cCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc
Q 028134            2 KIAVGAARGLEYLH-----CKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH-----~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   76 (213)
                      .++.|++.||.|||     +.+   ++|+||+|+||+++.++.++++|||++........  ......++..|++||.+.
T Consensus       109 ~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~pE~~~  183 (265)
T cd08217         109 RILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS--FAKTYVGTPYYMSPEQLN  183 (265)
T ss_pred             HHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEecccccccccCCcc--cccccccCCCccChhhhc
Confidence            57899999999999     777   99999999999999999999999999876432221  122345788899999998


Q ss_pred             cCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhc
Q 028134           77 SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCL  156 (213)
Q Consensus        77 ~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  156 (213)
                      +..++.++|+|+||++++++++|..||.....                 ....+.+........+......+.+++.+||
T Consensus       184 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l  246 (265)
T cd08217         184 HMSYDEKSDIWSLGCLIYELCALSPPFTARNQ-----------------LQLASKIKEGKFRRIPYRYSSELNEVIKSML  246 (265)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHCCCcccCcCH-----------------HHHHHHHhcCCCCCCccccCHHHHHHHHHHc
Confidence            88888999999999999999999999874321                 1111112222222344566778999999999


Q ss_pred             CcCCCCCCCHHHHHH
Q 028134          157 NEEANFRPLINDIVV  171 (213)
Q Consensus       157 ~~~p~~Rps~~ev~~  171 (213)
                      ..+|++||++.+|++
T Consensus       247 ~~~p~~Rp~~~~il~  261 (265)
T cd08217         247 NVDPDKRPSTEELLQ  261 (265)
T ss_pred             cCCcccCCCHHHHhh
Confidence            999999999999986


No 212
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.93  E-value=2.4e-26  Score=180.52  Aligned_cols=150  Identities=30%  Similarity=0.450  Sum_probs=114.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++.......   ......++..|+|||.+.+..++
T Consensus       106 ~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~  179 (285)
T cd05630         106 FYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYT  179 (285)
T ss_pred             HHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc---cccCCCCCccccChHHHcCCCCC
Confidence            47889999999999998   9999999999999999999999999986532211   11234578899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++|+|++|..||.........             ......++. .....+..+...+.+++..||+.||+
T Consensus       180 ~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-------------~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~  245 (285)
T cd05630         180 FSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-------------EEVERLVKE-VQEEYSEKFSPDARSLCKMLLCKDPK  245 (285)
T ss_pred             CccccHHHHHHHHHHHhCCCCCCCCCccchH-------------HHHHhhhhh-hhhhcCccCCHHHHHHHHHHhhcCHH
Confidence            9999999999999999999999643221110             011111111 01122334566789999999999999


Q ss_pred             CCCC-----HHHHHH
Q 028134          162 FRPL-----INDIVV  171 (213)
Q Consensus       162 ~Rps-----~~ev~~  171 (213)
                      +||+     ++|+++
T Consensus       246 ~R~s~~~~~~~~~~~  260 (285)
T cd05630         246 ERLGCQGGGAREVKE  260 (285)
T ss_pred             HccCCCCCchHHHHc
Confidence            9999     888886


No 213
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93  E-value=3.2e-26  Score=184.31  Aligned_cols=146  Identities=24%  Similarity=0.359  Sum_probs=121.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceee-CCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILL-DNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~-~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.||+.||.|+|+..   +|||||||+|++| ..-|-+||.|||++..+..+.   ......|...|.|||++.+..|
T Consensus       122 kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~---kL~TsCGSLAYSAPEILLGDsY  195 (864)
T KOG4717|consen  122 KYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK---KLTTSCGSLAYSAPEILLGDSY  195 (864)
T ss_pred             HHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCcc---hhhcccchhhccCchhhhcCcc
Confidence            57899999999999988   9999999999876 667899999999998654433   2345678899999999999988


Q ss_pred             C-CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 T-LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~-~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      + ++.||||||+|+|++++|+.||+....                .+.+..++|...  ..|.....+..++|..||..|
T Consensus       196 DAPAVDiWSLGVILyMLVCGq~PFqeAND----------------SETLTmImDCKY--tvPshvS~eCrdLI~sMLvRd  257 (864)
T KOG4717|consen  196 DAPAVDIWSLGVILYMLVCGQPPFQEAND----------------SETLTMIMDCKY--TVPSHVSKECRDLIQSMLVRD  257 (864)
T ss_pred             CCcchhhhHHHHHHHHHHhCCCccccccc----------------hhhhhhhhcccc--cCchhhhHHHHHHHHHHHhcC
Confidence            6 789999999999999999999973332                344555566533  457788899999999999999


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      |.+|.+.+||..
T Consensus       258 PkkRAslEeI~s  269 (864)
T KOG4717|consen  258 PKKRASLEEIVS  269 (864)
T ss_pred             chhhccHHHHhc
Confidence            999999999974


No 214
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.93  E-value=2.9e-26  Score=178.72  Aligned_cols=148  Identities=27%  Similarity=0.351  Sum_probs=113.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|+.|||+.+   ++|+||+|+||+++.++.++++|||++.......  .......++..|++||.+.+..++
T Consensus       102 ~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~  176 (274)
T cd06609         102 FILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYD  176 (274)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc--cccccccCCccccChhhhccCCCC
Confidence            57899999999999998   9999999999999999999999999987643221  122234567789999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHH-HHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRR-CLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|+++|++++|..||.......                 ....+........+.. +...+.+++..||..+|
T Consensus       177 ~~sDv~slG~il~~l~tg~~p~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p  239 (274)
T cd06609         177 EKADIWSLGITAIELAKGEPPLSDLHPMR-----------------VLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDP  239 (274)
T ss_pred             chhhHHHHHHHHHHHHhCCCCcccCchHH-----------------HHHHhhhcCCCCCcccccCHHHHHHHHHHhhCCh
Confidence            99999999999999999999996332110                 0001111111111222 56678999999999999


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      ++||+++++++
T Consensus       240 ~~Rpt~~~il~  250 (274)
T cd06609         240 KERPSAKELLK  250 (274)
T ss_pred             hhCcCHHHHhh
Confidence            99999999976


No 215
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.93  E-value=2.8e-26  Score=179.53  Aligned_cols=149  Identities=23%  Similarity=0.297  Sum_probs=110.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc-----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-----   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-----   76 (213)
                      .++.|++.|++|||+.+   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||.+.     
T Consensus       125 ~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~  199 (282)
T cd06636         125 YICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENP  199 (282)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCc
Confidence            46789999999999998   9999999999999999999999999876432111  1122345778899999875     


Q ss_pred             cCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhc
Q 028134           77 SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCL  156 (213)
Q Consensus        77 ~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  156 (213)
                      ...++.++|+||||+++|+|++|..||........                ...+............++..+.++|.+||
T Consensus       200 ~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~li~~cl  263 (282)
T cd06636         200 DATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA----------------LFLIPRNPPPKLKSKKWSKKFIDFIEGCL  263 (282)
T ss_pred             CcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh----------------hhhHhhCCCCCCcccccCHHHHHHHHHHh
Confidence            34577899999999999999999999853221110                00011111111112245678999999999


Q ss_pred             CcCCCCCCCHHHHHH
Q 028134          157 NEEANFRPLINDIVV  171 (213)
Q Consensus       157 ~~~p~~Rps~~ev~~  171 (213)
                      +.+|.+||++.|+++
T Consensus       264 ~~~p~~Rp~~~ell~  278 (282)
T cd06636         264 VKNYLSRPSTEQLLK  278 (282)
T ss_pred             CCChhhCcCHHHHhc
Confidence            999999999999874


No 216
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.93  E-value=5.8e-26  Score=176.23  Aligned_cols=144  Identities=24%  Similarity=0.306  Sum_probs=105.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCc-------eEEeeeecccccCCCCCCcccccccccccccCccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN-------PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY   74 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~-------~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   74 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.       ++++|||++.....      .....++..|++||.
T Consensus       109 ~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~  179 (262)
T cd05077         109 KVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS------RQECVERIPWIAPEC  179 (262)
T ss_pred             HHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC------cccccccccccChhh
Confidence            57899999999999998   999999999999976553       89999998764321      112345678999998


Q ss_pred             cc-cCCCCCccceeeHHHHHHHHH-hCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHH
Q 028134           75 AM-SGKLTLKSDIYSFGVVLLELI-TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVT  152 (213)
Q Consensus        75 ~~-~~~~~~~~Di~slG~~~~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  152 (213)
                      +. +..++.++||||||+++|+|+ .|..|+........                 .........  ........+.++|
T Consensus       180 ~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-----------------~~~~~~~~~--~~~~~~~~~~~li  240 (262)
T cd05077         180 VEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-----------------ERFYEGQCM--LVTPSCKELADLM  240 (262)
T ss_pred             hcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-----------------HHHHhcCcc--CCCCChHHHHHHH
Confidence            86 456888999999999999998 57777652211100                 000011010  1112345788999


Q ss_pred             HhhcCcCCCCCCCHHHHHHHH
Q 028134          153 AMCLNEEANFRPLINDIVVAL  173 (213)
Q Consensus       153 ~~cl~~~p~~Rps~~ev~~~L  173 (213)
                      ..||+.||++||++.+|++.|
T Consensus       241 ~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         241 THCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             HHHcCCChhhCcCHHHHHHhc
Confidence            999999999999999998765


No 217
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.93  E-value=1.7e-26  Score=178.31  Aligned_cols=154  Identities=31%  Similarity=0.415  Sum_probs=113.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc-cCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-SGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-~~~~   80 (213)
                      .++.|+++||.+||+++   ++|+||||+||+++.++.++|+|||.+...  ...........++..|.|||... +...
T Consensus       102 ~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~--~~~~~~~~~~~~~~~y~aPE~~~~~~~~  176 (260)
T PF00069_consen  102 KIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKL--SENNENFNPFVGTPEYMAPEVLQQGKKY  176 (260)
T ss_dssp             HHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEES--TSTTSEBSSSSSSGGGSCHHHHTTTSSB
T ss_pred             ccccccccccccccccc---cccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence            57899999999999998   999999999999999999999999998643  11122233456788999999988 7788


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||+|+++++|++|..||.............        ............   ........+.+++..||+.+|
T Consensus       177 ~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p  245 (260)
T PF00069_consen  177 TRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIE--------KILKRPLPSSSQ---QSREKSEELRDLIKKMLSKDP  245 (260)
T ss_dssp             STHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHH--------HHHHTHHHHHTT---SHTTSHHHHHHHHHHHSSSSG
T ss_pred             cccccccccccccccccccccccccccchhhhhhhh--------hccccccccccc---ccchhHHHHHHHHHHHccCCh
Confidence            999999999999999999999997441111110000        000000000000   011123789999999999999


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      ++||++.++++
T Consensus       246 ~~R~~~~~l~~  256 (260)
T PF00069_consen  246 EQRPSAEELLK  256 (260)
T ss_dssp             GGSTTHHHHHT
T ss_pred             hHCcCHHHHhc
Confidence            99999999974


No 218
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.93  E-value=4.7e-26  Score=177.06  Aligned_cols=151  Identities=27%  Similarity=0.374  Sum_probs=115.2

Q ss_pred             hhHHHHHHHHHHhhc-CCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHC-KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~-~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.|+.|||+ .+   ++|+||++.||+++.++.++|+|||.+.......   ......++..|.+||...+..+
T Consensus       117 ~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~  190 (269)
T cd08528         117 NIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPY  190 (269)
T ss_pred             HHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCC
Confidence            578899999999996 66   9999999999999999999999999987543221   2233457788999999988888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||||+++|++++|..||......                .....+.+..............+.+++.+||+.||
T Consensus       191 ~~~~Dv~slG~ll~~l~~g~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p  254 (269)
T cd08528         191 GEKADVWAFGCILYQMCTLQPPFYSTNML----------------SLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDA  254 (269)
T ss_pred             chHHHHHHHHHHHHHHHhCCCcccccCHH----------------HHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCC
Confidence            99999999999999999999998522111                00111111111111122445678999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 028134          161 NFRPLINDIVVALD  174 (213)
Q Consensus       161 ~~Rps~~ev~~~L~  174 (213)
                      ++||++.|+..+++
T Consensus       255 ~~Rp~~~e~~~~~~  268 (269)
T cd08528         255 EARPDIIQVSAMIS  268 (269)
T ss_pred             ccCCCHHHHHHHhc
Confidence            99999999998774


No 219
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.93  E-value=5.5e-26  Score=177.50  Aligned_cols=148  Identities=27%  Similarity=0.389  Sum_probs=114.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|+.|||+++   ++|+||+|+||+++.++.++++|||++.......  .......++..|++||.+.+..++
T Consensus       105 ~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  179 (277)
T cd06642         105 TILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYD  179 (277)
T ss_pred             HHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc--hhhhcccCcccccCHHHhCcCCCc
Confidence            47889999999999998   9999999999999999999999999986532211  111223467789999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||||+++|++++|..|+.......                 ....+...........+...+.+++.+||..+|+
T Consensus       180 ~~~Dv~slG~il~el~tg~~p~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  242 (277)
T cd06642         180 FKADIWSLGITAIELAKGEPPNSDLHPMR-----------------VLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPR  242 (277)
T ss_pred             hhhhHHHHHHHHHHHHhCCCCCcccchhh-----------------HHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcc
Confidence            99999999999999999999986322111                 0001111112223345567789999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.++++
T Consensus       243 ~Rp~~~~il~  252 (277)
T cd06642         243 FRPTAKELLK  252 (277)
T ss_pred             cCcCHHHHHH
Confidence            9999999997


No 220
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.93  E-value=3.4e-26  Score=182.71  Aligned_cols=142  Identities=27%  Similarity=0.415  Sum_probs=109.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++.......  .......++..|+|||.+.+..++
T Consensus       105 ~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~  179 (323)
T cd05615         105 FYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG--VTTRTFCGTPDYIAPEIIAYQPYG  179 (323)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCCC--ccccCccCCccccCHHHHcCCCCC
Confidence            57899999999999998   9999999999999999999999999986432111  112234578899999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|+|++|..||......                .....+....  ..++......+.+++.+||+.+|.
T Consensus       180 ~~~DiwslGvil~elltG~~pf~~~~~~----------------~~~~~i~~~~--~~~p~~~~~~~~~li~~~l~~~p~  241 (323)
T cd05615         180 KSVDWWAYGVLLYEMLAGQPPFDGEDED----------------ELFQSIMEHN--VSYPKSLSKEAVSICKGLMTKHPS  241 (323)
T ss_pred             CccchhhhHHHHHHHHhCCCCCCCCCHH----------------HHHHHHHhCC--CCCCccCCHHHHHHHHHHcccCHh
Confidence            9999999999999999999999633211                1111111111  123344566789999999999999


Q ss_pred             CCCCH
Q 028134          162 FRPLI  166 (213)
Q Consensus       162 ~Rps~  166 (213)
                      +|++.
T Consensus       242 ~R~~~  246 (323)
T cd05615         242 KRLGC  246 (323)
T ss_pred             hCCCC
Confidence            99985


No 221
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.93  E-value=2.6e-26  Score=180.21  Aligned_cols=149  Identities=31%  Similarity=0.458  Sum_probs=111.7

Q ss_pred             hhHHHHHHHHHHhhcC-CCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC--
Q 028134            2 KIAVGAARGLEYLHCK-ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG--   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~-~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~--   78 (213)
                      +++.|++.||+|||+. +   ++|+||||+||+++.++.++|+|||++.......   ......++..|++||.+.+.  
T Consensus       111 ~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~  184 (288)
T cd06616         111 KIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI---AKTRDAGCRPYMAPERIDPSAR  184 (288)
T ss_pred             HHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhccCC---ccccccCccCccCHHHhccccc
Confidence            5789999999999974 6   9999999999999999999999999986532211   11223467789999988765  


Q ss_pred             -CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhc---ccccCCCCCHHHHHHHHHHHHh
Q 028134           79 -KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV---DPLLHGRYPRRCLNYAVAVTAM  154 (213)
Q Consensus        79 -~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~  154 (213)
                       .++.++|+||+|+++|++++|..||......     .          ....+..   .+......+..+...+.+++.+
T Consensus       185 ~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  249 (288)
T cd06616         185 DGYDVRSDVWSLGITLYEVATGKFPYPKWNSV-----F----------DQLTQVVKGDPPILSNSEEREFSPSFVNFINL  249 (288)
T ss_pred             cCCcchhhhhHHHHHHHHHHhCCCCchhcchH-----H----------HHHhhhcCCCCCcCCCcCCCccCHHHHHHHHH
Confidence             6789999999999999999999998633200     0          0111111   1111112223466789999999


Q ss_pred             hcCcCCCCCCCHHHHHH
Q 028134          155 CLNEEANFRPLINDIVV  171 (213)
Q Consensus       155 cl~~~p~~Rps~~ev~~  171 (213)
                      ||+.+|++||++++|+.
T Consensus       250 ~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         250 CLIKDESKRPKYKELLE  266 (288)
T ss_pred             HccCChhhCcCHHHHhc
Confidence            99999999999999986


No 222
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.93  E-value=1.4e-26  Score=183.63  Aligned_cols=165  Identities=23%  Similarity=0.320  Sum_probs=112.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.||+|||+++   ++||||||+||+++.++.++|+|||++.......  .......++..|++||.+.+ ..+
T Consensus       108 ~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  182 (309)
T cd07872         108 IFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSSEY  182 (309)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCc--cccccccccccccCCHHHhCCCCC
Confidence            46789999999999998   9999999999999999999999999986532211  11223456788999998765 457


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchh--------hhhhhhhhhhhhcccccCC----CCCHHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR--------PFLKDQKKFVHLVDPLLHG----RYPRRCLNYA  148 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  148 (213)
                      +.++|+||+|+++|+|++|..||................        +...........-.+....    ........++
T Consensus       183 ~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (309)
T cd07872         183 STQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEG  262 (309)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHH
Confidence            889999999999999999999996443221111110000        0000000000000000000    0112345678


Q ss_pred             HHHHHhhcCcCCCCCCCHHHHHH
Q 028134          149 VAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       149 ~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+++.+||+.||.+|||++|+++
T Consensus       263 ~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         263 IELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             HHHHHHhccCChhhCCCHHHHhc
Confidence            89999999999999999999986


No 223
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.93  E-value=5.1e-26  Score=175.36  Aligned_cols=149  Identities=26%  Similarity=0.338  Sum_probs=113.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|+.|||+.+   ++|+||+|.||+++.++.++|+|||++........  ......++..|++||.+.+..++
T Consensus       103 ~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~  177 (256)
T cd06612         103 AILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYN  177 (256)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc--ccccccCCccccCHHHHhcCCCC
Confidence            57899999999999998   99999999999999999999999999875432211  12234467789999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhc-ccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV-DPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|+++|+|++|..||.........                .... ........+......+.+++.+||+.+|
T Consensus       178 ~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P  241 (256)
T cd06612         178 NKADIWSLGITAIEMAEGKPPYSDIHPMRAI----------------FMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDP  241 (256)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCcchhhhh----------------hhhccCCCCCCCchhhcCHHHHHHHHHHHhcCh
Confidence            9999999999999999999998632211110                0000 0000111223455678999999999999


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      ++||++.++++
T Consensus       242 ~~Rps~~~il~  252 (256)
T cd06612         242 EERPSAIQLLQ  252 (256)
T ss_pred             hhCcCHHHHhc
Confidence            99999999975


No 224
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.93  E-value=5.6e-26  Score=188.12  Aligned_cols=152  Identities=24%  Similarity=0.403  Sum_probs=127.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcc-cccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      .++.||+.|+.||.+++   +|||||...|+++.....+||+|||+.+-.+....... .....-...|++||.+...++
T Consensus       216 dya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kF  292 (1039)
T KOG0199|consen  216 DYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKF  292 (1039)
T ss_pred             HHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccc
Confidence            47899999999999998   99999999999999999999999999987655444333 334556779999999999999


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.++|+|+|||.+|||++ |..||-+..                 ..++.+.+|..-+...+..|.+.+.++++.||..+
T Consensus       293 ShaSDvWmyGVTiWEMFtyGEePW~G~~-----------------g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~  355 (1039)
T KOG0199|consen  293 SHASDVWMYGVTIWEMFTYGEEPWVGCR-----------------GIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHN  355 (1039)
T ss_pred             cccchhhhhhhhHHhhhccCCCCCCCCC-----------------HHHHHHhccccccCCCCCCChHHHHHHHHHhccCC
Confidence            999999999999999987 566774221                 45566667766666678899999999999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 028134          160 ANFRPLINDIVVAL  173 (213)
Q Consensus       160 p~~Rps~~ev~~~L  173 (213)
                      |++||++..|.+.+
T Consensus       356 paDRptFsair~~~  369 (1039)
T KOG0199|consen  356 PADRPTFSAIREDL  369 (1039)
T ss_pred             ccccccHHHHHHhH
Confidence            99999999997433


No 225
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.93  E-value=3.5e-26  Score=180.14  Aligned_cols=150  Identities=25%  Similarity=0.350  Sum_probs=113.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|+.|||+++   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||...+..++
T Consensus       122 ~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  196 (292)
T cd06658         122 TVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--PKRKSLVGTPYWMAPEVISRLPYG  196 (292)
T ss_pred             HHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccc--ccCceeecCccccCHHHHccCCCC
Confidence            57899999999999998   9999999999999999999999999986532211  112234577889999998888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++|++++|..||........   .          ......+......  .......+.+++..||..+|.
T Consensus       197 ~~~Dv~slGvil~el~~g~~p~~~~~~~~~---~----------~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~  261 (292)
T cd06658         197 TEVDIWSLGIMVIEMIDGEPPYFNEPPLQA---M----------RRIRDNLPPRVKD--SHKVSSVLRGFLDLMLVREPS  261 (292)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHHHH---H----------HHHHhcCCCcccc--ccccCHHHHHHHHHHccCChh
Confidence            999999999999999999999863221100   0          0011111111111  123455788999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +|||++++++
T Consensus       262 ~Rpt~~~il~  271 (292)
T cd06658         262 QRATAQELLQ  271 (292)
T ss_pred             HCcCHHHHhh
Confidence            9999999986


No 226
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.93  E-value=9.6e-26  Score=176.21  Aligned_cols=149  Identities=26%  Similarity=0.371  Sum_probs=116.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|++|||+.+   ++|+||+|+||+++.++.++++|||++.......  .......++..|.+||.+.+..++
T Consensus       105 ~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~  179 (277)
T cd06640         105 TMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIQQSAYD  179 (277)
T ss_pred             HHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCc--cccccccCcccccCHhHhccCCCc
Confidence            46889999999999998   9999999999999999999999999986542221  112223467789999998888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||||+++|+|++|..||.......                 ....+........+..++..+.+++..||+.+|+
T Consensus       180 ~~~Dv~slG~il~el~tg~~p~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  242 (277)
T cd06640         180 SKADIWSLGITAIELAKGEPPNSDMHPMR-----------------VLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPS  242 (277)
T ss_pred             cHHHHHHHHHHHHHHHHCCCCCCCcChHh-----------------HhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcc
Confidence            99999999999999999999986322111                 0011111112334556778899999999999999


Q ss_pred             CCCCHHHHHHH
Q 028134          162 FRPLINDIVVA  172 (213)
Q Consensus       162 ~Rps~~ev~~~  172 (213)
                      +||++.++++.
T Consensus       243 ~Rp~~~~il~~  253 (277)
T cd06640         243 FRPTAKELLKH  253 (277)
T ss_pred             cCcCHHHHHhC
Confidence            99999999764


No 227
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.93  E-value=5.3e-26  Score=175.46  Aligned_cols=148  Identities=24%  Similarity=0.322  Sum_probs=114.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.|+.|||+++   ++|+||+|+||+++.++.++++|||.+.......  .......++..|++||...+..++
T Consensus       105 ~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~  179 (256)
T cd08218         105 DWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV--ELARTCIGTPYYLSPEICENRPYN  179 (256)
T ss_pred             HHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcch--hhhhhccCCccccCHHHhCCCCCC
Confidence            57899999999999998   9999999999999999999999999987542211  111223467789999998888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|++++++++|..||......                .....++... ....+......+.++|.+||+.+|+
T Consensus       180 ~~~Dv~slG~i~~~l~~g~~~~~~~~~~----------------~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~  242 (256)
T cd08218         180 NKSDIWALGCVLYEMCTLKHAFEAGNMK----------------NLVLKIIRGS-YPPVSSHYSYDLRNLVSQLFKRNPR  242 (256)
T ss_pred             CccchhHHHHHHHHHHcCCCCccCCCHH----------------HHHHHHhcCC-CCCCcccCCHHHHHHHHHHhhCChh
Confidence            9999999999999999999998522110                1111111111 1123445667899999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.+|++
T Consensus       243 ~Rp~~~~vl~  252 (256)
T cd08218         243 DRPSVNSILE  252 (256)
T ss_pred             hCcCHHHHhh
Confidence            9999999986


No 228
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.93  E-value=4.8e-26  Score=179.72  Aligned_cols=149  Identities=23%  Similarity=0.331  Sum_probs=113.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|++|||+.+   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||.+.+..++
T Consensus       119 ~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  193 (296)
T cd06655         119 AVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYG  193 (296)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhccccc--ccCCCcCCCccccCcchhcCCCCC
Confidence            57889999999999998   9999999999999999999999999876432211  112234567789999998888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhc-ccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV-DPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+|||||++|++++|..||........                ...+. ........+..+...+.++|.+||..+|
T Consensus       194 ~~~Dv~slGvil~~lltg~~pf~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  257 (296)
T cd06655         194 PKVDIWSLGIMAIEMVEGEPPYLNENPLRA----------------LYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDV  257 (296)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHHHH----------------HHHHHhcCCcccCCcccCCHHHHHHHHHHhhcCh
Confidence            999999999999999999999863322110                00000 0000111233456678999999999999


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      ++||++.+|++
T Consensus       258 ~~Rpt~~~il~  268 (296)
T cd06655         258 EKRGSAKELLQ  268 (296)
T ss_pred             hhCCCHHHHhh
Confidence            99999999986


No 229
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.93  E-value=3.9e-26  Score=178.85  Aligned_cols=165  Identities=21%  Similarity=0.231  Sum_probs=111.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      .++.|++.||.|||+++   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||.+.+. .+
T Consensus       105 ~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  179 (285)
T cd07861         105 SYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV--RVYTHEVVTLWYRAPEVLLGSPRY  179 (285)
T ss_pred             HHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc--ccccCCcccccccChHHhcCCCCc
Confidence            47899999999999998   9999999999999999999999999986532211  112223457789999987654 46


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccc-hhhch----hhhhhh---hhhhhhhcccccCC---CCCHHHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQN-LVSWS----RPFLKD---QKKFVHLVDPLLHG---RYPRRCLNYAV  149 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~-~~~~~----~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~  149 (213)
                      +.++|+||+|++++++++|..||.......... .....    ...+..   .......+......   ........++.
T Consensus       180 ~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (285)
T cd07861         180 STPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGL  259 (285)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHH
Confidence            889999999999999999999996432211100 00000    000000   00000011110000   01123456788


Q ss_pred             HHHHhhcCcCCCCCCCHHHHHH
Q 028134          150 AVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       150 ~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ++|.+||+.||.+|||+.+|+.
T Consensus       260 ~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         260 DLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHHHHHhcCChhhCCCHHHHhc
Confidence            9999999999999999999874


No 230
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.93  E-value=4e-26  Score=178.22  Aligned_cols=159  Identities=25%  Similarity=0.326  Sum_probs=133.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|++|||+++   ++|.||.+.|+++++...+||+|-.+++-....+..-.......+..|+++|.+.+..|+
T Consensus       400 ~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~ys  476 (563)
T KOG1024|consen  400 LMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYS  476 (563)
T ss_pred             HHHHHHHHHHHHHHhcC---cccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhc
Confidence            46789999999999999   999999999999999999999998888754333333233344457789999999999999


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++||+++ |+.||.                 .-++.++...+...-+-..|..|++++..+|.-||...|
T Consensus       477 sasDvWsfGVllWELmtlg~~Pya-----------------eIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallp  539 (563)
T KOG1024|consen  477 SASDVWSFGVLLWELMTLGKLPYA-----------------EIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLP  539 (563)
T ss_pred             chhhhHHHHHHHHHHHhcCCCCcc-----------------ccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCc
Confidence            99999999999999987 788885                 222566667777777777788999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhcc
Q 028134          161 NFRPLINDIVVALDYLVSQR  180 (213)
Q Consensus       161 ~~Rps~~ev~~~L~~l~~~~  180 (213)
                      ++||+++++..-|..+..+.
T Consensus       540 eeRPsf~Qlv~cLseF~~ql  559 (563)
T KOG1024|consen  540 EERPSFSQLVICLSEFHTQL  559 (563)
T ss_pred             ccCCCHHHHHHHHHHHHHHH
Confidence            99999999999888776543


No 231
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.93  E-value=4e-26  Score=178.74  Aligned_cols=163  Identities=18%  Similarity=0.202  Sum_probs=110.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      .++.|+++||.|||+++   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||.+.+. .+
T Consensus       103 ~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  177 (284)
T cd07839         103 SFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLY  177 (284)
T ss_pred             HHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC--CCcCCCccccCCcChHHHhCCccc
Confidence            57899999999999998   9999999999999999999999999987532211  112223467789999988764 46


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh--hhh---hhhhhcccccCC---------CCCHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK--DQK---KFVHLVDPLLHG---------RYPRRCLN  146 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~---------~~~~~~~~  146 (213)
                      +.++|+||+||++|+|++|..|+........  ..........  +..   ......+.....         ........
T Consensus       178 ~~~~DiwslG~il~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (284)
T cd07839         178 STSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNS  255 (284)
T ss_pred             CcHHHHHHHHHHHHHHHhcCCCCcCCCCHHH--HHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCH
Confidence            8899999999999999999988643222110  0000000000  000   000000100000         01123456


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+.+++.+||+.||.+|||+++++.
T Consensus       256 ~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         256 TGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             HHHHHHHHHhcCChhhcCCHHHHhc
Confidence            7889999999999999999999875


No 232
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.93  E-value=8.2e-26  Score=174.52  Aligned_cols=144  Identities=25%  Similarity=0.326  Sum_probs=107.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC-------ceEEeeeecccccCCCCCCcccccccccccccCccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF-------NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY   74 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~-------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   74 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++       .++++|||++.....      .....+...|++||.
T Consensus       105 ~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~  175 (259)
T cd05037         105 DVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS------REERVERIPWIAPEC  175 (259)
T ss_pred             HHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCccccccc------ccccccCCCccChhh
Confidence            57889999999999998   99999999999998877       799999999875322      112335567999999


Q ss_pred             cccC--CCCCccceeeHHHHHHHHHhC-CCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHH
Q 028134           75 AMSG--KLTLKSDIYSFGVVLLELITG-RKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAV  151 (213)
Q Consensus        75 ~~~~--~~~~~~Di~slG~~~~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  151 (213)
                      +.+.  .++.++|+||+|+++|++++| ..||..........              .  .....   ..+......+.++
T Consensus       176 ~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~--------------~--~~~~~---~~~~~~~~~~~~l  236 (259)
T cd05037         176 IRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER--------------F--YQDQH---RLPMPDCAELANL  236 (259)
T ss_pred             hcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH--------------H--HhcCC---CCCCCCchHHHHH
Confidence            8766  778999999999999999984 66664322111000              0  00000   0111112678999


Q ss_pred             HHhhcCcCCCCCCCHHHHHHHH
Q 028134          152 TAMCLNEEANFRPLINDIVVAL  173 (213)
Q Consensus       152 i~~cl~~~p~~Rps~~ev~~~L  173 (213)
                      +.+||..+|++||++.+|++.|
T Consensus       237 i~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         237 INQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             HHHHhccChhhCCCHHHHHHhc
Confidence            9999999999999999999876


No 233
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.93  E-value=9.5e-26  Score=177.06  Aligned_cols=150  Identities=29%  Similarity=0.395  Sum_probs=112.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++.......   ......++..|++||.+.+..++
T Consensus       106 ~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~g~~~~~aPE~~~~~~~~  179 (285)
T cd05632         106 FYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE---SIRGRVGTVGYMAPEVLNNQRYT  179 (285)
T ss_pred             HHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC---cccCCCCCcCccChHHhcCCCCC
Confidence            57899999999999998   9999999999999999999999999886532211   11234578899999999888899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++|++++|..||.........             ......+... ...++......+.+++..||+.+|+
T Consensus       180 ~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~  245 (285)
T cd05632         180 LSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR-------------EEVDRRVLET-EEVYSAKFSEEAKSICKMLLTKDPK  245 (285)
T ss_pred             cccchHHHHHHHHHHHhCCCCCCCCCHHHHH-------------HHHHHhhhcc-ccccCccCCHHHHHHHHHHccCCHh
Confidence            9999999999999999999999633211100             0000111000 1122334556788999999999999


Q ss_pred             CCCC-----HHHHHH
Q 028134          162 FRPL-----INDIVV  171 (213)
Q Consensus       162 ~Rps-----~~ev~~  171 (213)
                      +||+     +.+++.
T Consensus       246 ~R~~~~~~~~~~l~~  260 (285)
T cd05632         246 QRLGCQEEGAGEVKR  260 (285)
T ss_pred             HcCCCcccChHHHHc
Confidence            9999     667766


No 234
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=99.93  E-value=6e-26  Score=175.62  Aligned_cols=144  Identities=24%  Similarity=0.362  Sum_probs=106.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCc--------eEEeeeecccccCCCCCCcccccccccccccCcc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN--------PKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE   73 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~--------~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe   73 (213)
                      +++.|++.|++|||+++   ++|+||||+||+++.++.        ++++|||++.....      .....++..|++||
T Consensus       104 ~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~------~~~~~~~~~y~aPE  174 (258)
T cd05078         104 EVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP------KEILLERIPWVPPE  174 (258)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccccccCC------chhccccCCccCch
Confidence            57899999999999998   999999999999977654        58999998764321      12234567899999


Q ss_pred             cccc-CCCCCccceeeHHHHHHHHHhCC-CCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHH
Q 028134           74 YAMS-GKLTLKSDIYSFGVVLLELITGR-KAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAV  151 (213)
Q Consensus        74 ~~~~-~~~~~~~Di~slG~~~~~l~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  151 (213)
                      .+.+ ..++.++|+||+|+++|++++|. .|+.......                 .......  ....+......+.++
T Consensus       175 ~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-----------------~~~~~~~--~~~~~~~~~~~~~~l  235 (258)
T cd05078         175 CIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-----------------KLQFYED--RHQLPAPKWTELANL  235 (258)
T ss_pred             hccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-----------------HHHHHHc--cccCCCCCcHHHHHH
Confidence            8876 35788999999999999999985 4443111110                 0001111  112233344678999


Q ss_pred             HHhhcCcCCCCCCCHHHHHHHH
Q 028134          152 TAMCLNEEANFRPLINDIVVAL  173 (213)
Q Consensus       152 i~~cl~~~p~~Rps~~ev~~~L  173 (213)
                      +..||+.+|++|||++++++.|
T Consensus       236 i~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         236 INQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             HHHHhccChhhCCCHHHHHHhc
Confidence            9999999999999999999876


No 235
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.93  E-value=7.2e-26  Score=176.53  Aligned_cols=153  Identities=23%  Similarity=0.293  Sum_probs=113.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++++|||++....... ........++..|++||.+.+..++
T Consensus       121 ~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~  196 (275)
T cd05046         121 ALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFS  196 (275)
T ss_pred             HHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEcccccccccCccc-ccccCCceeEEeecChhhhccCCCC
Confidence            47899999999999998   9999999999999999999999999876432111 1111223446679999998888888


Q ss_pred             CccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||||+++|++++ |..||......                ...............+..++..+.+++.+||+.+|
T Consensus       197 ~~~Di~slG~~l~~l~~~~~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p  260 (275)
T cd05046         197 TKSDVWSFGVLMWEVFTQGELPFYGLSDE----------------EVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNP  260 (275)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCccccchH----------------HHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            99999999999999998 77787421111                01111111111112233456789999999999999


Q ss_pred             CCCCCHHHHHHHHH
Q 028134          161 NFRPLINDIVVALD  174 (213)
Q Consensus       161 ~~Rps~~ev~~~L~  174 (213)
                      .+||++.++++.|.
T Consensus       261 ~~Rp~~~~~l~~l~  274 (275)
T cd05046         261 KDRPSFSELVSALG  274 (275)
T ss_pred             ccCCCHHHHHHHhc
Confidence            99999999998875


No 236
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.93  E-value=7.9e-26  Score=174.49  Aligned_cols=149  Identities=25%  Similarity=0.363  Sum_probs=114.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.++.|||+.+   ++|+||+|+||+++.++.++++|||++........  ......++..|.+||...+..++
T Consensus       105 ~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~  179 (256)
T cd08221         105 WYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYN  179 (256)
T ss_pred             HHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc--cccccCCCccccCHhhcCCCCCC
Confidence            46789999999999998   99999999999999999999999999875422221  22234578899999998888888


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++|+|++|..||......                .....+..... ...+..+...+.+++..||+.+|+
T Consensus       180 ~~~Dv~slG~i~~~l~~g~~~~~~~~~~----------------~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~  242 (256)
T cd08221         180 FKSDIWALGCVLYELLTLKRTFDATNPL----------------NLVVKIVQGNY-TPVVSVYSSELISLVHSLLQQDPE  242 (256)
T ss_pred             CcchhHHHHHHHHHHHHCCCCCCCCCHH----------------HHHHHHHcCCC-CCCccccCHHHHHHHHHHcccCcc
Confidence            9999999999999999999998632211                11111111111 112244567789999999999999


Q ss_pred             CCCCHHHHHHH
Q 028134          162 FRPLINDIVVA  172 (213)
Q Consensus       162 ~Rps~~ev~~~  172 (213)
                      +||++.++++.
T Consensus       243 ~R~s~~~ll~~  253 (256)
T cd08221         243 KRPTADEVLDQ  253 (256)
T ss_pred             cCCCHHHHhhC
Confidence            99999999864


No 237
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.93  E-value=1.2e-25  Score=182.72  Aligned_cols=151  Identities=23%  Similarity=0.271  Sum_probs=111.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCC--
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK--   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~--   79 (213)
                      .++.||+.||+|||+++   ++||||||+||+++.++.+||+|||++....... ........++..|+|||.+.+..  
T Consensus       146 ~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~  221 (370)
T cd05621         146 FYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG-MVRCDTAVGTPDYISPEVLKSQGGD  221 (370)
T ss_pred             HHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceecccCC-ceecccCCCCcccCCHHHHhccCCC
Confidence            47789999999999998   9999999999999999999999999987542211 11123456889999999887543  


Q ss_pred             --CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCC--HHHHHHHHHHHHhh
Q 028134           80 --LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYP--RRCLNYAVAVTAMC  155 (213)
Q Consensus        80 --~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~c  155 (213)
                        ++.++|+||+||++|+|++|..||......                .....+++......++  ......+.+++..|
T Consensus       222 ~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~----------------~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~  285 (370)
T cd05621         222 GYYGRECDWWSVGVFLFEMLVGDTPFYADSLV----------------GTYSKIMDHKNSLNFPEDVEISKHAKNLICAF  285 (370)
T ss_pred             CCCCcccCEEeehHHHHHHHhCCCCCCCCCHH----------------HHHHHHHhCCcccCCCCcccCCHHHHHHHHHH
Confidence              678999999999999999999999633211                1112222221111122  23466788899999


Q ss_pred             cCcCCCC--CCCHHHHHHH
Q 028134          156 LNEEANF--RPLINDIVVA  172 (213)
Q Consensus       156 l~~~p~~--Rps~~ev~~~  172 (213)
                      +..++.+  |+++.|+++.
T Consensus       286 L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         286 LTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             ccCchhccCCCCHHHHhcC
Confidence            9865544  8999999874


No 238
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.93  E-value=5.2e-26  Score=178.31  Aligned_cols=166  Identities=23%  Similarity=0.348  Sum_probs=114.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      .++.|++.|+.|||..+   ++|+||+++||+++.++.++|+|||++........ .......++..|++||.+.+. .+
T Consensus       104 ~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~  179 (288)
T cd07833         104 SYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPA-SPLTDYVATRWYRAPELLVGDTNY  179 (288)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-ccccCcccccCCcCCchhcCCCCc
Confidence            57889999999999998   99999999999999999999999999876433221 122234567789999998877 78


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhc-hhhh-------hhhhh-----hhhhhcccc-cCCCCCHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSW-SRPF-------LKDQK-----KFVHLVDPL-LHGRYPRRCLN  146 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-~~~~-------~~~~~-----~~~~~~~~~-~~~~~~~~~~~  146 (213)
                      +.++|+||+|+++|++++|..||.............. ....       .....     ......+.. ....++..+..
T Consensus       180 ~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (288)
T cd07833         180 GKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSS  259 (288)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccch
Confidence            8999999999999999999999864322111000000 0000       00000     000000000 00012233467


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+.++|..||..+|++||+++++++
T Consensus       260 ~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         260 PALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHHHHHHHhccCchhcccHHHHhc
Confidence            8999999999999999999999874


No 239
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.93  E-value=9.1e-26  Score=174.90  Aligned_cols=151  Identities=30%  Similarity=0.450  Sum_probs=113.6

Q ss_pred             hhHHHHHHHHHHhhc-CCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHC-KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~-~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.|++|||+ .+   ++|+||+|+||+++.++.++|+|||.+.......    .....++..|++||.+.+..+
T Consensus       104 ~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~~  176 (265)
T cd06605         104 KIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL----AKTFVGTSSYMAPERIQGNDY  176 (265)
T ss_pred             HHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH----hhcccCChhccCHHHHcCCCC
Confidence            578999999999999 87   9999999999999999999999999876432111    111556778999999988889


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHH-HHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRR-CLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~~  159 (213)
                      +.++|+||+|++++++++|..||......... ..          .......... ....+.. ....+.++|..||..+
T Consensus       177 ~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~----------~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~  244 (265)
T cd06605         177 SVKSDIWSLGLSLIELATGRFPYPPENDPPDG-IF----------ELLQYIVNEP-PPRLPSGKFSPDFQDFVNLCLIKD  244 (265)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCcccccccc-HH----------HHHHHHhcCC-CCCCChhhcCHHHHHHHHHHcCCC
Confidence            99999999999999999999998643221110 00          0111111111 1122222 6678999999999999


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      |++||++.+++.
T Consensus       245 p~~Rpt~~~ll~  256 (265)
T cd06605         245 PRERPSYKELLE  256 (265)
T ss_pred             chhCcCHHHHhh
Confidence            999999999975


No 240
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93  E-value=2.1e-25  Score=163.00  Aligned_cols=150  Identities=23%  Similarity=0.219  Sum_probs=108.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+++         ||+||+++.++.+++  ||.+......       ...++..|+|||.+.+..++
T Consensus        21 ~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~-------~~~g~~~y~aPE~~~~~~~~   82 (176)
T smart00750       21 AVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE-------QSRVDPYFMAPEVIQGQSYT   82 (176)
T ss_pred             HHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc-------cCCCcccccChHHhcCCCCc
Confidence            58899999999999875         999999999999998  9987653221       12568899999999999999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHH--HHHHHHHhhcCcC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLN--YAVAVTAMCLNEE  159 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~li~~cl~~~  159 (213)
                      .++||||+||++|||++|..||........  ...   ....   .... ..+... ..+.....  .+.+++.+||..+
T Consensus        83 ~~~DiwSlG~il~elltg~~p~~~~~~~~~--~~~---~~~~---~~~~-~~~~~~-~~~~~~~~~~~~~~~i~~cl~~~  152 (176)
T smart00750       83 EKADIYSLGITLYEALDYELPYNEERELSA--ILE---ILLN---GMPA-DDPRDR-SNLESVSAARSFADFMRVCASRL  152 (176)
T ss_pred             chhhHHHHHHHHHHHHhCCCCccccchhcH--HHH---HHHH---Hhcc-CCcccc-ccHHHHHhhhhHHHHHHHHHhcc
Confidence            999999999999999999999853221110  000   0000   0000 000000 11223333  6899999999999


Q ss_pred             CCCCCCHHHHHHHHHHHhhc
Q 028134          160 ANFRPLINDIVVALDYLVSQ  179 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l~~~  179 (213)
                      |.+||++.++++.+..+..+
T Consensus       153 p~~Rp~~~~ll~~~~~~~~~  172 (176)
T smart00750      153 PQRREAANHYLAHCRALFAE  172 (176)
T ss_pred             cccccCHHHHHHHHHHHHHH
Confidence            99999999999988776543


No 241
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.93  E-value=1.2e-25  Score=174.68  Aligned_cols=150  Identities=24%  Similarity=0.332  Sum_probs=110.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC-CCceEEeeeecccccCCCCCCcccccccccccccCccccccC--
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN-DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG--   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~--   78 (213)
                      .++.|++.||+|||+++   ++|+||+|+||+++. ++.++|+|||.+.......  .......++..|++||.+...  
T Consensus       112 ~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~  186 (268)
T cd06624         112 FYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN--PCTETFTGTLQYMAPEVIDKGPR  186 (268)
T ss_pred             HHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheecccCC--CccccCCCCccccChhhhccccc
Confidence            46789999999999998   999999999999976 6789999999886532211  112223467889999987654  


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      .++.++|+||+|+++|++++|..||........               .............++..+...+.+++.+||+.
T Consensus       187 ~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  251 (268)
T cd06624         187 GYGAPADIWSLGCTIVEMATGKPPFIELGEPQA---------------AMFKVGMFKIHPEIPESLSAEAKNFILRCFEP  251 (268)
T ss_pred             cCCchhhhHHHHHHHHHHHhCCCCCccccChhh---------------hHhhhhhhccCCCCCcccCHHHHHHHHHHcCC
Confidence            367899999999999999999999853211100               00000000112233455667899999999999


Q ss_pred             CCCCCCCHHHHHH
Q 028134          159 EANFRPLINDIVV  171 (213)
Q Consensus       159 ~p~~Rps~~ev~~  171 (213)
                      +|++||++.+++.
T Consensus       252 ~p~~Rpt~~~ll~  264 (268)
T cd06624         252 DPDKRASAHDLLQ  264 (268)
T ss_pred             CchhCCCHHHHHh
Confidence            9999999999875


No 242
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.93  E-value=1.2e-25  Score=175.92  Aligned_cols=148  Identities=30%  Similarity=0.430  Sum_probs=110.3

Q ss_pred             hhHHHHHHHHHHhhcC-CCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc---
Q 028134            2 KIAVGAARGLEYLHCK-ANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS---   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~-~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~---   77 (213)
                      +++.|++.||.|||++ +   ++|+||||+||+++.++.++|+|||++.......   ......++..|++||.+.+   
T Consensus       107 ~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~  180 (283)
T cd06617         107 KIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELN  180 (283)
T ss_pred             HHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccccc---ccccccCCccccChhhcCCccc
Confidence            5789999999999987 7   9999999999999999999999999987542211   1122346778999998764   


Q ss_pred             -CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCC-CHHHHHHHHHHHHhh
Q 028134           78 -GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRY-PRRCLNYAVAVTAMC  155 (213)
Q Consensus        78 -~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~c  155 (213)
                       ..++.++|+|++||++|+|++|..||......               .......+... .... ...++..+.+++..|
T Consensus       181 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---------------~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~  244 (283)
T cd06617         181 QKGYDVKSDVWSLGITMIELATGRFPYDSWKTP---------------FQQLKQVVEEP-SPQLPAEKFSPEFQDFVNKC  244 (283)
T ss_pred             ccccCccccchhhHHHHHHHHhCCCCCCccccC---------------HHHHHHHHhcC-CCCCCccccCHHHHHHHHHH
Confidence             34578999999999999999999998522111               01111111111 1111 123556789999999


Q ss_pred             cCcCCCCCCCHHHHHH
Q 028134          156 LNEEANFRPLINDIVV  171 (213)
Q Consensus       156 l~~~p~~Rps~~ev~~  171 (213)
                      |..+|++||++.++++
T Consensus       245 l~~~p~~Rp~~~~il~  260 (283)
T cd06617         245 LKKNYKERPNYPELLQ  260 (283)
T ss_pred             ccCChhhCcCHHHHhc
Confidence            9999999999999986


No 243
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.93  E-value=7.6e-26  Score=182.28  Aligned_cols=149  Identities=23%  Similarity=0.276  Sum_probs=110.6

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCC---------------------CCCc---
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVG---------------------DNTH---   58 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~---------------------~~~~---   58 (213)
                      ++.+++-||..||+.|   ++||||||+|+||+..|.+||.|||++......                     ....   
T Consensus       246 YiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (550)
T KOG0605|consen  246 YIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFN  322 (550)
T ss_pred             HHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccc
Confidence            4678889999999999   999999999999999999999999998532110                     0000   


Q ss_pred             --c-------------------cccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccc-hhh
Q 028134           59 --V-------------------STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQN-LVS  116 (213)
Q Consensus        59 --~-------------------~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~-~~~  116 (213)
                        .                   .....||+.|+|||++.+.+|...+|.||||||+|||+.|.+||....+..... ++.
T Consensus       323 ~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~n  402 (550)
T KOG0605|consen  323 TPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVN  402 (550)
T ss_pred             cccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence              0                   013478999999999999999999999999999999999999997444333221 111


Q ss_pred             chhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCCCCCC---HHHHH
Q 028134          117 WSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPL---INDIV  170 (213)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps---~~ev~  170 (213)
                      |..               .+..+-...+..+..++|.+|+. ||++|-.   ++||.
T Consensus       403 wr~---------------~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK  443 (550)
T KOG0605|consen  403 WRE---------------TLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIK  443 (550)
T ss_pred             Hhh---------------hccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence            111               11111123445789999999999 9999964   55555


No 244
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.93  E-value=7.3e-26  Score=182.84  Aligned_cols=164  Identities=24%  Similarity=0.305  Sum_probs=114.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.......   ......++..|++||.+.+..++
T Consensus       122 ~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~  195 (353)
T cd07850         122 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYK  195 (353)
T ss_pred             HHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccceeCCCCC---CCCCCcccccccCHHHHhCCCCC
Confidence            46899999999999998   9999999999999999999999999987532211   12223467789999999988899


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchh-h--------ch-------hhhhhhh-----hhhhhhccccc----
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV-S--------WS-------RPFLKDQ-----KKFVHLVDPLL----  136 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~-~--------~~-------~~~~~~~-----~~~~~~~~~~~----  136 (213)
                      .++|+||+||++|+|++|..||...........+ .        +.       ..+....     ......+....    
T Consensus       196 ~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (353)
T cd07850         196 ENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPD  275 (353)
T ss_pred             CchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcc
Confidence            9999999999999999999998643221110000 0        00       0000000     00000000000    


Q ss_pred             CCCCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          137 HGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       137 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ...........+.+++.+||+.||++||++.|+++
T Consensus       276 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         276 SESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             cccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            00011234667899999999999999999999986


No 245
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.93  E-value=1.6e-25  Score=173.55  Aligned_cols=154  Identities=28%  Similarity=0.420  Sum_probs=113.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCc--ccccccccccccCccccccC-
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH--VSTRVMGTYGYCAPEYAMSG-   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~-   78 (213)
                      .++.|++.|++|||+.+   ++|+||+|+||+++.++.++|+|||++..........  ......++..|++||.+... 
T Consensus       106 ~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~  182 (267)
T cd06610         106 TVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVH  182 (267)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHcccc
Confidence            47899999999999998   9999999999999999999999999987654332221  22334577889999988766 


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCC-CCHHHHHHHHHHHHhhcC
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR-YPRRCLNYAVAVTAMCLN  157 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~  157 (213)
                      .++.++|+||+|+++|+|++|..||........  ....          ... ..+..... ........+.+++..||.
T Consensus       183 ~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~~----------~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~  249 (267)
T cd06610         183 GYDFKADIWSFGITAIELATGAAPYSKYPPMKV--LMLT----------LQN-DPPSLETGADYKKYSKSFRKMISLCLQ  249 (267)
T ss_pred             CcCcccchHhHhHHHHHHHhCCCCccccChhhh--HHHH----------hcC-CCCCcCCccccccccHHHHHHHHHHcC
Confidence            678999999999999999999999863322110  0000          000 00011100 012456788999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 028134          158 EEANFRPLINDIVV  171 (213)
Q Consensus       158 ~~p~~Rps~~ev~~  171 (213)
                      .||++||++.++++
T Consensus       250 ~~p~~Rp~~~~ll~  263 (267)
T cd06610         250 KDPSKRPTAEELLK  263 (267)
T ss_pred             CChhhCcCHHHHhh
Confidence            99999999999975


No 246
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.93  E-value=9e-26  Score=177.18  Aligned_cols=150  Identities=23%  Similarity=0.327  Sum_probs=112.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|++|||+++   ++|+||+|+||+++.++.++++|||.+......  ........++..|++||...+..++
T Consensus       119 ~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~  193 (285)
T cd06648         119 TVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE--VPRRKSLVGTPYWMAPEVISRLPYG  193 (285)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccC--CcccccccCCccccCHHHhcCCCCC
Confidence            57899999999999998   999999999999999999999999987643221  1112234577889999998888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++|++++|..||.......   ..          ........+..  ..+..+...+.+++.+||+.+|+
T Consensus       194 ~~~Dv~slGv~l~ell~g~~p~~~~~~~~---~~----------~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~  258 (285)
T cd06648         194 TEVDIWSLGIMVIEMVDGEPPYFNEPPLQ---AM----------KRIRDNLPPKL--KNLHKVSPRLRSFLDRMLVRDPA  258 (285)
T ss_pred             CcccHHHHHHHHHHHHhCCCCCcCCCHHH---HH----------HHHHhcCCCCC--cccccCCHHHHHHHHHHcccChh
Confidence            99999999999999999999985321100   00          00111101111  11223556899999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.++++
T Consensus       259 ~Rpt~~~il~  268 (285)
T cd06648         259 QRATAAELLN  268 (285)
T ss_pred             hCcCHHHHcc
Confidence            9999999984


No 247
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.93  E-value=2e-25  Score=175.69  Aligned_cols=149  Identities=24%  Similarity=0.315  Sum_probs=109.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc-----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-----   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-----   76 (213)
                      .++.|++.++.|||+.+   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||.+.     
T Consensus       114 ~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  188 (292)
T cd06644         114 VICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL--QRRDSFIGTPYWMAPEVVMCETMK  188 (292)
T ss_pred             HHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccccc--cccceecCCccccCceeecccccc
Confidence            57899999999999998   9999999999999999999999999876432211  1122345677899999874     


Q ss_pred             cCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccc-cCCCCCHHHHHHHHHHHHhh
Q 028134           77 SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL-LHGRYPRRCLNYAVAVTAMC  155 (213)
Q Consensus        77 ~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c  155 (213)
                      ...++.++|+|||||++|+|++|..||......                .......... .....+......+.+++.+|
T Consensus       189 ~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  252 (292)
T cd06644         189 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPM----------------RVLLKIAKSEPPTLSQPSKWSMEFRDFLKTA  252 (292)
T ss_pred             CCCCCchhhhHhHHHHHHHHhcCCCCCccccHH----------------HHHHHHhcCCCccCCCCcccCHHHHHHHHHH
Confidence            334678899999999999999999998532211                0001111100 01112334556789999999


Q ss_pred             cCcCCCCCCCHHHHHH
Q 028134          156 LNEEANFRPLINDIVV  171 (213)
Q Consensus       156 l~~~p~~Rps~~ev~~  171 (213)
                      |..+|++||++.++++
T Consensus       253 l~~~p~~Rp~~~~il~  268 (292)
T cd06644         253 LDKHPETRPSAAQLLE  268 (292)
T ss_pred             hcCCcccCcCHHHHhc
Confidence            9999999999999975


No 248
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.93  E-value=1.5e-25  Score=173.31  Aligned_cols=152  Identities=26%  Similarity=0.302  Sum_probs=111.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC---
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG---   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~---   78 (213)
                      .++.|++.|+.|||+++   ++|+||+|+||+++.++.++++|||.+.......  .......++..|++||...+.   
T Consensus       105 ~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~  179 (262)
T cd06613         105 YVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--AKRKSFIGTPYWMAPEVAAVERKG  179 (262)
T ss_pred             HHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh--hccccccCCccccCchhhcccccC
Confidence            47899999999999998   9999999999999999999999999886532211  112234567789999988766   


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      .++.++|+||+|+++|+|++|..||........  ...         ..... ... ............+.+++.+||..
T Consensus       180 ~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~--~~~---------~~~~~-~~~-~~~~~~~~~~~~~~~li~~~l~~  246 (262)
T cd06613         180 GYDGKCDIWALGITAIELAELQPPMFDLHPMRA--LFL---------ISKSN-FPP-PKLKDKEKWSPVFHDFIKKCLTK  246 (262)
T ss_pred             CcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHH---------HHhcc-CCC-ccccchhhhhHHHHHHHHHHcCC
Confidence            788899999999999999999999863221110  000         00000 000 01112234567799999999999


Q ss_pred             CCCCCCCHHHHHH
Q 028134          159 EANFRPLINDIVV  171 (213)
Q Consensus       159 ~p~~Rps~~ev~~  171 (213)
                      +|.+||++.+|+.
T Consensus       247 ~p~~Rpt~~~il~  259 (262)
T cd06613         247 DPKKRPTATKLLQ  259 (262)
T ss_pred             ChhhCCCHHHHhc
Confidence            9999999999874


No 249
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.93  E-value=7.8e-26  Score=178.55  Aligned_cols=149  Identities=24%  Similarity=0.330  Sum_probs=113.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||++.......  .......++..|++||.+.+..++
T Consensus       119 ~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  193 (297)
T cd06656         119 AVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYG  193 (297)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCc--cCcCcccCCccccCHHHHcCCCCC
Confidence            57889999999999998   9999999999999999999999999886532211  112234567789999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhc-ccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV-DPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .++|+||+|+++|++++|..||.........                .... ........+......+.+++.+||..+|
T Consensus       194 ~~~Di~slGvil~~l~tg~~pf~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  257 (297)
T cd06656         194 PKVDIWSLGIMAIEMVEGEPPYLNENPLRAL----------------YLIATNGTPELQNPERLSAVFRDFLNRCLEMDV  257 (297)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCcchhe----------------eeeccCCCCCCCCccccCHHHHHHHHHHccCCh
Confidence            9999999999999999999999643221110                0000 0000111233455678899999999999


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      ++||++++|++
T Consensus       258 ~~Rps~~~il~  268 (297)
T cd06656         258 DRRGSAKELLQ  268 (297)
T ss_pred             hhCcCHHHHhc
Confidence            99999999986


No 250
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.93  E-value=5e-26  Score=185.13  Aligned_cols=164  Identities=26%  Similarity=0.398  Sum_probs=132.0

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      ++|+.||+.|++||.+.+   +||||+.+.|||++.++.+|++|||.++..+.+......+....+..|+|+|.+..+++
T Consensus       640 vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkF  716 (807)
T KOG1094|consen  640 VSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKF  716 (807)
T ss_pred             HHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccc
Confidence            468999999999999998   99999999999999999999999999998777777777777888899999999999999


Q ss_pred             CCccceeeHHHHHHHHH--hCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           81 TLKSDIYSFGVVLLELI--TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~--~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      +.++|+|+||+.+||++  +...||......   .+++....++.+++       .......|..|+..+.++|.+||..
T Consensus       717 ttaSDvWafgvTlwE~~~~C~e~Py~~lt~e---~vven~~~~~~~~~-------~~~~l~~P~~cp~~lyelml~Cw~~  786 (807)
T KOG1094|consen  717 TTASDVWAFGVTLWEVFMLCREQPYSQLTDE---QVVENAGEFFRDQG-------RQVVLSRPPACPQGLYELMLRCWRR  786 (807)
T ss_pred             cchhhhhhhHHHHHHHHHHHhhCchhhhhHH---HHHHhhhhhcCCCC-------cceeccCCCcCcHHHHHHHHHHhch
Confidence            99999999999999985  467788522111   11111111121111       1122234678899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHh
Q 028134          159 EANFRPLINDIVVALDYLV  177 (213)
Q Consensus       159 ~p~~Rps~~ev~~~L~~l~  177 (213)
                      +-.+||++++++..|+...
T Consensus       787 es~~RPsFe~lh~~lq~~~  805 (807)
T KOG1094|consen  787 ESEQRPSFEQLHLFLQEDA  805 (807)
T ss_pred             hhhcCCCHHHHHHHHHHhc
Confidence            9999999999999998764


No 251
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.93  E-value=4.5e-26  Score=180.16  Aligned_cols=162  Identities=22%  Similarity=0.327  Sum_probs=111.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      .++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++.......  .......++..|++||.+.+. .+
T Consensus       108 ~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~  182 (301)
T cd07873         108 LFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT--KTYSNEVVTLWYRPPDILLGSTDY  182 (301)
T ss_pred             HHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--CcccccceeecccCcHHHhCCCCC
Confidence            46789999999999998   9999999999999999999999999986532211  111223457789999987653 46


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh--hhhhhhhhcc---------cccCC----CCCHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK--DQKKFVHLVD---------PLLHG----RYPRRCL  145 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------~~~~~----~~~~~~~  145 (213)
                      +.++|+||+|+++|+|++|..||............   .....  .......++.         +....    .......
T Consensus       183 ~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (301)
T cd07873         183 STQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFI---FRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLD  259 (301)
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCC
Confidence            78999999999999999999999644321110000   00000  0000000000         00000    0112345


Q ss_pred             HHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          146 NYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       146 ~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ..+.+++.+||+.||.+|||++|+++
T Consensus       260 ~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         260 SDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            67889999999999999999999986


No 252
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.93  E-value=1.2e-25  Score=182.22  Aligned_cols=150  Identities=25%  Similarity=0.264  Sum_probs=110.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCc-----------------------
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTH-----------------------   58 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~-----------------------   58 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++..........                       
T Consensus       105 ~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (364)
T cd05599         105 FYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSS  181 (364)
T ss_pred             HHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccc
Confidence            47899999999999998   9999999999999999999999999886432111000                       


Q ss_pred             -------------ccccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhh
Q 028134           59 -------------VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQ  125 (213)
Q Consensus        59 -------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  125 (213)
                                   ......||..|+|||++....++.++|+||+||++|+|++|..||.......               
T Consensus       182 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~---------------  246 (364)
T cd05599         182 KRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQE---------------  246 (364)
T ss_pred             cccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHH---------------
Confidence                         0112358899999999988889999999999999999999999996332110               


Q ss_pred             hhhhhhccc--ccCCCCCHHHHHHHHHHHHhhcCcCCCCCCC---HHHHHH
Q 028134          126 KKFVHLVDP--LLHGRYPRRCLNYAVAVTAMCLNEEANFRPL---INDIVV  171 (213)
Q Consensus       126 ~~~~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps---~~ev~~  171 (213)
                       ....+++.  .............+.+++.+|+. +|.+|++   ++++++
T Consensus       247 -~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         247 -TYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             -HHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence             01111110  01101111345678899999996 9999998   888876


No 253
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.93  E-value=6.8e-26  Score=175.97  Aligned_cols=153  Identities=25%  Similarity=0.328  Sum_probs=109.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc---cC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SG   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~   78 (213)
                      .++.|++.|+.|||+.+   ++|+||+|+||+++.++.++++|||++........  ......++..|++||.+.   ..
T Consensus       110 ~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~  184 (267)
T cd06646         110 YVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATIA--KRKSFIGTPYWMAPEVAAVEKNG  184 (267)
T ss_pred             HHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeeccccc--ccCccccCccccCHhHcccccCC
Confidence            46889999999999998   99999999999999999999999999875422111  112235677899999874   34


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      .++.++|+||+|+++|+|++|..||.........  ....      ..   ....+..  .........+.+++.+||..
T Consensus       185 ~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~--~~~~------~~---~~~~~~~--~~~~~~~~~~~~li~~~l~~  251 (267)
T cd06646         185 GYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL--FLMS------KS---NFQPPKL--KDKTKWSSTFHNFVKISLTK  251 (267)
T ss_pred             CCcchhhHHHHHHHHHHHHhCCCCccccchhhhh--eeee------cC---CCCCCCC--ccccccCHHHHHHHHHHhhC
Confidence            4678999999999999999999998522211100  0000      00   0000000  01123456789999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 028134          159 EANFRPLINDIVVA  172 (213)
Q Consensus       159 ~p~~Rps~~ev~~~  172 (213)
                      +|++||++++|++.
T Consensus       252 ~P~~Rp~~~~il~~  265 (267)
T cd06646         252 NPKKRPTAERLLTH  265 (267)
T ss_pred             ChhhCcCHHHHhcC
Confidence            99999999999864


No 254
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.93  E-value=2e-25  Score=171.94  Aligned_cols=146  Identities=29%  Similarity=0.336  Sum_probs=115.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+.+   ++|+||+|.||+++.++.++|+|||++......    ......++..|++||.+.+..++
T Consensus       107 ~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~  179 (256)
T cd08530         107 RIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYS  179 (256)
T ss_pred             HHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC----CcccccCCccccCHHHHCCCCCC
Confidence            57789999999999998   999999999999999999999999998764332    11223467789999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|++++++++|..||......                 .....+.....+..+.....++.+++..||+.+|+
T Consensus       180 ~~~D~~slG~~~~~l~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  242 (256)
T cd08530         180 YKSDIWSLGCLLYEMATFAPPFEARSMQ-----------------DLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPK  242 (256)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHH-----------------HHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcc
Confidence            9999999999999999999998633211                 11111112222233446677899999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.++++
T Consensus       243 ~Rp~~~~~l~  252 (256)
T cd08530         243 LRPNCDKILA  252 (256)
T ss_pred             cCCCHHHHhc
Confidence            9999999975


No 255
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.92  E-value=2.2e-25  Score=181.82  Aligned_cols=151  Identities=28%  Similarity=0.321  Sum_probs=107.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC------------------------
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT------------------------   57 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~------------------------   57 (213)
                      .++.||+.||.|||+.+   |+||||||+||+++.++.++|+|||++.........                        
T Consensus       105 ~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (381)
T cd05626         105 FYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVS  181 (381)
T ss_pred             HHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCccccccccc
Confidence            36789999999999998   999999999999999999999999987532100000                        


Q ss_pred             ---------------------cccccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhh
Q 028134           58 ---------------------HVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS  116 (213)
Q Consensus        58 ---------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~  116 (213)
                                           .......|+..|+|||.+.+..++.++|+||+||++|||++|..||.......      
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~------  255 (381)
T cd05626         182 NCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTE------  255 (381)
T ss_pred             ccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHH------
Confidence                                 00112468899999999988889999999999999999999999996432111      


Q ss_pred             chhhhhhhhhhhhhhcc--cccCCCCCHHHHHHHHHHHHh--hcCcCCCCCCCHHHHHH
Q 028134          117 WSRPFLKDQKKFVHLVD--PLLHGRYPRRCLNYAVAVTAM--CLNEEANFRPLINDIVV  171 (213)
Q Consensus       117 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~--cl~~~p~~Rps~~ev~~  171 (213)
                                ....+++  .............++.+++.+  |+..+|..||++.+++.
T Consensus       256 ----------~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~  304 (381)
T cd05626         256 ----------TQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA  304 (381)
T ss_pred             ----------HHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence                      0011111  011111111345677788877  45566667999999987


No 256
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.92  E-value=1.7e-25  Score=195.09  Aligned_cols=162  Identities=23%  Similarity=0.327  Sum_probs=118.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCC----------------Ccccccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN----------------THVSTRVMG   65 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~----------------~~~~~~~~~   65 (213)
                      +++.|+++||+|||+++   ++||||||+||+++.++.++++|||++........                ........|
T Consensus       117 ~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vG  193 (932)
T PRK13184        117 SIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVG  193 (932)
T ss_pred             HHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCC
Confidence            57789999999999998   99999999999999999999999999875411100                001122458


Q ss_pred             cccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHH
Q 028134           66 TYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCL  145 (213)
Q Consensus        66 ~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (213)
                      +..|+|||.+.+..++.++|+||+||++|+|++|..||........   . .       .   .....+... ......+
T Consensus       194 T~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki---~-~-------~---~~i~~P~~~-~p~~~iP  258 (932)
T PRK13184        194 TPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI---S-Y-------R---DVILSPIEV-APYREIP  258 (932)
T ss_pred             CCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh---h-h-------h---hhccChhhc-cccccCC
Confidence            9999999999988999999999999999999999999964221100   0 0       0   000010000 0012345


Q ss_pred             HHHHHHHHhhcCcCCCCC-CCHHHHHHHHHHHhhccC
Q 028134          146 NYAVAVTAMCLNEEANFR-PLINDIVVALDYLVSQRD  181 (213)
Q Consensus       146 ~~~~~li~~cl~~~p~~R-ps~~ev~~~L~~l~~~~~  181 (213)
                      ..+.+++.+||..||++| ++++++.+.|+...+...
T Consensus       259 ~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p  295 (932)
T PRK13184        259 PFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSP  295 (932)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCc
Confidence            678899999999999999 467778888888776543


No 257
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.92  E-value=5.3e-25  Score=178.51  Aligned_cols=152  Identities=24%  Similarity=0.266  Sum_probs=106.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC------------------------
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT------------------------   57 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~------------------------   57 (213)
                      .++.|++.||+|||+++   ++||||||+||+++.++.++|+|||++.........                        
T Consensus       105 ~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (363)
T cd05628         105 FYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRK  181 (363)
T ss_pred             HHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccc
Confidence            47889999999999998   999999999999999999999999998643211000                        


Q ss_pred             ---------cccccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhh
Q 028134           58 ---------HVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKF  128 (213)
Q Consensus        58 ---------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (213)
                               .......|+..|+|||.+.+..++.++|+|||||++|||++|..||.......                ..
T Consensus       182 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~----------------~~  245 (363)
T cd05628         182 AETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQE----------------TY  245 (363)
T ss_pred             cchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHH----------------HH
Confidence                     00123468899999999998889999999999999999999999996322111                01


Q ss_pred             hhhcccccCCCCC--HHHHHHHHHHHHhhcC--cCCCCCCCHHHHHHH
Q 028134          129 VHLVDPLLHGRYP--RRCLNYAVAVTAMCLN--EEANFRPLINDIVVA  172 (213)
Q Consensus       129 ~~~~~~~~~~~~~--~~~~~~~~~li~~cl~--~~p~~Rps~~ev~~~  172 (213)
                      ..+........++  ......+.+++.+|+.  .++..||+++||++.
T Consensus       246 ~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         246 KKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             HHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence            1111100000011  1234566777776443  334456999999885


No 258
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.92  E-value=2.3e-25  Score=172.57  Aligned_cols=150  Identities=29%  Similarity=0.391  Sum_probs=115.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+++   ++|+||+|+||+++.++.++|+|||++.......   ......++..|++||.+.+..++
T Consensus        97 ~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~  170 (262)
T cd05572          97 FYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYD  170 (262)
T ss_pred             HHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccccCCcCccChhHhcCCCCC
Confidence            46789999999999998   9999999999999999999999999987543321   12234567789999998888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+|++|+++|++++|..||.......              ......+.+.......+......+.+++..||+.+|+
T Consensus       171 ~~~Di~slG~il~~l~~g~~p~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  236 (262)
T cd05572         171 FSVDYWSLGILLYELLTGRPPFGEDDEDP--------------MEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPE  236 (262)
T ss_pred             ChhhhhhhHHHHHHHHhCCCCcCCCCCCH--------------HHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChh
Confidence            99999999999999999999997443211              1111122222223334445577899999999999999


Q ss_pred             CCCC-----HHHHHH
Q 028134          162 FRPL-----INDIVV  171 (213)
Q Consensus       162 ~Rps-----~~ev~~  171 (213)
                      +||+     ++|+++
T Consensus       237 ~R~~~~~~~~~~l~~  251 (262)
T cd05572         237 ERLGNLKGGIKDIKK  251 (262)
T ss_pred             hCcCCcccCHHHHhc
Confidence            9999     777765


No 259
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.92  E-value=1.5e-25  Score=176.97  Aligned_cols=151  Identities=23%  Similarity=0.291  Sum_probs=113.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||.+.+..++
T Consensus       121 ~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  195 (297)
T cd06659         121 TVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRTPYG  195 (297)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc--ccccceecCccccCHHHHccCCCC
Confidence            57899999999999998   9999999999999999999999999886432211  112234577899999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++++|++|..||........   ..          .+.......  ..........+.+++.+||+.+|+
T Consensus       196 ~~~Dv~slG~il~el~~g~~p~~~~~~~~~---~~----------~~~~~~~~~--~~~~~~~~~~l~~~i~~~l~~~P~  260 (297)
T cd06659         196 TEVDIWSLGIMVIEMVDGEPPYFSDSPVQA---MK----------RLRDSPPPK--LKNAHKISPVLRDFLERMLTREPQ  260 (297)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HH----------HHhccCCCC--ccccCCCCHHHHHHHHHHhcCCcc
Confidence            999999999999999999999863221110   00          000000000  011123455688999999999999


Q ss_pred             CCCCHHHHHHH
Q 028134          162 FRPLINDIVVA  172 (213)
Q Consensus       162 ~Rps~~ev~~~  172 (213)
                      +||++.++++.
T Consensus       261 ~Rps~~~ll~~  271 (297)
T cd06659         261 ERATAQELLDH  271 (297)
T ss_pred             cCcCHHHHhhC
Confidence            99999999873


No 260
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.92  E-value=1.9e-25  Score=172.21  Aligned_cols=147  Identities=27%  Similarity=0.385  Sum_probs=111.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCC-CceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND-FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.++.|||+++   ++|+||+|+||+++.+ +.++++|||.+.......   ......++..|++||.+.+..+
T Consensus       105 ~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~  178 (256)
T cd08220         105 HFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS---KAYTVVGTPCYISPELCEGKPY  178 (256)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc---cccccccCCcccCchhccCCCC
Confidence            57889999999999998   9999999999999754 467999999987543221   1122456778999999988888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||+|+++|++++|..||.......                ........ .....+..+...+.+++..||+.+|
T Consensus       179 ~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~----------------~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p  241 (256)
T cd08220         179 NQKSDIWALGCVLYELASLKRAFEAANLPA----------------LVLKIMSG-TFAPISDRYSPDLRQLILSMLNLDP  241 (256)
T ss_pred             CcccchHHHHHHHHHHHhCCCCcccCchHH----------------HHHHHHhc-CCCCCCCCcCHHHHHHHHHHccCCh
Confidence            999999999999999999999985322110                00111111 1112233456778999999999999


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      ++|||+.++++
T Consensus       242 ~~Rpt~~~ll~  252 (256)
T cd08220         242 SKRPQLSQIMA  252 (256)
T ss_pred             hhCCCHHHHhh
Confidence            99999999975


No 261
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.92  E-value=2e-25  Score=173.64  Aligned_cols=149  Identities=26%  Similarity=0.369  Sum_probs=110.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS----   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~----   77 (213)
                      .++.|++.||.|||+++   ++|+||+|+||+++.++.++|+|||.+......  ........++..|++||.+..    
T Consensus       117 ~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~  191 (275)
T cd06608         117 YILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDST--LGRRNTFIGTPYWMAPEVIACDEQP  191 (275)
T ss_pred             HHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCccceecccc--hhhhcCccccccccCHhHhcccccc
Confidence            47889999999999998   999999999999999999999999987653221  111223456788999998753    


Q ss_pred             -CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhccccc-CCCCCHHHHHHHHHHHHhh
Q 028134           78 -GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGRYPRRCLNYAVAVTAMC  155 (213)
Q Consensus        78 -~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~c  155 (213)
                       ..++.++|+||+|++++++++|..||......                .....+..... ....+......+.+++.+|
T Consensus       192 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  255 (275)
T cd06608         192 DASYDARSDVWSLGITAIELADGKPPLCDMHPM----------------RALFKIPRNPPPTLKSPENWSKKFNDFISEC  255 (275)
T ss_pred             cCCccccccHHHhHHHHHHHHhCCCCccccchH----------------HHHHHhhccCCCCCCchhhcCHHHHHHHHHH
Confidence             24577899999999999999999998522111                11111111110 1111233567889999999


Q ss_pred             cCcCCCCCCCHHHHHH
Q 028134          156 LNEEANFRPLINDIVV  171 (213)
Q Consensus       156 l~~~p~~Rps~~ev~~  171 (213)
                      |..||++|||+.++++
T Consensus       256 l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         256 LIKNYEQRPFMEELLE  271 (275)
T ss_pred             hhcChhhCcCHHHHhc
Confidence            9999999999999975


No 262
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.92  E-value=2.8e-25  Score=172.37  Aligned_cols=150  Identities=25%  Similarity=0.302  Sum_probs=112.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC-cccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT-HVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.||+|||+++   ++|+||+|+||+++.++.++|+|||.+......... .......++..|++||...+..+
T Consensus       110 ~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  186 (265)
T cd06652         110 KYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGY  186 (265)
T ss_pred             HHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCC
Confidence            57899999999999998   999999999999999999999999988753211111 11122346778999999888888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||||+++|++++|..||.....                .....+.......+..+......+.+++.+||. +|
T Consensus       187 ~~~~Dv~slG~il~el~~g~~p~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p  249 (265)
T cd06652         187 GRKADIWSVGCTVVEMLTEKPPWAEFEA----------------MAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EA  249 (265)
T ss_pred             CcchhHHHHHHHHHHHhhCCCCCCccch----------------HHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-Ch
Confidence            9999999999999999999999852210                111111111112233455666778889999984 99


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      ++||++++|++
T Consensus       250 ~~Rp~~~~il~  260 (265)
T cd06652         250 KLRPSADELLR  260 (265)
T ss_pred             hhCCCHHHHhc
Confidence            99999999975


No 263
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.92  E-value=4e-25  Score=180.06  Aligned_cols=151  Identities=22%  Similarity=0.257  Sum_probs=108.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC------------c-----------
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT------------H-----------   58 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~------------~-----------   58 (213)
                      .++.|++.||+|||+++   ++||||||+||+++.++.++|+|||++..+......            .           
T Consensus       105 ~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (377)
T cd05629         105 FYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAV  181 (377)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccccccccccccccccccccccccccccccc
Confidence            36889999999999998   999999999999999999999999998532110000            0           


Q ss_pred             ----------------------ccccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhh
Q 028134           59 ----------------------VSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS  116 (213)
Q Consensus        59 ----------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~  116 (213)
                                            ......|+..|+|||.+.+..++.++|+||+||++|||++|..||........     
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-----  256 (377)
T cd05629         182 DSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHET-----  256 (377)
T ss_pred             ccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHH-----
Confidence                                  00123588899999999888899999999999999999999999963321110     


Q ss_pred             chhhhhhhhhhhhhhcccccCCCCC--HHHHHHHHHHHHhhcCcCCCCC---CCHHHHHHH
Q 028134          117 WSRPFLKDQKKFVHLVDPLLHGRYP--RRCLNYAVAVTAMCLNEEANFR---PLINDIVVA  172 (213)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~R---ps~~ev~~~  172 (213)
                                 ...+........++  .....++.+++.+|+. +|.+|   +++.+++..
T Consensus       257 -----------~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         257 -----------YRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             -----------HHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence                       01111100001111  1345678899999997 66665   699998874


No 264
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.92  E-value=9.8e-25  Score=196.59  Aligned_cols=172  Identities=30%  Similarity=0.541  Sum_probs=126.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|+++|++|||....++++||||||+||+++.++..++. ++.......      .....++..|+|||++.+..++
T Consensus       784 ~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~  856 (968)
T PLN00113        784 KIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT------DTKCFISSAYVAPETRETKDIT  856 (968)
T ss_pred             HHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc------CCCccccccccCcccccCCCCC
Confidence            578999999999995533349999999999999988877764 554332111      1122467889999999988999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCC--CCHHHHHHHHHHHHhhcCcC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR--YPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~  159 (213)
                      .++|||||||++|||++|+.||+..... .....+|...... .......+++.....  .+.....++.+++.+||+.+
T Consensus       857 ~~sDv~S~Gvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~  934 (968)
T PLN00113        857 EKSDIYGFGLILIELLTGKSPADAEFGV-HGSIVEWARYCYS-DCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATD  934 (968)
T ss_pred             cccchhhHHHHHHHHHhCCCCCCcccCC-CCcHHHHHHHhcC-ccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCC
Confidence            9999999999999999999999533222 2233444433222 233444555555332  34466678899999999999


Q ss_pred             CCCCCCHHHHHHHHHHHhhccCC
Q 028134          160 ANFRPLINDIVVALDYLVSQRDS  182 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l~~~~~~  182 (213)
                      |++||++.||++.|+++.+..+.
T Consensus       935 P~~RPt~~evl~~L~~~~~~~~~  957 (968)
T PLN00113        935 PTARPCANDVLKTLESASRSSSS  957 (968)
T ss_pred             chhCcCHHHHHHHHHHhhccccc
Confidence            99999999999999988775543


No 265
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.92  E-value=3.8e-25  Score=177.32  Aligned_cols=151  Identities=20%  Similarity=0.213  Sum_probs=108.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc-----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-----   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-----   76 (213)
                      .++.|++.||.|||+.+   ++||||||+||+++.++.++|+|||++....... ........++..|++||++.     
T Consensus       106 ~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~  181 (332)
T cd05623         106 FYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-TVQSSVAVGTPDYISPEILQAMEDG  181 (332)
T ss_pred             HHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCC-cceecccccCccccCHHHHhccccC
Confidence            46789999999999998   9999999999999999999999999986432211 11122346889999999886     


Q ss_pred             cCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccC---CCCCHHHHHHHHHHHH
Q 028134           77 SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLH---GRYPRRCLNYAVAVTA  153 (213)
Q Consensus        77 ~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~  153 (213)
                      ...++.++|+|||||++|||++|..||......                .....+.....+   +.....+...+.+++.
T Consensus       182 ~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~----------------~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~  245 (332)
T cd05623         182 KGKYGPECDWWSLGVCMYEMLYGETPFYAESLV----------------ETYGKIMNHKERFQFPAQVTDVSEDAKDLIR  245 (332)
T ss_pred             CCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH----------------HHHHHHhCCCccccCCCccccCCHHHHHHHH
Confidence            235788999999999999999999999632211                111111111111   1112245677888999


Q ss_pred             hhcCcCCCC--CCCHHHHHHH
Q 028134          154 MCLNEEANF--RPLINDIVVA  172 (213)
Q Consensus       154 ~cl~~~p~~--Rps~~ev~~~  172 (213)
                      +|+..++.+  |++++++++.
T Consensus       246 ~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         246 RLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             HHccChhhhcCCCCHHHHhCC
Confidence            988665544  6899999875


No 266
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.92  E-value=4.1e-25  Score=171.49  Aligned_cols=154  Identities=24%  Similarity=0.368  Sum_probs=115.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC-ceEEeeeecccccCCCCC--CcccccccccccccCccccccC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF-NPKLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYAMSG   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~-~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~Pe~~~~~   78 (213)
                      +++.|++.||.|||+++   ++|+||+|+||+++.++ .++|+|||.+........  ........++..|++||.+.+.
T Consensus       107 ~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~  183 (268)
T cd06630         107 NYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGE  183 (268)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccC
Confidence            57899999999999998   99999999999998775 589999999865432211  1112234567889999998888


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      .++.++|+|++|++++++++|..||.........             ...............+......+.+++.+||..
T Consensus       184 ~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  250 (268)
T cd06630         184 QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL-------------ALIFKIASATTAPSIPEHLSPGLRDVTLRCLEL  250 (268)
T ss_pred             CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH-------------HHHHHHhccCCCCCCchhhCHHHHHHHHHHcCC
Confidence            8899999999999999999999998532221110             111111111222334556678899999999999


Q ss_pred             CCCCCCCHHHHHH
Q 028134          159 EANFRPLINDIVV  171 (213)
Q Consensus       159 ~p~~Rps~~ev~~  171 (213)
                      +|++||++.++++
T Consensus       251 ~p~~R~~~~~ll~  263 (268)
T cd06630         251 QPEDRPPSRELLK  263 (268)
T ss_pred             CcccCcCHHHHhc
Confidence            9999999999974


No 267
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.92  E-value=1.9e-25  Score=177.70  Aligned_cols=151  Identities=26%  Similarity=0.312  Sum_probs=112.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC------------------------
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT------------------------   57 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~------------------------   57 (213)
                      .++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||++.........                        
T Consensus       107 ~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (316)
T cd05574         107 FYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSE  183 (316)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcc
Confidence            46789999999999998   999999999999999999999999987653221100                        


Q ss_pred             ---cccccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhccc
Q 028134           58 ---HVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDP  134 (213)
Q Consensus        58 ---~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (213)
                         .......++..|++||.+.+..++.++|+||||+++|++++|..||......                .....+...
T Consensus       184 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~----------------~~~~~~~~~  247 (316)
T cd05574         184 EPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD----------------ETFSNILKK  247 (316)
T ss_pred             cccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH----------------HHHHHHhcC
Confidence               0011235678899999998888899999999999999999999998633211                111222222


Q ss_pred             ccCCCCCHHHHHHHHHHHHhhcCcCCCCCCC----HHHHHH
Q 028134          135 LLHGRYPRRCLNYAVAVTAMCLNEEANFRPL----INDIVV  171 (213)
Q Consensus       135 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps----~~ev~~  171 (213)
                      .............+.+++.+||+.+|++||+    ++++++
T Consensus       248 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         248 EVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             CccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            2111112225678999999999999999999    777765


No 268
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.92  E-value=3.4e-25  Score=180.06  Aligned_cols=151  Identities=22%  Similarity=0.234  Sum_probs=109.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCC--
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK--   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~--   79 (213)
                      .++.||+.||.|||+++   ++||||||+||+++.++.++|+|||++....... ........++..|+|||.+.+..  
T Consensus       146 ~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~  221 (371)
T cd05622         146 FYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGD  221 (371)
T ss_pred             HHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC-cccccCcccCccccCHHHHhccCCC
Confidence            36789999999999998   9999999999999999999999999987542211 11123456889999999887543  


Q ss_pred             --CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccc--cCCCCCHHHHHHHHHHHHhh
Q 028134           80 --LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL--LHGRYPRRCLNYAVAVTAMC  155 (213)
Q Consensus        80 --~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~c  155 (213)
                        ++.++|+||+||++|+|++|..||......                .....+....  ............+.+++..|
T Consensus       222 ~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~----------------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  285 (371)
T cd05622         222 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----------------GTYSKIMNHKNSLTFPDDNDISKEAKNLICAF  285 (371)
T ss_pred             ccCCCccceeehhHHHHHHHhCCCCCCCCCHH----------------HHHHHHHcCCCcccCCCcCCCCHHHHHHHHHH
Confidence              678999999999999999999999632211                1111111111  11111224567788999999


Q ss_pred             cCcCCCC--CCCHHHHHHH
Q 028134          156 LNEEANF--RPLINDIVVA  172 (213)
Q Consensus       156 l~~~p~~--Rps~~ev~~~  172 (213)
                      +...+.+  |+++++|++.
T Consensus       286 L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         286 LTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             cCChhhhcCCCCHHHHhcC
Confidence            9844443  7899988874


No 269
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.92  E-value=3.3e-25  Score=174.30  Aligned_cols=149  Identities=25%  Similarity=0.305  Sum_probs=109.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC---
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG---   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~---   78 (213)
                      .++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........  ......++..|++||.+...   
T Consensus       132 ~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~  206 (291)
T cd06639         132 YILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQY  206 (291)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCc
Confidence            47889999999999998   99999999999999999999999999875322111  11223467889999987543   


Q ss_pred             --CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhccc-ccCCCCCHHHHHHHHHHHHhh
Q 028134           79 --KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDP-LLHGRYPRRCLNYAVAVTAMC  155 (213)
Q Consensus        79 --~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~c  155 (213)
                        .++.++|+||+||++|++++|..||......                .....+... ......+......+.++|.+|
T Consensus       207 ~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  270 (291)
T cd06639         207 DYSYDARCDVWSLGITAIELGDGDPPLFDMHPV----------------KTLFKIPRNPPPTLLHPEKWCRSFNHFISQC  270 (291)
T ss_pred             ccccCCccchHHHHHHHHHHhhCCCCCCCCcHH----------------HHHHHHhcCCCCCCCcccccCHHHHHHHHHH
Confidence              3578999999999999999999998532111                001111100 000011233456789999999


Q ss_pred             cCcCCCCCCCHHHHHH
Q 028134          156 LNEEANFRPLINDIVV  171 (213)
Q Consensus       156 l~~~p~~Rps~~ev~~  171 (213)
                      |+.+|++||++.++++
T Consensus       271 l~~~p~~Rps~~~il~  286 (291)
T cd06639         271 LIKDFEARPSVTHLLE  286 (291)
T ss_pred             hhcChhhCcCHHHHhc
Confidence            9999999999999985


No 270
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.92  E-value=2.3e-25  Score=181.79  Aligned_cols=150  Identities=24%  Similarity=0.264  Sum_probs=107.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCC-------------------------
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN-------------------------   56 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~-------------------------   56 (213)
                      .++.||+.||.|||+++   |+||||||+||+++.++.++|+|||++........                         
T Consensus       105 ~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (382)
T cd05625         105 FYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPA  181 (382)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccc
Confidence            36789999999999998   99999999999999999999999998643210000                         


Q ss_pred             --------------------CcccccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhh
Q 028134           57 --------------------THVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS  116 (213)
Q Consensus        57 --------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~  116 (213)
                                          ........|+..|+|||.+.+..++.++|+||+||++|||++|..||.......      
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~------  255 (382)
T cd05625         182 NCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLE------  255 (382)
T ss_pred             cccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHH------
Confidence                                000112357899999999998899999999999999999999999996432111      


Q ss_pred             chhhhhhhhhhhhhhcc--cccCCCCCHHHHHHHHHHHHhhcCcCCCCCCC---HHHHHH
Q 028134          117 WSRPFLKDQKKFVHLVD--PLLHGRYPRRCLNYAVAVTAMCLNEEANFRPL---INDIVV  171 (213)
Q Consensus       117 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps---~~ev~~  171 (213)
                                ....++.  ............+++.+++..|+ .+|.+|++   +.+++.
T Consensus       256 ----------~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~  304 (382)
T cd05625         256 ----------TQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA  304 (382)
T ss_pred             ----------HHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence                      1111111  11111111234556777777765 59999987   887765


No 271
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.92  E-value=2.3e-25  Score=174.43  Aligned_cols=149  Identities=26%  Similarity=0.339  Sum_probs=113.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc-cCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-SGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-~~~~   80 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++++|||++.......    .....++..|++||... +..+
T Consensus       101 ~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~  173 (279)
T cd05633         101 FYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGTAY  173 (279)
T ss_pred             HHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC----ccCcCCCcCccCHHHhcCCCCC
Confidence            47899999999999998   9999999999999999999999999986432211    12235788999999876 4567


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||+||++|++++|..||.........              ..... ........+......+.+++..||..||
T Consensus       174 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--------------~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p  238 (279)
T cd05633         174 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--------------EIDRM-TLTVNVELPDSFSPELKSLLEGLLQRDV  238 (279)
T ss_pred             CchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH--------------HHHHH-hhcCCcCCccccCHHHHHHHHHHhcCCH
Confidence            88999999999999999999999643222110              00000 0111222344566789999999999999


Q ss_pred             CCCC-----CHHHHHHH
Q 028134          161 NFRP-----LINDIVVA  172 (213)
Q Consensus       161 ~~Rp-----s~~ev~~~  172 (213)
                      .+||     +++|+++.
T Consensus       239 ~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         239 SKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             HHhcCCCCCCHHHHHhC
Confidence            9999     59988773


No 272
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.92  E-value=3.2e-25  Score=175.97  Aligned_cols=164  Identities=24%  Similarity=0.371  Sum_probs=112.9

Q ss_pred             hhHHHHHHHHHHhhc-CCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHC-KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~-~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      .++.|+++||.|||+ .+   ++|+||+|+||+++.++.++|+|||++......    ......++..|++||.+.+..+
T Consensus       103 ~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~  175 (308)
T cd06615         103 KISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHY  175 (308)
T ss_pred             HHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccccccc----ccccCCCCcCccChhHhcCCCC
Confidence            578999999999997 46   999999999999999999999999987643221    1223456789999999888888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhh----------------hhhhhhhcccc---cCCCCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKD----------------QKKFVHLVDPL---LHGRYP  141 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~---~~~~~~  141 (213)
                      +.++|+||||+++|++++|..||.....................                .....+..+..   ..+..+
T Consensus       176 ~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (308)
T cd06615         176 TVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLP  255 (308)
T ss_pred             CccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCc
Confidence            89999999999999999999998643211111100000000000                00000111100   011111


Q ss_pred             -HHHHHHHHHHHHhhcCcCCCCCCCHHHHHHH
Q 028134          142 -RRCLNYAVAVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       142 -~~~~~~~~~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                       ......+.+++.+||..+|++||+++++++.
T Consensus       256 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         256 SGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             1245678999999999999999999999864


No 273
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.92  E-value=2.5e-25  Score=172.57  Aligned_cols=151  Identities=26%  Similarity=0.327  Sum_probs=113.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCC----CcccccccccccccCcccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN----THVSTRVMGTYGYCAPEYAMS   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~Pe~~~~   77 (213)
                      .++.|++.|++|||+.+   ++|+||+|+||+++.++.++|+|||++........    ........++..|++||...+
T Consensus       106 ~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  182 (265)
T cd06631         106 KYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE  182 (265)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcC
Confidence            46889999999999998   99999999999999999999999998875321111    111123456788999999988


Q ss_pred             CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhccc-ccCCCCCHHHHHHHHHHHHhhc
Q 028134           78 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDP-LLHGRYPRRCLNYAVAVTAMCL  156 (213)
Q Consensus        78 ~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl  156 (213)
                      ..++.++|+|++|+++|++++|..||.......                ........ ......+..+...+.+++.+||
T Consensus       183 ~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  246 (265)
T cd06631         183 SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA----------------AMFYIGAHRGLMPRLPDSFSAAAIDFVTSCL  246 (265)
T ss_pred             CCCcchhhHHHHHHHHHHHHhCCCccccCChHH----------------HHHHhhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence            888999999999999999999999996321110                00000000 1112233456677899999999


Q ss_pred             CcCCCCCCCHHHHHH
Q 028134          157 NEEANFRPLINDIVV  171 (213)
Q Consensus       157 ~~~p~~Rps~~ev~~  171 (213)
                      +.+|.+||++.++++
T Consensus       247 ~~~p~~Rp~~~~~l~  261 (265)
T cd06631         247 TRDQHERPSALQLLR  261 (265)
T ss_pred             cCCcccCCCHHHHhc
Confidence            999999999999874


No 274
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.92  E-value=2.7e-25  Score=172.57  Aligned_cols=152  Identities=26%  Similarity=0.335  Sum_probs=109.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc---cC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SG   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~   78 (213)
                      .++.|++.|+.|||+.+   ++|+||+|+||+++.++.++|+|||++......  ........++..|+|||.+.   ..
T Consensus       110 ~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~  184 (267)
T cd06645         110 YVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKG  184 (267)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCc--ccccccccCcccccChhhhccccCC
Confidence            47789999999999998   999999999999999999999999998653221  11123346788999999874   44


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      .++.++|+||+||++|++++|..||.........  ..     .. .   .....+....  ...+...+.+++.+||..
T Consensus       185 ~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~--~~-----~~-~---~~~~~~~~~~--~~~~~~~~~~li~~~l~~  251 (267)
T cd06645         185 GYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL--FL-----MT-K---SNFQPPKLKD--KMKWSNSFHHFVKMALTK  251 (267)
T ss_pred             CCCchhhhHHHHHHHHHHhcCCCCcccccchhhH--Hh-----hh-c---cCCCCCcccc--cCCCCHHHHHHHHHHccC
Confidence            5788999999999999999999998532211100  00     00 0   0000000000  112345688999999999


Q ss_pred             CCCCCCCHHHHHH
Q 028134          159 EANFRPLINDIVV  171 (213)
Q Consensus       159 ~p~~Rps~~ev~~  171 (213)
                      +|++||++++|++
T Consensus       252 ~P~~R~~~~~ll~  264 (267)
T cd06645         252 NPKKRPTAEKLLQ  264 (267)
T ss_pred             CchhCcCHHHHhc
Confidence            9999999999875


No 275
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.92  E-value=4.6e-25  Score=172.92  Aligned_cols=150  Identities=25%  Similarity=0.302  Sum_probs=110.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS----   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~----   77 (213)
                      .++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++.......  .......++..|++||.+..    
T Consensus       128 ~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  202 (286)
T cd06638         128 YILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQL  202 (286)
T ss_pred             HHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEEccCCceeecccCC--CccccccCCCcccChhhhchhhhc
Confidence            37789999999999998   9999999999999999999999999987542211  11223457889999998753    


Q ss_pred             -CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccc-cCCCCCHHHHHHHHHHHHhh
Q 028134           78 -GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL-LHGRYPRRCLNYAVAVTAMC  155 (213)
Q Consensus        78 -~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c  155 (213)
                       ..++.++|+||+||++|++++|..||........                ........ .....+..+...+.+++.+|
T Consensus       203 ~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~  266 (286)
T cd06638         203 DSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA----------------LFKIPRNPPPTLHQPELWSNEFNDFIRKC  266 (286)
T ss_pred             cccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH----------------HhhccccCCCcccCCCCcCHHHHHHHHHH
Confidence             3467899999999999999999999863221110                00000000 00011223455789999999


Q ss_pred             cCcCCCCCCCHHHHHHH
Q 028134          156 LNEEANFRPLINDIVVA  172 (213)
Q Consensus       156 l~~~p~~Rps~~ev~~~  172 (213)
                      |+.+|++||++.|+++.
T Consensus       267 l~~~p~~Rps~~ell~~  283 (286)
T cd06638         267 LTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             ccCCcccCCCHHHHhhc
Confidence            99999999999999864


No 276
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.92  E-value=7.3e-25  Score=173.73  Aligned_cols=146  Identities=28%  Similarity=0.400  Sum_probs=109.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc---cC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SG   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~   78 (213)
                      .++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++......      ....++..|++||.+.   ..
T Consensus       119 ~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~  189 (307)
T cd06607         119 AICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA------NSFVGTPYWMAPEVILAMDEG  189 (307)
T ss_pred             HHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC------CCccCCccccCceeeeccCCC
Confidence            47889999999999998   999999999999999999999999988643211      1234677899999874   34


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      .++.++|+||||+++|++++|..||.......                ....+............+...+.+++.+||+.
T Consensus       190 ~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  253 (307)
T cd06607         190 QYDGKVDVWSLGITCIELAERKPPLFNMNAMS----------------ALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQK  253 (307)
T ss_pred             CCCcccchHHHHHHHHHHHcCCCCCCCccHHH----------------HHHHHhcCCCCCCCchhhCHHHHHHHHHHhcC
Confidence            57889999999999999999999985321110                00001110001111234567899999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 028134          159 EANFRPLINDIVVA  172 (213)
Q Consensus       159 ~p~~Rps~~ev~~~  172 (213)
                      +|++||++.+|+..
T Consensus       254 ~p~~Rp~~~~il~~  267 (307)
T cd06607         254 IPQDRPSSEELLKH  267 (307)
T ss_pred             ChhhCcCHHHHhcC
Confidence            99999999999863


No 277
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.92  E-value=1.5e-25  Score=176.33  Aligned_cols=165  Identities=23%  Similarity=0.297  Sum_probs=112.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      +++.|++.||+|||+++   ++|+||+|+||+++.++.++|+|||++........  ......++..|++||.+.+. .+
T Consensus       110 ~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~  184 (293)
T cd07843         110 CLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK--PYTQLVVTLWYRAPELLLGAKEY  184 (293)
T ss_pred             HHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccCCcc--ccccccccccccCchhhcCCccc
Confidence            57899999999999998   99999999999999999999999998876433211  11223457789999988754 35


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhh----------chh--hhhh-hhhhhhhhcccccCCCCCHH-HHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS----------WSR--PFLK-DQKKFVHLVDPLLHGRYPRR-CLN  146 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~----------~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~~~  146 (213)
                      +.++|+||+|+++|+|++|..||...........+.          |..  .... ................++.. ...
T Consensus       185 ~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (293)
T cd07843         185 STAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSD  264 (293)
T ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCCh
Confidence            789999999999999999999986433221110000          000  0000 00000000000111112222 466


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+.++|..||+.+|++||++.|++.
T Consensus       265 ~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         265 NGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             HHHHHHHHHhccCccccCCHHHHhc
Confidence            7899999999999999999999975


No 278
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.92  E-value=2.5e-25  Score=173.76  Aligned_cols=144  Identities=25%  Similarity=0.313  Sum_probs=105.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC-------ceEEeeeecccccCCCCCCcccccccccccccCccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF-------NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY   74 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~-------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   74 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++..+       .++++|||.+......      ....++..|++||.
T Consensus       121 ~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~  191 (274)
T cd05076         121 TVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPEC  191 (274)
T ss_pred             HHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcccCccceeeecCCccccccccc------cccccCCcccCchh
Confidence            68899999999999998   99999999999997543       4799999987542111      11235677999998


Q ss_pred             ccc-CCCCCccceeeHHHHHHHHH-hCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHH
Q 028134           75 AMS-GKLTLKSDIYSFGVVLLELI-TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVT  152 (213)
Q Consensus        75 ~~~-~~~~~~~Di~slG~~~~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  152 (213)
                      +.+ ..++.++|+||||+++||++ .|..||........                 ...+....  ..+......+.+++
T Consensus       192 ~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-----------------~~~~~~~~--~~~~~~~~~~~~li  252 (274)
T cd05076         192 VPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-----------------ERFYEKKH--RLPEPSCKELATLI  252 (274)
T ss_pred             hcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH-----------------HHHHHhcc--CCCCCCChHHHHHH
Confidence            865 46789999999999999985 68888863221110                 00111111  11122335689999


Q ss_pred             HhhcCcCCCCCCCHHHHHHHH
Q 028134          153 AMCLNEEANFRPLINDIVVAL  173 (213)
Q Consensus       153 ~~cl~~~p~~Rps~~ev~~~L  173 (213)
                      .+||+.+|++||++.+|++.|
T Consensus       253 ~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         253 SQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             HHHcccChhhCcCHHHHHHhh
Confidence            999999999999999999876


No 279
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.92  E-value=6.2e-25  Score=170.99  Aligned_cols=155  Identities=27%  Similarity=0.404  Sum_probs=110.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCC--
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK--   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~--   79 (213)
                      .++.|++.||.|||+++   ++|+||+|+||+++.++.++++|||++................++..|++||......  
T Consensus       112 ~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  188 (272)
T cd06629         112 FFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQG  188 (272)
T ss_pred             HHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCC
Confidence            46789999999999998   9999999999999999999999999986532211111122234677899999877644  


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      ++.++|+||+|+++|++++|..||........  ..+     .. ...    ............+...+.+++..||..+
T Consensus       189 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~-----~~-~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~  256 (272)
T cd06629         189 YSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA--MFK-----LG-NKR----SAPPIPPDVSMNLSPVALDFLNACFTIN  256 (272)
T ss_pred             CCccchhHHHHHHHHHHHhCCCCCcCcchHHH--HHH-----hh-ccc----cCCcCCccccccCCHHHHHHHHHHhcCC
Confidence            78899999999999999999999852211100  000     00 000    0011111112235678999999999999


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      |++||++++|++
T Consensus       257 p~~Rps~~~il~  268 (272)
T cd06629         257 PDNRPTARELLQ  268 (272)
T ss_pred             hhhCCCHHHHhh
Confidence            999999999875


No 280
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=99.92  E-value=3e-25  Score=170.90  Aligned_cols=148  Identities=27%  Similarity=0.347  Sum_probs=114.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|+.+||+++   ++|+||+|+||+++.++.++|+|||.+.......  .......++..|++||...+..++
T Consensus       107 ~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~  181 (258)
T cd08215         107 DWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYN  181 (258)
T ss_pred             HHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc--ceecceeeeecccChhHhccCCCC
Confidence            57899999999999998   9999999999999999999999999987542222  122334567789999998888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .+.|+|++|++++++++|..||......                 ..............+..+...+.+++.+||..+|+
T Consensus       182 ~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  244 (258)
T cd08215         182 YKSDIWSLGCVLYELCTLKHPFEGENLL-----------------ELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPE  244 (258)
T ss_pred             ccccHHHHHHHHHHHHcCCCCCCCCcHH-----------------HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence            9999999999999999999998633211                 00001111112223445667899999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.++++
T Consensus       245 ~Rp~~~~ll~  254 (258)
T cd08215         245 ERPSIAQILQ  254 (258)
T ss_pred             hCcCHHHHhc
Confidence            9999999975


No 281
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.92  E-value=4.8e-25  Score=169.64  Aligned_cols=152  Identities=27%  Similarity=0.349  Sum_probs=117.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|+++|++|||+.+   ++|+||+|+||+++.++.++|+|||.+................++..|.+||...+...+
T Consensus       105 ~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~  181 (260)
T cd06606         105 KYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYG  181 (260)
T ss_pred             HHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCC
Confidence            57899999999999998   999999999999999999999999998764333221112334577889999998888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+|++|++++++++|..||.....  .             ................+......+.+++.+||+.+|+
T Consensus       182 ~~~Dv~slG~il~~l~~g~~p~~~~~~--~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~  246 (260)
T cd06606         182 RAADIWSLGCTVIEMATGKPPWSELGN--P-------------MAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPK  246 (260)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCc--h-------------HHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChh
Confidence            999999999999999999999864330  0             0111111111222234455578899999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.++++
T Consensus       247 ~Rp~~~~ll~  256 (260)
T cd06606         247 KRPTADELLQ  256 (260)
T ss_pred             hCCCHHHHhh
Confidence            9999999975


No 282
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.92  E-value=1.2e-24  Score=173.12  Aligned_cols=181  Identities=24%  Similarity=0.288  Sum_probs=130.8

Q ss_pred             hhHHHHHHHHHHhhcCC------CCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccc
Q 028134            2 KIAVGAARGLEYLHCKA------NPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA   75 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~------~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   75 (213)
                      +++..+++||+|||+.-      |++|+|||||+.|||+..++++.|+|||++..+.........-.+.||..|||||++
T Consensus       311 ria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvL  390 (534)
T KOG3653|consen  311 RIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVL  390 (534)
T ss_pred             HHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHH
Confidence            68899999999999652      778999999999999999999999999999887654444444448899999999988


Q ss_pred             ccCC------CCCccceeeHHHHHHHHHhCCCCccc-cCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCH-----H
Q 028134           76 MSGK------LTLKSDIYSFGVVLLELITGRKAMDL-SKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPR-----R  143 (213)
Q Consensus        76 ~~~~------~~~~~Di~slG~~~~~l~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  143 (213)
                      .+.-      .-.+.||||+|.|+|||+++-..+.. ........+..-......-+....-++.+..++.++.     .
T Consensus       391 Egainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~  470 (534)
T KOG3653|consen  391 EGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHA  470 (534)
T ss_pred             hhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCc
Confidence            7531      12579999999999999987554432 1111111121111111111222223344455555443     4


Q ss_pred             HHHHHHHHHHhhcCcCCCCCCCHHHHHHHHHHHhhccCC
Q 028134          144 CLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDS  182 (213)
Q Consensus       144 ~~~~~~~li~~cl~~~p~~Rps~~ev~~~L~~l~~~~~~  182 (213)
                      ....+.+.+..||..||+.|-|+.-+.+++..+......
T Consensus       471 ~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~  509 (534)
T KOG3653|consen  471 GMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED  509 (534)
T ss_pred             cHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence            567789999999999999999999999999998876553


No 283
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.92  E-value=1.2e-25  Score=183.10  Aligned_cols=151  Identities=25%  Similarity=0.280  Sum_probs=108.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCC-------------------------
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN-------------------------   56 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~-------------------------   56 (213)
                      .++.||+.||+|||+++   |+||||||+||+++.++.++|+|||++..+.....                         
T Consensus       105 ~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (376)
T cd05598         105 FYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEID  181 (376)
T ss_pred             HHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccc
Confidence            36789999999999998   99999999999999999999999998742210000                         


Q ss_pred             ----------------CcccccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhh
Q 028134           57 ----------------THVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRP  120 (213)
Q Consensus        57 ----------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~  120 (213)
                                      ........|+..|+|||.+.+..++.++|+||+||++|+|++|..||.........        
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~--------  253 (376)
T cd05598         182 RCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQ--------  253 (376)
T ss_pred             cccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHH--------
Confidence                            00011235889999999999888999999999999999999999999643321110        


Q ss_pred             hhhhhhhhhhhcc--cccCCCCCHHHHHHHHHHHHhhcCcCCCCCC---CHHHHHHH
Q 028134          121 FLKDQKKFVHLVD--PLLHGRYPRRCLNYAVAVTAMCLNEEANFRP---LINDIVVA  172 (213)
Q Consensus       121 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp---s~~ev~~~  172 (213)
                              ..+..  ..............+.+++.+|+ .+|.+|+   ++.++++.
T Consensus       254 --------~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         254 --------LKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             --------HHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence                    00110  00011111234556778888866 5999999   88999863


No 284
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.92  E-value=3.2e-25  Score=177.28  Aligned_cols=167  Identities=19%  Similarity=0.213  Sum_probs=108.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCC-C----cccccccccccccCccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN-T----HVSTRVMGTYGYCAPEYAM   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~----~~~~~~~~~~~~~~Pe~~~   76 (213)
                      +++.|++.||+|||+++   ++|+||||+||+++.++.+++.||+.......... .    .......++..|++||.+.
T Consensus       105 ~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (327)
T cd08227         105 YILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQ  181 (327)
T ss_pred             HHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhh
Confidence            57899999999999998   99999999999999999999999876433211110 0    0111223566799999987


Q ss_pred             c--CCCCCccceeeHHHHHHHHHhCCCCccccCCCCcc-chhhchhhh------hhhhh------------hhhhh----
Q 028134           77 S--GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ-NLVSWSRPF------LKDQK------------KFVHL----  131 (213)
Q Consensus        77 ~--~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~-~~~~~~~~~------~~~~~------------~~~~~----  131 (213)
                      +  ..++.++|+||+||++|++++|..||......... .......+.      .....            .....    
T Consensus       182 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (327)
T cd08227         182 QNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVS  261 (327)
T ss_pred             cccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccC
Confidence            5  35789999999999999999999999632211000 000000000      00000            00000    


Q ss_pred             -c----ccccCCCCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          132 -V----DPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       132 -~----~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                       .    ...............+.+++.+||+.||++|||++++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         262 TPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             CcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence             0    000000122345668999999999999999999999986


No 285
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=99.92  E-value=5.2e-25  Score=168.80  Aligned_cols=147  Identities=27%  Similarity=0.391  Sum_probs=112.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|+.+||..+   ++|+||+|+||+++.++.++|+|||.+........   .....++..|++||.+.+..++
T Consensus       102 ~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~  175 (253)
T cd05122         102 YVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYD  175 (253)
T ss_pred             HHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc---ccceecCCcccCHHHHcCCCCC
Confidence            47889999999999988   99999999999999999999999998875433221   2334567889999998888888


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCC--CHHHHHHHHHHHHhhcCcC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRY--PRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~  159 (213)
                      .+.|+|++|++++++++|..||.......                ....... ......  +..+...+.+++.+||..+
T Consensus       176 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~----------------~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~  238 (253)
T cd05122         176 YKADIWSLGITAIELAEGKPPYSELPPMK----------------ALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKN  238 (253)
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCCchHH----------------HHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCC
Confidence            99999999999999999999986322110                0000000 111111  1223567999999999999


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      |++|||+.++++
T Consensus       239 p~~R~t~~~~l~  250 (253)
T cd05122         239 PEKRPTAEQLLK  250 (253)
T ss_pred             hhhCCCHHHHhc
Confidence            999999999875


No 286
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92  E-value=2.5e-25  Score=196.43  Aligned_cols=147  Identities=14%  Similarity=0.206  Sum_probs=100.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC-------------------ceEEeeeecccccCCCCCC-----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF-------------------NPKLSDFGLAKLGPVGDNT-----   57 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~-------------------~~~l~d~~~~~~~~~~~~~-----   57 (213)
                      .+++||++||+|||+++   |+||||||+|||++..+                   .+|++|||+++........     
T Consensus        84 ~i~~qi~~al~~lH~~g---IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~  160 (793)
T PLN00181         84 HVFRQIVEIVNAAHSQG---IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKL  160 (793)
T ss_pred             HHHHHHHHHHHHHHhCC---eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhh
Confidence            57899999999999998   99999999999996544                   4555666655431100000     


Q ss_pred             ---------cccccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhh
Q 028134           58 ---------HVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKF  128 (213)
Q Consensus        58 ---------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (213)
                               .......++..|+|||.+.+..++.++|||||||++|||++|..|+.....     .       .   ..+
T Consensus       161 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-----~-------~---~~~  225 (793)
T PLN00181        161 EEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-----T-------M---SSL  225 (793)
T ss_pred             hccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-----H-------H---HHH
Confidence                     000113467889999999988999999999999999999998877541100     0       0   000


Q ss_pred             h-hhcccccCCCCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          129 V-HLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       129 ~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      . ..+.+.     ..........++..||+.+|.+||++.||++
T Consensus       226 ~~~~~~~~-----~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        226 RHRVLPPQ-----ILLNWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             HHhhcChh-----hhhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence            0 011110     0112234567888999999999999999975


No 287
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.92  E-value=8.8e-25  Score=171.39  Aligned_cols=149  Identities=28%  Similarity=0.430  Sum_probs=111.0

Q ss_pred             hhHHHHHHHHHHhhc-CCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCC-
Q 028134            2 KIAVGAARGLEYLHC-KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~-~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-   79 (213)
                      +++.|++.||.|||+ .+   ++|+||+|+||+++.++.++|+|||.+......    ......++..|++||.+.+.. 
T Consensus       106 ~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~  178 (286)
T cd06622         106 RITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS----LAKTNIGCQSYMAPERIKSGGP  178 (286)
T ss_pred             HHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCC----ccccCCCccCccCcchhcCCCC
Confidence            578899999999996 46   999999999999999999999999988653221    112234667899999875443 


Q ss_pred             -----CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHh
Q 028134           80 -----LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM  154 (213)
Q Consensus        80 -----~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  154 (213)
                           ++.++|+||+||++|++++|..||........             ...+..+.+. .....+..+...+.+++..
T Consensus       179 ~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~~~~~~li~~  244 (286)
T cd06622         179 NQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI-------------FAQLSAIVDG-DPPTLPSGYSDDAQDFVAK  244 (286)
T ss_pred             CccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH-------------HHHHHHHhhc-CCCCCCcccCHHHHHHHHH
Confidence                 47889999999999999999999853211110             0111111111 1223344577889999999


Q ss_pred             hcCcCCCCCCCHHHHHH
Q 028134          155 CLNEEANFRPLINDIVV  171 (213)
Q Consensus       155 cl~~~p~~Rps~~ev~~  171 (213)
                      ||..+|++||++.+++.
T Consensus       245 ~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         245 CLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             HcccCcccCCCHHHHhc
Confidence            99999999999999986


No 288
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.92  E-value=5.6e-25  Score=170.22  Aligned_cols=151  Identities=24%  Similarity=0.362  Sum_probs=115.3

Q ss_pred             hhHHHHHHHHHHhhc-CCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHC-KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~-~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|+++|++|||+ .+   ++|+||+|+||+++.++.++|+|||.+........  ......++..|++||......+
T Consensus       103 ~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~pE~~~~~~~  177 (264)
T cd06623         103 YIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD--QCNTFVGTVTYMSPERIQGESY  177 (264)
T ss_pred             HHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCCC--cccceeecccccCHhhhCCCCC
Confidence            578999999999999 88   99999999999999999999999998875422221  1123456778999999888888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHH-HHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRR-CLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~~  159 (213)
                      +.++|+|+||+++|++++|..||.........             .....+. .......+.. ++..+.+++..||..+
T Consensus       178 ~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~-------------~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~  243 (264)
T cd06623         178 SYAADIWSLGLTLLECALGKFPFLPPGQPSFF-------------ELMQAIC-DGPPPSLPAEEFSPEFRDFISACLQKD  243 (264)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCccccccCHH-------------HHHHHHh-cCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            99999999999999999999998644321110             0111111 1111222333 6678999999999999


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      |++||++.++++
T Consensus       244 p~~R~~~~~ll~  255 (264)
T cd06623         244 PKKRPSAAELLQ  255 (264)
T ss_pred             hhhCCCHHHHHh
Confidence            999999999987


No 289
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.92  E-value=3.6e-25  Score=171.16  Aligned_cols=151  Identities=28%  Similarity=0.407  Sum_probs=112.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC------cccccccccccccCcccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT------HVSTRVMGTYGYCAPEYA   75 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~Pe~~   75 (213)
                      +++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||++.........      .......++..|++||..
T Consensus        97 ~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~  173 (265)
T cd05579          97 IYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVI  173 (265)
T ss_pred             HHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHh
Confidence            57899999999999998   999999999999999999999999988753322110      112234467789999998


Q ss_pred             ccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHH--HHHHHHHHHH
Q 028134           76 MSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRR--CLNYAVAVTA  153 (213)
Q Consensus        76 ~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~  153 (213)
                      .....+.+.|+|+||++++++++|..||......                ..........  ...+..  ....+.+++.
T Consensus       174 ~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~----------------~~~~~~~~~~--~~~~~~~~~~~~~~~~i~  235 (265)
T cd05579         174 LGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE----------------EIFQNILNGK--IEWPEDVEVSDEAIDLIS  235 (265)
T ss_pred             cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH----------------HHHHHHhcCC--cCCCccccCCHHHHHHHH
Confidence            8888889999999999999999999998632211                0011111111  111222  2678899999


Q ss_pred             hhcCcCCCCCCCHHHHHHHH
Q 028134          154 MCLNEEANFRPLINDIVVAL  173 (213)
Q Consensus       154 ~cl~~~p~~Rps~~ev~~~L  173 (213)
                      .||+.+|++||++.++.+.|
T Consensus       236 ~~l~~~p~~Rpt~~~~~~~l  255 (265)
T cd05579         236 KLLVPDPEKRLGAKSIEEIK  255 (265)
T ss_pred             HHhcCCHhhcCCCccHHHHh
Confidence            99999999999995555444


No 290
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.92  E-value=1.5e-25  Score=179.86  Aligned_cols=169  Identities=23%  Similarity=0.307  Sum_probs=114.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC-cccccccccccccCcccccc-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT-HVSTRVMGTYGYCAPEYAMS-GK   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~-~~   79 (213)
                      .++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||++......... .......++..|++||.+.+ ..
T Consensus       110 ~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  186 (336)
T cd07849         110 YFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKG  186 (336)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCC
Confidence            46889999999999998   999999999999999999999999998754322111 11122456788999998654 46


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh--hhhhhhhhccccc---------CCCC-----CHH
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK--DQKKFVHLVDPLL---------HGRY-----PRR  143 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---------~~~~-----~~~  143 (213)
                      ++.++|+||+|+++|+|++|..||.........   ........  .......+.+...         ....     ...
T Consensus       187 ~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (336)
T cd07849         187 YTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQL---NLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPN  263 (336)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcc
Confidence            788999999999999999999999643211100   00000000  0011111111000         0000     112


Q ss_pred             HHHHHHHHHHhhcCcCCCCCCCHHHHHHH--HHHH
Q 028134          144 CLNYAVAVTAMCLNEEANFRPLINDIVVA--LDYL  176 (213)
Q Consensus       144 ~~~~~~~li~~cl~~~p~~Rps~~ev~~~--L~~l  176 (213)
                      ....+.+++.+||+.+|++||++.++++.  |+..
T Consensus       264 ~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         264 ADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             cCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence            35678999999999999999999999874  4444


No 291
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.92  E-value=7.6e-25  Score=171.20  Aligned_cols=162  Identities=20%  Similarity=0.227  Sum_probs=113.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      .++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||.+.......  .......++..|++||.+.+. .+
T Consensus       102 ~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~  176 (283)
T cd05118         102 SYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RPYTHYVVTRWYRAPELLLGDKGY  176 (283)
T ss_pred             HHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--ccccCccCcccccCcHHHhcCCCC
Confidence            57899999999999998   9999999999999999999999999887543222  112224467789999988766 67


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhh--hhhhhhhc-----------ccc--cCCCCCHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKD--QKKFVHLV-----------DPL--LHGRYPRRCL  145 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----------~~~--~~~~~~~~~~  145 (213)
                      +.++|+||+|+++|++++|..||.............   .....  ........           +..  .........+
T Consensus       177 ~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (283)
T cd05118         177 STPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIF---RTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNAS  253 (283)
T ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---HHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhC
Confidence            899999999999999999999986433211100000   00000  00000000           000  0001123456


Q ss_pred             HHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          146 NYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       146 ~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ..+.++|..||+.+|.+||++.+++.
T Consensus       254 ~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         254 PQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             HHHHHHHHHHhccCcccCcCHHHHhh
Confidence            78999999999999999999999975


No 292
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.92  E-value=5.3e-25  Score=171.82  Aligned_cols=148  Identities=29%  Similarity=0.370  Sum_probs=111.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.|+.|||+.+   ++|+||+|+||+++.++.++++|||.+.......  .......++..|++||.+.+ ..+
T Consensus       105 ~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  179 (277)
T cd06917         105 VIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS--SKRSTFVGTPYWMAPEVITEGKYY  179 (277)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCCc--cccccccCCcceeCHHHhccCCcc
Confidence            47889999999999998   9999999999999999999999999887643322  11223457778999998764 346


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCH-HHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPR-RCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~cl~~~  159 (213)
                      +.++|+||+|+++|+|++|..||........                .. .+.......++. .....+.+++..||..+
T Consensus       180 ~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~----------------~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  242 (277)
T cd06917         180 DTKADIWSLGITIYEMATGNPPYSDVDAFRA----------------MM-LIPKSKPPRLEDNGYSKLLREFVAACLDEE  242 (277)
T ss_pred             ccchhHHHHHHHHHHHHhCCCCCCCCChhhh----------------hh-ccccCCCCCCCcccCCHHHHHHHHHHcCCC
Confidence            8899999999999999999999963221110                00 000001111111 25567899999999999


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      |++||++.+++.
T Consensus       243 p~~R~~~~~il~  254 (277)
T cd06917         243 PKERLSAEELLK  254 (277)
T ss_pred             cccCcCHHHHhh
Confidence            999999999986


No 293
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.92  E-value=1.8e-24  Score=173.26  Aligned_cols=151  Identities=20%  Similarity=0.245  Sum_probs=108.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS----   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~----   77 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++........ .......++..|+|||.+.+    
T Consensus       106 ~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~  181 (331)
T cd05624         106 FYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT-VQSSVAVGTPDYISPEILQAMEDG  181 (331)
T ss_pred             HHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCCc-eeeccccCCcccCCHHHHhccccC
Confidence            46789999999999998   99999999999999999999999999865422211 11223468899999998865    


Q ss_pred             -CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCC---HHHHHHHHHHHH
Q 028134           78 -GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYP---RRCLNYAVAVTA  153 (213)
Q Consensus        78 -~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~  153 (213)
                       ..++.++|+||+|+++|+|++|..||......                .....+.....+..++   ......+.+++.
T Consensus       182 ~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~----------------~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~  245 (331)
T cd05624         182 MGKYGPECDWWSLGVCMYEMLYGETPFYAESLV----------------ETYGKIMNHEERFQFPSHITDVSEEAKDLIQ  245 (331)
T ss_pred             CCCCCCcccEEeeehhhhhhhhCCCCccCCCHH----------------HHHHHHHcCCCcccCCCccccCCHHHHHHHH
Confidence             45778999999999999999999999632111                0111111111111111   234567889999


Q ss_pred             hhcCcCCCC--CCCHHHHHHH
Q 028134          154 MCLNEEANF--RPLINDIVVA  172 (213)
Q Consensus       154 ~cl~~~p~~--Rps~~ev~~~  172 (213)
                      +|+...+.+  |++++++++.
T Consensus       246 ~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         246 RLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             HHccCchhhcCCCCHHHHhcC
Confidence            998866554  4688888753


No 294
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.92  E-value=7.5e-25  Score=191.96  Aligned_cols=150  Identities=23%  Similarity=0.285  Sum_probs=108.2

Q ss_pred             hhHHHHHHHHHHhhcCCC----CCeEecCCCCCceeeCC-----------------CCceEEeeeecccccCCCCCCccc
Q 028134            2 KIAVGAARGLEYLHCKAN----PPVIYRDLKSANILLDN-----------------DFNPKLSDFGLAKLGPVGDNTHVS   60 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~----~~~vH~dl~~~nil~~~-----------------~~~~~l~d~~~~~~~~~~~~~~~~   60 (213)
                      .|+.||+.||.|||+.+.    .+|+|+||||+|||++.                 .+.++|+|||++......   ...
T Consensus       122 ~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~---s~~  198 (1021)
T PTZ00266        122 DITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIE---SMA  198 (1021)
T ss_pred             HHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccc---ccc
Confidence            578999999999998431    23999999999999953                 245899999998753221   112


Q ss_pred             ccccccccccCcccccc--CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCC
Q 028134           61 TRVMGTYGYCAPEYAMS--GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG  138 (213)
Q Consensus        61 ~~~~~~~~~~~Pe~~~~--~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (213)
                      ....++..|+|||.+.+  ..++.++|||||||++|+|++|..||......                ..+...+......
T Consensus       199 ~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~----------------~qli~~lk~~p~l  262 (1021)
T PTZ00266        199 HSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNF----------------SQLISELKRGPDL  262 (1021)
T ss_pred             cccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcH----------------HHHHHHHhcCCCC
Confidence            33467899999998864  34788999999999999999999999632211                0111111111100


Q ss_pred             CCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          139 RYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       139 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      . .......+.+||..||..+|.+||++.++++
T Consensus       263 p-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        263 P-IKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             C-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            0 1234567899999999999999999999985


No 295
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.92  E-value=4.4e-25  Score=172.87  Aligned_cols=165  Identities=23%  Similarity=0.282  Sum_probs=111.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      +++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||++........  ......++..|++||.+.+ ..+
T Consensus       104 ~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~  178 (286)
T cd07847         104 KIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQY  178 (286)
T ss_pred             HHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCcc--cccCcccccccCCHHHHhCCCCc
Confidence            57899999999999998   99999999999999999999999999875432221  1122346778999998775 457


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhh-chhhhhhhhh------hh-hhhcccccCCCC-----CHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS-WSRPFLKDQK------KF-VHLVDPLLHGRY-----PRRCLNY  147 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~------~~-~~~~~~~~~~~~-----~~~~~~~  147 (213)
                      +.++|+||+|+++|+|++|..||............. ..........      .. .....+......     .......
T Consensus       179 ~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (286)
T cd07847         179 GPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSP  258 (286)
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHH
Confidence            889999999999999999999996433221110000 0000000000      00 000000000000     0123567


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      +.+++.+||+.+|++||++.+++.
T Consensus       259 ~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         259 ALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             HHHHHHHHhcCCccccCCHHHHhc
Confidence            889999999999999999999874


No 296
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.92  E-value=4.5e-25  Score=172.49  Aligned_cols=160  Identities=18%  Similarity=0.195  Sum_probs=110.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.||+|||+++   ++|+||+|+||+++. +.++|+|||++........   .....++..|++||.... ..+
T Consensus       104 ~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~  176 (282)
T cd07831         104 SYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP---YTEYISTRWYRAPECLLTDGYY  176 (282)
T ss_pred             HHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCCC---cCCCCCCcccCChhHhhcCCCC
Confidence            57899999999999998   999999999999999 9999999999875422211   122346778999997654 456


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhh-hhhhhhhcccc----------cCC---CCCHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKD-QKKFVHLVDPL----------LHG---RYPRRCLN  146 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~---~~~~~~~~  146 (213)
                      +.++|+||+||++|+|++|..||........   +......... ...+.......          ...   ......+.
T Consensus       177 ~~~~Di~slGv~l~el~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (282)
T cd07831         177 GPKMDIWAVGCVFFEILSLFPLFPGTNELDQ---IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASA  253 (282)
T ss_pred             CcchhHHHHHHHHHHHHcCCcCCCCCCHHHH---HHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccH
Confidence            8899999999999999999999964332110   1100000000 00000000000          000   01123467


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+.+++.+||+.+|++||++.++++
T Consensus       254 ~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         254 EGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HHHHHHHHHhccCcccccCHHHHhh
Confidence            8999999999999999999999975


No 297
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.92  E-value=4.9e-25  Score=170.00  Aligned_cols=148  Identities=28%  Similarity=0.382  Sum_probs=112.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCC-C
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~   80 (213)
                      .++.|++.|++|||+.+   ++|+||+|+||+++.++.++|+|||++.......   ......++..|++||...... +
T Consensus       106 ~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~  179 (258)
T cd06632         106 LYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGY  179 (258)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCCC
Confidence            46889999999999998   9999999999999999999999999876532221   123345678899999887665 8


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||+|+++|++++|..||.......                ..............+..+...+.+++.+||+.+|
T Consensus       180 ~~~~D~~slG~~l~~l~~g~~pf~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  243 (258)
T cd06632         180 GLAADIWSLGCTVLEMATGKPPWSQLEGVA----------------AVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDP  243 (258)
T ss_pred             CchhhhHHHHHHHHHHHhCCCCcccCcHHH----------------HHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCc
Confidence            899999999999999999999986332110                0000111011122334456778999999999999


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      ++||++.+++.
T Consensus       244 ~~Rp~~~~~l~  254 (258)
T cd06632         244 SLRPTAAELLE  254 (258)
T ss_pred             ccCcCHHHHhc
Confidence            99999999874


No 298
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.92  E-value=6.1e-25  Score=171.80  Aligned_cols=149  Identities=25%  Similarity=0.340  Sum_probs=110.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc-----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-----   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-----   76 (213)
                      +++.|++.|+.|||+++   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||.+.     
T Consensus       107 ~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~  181 (280)
T cd06611         107 YVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL--QKRDTFIGTPYWMAPEVVACETFK  181 (280)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc--cccceeecchhhcCHHHHhhcccC
Confidence            57899999999999998   9999999999999999999999999876432211  1122345678899999875     


Q ss_pred             cCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccc-cCCCCCHHHHHHHHHHHHhh
Q 028134           77 SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL-LHGRYPRRCLNYAVAVTAMC  155 (213)
Q Consensus        77 ~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~c  155 (213)
                      ...++.++|+||+|+++|++++|..||.......                ....+.... .....+..+...+.+++..|
T Consensus       182 ~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  245 (280)
T cd06611         182 DNPYDYKADIWSLGITLIELAQMEPPHHELNPMR----------------VLLKILKSEPPTLDQPSKWSSSFNDFLKSC  245 (280)
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH----------------HHHHHhcCCCCCcCCcccCCHHHHHHHHHH
Confidence            3346778999999999999999999986322110                000111100 01112334556789999999


Q ss_pred             cCcCCCCCCCHHHHHH
Q 028134          156 LNEEANFRPLINDIVV  171 (213)
Q Consensus       156 l~~~p~~Rps~~ev~~  171 (213)
                      |+.+|.+||++.++++
T Consensus       246 l~~~p~~Rps~~~il~  261 (280)
T cd06611         246 LVKDPDDRPTAAELLK  261 (280)
T ss_pred             hccChhhCcCHHHHhc
Confidence            9999999999999976


No 299
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.92  E-value=1.2e-24  Score=168.42  Aligned_cols=151  Identities=28%  Similarity=0.395  Sum_probs=111.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcc--cccccccccccCccccccCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV--STRVMGTYGYCAPEYAMSGK   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~Pe~~~~~~   79 (213)
                      +++.|++.|+.|||+.+   ++|+||+++||+++.++.++|+|||++...........  .....++..|++||.+.+..
T Consensus       103 ~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~  179 (264)
T cd06626         103 VYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGK  179 (264)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCC
Confidence            47899999999999998   99999999999999999999999999876433222111  11234677899999987665


Q ss_pred             ---CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCH--HHHHHHHHHHHh
Q 028134           80 ---LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPR--RCLNYAVAVTAM  154 (213)
Q Consensus        80 ---~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~  154 (213)
                         .+.++|+|++|++++++++|..||.......                .....+........+.  .....+.+++..
T Consensus       180 ~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  243 (264)
T cd06626         180 GKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF----------------QIMFHVGAGHKPPIPDSLQLSPEGKDFLDR  243 (264)
T ss_pred             CCCCCcccchHHHHHHHHHHHhCCCCccCCcchH----------------HHHHHHhcCCCCCCCcccccCHHHHHHHHH
Confidence               7889999999999999999999996322110                0000000011111222  236678899999


Q ss_pred             hcCcCCCCCCCHHHHHH
Q 028134          155 CLNEEANFRPLINDIVV  171 (213)
Q Consensus       155 cl~~~p~~Rps~~ev~~  171 (213)
                      ||+.+|++||++.+++.
T Consensus       244 ~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         244 CLESDPKKRPTASELLQ  260 (264)
T ss_pred             HccCCcccCCCHHHHhc
Confidence            99999999999999874


No 300
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.92  E-value=3.9e-25  Score=176.84  Aligned_cols=178  Identities=25%  Similarity=0.268  Sum_probs=121.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC-cccccccccccccCccccccC-C
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT-HVSTRVMGTYGYCAPEYAMSG-K   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~~-~   79 (213)
                      .++.|++.||+|||+.+   ++|+||||.||+++.++.++|+|||.+......... .......++..|++||.+.+. .
T Consensus       107 ~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  183 (330)
T cd07834         107 YFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSR  183 (330)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccC
Confidence            47899999999999998   999999999999999999999999998764332210 112234567789999998877 7


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhh-------hhhhhhhhhcc---ccc---CCCCCHHHHH
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFL-------KDQKKFVHLVD---PLL---HGRYPRRCLN  146 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~---~~~---~~~~~~~~~~  146 (213)
                      ++.++|+||+|+++|+|++|..||...........+.......       .........+.   ...   ..........
T Consensus       184 ~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (330)
T cd07834         184 YTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASP  263 (330)
T ss_pred             CCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCH
Confidence            8899999999999999999999996443211100000000000       00000000111   000   0001122456


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHH--HHHHHhhccCC
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVV--ALDYLVSQRDS  182 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~--~L~~l~~~~~~  182 (213)
                      .+.+++.+||+.+|.+||++.+++.  .|+.+......
T Consensus       264 ~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~  301 (330)
T cd07834         264 EAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDE  301 (330)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccC
Confidence            7899999999999999999999998  46666665443


No 301
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=99.92  E-value=3.4e-25  Score=173.53  Aligned_cols=163  Identities=23%  Similarity=0.255  Sum_probs=109.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCC-C
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~   80 (213)
                      +++.|++.|++|||+.+   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||...+.. +
T Consensus       104 ~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  178 (284)
T cd07860         104 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYY  178 (284)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCc--cccccccccccccCCeEEecCCCC
Confidence            57889999999999998   9999999999999999999999999986532211  1112234567899999876544 5


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhh----------hhhhhhcccccCC---CCCHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQ----------KKFVHLVDPLLHG---RYPRRCLNY  147 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~---~~~~~~~~~  147 (213)
                      +.++|+||||+++|++++|..||........  ............          ......+......   .........
T Consensus       179 ~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (284)
T cd07860         179 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDED  256 (284)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHH
Confidence            7889999999999999999999864322111  000000000000          0000000000000   001123456


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      +.++|.+||+.||.+||++++++.
T Consensus       257 ~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         257 GRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHHHHHHhcCCCcccCCCHHHHhc
Confidence            789999999999999999999974


No 302
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.92  E-value=4.7e-25  Score=191.47  Aligned_cols=149  Identities=28%  Similarity=0.387  Sum_probs=107.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCC----------------CCCCcccccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPV----------------GDNTHVSTRVMG   65 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~----------------~~~~~~~~~~~~   65 (213)
                      +++++|++||+|+|+.|   ++||||||.|||++.++.+||+|||++.....                +..........|
T Consensus       701 rLFreIlEGLaYIH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VG  777 (1351)
T KOG1035|consen  701 RLFREILEGLAYIHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVG  777 (1351)
T ss_pred             HHHHHHHHHHHHHHhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccc
Confidence            57899999999999999   99999999999999999999999999976210                011112345789


Q ss_pred             cccccCccccccC---CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCC--C
Q 028134           66 TYGYCAPEYAMSG---KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR--Y  140 (213)
Q Consensus        66 ~~~~~~Pe~~~~~---~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  140 (213)
                      |.-|.|||.+.+.   +|+.+.|+||||+|++||+.   ||....+.               -..+..+-+..+...  +
T Consensus       778 TalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMER---------------a~iL~~LR~g~iP~~~~f  839 (1351)
T KOG1035|consen  778 TALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMER---------------ASILTNLRKGSIPEPADF  839 (1351)
T ss_pred             eeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHH---------------HHHHHhcccCCCCCCccc
Confidence            9999999988754   48999999999999999985   34311100               011111111111111  1


Q ss_pred             CHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          141 PRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       141 ~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .....+.-..+|++|++.||.+|||+.|+++
T Consensus       840 ~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  840 FDPEHPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             ccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence            2233344578999999999999999999875


No 303
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.92  E-value=9.1e-25  Score=172.29  Aligned_cols=150  Identities=27%  Similarity=0.390  Sum_probs=109.7

Q ss_pred             hhHHHHHHHHHHhhc-CCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCC-
Q 028134            2 KIAVGAARGLEYLHC-KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~-~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-   79 (213)
                      +++.|++.|++|||+ .+   ++|+||+|+||+++.++.++|+|||++........   .....++..|++||.+.+.. 
T Consensus       118 ~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~  191 (296)
T cd06618         118 KMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA---KTRSAGCAAYMAPERIDPPDP  191 (296)
T ss_pred             HHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccCCCc---ccCCCCCccccCHhhcCCCCC
Confidence            578999999999997 46   99999999999999999999999999865322111   12234567899999887543 


Q ss_pred             ---CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccC-CCCCHHHHHHHHHHHHhh
Q 028134           80 ---LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLH-GRYPRRCLNYAVAVTAMC  155 (213)
Q Consensus        80 ---~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~c  155 (213)
                         ++.++|+||||+++|+|++|..||......               ......++..... ......+...+.+++.+|
T Consensus       192 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  256 (296)
T cd06618         192 NPKYDIRADVWSLGISLVELATGQFPYKNCKTE---------------FEVLTKILQEEPPSLPPNEGFSPDFCSFVDLC  256 (296)
T ss_pred             ccccccchhHHHHHHHHHHHHhCCCCCCcchhH---------------HHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHH
Confidence               678999999999999999999998632111               0011111111110 011113456789999999


Q ss_pred             cCcCCCCCCCHHHHHHH
Q 028134          156 LNEEANFRPLINDIVVA  172 (213)
Q Consensus       156 l~~~p~~Rps~~ev~~~  172 (213)
                      |+.+|++||++.+++..
T Consensus       257 l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         257 LTKDHRKRPKYRELLQH  273 (296)
T ss_pred             ccCChhhCCCHHHHhcC
Confidence            99999999999999863


No 304
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.92  E-value=3.1e-25  Score=175.90  Aligned_cols=145  Identities=29%  Similarity=0.386  Sum_probs=116.3

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL   82 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~   82 (213)
                      ++.+|+-||.+||..+   ||+||+||+|||+|..|.++|+|+|++..++.+.   ......||..|||||++.+..|+.
T Consensus       292 YAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~---~~~~rvGT~GYMAPEvl~ne~Y~~  365 (591)
T KOG0986|consen  292 YAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK---PIRGRVGTVGYMAPEVLQNEVYDF  365 (591)
T ss_pred             HHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCCCC---ccccccCcccccCHHHHcCCcccC
Confidence            5789999999999998   9999999999999999999999999998754432   223347999999999999999999


Q ss_pred             ccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCCC
Q 028134           83 KSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANF  162 (213)
Q Consensus        83 ~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  162 (213)
                      ..|.|++||++|||+.|+.||....+....             .++.+.+.. ....+++...++..+++...|+.||.+
T Consensus       366 s~Dwf~lGCllYemi~G~sPFr~~KeKvk~-------------eEvdrr~~~-~~~ey~~kFS~eakslc~~LL~Kdp~~  431 (591)
T KOG0986|consen  366 SPDWFSLGCLLYEMIAGHSPFRQRKEKVKR-------------EEVDRRTLE-DPEEYSDKFSEEAKSLCEGLLTKDPEK  431 (591)
T ss_pred             CccHHHHHhHHHHHHcccCchhhhhhhhhH-------------HHHHHHHhc-chhhcccccCHHHHHHHHHHHccCHHH
Confidence            999999999999999999999754444321             111111111 123456778888999999999999999


Q ss_pred             CCCHH
Q 028134          163 RPLIN  167 (213)
Q Consensus       163 Rps~~  167 (213)
                      |-...
T Consensus       432 RLGcr  436 (591)
T KOG0986|consen  432 RLGCR  436 (591)
T ss_pred             hccCC
Confidence            96544


No 305
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.92  E-value=8.1e-25  Score=173.77  Aligned_cols=167  Identities=23%  Similarity=0.259  Sum_probs=111.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC----CCceEEeeeecccccCCCCCC-cccccccccccccCccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN----DFNPKLSDFGLAKLGPVGDNT-HVSTRVMGTYGYCAPEYAM   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~----~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~   76 (213)
                      .++.|++.||.|||+++   ++|+||+|+||+++.    ++.++++|||++......... .......++..|+|||.+.
T Consensus       112 ~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  188 (316)
T cd07842         112 SLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLL  188 (316)
T ss_pred             HHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHh
Confidence            47889999999999998   999999999999998    899999999998754332221 1112234677899999876


Q ss_pred             cC-CCCCccceeeHHHHHHHHHhCCCCccccCCCCccch------hhchhhhhh-----------hhhhhhhhcccccCC
Q 028134           77 SG-KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNL------VSWSRPFLK-----------DQKKFVHLVDPLLHG  138 (213)
Q Consensus        77 ~~-~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~------~~~~~~~~~-----------~~~~~~~~~~~~~~~  138 (213)
                      +. .++.++|+||||+++++|++|..||...........      .......+.           .........+.....
T Consensus       189 ~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (316)
T cd07842         189 GARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTK  268 (316)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCC
Confidence            54 578899999999999999999999975433321000      000000000           000000000000011


Q ss_pred             CCC-----H------HHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          139 RYP-----R------RCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       139 ~~~-----~------~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .++     .      .....+.+++.+||+.+|++|||+.|+++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         269 TYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             CCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            111     0      23456889999999999999999999974


No 306
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.92  E-value=5e-25  Score=170.44  Aligned_cols=148  Identities=25%  Similarity=0.318  Sum_probs=110.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++.....      .....++..|++||...+..++
T Consensus       101 ~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~  171 (260)
T cd05611         101 QYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------NKKFVGTPDYLAPETILGVGDD  171 (260)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc------cccCCCCcCccChhhhcCCCCc
Confidence            57899999999999998   99999999999999999999999998764321      2223467789999998877788


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++|++++|..||.......   ..       .   .... ............++..+.+++.+||+.+|+
T Consensus       172 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~-------~---~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  237 (260)
T cd05611         172 KMSDWWSLGCVIFEFLFGYPPFHAETPDA---VF-------D---NILS-RRINWPEEVKEFCSPEAVDLINRLLCMDPA  237 (260)
T ss_pred             chhhhHHHHHHHHHHHHCCCCCCCCCHHH---HH-------H---HHHh-cccCCCCcccccCCHHHHHHHHHHccCCHH
Confidence            99999999999999999999996322110   00       0   0000 000011112234567899999999999999


Q ss_pred             CCCCHHHHHHH
Q 028134          162 FRPLINDIVVA  172 (213)
Q Consensus       162 ~Rps~~ev~~~  172 (213)
                      +||++..+.+.
T Consensus       238 ~R~~~~~~~~~  248 (260)
T cd05611         238 KRLGANGYQEI  248 (260)
T ss_pred             HccCCCcHHHH
Confidence            99977655443


No 307
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.92  E-value=4.6e-25  Score=172.83  Aligned_cols=165  Identities=23%  Similarity=0.331  Sum_probs=111.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.|++|||+.+   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||.+.+ ..+
T Consensus       104 ~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  178 (286)
T cd07846         104 KYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--EVYTDYVATRWYRAPELLVGDTKY  178 (286)
T ss_pred             HHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc--cccCcccceeeccCcHHhcccccc
Confidence            57899999999999998   9999999999999999999999999987542222  11222456788999998765 346


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhh-chhhhhhhhhhh---hhhc----ccccCC-----CCCHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS-WSRPFLKDQKKF---VHLV----DPLLHG-----RYPRRCLNY  147 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~----~~~~~~-----~~~~~~~~~  147 (213)
                      +.++|+||+|+++|++++|..||............. ............   ..+.    .+....     .........
T Consensus       179 ~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (286)
T cd07846         179 GRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGL  258 (286)
T ss_pred             CchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHH
Confidence            788999999999999999998886432211100000 000000000000   0000    000000     001234567


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      +.+++.+||..+|++||++.++++
T Consensus       259 ~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         259 VLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HHHHHHHHhcCCcccchhHHHHhc
Confidence            999999999999999999999875


No 308
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.92  E-value=1.2e-24  Score=171.59  Aligned_cols=165  Identities=22%  Similarity=0.211  Sum_probs=110.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      +++.||++||.|||+++   ++|+||+|+||+++.++.++|+|||++........  ......++..|++||.+.+ ..+
T Consensus       106 ~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~  180 (298)
T cd07841         106 SYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHY  180 (298)
T ss_pred             HHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccCCCc--cccccccceeeeCHHHHhCCCCC
Confidence            57899999999999998   99999999999999999999999999876433211  1122345678999998754 456


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchh-hchh----hhhhhhhhhhhhcccccCCC-----CCHHHHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV-SWSR----PFLKDQKKFVHLVDPLLHGR-----YPRRCLNYAVA  150 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  150 (213)
                      +.+.|+||+||+++++++|..+|............ ....    ....................     ........+.+
T Consensus       181 ~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (298)
T cd07841         181 GVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALD  260 (298)
T ss_pred             CcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHH
Confidence            88999999999999999997777533221110000 0000    00000000000000000001     11234567899


Q ss_pred             HHHhhcCcCCCCCCCHHHHHH
Q 028134          151 VTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       151 li~~cl~~~p~~Rps~~ev~~  171 (213)
                      +|.+||..+|++||+++|++.
T Consensus       261 li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         261 LLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             HHHHHhcCCcccCcCHHHHhh
Confidence            999999999999999999985


No 309
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.92  E-value=5.5e-25  Score=172.95  Aligned_cols=163  Identities=23%  Similarity=0.284  Sum_probs=107.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........  ......++..|++||...+ ..+
T Consensus       107 ~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~  181 (291)
T cd07844         107 LFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPSK--TYSNEVVTLWYRPPDVLLGSTEY  181 (291)
T ss_pred             HHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCCc--cccccccccccCCcHHhhcCccc
Confidence            46789999999999998   99999999999999999999999998764321111  1112235678999998765 457


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh--hhhhhhhh------cccc--------cCCCCC-HH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK--DQKKFVHL------VDPL--------LHGRYP-RR  143 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------~~~~--------~~~~~~-~~  143 (213)
                      +.++|+||+|+++|+|++|..||.........  .........  ........      ....        .....+ ..
T Consensus       182 ~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (291)
T cd07844         182 STSLDMWGVGCIFYEMATGRPLFPGSTDVEDQ--LHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLD  259 (291)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCccHHHH--HHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCC
Confidence            88999999999999999999999643311100  000000000  00000000      0000        000000 01


Q ss_pred             HHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          144 CLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       144 ~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ....+.+++..||+.+|++||++.+++.
T Consensus       260 ~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         260 RIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             CchhHHHHHHHHhccCcccccCHHHHhc
Confidence            1256789999999999999999999874


No 310
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.92  E-value=6.2e-25  Score=169.40  Aligned_cols=148  Identities=24%  Similarity=0.320  Sum_probs=111.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC-ceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF-NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      .++.|++.|+.|||+.+   ++|+||+|+||+++.++ .++++|||.+.......  .......++..|++||...+..+
T Consensus       105 ~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~  179 (257)
T cd08225         105 SWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM--ELAYTCVGTPYYLSPEICQNRPY  179 (257)
T ss_pred             HHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc--ccccccCCCccccCHHHHcCCCC
Confidence            57889999999999998   99999999999998875 46999999887542211  11222356788999999888888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||+|++++++++|..||......                ........... ..........+.+++.+||..+|
T Consensus       180 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~----------------~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p  242 (257)
T cd08225         180 NNKTDIWSLGCVLYELCTLKHPFEGNNLH----------------QLVLKICQGYF-APISPNFSRDLRSLISQLFKVSP  242 (257)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCccHH----------------HHHHHHhcccC-CCCCCCCCHHHHHHHHHHhccCh
Confidence            99999999999999999999998522110                11111111111 11223445679999999999999


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      ++||++.++++
T Consensus       243 ~~Rpt~~~ll~  253 (257)
T cd08225         243 RDRPSITSILK  253 (257)
T ss_pred             hhCcCHHHHhh
Confidence            99999999975


No 311
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.92  E-value=2.2e-24  Score=174.09  Aligned_cols=148  Identities=25%  Similarity=0.251  Sum_probs=117.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC----CCceEEeeeecccccCCCCCCcccccccccccccCcccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN----DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~----~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   77 (213)
                      .++.|++.+++|||+.+   ++|||+||+|+|+..    ++.++++|||++.....   ........|++.|+|||++..
T Consensus       139 ~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~  212 (382)
T KOG0032|consen  139 GIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGG  212 (382)
T ss_pred             HHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC---CceEeeecCCccccCchhhcC
Confidence            47899999999999999   999999999999943    35799999999987533   334455789999999999998


Q ss_pred             CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccc--cCCCCCHHHHHHHHHHHHhh
Q 028134           78 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL--LHGRYPRRCLNYAVAVTAMC  155 (213)
Q Consensus        78 ~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~c  155 (213)
                      ..++...|+||+|+++|.|++|..||........                ...+....  +....-......+.++|..|
T Consensus       213 ~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~----------------~~~i~~~~~~f~~~~w~~is~~akd~i~~l  276 (382)
T KOG0032|consen  213 RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI----------------FLAILRGDFDFTSEPWDDISESAKDFIRKL  276 (382)
T ss_pred             CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH----------------HHHHHcCCCCCCCCCccccCHHHHHHHHHh
Confidence            9999999999999999999999999974332221                11222221  11122235577899999999


Q ss_pred             cCcCCCCCCCHHHHHH
Q 028134          156 LNEEANFRPLINDIVV  171 (213)
Q Consensus       156 l~~~p~~Rps~~ev~~  171 (213)
                      +..||.+|+++.++++
T Consensus       277 l~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  277 LEFDPRKRLTAAQALQ  292 (382)
T ss_pred             cccCcccCCCHHHHhc
Confidence            9999999999999997


No 312
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.91  E-value=1e-24  Score=170.44  Aligned_cols=149  Identities=28%  Similarity=0.387  Sum_probs=114.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.++.+||+++   ++|+||+|.||+++.++.++++|||++.......  .......++..|++||.+.+..++
T Consensus       105 ~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~  179 (277)
T cd06641         105 TILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYD  179 (277)
T ss_pred             HHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch--hhhccccCCccccChhhhccCCCC
Confidence            47889999999999998   9999999999999999999999999886542211  112223567789999998888888


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+||++|++++|..||......                 .....+........+..+...+.+++.+||+.+|.
T Consensus       180 ~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  242 (277)
T cd06641         180 SKADIWSLGITAIELAKGEPPHSELHPM-----------------KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS  242 (277)
T ss_pred             chhhHHHHHHHHHHHHcCCCCCCccchH-----------------HHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChh
Confidence            9999999999999999999998532111                 00111111112223445567789999999999999


Q ss_pred             CCCCHHHHHHH
Q 028134          162 FRPLINDIVVA  172 (213)
Q Consensus       162 ~Rps~~ev~~~  172 (213)
                      +||++.++++.
T Consensus       243 ~Rp~~~~~l~~  253 (277)
T cd06641         243 FRPTAKELLKH  253 (277)
T ss_pred             hCcCHHHHHhC
Confidence            99999999983


No 313
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=99.91  E-value=1.7e-24  Score=170.10  Aligned_cols=155  Identities=28%  Similarity=0.384  Sum_probs=113.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+.+   ++|+||+++||+++.++.++|+|||++.......    .....++..|++||.+.+..++
T Consensus       109 ~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~  181 (287)
T cd06621         109 KIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL----AGTFTGTSFYMAPERIQGKPYS  181 (287)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccccc----cccccCCccccCHHHhcCCCCC
Confidence            57899999999999998   9999999999999999999999999976432211    1123457789999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCC--CHHHHHHHHHHHHhhcCcC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRY--PRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~  159 (213)
                      .+.|+|++|+++|+|++|..||......... ..+.. ...      .....+......  .......+.+++.+||..+
T Consensus       182 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  253 (287)
T cd06621         182 ITSDVWSLGLTLLEVAQNRFPFPPEGEPPLG-PIELL-SYI------VNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKD  253 (287)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCcccCCCCC-hHHHH-HHH------hcCCchhhccCCCCCCchHHHHHHHHHHHcCCC
Confidence            9999999999999999999999744321110 00000 000      000000011000  1234567899999999999


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      |.+|||+.|+++
T Consensus       254 p~~Rpt~~eil~  265 (287)
T cd06621         254 PTRRPTPWDMLE  265 (287)
T ss_pred             cccCCCHHHHHh
Confidence            999999999987


No 314
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.91  E-value=3.5e-25  Score=177.84  Aligned_cols=172  Identities=23%  Similarity=0.311  Sum_probs=116.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++.......  .......++..|++||.+.. ..+
T Consensus       112 ~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  186 (337)
T cd07858         112 YFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEY  186 (337)
T ss_pred             HHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccccccCCCc--ccccccccccCccChHHHhcCCCC
Confidence            57899999999999998   9999999999999999999999999987542221  11223356778999998764 467


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhch--------hhhhhhhhhhhhhccc---ccCC---CCCHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWS--------RPFLKDQKKFVHLVDP---LLHG---RYPRRCLN  146 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~  146 (213)
                      +.++|+||||+++|+|++|..||...............        ..... .......+..   ....   .....+..
T Consensus       187 ~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (337)
T cd07858         187 TTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIR-NEKARRYIRSLPYTPRQSFARLFPHANP  265 (337)
T ss_pred             CCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcC-chhhhHHHHhcCcccccCHHHHcccCCH
Confidence            89999999999999999999999643211100000000        00000 0000101100   0000   01123567


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHHH--HHHHhhc
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVVA--LDYLVSQ  179 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~~--L~~l~~~  179 (213)
                      .+.+++.+||+.+|++||+++++++.  |+.+...
T Consensus       266 ~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~  300 (337)
T cd07858         266 LAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP  300 (337)
T ss_pred             HHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence            78999999999999999999999975  6655443


No 315
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.91  E-value=5.9e-25  Score=176.14  Aligned_cols=164  Identities=23%  Similarity=0.279  Sum_probs=112.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC--cccccccccccccCcccccc-C
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT--HVSTRVMGTYGYCAPEYAMS-G   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~-~   78 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++.........  .......++..|++||...+ .
T Consensus       109 ~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  185 (332)
T cd07857         109 SFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQ  185 (332)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCC
Confidence            47899999999999998   999999999999999999999999998754322111  11123457888999998765 4


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh--hhhhhhh-----------hcccccCCC---CCH
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK--DQKKFVH-----------LVDPLLHGR---YPR  142 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----------~~~~~~~~~---~~~  142 (213)
                      .++.++|+||+|+++|++++|..||........   .........  .......           .........   ...
T Consensus       186 ~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (332)
T cd07857         186 SYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQ---LNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFP  262 (332)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHH---HHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCC
Confidence            678999999999999999999999864331110   000000000  0000000           000000000   111


Q ss_pred             HHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          143 RCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       143 ~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .....+.+++.+||+.+|.+||++.+++.
T Consensus       263 ~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         263 NANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             CCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            23567899999999999999999999975


No 316
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.91  E-value=9e-25  Score=171.12  Aligned_cols=164  Identities=20%  Similarity=0.245  Sum_probs=112.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+.+   ++|+||+++||+++.++.++|+|||.+........   .....++..|++||.+.+..++
T Consensus       111 ~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~  184 (287)
T cd07838         111 DLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYA  184 (287)
T ss_pred             HHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcceeccCCcc---cccccccccccChHHhccCCCC
Confidence            57899999999999998   99999999999999999999999999876422211   1123357789999999888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccc-hhhchh---hh-hh-hhhhhhhhcccccCCC---CCHHHHHHHHHHH
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQN-LVSWSR---PF-LK-DQKKFVHLVDPLLHGR---YPRRCLNYAVAVT  152 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~-~~~~~~---~~-~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~li  152 (213)
                      .++|+||+|+++|+|++|..||.......... +.....   .. .. ................   ........+.+++
T Consensus       185 ~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  264 (287)
T cd07838         185 TPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLL  264 (287)
T ss_pred             CcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHH
Confidence            99999999999999999998886433221100 000000   00 00 0000000000000000   1123456788999


Q ss_pred             HhhcCcCCCCCCCHHHHHH
Q 028134          153 AMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       153 ~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+||+.+|.+||++.++++
T Consensus       265 ~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         265 KKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             HHHhccCCccCCCHHHHhc
Confidence            9999999999999999874


No 317
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.91  E-value=4.2e-25  Score=174.89  Aligned_cols=167  Identities=23%  Similarity=0.230  Sum_probs=110.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC--cccccccccccccCccccccC-
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT--HVSTRVMGTYGYCAPEYAMSG-   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~-   78 (213)
                      +++.|++.||.|||+++   ++|+||+|+||+++.++.++|+|||++.........  .......++..|+|||.+.+. 
T Consensus       123 ~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  199 (310)
T cd07865         123 KVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGER  199 (310)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCc
Confidence            57899999999999998   999999999999999999999999998754322211  111223467789999987654 


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh----hhhhhhhhccc-----ccCCC-----CCHHH
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK----DQKKFVHLVDP-----LLHGR-----YPRRC  144 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~-----~~~~~  144 (213)
                      .++.++|+||+|+++|+|++|..||...........+........    .........+.     .....     .+...
T Consensus       200 ~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  279 (310)
T cd07865         200 DYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVK  279 (310)
T ss_pred             ccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccC
Confidence            367899999999999999999999864332211111100000000    00000000000     00000     00112


Q ss_pred             HHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          145 LNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       145 ~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ...+.++|.+||..||.+||+++++++
T Consensus       280 ~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         280 DPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             CHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            345779999999999999999999974


No 318
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.91  E-value=1.1e-24  Score=172.93  Aligned_cols=146  Identities=27%  Similarity=0.384  Sum_probs=109.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc---cC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SG   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~   78 (213)
                      .++.|++.|+.|||+.+   ++|+||+|+||+++.++.++++|||++.....      .....++..|++||.+.   ..
T Consensus       119 ~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~  189 (308)
T cd06634         119 AVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVILAMDEG  189 (308)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecC------cccccCCccccCHHHHhhcccC
Confidence            46789999999999998   99999999999999999999999998765321      12234677899999874   34


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      .++.++|+|||||++|++++|..||......                ......................+.++|.+||..
T Consensus       190 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  253 (308)
T cd06634         190 QYDGKVDVWSLGITCIELAERKPPLFNMNAM----------------SALYHIAQNESPALQSGHWSEYFRNFVDSCLQK  253 (308)
T ss_pred             CCCcccchHHHHHHHHHHHcCCCCCccccHH----------------HHHHHHhhcCCCCcCcccccHHHHHHHHHHhhC
Confidence            5678999999999999999999997522111                001111111111111234567789999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 028134          159 EANFRPLINDIVVA  172 (213)
Q Consensus       159 ~p~~Rps~~ev~~~  172 (213)
                      +|++||++.+++..
T Consensus       254 ~P~~Rp~~~~ll~~  267 (308)
T cd06634         254 IPQDRPTSEVLLKH  267 (308)
T ss_pred             CcccCCCHHHHhhC
Confidence            99999999999864


No 319
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.91  E-value=3.6e-25  Score=173.39  Aligned_cols=163  Identities=21%  Similarity=0.260  Sum_probs=111.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      +++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||.+........ .......++..|++||.+.+. .+
T Consensus       103 ~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~  178 (286)
T cd07832         103 SYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKY  178 (286)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccC
Confidence            57899999999999998   99999999999999999999999999875432221 112234578889999987654 45


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhh--h------h---hhhhhcccccC----CCCCHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKD--Q------K---KFVHLVDPLLH----GRYPRRCL  145 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~------~---~~~~~~~~~~~----~~~~~~~~  145 (213)
                      +.++|+||+|++++++++|..+|.........   .........  .      .   ....+..+...    ........
T Consensus       179 ~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (286)
T cd07832         179 DPGVDLWAVGCIFAELLNGSPLFPGENDIEQL---AIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDAS  255 (286)
T ss_pred             CchhHHHHHHHHHHHHHcCCcCcCCCCHHHHH---HHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCcc
Confidence            88999999999999999997777533221110   000000000  0      0   00000000000    00112335


Q ss_pred             HHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          146 NYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       146 ~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ..+.+++.+||..+|.+||++++++.
T Consensus       256 ~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         256 PEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHhh
Confidence            78899999999999999999999975


No 320
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.91  E-value=1.6e-24  Score=172.53  Aligned_cols=149  Identities=27%  Similarity=0.406  Sum_probs=112.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc---cC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SG   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~   78 (213)
                      .++.|++.|+.|||+++   ++|+||+|+||+++.++.++|+|||++.....      .....++..|++||.+.   ..
T Consensus       129 ~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~  199 (317)
T cd06635         129 AITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP------ANSFVGTPYWMAPEVILAMDEG  199 (317)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC------cccccCCccccChhhhhcCCCC
Confidence            47889999999999998   99999999999999999999999998764321      12234677899999874   34


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      .++.++|+||+|+++|+|++|..||......                .....+................+.+++.+||+.
T Consensus       200 ~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  263 (317)
T cd06635         200 QYDGKVDVWSLGITCIELAERKPPLFNMNAM----------------SALYHIAQNESPTLQSNEWSDYFRNFVDSCLQK  263 (317)
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCCccHH----------------HHHHHHHhccCCCCCCccccHHHHHHHHHHccC
Confidence            6788999999999999999999998532110                111111111111111234566789999999999


Q ss_pred             CCCCCCCHHHHHHHHHH
Q 028134          159 EANFRPLINDIVVALDY  175 (213)
Q Consensus       159 ~p~~Rps~~ev~~~L~~  175 (213)
                      +|.+||++.+|++.+-.
T Consensus       264 ~p~~Rpt~~~il~~~~~  280 (317)
T cd06635         264 IPQDRPTSEELLKHMFV  280 (317)
T ss_pred             CcccCcCHHHHHhChhh
Confidence            99999999999985443


No 321
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.91  E-value=6.9e-25  Score=176.07  Aligned_cols=168  Identities=25%  Similarity=0.275  Sum_probs=114.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC---cccccccccccccCcccccc-
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT---HVSTRVMGTYGYCAPEYAMS-   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~Pe~~~~-   77 (213)
                      .++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||++.........   .......++..|++||.+.+ 
T Consensus       111 ~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  187 (337)
T cd07852         111 YIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGS  187 (337)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeecc
Confidence            47899999999999998   999999999999999999999999998754332211   12223456788999998764 


Q ss_pred             CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh-------hhhhhhhhcccc---cCC---CCCHHH
Q 028134           78 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-------DQKKFVHLVDPL---LHG---RYPRRC  144 (213)
Q Consensus        78 ~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~---~~~~~~  144 (213)
                      ..++.++|+||+|+++|+|++|..||....................       .......+++..   ...   .....+
T Consensus       188 ~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (337)
T cd07852         188 TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKA  267 (337)
T ss_pred             ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCC
Confidence            4568899999999999999999999864332211100000000000       000000111100   000   011124


Q ss_pred             HHHHHHHHHhhcCcCCCCCCCHHHHHHH
Q 028134          145 LNYAVAVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       145 ~~~~~~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                      ...+.++|..||+.+|++||++.++++.
T Consensus       268 ~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         268 SDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             CHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            6788999999999999999999999973


No 322
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.91  E-value=3.8e-25  Score=179.13  Aligned_cols=150  Identities=23%  Similarity=0.272  Sum_probs=107.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC------------------------
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT------------------------   57 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~------------------------   57 (213)
                      .++.|++.||.|||+++   ++||||||+||+++.++.++|+|||++.........                        
T Consensus       105 ~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (360)
T cd05627         105 FYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRK  181 (360)
T ss_pred             HHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccc
Confidence            47899999999999998   999999999999999999999999987643211000                        


Q ss_pred             ---------cccccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhh
Q 028134           58 ---------HVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKF  128 (213)
Q Consensus        58 ---------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (213)
                               .......|+..|+|||.+.+..++.++|+||+||++|+|++|..||.......                ..
T Consensus       182 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~----------------~~  245 (360)
T cd05627         182 AETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQE----------------TY  245 (360)
T ss_pred             cccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHH----------------HH
Confidence                     00112468899999999998899999999999999999999999996332111                11


Q ss_pred             hhhcccccCCCCC--HHHHHHHHHHHHhhcCcCCCCCCC---HHHHHH
Q 028134          129 VHLVDPLLHGRYP--RRCLNYAVAVTAMCLNEEANFRPL---INDIVV  171 (213)
Q Consensus       129 ~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~Rps---~~ev~~  171 (213)
                      ..+.+......++  ......+.+++.+|+ .+|.+|++   +.++++
T Consensus       246 ~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~  292 (360)
T cd05627         246 RKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKS  292 (360)
T ss_pred             HHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence            1111100000111  124556788888866 49999985   566665


No 323
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.91  E-value=1.5e-24  Score=170.13  Aligned_cols=149  Identities=28%  Similarity=0.370  Sum_probs=112.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||.+.+..++
T Consensus       120 ~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~  194 (286)
T cd06614         120 YVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK--SKRNSVVGTPYWMAPEVIKRKDYG  194 (286)
T ss_pred             HHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccch--hhhccccCCcccCCHhHhcCCCCC
Confidence            47899999999999998   9999999999999999999999999876432211  111223467789999998888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhccccc-CCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      .+.|+|++|+++|++++|..||.......                ....+..... ....+..+...+.+++.+||+.+|
T Consensus       195 ~~~Dv~slGvil~~l~~g~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  258 (286)
T cd06614         195 PKVDIWSLGIMCIEMAEGEPPYLREPPLR----------------ALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDP  258 (286)
T ss_pred             CccccHHHHHHHHHHHhCCCCCCCCCHHH----------------HHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccCh
Confidence            99999999999999999999985221110                0001111111 111122356789999999999999


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      .+||++.+++.
T Consensus       259 ~~Rpt~~~il~  269 (286)
T cd06614         259 EKRPSAEELLQ  269 (286)
T ss_pred             hhCcCHHHHhh
Confidence            99999999975


No 324
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.91  E-value=7.6e-25  Score=171.44  Aligned_cols=163  Identities=21%  Similarity=0.252  Sum_probs=110.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      +++.|+++||+|||+++   ++|+||+|+||+++.++.++|+|||.+.......  .......++..|++||.+.+. .+
T Consensus       103 ~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~  177 (283)
T cd07835         103 SYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGSRQY  177 (283)
T ss_pred             HHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCc--cccCccccccCCCCCceeecCccc
Confidence            57899999999999998   9999999999999999999999999986432211  111223457789999987654 46


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhh-------hhhhh---cccccC---CCCCHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQK-------KFVHL---VDPLLH---GRYPRRCLNY  147 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~---~~~~~~~~~~  147 (213)
                      +.++|+||+|+++|++++|..||........  .............       .....   +.....   ..........
T Consensus       178 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (283)
T cd07835         178 STPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ--LFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDED  255 (283)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHH
Confidence            8899999999999999999999864322111  0000000000000       00000   000000   0111233467


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      +.+++.+||+.+|++||+++++++
T Consensus       256 ~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         256 GLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhc
Confidence            889999999999999999999974


No 325
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.91  E-value=1.5e-24  Score=170.91  Aligned_cols=151  Identities=25%  Similarity=0.330  Sum_probs=113.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|++|||+++   ++|+||+|+||+++.++.++|+|||++.......  .......++..|++||......++
T Consensus       119 ~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~  193 (293)
T cd06647         119 AVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYG  193 (293)
T ss_pred             HHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccccc--cccccccCChhhcCchhhccCCCC
Confidence            47889999999999998   9999999999999999999999999876432221  112233567789999998888888


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++|++++|..||............               ..........+......+.+++..||..+|+
T Consensus       194 ~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~  258 (293)
T cd06647         194 PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---------------ATNGTPELQNPEKLSAIFRDFLNRCLEMDVE  258 (293)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh---------------hcCCCCCCCCccccCHHHHHHHHHHccCChh
Confidence            9999999999999999999999643221110000               0000000111234456788999999999999


Q ss_pred             CCCCHHHHHHH
Q 028134          162 FRPLINDIVVA  172 (213)
Q Consensus       162 ~Rps~~ev~~~  172 (213)
                      +||++.+++..
T Consensus       259 ~Rp~~~~il~h  269 (293)
T cd06647         259 KRGSAKELLQH  269 (293)
T ss_pred             hCcCHHHHhcC
Confidence            99999999864


No 326
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.91  E-value=1.4e-24  Score=169.79  Aligned_cols=148  Identities=28%  Similarity=0.359  Sum_probs=112.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      .++.|++.|++|||+.+   ++|+||+|+||+++.++.++|+|||++......    ......++..|++||.+.+. .+
T Consensus       101 ~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~  173 (278)
T cd05606         101 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAY  173 (278)
T ss_pred             HHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCcc----CCcCcCCCcCCcCcHHhcCCCCC
Confidence            57899999999999998   999999999999999999999999998643221    11234578899999998744 57


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||+|+++|+|++|..||.........              ...... .......+......+.+++.+||..+|
T Consensus       174 ~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~--------------~~~~~~-~~~~~~~~~~~s~~~~~li~~~l~~~p  238 (278)
T cd05606         174 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--------------EIDRMT-LTMAVELPDSFSPELRSLLEGLLQRDV  238 (278)
T ss_pred             CcccchHhHHHHHHHHHhCCCCCCCCCccchH--------------HHHHHh-hccCCCCCCcCCHHHHHHHHHHhhcCH
Confidence            89999999999999999999999643221110              000000 011122334456789999999999999


Q ss_pred             CCCC-----CHHHHHH
Q 028134          161 NFRP-----LINDIVV  171 (213)
Q Consensus       161 ~~Rp-----s~~ev~~  171 (213)
                      .+||     ++.++++
T Consensus       239 ~~R~~~~~~~~~~ll~  254 (278)
T cd05606         239 NRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HhccCCCCCCHHHHHh
Confidence            9999     9999975


No 327
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.91  E-value=3.2e-25  Score=168.67  Aligned_cols=185  Identities=23%  Similarity=0.226  Sum_probs=123.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCC----CceEEeeeecccccCCCCCCc-ccccccccccccCccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND----FNPKLSDFGLAKLGPVGDNTH-VSTRVMGTYGYCAPEYAM   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~----~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~~~   76 (213)
                      ++++||+.|+.|||++.   |+||||||.||++..+    |.+||+|+|+++.+...-... ......-|.+|+|||.+.
T Consensus       136 silwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLL  212 (438)
T KOG0666|consen  136 SILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLL  212 (438)
T ss_pred             HHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhc
Confidence            57899999999999998   9999999999999666    999999999998764332221 123345689999999998


Q ss_pred             cC-CCCCccceeeHHHHHHHHHhCCCCccccCCCCccc------hhhchhhhhh--hhhhhhhh---------cccccCC
Q 028134           77 SG-KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQN------LVSWSRPFLK--DQKKFVHL---------VDPLLHG  138 (213)
Q Consensus        77 ~~-~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~------~~~~~~~~~~--~~~~~~~~---------~~~~~~~  138 (213)
                      +. .|+.+.|+|++|||+.||++-.+.|.+........      -++...+.+.  ..+.+..+         +......
T Consensus       213 Ga~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~  292 (438)
T KOG0666|consen  213 GARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRH  292 (438)
T ss_pred             ccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHh
Confidence            75 68999999999999999999988886543332211      0000000000  00000000         0000000


Q ss_pred             CCCH-----------HHHHHHHHHHHhhcCcCCCCCCCHHHHHHHHHHHhhccCCCcccCCC
Q 028134          139 RYPR-----------RCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHPVSRNA  189 (213)
Q Consensus       139 ~~~~-----------~~~~~~~~li~~cl~~~p~~Rps~~ev~~~L~~l~~~~~~~~~~~~~  189 (213)
                      .+.+           .-++...+++..+|..||-+|-|+++.++..-.........|..++.
T Consensus       293 ~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lpp~pt~~~v  354 (438)
T KOG0666|consen  293 YYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLPPLPTSDNV  354 (438)
T ss_pred             hcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCCCCccccee
Confidence            0000           01233788999999999999999999988655555545544444444


No 328
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.91  E-value=2.2e-24  Score=163.23  Aligned_cols=152  Identities=24%  Similarity=0.229  Sum_probs=114.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeC---CCCceEEeeeecccccCCCCCCcccccccccccccCccccccC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLD---NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~   78 (213)
                      .|+.||+.|+.|||+.+   |.||||||+|+|+.   .|..+||+|||++......   ........|+-|.|||++--.
T Consensus       165 eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~---~~L~TPc~TPyYvaPevlg~e  238 (400)
T KOG0604|consen  165 EIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP---GDLMTPCFTPYYVAPEVLGPE  238 (400)
T ss_pred             HHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccccccccCCC---ccccCCcccccccCHHHhCch
Confidence            47899999999999998   99999999999994   4677899999999864321   122334568899999999888


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCC--HHHHHHHHHHHHhhc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYP--RRCLNYAVAVTAMCL  156 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl  156 (213)
                      +|+...|+||+|+++|-|++|.+||-......-.            .+....+........-+  ....+...++|+.+|
T Consensus       239 KydkscdmwSlgVimYIlLCGyPPFYS~hg~ais------------pgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LL  306 (400)
T KOG0604|consen  239 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------------PGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLL  306 (400)
T ss_pred             hcCCCCCccchhHHHHHhhcCCCcccccCCccCC------------hhHHhHhhccCccCCChhHhHHHHHHHHHHHHHh
Confidence            9999999999999999999999999533322110            12222222211111111  245677889999999


Q ss_pred             CcCCCCCCCHHHHHH
Q 028134          157 NEEANFRPLINDIVV  171 (213)
Q Consensus       157 ~~~p~~Rps~~ev~~  171 (213)
                      ..+|.+|-|+.+++.
T Consensus       307 kt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  307 KTEPTERLTIEEVMD  321 (400)
T ss_pred             cCCchhheeHHHhhc
Confidence            999999999999975


No 329
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.91  E-value=9.1e-25  Score=175.17  Aligned_cols=167  Identities=22%  Similarity=0.286  Sum_probs=113.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC--cccccccccccccCcccccc-C
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT--HVSTRVMGTYGYCAPEYAMS-G   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~-~   78 (213)
                      .++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||++.........  .......++..|++||.+.+ .
T Consensus       111 ~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  187 (334)
T cd07855         111 YFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLP  187 (334)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCc
Confidence            57899999999999998   999999999999999999999999998754322211  11123457788999998765 4


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhh-----hh--hhhhhhhhcccc-cCCC-----CCHHHH
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPF-----LK--DQKKFVHLVDPL-LHGR-----YPRRCL  145 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~-~~~~-----~~~~~~  145 (213)
                      .++.++|+||+|+++|+|++|..||..................     ..  ........++.. ....     .....+
T Consensus       188 ~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (334)
T cd07855         188 EYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKAS  267 (334)
T ss_pred             ccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCC
Confidence            5789999999999999999999999643221110000000000     00  001111111100 0000     112346


Q ss_pred             HHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          146 NYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       146 ~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ..+.+++..||+.+|++||++.+++.
T Consensus       268 ~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         268 PEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHh
Confidence            78999999999999999999999887


No 330
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91  E-value=5.8e-25  Score=180.82  Aligned_cols=148  Identities=24%  Similarity=0.343  Sum_probs=115.1

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc-----c
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-----S   77 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-----~   77 (213)
                      +++|+++||.|||+++   |+|||||+-|||++.+|.++|+|||.+-.  ..........++||+-|+|||+..     .
T Consensus       135 vc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAK--n~~t~qkRDsFIGTPYWMAPEVvmCET~KD  209 (1187)
T KOG0579|consen  135 VCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAK--NKSTRQKRDSFIGTPYWMAPEVVMCETFKD  209 (1187)
T ss_pred             HHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeeccccccc--chhHHhhhccccCCcccccchheeeccccC
Confidence            6899999999999998   99999999999999999999999999753  122233345689999999999765     4


Q ss_pred             CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhccccc-CCCCCHHHHHHHHHHHHhhc
Q 028134           78 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGRYPRRCLNYAVAVTAMCL  156 (213)
Q Consensus        78 ~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl  156 (213)
                      .+|++++||||||+.+.||..+.+|-.   +.+.++++.             .+..... ....|......|.+++.+||
T Consensus       210 ~PYDykaDiWSlGITLIEMAqiEPPHh---elnpMRVll-------------KiaKSePPTLlqPS~Ws~~F~DfLk~cL  273 (1187)
T KOG0579|consen  210 QPYDYKADIWSLGITLIEMAQIEPPHH---ELNPMRVLL-------------KIAKSEPPTLLQPSHWSRSFSDFLKRCL  273 (1187)
T ss_pred             CCchhhhhHHhhhhHHHHHhccCCCcc---ccchHHHHH-------------HHhhcCCCcccCcchhhhHHHHHHHHHH
Confidence            589999999999999999999988864   222221111             1111000 00125567788999999999


Q ss_pred             CcCCCCCCCHHHHHH
Q 028134          157 NEEANFRPLINDIVV  171 (213)
Q Consensus       157 ~~~p~~Rps~~ev~~  171 (213)
                      ..||..||+++++++
T Consensus       274 ~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  274 VKNPRNRPPAAQLLK  288 (1187)
T ss_pred             hcCCccCCCHHHHhh
Confidence            999999999999876


No 331
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.91  E-value=4.8e-24  Score=170.89  Aligned_cols=151  Identities=19%  Similarity=0.217  Sum_probs=106.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS----   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~----   77 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||++........ .......++..|++||.+..    
T Consensus       106 ~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~  181 (331)
T cd05597         106 FYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT-VQSNVAVGTPDYISPEILQAMEDG  181 (331)
T ss_pred             HHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCCCC-ccccceeccccccCHHHHhhcccc
Confidence            46789999999999998   99999999999999999999999999865322211 11122457889999998863    


Q ss_pred             -CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccc--c-CCCCCHHHHHHHHHHHH
Q 028134           78 -GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL--L-HGRYPRRCLNYAVAVTA  153 (213)
Q Consensus        78 -~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~li~  153 (213)
                       ..++.++|+||+||++|+|++|..||.......                ....+....  . ...........+.+++.
T Consensus       182 ~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~----------------~~~~i~~~~~~~~~~~~~~~~~~~~~~li~  245 (331)
T cd05597         182 KGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE----------------TYGKIMNHKEHFQFPPDVTDVSEEAKDLIR  245 (331)
T ss_pred             ccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHH----------------HHHHHHcCCCcccCCCccCCCCHHHHHHHH
Confidence             346788999999999999999999996321110                000111100  0 00111234567788888


Q ss_pred             hhcCcCCC--CCCCHHHHHHH
Q 028134          154 MCLNEEAN--FRPLINDIVVA  172 (213)
Q Consensus       154 ~cl~~~p~--~Rps~~ev~~~  172 (213)
                      +|+..++.  .||++.++++.
T Consensus       246 ~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         246 RLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             HHccCcccccCCCCHHHHhcC
Confidence            87765443  37899998874


No 332
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.91  E-value=1.7e-24  Score=169.70  Aligned_cols=160  Identities=27%  Similarity=0.394  Sum_probs=114.9

Q ss_pred             hhHHHHHHHHHHhhc-CCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHC-KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~-~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.||.|||+ .+   ++|+||+|+||+++.++.++|+|||++......    ......++..|++||.+.+..+
T Consensus       107 ~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~  179 (284)
T cd06620         107 KIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS----IADTFVGTSTYMSPERIQGGKY  179 (284)
T ss_pred             HHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhh----ccCccccCcccCCHHHHccCCC
Confidence            578899999999996 46   999999999999999999999999987543111    1123457889999999888888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCC-HHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYP-RRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~~  159 (213)
                      +.++|+||+||++|++++|..||.............  ...   ......++... ....+ ..+...+.+++.+||..+
T Consensus       180 ~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~d  253 (284)
T cd06620         180 TVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDP--MGI---LDLLQQIVQEP-PPRLPSSDFPEDLRDFVDACLLKD  253 (284)
T ss_pred             CccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhh--hHH---HHHHHHHhhcc-CCCCCchhcCHHHHHHHHHHhcCC
Confidence            999999999999999999999997443221100000  000   01111111111 11111 235667999999999999


Q ss_pred             CCCCCCHHHHHHHHH
Q 028134          160 ANFRPLINDIVVALD  174 (213)
Q Consensus       160 p~~Rps~~ev~~~L~  174 (213)
                      |++||++.|+++..-
T Consensus       254 p~~Rpt~~e~~~~~~  268 (284)
T cd06620         254 PTERPTPQQLCAMPP  268 (284)
T ss_pred             cccCcCHHHHhcCcc
Confidence            999999999997643


No 333
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.91  E-value=2.7e-24  Score=168.69  Aligned_cols=150  Identities=28%  Similarity=0.343  Sum_probs=119.1

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCC----------------------------
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVG----------------------------   54 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~----------------------------   54 (213)
                      ++.+++-||+|||..|   ||+|||||+|||+.++|.+.|.||.++..+...                            
T Consensus       184 YaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~  260 (459)
T KOG0610|consen  184 YAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSP  260 (459)
T ss_pred             HHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCccccccccccccc
Confidence            4678999999999999   999999999999999999999999987553210                            


Q ss_pred             ----C-CC---------------------cccccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCC
Q 028134           55 ----D-NT---------------------HVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKG  108 (213)
Q Consensus        55 ----~-~~---------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~  108 (213)
                          . ..                     .....+.||..|.|||++.+..-..+.|+|.||+++|||+.|..||.+...
T Consensus       261 r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~  340 (459)
T KOG0610|consen  261 RCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN  340 (459)
T ss_pred             chhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc
Confidence                0 00                     001235789999999999999999999999999999999999999974432


Q ss_pred             CCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCCCCCC----HHHHHH
Q 028134          109 QGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPL----INDIVV  171 (213)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps----~~ev~~  171 (213)
                                      ...+..++-+.+...-.......+.+||++.|..||.+|-.    ++||.+
T Consensus       341 ----------------~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  341 ----------------KETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             ----------------hhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence                            24444455444433333366778999999999999999988    888876


No 334
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.91  E-value=9.1e-25  Score=174.76  Aligned_cols=174  Identities=21%  Similarity=0.262  Sum_probs=113.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCC-Cc----ccccccccccccCccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN-TH----VSTRVMGTYGYCAPEYAM   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~----~~~~~~~~~~~~~Pe~~~   76 (213)
                      .++.|++.||+|||+++   ++|+||||+||+++.++.+++.||+.......... ..    ......++..|++||.+.
T Consensus       105 ~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (328)
T cd08226         105 NILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLR  181 (328)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhc
Confidence            57899999999999998   99999999999999999999999875432211100 00    001122355799999987


Q ss_pred             cC--CCCCccceeeHHHHHHHHHhCCCCccccCCCCcc-chh------hchhhhhhhhh--------hh-----------
Q 028134           77 SG--KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ-NLV------SWSRPFLKDQK--------KF-----------  128 (213)
Q Consensus        77 ~~--~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~-~~~------~~~~~~~~~~~--------~~-----------  128 (213)
                      +.  .++.++|+||+||++|++++|..||......... ...      .+.........        ..           
T Consensus       182 ~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (328)
T cd08226         182 QDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAA  261 (328)
T ss_pred             CCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhcc
Confidence            63  4688999999999999999999999643211000 000      00000000000        00           


Q ss_pred             ---hhhcccccCCCCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH--HHHHHhh
Q 028134          129 ---VHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV--ALDYLVS  178 (213)
Q Consensus       129 ---~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~--~L~~l~~  178 (213)
                         ...............+...+.+++.+||+.||++|||+.++++  .+..+.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~  316 (328)
T cd08226         262 GMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE  316 (328)
T ss_pred             ccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence               0011111122223456788999999999999999999999975  5555544


No 335
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.91  E-value=2.7e-24  Score=170.84  Aligned_cols=165  Identities=21%  Similarity=0.280  Sum_probs=111.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC-----cccccccccccccCccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT-----HVSTRVMGTYGYCAPEYAM   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~Pe~~~   76 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++++||+.+.........     .......++..|++||.+.
T Consensus       105 ~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (314)
T cd08216         105 FILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQ  181 (314)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhc
Confidence            47899999999999998   999999999999999999999999987643221110     1112234566899999886


Q ss_pred             c--CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchh----------hhhhhhhhhhh----hccc----cc
Q 028134           77 S--GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR----------PFLKDQKKFVH----LVDP----LL  136 (213)
Q Consensus        77 ~--~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----~~~~----~~  136 (213)
                      .  ..++.++|+||+||++|+|++|..||........  ..+...          ...........    ..++    ..
T Consensus       182 ~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (314)
T cd08216         182 QNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM--LLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSV  259 (314)
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCccccccCchhhhcCCcCcccccccccchhhhh
Confidence            5  3578899999999999999999999963221100  000000          00000000000    0000    01


Q ss_pred             CCCCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          137 HGRYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       137 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ...........+.+++..||..||++||++.++++
T Consensus       260 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         260 DHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             hcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence            11122345567899999999999999999999987


No 336
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.91  E-value=1.3e-24  Score=172.15  Aligned_cols=155  Identities=23%  Similarity=0.263  Sum_probs=111.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC-------------ccccccccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT-------------HVSTRVMGTYG   68 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-------------~~~~~~~~~~~   68 (213)
                      .++.|++.|++|||+.+   ++|+||+|.||+++.++.++++|||++.........             .......++..
T Consensus       105 ~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (305)
T cd05609         105 MYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPE  181 (305)
T ss_pred             HHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCcc
Confidence            46789999999999998   999999999999999999999999987632111000             00112345778


Q ss_pred             ccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccc-cCCCCCHHHHHH
Q 028134           69 YCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPL-LHGRYPRRCLNY  147 (213)
Q Consensus        69 ~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  147 (213)
                      |++||.+.+..++.++|+||||+++|++++|..||......                .......... ........++..
T Consensus       182 y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~  245 (305)
T cd05609         182 YIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE----------------ELFGQVISDDIEWPEGDEALPAD  245 (305)
T ss_pred             ccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----------------HHHHHHHhcccCCCCccccCCHH
Confidence            99999988888899999999999999999999998532110                0000111100 011111245667


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVVALDY  175 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~~L~~  175 (213)
                      +.+++.+||+.+|++||+..++.+.|+.
T Consensus       246 ~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         246 AQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             HHHHHHHHhccChhhccCccCHHHHHhC
Confidence            8999999999999999997666665544


No 337
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.91  E-value=6.8e-25  Score=171.73  Aligned_cols=165  Identities=22%  Similarity=0.246  Sum_probs=111.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      +++.|+++|++|||+.+   ++|+||+|+||+++.++.++++|||++......... ......++..|++||.+.+ ..+
T Consensus       104 ~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~  179 (287)
T cd07840         104 CYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA-DYTNRVITLWYRPPELLLGATRY  179 (287)
T ss_pred             HHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc-cccccccccccCCceeeEccccC
Confidence            57899999999999998   999999999999999999999999998764332211 1122345678999997764 357


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhh--------------hhcccccCCCCCHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFV--------------HLVDPLLHGRYPRRCLN  146 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~  146 (213)
                      +.++|+|+||+++|++++|..||................... ......              ..........+...+..
T Consensus       180 ~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (287)
T cd07840         180 GPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSP-TDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDP  258 (287)
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC-chhhccccccchhhhhccccccchhHHHHHhcccCCH
Confidence            889999999999999999999986433211100000000000 000000              00000000011112366


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+.+++.+||..+|.+||++.++++
T Consensus       259 ~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         259 SALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhh
Confidence            7899999999999999999999875


No 338
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.91  E-value=2.1e-24  Score=167.50  Aligned_cols=150  Identities=22%  Similarity=0.255  Sum_probs=114.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCC-CcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN-THVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      +++.|++.||.|||+++   ++|+||+|+||+++.++.++|+|||++........ ........++..|++||.+.+..+
T Consensus       110 ~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  186 (264)
T cd06653         110 RYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGY  186 (264)
T ss_pred             HHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCC
Confidence            57899999999999998   99999999999999999999999999875321111 111122456788999999988888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||||++++++++|..||.....                .....+..........+......+.+++.+||. +|
T Consensus       187 ~~~~Di~slG~il~~l~~g~~p~~~~~~----------------~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~  249 (264)
T cd06653         187 GRKADVWSVACTVVEMLTEKPPWAEYEA----------------MAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EE  249 (264)
T ss_pred             CccccHHHHHHHHHHHHhCCCCCCccCH----------------HHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-Cc
Confidence            9999999999999999999999852210                111222222222334466677889999999999 57


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      ..||++.+++.
T Consensus       250 ~~r~~~~~~~~  260 (264)
T cd06653         250 KRRPTAEFLLR  260 (264)
T ss_pred             ccCccHHHHhc
Confidence            99999998864


No 339
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.91  E-value=8.2e-25  Score=172.22  Aligned_cols=162  Identities=19%  Similarity=0.201  Sum_probs=109.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC-CCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN-DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GK   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~   79 (213)
                      .++.|++.||.|||+++   ++|+||+|+||+++. ++.++|+|||++.........  .....++..|++||.+.+ ..
T Consensus       114 ~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~  188 (295)
T cd07837         114 SFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKS--YTHEIVTLWYRAPEVLLGSTH  188 (295)
T ss_pred             HHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecccceecCCCccc--cCCcccccCCCChHHhhCCCC
Confidence            57899999999999998   999999999999998 889999999988754221111  112245678999998765 45


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh-h-hhh------hhhhcc-cccCC----CCCHHHHH
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK-D-QKK------FVHLVD-PLLHG----RYPRRCLN  146 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~-~~~------~~~~~~-~~~~~----~~~~~~~~  146 (213)
                      ++.++|+||+|+++|+|++|..||.........  .... .... . ...      ...... +....    ........
T Consensus       189 ~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (295)
T cd07837         189 YSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQL--LHIF-KLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSP  265 (295)
T ss_pred             CCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHH--HHHH-HHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCH
Confidence            688999999999999999999998643211100  0000 0000 0 000      000000 00000    00123456


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+.++|.+||..+|.+||++.|++.
T Consensus       266 ~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         266 EGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             HHHHHHHHHccCChhhcCCHHHHhc
Confidence            7899999999999999999999874


No 340
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.91  E-value=2e-24  Score=166.96  Aligned_cols=148  Identities=26%  Similarity=0.324  Sum_probs=113.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|+++||.|||+.+   ++|+||+|+||+++.++.++|+|||.+.......   ......++..|++||...+..++
T Consensus       104 ~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~  177 (258)
T cd05578         104 FWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYS  177 (258)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc---cccccCCChhhcCHHHHcccCCC
Confidence            57899999999999998   9999999999999999999999999987543221   12234567789999998888889


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|+++|++++|..||........              ......... .....+......+.+++.+||..+|.
T Consensus       178 ~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--------------~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~  242 (258)
T cd05578         178 VAVDWWSLGVTAYECLRGKRPYRGHSRTIR--------------DQIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQ  242 (258)
T ss_pred             CcccchhhHHHHHHHHhCCCCCCCCCccHH--------------HHHHHHhcc-ccccCcccCcHHHHHHHHHHccCChh
Confidence            999999999999999999999874432211              111111111 12223445567899999999999999


Q ss_pred             CCCCH--HHHH
Q 028134          162 FRPLI--NDIV  170 (213)
Q Consensus       162 ~Rps~--~ev~  170 (213)
                      +||++  +|++
T Consensus       243 ~R~~~~~~~l~  253 (258)
T cd05578         243 KRLGDNLKDLK  253 (258)
T ss_pred             HcCCccHHHHh
Confidence            99999  6554


No 341
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.91  E-value=1.7e-24  Score=168.54  Aligned_cols=147  Identities=24%  Similarity=0.329  Sum_probs=111.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC-ceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF-NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~-~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      .++.|++.||.|||+.+   ++|+||+|+||+++.++ .++++|||++......      ....++..|++||.+.+..+
T Consensus       113 ~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~  183 (267)
T PHA03390        113 KIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP------SCYDGTLDYFSPEKIKGHNY  183 (267)
T ss_pred             HHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccceecCCC------ccCCCCCcccChhhhcCCCC
Confidence            57899999999999998   99999999999999888 9999999988653221      12346788999999988888


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      +.++|+||+|+++|++++|..||........ ..           ..+......  ...........+.+++..||+.+|
T Consensus       184 ~~~~DvwslG~il~~l~~g~~p~~~~~~~~~-~~-----------~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p  249 (267)
T PHA03390        184 DVSFDWWAVGVLTYELLTGKHPFKEDEDEEL-DL-----------ESLLKRQQK--KLPFIKNVSKNANDFVQSMLKYNI  249 (267)
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCCCCcchh-hH-----------HHHHHhhcc--cCCcccccCHHHHHHHHHHhccCh
Confidence            9999999999999999999999973322110 00           001111111  112233566789999999999999


Q ss_pred             CCCCC-HHHHHH
Q 028134          161 NFRPL-INDIVV  171 (213)
Q Consensus       161 ~~Rps-~~ev~~  171 (213)
                      .+||+ ++++++
T Consensus       250 ~~R~~~~~~~l~  261 (267)
T PHA03390        250 NYRLTNYNEIIK  261 (267)
T ss_pred             hhCCchHHHHhc
Confidence            99996 588873


No 342
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91  E-value=1.3e-24  Score=159.70  Aligned_cols=146  Identities=23%  Similarity=0.340  Sum_probs=119.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|+.|+|.++   ++||||||+|+|++..+.+|++|||-+-..+    ........||..|.+||...+...+
T Consensus       128 ~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p----~~kR~tlcgt~dyl~pEmv~~~~hd  200 (281)
T KOG0580|consen  128 TYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP----SNKRKTLCGTLDYLPPEMVEGRGHD  200 (281)
T ss_pred             HHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC----CCCceeeecccccCCHhhcCCCCcc
Confidence            36799999999999998   9999999999999999999999999875422    3334557899999999999999999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      ...|+|++|+++||++.|..||+.....                ....++..  .+..+|........++|.+|+..+|.
T Consensus       201 ~~Vd~w~lgvl~yeflvg~ppFes~~~~----------------etYkrI~k--~~~~~p~~is~~a~dlI~~ll~~~p~  262 (281)
T KOG0580|consen  201 KFVDLWSLGVLCYEFLVGLPPFESQSHS----------------ETYKRIRK--VDLKFPSTISGGAADLISRLLVKNPI  262 (281)
T ss_pred             chhhHHHHHHHHHHHHhcCCchhhhhhH----------------HHHHHHHH--ccccCCcccChhHHHHHHHHhccCcc
Confidence            9999999999999999999999733311                11111111  12234566777899999999999999


Q ss_pred             CCCCHHHHHHH
Q 028134          162 FRPLINDIVVA  172 (213)
Q Consensus       162 ~Rps~~ev~~~  172 (213)
                      +|....|+++.
T Consensus       263 ~r~~l~~v~~h  273 (281)
T KOG0580|consen  263 ERLALTEVMDH  273 (281)
T ss_pred             ccccHHHHhhh
Confidence            99999999863


No 343
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.91  E-value=1.3e-24  Score=172.43  Aligned_cols=165  Identities=21%  Similarity=0.244  Sum_probs=110.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||.+........  .......+..|++||.+.+ ..+
T Consensus       112 ~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~  186 (309)
T cd07845         112 CLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK--PMTPKVVTLWYRAPELLLGCTTY  186 (309)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCCccC--CCCcccccccccChhhhcCCCCc
Confidence            57899999999999998   99999999999999999999999999876432211  1112234667999998865 457


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchh-----hhhhhhhhh---hhh-cccccCCCC---CHHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR-----PFLKDQKKF---VHL-VDPLLHGRY---PRRCLNYA  148 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~---~~~-~~~~~~~~~---~~~~~~~~  148 (213)
                      +.++|+||+|+++|+|++|..||...........+....     .........   ... +........   .......+
T Consensus       187 ~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (309)
T cd07845         187 TTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAG  266 (309)
T ss_pred             CchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHH
Confidence            899999999999999999999996432211100000000     000000000   000 000000000   01135678


Q ss_pred             HHHHHhhcCcCCCCCCCHHHHHH
Q 028134          149 VAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       149 ~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .++|..||+.||++|||+.+++.
T Consensus       267 ~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         267 LRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             HHHHHHHhcCChhhCcCHHHHhc
Confidence            89999999999999999999984


No 344
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.91  E-value=1.6e-24  Score=183.85  Aligned_cols=159  Identities=21%  Similarity=0.240  Sum_probs=103.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC-CCceEEeeeecccccCCCCCCcccccccccccccCccccccC--
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN-DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG--   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~--   78 (213)
                      .++.|++.||.|||+++   |+||||||+|||++. ++.+||+|||++....... ........+++.|++||.+...  
T Consensus       259 ~i~~qll~aL~yLH~~g---IiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~-~~~~~~~~~t~~Y~APE~~~~~~~  334 (566)
T PLN03225        259 TIMRQILFALDGLHSTG---IVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI-NYIPKEFLLDPRYAAPEQYIMSTQ  334 (566)
T ss_pred             HHHHHHHHHHHHHHHCC---EEeCcCCHHHEEEeCCCCcEEEEeCCCcccccccc-ccCCcccccCCCccChHHhhccCC
Confidence            47899999999999998   999999999999985 6889999999987532221 1222345678899999965322  


Q ss_pred             --------------------CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh---hhhhhhhhcccc
Q 028134           79 --------------------KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK---DQKKFVHLVDPL  135 (213)
Q Consensus        79 --------------------~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  135 (213)
                                          .+..+.||||+||++|||+++..+++..       ...+...+..   +...+...+.+.
T Consensus       335 ~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~  407 (566)
T PLN03225        335 TPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSN-------LIQFNRQLKRNDYDLVAWRKLVEPR  407 (566)
T ss_pred             CCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchH-------HHHHHHHHHhcCCcHHHHHHhhccc
Confidence                                2334569999999999999876554311       0000000000   001111111111


Q ss_pred             cCCC------CCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          136 LHGR------YPRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       136 ~~~~------~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ....      ..........+++.+||+.||.+|||++++++
T Consensus       408 ~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~  449 (566)
T PLN03225        408 ASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALA  449 (566)
T ss_pred             cchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhC
Confidence            1000      01112234568999999999999999999985


No 345
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.91  E-value=1.9e-24  Score=168.82  Aligned_cols=150  Identities=28%  Similarity=0.373  Sum_probs=111.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+++   ++|+||+|+||+++.++.++|+|||.+.....   ........++..|++||.+.+..++
T Consensus        99 ~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~  172 (277)
T cd05577          99 FYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKG---GKKIKGRAGTPGYMAPEVLQGEVYD  172 (277)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhcc---CCccccccCCCCcCCHHHhcCCCCC
Confidence            46789999999999998   99999999999999999999999998865322   1111223466789999998887888


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .++|+||+|++++++++|..||.........             ..+...... .....+......+.+++.+||+.+|.
T Consensus       173 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------------~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~  238 (277)
T cd05577         173 FSVDWFALGCTLYEMIAGRSPFRQRKEKVEK-------------EELKRRTLE-MAVEYPDKFSPEAKDLCEALLQKDPE  238 (277)
T ss_pred             chhhhHHHHHHHHHHhhCCCCCCCCcccccH-------------HHHHhcccc-ccccCCccCCHHHHHHHHHHccCChh
Confidence            9999999999999999999999643321110             011111110 11123344567889999999999999


Q ss_pred             CCC-----CHHHHHH
Q 028134          162 FRP-----LINDIVV  171 (213)
Q Consensus       162 ~Rp-----s~~ev~~  171 (213)
                      +||     ++.+++.
T Consensus       239 ~R~~~~~~~~~~ll~  253 (277)
T cd05577         239 KRLGCRGGSADEVRE  253 (277)
T ss_pred             HccCCCcccHHHHHh
Confidence            999     6666654


No 346
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.91  E-value=1.2e-24  Score=170.89  Aligned_cols=156  Identities=28%  Similarity=0.366  Sum_probs=119.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .+++||+.|+.|+|+++   ++|||||.+|||+++|+.+|++|||++..+..   ......+.|.+.|.+||...+.+|.
T Consensus       157 hfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~---~kfLqTFCGSPLYASPEIvNG~PY~  230 (668)
T KOG0611|consen  157 HFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYAD---KKFLQTFCGSPLYASPEIVNGTPYK  230 (668)
T ss_pred             HHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcc---ccHHHHhcCCcccCCccccCCCCCC
Confidence            47899999999999998   99999999999999999999999999986533   2234567899999999999888874


Q ss_pred             -CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCC-CHHHHHHHHHHHHhhcCcC
Q 028134           82 -LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRY-PRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        82 -~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~  159 (213)
                       +..|.||||+++|-++.|-.||++....                 .+...+.   ++.+ ....+....-+|++||-.|
T Consensus       231 GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk-----------------~lvrQIs---~GaYrEP~~PSdA~gLIRwmLmVN  290 (668)
T KOG0611|consen  231 GPEVDSWSLGVLLYTLVYGTMPFDGRDHK-----------------RLVRQIS---RGAYREPETPSDASGLIRWMLMVN  290 (668)
T ss_pred             CCccchhhHHHHHHHHhhcccccCCchHH-----------------HHHHHhh---cccccCCCCCchHHHHHHHHHhcC
Confidence             7899999999999999999999843321                 1111111   1221 1123345677899999999


Q ss_pred             CCCCCCHHHHHHHHHHHhhccCCCcc
Q 028134          160 ANFRPLINDIVVALDYLVSQRDSHPV  185 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l~~~~~~~~~  185 (213)
                      |++|.|+.+|....  .++.....+.
T Consensus       291 P~RRATieDiAsHW--WvNwgy~~~V  314 (668)
T KOG0611|consen  291 PERRATIEDIASHW--WVNWGYNMPV  314 (668)
T ss_pred             cccchhHHHHhhhh--eeeccccccc
Confidence            99999999998743  3444444333


No 347
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=99.91  E-value=2.4e-24  Score=165.70  Aligned_cols=148  Identities=29%  Similarity=0.374  Sum_probs=113.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|+.+||+++   ++|+||+|+||+++.++.++|+|||.+.........  .....++..|++||...+..++
T Consensus       103 ~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~  177 (254)
T cd06627         103 VYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGAS  177 (254)
T ss_pred             HHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCccc--ccccccchhhcCHhhhcCCCCC
Confidence            47899999999999998   999999999999999999999999998764332211  2234567789999998877788


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .+.|+|++|++++++++|..||......                ....... .......+......+.+++.+||..+|+
T Consensus       178 ~~~Dv~~lG~~l~~l~~g~~p~~~~~~~----------------~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~  240 (254)
T cd06627         178 TASDIWSLGCTVIELLTGNPPYYDLNPM----------------AALFRIV-QDDHPPLPEGISPELKDFLMQCFQKDPN  240 (254)
T ss_pred             cchhHHHHHHHHHHHHhCCCCCCCccHH----------------HHHHHHh-ccCCCCCCCCCCHHHHHHHHHHHhCChh
Confidence            9999999999999999999998632210                0000111 1111223445567889999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.+++.
T Consensus       241 ~R~~~~~~l~  250 (254)
T cd06627         241 LRPTAKQLLK  250 (254)
T ss_pred             hCcCHHHHhc
Confidence            9999999874


No 348
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.91  E-value=2.8e-24  Score=170.94  Aligned_cols=145  Identities=27%  Similarity=0.396  Sum_probs=108.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc---cC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SG   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~   78 (213)
                      .++.|++.|+.|||+++   ++|+||+|+||+++.++.++|+|||++.....      .....++..|++||.+.   ..
T Consensus       125 ~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~  195 (313)
T cd06633         125 AITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP------ANSFVGTPYWMAPEVILAMDEG  195 (313)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC------CCCccccccccChhhccccCCC
Confidence            47889999999999998   99999999999999999999999998764211      12345677899999874   34


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      .++.++|+||+|+++|+|++|..||........                ....................+.+++.+||+.
T Consensus       196 ~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  259 (313)
T cd06633         196 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----------------LYHIAQNDSPTLQSNEWTDSFRGFVDYCLQK  259 (313)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH----------------HHHHHhcCCCCCCccccCHHHHHHHHHHccC
Confidence            578899999999999999999999853221110                0001100011111223445688999999999


Q ss_pred             CCCCCCCHHHHHH
Q 028134          159 EANFRPLINDIVV  171 (213)
Q Consensus       159 ~p~~Rps~~ev~~  171 (213)
                      +|++||++.+++.
T Consensus       260 ~P~~Rp~~~~~l~  272 (313)
T cd06633         260 IPQERPASAELLR  272 (313)
T ss_pred             ChhhCcCHHHHhc
Confidence            9999999999985


No 349
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=99.91  E-value=2.6e-24  Score=170.38  Aligned_cols=167  Identities=23%  Similarity=0.264  Sum_probs=110.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcc---------cccccccccccCc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV---------STRVMGTYGYCAP   72 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~---------~~~~~~~~~~~~P   72 (213)
                      .++.|+++||+|||+++   ++|+||+|+||+++.++.++|+|||++...........         .....++..|++|
T Consensus       119 ~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  195 (311)
T cd07866         119 CYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPP  195 (311)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCCh
Confidence            57899999999999998   99999999999999999999999999875432211111         1123456789999


Q ss_pred             cccccC-CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhh-chhh----hhhhhhhhhhhcccccCCCCC-----
Q 028134           73 EYAMSG-KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS-WSRP----FLKDQKKFVHLVDPLLHGRYP-----  141 (213)
Q Consensus        73 e~~~~~-~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~-----  141 (213)
                      |.+.+. .++.++|+||+|+++|+|++|..||...........+. ....    .......+....+.......+     
T Consensus       196 E~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (311)
T cd07866         196 ELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEE  275 (311)
T ss_pred             HHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHH
Confidence            987653 57889999999999999999999986433321111000 0000    000000000000000000000     


Q ss_pred             --HHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          142 --RRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       142 --~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                        ......+.+++.+||..+|.+|||+.|++.
T Consensus       276 ~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         276 RFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence              122357889999999999999999999874


No 350
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.91  E-value=2.3e-24  Score=169.48  Aligned_cols=163  Identities=21%  Similarity=0.233  Sum_probs=108.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      .++.|++.||.|||+++   ++|+||||+||+++.++.++|+|||++.......  .......++..|++||.+.+. .+
T Consensus       107 ~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~  181 (291)
T cd07870         107 LFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPS--QTYSSEVVTLWYRPPDVLLGATDY  181 (291)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCC--CCCCCccccccccCCceeecCCCC
Confidence            46789999999999998   9999999999999999999999999886432211  111223457889999987653 46


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh--hh----------hhhhhhcccccCCCC-----CHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK--DQ----------KKFVHLVDPLLHGRY-----PRR  143 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~----------~~~~~~~~~~~~~~~-----~~~  143 (213)
                      +.++|+||+|+++|++++|..||........  ........+.  ..          ...............     ...
T Consensus       182 ~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (291)
T cd07870         182 SSALDIWGAGCIFIEMLQGQPAFPGVSDVFE--QLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLS  259 (291)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCchhHHH--HHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccC
Confidence            7889999999999999999999964322100  0000000000  00          000000000000000     001


Q ss_pred             HHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          144 CLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       144 ~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ....+.+++.+|+..||.+|||+.+++.
T Consensus       260 ~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         260 RPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             CChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            2457889999999999999999999874


No 351
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.91  E-value=2e-24  Score=170.18  Aligned_cols=150  Identities=23%  Similarity=0.294  Sum_probs=111.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|++|||+.+   ++|+||+|+||+++.++.++++|||++.......  .......++..|++||...+..++
T Consensus       120 ~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~  194 (292)
T cd06657         120 AVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYG  194 (292)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc--ccccccccCccccCHHHhcCCCCC
Confidence            47899999999999998   9999999999999999999999999876542211  112234567889999988877888


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .+.|+||+|+++|++++|..||........   .          ............  ........+.+++.+||..+|.
T Consensus       195 ~~~Dv~slGvil~el~tg~~p~~~~~~~~~---~----------~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~P~  259 (292)
T cd06657         195 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKA---M----------KMIRDNLPPKLK--NLHKVSPSLKGFLDRLLVRDPA  259 (292)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHHHH---H----------HHHHhhCCcccC--CcccCCHHHHHHHHHHHhCCcc
Confidence            999999999999999999999863211100   0          000001111110  1123455688999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.+++.
T Consensus       260 ~R~~~~~ll~  269 (292)
T cd06657         260 QRATAAELLK  269 (292)
T ss_pred             cCcCHHHHhc
Confidence            9999999986


No 352
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.91  E-value=2.5e-24  Score=169.34  Aligned_cols=144  Identities=28%  Similarity=0.378  Sum_probs=111.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.||.|||+.+   ++|+||+|.||+++.++.++|+|||++......     .....++..|++||.+.+...+
T Consensus       105 ~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~  176 (290)
T cd05580         105 FYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYG  176 (290)
T ss_pred             HHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCC
Confidence            46789999999999998   999999999999999999999999998754222     2234567889999998888888


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .+.|+||||+++|+|++|..||......                .....+...  ...++......+.+++.+||..+|.
T Consensus       177 ~~~Di~slG~il~~l~~g~~p~~~~~~~----------------~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~  238 (290)
T cd05580         177 KAVDWWALGILIYEMLAGYPPFFDDNPI----------------QIYEKILEG--KVRFPSFFSPDAKDLIRNLLQVDLT  238 (290)
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCCCHH----------------HHHHHHhcC--CccCCccCCHHHHHHHHHHccCCHH
Confidence            9999999999999999999998632210                011111111  1122334467889999999999999


Q ss_pred             CCC-----CHHHHHH
Q 028134          162 FRP-----LINDIVV  171 (213)
Q Consensus       162 ~Rp-----s~~ev~~  171 (213)
                      +|+     +++|+++
T Consensus       239 ~R~~~~~~~~~~l~~  253 (290)
T cd05580         239 KRLGNLKNGVNDIKN  253 (290)
T ss_pred             HccCcccCCHHHHHc
Confidence            999     7777764


No 353
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91  E-value=2.5e-24  Score=175.76  Aligned_cols=145  Identities=28%  Similarity=0.414  Sum_probs=116.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc---cC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SG   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~   78 (213)
                      .|+.+.+.||+|||+.+   .+|||||+-|||++..|.+||+|||.+..      ......+.||+.|+|||++.   .+
T Consensus       130 Ai~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi------~~PAnsFvGTPywMAPEVILAMDEG  200 (948)
T KOG0577|consen  130 AITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASI------MAPANSFVGTPYWMAPEVILAMDEG  200 (948)
T ss_pred             HHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhh------cCchhcccCCccccchhHheecccc
Confidence            36789999999999998   99999999999999999999999999864      23345688999999999886   45


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      .|+-++||||||+.+.|+...++|+..                .+.-..+..+....-..-..++....|..++..||+.
T Consensus       201 qYdgkvDvWSLGITCIELAERkPPlFn----------------MNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqK  264 (948)
T KOG0577|consen  201 QYDGKVDVWSLGITCIELAERKPPLFN----------------MNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQK  264 (948)
T ss_pred             ccCCccceeeccchhhhhhhcCCCccC----------------chHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhh
Confidence            789999999999999999999998741                1112223333322211122467788999999999999


Q ss_pred             CCCCCCCHHHHHH
Q 028134          159 EANFRPLINDIVV  171 (213)
Q Consensus       159 ~p~~Rps~~ev~~  171 (213)
                      -|.+|||.++++.
T Consensus       265 ipqeRptse~ll~  277 (948)
T KOG0577|consen  265 IPQERPTSEELLK  277 (948)
T ss_pred             CcccCCcHHHHhh
Confidence            9999999998765


No 354
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.91  E-value=6.3e-24  Score=166.19  Aligned_cols=164  Identities=23%  Similarity=0.215  Sum_probs=110.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc-cCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-SGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-~~~~   80 (213)
                      .++.|++.+|.|||+++   ++|+||+|+||+++.++.++|+|||.+.......   ......++..|++||.+. ...+
T Consensus       103 ~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~  176 (283)
T cd07830         103 SIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP---PYTDYVSTRWYRAPEILLRSTSY  176 (283)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCC---CcCCCCCcccccCceeeecCcCc
Confidence            57889999999999998   9999999999999999999999999987542211   112234677899999775 3457


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccc-hhhchhh----hhhhhhhhhhhcccccC----C---CCCHHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQN-LVSWSRP----FLKDQKKFVHLVDPLLH----G---RYPRRCLNYA  148 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~  148 (213)
                      +.++|+||||++++++++|..||.......... .......    ...........++....    .   .........+
T Consensus       177 ~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (283)
T cd07830         177 SSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEA  256 (283)
T ss_pred             CCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHH
Confidence            899999999999999999999986443221110 0000000    00000000000110000    0   0001124678


Q ss_pred             HHHHHhhcCcCCCCCCCHHHHHH
Q 028134          149 VAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       149 ~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+++.+||+.+|++||+++|++.
T Consensus       257 ~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         257 IDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             HHHHHHhcccCcccCCCHHHHhh
Confidence            99999999999999999999874


No 355
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.91  E-value=1.5e-24  Score=174.48  Aligned_cols=169  Identities=22%  Similarity=0.294  Sum_probs=113.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||++......     .....++..|++||.+.+ ..+
T Consensus       121 ~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~  192 (342)
T cd07879         121 YLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILNWMHY  192 (342)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC-----CCCceeeecccChhhhcCcccc
Confidence            46889999999999998   999999999999999999999999998643211     112345778999998765 457


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchh----hhhh---hhhhhhhhc---ccccCCCC---CHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR----PFLK---DQKKFVHLV---DPLLHGRY---PRRCLNY  147 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~---~~~~~~~~---~~~~~~~  147 (213)
                      +.++|+||+|+++|++++|..||................    +.+.   .........   ........   .......
T Consensus       193 ~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (342)
T cd07879         193 NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQ  272 (342)
T ss_pred             CchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHH
Confidence            889999999999999999999996432111100000000    0000   000000000   00000000   0123456


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHH--HHHHHhh
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVV--ALDYLVS  178 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~--~L~~l~~  178 (213)
                      +.+++.+||+.||++||++++++.  .++....
T Consensus       273 ~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         273 AVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence            889999999999999999999995  4666543


No 356
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.91  E-value=3.9e-24  Score=165.45  Aligned_cols=147  Identities=26%  Similarity=0.353  Sum_probs=111.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|+.|||+.+   ++|+||+|+||+++. +.++++|||++.......  .......++..|++||...+..++
T Consensus       110 ~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~  183 (260)
T cd08222         110 EWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC--DLATTFTGTPYYMSPEALKHQGYD  183 (260)
T ss_pred             HHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecCCCc--ccccCCCCCcCccCHHHHccCCCC
Confidence            57889999999999998   999999999999975 569999999886542221  112234467789999988877888


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .+.|+|++|+++|++++|..||......                ........ ......+..+...+.++|.+||..+|+
T Consensus       184 ~~~Dv~slG~~~~~l~~~~~~~~~~~~~----------------~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~  246 (260)
T cd08222         184 SKSDIWSLGCILYEMCCLAHAFEGQNFL----------------SVVLRIVE-GPTPSLPETYSRQLNSIMQSMLNKDPS  246 (260)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCccHH----------------HHHHHHHc-CCCCCCcchhcHHHHHHHHHHhcCChh
Confidence            8999999999999999999998522110                01111111 112223456677899999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +||++.++++
T Consensus       247 ~Rp~~~~il~  256 (260)
T cd08222         247 LRPSAAEILR  256 (260)
T ss_pred             hCcCHHHHhh
Confidence            9999999975


No 357
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.91  E-value=3.8e-24  Score=168.02  Aligned_cols=156  Identities=26%  Similarity=0.330  Sum_probs=113.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCC--
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK--   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~--   79 (213)
                      .++.|++++|.|||+.+   ++|+||+|.||+++.++.++++|||++........ .......++..|++||...+..  
T Consensus       109 ~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~  184 (288)
T cd05583         109 VYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE-ERAYSFCGTIEYMAPEVIRGGSGG  184 (288)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccccccccc-cccccccCCccccCHHHhcCCCCC
Confidence            46789999999999998   99999999999999999999999998865432211 1122234678899999876654  


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      .+.++|+|++|+++|+|++|..||.........  ..     .     ...+...  ....+......+.+++.+||+.+
T Consensus       185 ~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~--~~-----~-----~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~  250 (288)
T cd05583         185 HDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ--SE-----I-----SRRILKS--KPPFPKTMSAEARDFIQKLLEKD  250 (288)
T ss_pred             CcchhhhHHHHHHHHHHHhCCCCcccCcccchH--HH-----H-----HHHHHcc--CCCCCcccCHHHHHHHHHHhcCC
Confidence            678999999999999999999998632211110  00     0     0011111  11223345567899999999999


Q ss_pred             CCCCCCHHHHHHHHHH
Q 028134          160 ANFRPLINDIVVALDY  175 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~  175 (213)
                      |++|||+.++.+.|+.
T Consensus       251 p~~R~t~~~~~~~l~~  266 (288)
T cd05583         251 PKKRLGANGADEIKNH  266 (288)
T ss_pred             HhhccCcchHHHHhcC
Confidence            9999999888776543


No 358
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.91  E-value=2.2e-24  Score=165.01  Aligned_cols=136  Identities=24%  Similarity=0.241  Sum_probs=104.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.|+++||.|||+++   ++|+||||+||+++.++.+++.|||.+......     ......+..|++||......++
T Consensus        89 ~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~  160 (237)
T cd05576          89 RWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYCAPEVGGISEET  160 (237)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCccccCCcccCCCCCC
Confidence            57899999999999998   999999999999999999999999986543221     1122345679999988777888


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .+.|+||+|+++|++++|..|+.......                      ........+......+.+++.+||+.||+
T Consensus       161 ~~~DvwslG~il~el~~g~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~li~~~l~~dp~  218 (237)
T cd05576         161 EACDWWSLGAILFELLTGKTLVECHPSGI----------------------NTHTTLNIPEWVSEEARSLLQQLLQFNPT  218 (237)
T ss_pred             chhhHHHHHHHHHHHHHCcchhhcCchhc----------------------ccccccCCcccCCHHHHHHHHHHccCCHH
Confidence            99999999999999999998765221100                      00000112334556789999999999999


Q ss_pred             CCCCHH
Q 028134          162 FRPLIN  167 (213)
Q Consensus       162 ~Rps~~  167 (213)
                      +||++.
T Consensus       219 ~R~~~~  224 (237)
T cd05576         219 ERLGAG  224 (237)
T ss_pred             HhcCCC
Confidence            999973


No 359
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91  E-value=2.7e-24  Score=170.02  Aligned_cols=168  Identities=26%  Similarity=0.315  Sum_probs=124.0

Q ss_pred             ChhHHHHHHHHHHhh-----cCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCC-CC-cccccccccccccCcc
Q 028134            1 MKIAVGAARGLEYLH-----CKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGD-NT-HVSTRVMGTYGYCAPE   73 (213)
Q Consensus         1 l~i~~ql~~al~~LH-----~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~-~~~~~~~~~~~~~~Pe   73 (213)
                      ++++..++.||++||     ++|||.|.|||||+.||++..++.+-|+|+|++-...... .. -......||..|||||
T Consensus       311 l~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPE  390 (513)
T KOG2052|consen  311 LKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPE  390 (513)
T ss_pred             HHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChH
Confidence            478999999999999     5679999999999999999999999999999997643331 11 1234467999999999


Q ss_pred             ccccC----CC--CCccceeeHHHHHHHHHhC----------CCCccccCCCCccchhhchhhhhhhhhhhhhhc-cccc
Q 028134           74 YAMSG----KL--TLKSDIYSFGVVLLELITG----------RKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV-DPLL  136 (213)
Q Consensus        74 ~~~~~----~~--~~~~Di~slG~~~~~l~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  136 (213)
                      ++...    .+  -..+||||||+|+||+..+          +.||-.-...+..            .+++.+++ ...+
T Consensus       391 vLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs------------~eeMrkVVCv~~~  458 (513)
T KOG2052|consen  391 VLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS------------FEEMRKVVCVQKL  458 (513)
T ss_pred             HhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC------------HHHHhcceeeccc
Confidence            87632    11  2579999999999999752          2344222211111            12222222 3334


Q ss_pred             CCCCC-----HHHHHHHHHHHHhhcCcCCCCCCCHHHHHHHHHHHhhcc
Q 028134          137 HGRYP-----RRCLNYAVAVTAMCLNEEANFRPLINDIVVALDYLVSQR  180 (213)
Q Consensus       137 ~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~ev~~~L~~l~~~~  180 (213)
                      ++..|     ..+...+.++|..||..||.-|-|+--|.+.|.++.+..
T Consensus       459 RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~  507 (513)
T KOG2052|consen  459 RPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSD  507 (513)
T ss_pred             CCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcCh
Confidence            44433     467889999999999999999999999999999998643


No 360
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.90  E-value=3.7e-24  Score=169.05  Aligned_cols=164  Identities=24%  Similarity=0.262  Sum_probs=110.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||++........ ........+..|++||.+.+ ..+
T Consensus       120 ~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~  195 (302)
T cd07864         120 SFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERY  195 (302)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCC
Confidence            57899999999999998   99999999999999999999999999875432221 11112234667999997764 346


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhh--------cc------cccCCCCCHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHL--------VD------PLLHGRYPRRCLN  146 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~------~~~~~~~~~~~~~  146 (213)
                      +.++|+|++||+++++++|+.||...........+..... .........+        .+      ...... ....+.
T Consensus       196 ~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  273 (302)
T cd07864         196 GPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCG-SPCPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPT  273 (302)
T ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCChhhcccccccccccccccccccccchhhh-cCCCCH
Confidence            7899999999999999999999964322111100000000 0000000000        00      000001 112456


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+.+++.+||+.+|.+||++.+++.
T Consensus       274 ~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         274 PALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhc
Confidence            7899999999999999999999874


No 361
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=99.90  E-value=2.9e-24  Score=168.17  Aligned_cols=163  Identities=21%  Similarity=0.292  Sum_probs=110.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      +++.|++.||.|||+.+   ++|+||+|+||+++.++.++++|||.+.......  .......++..|++||.+.+. .+
T Consensus       104 ~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~  178 (284)
T cd07836         104 SFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPV--NTFSNEVVTLWYRAPDVLLGSRTY  178 (284)
T ss_pred             HHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--cccccccccccccChHHhcCCCCC
Confidence            57899999999999998   9999999999999999999999999886432211  111223457789999987653 46


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhh-hhhhhhhhhcc-cccCC-----------CCCHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFL-KDQKKFVHLVD-PLLHG-----------RYPRRCLNY  147 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~-----------~~~~~~~~~  147 (213)
                      +.++|+|++|+++|++++|..||............  ..... ........+.+ +....           .+.......
T Consensus       179 ~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (284)
T cd07836         179 STSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKI--FRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPL  256 (284)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH--HHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcH
Confidence            88999999999999999999998643322110000  00000 00000000000 00000           011234567


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      +.+++..||+.+|.+||++.++++
T Consensus       257 ~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         257 GIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HHHHHHHHhcCCcccCCCHHHHhc
Confidence            889999999999999999999874


No 362
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=99.90  E-value=7.1e-24  Score=165.63  Aligned_cols=162  Identities=25%  Similarity=0.295  Sum_probs=110.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      +++.|++.||+|||+.+   ++|+||+++||+++.++.++|+|||.+........  .......+..|++||.+.+. .+
T Consensus       102 ~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~  176 (282)
T cd07829         102 SIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHY  176 (282)
T ss_pred             HHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc--ccCccccCcCcCChHHhcCCcCC
Confidence            57899999999999998   99999999999999999999999998875422211  11223446679999988766 77


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh--hhhhhhhh-----ccccc---CC----CCCHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK--DQKKFVHL-----VDPLL---HG----RYPRRCLN  146 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~---~~----~~~~~~~~  146 (213)
                      +.+.|+|++|++++++++|..||.........   ........  ........     .+...   ..    ........
T Consensus       177 ~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (282)
T cd07829         177 STAVDIWSVGCIFAEMITGKPLFPGDSEIDQL---FKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDP  253 (282)
T ss_pred             CccccHHHHHHHHHHHHhCCCCCCCccHHHHH---HHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccH
Confidence            89999999999999999999998643321110   00000000  00000000     00000   00    00012256


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+.+++..||..+|++||++.+++.
T Consensus       254 ~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         254 EGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             HHHHHHHHhhccCcccCCCHHHHhh
Confidence            7999999999999999999999874


No 363
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.90  E-value=4.1e-24  Score=168.33  Aligned_cols=165  Identities=21%  Similarity=0.227  Sum_probs=108.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC-CCceEEeeeecccccCCCCCCcccccccccccccCccccccC-C
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN-DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-K   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~   79 (213)
                      .++.|++.||+|||+++   ++|+||+|+||+++. ++.++++|||++.......  .......++..|++||.+.+. .
T Consensus       106 ~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~  180 (294)
T PLN00009        106 TYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV--RTFTHEVVTLWYRAPEILLGSRH  180 (294)
T ss_pred             HHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCCc--cccccCceeecccCHHHHhCCCC
Confidence            46789999999999998   999999999999975 5678999999986532211  111223457789999987653 5


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccc-hhhch-hh---hhhhhhhh---hhhcccccCC---CCCHHHHHHH
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQN-LVSWS-RP---FLKDQKKF---VHLVDPLLHG---RYPRRCLNYA  148 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~-~~~~~-~~---~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~  148 (213)
                      ++.++|+||+|+++|++++|..||.......... ..... .+   .+.....+   ..........   .........+
T Consensus       181 ~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (294)
T PLN00009        181 YSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAG  260 (294)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHH
Confidence            6889999999999999999999996432211000 00000 00   00000000   0000000000   0012235568


Q ss_pred             HHHHHhhcCcCCCCCCCHHHHHH
Q 028134          149 VAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       149 ~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .+++.+|++.+|++||++.++++
T Consensus       261 ~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        261 VDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             HHHHHHHccCChhhCcCHHHHhc
Confidence            89999999999999999999985


No 364
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=99.90  E-value=9.4e-24  Score=162.18  Aligned_cols=144  Identities=31%  Similarity=0.390  Sum_probs=110.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.|++.|+.|||+.+   ++|+||+|+||+++.++.++++|||.+.......  .......++..|++||...+...+
T Consensus        97 ~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~~~  171 (250)
T cd05123          97 FYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTFCGTPEYLAPEVLLGKGYG  171 (250)
T ss_pred             HHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCCcCCccccChHHhCCCCCC
Confidence            57889999999999998   9999999999999999999999999987542221  112334567789999998887888


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .+.|+|+||+++|++++|..||......                .....+..  ....++......+.+++.+||..+|+
T Consensus       172 ~~~D~~slG~~~~~l~~g~~p~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~p~  233 (250)
T cd05123         172 KAVDWWSLGVLLYEMLTGKPPFYAEDRK----------------EIYEKILK--DPLRFPEFLSPEARDLISGLLQKDPT  233 (250)
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCCCHH----------------HHHHHHhc--CCCCCCCCCCHHHHHHHHHHhcCCHh
Confidence            9999999999999999999998632210                00111111  11233444567889999999999999


Q ss_pred             CCCCHHH
Q 028134          162 FRPLIND  168 (213)
Q Consensus       162 ~Rps~~e  168 (213)
                      +||++++
T Consensus       234 ~R~~~~~  240 (250)
T cd05123         234 KRLGSGG  240 (250)
T ss_pred             hCCCccc
Confidence            9999954


No 365
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.90  E-value=4.5e-24  Score=171.79  Aligned_cols=162  Identities=23%  Similarity=0.328  Sum_probs=110.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      +++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++......     .....++..|++||.+.+ ..+
T Consensus       122 ~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~  193 (343)
T cd07851         122 FLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHY  193 (343)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccccccccc-----ccCCcccccccCHHHHhCCCCC
Confidence            57899999999999998   999999999999999999999999998753221     122345778999998765 367


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchh-hchh---h-hhh--hhhhhhhh---cccccCCCC---CHHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV-SWSR---P-FLK--DQKKFVHL---VDPLLHGRY---PRRCLNY  147 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~-~~~~---~-~~~--~~~~~~~~---~~~~~~~~~---~~~~~~~  147 (213)
                      +.++|+||+|+++|++++|..||............ ....   . ...  ........   +.......+   .......
T Consensus       194 ~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  273 (343)
T cd07851         194 NQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPL  273 (343)
T ss_pred             CchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHH
Confidence            88999999999999999999999643221110000 0000   0 000  00000001   111111111   1123567


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      +.+++.+||+.+|++|||+.+|++
T Consensus       274 l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         274 AIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             HHHHHHHhCCCChhhCCCHHHHhc
Confidence            899999999999999999999975


No 366
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.90  E-value=7.1e-24  Score=165.37  Aligned_cols=149  Identities=28%  Similarity=0.398  Sum_probs=113.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC------------------cccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT------------------HVSTRV   63 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~------------------~~~~~~   63 (213)
                      .++.|++.||.+||+.+   ++|+||+|+||+++.++.++++|||++.........                  ......
T Consensus       106 ~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (280)
T cd05581         106 FYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASF  182 (280)
T ss_pred             HHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccc
Confidence            57899999999999998   999999999999999999999999998754332210                  112234


Q ss_pred             cccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHH
Q 028134           64 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRR  143 (213)
Q Consensus        64 ~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (213)
                      .++..|++||......++.++|+|++|++++++++|..||......                .....+..  .....+..
T Consensus       183 ~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----------------~~~~~~~~--~~~~~~~~  244 (280)
T cd05581         183 VGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY----------------LTFQKILK--LEYSFPPN  244 (280)
T ss_pred             cCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH----------------HHHHHHHh--cCCCCCCc
Confidence            5678899999888878889999999999999999999998633210                00111111  11123344


Q ss_pred             HHHHHHHHHHhhcCcCCCCCCCH----HHHHH
Q 028134          144 CLNYAVAVTAMCLNEEANFRPLI----NDIVV  171 (213)
Q Consensus       144 ~~~~~~~li~~cl~~~p~~Rps~----~ev~~  171 (213)
                      ....+.+++..||+.+|.+||++    .++++
T Consensus       245 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         245 FPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             cCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            56778999999999999999999    77653


No 367
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.90  E-value=4.2e-24  Score=171.63  Aligned_cols=147  Identities=31%  Similarity=0.408  Sum_probs=118.8

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL   82 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~   82 (213)
                      ++..+++|++|||.++   |++|||||+|++++.+|-+||.|||++.....+.   ....+.||+.|.|||.+.+..-+.
T Consensus       525 ~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~---KTwTFcGTpEYVAPEIILnKGHD~  598 (732)
T KOG0614|consen  525 YVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR---KTWTFCGTPEYVAPEIILNKGHDR  598 (732)
T ss_pred             hHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccCC---ceeeecCCcccccchhhhccCcch
Confidence            4568899999999999   9999999999999999999999999998764443   345688999999999999999999


Q ss_pred             ccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCCC
Q 028134           83 KSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANF  162 (213)
Q Consensus        83 ~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  162 (213)
                      +.|.|+||+++||+++|.+||.........             ..+..-+|.   -.+|........++|+..+..+|.+
T Consensus       599 avDyWaLGIli~ELL~G~pPFs~~dpmktY-------------n~ILkGid~---i~~Pr~I~k~a~~Lik~LCr~~P~E  662 (732)
T KOG0614|consen  599 AVDYWALGILIYELLTGSPPFSGVDPMKTY-------------NLILKGIDK---IEFPRRITKTATDLIKKLCRDNPTE  662 (732)
T ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCchHHHH-------------HHHHhhhhh---hhcccccchhHHHHHHHHHhcCcHh
Confidence            999999999999999999999755443221             111222222   2346677778899999999999999


Q ss_pred             CCC-----HHHHHH
Q 028134          163 RPL-----INDIVV  171 (213)
Q Consensus       163 Rps-----~~ev~~  171 (213)
                      |..     +.+|.+
T Consensus       663 RLG~~~~gI~DIkk  676 (732)
T KOG0614|consen  663 RLGYQKGGINDIKK  676 (732)
T ss_pred             hhccccCChHHHHh
Confidence            965     555554


No 368
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.90  E-value=1.4e-23  Score=169.15  Aligned_cols=162  Identities=23%  Similarity=0.303  Sum_probs=110.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++.....     ......++..|++||...+ ..+
T Consensus       124 ~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~  195 (345)
T cd07877         124 FLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHY  195 (345)
T ss_pred             HHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEEecccccccccc-----cccccccCCCccCHHHHhCccCC
Confidence            47899999999999998   99999999999999999999999999875321     1122356778999998765 467


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchh-hch-------hhhhhhhhhhhhh---cccccCCCC---CHHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV-SWS-------RPFLKDQKKFVHL---VDPLLHGRY---PRRCLN  146 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~  146 (213)
                      +.++|+||+||++|++++|..||...........+ ...       ..... .......   +.......+   ......
T Consensus       196 ~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (345)
T cd07877         196 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS-SESARNYIQSLTQMPKMNFANVFIGANP  274 (345)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcc-cHhHHHHHHHhcccCCcchhhhcCCCCH
Confidence            88999999999999999999998543221110000 000       00000 0000000   000000000   012356


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHHH
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                      .+.++|.+||+.+|.+||++.+++..
T Consensus       275 ~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         275 LAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            78899999999999999999999863


No 369
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.90  E-value=1.2e-23  Score=168.80  Aligned_cols=164  Identities=23%  Similarity=0.231  Sum_probs=110.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCC------------Ccccccccccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDN------------THVSTRVMGTYGY   69 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~------------~~~~~~~~~~~~~   69 (213)
                      .++.|++.||+|||+.+   ++|+||+++||+++.++.++|+|||.+........            ........++..|
T Consensus       123 ~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y  199 (335)
T PTZ00024        123 CILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWY  199 (335)
T ss_pred             HHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCC
Confidence            57899999999999998   99999999999999999999999999875431100            0111122356789


Q ss_pred             cCccccccC-CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhh--hhhhhhh--------cccccCC
Q 028134           70 CAPEYAMSG-KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKD--QKKFVHL--------VDPLLHG  138 (213)
Q Consensus        70 ~~Pe~~~~~-~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--------~~~~~~~  138 (213)
                      ++||.+.+. .++.++|+||+||++|++++|..||..........   ........  .......        .......
T Consensus       200 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (335)
T PTZ00024        200 RAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLG---RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPK  276 (335)
T ss_pred             CCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHhCCCchhhCcchhhcccccccCcCCcc
Confidence            999988754 46889999999999999999999996443211100   00000000  0000000        0000000


Q ss_pred             ---CCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          139 ---RYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       139 ---~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                         .....+...+.+++..||+.+|++||++++++.
T Consensus       277 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        277 DLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             cHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence               001123567889999999999999999999984


No 370
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.90  E-value=9.5e-24  Score=169.85  Aligned_cols=167  Identities=23%  Similarity=0.292  Sum_probs=109.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC-CCceEEeeeecccccCCCCCC-cccccccccccccCcccccc-C
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN-DFNPKLSDFGLAKLGPVGDNT-HVSTRVMGTYGYCAPEYAMS-G   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~-~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~-~   78 (213)
                      .++.|++.||.|||+.+   ++|+||||+||+++. ++.++++|||.+......... .......++..|+|||.+.+ .
T Consensus       118 ~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  194 (342)
T cd07854         118 LFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPN  194 (342)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCcc
Confidence            47899999999999998   999999999999974 567899999998653221111 11122346778999997654 4


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhh--hhh----hhhhhcc-cccCCC-----CCHHHHH
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLK--DQK----KFVHLVD-PLLHGR-----YPRRCLN  146 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~-~~~~~~-----~~~~~~~  146 (213)
                      .++.++|+|||||++|++++|..||................+...  ...    ....... ......     .......
T Consensus       195 ~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (342)
T cd07854         195 NYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNP  274 (342)
T ss_pred             ccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCH
Confidence            577899999999999999999999964332111100000000000  000    0000000 000000     0112456


Q ss_pred             HHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          147 YAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       147 ~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ++.+++..||..+|++||++.+++.
T Consensus       275 ~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         275 EALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             HHHHHHHHHhCCCchhccCHHHHhC
Confidence            7889999999999999999999984


No 371
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.89  E-value=2.5e-23  Score=158.38  Aligned_cols=148  Identities=30%  Similarity=0.372  Sum_probs=112.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      +++.+++.++.+||+.+   ++|+||+|.||+++.++.++++|||.+.......   ......++..|++||...+..++
T Consensus        91 ~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~  164 (244)
T smart00220       91 FYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVLLGKGYG  164 (244)
T ss_pred             HHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCCCHHHHccCCCC
Confidence            57899999999999998   9999999999999999999999999987643321   22234567789999998877888


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHH--HHHHHHHHHHhhcCcC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRR--CLNYAVAVTAMCLNEE  159 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~cl~~~  159 (213)
                      .++|+|++|++++++++|..||......                ....+.+...........  +...+.+++.+||..+
T Consensus       165 ~~~Di~slG~~l~~l~~~~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  228 (244)
T smart00220      165 KAVDVWSLGVILYELLTGKPPFPGDDQL----------------LELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKD  228 (244)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCcH----------------HHHHHHHhccCCCCccccccCCHHHHHHHHHHccCC
Confidence            9999999999999999999998632111                111111111111111111  5568999999999999


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      |++||++.++++
T Consensus       229 p~~Rp~~~~~~~  240 (244)
T smart00220      229 PEKRLTAEEALQ  240 (244)
T ss_pred             chhccCHHHHhh
Confidence            999999999985


No 372
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89  E-value=7.1e-24  Score=157.30  Aligned_cols=168  Identities=24%  Similarity=0.292  Sum_probs=116.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCC--CCcccccccccccccCccccccC-
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGD--NTHVSTRVMGTYGYCAPEYAMSG-   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~Pe~~~~~-   78 (213)
                      +++.+++.||.|+|...   |+|||+|+.|++++.+|.++|+|||+++.+....  .........-|.+|++||.+.+. 
T Consensus       128 k~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r  204 (376)
T KOG0669|consen  128 KVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDR  204 (376)
T ss_pred             HHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhccc
Confidence            57899999999999987   9999999999999999999999999997543322  12223345668999999999865 


Q ss_pred             CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhh-----hhh--hhhhhhhc--ccccCCCC--------C
Q 028134           79 KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPF-----LKD--QKKFVHLV--DPLLHGRY--------P  141 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~--~~~~~~~~--------~  141 (213)
                      .+..+.|+|..|||+.||+++.+.+.+..+......+...-..     +++  .-.+.+.+  .+...+.+        +
T Consensus       205 ~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp  284 (376)
T KOG0669|consen  205 EYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKP  284 (376)
T ss_pred             ccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhccc
Confidence            6789999999999999999999888654433322222100000     000  01111111  11111100        1


Q ss_pred             HHHHHHHHHHHHhhcCcCCCCCCCHHHHHHH
Q 028134          142 RRCLNYAVAVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       142 ~~~~~~~~~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                      -.-.++..+++..++..||.+|+++.+++..
T Consensus       285 ~~kd~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  285 YVKDDEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             ccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence            1224578899999999999999999988764


No 373
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89  E-value=4.2e-23  Score=165.01  Aligned_cols=110  Identities=18%  Similarity=0.225  Sum_probs=87.3

Q ss_pred             cccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchh---------------------hchhh
Q 028134           62 RVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLV---------------------SWSRP  120 (213)
Q Consensus        62 ~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~---------------------~~~~~  120 (213)
                      ..+.|..|++||++.+.+|+..+||||++|++|||.||.+.|+.+...+...-.                     .+.+.
T Consensus       410 ~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRd  489 (590)
T KOG1290|consen  410 EDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRD  489 (590)
T ss_pred             hhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHh
Confidence            346688999999999999999999999999999999999999876555432211                     14456


Q ss_pred             hhhhhhhhhhhcccccCC---------CCCHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          121 FLKDQKKFVHLVDPLLHG---------RYPRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ++...+.+..+-.-..++         .++.+...+|.+++.-||+.+|++|||+.++++
T Consensus       490 FFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~  549 (590)
T KOG1290|consen  490 FFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK  549 (590)
T ss_pred             hhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence            666666666665443333         357788899999999999999999999999984


No 374
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89  E-value=1.7e-23  Score=160.40  Aligned_cols=145  Identities=28%  Similarity=0.400  Sum_probs=114.8

Q ss_pred             HHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCCc
Q 028134            4 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK   83 (213)
Q Consensus         4 ~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~   83 (213)
                      -..|+.||.|||+++   ||+||+|.+|.+++.+|.+|++|||++...  .........+.||+.|+|||++....|.++
T Consensus       274 GaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~--I~~g~t~kTFCGTPEYLAPEVleDnDYgra  348 (516)
T KOG0690|consen  274 GAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEE--IKYGDTTKTFCGTPEYLAPEVLEDNDYGRA  348 (516)
T ss_pred             hHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhc--ccccceeccccCChhhcCchhhccccccce
Confidence            357899999999998   999999999999999999999999998742  222334556899999999999999999999


Q ss_pred             cceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCCCC
Q 028134           84 SDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFR  163 (213)
Q Consensus        84 ~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  163 (213)
                      .|.|.+|+++|||++|+.||-...                 ...+.+++--. ...+|....++...++...|..||.+|
T Consensus       349 VDWWG~GVVMYEMmCGRLPFyn~d-----------------h~kLFeLIl~e-d~kFPr~ls~eAktLLsGLL~kdP~kR  410 (516)
T KOG0690|consen  349 VDWWGVGVVMYEMMCGRLPFYNKD-----------------HEKLFELILME-DLKFPRTLSPEAKTLLSGLLKKDPKKR  410 (516)
T ss_pred             eehhhhhHHHHHHHhccCcccccc-----------------hhHHHHHHHhh-hccCCccCCHHHHHHHHHHhhcChHhh
Confidence            999999999999999999995221                 22233322110 123566777888899999999999999


Q ss_pred             C-----CHHHHHH
Q 028134          164 P-----LINDIVV  171 (213)
Q Consensus       164 p-----s~~ev~~  171 (213)
                      .     .++||.+
T Consensus       411 LGgGpdDakEi~~  423 (516)
T KOG0690|consen  411 LGGGPDDAKEIMR  423 (516)
T ss_pred             cCCCchhHHHHHh
Confidence            4     3555554


No 375
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.89  E-value=5.1e-23  Score=161.77  Aligned_cols=152  Identities=27%  Similarity=0.343  Sum_probs=109.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC--C
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG--K   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~--~   79 (213)
                      .++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........ .......++..|++||.+...  .
T Consensus       109 ~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~  184 (290)
T cd05613         109 IYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV-ERAYSFCGTIEYMAPDIVRGGDGG  184 (290)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceecccccc-cccccccCCcccCChhhccCCCCC
Confidence            35679999999999998   99999999999999999999999999875422211 112234567889999987643  4


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      ++.+.|+||+|+++|++++|..||.........             ..+...+... ...++..+...+.+++.+||..+
T Consensus       185 ~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~l~~~  250 (290)
T cd05613         185 HDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ-------------AEISRRILKS-EPPYPQEMSALAKDIIQRLLMKD  250 (290)
T ss_pred             CCccccHHHHHHHHHHHhcCCCCCCcCCccccH-------------HHHHHHhhcc-CCCCCccCCHHHHHHHHHHhcCC
Confidence            578899999999999999999998632211110             0111111111 11234456678899999999999


Q ss_pred             CCCCC-----CHHHHHH
Q 028134          160 ANFRP-----LINDIVV  171 (213)
Q Consensus       160 p~~Rp-----s~~ev~~  171 (213)
                      |++||     ++.+++.
T Consensus       251 p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         251 PKKRLGCGPSDADEIKK  267 (290)
T ss_pred             HHHhcCCCCCCHHHHHc
Confidence            99997     6676654


No 376
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.89  E-value=3e-23  Score=166.11  Aligned_cols=161  Identities=23%  Similarity=0.355  Sum_probs=110.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.||+|||+.+   ++|+||+|.||+++.++.++|+|||.+.....     ......++..|++||.+.+ ..+
T Consensus       112 ~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~  183 (328)
T cd07856         112 YFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARIQDP-----QMTGYVSTRYYRAPEIMLTWQKY  183 (328)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccccCC-----CcCCCcccccccCceeeeccCCc
Confidence            46789999999999998   99999999999999999999999998864311     1122345678999998765 567


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhh---------chhhhhhhhhhhhhhccc-ccCCCCC-----HHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVS---------WSRPFLKDQKKFVHLVDP-LLHGRYP-----RRCL  145 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~  145 (213)
                      +.++|+|++|+++|++++|..||.............         +...... . .....+.. ......+     ..+.
T Consensus       184 ~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~  261 (328)
T cd07856         184 DVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICS-E-NTLRFVQSLPKREPVPFSEKFKNAD  261 (328)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccc-h-hhHHHHhhccccCCCcHHHHcCCCC
Confidence            899999999999999999999996433211100000         0000000 0 00001100 0011111     1245


Q ss_pred             HHHHHHHHhhcCcCCCCCCCHHHHHHH
Q 028134          146 NYAVAVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       146 ~~~~~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                      ..+.++|.+||+.+|++||++.+++..
T Consensus       262 ~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         262 PSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            689999999999999999999999763


No 377
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.89  E-value=3e-23  Score=174.59  Aligned_cols=159  Identities=26%  Similarity=0.362  Sum_probs=132.7

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      |.|++||++|+.|||.+.   +|||||.+.|||+..-..+|+.|||+++...............-...|++-|.++...+
T Consensus       801 Lnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~  877 (1177)
T KOG1025|consen  801 LNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKY  877 (1177)
T ss_pred             HHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCC
Confidence            478999999999999998   99999999999999999999999999987655444443333444667899999999999


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      +.++|||+|||.+||++| |..||++-.                 ..++.+++...-+...|..|...+.-+|.+||..|
T Consensus       878 thqSDVWsfGVtiWElmTFGa~Py~gi~-----------------~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid  940 (1177)
T KOG1025|consen  878 THQSDVWSFGVTIWELMTFGAKPYDGIP-----------------AEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMID  940 (1177)
T ss_pred             CchhhhhhhhhhHHHHHhcCCCccCCCC-----------------HHHhhHHHhccccCCCCCCccHHHHHHHHHHhccC
Confidence            999999999999999986 888886221                 34555566665566678889999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHhhc
Q 028134          160 ANFRPLINDIVVALDYLVSQ  179 (213)
Q Consensus       160 p~~Rps~~ev~~~L~~l~~~  179 (213)
                      +..||+++++...+....+.
T Consensus       941 ~~~rp~fkel~~~fs~~ard  960 (1177)
T KOG1025|consen  941 ADSRPTFKELAEEFSRMARD  960 (1177)
T ss_pred             cccCccHHHHHHHHHHHhcC
Confidence            99999999999998877653


No 378
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.89  E-value=7.2e-24  Score=178.34  Aligned_cols=150  Identities=31%  Similarity=0.445  Sum_probs=111.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC---C--CceEEeeeecccccCCCCCC-cccccccccccccCcccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---D--FNPKLSDFGLAKLGPVGDNT-HVSTRVMGTYGYCAPEYA   75 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~---~--~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   75 (213)
                      .++.|+++||++||+.+   ||||||||+||||+.   +  ..++|+|||++.....+... .......|+..|.|||.+
T Consensus       610 ~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L  686 (903)
T KOG1027|consen  610 SVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQL  686 (903)
T ss_pred             HHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHH
Confidence            46789999999999998   999999999999965   3  46789999999876544332 223445789999999999


Q ss_pred             ccCCCCCccceeeHHHHHHHHHhC-CCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHh
Q 028134           76 MSGKLTLKSDIYSFGVVLLELITG-RKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM  154 (213)
Q Consensus        76 ~~~~~~~~~Di~slG~~~~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  154 (213)
                      .......+.||||+|||+|+.++| ..||.......        .+.+..+..+..+       ....++  +..++|.+
T Consensus       687 ~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--------~NIl~~~~~L~~L-------~~~~d~--eA~dLI~~  749 (903)
T KOG1027|consen  687 REDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--------ANILTGNYTLVHL-------EPLPDC--EAKDLISR  749 (903)
T ss_pred             hccccCcccchhhcCceEEEEecCCccCCCchHHhh--------hhhhcCccceeee-------ccCchH--HHHHHHHH
Confidence            988888999999999999999886 78885222111        1111111111111       011122  78999999


Q ss_pred             hcCcCCCCCCCHHHHHH
Q 028134          155 CLNEEANFRPLINDIVV  171 (213)
Q Consensus       155 cl~~~p~~Rps~~ev~~  171 (213)
                      |++.+|..||++.+|+.
T Consensus       750 ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  750 MLNPDPQLRPSATDVLN  766 (903)
T ss_pred             hcCCCcccCCCHHHHhC
Confidence            99999999999999974


No 379
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.89  E-value=2.5e-23  Score=167.50  Aligned_cols=167  Identities=23%  Similarity=0.319  Sum_probs=113.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-CCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-GKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~   80 (213)
                      .++.|++.||+|||+.+   ++|+||+|+||+++.++.++++|||++......     .....++..|++||.+.+ ..+
T Consensus       122 ~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~  193 (343)
T cd07880         122 FLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHY  193 (343)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccccccccC-----ccccccCCcccCHHHHhCCCCC
Confidence            57899999999999998   999999999999999999999999998753221     122345778999998775 357


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccc-hhh--------chhhhhhhhhhhhhhcc---cccCC---CCCHHHH
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQN-LVS--------WSRPFLKDQKKFVHLVD---PLLHG---RYPRRCL  145 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~  145 (213)
                      +.++|+||+|+++|++++|..||.......... ...        +... +. .......+.   .....   .....+.
T Consensus       194 ~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (343)
T cd07880         194 TQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQK-LQ-SEDAKNYVKKLPRFRKKDFRSLLPNAN  271 (343)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh-hc-chhHHHHHHhccccCcchHHHhccCCC
Confidence            889999999999999999999996432111000 000        0000 00 000000000   00000   0112345


Q ss_pred             HHHHHHHHhhcCcCCCCCCCHHHHHH--HHHHHhh
Q 028134          146 NYAVAVTAMCLNEEANFRPLINDIVV--ALDYLVS  178 (213)
Q Consensus       146 ~~~~~li~~cl~~~p~~Rps~~ev~~--~L~~l~~  178 (213)
                      ..+.+++.+|++.||++||++.+++.  .++....
T Consensus       272 ~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~  306 (343)
T cd07880         272 PLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD  306 (343)
T ss_pred             hHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence            56889999999999999999999984  5555433


No 380
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88  E-value=2.8e-23  Score=155.93  Aligned_cols=167  Identities=23%  Similarity=0.269  Sum_probs=119.4

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KLT   81 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~   81 (213)
                      +++||++||.|||+.+   |+||||||-|.+++.|..+|+||||+++....... .......-|.-|++||.+.+. .|+
T Consensus       161 FlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~-~hMTqEVVTQYYRAPEiLMGaRhYs  236 (449)
T KOG0664|consen  161 FVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR-LNMTHEVVTQYYRAPELLMGARRYT  236 (449)
T ss_pred             hHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccchhhh-hhhHHHHHHHHhccHHHhhcchhhc
Confidence            5799999999999999   99999999999999999999999999985322221 112234456789999999864 789


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchh-------hhhhhhhhhhhhcccccCCC---------CCHHHH
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR-------PFLKDQKKFVHLVDPLLHGR---------YPRRCL  145 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~---------~~~~~~  145 (213)
                      .+.||||.|||+.|++..+..|.-........++....       .-...++....++....+..         -+....
T Consensus       237 ~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~  316 (449)
T KOG0664|consen  237 GAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKN  316 (449)
T ss_pred             CccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccc
Confidence            99999999999999999888886555444333222111       00123344444444333321         112334


Q ss_pred             HHHHHHHHhhcCcCCCCCCCHHHHHHHH
Q 028134          146 NYAVAVTAMCLNEEANFRPLINDIVVAL  173 (213)
Q Consensus       146 ~~~~~li~~cl~~~p~~Rps~~ev~~~L  173 (213)
                      .+...+.+.++..+|++|.+.++.+..+
T Consensus       317 heav~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  317 HEAVDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             hHHHHHHHHHhCCCCcccccHhhhcccc
Confidence            5667788889999999999998887653


No 381
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88  E-value=1.6e-22  Score=159.31  Aligned_cols=140  Identities=31%  Similarity=0.430  Sum_probs=113.6

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL   82 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~   82 (213)
                      ++..|+-||-|||+++   |++||||.+||+++..|.+||+|||++..--  -.......+.||+.|+|||.+...+|..
T Consensus       455 YAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni--~~~~TTkTFCGTPdYiAPEIi~YqPYgk  529 (683)
T KOG0696|consen  455 YAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI--FDGVTTKTFCGTPDYIAPEIIAYQPYGK  529 (683)
T ss_pred             hhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccccccc--cCCcceeeecCCCcccccceEEeccccc
Confidence            5678999999999999   9999999999999999999999999987421  1122345678999999999999999999


Q ss_pred             ccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCCC
Q 028134           83 KSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANF  162 (213)
Q Consensus        83 ~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  162 (213)
                      +.|.|++|+++|||+.|++||++..+...                ...+.+..  ..+|.....+..+++...+..+|.+
T Consensus       530 svDWWa~GVLLyEmlaGQpPFdGeDE~el----------------F~aI~ehn--vsyPKslSkEAv~ickg~ltK~P~k  591 (683)
T KOG0696|consen  530 SVDWWAFGVLLYEMLAGQPPFDGEDEDEL----------------FQAIMEHN--VSYPKSLSKEAVAICKGLLTKHPGK  591 (683)
T ss_pred             chhHHHHHHHHHHHHcCCCCCCCCCHHHH----------------HHHHHHcc--CcCcccccHHHHHHHHHHhhcCCcc
Confidence            99999999999999999999985443221                11222222  2457777888999999999999999


Q ss_pred             CCC
Q 028134          163 RPL  165 (213)
Q Consensus       163 Rps  165 (213)
                      |..
T Consensus       592 RLG  594 (683)
T KOG0696|consen  592 RLG  594 (683)
T ss_pred             ccC
Confidence            953


No 382
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.88  E-value=8e-24  Score=157.92  Aligned_cols=148  Identities=27%  Similarity=0.346  Sum_probs=110.2

Q ss_pred             HHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc--cCCCC
Q 028134            4 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM--SGKLT   81 (213)
Q Consensus         4 ~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~--~~~~~   81 (213)
                      ....++||.||...-+  |+|||+||+|||++..|.+||||||.+....   ..-......|...|+|||.+.  +..++
T Consensus       173 tvatV~AL~yLK~~lk--iIHRDvKPSNILldr~G~vKLCDFGIcGqLv---~SiAkT~daGCrpYmAPERi~p~~~gyD  247 (361)
T KOG1006|consen  173 TVATVDALDYLKEELK--IIHRDVKPSNILLDRHGDVKLCDFGICGQLV---DSIAKTVDAGCRPYMAPERIDPSDKGYD  247 (361)
T ss_pred             eeeehhHHHHHHHHhh--hhhccCChhheEEecCCCEeeecccchHhHH---HHHHhhhccCCccccChhccCCccCCcc
Confidence            3456789999987654  9999999999999999999999999975421   111233345778899999886  33588


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhccc---ccCCCC-CHHHHHHHHHHHHhhcC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDP---LLHGRY-PRRCLNYAVAVTAMCLN  157 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~li~~cl~  157 (213)
                      -++|+||||+.++|+.+|..||..+...               -.++..++..   .+.... .......+..+|..|+.
T Consensus       248 iRSDvWSLGITL~EvAtG~fPyr~w~sv---------------feql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~  312 (361)
T KOG1006|consen  248 IRSDVWSLGITLYEVATGNFPYRKWDSV---------------FEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLI  312 (361)
T ss_pred             hhhhhhhhcceEeeeecCCCCcchHHHH---------------HHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhh
Confidence            9999999999999999999999743321               1233333321   111111 12466789999999999


Q ss_pred             cCCCCCCCHHHHHH
Q 028134          158 EEANFRPLINDIVV  171 (213)
Q Consensus       158 ~~p~~Rps~~ev~~  171 (213)
                      .|...||+..++.+
T Consensus       313 Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  313 KDRSDRPKYDDLKK  326 (361)
T ss_pred             cccccCcchhhhhc
Confidence            99999999999876


No 383
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.88  E-value=3.3e-22  Score=158.92  Aligned_cols=154  Identities=27%  Similarity=0.436  Sum_probs=112.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeC---CCCceEEeeeecccccCCCCCC-----cccccccccccccCcc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLD---NDFNPKLSDFGLAKLGPVGDNT-----HVSTRVMGTYGYCAPE   73 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~---~~~~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~Pe   73 (213)
                      .|++||+.||.||... ++||+|-||||.|||+.   ..|.+||.|||++.........     .......||+||++||
T Consensus       572 SIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPE  650 (775)
T KOG1151|consen  572 SIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPE  650 (775)
T ss_pred             HHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcc
Confidence            5789999999999988 78899999999999993   4688999999999876443332     2234567999999999


Q ss_pred             ccccC----CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCC--CHHHHHH
Q 028134           74 YAMSG----KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRY--PRRCLNY  147 (213)
Q Consensus        74 ~~~~~----~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  147 (213)
                      ++.-.    +.+.+.||||+|||+|.++.|+.||....  ..+.++.        ...   +++ .....+  ......+
T Consensus       651 cFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnq--sQQdILq--------eNT---Ilk-AtEVqFP~KPvVsse  716 (775)
T KOG1151|consen  651 CFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ--SQQDILQ--------ENT---ILK-ATEVQFPPKPVVSSE  716 (775)
T ss_pred             eeecCCCCCccccceeeEeeehhhhhhhccCCCCCCch--hHHHHHh--------hhc---hhc-ceeccCCCCCccCHH
Confidence            88744    45789999999999999999999996221  1111111        000   111 111112  2345667


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIV  170 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~  170 (213)
                      ..++|++||.+.-++|.+..++.
T Consensus       717 AkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  717 AKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             HHHHHHHHHHhhhhhhhhHHHHc
Confidence            89999999999999997766654


No 384
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.87  E-value=1.7e-23  Score=159.02  Aligned_cols=148  Identities=26%  Similarity=0.308  Sum_probs=118.5

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL   82 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~   82 (213)
                      ++...++||.|||...   -+|||||+-|||++.+|..||+|||.+....+.  -......+||+.|++||++..-.|..
T Consensus       134 iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVI~EIGY~~  208 (502)
T KOG0574|consen  134 VLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIEEIGYDT  208 (502)
T ss_pred             HHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhh--HHhhCccccCcccccHHHHHHhccch
Confidence            5678899999999887   799999999999999999999999998754332  22344578999999999999999999


Q ss_pred             ccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhh-cccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           83 KSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHL-VDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        83 ~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .+||||||+...||..|++||..-......                .-+ -++.....-|+....++.++++.||-.+|+
T Consensus       209 ~ADIWSLGITaIEMAEG~PPYsDIHPMRAI----------------FMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE  272 (502)
T KOG0574|consen  209 KADIWSLGITAIEMAEGRPPYSDIHPMRAI----------------FMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPE  272 (502)
T ss_pred             hhhHhhhcchhhhhhcCCCCccccccccee----------------EeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHH
Confidence            999999999999999999999733332211                001 011111223677888999999999999999


Q ss_pred             CCCCHHHHHH
Q 028134          162 FRPLINDIVV  171 (213)
Q Consensus       162 ~Rps~~ev~~  171 (213)
                      +|.|+..+++
T Consensus       273 ~R~TA~~L~~  282 (502)
T KOG0574|consen  273 ERKTALRLCE  282 (502)
T ss_pred             HHHHHHHHhh
Confidence            9999998876


No 385
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.87  E-value=2.8e-22  Score=152.91  Aligned_cols=164  Identities=26%  Similarity=0.326  Sum_probs=116.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      ++.+|++.|++|||+.+   |+||||||+||++..++.+|+.|||++......   ........+.-|+|||++.+..+.
T Consensus       122 ~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~---~~mtpyVvtRyyrapevil~~~~k  195 (369)
T KOG0665|consen  122 YILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD---FMMTPYVVTRYYRAPEVILGMGYK  195 (369)
T ss_pred             HHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhcccCcc---cccCchhheeeccCchheeccCCc
Confidence            47899999999999999   999999999999999999999999999753221   123335567789999999998999


Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccc------------hhh----chhhhhhhhhh-----hhhhc-ccccCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQN------------LVS----WSRPFLKDQKK-----FVHLV-DPLLHGR  139 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~------------~~~----~~~~~~~~~~~-----~~~~~-~~~~~~~  139 (213)
                      ...||||+||++.||+.|...|.+....+...            +.+    -.+.+.....+     ..+.+ |-.+...
T Consensus       196 e~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~  275 (369)
T KOG0665|consen  196 ENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVV  275 (369)
T ss_pred             ccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCccccccc
Confidence            99999999999999999998886443222211            111    11111110000     00001 1111111


Q ss_pred             C--CHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          140 Y--PRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       140 ~--~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      .  +.-....+.+++.+||-.+|++|-++++++.
T Consensus       276 ~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~  309 (369)
T KOG0665|consen  276 LEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR  309 (369)
T ss_pred             ccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence            1  1133456788999999999999999999986


No 386
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.87  E-value=1.2e-22  Score=166.29  Aligned_cols=146  Identities=26%  Similarity=0.317  Sum_probs=116.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC-
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL-   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-   80 (213)
                      .++.|++.|++|+|+++   |+|||||++|++++.+..+||+|||++..+.   .........|.+.|.|||+..+.++ 
T Consensus       159 ~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~---~~~~lqt~cgsppyAaPEl~~g~~y~  232 (596)
T KOG0586|consen  159 AKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFD---YGLMLQTFCGSPPYAAPELFNGKKYD  232 (596)
T ss_pred             hhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeec---ccccccccCCCCCccChHhhcCcccC
Confidence            36789999999999999   9999999999999999999999999998753   2233456788999999999988776 


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCC
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEA  160 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  160 (213)
                      ....|+|++|+++|-++.|..||++........                ..+....+  ++.-+..+..++++.++-.+|
T Consensus       233 gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~----------------rvl~gk~r--Ip~~ms~dce~lLrk~lvl~P  294 (596)
T KOG0586|consen  233 GPEVDIWSLGVVLYALVEGSLPFDGQNLKELRP----------------RVLRGKYR--IPFYMSCDCEDLLRKFLVLNP  294 (596)
T ss_pred             CcceehhhhhhhheeeeecccccCCcccccccc----------------hheeeeec--ccceeechhHHHHHHhhccCc
Confidence            488999999999999999999998554433221                11111111  233344567788999999999


Q ss_pred             CCCCCHHHHHH
Q 028134          161 NFRPLINDIVV  171 (213)
Q Consensus       161 ~~Rps~~ev~~  171 (213)
                      .+|+++++|.+
T Consensus       295 skr~~~dqim~  305 (596)
T KOG0586|consen  295 SKRGPCDQIMK  305 (596)
T ss_pred             cccCCHHHhhh
Confidence            99999999976


No 387
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.86  E-value=1.8e-21  Score=168.55  Aligned_cols=147  Identities=26%  Similarity=0.346  Sum_probs=109.2

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc-----
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS-----   77 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-----   77 (213)
                      ++..|+.||.-||+-|   +|||||||+|||++..|.++|+|||.+-.....+ .-......||+.|.+||++..     
T Consensus       180 Y~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGsClkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~  255 (1317)
T KOG0612|consen  180 YTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGK  255 (1317)
T ss_pred             HHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchhHHhcCCCC-cEEeccccCCCCccCHHHHHhhcCCc
Confidence            4578899999999999   9999999999999999999999999876543222 223445789999999999873     


Q ss_pred             CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCC--HHHHHHHHHHHHhh
Q 028134           78 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYP--RRCLNYAVAVTAMC  155 (213)
Q Consensus        78 ~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~c  155 (213)
                      +.|....|.||+|+++|||+.|..||--..             .....+.+...-+.   ..+|  ...+.+..++|+..
T Consensus       256 g~yG~ecDwWSlGV~~YEMlyG~TPFYads-------------lveTY~KIm~hk~~---l~FP~~~~VSeeakdLI~~l  319 (1317)
T KOG0612|consen  256 GEYGRECDWWSLGVFMYEMLYGETPFYADS-------------LVETYGKIMNHKES---LSFPDETDVSEEAKDLIEAL  319 (1317)
T ss_pred             cccCCccchhhhHHHHHHHHcCCCcchHHH-------------HHHHHHHHhchhhh---cCCCcccccCHHHHHHHHHH
Confidence            457889999999999999999999984111             11223333333111   1222  34677888999884


Q ss_pred             cCcCCCCCCC---HHHHH
Q 028134          156 LNEEANFRPL---INDIV  170 (213)
Q Consensus       156 l~~~p~~Rps---~~ev~  170 (213)
                      + -+|+.|-.   +.++.
T Consensus       320 l-~~~e~RLgrngiedik  336 (1317)
T KOG0612|consen  320 L-CDREVRLGRNGIEDIK  336 (1317)
T ss_pred             h-cChhhhcccccHHHHH
Confidence            4 47888877   77776


No 388
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.85  E-value=6.8e-22  Score=142.76  Aligned_cols=103  Identities=34%  Similarity=0.462  Sum_probs=84.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccccc----
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS----   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~----   77 (213)
                      +|+..++.|+.|||++-.  ++|||+||+|||++..|.+|+||||.+....+.   -......|...|+|||.+..    
T Consensus       152 kIa~Svv~al~~L~~kL~--vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS---iAkt~daGCkpYmaPEri~~e~n~  226 (282)
T KOG0984|consen  152 KIAVSVVHALEFLHSKLS--VIHRDVKPSNILINYDGQVKICDFGISGYLVDS---IAKTMDAGCKPYMAPERINPELNQ  226 (282)
T ss_pred             HhHHHHHHHHHHHHHHhh--hhhccCCcceEEEccCCcEEEcccccceeehhh---hHHHHhcCCCccCChhhcCcccCc
Confidence            578999999999998743  999999999999999999999999998653221   11223557788999998752    


Q ss_pred             CCCCCccceeeHHHHHHHHHhCCCCccccCCC
Q 028134           78 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQ  109 (213)
Q Consensus        78 ~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~  109 (213)
                      ..|+-++|+||||+.+.||.+++.||+...+.
T Consensus       227 ~gY~vksDvWSLGItmiElA~lr~PY~~w~tp  258 (282)
T KOG0984|consen  227 KGYSVKSDVWSLGITMIEMAILRFPYESWGTP  258 (282)
T ss_pred             ccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence            36889999999999999999999999854433


No 389
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.84  E-value=4.4e-21  Score=147.93  Aligned_cols=145  Identities=28%  Similarity=0.433  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCCc
Q 028134            4 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK   83 (213)
Q Consensus         4 ~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~   83 (213)
                      ...|+-||.|||++|   |++||||.+|++++..|.+||.|||.+..-  .........+.||+.|.|||.+++..|...
T Consensus       357 s~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~--l~~gd~tstfcgtpnyiapeilrgeeygfs  431 (593)
T KOG0695|consen  357 SAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEG--LGPGDTTSTFCGTPNYIAPEILRGEEYGFS  431 (593)
T ss_pred             hHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcC--CCCCcccccccCCCcccchhhhcccccCce
Confidence            356888999999999   999999999999999999999999998742  222344567899999999999999999999


Q ss_pred             cceeeHHHHHHHHHhCCCCccccCCCCc-cchhhchhhhhhhhhhhhhh-cccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           84 SDIYSFGVVLLELITGRKAMDLSKGQGE-QNLVSWSRPFLKDQKKFVHL-VDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        84 ~Di~slG~~~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      .|.|++|++++|||.|+.||+.-.-.+. ++-.          .-+.++ +.+.++  +|....-....+++.-|..||.
T Consensus       432 vdwwalgvlmfemmagrspfdivgm~n~d~nte----------dylfqvilekqir--iprslsvkas~vlkgflnkdp~  499 (593)
T KOG0695|consen  432 VDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTE----------DYLFQVILEKQIR--IPRSLSVKASHVLKGFLNKDPK  499 (593)
T ss_pred             ehHHHHHHHHHHHHcCCCCcceecCCCcccchh----------HHHHHHHhhhccc--ccceeehhhHHHHHHhhcCCcH
Confidence            9999999999999999999985432222 1111          112222 233222  3444555567788888999999


Q ss_pred             CCCC
Q 028134          162 FRPL  165 (213)
Q Consensus       162 ~Rps  165 (213)
                      +|..
T Consensus       500 erlg  503 (593)
T KOG0695|consen  500 ERLG  503 (593)
T ss_pred             HhcC
Confidence            8854


No 390
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.84  E-value=1.7e-21  Score=157.22  Aligned_cols=97  Identities=29%  Similarity=0.311  Sum_probs=81.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCC-CceEEeeeecccccCCCCCCcccccccccccccCccccccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND-FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~   80 (213)
                      .++.||.-||..|...+   |+|.||||+|||++.+ ..+||||||.+..........    ..-...|.|||++.+.+|
T Consensus       540 sYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitP----YLVSRFYRaPEIiLG~~y  612 (752)
T KOG0670|consen  540 SYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGSASFASENEITP----YLVSRFYRAPEIILGLPY  612 (752)
T ss_pred             HHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCccccccccccccH----HHHHHhccCcceeecCcc
Confidence            36789999999999999   9999999999999764 567999999987643333222    223457999999999999


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccc
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDL  105 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~  105 (213)
                      ++..|+||.||.+||+.+|+..|.+
T Consensus       613 d~~iD~WSvgctLYElYtGkIlFpG  637 (752)
T KOG0670|consen  613 DYPIDTWSVGCTLYELYTGKILFPG  637 (752)
T ss_pred             cCCccceeeceeeEEeeccceecCC
Confidence            9999999999999999999988854


No 391
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.83  E-value=6e-21  Score=135.41  Aligned_cols=164  Identities=21%  Similarity=0.245  Sum_probs=113.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCC-C
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-L   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~   80 (213)
                      +++.|+++|+.|.|+++   +.|||+||+|.+++.+|.+|++|||+++-++...  .......-|.+|++|.++.+.+ |
T Consensus       105 sfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipv--rcysaevvtlwyrppdvlfgakly  179 (292)
T KOG0662|consen  105 SFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLY  179 (292)
T ss_pred             HHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCce--EeeeceeeeeeccCcceeeeeehh
Confidence            46899999999999998   9999999999999999999999999998653322  2233456688999999998764 6


Q ss_pred             CCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhhhhhhhhhhhh---cccccCCCCC---------HHHHHH
Q 028134           81 TLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHL---VDPLLHGRYP---------RRCLNY  147 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---------~~~~~~  147 (213)
                      +...|+||.||++.|+.. |.+.|.+....++...+-+...... +.++..+   -|-...+.++         ......
T Consensus       180 ~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~-ed~wps~t~lpdyk~yp~ypattswsqivp~lns~  258 (292)
T KOG0662|consen  180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT-EDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNST  258 (292)
T ss_pred             ccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCc-cccCCccccCCCCcccCCccccchHHHHhhhhcch
Confidence            899999999999999975 5555654443333222222211111 1222111   1222222121         122234


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      -.++++..+.-+|.+|-++++.++
T Consensus       259 grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  259 GRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             hHHHHHHHhccCcccccCHHHHhc
Confidence            567888888889999999998765


No 392
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.83  E-value=1.2e-20  Score=163.56  Aligned_cols=93  Identities=19%  Similarity=0.269  Sum_probs=68.0

Q ss_pred             cccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhccccc-CCCCCH
Q 028134           64 MGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLL-HGRYPR  142 (213)
Q Consensus        64 ~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  142 (213)
                      .||..|++||++.+..++.++|||||||++|||++|..||......                .....++.... ......
T Consensus       541 vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~----------------~~~~~il~~~~~~p~~~~  604 (669)
T cd05610         541 LGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQ----------------QVFQNILNRDIPWPEGEE  604 (669)
T ss_pred             eeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH----------------HHHHHHHhcCCCCCcccc
Confidence            3478899999999888999999999999999999999998632111                11111111111 111122


Q ss_pred             HHHHHHHHHHHhhcCcCCCCCCCHHHHHHH
Q 028134          143 RCLNYAVAVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       143 ~~~~~~~~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                      .+...+.+++..||..+|.+||++.++++.
T Consensus       605 ~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         605 KLSVNAQNAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             cCCHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence            445678899999999999999999999874


No 393
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.83  E-value=1.8e-20  Score=155.82  Aligned_cols=177  Identities=24%  Similarity=0.243  Sum_probs=122.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeC--CCC--ceEEeeeecccccCCCCCCcccccccccccccCccccc-
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLD--NDF--NPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM-   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~--~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-   76 (213)
                      .++..++.|+.|||.++   |+||||||.||++-  .+|  ..||+|||.++...++.   ......||..|.+||... 
T Consensus       124 ~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~  197 (732)
T KOG4250|consen  124 DLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS---LFTSLVGTEEYLHPELYER  197 (732)
T ss_pred             HHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC---eeeeecCchhhcChHHHhh
Confidence            46788999999999998   99999999999982  223  45999999998653332   456688999999999888 


Q ss_pred             cCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccC------------CCCCHHH
Q 028134           77 SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLH------------GRYPRRC  144 (213)
Q Consensus        77 ~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~  144 (213)
                      ...|+...|.|||||++|++.+|..||..........-+.|...-.. .........+...            -......
T Consensus       198 q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkk-p~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l  276 (732)
T KOG4250|consen  198 QKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKK-PSGVAIGAQEEENGPVEWSSTLPQPNHLSRGL  276 (732)
T ss_pred             ccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccC-CCceeEeeecccCCceeeeccCCCcccccHHH
Confidence            47889999999999999999999999975443322111111110000 0111111111111            0122344


Q ss_pred             HHHHHHHHHhhcCcCCCCCC--CHHHHHHHHHHHhhccCCCcc
Q 028134          145 LNYAVAVTAMCLNEEANFRP--LINDIVVALDYLVSQRDSHPV  185 (213)
Q Consensus       145 ~~~~~~li~~cl~~~p~~Rp--s~~ev~~~L~~l~~~~~~~~~  185 (213)
                      ...+...+..+|..+|.+|.  ...++...+..+.+..-.+-.
T Consensus       277 ~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~vvhiF  319 (732)
T KOG4250|consen  277 ATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKVVHIF  319 (732)
T ss_pred             HhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhheeEEE
Confidence            45667777889999999999  888888888888877665443


No 394
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.83  E-value=1.5e-20  Score=141.02  Aligned_cols=152  Identities=23%  Similarity=0.335  Sum_probs=101.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceee-C-CCCceEEeeeecccccCCCCCCcccccccccccccCcccccc--
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILL-D-NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS--   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~-~-~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--   77 (213)
                      +++.|+++||.|||+++   +||||||.+|||+ + ..-.+||||||..+..+....     ....+..|.+||.+..  
T Consensus       125 ~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~-----~~~~~~~y~~pe~~~~~~  196 (378)
T KOG1345|consen  125 KVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVK-----YLEYVNNYHAPELCDTVV  196 (378)
T ss_pred             HHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccCceeh-----hhhhhcccCCcHHHhhcc
Confidence            57899999999999999   9999999999999 2 335799999999875322111     1223456889986542  


Q ss_pred             -C--CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHh
Q 028134           78 -G--KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAM  154 (213)
Q Consensus        78 -~--~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  154 (213)
                       +  ...+..|+|.||++++.+++|..||.-....+. .-.+|.+        ......+.+. ..-....+.++++.++
T Consensus       197 ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~-~Y~~~~~--------w~~rk~~~~P-~~F~~fs~~a~r~Fkk  266 (378)
T KOG1345|consen  197 NEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDK-PYWEWEQ--------WLKRKNPALP-KKFNPFSEKALRLFKK  266 (378)
T ss_pred             ccceEecccccchheeeeeeeeecCCCcchhhhccCc-hHHHHHH--------HhcccCccCc-hhhcccCHHHHHHHHH
Confidence             2  235789999999999999999999973332222 1111111        1111111111 1122445667888889


Q ss_pred             hcCcCCCCCCCHHHHHH
Q 028134          155 CLNEEANFRPLINDIVV  171 (213)
Q Consensus       155 cl~~~p~~Rps~~ev~~  171 (213)
                      -+..++++|=...++.+
T Consensus       267 ~lt~~~~drcki~~~kk  283 (378)
T KOG1345|consen  267 SLTPRFKDRCKIWTAKK  283 (378)
T ss_pred             hcCCcccccchhHHHHH
Confidence            99999999944444444


No 395
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.82  E-value=6.8e-20  Score=152.86  Aligned_cols=161  Identities=19%  Similarity=0.157  Sum_probs=103.9

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCC--
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK--   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~--   79 (213)
                      .++.|++.+|.|||+.+   ++|+||||+||+++.++.++|+|||++........ ........++.|++||.+....  
T Consensus       313 ~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~aPE~l~~~~~~  388 (507)
T PLN03224        313 GVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSPPEELVMPQSC  388 (507)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeChhhhcCCCCC
Confidence            46889999999999998   99999999999999999999999999864322111 1111123467899999875322  


Q ss_pred             --------------------CCCccceeeHHHHHHHHHhCCC-CccccCCCCccchhhchhhhhhhhhhhhhhcccccCC
Q 028134           80 --------------------LTLKSDIYSFGVVLLELITGRK-AMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG  138 (213)
Q Consensus        80 --------------------~~~~~Di~slG~~~~~l~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (213)
                                          .....|+||+||++++|++|.. |+......... ...    +..+...+..........
T Consensus       389 ~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~-~~~----~~~~~~~~r~~~~~~~~~  463 (507)
T PLN03224        389 PRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTE-LRQ----YDNDLNRWRMYKGQKYDF  463 (507)
T ss_pred             CccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhH-Hhh----ccchHHHHHhhcccCCCc
Confidence                                1234699999999999999875 65422111100 000    000001111111111111


Q ss_pred             CCCHHHHHHHHHHHHhhcCcCC---CCCCCHHHHHH
Q 028134          139 RYPRRCLNYAVAVTAMCLNEEA---NFRPLINDIVV  171 (213)
Q Consensus       139 ~~~~~~~~~~~~li~~cl~~~p---~~Rps~~ev~~  171 (213)
                      ...........+++.+||..+|   .+|+|++|+++
T Consensus       464 ~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~  499 (507)
T PLN03224        464 SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS  499 (507)
T ss_pred             ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence            1223456778999999999766   68999999984


No 396
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.82  E-value=2.1e-21  Score=157.09  Aligned_cols=147  Identities=23%  Similarity=0.285  Sum_probs=111.7

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCC---CceEEeeeecccccCCCCCCcccccccccccccCccccccCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDND---FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK   79 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~   79 (213)
                      ++.||+.||+|||-++   |+|+||||+|||+...   -.+||||||+++.++..   .......||+.|+|||++++..
T Consensus       669 lvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk---sFRrsVVGTPAYLaPEVLrnkG  742 (888)
T KOG4236|consen  669 LVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK---SFRRSVVGTPAYLAPEVLRNKG  742 (888)
T ss_pred             HHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchh---hhhhhhcCCccccCHHHHhhcc
Confidence            4689999999999998   9999999999999554   46899999999976443   2344568999999999999999


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      |.+..|+||.|+|+|.-++|-.||....+...+ +......           .-+..    =.+......++|...|+..
T Consensus       743 yNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQ-IQNAaFM-----------yPp~P----W~eis~~AidlIn~LLqVk  806 (888)
T KOG4236|consen  743 YNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQ-IQNAAFM-----------YPPNP----WSEISPEAIDLINNLLQVK  806 (888)
T ss_pred             ccccccceeeeEEEEEEecccccCCCccchhHH-hhccccc-----------cCCCc----hhhcCHHHHHHHHHHHHHH
Confidence            999999999999999999999999744333221 0000000           00111    1245567788888888888


Q ss_pred             CCCCCCHHHHHH
Q 028134          160 ANFRPLINDIVV  171 (213)
Q Consensus       160 p~~Rps~~ev~~  171 (213)
                      -.+|-+.+..+.
T Consensus       807 m~kRysvdk~ls  818 (888)
T KOG4236|consen  807 MRKRYSVDKSLS  818 (888)
T ss_pred             HHHhcchHhhcc
Confidence            889988877653


No 397
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82  E-value=6.5e-20  Score=151.24  Aligned_cols=107  Identities=31%  Similarity=0.396  Sum_probs=86.4

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCC--------CCCCcc---------------
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPV--------GDNTHV---------------   59 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~--------~~~~~~---------------   59 (213)
                      ++.+|..||++.|+-|   ++||||||+||||+.+|.+||.|||++..+-.        .+....               
T Consensus       734 YIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~  810 (1034)
T KOG0608|consen  734 YIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISK  810 (1034)
T ss_pred             HHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccc
Confidence            4567888999999888   99999999999999999999999999864311        000000               


Q ss_pred             -----------------cccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCcc
Q 028134           60 -----------------STRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ  112 (213)
Q Consensus        60 -----------------~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~  112 (213)
                                       .-...||..|++||++....++..+|.|+.|+|+|||+.|+.||-.......+
T Consensus       811 ~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq  880 (1034)
T KOG0608|consen  811 CLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQ  880 (1034)
T ss_pred             cchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcce
Confidence                             01346899999999999999999999999999999999999999755544443


No 398
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.81  E-value=4.2e-20  Score=156.56  Aligned_cols=148  Identities=24%  Similarity=0.379  Sum_probs=118.3

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC----
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG----   78 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~----   78 (213)
                      |++.++.|+.+||...   ++|||||-.||+++.++.+||+|||++...  ..+........||+.|+|||++...    
T Consensus       128 I~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvDFGvSaQl--dsT~grRnT~iGtP~WMAPEViac~e~~d  202 (953)
T KOG0587|consen  128 ILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DSTVGRRNTFIGTPYWMAPEVIACDESPD  202 (953)
T ss_pred             HHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEeeeeeeeee--ecccccccCcCCCcccccceeeecccCCC
Confidence            6789999999999887   999999999999999999999999997653  3344455677899999999998743    


Q ss_pred             -CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhc-ccccCCCCCHHHHHHHHHHHHhhc
Q 028134           79 -KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV-DPLLHGRYPRRCLNYAVAVTAMCL  156 (213)
Q Consensus        79 -~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl  156 (213)
                       .|+..+|+||||++..||..|.+|+..-...                ..+..+. +|......+....++|.++|..||
T Consensus       203 ~tyd~R~D~WsLGITaIEladG~PPl~DmHPm----------------raLF~IpRNPPPkLkrp~kWs~~FndFIs~cL  266 (953)
T KOG0587|consen  203 ATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM----------------RALFLIPRNPPPKLKRPKKWSKKFNDFISTCL  266 (953)
T ss_pred             CCcccccchhhccceeehhcCCCCCccCcchh----------------hhhccCCCCCCccccchhhHHHHHHHHHHHHH
Confidence             4678899999999999999999998622221                2222222 222222346778899999999999


Q ss_pred             CcCCCCCCCHHHHHH
Q 028134          157 NEEANFRPLINDIVV  171 (213)
Q Consensus       157 ~~~p~~Rps~~ev~~  171 (213)
                      ..|..+||+..++++
T Consensus       267 ~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  267 VKDYEQRPSTEELLK  281 (953)
T ss_pred             hhccccCcchhhhcc
Confidence            999999999988765


No 399
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.80  E-value=1.3e-19  Score=138.69  Aligned_cols=162  Identities=22%  Similarity=0.304  Sum_probs=114.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC---ceEEeeeecccccCCCCCC-----cccccccccccccCcc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF---NPKLSDFGLAKLGPVGDNT-----HVSTRVMGTYGYCAPE   73 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~---~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~Pe   73 (213)
                      ++..+|+.||.|||.+|   |.|||+||+|||...-.   -+|||||.+..........     .......|...|||||
T Consensus       180 ~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPE  256 (463)
T KOG0607|consen  180 RVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPE  256 (463)
T ss_pred             HHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchh
Confidence            46789999999999999   99999999999995433   3699999886543222211     1122345777999999


Q ss_pred             ccc-----cCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchh--hhhhhhhhhhhhcccccCCCCCH----
Q 028134           74 YAM-----SGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR--PFLKDQKKFVHLVDPLLHGRYPR----  142 (213)
Q Consensus        74 ~~~-----~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----  142 (213)
                      +..     ...|+.+.|.||||+|+|-|+.|++||-+....+=.    |.+  ..-..+..+.+-+...-. .+|+    
T Consensus       257 VVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG----WdrGe~Cr~CQ~~LFesIQEGkY-eFPdkdWa  331 (463)
T KOG0607|consen  257 VVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG----WDRGEVCRVCQNKLFESIQEGKY-EFPDKDWA  331 (463)
T ss_pred             HHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC----ccCCCccHHHHHHHHHHHhccCC-cCChhhhH
Confidence            754     235789999999999999999999999876553211    111  112234444444443322 2343    


Q ss_pred             HHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          143 RCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       143 ~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                      ....+..+++...+..++.+|-++..+++
T Consensus       332 hIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  332 HISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            34567788999999999999999988876


No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.79  E-value=4e-19  Score=132.03  Aligned_cols=117  Identities=38%  Similarity=0.574  Sum_probs=98.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC-CCceEEeeeecccccCCCCCCcccccccccccccCccccccC-C
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN-DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-K   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~   79 (213)
                      .++.++++++.+||+.+   ++|+||++.||+++. ++.++++||+.+........  ..........|.+||..... .
T Consensus        96 ~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~  170 (215)
T cd00180          96 RILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGY  170 (215)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCC
Confidence            57889999999999998   999999999999998 89999999998875422211  12224466789999988776 7


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcC
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEE  159 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  159 (213)
                      .+.+.|+|++|++++++                                                 ..+.+++..|++.+
T Consensus       171 ~~~~~D~~~lg~~~~~l-------------------------------------------------~~~~~~l~~~l~~~  201 (215)
T cd00180         171 YSEKSDIWSLGVILYEL-------------------------------------------------PELKDLIRKMLQKD  201 (215)
T ss_pred             CCchhhhHHHHHHHHHH-------------------------------------------------HHHHHHHHHHhhCC
Confidence            78999999999999998                                                 56889999999999


Q ss_pred             CCCCCCHHHHHHH
Q 028134          160 ANFRPLINDIVVA  172 (213)
Q Consensus       160 p~~Rps~~ev~~~  172 (213)
                      |++||++.+++..
T Consensus       202 p~~R~~~~~l~~~  214 (215)
T cd00180         202 PEKRPSAKEILEH  214 (215)
T ss_pred             cccCcCHHHHhhC
Confidence            9999999998764


No 401
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.77  E-value=8e-19  Score=128.94  Aligned_cols=162  Identities=18%  Similarity=0.280  Sum_probs=109.1

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC-CCceEEeeeecccccCCCCCCcccccccccccccCccccccC-CC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDN-DFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG-KL   80 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~   80 (213)
                      .+++++.||.|+|+.|   |.|||+||.|++++. .-.++|+|+|++.++-.+.....   .....-|--||.+... .+
T Consensus       137 Y~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnV---RVASRyfKGPELLVdy~~Y  210 (338)
T KOG0668|consen  137 YIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV---RVASRYFKGPELLVDYQMY  210 (338)
T ss_pred             HHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcCCCceeee---eeehhhcCCchheeechhc
Confidence            5789999999999999   999999999999986 46789999999987533322221   2233456778988754 57


Q ss_pred             CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchh------------hh-hhhhhhhhhhcccccCCCC-------
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSR------------PF-LKDQKKFVHLVDPLLHGRY-------  140 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~------------~~-~~~~~~~~~~~~~~~~~~~-------  140 (213)
                      +++.|+|||||++..|+..+.||........+ .+....            .+ +.-..+...++....+..+       
T Consensus       211 DYSLD~WS~GcmlA~miFrkepFFhG~dN~DQ-LVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~  289 (338)
T KOG0668|consen  211 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ-LVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSE  289 (338)
T ss_pred             cccHHHHHHHHHHHHHHhccCcccCCCCCHHH-HHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcc
Confidence            89999999999999999999998654433322 111110            00 0000111111111111110       


Q ss_pred             -CHHHHHHHHHHHHhhcCcCCCCCCCHHHHHH
Q 028134          141 -PRRCLNYAVAVTAMCLNEEANFRPLINDIVV  171 (213)
Q Consensus       141 -~~~~~~~~~~li~~cl~~~p~~Rps~~ev~~  171 (213)
                       -.-..++..+++...|..|-++|+|++|.+.
T Consensus       290 n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  290 NQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             ccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence             0123467889999999999999999999876


No 402
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77  E-value=2.9e-19  Score=151.99  Aligned_cols=158  Identities=22%  Similarity=0.230  Sum_probs=117.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC--cccccccccccccCccccccCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT--HVSTRVMGTYGYCAPEYAMSGK   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~   79 (213)
                      .++.||+.|++|||+.|   +.|||+|++|+++..+|.+|++|||.+..+......  .......|...|.|||.+.+..
T Consensus       424 c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~  500 (601)
T KOG0590|consen  424 CFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKE  500 (601)
T ss_pred             HHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccc
Confidence            36789999999999999   999999999999999999999999987654333222  4445567888999999999888


Q ss_pred             CC-CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCc
Q 028134           80 LT-LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNE  158 (213)
Q Consensus        80 ~~-~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  158 (213)
                      |. +..||||.|+++..|.+|+.||........+.....       ......+  ..-...+....+.....+|.+||+.
T Consensus       501 ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~lp~~~~~~~~~~l~~  571 (601)
T KOG0590|consen  501 YDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNN-------YSDQRNI--FEGPNRLLSLLPRETRIIIYRMLQL  571 (601)
T ss_pred             cCcchhhhhhccceEEEEecCCCccccccccccchhhhc-------ccccccc--ccChHHHHHhchhhHHHHHHHHccC
Confidence            86 669999999999999999999976554443210000       0000000  0000011234455678899999999


Q ss_pred             CCCCCCCHHHHHH
Q 028134          159 EANFRPLINDIVV  171 (213)
Q Consensus       159 ~p~~Rps~~ev~~  171 (213)
                      +|.+|-|+++|++
T Consensus       572 ~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  572 DPTKRITIEQILN  584 (601)
T ss_pred             ChhheecHHHHhh
Confidence            9999999999986


No 403
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.73  E-value=3.5e-18  Score=132.17  Aligned_cols=132  Identities=21%  Similarity=0.245  Sum_probs=88.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccC---
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG---   78 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~---   78 (213)
                      .+..|+++.+++||+.|   ++|+||+++|++++.+|.++|+||+.....+..    ... ...+..|.|||.....   
T Consensus       149 ~lT~Q~I~lvA~Lh~~G---lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~----~~~-~~~~~~~~PPe~~~~~~~~  220 (288)
T PF14531_consen  149 SLTVQMIRLVANLHSYG---LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTR----YRC-SEFPVAFTPPELESCAGQF  220 (288)
T ss_dssp             HHHHHHHHHHHHHHHTT---EEEST-SGGGEEE-TTS-EEE--GGGEEETTEE----EEG-GGS-TTTS-HHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhhcc---eEecccceeeEEEcCCCCEEEcChHHHeecCce----eec-cCCCcccCChhhhhhhccc
Confidence            35689999999999999   999999999999999999999999876542111    111 2334678899866432   


Q ss_pred             -----CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHH
Q 028134           79 -----KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTA  153 (213)
Q Consensus        79 -----~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  153 (213)
                           .++.+.|.|++|+++|.|+++..||+..........                     .-..+. ..++.+..+|.
T Consensus       221 ~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~---------------------~f~~C~-~~Pe~v~~LI~  278 (288)
T PF14531_consen  221 GQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW---------------------DFSRCR-DMPEPVQFLIR  278 (288)
T ss_dssp             HHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG---------------------GGTTSS----HHHHHHHH
T ss_pred             CcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc---------------------cchhcC-CcCHHHHHHHH
Confidence                 467889999999999999999999974432211100                     111233 66778999999


Q ss_pred             hhcCcCCCCC
Q 028134          154 MCLNEEANFR  163 (213)
Q Consensus       154 ~cl~~~p~~R  163 (213)
                      .+|+.||.+|
T Consensus       279 ~lL~~~~~~R  288 (288)
T PF14531_consen  279 GLLQRNPEDR  288 (288)
T ss_dssp             HHT-SSGGGS
T ss_pred             HHccCCcccC
Confidence            9999999987


No 404
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.72  E-value=1.7e-17  Score=130.91  Aligned_cols=167  Identities=22%  Similarity=0.269  Sum_probs=109.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC-CCceEEeeeecccccCCC-------C------------------
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN-DFNPKLSDFGLAKLGPVG-------D------------------   55 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~-~~~~~l~d~~~~~~~~~~-------~------------------   55 (213)
                      .+++.++.||+++|++|   ||||||||.|++++. -+.-.|.|||++......       .                  
T Consensus       136 ~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~  212 (418)
T KOG1167|consen  136 WYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQS  212 (418)
T ss_pred             HHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccc
Confidence            35789999999999999   999999999999965 356688999998721100       0                  


Q ss_pred             -----------------CCcccccccccccccCcccccc-CCCCCccceeeHHHHHHHHHhCCCCccccCCCCcc-----
Q 028134           56 -----------------NTHVSTRVMGTYGYCAPEYAMS-GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ-----  112 (213)
Q Consensus        56 -----------------~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~-----  112 (213)
                                       .........||++|+|||++.. ...+.+.||||.|+|++.++++..||......-..     
T Consensus       213 ~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~  292 (418)
T KOG1167|consen  213 VATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIA  292 (418)
T ss_pred             cccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHH
Confidence                             0000113468999999998874 45688999999999999999999998533222110     


Q ss_pred             ----------------chhhchhhh-------hhhhhhh-hhhccc-----ccCCCCCHHHHHHHHHHHHhhcCcCCCCC
Q 028134          113 ----------------NLVSWSRPF-------LKDQKKF-VHLVDP-----LLHGRYPRRCLNYAVAVTAMCLNEEANFR  163 (213)
Q Consensus       113 ----------------~~~~~~~~~-------~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~R  163 (213)
                                      .+.-|....       ...-..+ .+.+.+     .......+..+..+.+++.+|++.||.+|
T Consensus       293 tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kR  372 (418)
T KOG1167|consen  293 TIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKR  372 (418)
T ss_pred             HHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhc
Confidence                            000011000       0000001 011111     01111223345578999999999999999


Q ss_pred             CCHHHHHH
Q 028134          164 PLINDIVV  171 (213)
Q Consensus       164 ps~~ev~~  171 (213)
                      -|+++.++
T Consensus       373 itAEeALk  380 (418)
T KOG1167|consen  373 ITAEDALK  380 (418)
T ss_pred             ccHHHHhc
Confidence            99999886


No 405
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.69  E-value=6.4e-17  Score=132.74  Aligned_cols=166  Identities=25%  Similarity=0.318  Sum_probs=117.5

Q ss_pred             hhHHHHHHHHHHhhcCCCCCe-EecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCC-
Q 028134            2 KIAVGAARGLEYLHCKANPPV-IYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGK-   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~-vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-   79 (213)
                      .++++++.|+.|||...   + +|+.++..|++++.+..+|+.|||+.....................|.+||.+.+.. 
T Consensus        52 s~~rdi~~Gl~ylh~s~---i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~  128 (484)
T KOG1023|consen   52 SFIRDISKGLAYLHNSP---IGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALS  128 (484)
T ss_pred             HHHHHHHHHHHHHhcCc---ceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhccccc
Confidence            46789999999999765   5 999999999999999999999999976542211111122233456899999887641 


Q ss_pred             ------CCCccceeeHHHHHHHHHhCCCCccccCCCCcc-chhhchhhhhhhhhhhhhhcccccCCCCC--HHHHHHHHH
Q 028134           80 ------LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQ-NLVSWSRPFLKDQKKFVHLVDPLLHGRYP--RRCLNYAVA  150 (213)
Q Consensus        80 ------~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  150 (213)
                            .+.+.|+||+|++++|+++...||......... .++...          ...-.+.+++...  .+..+.+..
T Consensus       129 ~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~----------~~~~~~~~rP~i~~~~e~~~~l~~  198 (484)
T KOG1023|consen  129 QSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRV----------KKGGSNPFRPSIELLNELPPELLL  198 (484)
T ss_pred             ccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHH----------HhcCCCCcCcchhhhhhcchHHHH
Confidence                  467899999999999999999999753322221 111110          1111111222221  144457899


Q ss_pred             HHHhhcCcCCCCCCCHHHHHHHHHHHhhcc
Q 028134          151 VTAMCLNEEANFRPLINDIVVALDYLVSQR  180 (213)
Q Consensus       151 li~~cl~~~p~~Rps~~ev~~~L~~l~~~~  180 (213)
                      ++..||..+|..||+++.|...++.+....
T Consensus       199 l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~  228 (484)
T KOG1023|consen  199 LVARCWEEIPEKRPSIEQIRSKLLTINKGG  228 (484)
T ss_pred             HHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence            999999999999999999999888777654


No 406
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.69  E-value=6.1e-18  Score=138.22  Aligned_cols=94  Identities=28%  Similarity=0.421  Sum_probs=83.5

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCC-C
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKL-T   81 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~   81 (213)
                      |++|++-|+++||+++   |||||||-+|+.++.+|.+||+|||.+-....    .....+.||..|.|||++.+.+| .
T Consensus       675 IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfgsaa~~ks----gpfd~f~gtv~~aapevl~g~~y~g  747 (772)
T KOG1152|consen  675 IFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFGSAAYTKS----GPFDVFVGTVDYAAPEVLGGEKYLG  747 (772)
T ss_pred             HHHHHHhccccccccC---ceecccccccEEEecCCeEEEeeccchhhhcC----CCcceeeeeccccchhhhCCCccCC
Confidence            7899999999999999   99999999999999999999999999865422    33456789999999999998887 4


Q ss_pred             CccceeeHHHHHHHHHhCCCCc
Q 028134           82 LKSDIYSFGVVLLELITGRKAM  103 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~  103 (213)
                      ..-|||++|+++|.++....||
T Consensus       748 k~qdiwalgillytivykenpy  769 (772)
T KOG1152|consen  748 KPQDIWALGILLYTIVYKENPY  769 (772)
T ss_pred             CcchhhhhhheeeEEEeccCCC
Confidence            6789999999999999888887


No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.66  E-value=1e-15  Score=122.28  Aligned_cols=166  Identities=22%  Similarity=0.223  Sum_probs=119.1

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCC-----CceEEeeeeccc--ccCCCCC---Ccc---cccccccc
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND-----FNPKLSDFGLAK--LGPVGDN---THV---STRVMGTY   67 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~-----~~~~l~d~~~~~--~~~~~~~---~~~---~~~~~~~~   67 (213)
                      ++++.|++.+|++||+.|   ++||||||.|+.+...     ..+.+.|||+++  .+.....   ...   .....||.
T Consensus       125 l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~  201 (322)
T KOG1164|consen  125 LRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTL  201 (322)
T ss_pred             HHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCcc
Confidence            468999999999999999   9999999999999764     358999999998  3222211   111   12355999


Q ss_pred             cccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHH
Q 028134           68 GYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNY  147 (213)
Q Consensus        68 ~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (213)
                      .|.++..-.+...+++.|+||++.++.++..|..||..........             ..................+.+
T Consensus       202 ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~  268 (322)
T KOG1164|consen  202 RYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKS-------------KFEKDPRKLLTDRFGDLKPEE  268 (322)
T ss_pred             ccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHH-------------HHHHHhhhhccccccCCChHH
Confidence            9999998888899999999999999999999999995433222110             000000000000012234456


Q ss_pred             HHHHHHhhcCcCCCCCCCHHHHHHHHHHHhhccCC
Q 028134          148 AVAVTAMCLNEEANFRPLINDIVVALDYLVSQRDS  182 (213)
Q Consensus       148 ~~~li~~cl~~~p~~Rps~~ev~~~L~~l~~~~~~  182 (213)
                      +.++...+-..+...+|....+...|+........
T Consensus       269 ~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~  303 (322)
T KOG1164|consen  269 FAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGS  303 (322)
T ss_pred             HHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCC
Confidence            66666677779999999999999999888887643


No 408
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66  E-value=2.7e-17  Score=133.29  Aligned_cols=142  Identities=25%  Similarity=0.396  Sum_probs=100.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCC----CCcccccccccccccCcccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGD----NTHVSTRVMGTYGYCAPEYAMS   77 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~Pe~~~~   77 (213)
                      .++.|++.|+.|   ++   .+|+|+||.||++..+..++|+|||+........    .........++.+|++||.+.+
T Consensus       363 ~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g  436 (516)
T KOG1033|consen  363 DIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRG  436 (516)
T ss_pred             HHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhh
Confidence            578899999999   76   8999999999999999999999999986532222    1123455789999999999999


Q ss_pred             CCCCCccceeeHHHHHHHHHhC-CCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhc
Q 028134           78 GKLTLKSDIYSFGVVLLELITG-RKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCL  156 (213)
Q Consensus        78 ~~~~~~~Di~slG~~~~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  156 (213)
                      ..|+.+.|||+||++++|++.- ...++                   +.+...++-+..+.+..-.+ .+.-..++++++
T Consensus       437 ~~y~~kvdIyaLGlil~EL~~~f~T~~e-------------------r~~t~~d~r~g~ip~~~~~d-~p~e~~ll~~ll  496 (516)
T KOG1033|consen  437 QQYSEKVDIYALGLILAELLIQFSTQFE-------------------RIATLTDIRDGIIPPEFLQD-YPEEYTLLQQLL  496 (516)
T ss_pred             hhhhhhcchhhHHHHHHHHHHHhccHHH-------------------HHHhhhhhhcCCCChHHhhc-CcHHHHHHHHhc
Confidence            9999999999999999999861 11111                   11222222222111111011 122357888999


Q ss_pred             CcCCCCCCCHHHH
Q 028134          157 NEEANFRPLINDI  169 (213)
Q Consensus       157 ~~~p~~Rps~~ev  169 (213)
                      +..|.+||++.++
T Consensus       497 s~~p~~RP~~~~~  509 (516)
T KOG1033|consen  497 SPSPEERPSAIEV  509 (516)
T ss_pred             CCCcccCchHHHH
Confidence            9999999955544


No 409
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.66  E-value=6.1e-17  Score=140.73  Aligned_cols=149  Identities=24%  Similarity=0.210  Sum_probs=104.6

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcc-----cccccccccccCcccccc
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHV-----STRVMGTYGYCAPEYAMS   77 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~Pe~~~~   77 (213)
                      |+.||+.||...|..|   |+|||||.+|||++.=..+.|.||...+..+-..+...     .........|.|||.+..
T Consensus       125 iaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~  201 (1431)
T KOG1240|consen  125 IAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVS  201 (1431)
T ss_pred             HHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhc
Confidence            6799999999999999   99999999999999988899999987654432222211     122334457999998754


Q ss_pred             C----------C-CCCccceeeHHHHHHHHHh-CCCCccccCCCCccchhhchhhh-hhhhhhhhhhcccccCCCCCHHH
Q 028134           78 G----------K-LTLKSDIYSFGVVLLELIT-GRKAMDLSKGQGEQNLVSWSRPF-LKDQKKFVHLVDPLLHGRYPRRC  144 (213)
Q Consensus        78 ~----------~-~~~~~Di~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  144 (213)
                      .          + .+++.||||+||++.|+++ |.++|+...--.      +.... ...+..+..+-|           
T Consensus       202 ~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~a------Yr~~~~~~~e~~Le~Ied-----------  264 (1431)
T KOG1240|consen  202 ALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLA------YRSGNADDPEQLLEKIED-----------  264 (1431)
T ss_pred             cccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHh------HhccCccCHHHHHHhCcC-----------
Confidence            2          1 4688999999999999976 677886332111      11000 000111121111           


Q ss_pred             HHHHHHHHHhhcCcCCCCCCCHHHHHHH
Q 028134          145 LNYAVAVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       145 ~~~~~~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                       ..+++++..|++.||.+|-++++.++.
T Consensus       265 -~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  265 -VSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             -ccHHHHHHHHHccCchhccCHHHHHHh
Confidence             257899999999999999999999886


No 410
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.65  E-value=1.6e-16  Score=119.75  Aligned_cols=151  Identities=21%  Similarity=0.293  Sum_probs=114.4

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEe--eeecccccCCCCCCcccccccccccccCccccccC
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLS--DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSG   78 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~   78 (213)
                      ++++.++++|++|||+.. +-|..-.+.+.+++++.+.+.++.  |--+++..         ......+.|++||.++..
T Consensus       292 v~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsfqe---------~gr~y~pawmspealqrk  361 (448)
T KOG0195|consen  292 VRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE---------VGRAYSPAWMSPEALQRK  361 (448)
T ss_pred             HHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeeeec---------cccccCcccCCHHHHhcC
Confidence            368899999999999885 324556788889999988776653  44333321         112235689999988755


Q ss_pred             CC---CCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhh
Q 028134           79 KL---TLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMC  155 (213)
Q Consensus        79 ~~---~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  155 (213)
                      +.   -.++|+|||++++||+.+...||......+                --..+.-..++..+|......+.++|.-|
T Consensus       362 ped~n~raadmwsfaillwel~trevpfadlspme----------------cgmkialeglrv~ippgis~hm~klm~ic  425 (448)
T KOG0195|consen  362 PEDLNIRAADMWSFAILLWELNTREVPFADLSPME----------------CGMKIALEGLRVHIPPGISRHMNKLMNIC  425 (448)
T ss_pred             chhcchhhhhHHHHHHHHHHhhccccccccCCchh----------------hhhhhhhccccccCCCCccHHHHHHHHHH
Confidence            43   378999999999999999999997433332                12334455667778888889999999999


Q ss_pred             cCcCCCCCCCHHHHHHHHHHHh
Q 028134          156 LNEEANFRPLINDIVVALDYLV  177 (213)
Q Consensus       156 l~~~p~~Rps~~ev~~~L~~l~  177 (213)
                      +..||.+||.++.|+-.|++..
T Consensus       426 mnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  426 MNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             hcCCCCcCCCcceehhhHHHhc
Confidence            9999999999999999998764


No 411
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.64  E-value=7.2e-16  Score=121.65  Aligned_cols=152  Identities=22%  Similarity=0.165  Sum_probs=105.7

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceee--CCC--CceEEeeeecccccCCCCCC----cccccccccccccCccc
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILL--DND--FNPKLSDFGLAKLGPVGDNT----HVSTRVMGTYGYCAPEY   74 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~--~~~--~~~~l~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~Pe~   74 (213)
                      ++.|+++|+.|||++|   +.|||+|++||++  +.+  -.+.++|||.+.-....+..    ...-...|.-..++||+
T Consensus       346 ~laQlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi  422 (598)
T KOG4158|consen  346 ILAQLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEI  422 (598)
T ss_pred             HHHHHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhh
Confidence            6789999999999999   9999999999999  333  35689999976532221111    11112345667899998


Q ss_pred             cccCCCC------CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHH
Q 028134           75 AMSGKLT------LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYA  148 (213)
Q Consensus        75 ~~~~~~~------~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (213)
                      ....+..      .++|.|+.|.+.||++....||-...+.--           . ...    .....-+.++..+++.+
T Consensus       423 ~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L-----------~-~r~----Yqe~qLPalp~~vpp~~  486 (598)
T KOG4158|consen  423 ATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL-----------D-TRT----YQESQLPALPSRVPPVA  486 (598)
T ss_pred             hhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee-----------c-hhh----hhhhhCCCCcccCChHH
Confidence            7643321      579999999999999999999853211110           0 000    11112234577888999


Q ss_pred             HHHHHhhcCcCCCCCCCHHHHHHHH
Q 028134          149 VAVTAMCLNEEANFRPLINDIVVAL  173 (213)
Q Consensus       149 ~~li~~cl~~~p~~Rps~~ev~~~L  173 (213)
                      .+++...|+.||.+|++..-....|
T Consensus       487 rqlV~~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  487 RQLVFDLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             HHHHHHHhcCCccccCCccHHHhHH
Confidence            9999999999999999977555544


No 412
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.64  E-value=4.2e-16  Score=117.44  Aligned_cols=99  Identities=37%  Similarity=0.435  Sum_probs=82.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCcccc-ccCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA-MSGKL   80 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~-~~~~~   80 (213)
                      .++.+++.++.+||+++   ++|+|+++.|++++.++.++++|||.+........ .......+...|++||.. ....+
T Consensus       102 ~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~  177 (225)
T smart00221      102 FYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-ALLKTVKGTPFYLAPEVLLGGKGY  177 (225)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-ccccceeccCCcCCHhHhcCCCCC
Confidence            47889999999999998   99999999999999999999999998876433210 012234566789999987 55667


Q ss_pred             CCccceeeHHHHHHHHHhCCCCcc
Q 028134           81 TLKSDIYSFGVVLLELITGRKAMD  104 (213)
Q Consensus        81 ~~~~Di~slG~~~~~l~~g~~p~~  104 (213)
                      +.+.|+|++|++++++++|+.||.
T Consensus       178 ~~~~Dv~~lG~~~~~l~~g~~pf~  201 (225)
T smart00221      178 GEAVDIWSLGVILYELLWGPEPFS  201 (225)
T ss_pred             CchhhHHHHHHHHHHHHHCCCCcc
Confidence            789999999999999999999995


No 413
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.62  E-value=2.4e-16  Score=136.63  Aligned_cols=139  Identities=26%  Similarity=0.339  Sum_probs=105.2

Q ss_pred             HHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC-------------cccccccccccccCc
Q 028134            6 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT-------------HVSTRVMGTYGYCAP   72 (213)
Q Consensus         6 ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~P   72 (213)
                      +++.+++|||+.+   |+|+|+|++|.+|..-|.+|+.|||+.+........             ....+..+|+.|.+|
T Consensus       151 dmvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaP  227 (1205)
T KOG0606|consen  151 DMVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAP  227 (1205)
T ss_pred             hhhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccCh
Confidence            4578999999998   999999999999999999999999998764322111             011234789999999


Q ss_pred             cccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhc-ccccCCCCCHHHHHHHHHH
Q 028134           73 EYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLV-DPLLHGRYPRRCLNYAVAV  151 (213)
Q Consensus        73 e~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l  151 (213)
                      |++.-..|....|+|++|+|+||++-|..||.+...+..                +..++ |...+.+-.....++..++
T Consensus       228 eVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel----------------fg~visd~i~wpE~dea~p~Ea~dl  291 (1205)
T KOG0606|consen  228 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL----------------FGQVISDDIEWPEEDEALPPEAQDL  291 (1205)
T ss_pred             hhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH----------------HhhhhhhhccccccCcCCCHHHHHH
Confidence            999999999999999999999999999999974422211                11111 1112222244556788899


Q ss_pred             HHhhcCcCCCCC
Q 028134          152 TAMCLNEEANFR  163 (213)
Q Consensus       152 i~~cl~~~p~~R  163 (213)
                      +.+.|+.+|..|
T Consensus       292 i~~LL~qnp~~R  303 (1205)
T KOG0606|consen  292 IEQLLRQNPLCR  303 (1205)
T ss_pred             HHHHHHhChHhh
Confidence            999999999999


No 414
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.61  E-value=7.8e-16  Score=127.79  Aligned_cols=148  Identities=23%  Similarity=0.337  Sum_probs=108.4

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc---cCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM---SGK   79 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~~   79 (213)
                      +++..++|++|||+.+   -+|||||-.||+++..|.+|++|||.+-.+..  .......++||+-|++||+..   .+.
T Consensus       117 vcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqita--ti~KrksfiGtpywmapEvaaverkgg  191 (829)
T KOG0576|consen  117 VCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITA--TIAKRKSFIGTPYWMAPEVAAVERKGG  191 (829)
T ss_pred             HHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhh--hhhhhhcccCCccccchhHHHHHhccc
Confidence            4677889999999998   79999999999999999999999998754322  122345678999999999875   457


Q ss_pred             CCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCC---CCCHHHHHHHHHHHHhhc
Q 028134           80 LTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHG---RYPRRCLNYAVAVTAMCL  156 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl  156 (213)
                      |...+|+|++|+...|+-.-++|.......                ..+.-+-.....+   +-.....+.|-++++.|+
T Consensus       192 ynqlcdiwa~gitAiel~eLqpplfdlhpm----------------r~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~al  255 (829)
T KOG0576|consen  192 YNQLCDIWALGITAIELGELQPPLFDLHPM----------------RALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGAL  255 (829)
T ss_pred             ccccccccccccchhhhhhcCCcccccchH----------------HHHHHhhccCCCCCcccCCccchHHHHHHHHHHh
Confidence            889999999999999987766664311111                1111111111111   112345667889999999


Q ss_pred             CcCCCCCCCHHHHHH
Q 028134          157 NEEANFRPLINDIVV  171 (213)
Q Consensus       157 ~~~p~~Rps~~ev~~  171 (213)
                      ..+|.+||+++.+++
T Consensus       256 tknpKkRptaeklL~  270 (829)
T KOG0576|consen  256 TKNPKKRPTAEKLLQ  270 (829)
T ss_pred             cCCCccCCChhhhee
Confidence            999999999987764


No 415
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.55  E-value=4.2e-14  Score=109.31  Aligned_cols=167  Identities=17%  Similarity=0.175  Sum_probs=123.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC-----CCceEEeeeecccccCCCCCC-----cccccccccccccC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN-----DFNPKLSDFGLAKLGPVGDNT-----HVSTRVMGTYGYCA   71 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~-----~~~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   71 (213)
                      -++.|++.-++++|++.   +|+|||||+|+||..     ...+.++|||++..+-+..+.     .......||..||+
T Consensus       128 miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMS  204 (449)
T KOG1165|consen  128 MIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMS  204 (449)
T ss_pred             HHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeE
Confidence            37899999999999998   999999999999943     345789999999876443322     22345678999999


Q ss_pred             ccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCC---CCHHHHHHH
Q 028134           72 PEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGR---YPRRCLNYA  148 (213)
Q Consensus        72 Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  148 (213)
                      -..-.+...+++.|+-+||-++++++-|..||.+..........+             .+=+......   +-...+.+|
T Consensus       205 INTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYe-------------KIGe~Kr~T~i~~Lc~g~P~ef  271 (449)
T KOG1165|consen  205 INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYE-------------KIGETKRSTPIEVLCEGFPEEF  271 (449)
T ss_pred             eeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHH-------------HhccccccCCHHHHHhcCHHHH
Confidence            988888899999999999999999999999998766554322111             1111111111   112344566


Q ss_pred             HHHHHhhcCcCCCCCCCHHHHHHHHHHHhhccCCCc
Q 028134          149 VAVTAMCLNEEANFRPLINDIVVALDYLVSQRDSHP  184 (213)
Q Consensus       149 ~~li~~cl~~~p~~Rps~~ev~~~L~~l~~~~~~~~  184 (213)
                      ..-+.-.-..+-.+-|+.+-+...+..+.+..+...
T Consensus       272 a~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~  307 (449)
T KOG1165|consen  272 ATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETD  307 (449)
T ss_pred             HHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcc
Confidence            666666666788889999999999999988777644


No 416
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.54  E-value=4.8e-14  Score=111.13  Aligned_cols=158  Identities=34%  Similarity=0.426  Sum_probs=112.2

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC-ceEEeeeecccccCCCCCCc----ccccccccccccCccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF-NPKLSDFGLAKLGPVGDNTH----VSTRVMGTYGYCAPEYAM   76 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~-~~~l~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~Pe~~~   76 (213)
                      .++.|++.++.|+|+.+   ++|||+||+|++++..+ .++++|||.+..........    ......++..|.+||.+.
T Consensus       105 ~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~  181 (384)
T COG0515         105 FILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLL  181 (384)
T ss_pred             HHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhc
Confidence            46889999999999998   99999999999999888 79999999987433322211    234567899999999988


Q ss_pred             c---CCCCCccceeeHHHHHHHHHhCCCCccccCCC-CccchhhchhhhhhhhhhhhhhcccccCCCCC----HHHHHHH
Q 028134           77 S---GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQ-GEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYP----RRCLNYA  148 (213)
Q Consensus        77 ~---~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~  148 (213)
                      +   .......|+|++|+++++++.|..||...... ......          ..+.....+.......    ......+
T Consensus       182 ~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (384)
T COG0515         182 GLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTL----------KIILELPTPSLASPLSPSNPELISKAA  251 (384)
T ss_pred             CCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHH----------HHHHhcCCcccccccCccccchhhHHH
Confidence            7   57889999999999999999999996533321 000000          0000000000011111    1223578


Q ss_pred             HHHHHhhcCcCCCCCCCHHHHHHH
Q 028134          149 VAVTAMCLNEEANFRPLINDIVVA  172 (213)
Q Consensus       149 ~~li~~cl~~~p~~Rps~~ev~~~  172 (213)
                      .+++..|+..+|..|.+..+....
T Consensus       252 ~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         252 SDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHHhcCchhcCCHHHHhhc
Confidence            899999999999999999987764


No 417
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.50  E-value=1.1e-14  Score=120.38  Aligned_cols=130  Identities=29%  Similarity=0.345  Sum_probs=104.4

Q ss_pred             HHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCCc
Q 028134            4 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK   83 (213)
Q Consensus         4 ~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~   83 (213)
                      ...++-+++++|+.+   ++|+|+|++||+++.+|.+++.|||+++..-...      ...|++.|++||+..  ....+
T Consensus       103 ~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~------~~cgt~eymApEI~~--gh~~a  171 (612)
T KOG0603|consen  103 LAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK------IACGTYEYRAPEIIN--GHLSA  171 (612)
T ss_pred             HHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhh------hcccchhhhhhHhhh--ccCCc
Confidence            457788999999999   9999999999999999999999999987532211      127899999999877  55788


Q ss_pred             cceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCCCC
Q 028134           84 SDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEANFR  163 (213)
Q Consensus        84 ~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  163 (213)
                      .|.|++|++.+++++|..||..                    .....++..  ...+|......+.+++..++..+|.+|
T Consensus       172 ~D~ws~gvl~felltg~~pf~~--------------------~~~~~Il~~--~~~~p~~l~~~a~~~~~~l~~r~p~nr  229 (612)
T KOG0603|consen  172 ADWWSFGVLAFELLTGTLPFGG--------------------DTMKRILKA--ELEMPRELSAEARSLFRQLFKRNPENR  229 (612)
T ss_pred             ccchhhhhhHHHHhhCCCCCch--------------------HHHHHHhhh--ccCCchhhhHHHHHHHHHHHhhCHHHH
Confidence            9999999999999999999963                    122222221  223467888889999999999999999


Q ss_pred             CCH
Q 028134          164 PLI  166 (213)
Q Consensus       164 ps~  166 (213)
                      --.
T Consensus       230 Lg~  232 (612)
T KOG0603|consen  230 LGA  232 (612)
T ss_pred             hcc
Confidence            655


No 418
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.45  E-value=1.2e-13  Score=102.69  Aligned_cols=161  Identities=19%  Similarity=0.164  Sum_probs=113.2

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC---CCceEEeeeecccccCCCCCCc-----ccccccccccccCccc
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDN---DFNPKLSDFGLAKLGPVGDNTH-----VSTRVMGTYGYCAPEY   74 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~---~~~~~l~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Pe~   74 (213)
                      ++-|++.-++|+|.++   ++||||||+|++..-   ...+.++|||++..+.+..+..     ......||..|.+-..
T Consensus       116 LaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinA  192 (341)
T KOG1163|consen  116 LADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINA  192 (341)
T ss_pred             HHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhh
Confidence            5789999999999999   999999999999854   3567899999998765443321     1234567888887766


Q ss_pred             cccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCC---CHHHHHHHHHH
Q 028134           75 AMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRY---PRRCLNYAVAV  151 (213)
Q Consensus        75 ~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l  151 (213)
                      ..+...+++.|+-|+|.++.++--|..||.+-......+..+             .+.........   =...+.++.-.
T Consensus       193 h~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyE-------------kI~EkK~s~~ie~LC~G~P~EF~my  259 (341)
T KOG1163|consen  193 HLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYE-------------KISEKKMSTPIEVLCKGFPAEFAMY  259 (341)
T ss_pred             hhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHH-------------HHHHhhcCCCHHHHhCCCcHHHHHH
Confidence            666677899999999999999999999998665544432222             11111111111   11334566666


Q ss_pred             HHhhcCcCCCCCCCHHHHHHHHHHHhhc
Q 028134          152 TAMCLNEEANFRPLINDIVVALDYLVSQ  179 (213)
Q Consensus       152 i~~cl~~~p~~Rps~~ev~~~L~~l~~~  179 (213)
                      +.-|-...-++-|+...+.+.+.-|...
T Consensus       260 l~Y~R~L~F~E~Pdy~ylrqlFriLfr~  287 (341)
T KOG1163|consen  260 LNYCRGLGFEEKPDYMYLRQLFRILFRT  287 (341)
T ss_pred             HHHHhhcCCCCCCcHHHHHHHHHHHHhh
Confidence            6777777777778787777777666553


No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.26  E-value=4.8e-12  Score=93.80  Aligned_cols=103  Identities=23%  Similarity=0.168  Sum_probs=74.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCC-CCCceeeCCCCceEEeeeecccccCCCCCC----cc-------cccccccccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDL-KSANILLDNDFNPKLSDFGLAKLGPVGDNT----HV-------STRVMGTYGY   69 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl-~~~nil~~~~~~~~l~d~~~~~~~~~~~~~----~~-------~~~~~~~~~~   69 (213)
                      .++.|++.+|.++|.+|   ++|+|| ||+||+++.++.++|+|||++.........    ..       ......+..|
T Consensus        95 ~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~  171 (218)
T PRK12274         95 AYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAA  171 (218)
T ss_pred             HHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            36789999999999999   999999 799999999999999999999854322210    00       1122346667


Q ss_pred             cCccccccC-CCC-CccceeeHHHHHHHHHhCCCCccccC
Q 028134           70 CAPEYAMSG-KLT-LKSDIYSFGVVLLELITGRKAMDLSK  107 (213)
Q Consensus        70 ~~Pe~~~~~-~~~-~~~Di~slG~~~~~l~~g~~p~~~~~  107 (213)
                      +.|+...-. ..+ .+.+.++.|+.+|.++|+..+.....
T Consensus       172 l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        172 LTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             CCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            777643321 223 55677899999999999998875443


No 420
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.25  E-value=1e-11  Score=100.03  Aligned_cols=72  Identities=24%  Similarity=0.188  Sum_probs=56.8

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCC-CCCceeeCCCCceEEeeeecccccCCCCCCcc------cccccccccccCccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDL-KSANILLDNDFNPKLSDFGLAKLGPVGDNTHV------STRVMGTYGYCAPEY   74 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl-~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~------~~~~~~~~~~~~Pe~   74 (213)
                      +++.|++++|.|||+++   ++|||| ||+||+++.++.++|+|||++..+........      .....++..|.+||.
T Consensus       115 ~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~  191 (365)
T PRK09188        115 AWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDA  191 (365)
T ss_pred             HHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCccc
Confidence            47889999999999998   999999 99999999899999999999986543322111      123456667889987


Q ss_pred             cc
Q 028134           75 AM   76 (213)
Q Consensus        75 ~~   76 (213)
                      +.
T Consensus       192 ~~  193 (365)
T PRK09188        192 LT  193 (365)
T ss_pred             CC
Confidence            65


No 421
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25  E-value=3e-11  Score=106.41  Aligned_cols=99  Identities=21%  Similarity=0.183  Sum_probs=79.1

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeC-------CCCceEEeeeecccccCCCCCCcccccccccccccCcc
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLD-------NDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE   73 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~-------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe   73 (213)
                      |-+..|++..|+.||..+   |||+||||+|+++.       .+..++|+|||.+--...-.........+.+-.+-.+|
T Consensus       797 ~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~E  873 (974)
T KOG1166|consen  797 MFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIE  873 (974)
T ss_pred             hHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHH
Confidence            347899999999999998   99999999999992       34578999999875221111222233456778888999


Q ss_pred             ccccCCCCCccceeeHHHHHHHHHhCCCC
Q 028134           74 YAMSGKLTLKSDIYSFGVVLLELITGRKA  102 (213)
Q Consensus        74 ~~~~~~~~~~~Di~slG~~~~~l~~g~~p  102 (213)
                      ...|.++++..|.|.++.+++-|+.|.+.
T Consensus       874 M~~grpWtYq~DyfGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  874 MREGRPWTYQIDYFGLAATVHVMLFGKYM  902 (974)
T ss_pred             HhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998743


No 422
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20  E-value=4e-12  Score=108.71  Aligned_cols=153  Identities=26%  Similarity=0.312  Sum_probs=111.6

Q ss_pred             hHHHHHHHHHHhh-cCCCCCeEecCCCCCceeeCCCC-ceEEeeeecccccCC-CCCCcccccccc-cccccCccccccC
Q 028134            3 IAVGAARGLEYLH-CKANPPVIYRDLKSANILLDNDF-NPKLSDFGLAKLGPV-GDNTHVSTRVMG-TYGYCAPEYAMSG   78 (213)
Q Consensus         3 i~~ql~~al~~LH-~~~~~~~vH~dl~~~nil~~~~~-~~~l~d~~~~~~~~~-~~~~~~~~~~~~-~~~~~~Pe~~~~~   78 (213)
                      .+.|+..++.|+| ..+   +.|+|+||+|.+++.++ .++++|||++..+.. .+.........+ +..|.+||...+.
T Consensus       128 ~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~  204 (601)
T KOG0590|consen  128 YLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGK  204 (601)
T ss_pred             hhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccch
Confidence            5689999999999 888   99999999999999999 999999999987655 333333444566 8999999988874


Q ss_pred             -CCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcC
Q 028134           79 -KLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLN  157 (213)
Q Consensus        79 -~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  157 (213)
                       ......|+||.|+++..+++|..|++......... ..|..     ..       ................+++..++.
T Consensus       205 ~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-~~~~~-----~~-------~~~~~~~~~~~~~~~~~~l~k~l~  271 (601)
T KOG0590|consen  205 AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-SSWKS-----NK-------GRFTQLPWNSISDQAHDLLHKILK  271 (601)
T ss_pred             hhcCCCcccccccccccccccCCCCccccccccccc-eeecc-----cc-------cccccCccccCChhhhhccccccc
Confidence             44678999999999999999999997554443210 00000     00       000011122334456777888888


Q ss_pred             cCCCCCCCHHHHHH
Q 028134          158 EEANFRPLINDIVV  171 (213)
Q Consensus       158 ~~p~~Rps~~ev~~  171 (213)
                      .+|..|.+.+++..
T Consensus       272 ~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  272 ENPSNRLSIEELKL  285 (601)
T ss_pred             CCchhccccccccc
Confidence            99999999988754


No 423
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.15  E-value=3e-11  Score=93.74  Aligned_cols=99  Identities=25%  Similarity=0.351  Sum_probs=72.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccC--CCCCCcccccccccccccCccccccCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGP--VGDNTHVSTRVMGTYGYCAPEYAMSGK   79 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~Pe~~~~~~   79 (213)
                      ||+-||+.||.|||+. .|+++|+++..+.+++..+|-+|+.--.-...-+  ............+.+.|.+||.-....
T Consensus       180 kw~tqIlsal~yLhs~-~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn  258 (458)
T KOG1266|consen  180 KWCTQILSALSYLHSC-DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTN  258 (458)
T ss_pred             HHHHHHHhhhhhhhcc-CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccc
Confidence            6899999999999998 5889999999999999999988875321111000  001111122334567889999766667


Q ss_pred             CCCccceeeHHHHHHHHHhCCC
Q 028134           80 LTLKSDIYSFGVVLLELITGRK  101 (213)
Q Consensus        80 ~~~~~Di~slG~~~~~l~~g~~  101 (213)
                      ...+.|||+||+..++|.-+..
T Consensus       259 ~~~a~dIy~fgmcAlemailEi  280 (458)
T KOG1266|consen  259 TTGASDIYKFGMCALEMAILEI  280 (458)
T ss_pred             cccchhhhhhhHHHHHHHHhee
Confidence            7789999999999999977653


No 424
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.08  E-value=4.1e-11  Score=90.41  Aligned_cols=77  Identities=14%  Similarity=0.224  Sum_probs=57.7

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCC
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTL   82 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~   82 (213)
                      ...+++.++..+|..|   ++|+|++|.|++++.++ ++++|||............              .+.....+..
T Consensus       140 ~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~d--------------~~vler~y~~  201 (232)
T PRK10359        140 VKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAKD--------------RIDLERHYGI  201 (232)
T ss_pred             HHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-EEEEECCCcccccchhhHH--------------HHHHHhHhcc
Confidence            3568999999999999   99999999999999888 9999999875431111000              0223334557


Q ss_pred             ccceeeHHHHHHHHH
Q 028134           83 KSDIYSFGVVLLELI   97 (213)
Q Consensus        83 ~~Di~slG~~~~~l~   97 (213)
                      ++|+|+||+.+..+.
T Consensus       202 ~~di~~lg~~~~~~~  216 (232)
T PRK10359        202 KNEIKDLGYYLLIYK  216 (232)
T ss_pred             cccccceeEeehHHH
Confidence            899999999877654


No 425
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.07  E-value=2.7e-09  Score=85.84  Aligned_cols=175  Identities=19%  Similarity=0.193  Sum_probs=112.8

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccc----
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAM----   76 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~----   76 (213)
                      +++++.|+.+.+-||..|   .+-+|+.++|+++++++.+.|.|-......   ..........+...|.+||...    
T Consensus       120 lrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi~---~ng~~~~cpVg~~eftPPElQ~~~sf  193 (637)
T COG4248         120 LRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQIN---ANGTLHLCPVGVSEFTPPELQTLPSF  193 (637)
T ss_pred             HHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceeec---cCCceEecccCccccCCHHHhccccc
Confidence            467899999999999999   899999999999999999999886544432   1112223345778999999654    


Q ss_pred             -cCCCCCccceeeHHHHHHHHHhC-CCCccccCCCC-ccc--hhhchhhhhhhhhhhhhhcccccCCCCC-HHHHHHHHH
Q 028134           77 -SGKLTLKSDIYSFGVVLLELITG-RKAMDLSKGQG-EQN--LVSWSRPFLKDQKKFVHLVDPLLHGRYP-RRCLNYAVA  150 (213)
Q Consensus        77 -~~~~~~~~Di~slG~~~~~l~~g-~~p~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  150 (213)
                       +..-+...|.|.||+++++++.| ..||.+---.. ...  ..+.....+....+...-..+..+ .+| ....+.+..
T Consensus       194 ~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~-~~P~~~Lpp~vqA  272 (637)
T COG4248         194 VGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPR-SIPLSMLPPDVQA  272 (637)
T ss_pred             cccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCC-CCChhhcCHHHHH
Confidence             22345778999999999999876 88986421111 000  000000001100110101111111 122 234567888


Q ss_pred             HHHhhcCcC--CCCCCCHHHHHHHHHHHhhccCC
Q 028134          151 VTAMCLNEE--ANFRPLINDIVVALDYLVSQRDS  182 (213)
Q Consensus       151 li~~cl~~~--p~~Rps~~ev~~~L~~l~~~~~~  182 (213)
                      +..+|+...  +.-||+++-.+..|..+..+.-.
T Consensus       273 lF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~  306 (637)
T COG4248         273 LFQQAFTESGVATPRPTAKAWVAALDALRQQLKK  306 (637)
T ss_pred             HHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhh
Confidence            888998654  67899999999999888876554


No 426
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.98  E-value=5.2e-10  Score=82.79  Aligned_cols=46  Identities=22%  Similarity=0.176  Sum_probs=42.4

Q ss_pred             hhHHHHHHHHHHhhc-CCCCCeEecCCCCCceeeCCCCceEEeeeeccccc
Q 028134            2 KIAVGAARGLEYLHC-KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG   51 (213)
Q Consensus         2 ~i~~ql~~al~~LH~-~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~   51 (213)
                      +++.|++.++.+||+ .+   ++|+||||.||+++ ++.++|+|||++...
T Consensus       121 ~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-~~~~~liDFG~a~~~  167 (190)
T cd05145         121 ELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-DGKPYIIDVSQAVEL  167 (190)
T ss_pred             HHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-CCCEEEEEcccceec
Confidence            578999999999999 88   99999999999998 789999999998753


No 427
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.97  E-value=4e-10  Score=83.35  Aligned_cols=45  Identities=16%  Similarity=0.128  Sum_probs=40.7

Q ss_pred             hhHHHHHHHHHHh-hcCCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            2 KIAVGAARGLEYL-HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         2 ~i~~ql~~al~~L-H~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      +++.|++.+|.+| |+.+   ++|+||||+||+++ ++.++|+|||++..
T Consensus       121 ~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~~~v~LiDFG~a~~  166 (190)
T cd05147         121 ELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-DGKLYIIDVSQSVE  166 (190)
T ss_pred             HHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-CCcEEEEEcccccc
Confidence            5789999999999 6888   99999999999998 47899999999864


No 428
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.93  E-value=6.1e-10  Score=93.90  Aligned_cols=150  Identities=19%  Similarity=0.272  Sum_probs=102.5

Q ss_pred             HHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCC-------cccccccccccccCccccccC
Q 028134            6 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNT-------HVSTRVMGTYGYCAPEYAMSG   78 (213)
Q Consensus         6 ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~Pe~~~~~   78 (213)
                      ++++|+.|+|...+  +||++|.|++|.++.++..|++.|+++-........       ...........|.+||++.+.
T Consensus       107 ~v~dgl~flh~sAk--~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~  184 (700)
T KOG2137|consen  107 NVADGLAFLHRSAK--VVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT  184 (700)
T ss_pred             cccchhhhhccCcc--eeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence            45678999997654  999999999999999999999999876532221110       111112234579999999887


Q ss_pred             CCCCccceeeHHHHHHHHH-hCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcC
Q 028134           79 KLTLKSDIYSFGVVLLELI-TGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLN  157 (213)
Q Consensus        79 ~~~~~~Di~slG~~~~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  157 (213)
                      ....++|+||+|+++|-+. .|+..+........              +......+......+....+.++.+-+..++.
T Consensus       185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~--------------~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~  250 (700)
T KOG2137|consen  185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS--------------YSFSRNLLNAGAFGYSNNLPSELRESLKKLLN  250 (700)
T ss_pred             cccccccceeeeeEEEEEecCCcchhhccCCcch--------------hhhhhcccccccccccccCcHHHHHHHHHHhc
Confidence            7789999999999999988 56555543222211              11111111111222345667788888999999


Q ss_pred             cCCCCCCCHHHHHH
Q 028134          158 EEANFRPLINDIVV  171 (213)
Q Consensus       158 ~~p~~Rps~~ev~~  171 (213)
                      .++..||++.++..
T Consensus       251 ~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  251 GDSAVRPTLDLLLS  264 (700)
T ss_pred             CCcccCcchhhhhc
Confidence            99999997776653


No 429
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.72  E-value=1.3e-08  Score=78.04  Aligned_cols=45  Identities=31%  Similarity=0.268  Sum_probs=41.5

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      .+.|++.+|.+||..|   |+|+||||.||+++.++.++|+|||.+..
T Consensus       147 ~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        147 QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            4678999999999999   99999999999999888999999998864


No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.68  E-value=2.1e-08  Score=74.63  Aligned_cols=46  Identities=20%  Similarity=0.149  Sum_probs=42.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      +++.+++.++.++|..+   ++|+||+|.||+++.++.++|+|||.+..
T Consensus       129 ~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nill~~~~~~~liDfg~~~~  174 (198)
T cd05144         129 EVLDEILEEIVKAYKHG---IIHGDLSEFNILVDDDEKIYIIDWPQMVS  174 (198)
T ss_pred             HHHHHHHHHHHHHHHCC---CCcCCCCcccEEEcCCCcEEEEECCcccc
Confidence            47889999999999998   99999999999999999999999999854


No 431
>smart00090 RIO RIO-like kinase.
Probab=98.64  E-value=3.8e-08  Score=75.33  Aligned_cols=46  Identities=17%  Similarity=0.146  Sum_probs=41.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      +++.|++.++.+||.++.  ++|+||||+||+++ ++.++++|||.+..
T Consensus       152 ~i~~qi~~~l~~LH~~g~--iiH~Dikp~NIli~-~~~i~LiDFg~a~~  197 (237)
T smart00090      152 ELYDDILEEMRKLYKEGE--LVHGDLSEYNILVH-DGKVVIIDVSQSVE  197 (237)
T ss_pred             HHHHHHHHHHHHHHhcCC--EEeCCCChhhEEEE-CCCEEEEEChhhhc
Confidence            578999999999997763  99999999999999 88899999998764


No 432
>PRK10345 hypothetical protein; Provisional
Probab=98.57  E-value=6.4e-08  Score=72.55  Aligned_cols=42  Identities=24%  Similarity=0.233  Sum_probs=35.2

Q ss_pred             hHHHHHHHH-HHhhcCCCCCeEecCCCCCceeeCC----CCceEEeeeec
Q 028134            3 IAVGAARGL-EYLHCKANPPVIYRDLKSANILLDN----DFNPKLSDFGL   47 (213)
Q Consensus         3 i~~ql~~al-~~LH~~~~~~~vH~dl~~~nil~~~----~~~~~l~d~~~   47 (213)
                      ++.|++.++ +|||+++   |+|+||||+||+++.    ++.++|+|++.
T Consensus       109 ~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~G  155 (210)
T PRK10345        109 QLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNIG  155 (210)
T ss_pred             HHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence            467888888 9999998   999999999999963    34799999543


No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.55  E-value=7e-08  Score=70.95  Aligned_cols=45  Identities=22%  Similarity=0.124  Sum_probs=41.5

Q ss_pred             hhHHHHHHHHHHhhc-CCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            2 KIAVGAARGLEYLHC-KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         2 ~i~~ql~~al~~LH~-~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      +++.+++.++.++|. .+   ++|+||+|+||+++ ++.++++|||.+..
T Consensus       118 ~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-~~~~~liDfg~a~~  163 (187)
T cd05119         118 ELYDQILELMRKLYREAG---LVHGDLSEYNILVD-DGKVYIIDVPQAVE  163 (187)
T ss_pred             HHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-CCcEEEEECccccc
Confidence            478899999999999 87   99999999999999 88999999999864


No 434
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.55  E-value=7.4e-08  Score=80.15  Aligned_cols=147  Identities=30%  Similarity=0.375  Sum_probs=98.1

Q ss_pred             HHHHHH----HHHHhhcCCCCCeEecCCCCCceeeCCC-CceEEeeeecccccCCCCCCcc---cccccccccccCcccc
Q 028134            4 AVGAAR----GLEYLHCKANPPVIYRDLKSANILLDND-FNPKLSDFGLAKLGPVGDNTHV---STRVMGTYGYCAPEYA   75 (213)
Q Consensus         4 ~~ql~~----al~~LH~~~~~~~vH~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~Pe~~   75 (213)
                      ..+...    |+.++|+.+   ++|.|+++.|++...+ ..+++.||++...+........   ..+..+...|++||..
T Consensus       224 ~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~  300 (524)
T KOG0601|consen  224 LRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELL  300 (524)
T ss_pred             HhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhh
Confidence            344555    999999988   9999999999999988 7889999999876654432211   2233567789999966


Q ss_pred             ccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhh
Q 028134           76 MSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMC  155 (213)
Q Consensus        76 ~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  155 (213)
                      . .-+....|+|++|.++.+...+....-......      |..     ..+..      ...++-......+...+..|
T Consensus       301 ~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~------W~~-----~r~~~------ip~e~~~~~s~~l~~~~~~~  362 (524)
T KOG0601|consen  301 N-GLATFASDIFSLGEVILEAILGSHLPSVGKNSS------WSQ-----LRQGY------IPLEFCEGGSSSLRSVTSQM  362 (524)
T ss_pred             c-cccchHhhhcchhhhhHhhHhhcccccCCCCCC------ccc-----ccccc------CchhhhcCcchhhhhHHHHh
Confidence            5 456788999999999999888765432111000      000     00000      01111112233455588889


Q ss_pred             cCcCCCCCCCHHHHHH
Q 028134          156 LNEEANFRPLINDIVV  171 (213)
Q Consensus       156 l~~~p~~Rps~~ev~~  171 (213)
                      ++.+|-.|++.+.+..
T Consensus       363 ~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  363 LDEDPRLRLTAQILTA  378 (524)
T ss_pred             cCcchhhhhHHHHHhc
Confidence            9999999999887754


No 435
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.52  E-value=1.3e-07  Score=70.29  Aligned_cols=45  Identities=31%  Similarity=0.427  Sum_probs=41.3

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      .++.+++.+|.+||..+   ++|+|++|.||+++ ++.+++.|||++..
T Consensus        94 ~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        94 ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            47889999999999998   99999999999999 78999999998753


No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.50  E-value=1.7e-07  Score=82.85  Aligned_cols=145  Identities=26%  Similarity=0.287  Sum_probs=102.2

Q ss_pred             HHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCC-----------------------------
Q 028134            4 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVG-----------------------------   54 (213)
Q Consensus         4 ~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~-----------------------------   54 (213)
                      +..++.+.++||...   +.|+|+++.|.+...++..++.+|+........                             
T Consensus       910 i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~  986 (1205)
T KOG0606|consen  910 ILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSA  986 (1205)
T ss_pred             hHHHHhhhhccccch---hhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCcccccccccccccccc
Confidence            345677899999887   899999999999999999999998732221100                             


Q ss_pred             CCCcccccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhccc
Q 028134           55 DNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDP  134 (213)
Q Consensus        55 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (213)
                      ..........++..|.+||...+......+|+|++|++++|.++|..||.-.....                ....+++.
T Consensus       987 ~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~----------------~f~ni~~~ 1050 (1205)
T KOG0606|consen  987 DEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ----------------IFENILNR 1050 (1205)
T ss_pred             chhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh----------------hhhccccC
Confidence            00011223467889999999999988999999999999999999999996222111                11111111


Q ss_pred             c-cCCCCCHHHHHHHHHHHHhhcCcCCCCCCCHH
Q 028134          135 L-LHGRYPRRCLNYAVAVTAMCLNEEANFRPLIN  167 (213)
Q Consensus       135 ~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~  167 (213)
                      . -+..-+........+++...+..+|.+|-.+.
T Consensus      1051 ~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1051 DIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             CCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence            1 11122345566788888999999999997766


No 437
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.46  E-value=1.9e-07  Score=70.03  Aligned_cols=45  Identities=31%  Similarity=0.456  Sum_probs=41.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      .++.+++.++.+||..+   ++|+|++|.||+++ ++.++++|||.+..
T Consensus        99 ~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         99 ELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             HHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            57889999999999998   99999999999999 78899999998753


No 438
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.45  E-value=1.4e-07  Score=80.60  Aligned_cols=45  Identities=27%  Similarity=0.393  Sum_probs=41.1

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      +++.|++.+|.+||+.+   ++|+|+||+||++ .++.++++|||++..
T Consensus       432 ~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        432 ELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             HHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            47889999999999998   9999999999999 678899999999864


No 439
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.30  E-value=1.6e-06  Score=73.50  Aligned_cols=90  Identities=14%  Similarity=0.200  Sum_probs=64.1

Q ss_pred             HHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCCc
Q 028134            4 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLK   83 (213)
Q Consensus         4 ~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~   83 (213)
                      ++||+.||.|||..++  ++|++|.-+.|+++..|.-+|++|.++........  ..........|..|+.....  ...
T Consensus       110 l~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s--~~s  183 (690)
T KOG1243|consen  110 LFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPS--EWS  183 (690)
T ss_pred             HHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCcc--ccc
Confidence            6899999999986554  99999999999999999999999988754211111  11111122235555532211  145


Q ss_pred             cceeeHHHHHHHHHhC
Q 028134           84 SDIYSFGVVLLELITG   99 (213)
Q Consensus        84 ~Di~slG~~~~~l~~g   99 (213)
                      .|.|-|||++++++.|
T Consensus       184 ~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  184 IDSWGLGCLIEELFNG  199 (690)
T ss_pred             hhhhhHHHHHHHHhCc
Confidence            7999999999999998


No 440
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.29  E-value=6.5e-07  Score=74.66  Aligned_cols=147  Identities=20%  Similarity=0.223  Sum_probs=95.7

Q ss_pred             ChhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCC-CceEEeeeecccccCCCCCCccccccccccccc--Ccccccc
Q 028134            1 MKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDND-FNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC--APEYAMS   77 (213)
Q Consensus         1 l~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~Pe~~~~   77 (213)
                      +++..|++.++.++|+..   ++|.|++|+||++..+ +..++.||+.........     .......++.  ++.....
T Consensus       369 ~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~-----~~~~~~~r~~p~~~~~~e~  440 (524)
T KOG0601|consen  369 LRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSS-----GVFHHIDRLYPIAEILLED  440 (524)
T ss_pred             hhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccccccceec-----ccccccccccccchhhccc
Confidence            357789999999999988   9999999999999875 777899998875321111     1111222333  3444445


Q ss_pred             CCCCCccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcC
Q 028134           78 GKLTLKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLN  157 (213)
Q Consensus        78 ~~~~~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  157 (213)
                      ..+..+.|+++||.-+.+..++...-+...                   +. ..+....-...+..- .++..+...+..
T Consensus       441 ~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-------------------~~-~~i~~~~~p~~~~~~-~~~q~~~kv~~~  499 (524)
T KOG0601|consen  441 YPHLSKADIFSLGLSVDEAITGSPLSESGV-------------------QS-LTIRSGDTPNLPGLK-LQLQVLLKVMIN  499 (524)
T ss_pred             cccccccccccccccccccccCcccCcccc-------------------cc-eeeecccccCCCchH-HhhhhhhhhhcC
Confidence            567789999999999998888765332100                   00 011111111112222 667778888999


Q ss_pred             cCCCCCCCHHHHHHHHHHH
Q 028134          158 EEANFRPLINDIVVALDYL  176 (213)
Q Consensus       158 ~~p~~Rps~~ev~~~L~~l  176 (213)
                      .++..||.+.+........
T Consensus       500 ~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  500 PDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             Cccccchhhhhhcccchhh
Confidence            9999999998876654433


No 441
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves 
Probab=98.17  E-value=3.1e-06  Score=59.28  Aligned_cols=49  Identities=29%  Similarity=0.209  Sum_probs=41.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      .++.+++.+++.||.....+++|+|+++.|++++..+.+++.||+.+..
T Consensus        90 ~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          90 DIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             HHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            4578899999999985323399999999999999889999999998753


No 442
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.09  E-value=3.4e-06  Score=62.42  Aligned_cols=44  Identities=16%  Similarity=0.042  Sum_probs=38.2

Q ss_pred             hHHHHHHHHHHh-hcCCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            3 IAVGAARGLEYL-HCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         3 i~~ql~~al~~L-H~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      +..+++.++..| |..+   ++|+||++.||++. ++.+.++||+.+-.
T Consensus       129 i~~~i~~~l~~l~H~~g---lVHGDLs~~NIL~~-~~~v~iIDF~qav~  173 (197)
T cd05146         129 AYYQVLSMMKQLYKECN---LVHADLSEYNMLWH-DGKVWFIDVSQSVE  173 (197)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEEE-CCcEEEEECCCcee
Confidence            467899999988 8888   99999999999997 46799999998754


No 443
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.09  E-value=4.8e-06  Score=60.05  Aligned_cols=46  Identities=30%  Similarity=0.218  Sum_probs=38.9

Q ss_pred             hHHHHHHHHHHhhcCC--CCCeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134            3 IAVGAARGLEYLHCKA--NPPVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus         3 i~~ql~~al~~LH~~~--~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      ++.+++++++.||..+  ...++|+|+++.||+++ ++.++++||+.+.
T Consensus        88 ~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          88 NLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             HHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            4678999999999886  12359999999999998 6679999999875


No 444
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=97.82  E-value=2.1e-05  Score=61.23  Aligned_cols=45  Identities=20%  Similarity=0.209  Sum_probs=39.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCC-------CCceEEeeeeccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDN-------DFNPKLSDFGLAK   49 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~-------~~~~~l~d~~~~~   49 (213)
                      .++.+++..++-||..|   ++|+|+++.||+++.       +..+.++||+.+.
T Consensus       142 ~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        142 MLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            46778999999999999   999999999999974       4678999999875


No 445
>PF06293 Kdo:  Lipopolysaccharide kinase (Kdo/WaaP) family;  InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=97.82  E-value=2.1e-05  Score=58.97  Aligned_cols=46  Identities=28%  Similarity=0.316  Sum_probs=41.0

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC---ceEEeeeecccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF---NPKLSDFGLAKL   50 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~---~~~l~d~~~~~~   50 (213)
                      .++.+++..++-||..|   ++|+|+++.|||+..+.   .+.++||+.+..
T Consensus       122 ~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  122 ELLRALARLIAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            46788999999999999   99999999999998776   788999998764


No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.79  E-value=3.7e-05  Score=55.87  Aligned_cols=44  Identities=27%  Similarity=0.412  Sum_probs=38.0

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      ++..+-.-+.-||..+   |+|+||.++|+++.... +.++|||+...
T Consensus        97 ~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          97 LLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             HHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence            5667777889999998   99999999999998765 88899999863


No 447
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=97.71  E-value=5.6e-05  Score=63.06  Aligned_cols=46  Identities=26%  Similarity=0.212  Sum_probs=38.7

Q ss_pred             hHHHHHH-HHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeeccccc
Q 028134            3 IAVGAAR-GLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLG   51 (213)
Q Consensus         3 i~~ql~~-al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~   51 (213)
                      ++.+++. .+..+|..|   ++|+|++|.||++..++.++++|||++...
T Consensus       261 ia~~~~~~~l~ql~~~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       261 LAENLARSFLNQVLRDG---FFHADLHPGNIFVLKDGKIIALDFGIVGRL  307 (437)
T ss_pred             HHHHHHHHHHHHHHhCC---ceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence            4455555 467889888   999999999999999999999999998653


No 448
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.50  E-value=0.00019  Score=52.32  Aligned_cols=45  Identities=38%  Similarity=0.518  Sum_probs=37.6

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCC---ceEEeeeecccc
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDF---NPKLSDFGLAKL   50 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~---~~~l~d~~~~~~   50 (213)
                      ++..+-+.|.-||..+   ++|+||..+||++..++   .+.++|||++..
T Consensus       118 ~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  118 LARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             HHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence            5677888899999998   99999999999995443   347999999864


No 449
>PF01163 RIO1:  RIO1 family;  InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date.   Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=97.50  E-value=0.00017  Score=53.12  Aligned_cols=44  Identities=27%  Similarity=0.331  Sum_probs=33.2

Q ss_pred             hHHHHHHHHHH-hhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            3 IAVGAARGLEY-LHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         3 i~~ql~~al~~-LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      ++.+++..+.. +|..|   ++|+|+...||+++.+ .+.++||+.+..
T Consensus       111 ~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iIDf~qav~  155 (188)
T PF01163_consen  111 LLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYIIDFGQAVD  155 (188)
T ss_dssp             HHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE--GTTEEE
T ss_pred             HHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEEecCccee
Confidence            45677775555 57888   9999999999999877 899999998764


No 450
>PRK09902 hypothetical protein; Provisional
Probab=97.23  E-value=0.00041  Score=51.84  Aligned_cols=46  Identities=9%  Similarity=0.030  Sum_probs=40.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCc--eEEeeeecccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFN--PKLSDFGLAKL   50 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~--~~l~d~~~~~~   50 (213)
                      .++.+++..|+-||..|   +.|+|+-+.||+++..+.  +.++||..++.
T Consensus       132 ~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        132 AMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            46788999999999999   999999999999976666  88999987654


No 451
>PF06176 WaaY:  Lipopolysaccharide core biosynthesis protein (WaaY);  InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=96.96  E-value=0.0011  Score=49.78  Aligned_cols=42  Identities=19%  Similarity=0.182  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134            4 AVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus         4 ~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      .-.+++++.-||..|   ++|+|.+|.|++++.++ +++.|++...
T Consensus       141 ~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-i~iID~~~k~  182 (229)
T PF06176_consen  141 AEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-IRIIDTQGKR  182 (229)
T ss_pred             HHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-EEEEECcccc
Confidence            356788999999999   99999999999998555 8899997654


No 452
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=96.91  E-value=0.004  Score=52.28  Aligned_cols=77  Identities=19%  Similarity=0.320  Sum_probs=58.6

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCC
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLT   81 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~   81 (213)
                      .++.||..||.++|+.|   +.-+-|.+.+|+++.+..+++..+|...........              |  +.   .-
T Consensus       397 ~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~~--------------~--le---~~  454 (655)
T KOG3741|consen  397 SYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPTE--------------P--LE---SQ  454 (655)
T ss_pred             HHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCCCCc--------------c--hh---HH
Confidence            36789999999999998   887999999999999989999888876543222211              1  11   12


Q ss_pred             CccceeeHHHHHHHHHhCC
Q 028134           82 LKSDIYSFGVVLLELITGR  100 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~  100 (213)
                      .+-|.-.||.+++.+.+|.
T Consensus       455 Qq~D~~~lG~ll~aLAt~~  473 (655)
T KOG3741|consen  455 QQNDLRDLGLLLLALATGT  473 (655)
T ss_pred             hhhhHHHHHHHHHHHhhcc
Confidence            4458888999999999984


No 453
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=96.33  E-value=0.0049  Score=52.71  Aligned_cols=37  Identities=19%  Similarity=0.209  Sum_probs=31.1

Q ss_pred             HHhhcCCCCCeEecCCCCCceeeCCCC----ceEEeeeeccccc
Q 028134           12 EYLHCKANPPVIYRDLKSANILLDNDF----NPKLSDFGLAKLG   51 (213)
Q Consensus        12 ~~LH~~~~~~~vH~dl~~~nil~~~~~----~~~l~d~~~~~~~   51 (213)
                      ..+...|   ++|+|+||.||+++.++    .++++|||+....
T Consensus       274 ~Qif~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l  314 (537)
T PRK04750        274 TQVFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL  314 (537)
T ss_pred             HHHHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence            3345566   99999999999998887    8999999998654


No 454
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=96.27  E-value=0.0086  Score=46.45  Aligned_cols=45  Identities=20%  Similarity=0.144  Sum_probs=36.4

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      ++..|++-+..+-..|   +||+|+..-||+++.+|.+.++||-.+..
T Consensus       207 il~~il~~~~~~~~~G---iVHGDlSefNIlV~~dg~~~vIDwPQ~v~  251 (304)
T COG0478         207 ILDKILEEVRKAYRRG---IVHGDLSEFNILVTEDGDIVVIDWPQAVP  251 (304)
T ss_pred             HHHHHHHHHHHHHHcC---ccccCCchheEEEecCCCEEEEeCccccc
Confidence            3455566666666677   99999999999999999999999987653


No 455
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=95.44  E-value=0.043  Score=50.55  Aligned_cols=137  Identities=21%  Similarity=0.224  Sum_probs=84.0

Q ss_pred             hHHHHHHHHHHhhcCCCCCeEecCCCCC---ceeeCCCCceEEe--eeecccccCCCCCCcccccccccccccCcccccc
Q 028134            3 IAVGAARGLEYLHCKANPPVIYRDLKSA---NILLDNDFNPKLS--DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMS   77 (213)
Q Consensus         3 i~~ql~~al~~LH~~~~~~~vH~dl~~~---nil~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   77 (213)
                      +..++.+|++++|+..   ..|.-+...   +.-.+..+.....  ||+..........   .........+.++|....
T Consensus       291 ~~~~~~~GL~~~h~~~---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~---~~~~~~~~~~~~~e~~~~  364 (1351)
T KOG1035|consen  291 LHQKLLEGLAYLHSLS---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK---SFSDLLAEIRNADEDLKE  364 (1351)
T ss_pred             HHHHHhhhHHHHHHhc---cceeEEecccccccccCccceeecchhhhcccccCCCccc---chhhcCcccccccccccc
Confidence            5678889999999886   666666555   3333444555544  7776654322221   112233445677776665


Q ss_pred             CCCC--CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhh
Q 028134           78 GKLT--LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMC  155 (213)
Q Consensus        78 ~~~~--~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  155 (213)
                      ..+.  ...|+|.+|....-+..|..+-...                   .....+++.        .....+.+....|
T Consensus       365 ~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~-------------------~~~~~~l~~--------~~~~~~~d~~~~~  417 (1351)
T KOG1035|consen  365 NTAKKSRLTDLWCLGLLLLQLSQGEDISEKS-------------------AVPVSLLDV--------LSTSELLDALPKC  417 (1351)
T ss_pred             ccchhhhhhHHHHHHHHHhhhhhcCcccccc-------------------cchhhhhcc--------ccchhhhhhhhhh
Confidence            4443  4479999999999888765443211                   111111111        1111567778899


Q ss_pred             cCcCCCCCCCHHHHHHH
Q 028134          156 LNEEANFRPLINDIVVA  172 (213)
Q Consensus       156 l~~~p~~Rps~~ev~~~  172 (213)
                      +..++++|+++.+++..
T Consensus       418 ~~~~~~~Rl~~~~ll~~  434 (1351)
T KOG1035|consen  418 LDEDSEERLSALELLTH  434 (1351)
T ss_pred             cchhhhhccchhhhhhc
Confidence            99999999999999874


No 456
>PF12260 PIP49_C:  Protein-kinase domain of FAM69;  InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=95.43  E-value=0.03  Score=41.29  Aligned_cols=48  Identities=25%  Similarity=0.112  Sum_probs=41.7

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      +++.++++.+.+|+......+.-.|++++|+.++.++.+++.|.....
T Consensus        63 ~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~  110 (188)
T PF12260_consen   63 KIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVF  110 (188)
T ss_pred             HHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcc
Confidence            689999999999997543348999999999999999999999987654


No 457
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=95.32  E-value=0.023  Score=43.60  Aligned_cols=44  Identities=23%  Similarity=0.216  Sum_probs=37.0

Q ss_pred             hHHHHHHHHHHhhc-CCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            3 IAVGAARGLEYLHC-KANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         3 i~~ql~~al~~LH~-~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      +..++++.+.-|-. .+   +||+||..-|||+. ++.+.++|++.+-.
T Consensus       171 ~~~~~v~~~~~l~~~a~---LVHgDLSEyNiL~~-~~~p~iID~~QaV~  215 (268)
T COG1718         171 LYEDVVEYMRRLYKEAG---LVHGDLSEYNILVH-DGEPYIIDVSQAVT  215 (268)
T ss_pred             HHHHHHHHHHHHHHhcC---cccccchhhheEEE-CCeEEEEECccccc
Confidence            45677788888877 55   99999999999999 78899999998753


No 458
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=94.97  E-value=0.024  Score=42.38  Aligned_cols=30  Identities=23%  Similarity=0.349  Sum_probs=25.8

Q ss_pred             CCeEecCCCCCceeeCC--CCceEEeeeeccc
Q 028134           20 PPVIYRDLKSANILLDN--DFNPKLSDFGLAK   49 (213)
Q Consensus        20 ~~~vH~dl~~~nil~~~--~~~~~l~d~~~~~   49 (213)
                      ..++|+|+++.||+++.  ++.+.++||+.+.
T Consensus       174 ~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         174 PGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             cEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence            34899999999999988  5667899999875


No 459
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=94.31  E-value=0.083  Score=40.25  Aligned_cols=29  Identities=24%  Similarity=0.306  Sum_probs=24.9

Q ss_pred             CeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      .++|+|+.+.|++++.+....++||+.+.
T Consensus       165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             eEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            48999999999999876656799999865


No 460
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=93.71  E-value=0.16  Score=40.21  Aligned_cols=29  Identities=38%  Similarity=0.348  Sum_probs=25.6

Q ss_pred             CeEecCCCCCceeeCCC----CceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDND----FNPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~----~~~~l~d~~~~~   49 (213)
                      .++|+|+.+.||+++.+    +.+.++||..+.
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            48999999999999874    789999999874


No 461
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=93.70  E-value=0.098  Score=41.58  Aligned_cols=29  Identities=38%  Similarity=0.390  Sum_probs=25.5

Q ss_pred             CeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      .++|+|+++.|++++.++.+.++||+.+.
T Consensus       188 ~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       188 GVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             ccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            49999999999999888767899998764


No 462
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=93.35  E-value=0.079  Score=40.27  Aligned_cols=28  Identities=14%  Similarity=0.148  Sum_probs=25.0

Q ss_pred             CeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      .++|+|+.+.|++++.++ +.++||+.+.
T Consensus       154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            479999999999999877 8999999765


No 463
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=93.10  E-value=0.076  Score=40.62  Aligned_cols=30  Identities=23%  Similarity=0.142  Sum_probs=26.0

Q ss_pred             CCeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134           20 PPVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus        20 ~~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      +.++|+|+.+.||+++.++.+.|+||+.+.
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            348999999999999987777899998764


No 464
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=93.10  E-value=0.09  Score=39.90  Aligned_cols=29  Identities=28%  Similarity=0.329  Sum_probs=25.5

Q ss_pred             CeEecCCCCCceeeCC-CCceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDN-DFNPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~-~~~~~l~d~~~~~   49 (213)
                      .++|+|+.+.||+++. ++.+.++||..+.
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            3899999999999987 5779999998764


No 465
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=93.03  E-value=0.16  Score=39.67  Aligned_cols=43  Identities=26%  Similarity=0.196  Sum_probs=31.9

Q ss_pred             HHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134            6 GAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus         6 ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      .+-.++.-.+... ..++|+|+.+.|++.+..+.++|+||..+.
T Consensus       140 ~l~~~l~~~~~~~-~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg  182 (269)
T COG0510         140 ELRRALEEVPKDD-LVPCHNDLNPGNLLLTDKGGLFLIDWEYAG  182 (269)
T ss_pred             HHHHHhhhcCCCc-eeeecCCCCccceEEcCCCcEEEEecccCC
Confidence            3334444444330 137999999999999999999999998775


No 466
>PF01636 APH:  Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.;  InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=93.00  E-value=0.062  Score=40.33  Aligned_cols=29  Identities=38%  Similarity=0.409  Sum_probs=20.0

Q ss_pred             CeEecCCCCCceeeC-CCCceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLD-NDFNPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~-~~~~~~l~d~~~~~   49 (213)
                      .++|+|+.+.||+++ .++.+.++||+.+.
T Consensus       167 ~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  167 VLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             EEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             EEEEeccccccceeeeccceeEEEecccce
Confidence            389999999999998 56666799998764


No 467
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=92.88  E-value=0.14  Score=41.73  Aligned_cols=46  Identities=35%  Similarity=0.389  Sum_probs=37.4

Q ss_pred             hhHHHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134            2 KIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus         2 ~i~~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      +++++.+..+.-+.++  .++-||++...||+++ +|.+.|+||.+++.
T Consensus       325 sff~s~~sil~~lekk--f~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         325 SFFWSCISILDILEKK--FPFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             HHHHHHHHHHhhhhhc--CCcccccccccceeee-cCceEEEEeeeeec
Confidence            4667766666666653  4589999999999999 99999999999874


No 468
>PF07387 Seadorna_VP7:  Seadornavirus VP7;  InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=92.71  E-value=0.14  Score=38.93  Aligned_cols=38  Identities=26%  Similarity=0.192  Sum_probs=31.8

Q ss_pred             HHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeee
Q 028134            8 ARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFG   46 (213)
Q Consensus         8 ~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~   46 (213)
                      +.+|...|+. .+..+|+|..|+||+-+..|-+||.|=+
T Consensus       151 i~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~  188 (308)
T PF07387_consen  151 IKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPV  188 (308)
T ss_pred             HHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChh
Confidence            4567888865 3449999999999999999999999854


No 469
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=92.68  E-value=0.17  Score=39.92  Aligned_cols=29  Identities=38%  Similarity=0.372  Sum_probs=25.6

Q ss_pred             CeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      .++|+|+.+.|++++.++.+.+.||+.+.
T Consensus       176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         176 GVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             cCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            38999999999999987777899998765


No 470
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=92.58  E-value=0.22  Score=39.43  Aligned_cols=28  Identities=25%  Similarity=0.277  Sum_probs=24.0

Q ss_pred             CeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      .++|+|+.+.|++++. +.+.+.||+.+.
T Consensus       188 ~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       188 GFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             ceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            3899999999999987 567899998754


No 471
>PRK05231 homoserine kinase; Provisional
Probab=92.57  E-value=0.085  Score=42.12  Aligned_cols=29  Identities=34%  Similarity=0.360  Sum_probs=25.0

Q ss_pred             CeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      .++|+|+.+.||+++.+....++||+.+.
T Consensus       188 ~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        188 GVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             ccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            39999999999999876666899999875


No 472
>PRK10271 thiK thiamine kinase; Provisional
Probab=92.56  E-value=0.1  Score=38.46  Aligned_cols=28  Identities=18%  Similarity=0.234  Sum_probs=24.4

Q ss_pred             CeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      ..+|+|+.|.|++++.++ ++++||+.+.
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~  105 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAG  105 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCccc
Confidence            369999999999998777 8899999875


No 473
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=92.41  E-value=0.11  Score=40.20  Aligned_cols=28  Identities=21%  Similarity=0.258  Sum_probs=24.6

Q ss_pred             CeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      .++|+|+.+.||+++.++ +.++||+.+.
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            489999999999998877 7899998875


No 474
>PF01633 Choline_kinase:  Choline/ethanolamine kinase;  InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome.  Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=92.26  E-value=0.11  Score=38.97  Aligned_cols=28  Identities=39%  Similarity=0.493  Sum_probs=20.2

Q ss_pred             eEecCCCCCceee-CCCCceEEeeeeccc
Q 028134           22 VIYRDLKSANILL-DNDFNPKLSDFGLAK   49 (213)
Q Consensus        22 ~vH~dl~~~nil~-~~~~~~~l~d~~~~~   49 (213)
                      +.|+|+.+.||++ ..++.++++||..+.
T Consensus       145 ~cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  145 FCHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             EE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             EeeccCccccEEeccCCCeEEEecHHHHh
Confidence            7999999999999 888999999998775


No 475
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=91.46  E-value=0.19  Score=40.25  Aligned_cols=32  Identities=25%  Similarity=0.455  Sum_probs=28.1

Q ss_pred             CCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134           19 NPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus        19 ~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      ++.++|+|+++.|++++..+-+-+.||+++..
T Consensus       197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l  228 (321)
T COG3173         197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELATL  228 (321)
T ss_pred             CceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence            44699999999999999888899999998864


No 476
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported 
Probab=91.22  E-value=0.18  Score=39.55  Aligned_cols=30  Identities=33%  Similarity=0.483  Sum_probs=24.7

Q ss_pred             CeEecCCCCCceeeCCCCc-eEEeeeecccc
Q 028134           21 PVIYRDLKSANILLDNDFN-PKLSDFGLAKL   50 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~~~-~~l~d~~~~~~   50 (213)
                      .++|+|+++.|++++.++. .-|.||+.+..
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            4899999999999987454 56999998753


No 477
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=90.10  E-value=0.3  Score=36.15  Aligned_cols=29  Identities=31%  Similarity=0.352  Sum_probs=24.0

Q ss_pred             CeEecCCCCCceeeCCCC-----ceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDNDF-----NPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~~-----~~~l~d~~~~~   49 (213)
                      .++|+|+.+.|+++..++     .+.+.||..+.
T Consensus       121 vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~  154 (196)
T smart00587      121 VLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH  154 (196)
T ss_pred             EEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence            389999999999997543     57899998875


No 478
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=89.93  E-value=0.16  Score=44.15  Aligned_cols=88  Identities=25%  Similarity=0.199  Sum_probs=63.1

Q ss_pred             HHHHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCCcc
Q 028134            5 VGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKS   84 (213)
Q Consensus         5 ~ql~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~   84 (213)
                      +.-++++++||+..   -+|+|    ||+... +..++.+|+.........   ......++..+++||......+..+.
T Consensus       343 r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p  411 (829)
T KOG0576|consen  343 RKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCP  411 (829)
T ss_pred             hhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc---ccccCCCCCCCCCchhhcccccccCC
Confidence            33456788888764   57887    555443 668888998876432222   23456788999999999988999999


Q ss_pred             ceeeHHHHHHHHHhCCCCc
Q 028134           85 DIYSFGVVLLELITGRKAM  103 (213)
Q Consensus        85 Di~slG~~~~~l~~g~~p~  103 (213)
                      |.|+++.-..++--|..|-
T Consensus       412 ~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  412 DSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             CccCCCcchhhcCCCCCCC
Confidence            9999997666666665554


No 479
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=89.24  E-value=0.36  Score=38.96  Aligned_cols=28  Identities=36%  Similarity=0.553  Sum_probs=24.6

Q ss_pred             eEecCCCCCceeeCCCCc-eEEeeeeccc
Q 028134           22 VIYRDLKSANILLDNDFN-PKLSDFGLAK   49 (213)
Q Consensus        22 ~vH~dl~~~nil~~~~~~-~~l~d~~~~~   49 (213)
                      ++|+|+.+.||+++.+.. +.+.||+-+.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            899999999999988774 7899998764


No 480
>PLN02236 choline kinase
Probab=89.10  E-value=0.36  Score=39.17  Aligned_cols=29  Identities=24%  Similarity=0.344  Sum_probs=25.0

Q ss_pred             CeEecCCCCCceeeCC-CCceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDN-DFNPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~-~~~~~l~d~~~~~   49 (213)
                      .++|+|+++.||+++. ++.+.++||..+.
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            3899999999999976 4679999998875


No 481
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=88.26  E-value=0.33  Score=38.68  Aligned_cols=30  Identities=17%  Similarity=0.222  Sum_probs=26.8

Q ss_pred             CeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134           21 PVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      .++|+|+.+.|++++.++.+.++||..+..
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            489999999999999988899999988753


No 482
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=88.17  E-value=0.86  Score=39.11  Aligned_cols=30  Identities=30%  Similarity=0.305  Sum_probs=28.0

Q ss_pred             eEecCCCCCceeeCCCCceEEeeeeccccc
Q 028134           22 VIYRDLKSANILLDNDFNPKLSDFGLAKLG   51 (213)
Q Consensus        22 ~vH~dl~~~nil~~~~~~~~l~d~~~~~~~   51 (213)
                      +.|.|.+|-|+++..+|.+.+.|||.....
T Consensus       286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l  315 (517)
T COG0661         286 FFHADPHPGNILVRSDGRIVLLDFGIVGRL  315 (517)
T ss_pred             ccccCCCccceEEecCCcEEEEcCcceecC
Confidence            999999999999999999999999998654


No 483
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=87.83  E-value=1.1  Score=37.29  Aligned_cols=30  Identities=20%  Similarity=0.337  Sum_probs=25.2

Q ss_pred             CCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134           20 PPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus        20 ~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      ..++|+|+.+.||++..+ .++++|+.++..
T Consensus       223 ~~l~HgDl~~gni~~~~~-~~~viD~E~a~~  252 (401)
T PRK09550        223 EALLHGDLHTGSIFVTEE-ETKVIDPEFAFY  252 (401)
T ss_pred             CceeeccCCcccEEeeCC-CcEEEecccccc
Confidence            349999999999999766 588999987764


No 484
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=87.48  E-value=0.17  Score=43.19  Aligned_cols=82  Identities=20%  Similarity=0.250  Sum_probs=43.0

Q ss_pred             CccceeeHHHHHHHHHhCCCCccccCCCCccchhhchhhhhhhhhhhhhhcccccCCCCCHHHHHHHHHHHHhhcCcCCC
Q 028134           82 LKSDIYSFGVVLLELITGRKAMDLSKGQGEQNLVSWSRPFLKDQKKFVHLVDPLLHGRYPRRCLNYAVAVTAMCLNEEAN  161 (213)
Q Consensus        82 ~~~Di~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  161 (213)
                      +++|||++|.++.++..|...+..-........+   ..+...+.......-..   .+--.++..+.++...|+-..|.
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i---~k~~~~d~~~~~~a~e~---~~~~~~d~~~~~~~~~c~~~~~~  183 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEIL---LKYYTDDQELLSTAMEH---LIQLLADKKRLPLLKKCLWLEPI  183 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHH---HHhccCchhHHHHHHHH---HHHHhhhHhHHHHhccCCccccc
Confidence            6999999999999998876544311111111000   00111001000000000   11235666778888889888888


Q ss_pred             CCCCHHHH
Q 028134          162 FRPLINDI  169 (213)
Q Consensus       162 ~Rps~~ev  169 (213)
                      .||...++
T Consensus       184 ir~l~~~~  191 (725)
T KOG1093|consen  184 IRPLPMEL  191 (725)
T ss_pred             cccchhHH
Confidence            87755443


No 485
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=86.74  E-value=1.3  Score=35.78  Aligned_cols=28  Identities=25%  Similarity=0.344  Sum_probs=24.5

Q ss_pred             eEecCCCCCceeeCC-CCceEEeeeeccc
Q 028134           22 VIYRDLKSANILLDN-DFNPKLSDFGLAK   49 (213)
Q Consensus        22 ~vH~dl~~~nil~~~-~~~~~l~d~~~~~   49 (213)
                      ++|+|+.+.||+++. ++.++++||..+.
T Consensus       184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             EEECCCCcccEEEeCCCCcEEEEcccccC
Confidence            699999999999964 5789999999874


No 486
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=85.52  E-value=1.5  Score=35.63  Aligned_cols=39  Identities=21%  Similarity=0.189  Sum_probs=31.9

Q ss_pred             HHHHHHHhhcCCCCCeEecCCCCCceeeCCCCceEEeeeecc
Q 028134            7 AARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLA   48 (213)
Q Consensus         7 l~~al~~LH~~~~~~~vH~dl~~~nil~~~~~~~~l~d~~~~   48 (213)
                      +..-|.-|-.+|   +||+|..--||++..++.++++||-..
T Consensus       211 lm~~Iv~la~~G---lIHgDFNEFNimv~dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  211 LMGLIVRLANHG---LIHGDFNEFNIMVKDDDKIVVIDFPQM  249 (465)
T ss_pred             HHHHHHHHHHcC---ceecccchheeEEecCCCEEEeechHh
Confidence            334455666677   999999999999999999999999654


No 487
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=85.37  E-value=0.073  Score=50.92  Aligned_cols=80  Identities=20%  Similarity=0.132  Sum_probs=62.0

Q ss_pred             eEecCCCCCceeeCCCCceEEeeeecccccCCCCCCcccccccccccccCccccccCCCCCccceeeHHHHHHHHHhCCC
Q 028134           22 VIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRK  101 (213)
Q Consensus        22 ~vH~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~~~~l~~g~~  101 (213)
                      .+|+++|+-|.++..+..++++++|+.+..  .......+...+++.|+.++.....+++.+.|+|..++.+|..-.|..
T Consensus      1361 ~v~~~Lkf~lpmIVtny~v~~gk~gLdKIk--np~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~ 1438 (2724)
T KOG1826|consen 1361 NVSKSLKFTLPMIVTNYNVKLGKGGLDKIK--NPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNA 1438 (2724)
T ss_pred             chhhhhhhhccceecCCccccccccccccc--CchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccH
Confidence            689999999999999999999999998721  122233445566777888876666677777999999999998887766


Q ss_pred             Cc
Q 028134          102 AM  103 (213)
Q Consensus       102 p~  103 (213)
                      +|
T Consensus      1439 ~f 1440 (2724)
T KOG1826|consen 1439 YF 1440 (2724)
T ss_pred             HH
Confidence            55


No 488
>PRK11768 serine/threonine protein kinase; Provisional
Probab=82.32  E-value=2  Score=34.59  Aligned_cols=27  Identities=30%  Similarity=0.409  Sum_probs=22.6

Q ss_pred             CeEecCCCCCceeeCCCCceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDNDFNPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~~~~~l~d~~~~~   49 (213)
                      .++|+|+.+.||+++ + .+.++||+-+.
T Consensus       197 ~liHgD~h~~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        197 LRLHGDCHPGNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             cceecCCCchhcccc-C-CcEEEeCCCCC
Confidence            389999999999995 3 57789998765


No 489
>PRK12396 5-methylribose kinase; Reviewed
Probab=81.42  E-value=2.2  Score=35.39  Aligned_cols=31  Identities=26%  Similarity=0.348  Sum_probs=25.8

Q ss_pred             CCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134           19 NPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus        19 ~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      ...++|+|+++-||+++.+. .+++|..++..
T Consensus       226 ~~aLlHGDlHtGSI~v~~~~-~kvIDpEFAfy  256 (409)
T PRK12396        226 AQALIHGDLHTGSVFVKNDS-TKVIDPEFAFY  256 (409)
T ss_pred             chhhccCcCCCCCEEecCCc-eEEEccccccc
Confidence            34599999999999998764 88899887764


No 490
>PRK06148 hypothetical protein; Provisional
Probab=81.30  E-value=1.4  Score=41.27  Aligned_cols=29  Identities=45%  Similarity=0.440  Sum_probs=24.1

Q ss_pred             eEecCCCCCceeeCCCC--ce-EEeeeecccc
Q 028134           22 VIYRDLKSANILLDNDF--NP-KLSDFGLAKL   50 (213)
Q Consensus        22 ~vH~dl~~~nil~~~~~--~~-~l~d~~~~~~   50 (213)
                      ++|+|+.+.||+++.++  .+ -|+|||-+..
T Consensus       205 vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        205 VIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             eECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            99999999999998764  44 4899997754


No 491
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=80.99  E-value=1.4  Score=36.01  Aligned_cols=30  Identities=23%  Similarity=0.269  Sum_probs=24.6

Q ss_pred             CCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134           20 PPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus        20 ~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      ..++|+|+.+.||+++.++ ++++|+..+..
T Consensus       192 ~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~  221 (370)
T TIGR01767       192 ETLLHGDLHSGSIFVSEHE-TKVIDPEFAFY  221 (370)
T ss_pred             ceeeeccCCcccEEEcCCC-CEEEcCccccc
Confidence            3499999999999997655 77899987654


No 492
>PF02958 EcKinase:  Ecdysteroid kinase;  InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=80.25  E-value=1.1  Score=35.28  Aligned_cols=29  Identities=34%  Similarity=0.383  Sum_probs=23.1

Q ss_pred             CeEecCCCCCceeeCCC--C---ceEEeeeeccc
Q 028134           21 PVIYRDLKSANILLDND--F---NPKLSDFGLAK   49 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~~--~---~~~l~d~~~~~   49 (213)
                      .++|+|++..|+++..+  |   .+++.||-.++
T Consensus       216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~  249 (294)
T PF02958_consen  216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLAR  249 (294)
T ss_pred             EEEcCccCHHhEeEccccccccccceeecccccc
Confidence            48999999999999554  3   57888887764


No 493
>PLN02756 S-methyl-5-thioribose kinase
Probab=78.17  E-value=3.9  Score=34.12  Aligned_cols=31  Identities=16%  Similarity=0.273  Sum_probs=25.2

Q ss_pred             CCCeEecCCCCCceeeCCCCceEEeeeecccc
Q 028134           19 NPPVIYRDLKSANILLDNDFNPKLSDFGLAKL   50 (213)
Q Consensus        19 ~~~~vH~dl~~~nil~~~~~~~~l~d~~~~~~   50 (213)
                      .+.++|+|+.+-||+++.++ .++.|..++..
T Consensus       229 ~~~L~HGDl~~g~i~~~~~~-~~~id~ef~~~  259 (418)
T PLN02756        229 AQALVHGDLHTGSVMVTPDS-TQVIDPEFAFY  259 (418)
T ss_pred             ccceeecCCCCCcEEEcCCC-ceEecchhhcc
Confidence            45699999999999998876 78888776553


No 494
>PLN02876 acyl-CoA dehydrogenase
Probab=78.06  E-value=2.4  Score=38.79  Aligned_cols=30  Identities=17%  Similarity=0.344  Sum_probs=23.7

Q ss_pred             CeEecCCCCCceeeCC-CCc-eEEeeeecccc
Q 028134           21 PVIYRDLKSANILLDN-DFN-PKLSDFGLAKL   50 (213)
Q Consensus        21 ~~vH~dl~~~nil~~~-~~~-~~l~d~~~~~~   50 (213)
                      .++|+|+++.|++++. ++. +-|.||+++..
T Consensus       226 ~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~  257 (822)
T PLN02876        226 GIVHGDFRIDNLVFHPTEDRVIGILDWELSTL  257 (822)
T ss_pred             ceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence            4999999999999975 333 46889988754


No 495
>PRK10593 hypothetical protein; Provisional
Probab=77.78  E-value=2.3  Score=33.77  Aligned_cols=28  Identities=14%  Similarity=0.123  Sum_probs=21.6

Q ss_pred             CCCeEecCCCCCceeeCCC-Cc-eEEeeee
Q 028134           19 NPPVIYRDLKSANILLDND-FN-PKLSDFG   46 (213)
Q Consensus        19 ~~~~vH~dl~~~nil~~~~-~~-~~l~d~~   46 (213)
                      .+.++|+|+.+.|++++.+ +. ..+.|..
T Consensus       192 ~psLlHGDlw~gNvl~~~~~~~i~~liDPa  221 (297)
T PRK10593        192 NCVLVHGNFTLRSMLKDPRSDQLLAMLNPG  221 (297)
T ss_pred             CCeeEeCCCCcccEEECCCCCceEEEECch
Confidence            4569999999999999865 43 5676755


No 496
>PRK06149 hypothetical protein; Provisional
Probab=76.66  E-value=2.8  Score=39.11  Aligned_cols=29  Identities=21%  Similarity=0.219  Sum_probs=23.2

Q ss_pred             eEecCCCCCceeeCCC--Cc---eEEeeeecccc
Q 028134           22 VIYRDLKSANILLDND--FN---PKLSDFGLAKL   50 (213)
Q Consensus        22 ~vH~dl~~~nil~~~~--~~---~~l~d~~~~~~   50 (213)
                      ++|+|+...||+++.+  +.   .-++|||-+..
T Consensus       210 ~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~~  243 (972)
T PRK06149        210 AVHLDITDDNVVGSRDADGRWQPDGVIDFGDLVR  243 (972)
T ss_pred             ccCCCCCcccEEEcCCCCCCcceeEEEEcccchh
Confidence            9999999999999754  22   36889987653


No 497
>PHA03111 Ser/Thr kinase; Provisional
Probab=76.50  E-value=2.6  Score=34.25  Aligned_cols=14  Identities=43%  Similarity=0.496  Sum_probs=13.0

Q ss_pred             eEecCCCCCceeeC
Q 028134           22 VIYRDLKSANILLD   35 (213)
Q Consensus        22 ~vH~dl~~~nil~~   35 (213)
                      ++|.||||+|||+-
T Consensus       304 F~H~DLKPdNILiF  317 (444)
T PHA03111        304 FLHVDLKPDNILIF  317 (444)
T ss_pred             eeeccCCCCcEEEe
Confidence            89999999999993


No 498
>KOG3960 consensus Myogenic helix-loop-helix transcription factor [Transcription]
Probab=76.11  E-value=12  Score=28.77  Aligned_cols=42  Identities=19%  Similarity=0.154  Sum_probs=30.2

Q ss_pred             HHHHHHHHHHHhhcCcCCCCCCCHHHHH-------HHHHHHhhccCCCc
Q 028134          143 RCLNYAVAVTAMCLNEEANFRPLINDIV-------VALDYLVSQRDSHP  184 (213)
Q Consensus       143 ~~~~~~~~li~~cl~~~p~~Rps~~ev~-------~~L~~l~~~~~~~~  184 (213)
                      .-..+.++.+++|-..||.+|-.--||+       +.|+.|+.+.+...
T Consensus       131 kKVNEAFE~LKRrT~~NPNQRLPKVEILRsAI~YIE~Lq~LL~~~~~~~  179 (284)
T KOG3960|consen  131 KKVNEAFETLKRRTSSNPNQRLPKVEILRSAIRYIERLQALLQEQDQAE  179 (284)
T ss_pred             HHHHHHHHHHHhhcCCCccccccHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            3455788999999999999995544444       45677777666544


No 499
>PF05445 Pox_ser-thr_kin:  Poxvirus serine/threonine protein kinase;  InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=74.92  E-value=2.8  Score=34.15  Aligned_cols=13  Identities=46%  Similarity=0.649  Sum_probs=12.6

Q ss_pred             eEecCCCCCceee
Q 028134           22 VIYRDLKSANILL   34 (213)
Q Consensus        22 ~vH~dl~~~nil~   34 (213)
                      ++|.||||+|||+
T Consensus       300 F~H~DLKPdNILi  312 (434)
T PF05445_consen  300 FLHVDLKPDNILI  312 (434)
T ss_pred             eeecccCcCcEEE
Confidence            8999999999999


No 500
>PF10707 YrbL-PhoP_reg:  PhoP regulatory network protein YrbL;  InterPro: IPR019647  This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. 
Probab=74.11  E-value=7.6  Score=28.92  Aligned_cols=36  Identities=28%  Similarity=0.322  Sum_probs=25.2

Q ss_pred             HHHHhhcCCCCCeEecCCCCCceeeCCC--C--ceEEee-eecc
Q 028134           10 GLEYLHCKANPPVIYRDLKSANILLDND--F--NPKLSD-FGLA   48 (213)
Q Consensus        10 al~~LH~~~~~~~vH~dl~~~nil~~~~--~--~~~l~d-~~~~   48 (213)
                      -..+|-...   |+.+|++|.||++..+  +  .+.++| ||..
T Consensus       130 f~~~l~~~~---Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~  170 (199)
T PF10707_consen  130 FKRYLLDHH---IVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEK  170 (199)
T ss_pred             HHHHHHHcC---CeecCCCcccEEEEecCCCceEEEEEeCCCCc
Confidence            356666666   9999999999999432  2  466776 4443


Done!