Your job contains 1 sequence.
>028136
MAMNSLPLSTLFTALPVSQITQHRQTTTASDAILGSFQIATRRNMSNTLRLYLACIRNTL
DAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEKCLIETSINSLRISLKV
KQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHCEEMQKHKLIDFIV
QFMEDIDKEISELKMSVNTRGRLVATEFLKQFV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028136
(213 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
DICTYBASE|DDB_G0269102 - symbol:arcD "actin-related prote... 596 5.1e-58 1
UNIPROTKB|Q148J6 - symbol:ARPC4 "Actin-related protein 2/... 596 5.1e-58 1
UNIPROTKB|P59998 - symbol:ARPC4 "Actin-related protein 2/... 596 5.1e-58 1
MGI|MGI:1915339 - symbol:Arpc4 "actin related protein 2/3... 596 5.1e-58 1
RGD|1310096 - symbol:Arpc4 "actin related protein 2/3 com... 596 5.1e-58 1
UNIPROTKB|F1SQE6 - symbol:ARPC4 "Uncharacterized protein"... 592 1.4e-57 1
UNIPROTKB|F8WCF6 - symbol:ARPC4 "Actin-related protein 2/... 590 2.2e-57 1
ZFIN|ZDB-GENE-010724-9 - symbol:arpc4 "actin related prot... 588 3.6e-57 1
UNIPROTKB|E2QWU0 - symbol:ARPC4 "Uncharacterized protein"... 586 5.9e-57 1
FB|FBgn0031781 - symbol:Arpc4 "Actin-related protein 2/3 ... 573 1.4e-55 1
ASPGD|ASPL0000073271 - symbol:AN8698 species:162425 "Emer... 559 4.3e-54 1
POMBASE|SPAC6G9.07c - symbol:arc4 "ARP2/3 actin-organizin... 546 1.0e-52 1
WB|WBGene00000204 - symbol:arx-6 species:6239 "Caenorhabd... 534 1.9e-51 1
SGD|S000001496 - symbol:ARC19 "Subunit of the ARP2/3 comp... 522 3.6e-50 1
UNIPROTKB|H7C0A3 - symbol:ARPC4-TTLL3 "Protein ARPC4-TTLL... 256 5.3e-45 2
UNIPROTKB|F1P010 - symbol:F1P010 "Uncharacterized protein... 463 6.4e-44 1
UNIPROTKB|F8WDD7 - symbol:ARPC4 "Actin-related protein 2/... 361 4.1e-33 1
UNIPROTKB|F6TTL5 - symbol:ARPC4 "Actin-related protein 2/... 304 4.5e-27 1
UNIPROTKB|F8WE39 - symbol:ARPC4 "Actin-related protein 2/... 139 1.4e-09 1
UNIPROTKB|F8WDW3 - symbol:ARPC4 "Actin-related protein 2/... 137 2.2e-09 1
>DICTYBASE|DDB_G0269102 [details] [associations]
symbol:arcD "actin-related protein 2/3 complex,
subunit 4" species:44689 "Dictyostelium discoideum" [GO:0030670
"phagocytic vesicle membrane" evidence=IDA] [GO:0006909
"phagocytosis" evidence=IEP] [GO:0006887 "exocytosis" evidence=IEP]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005885 "Arp2/3 protein
complex" evidence=IEA;IDA] [GO:0030864 "cortical actin
cytoskeleton" evidence=IC] [GO:0030175 "filopodium" evidence=IC]
[GO:0051015 "actin filament binding" evidence=TAS] [GO:0045335
"phagocytic vesicle" evidence=TAS] [GO:0045010 "actin nucleation"
evidence=TAS] [GO:0030041 "actin filament polymerization"
evidence=IEA;TAS] [GO:0006928 "cellular component movement"
evidence=TAS] [GO:0031252 "cell leading edge" evidence=IDA]
[GO:0031143 "pseudopodium" evidence=IEA;IDA] [GO:0034314 "Arp2/3
complex-mediated actin nucleation" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0005938 "cell cortex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005905
"coated pit" evidence=IDA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR008384 Pfam:PF05856
dictyBase:DDB_G0269102 GO:GO:0005829 GO:GO:0031252
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0030670
GO:GO:0006909 GO:GO:0006928 GO:GO:0030175 GO:GO:0031143
GO:GO:0030041 GO:GO:0030864 GO:GO:0006887 GO:GO:0045010
GO:GO:0005885 eggNOG:NOG261545 KO:K05755 OMA:MCLENFS
PANTHER:PTHR22629 EMBL:AF095933 RefSeq:XP_646414.1
ProteinModelPortal:O96625 SMR:O96625 STRING:O96625 PRIDE:O96625
EnsemblProtists:DDB0191121 GeneID:8617371 KEGG:ddi:DDB_G0269102
ProtClustDB:PTZ00278 Uniprot:O96625
Length = 169
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 112/168 (66%), Positives = 142/168 (84%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEK 104
MS YL CIRNTL A++CLQNF Q VERHNKPEVE+KTS EL+LNP++I RN+ E+
Sbjct: 1 MSTAQVPYLNCIRNTLTASMCLQNFGSQIVERHNKPEVEVKTSKELVLNPVIIARNKNER 60
Query: 105 CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 164
LIETSINS+RIS+ +K++DE++ IL KKF+RFL RAE F +LRRKPV+GYDISFL+TN
Sbjct: 61 VLIETSINSIRISVSIKKSDEVDVILAKKFVRFLQQRAENFIILRRKPVEGYDISFLVTN 120
Query: 165 YHCEEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 212
+H E M KHKL+DFI+QFMEDID+EIS+LK+++N RGR+VA+E+LK F
Sbjct: 121 FHTENMFKHKLVDFIIQFMEDIDREISDLKLTLNARGRIVASEYLKNF 168
>UNIPROTKB|Q148J6 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9913 "Bos taurus" [GO:0042995 "cell projection"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated
actin nucleation" evidence=IEA] [GO:0030041 "actin filament
polymerization" evidence=IEA] [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] InterPro:IPR008384 Pfam:PF05856 GO:GO:0005737
GO:GO:0005856 GO:GO:0030041 GO:GO:0042995 PDB:1K8K PDB:1TYQ
PDB:1U2V PDB:2P9I PDB:2P9K PDB:2P9L PDB:2P9N PDB:2P9P PDB:2P9S
PDB:2P9U PDB:3DXK PDB:3DXM PDB:3RSE PDBsum:1K8K PDBsum:1TYQ
PDBsum:1U2V PDBsum:2P9I PDBsum:2P9K PDBsum:2P9L PDBsum:2P9N
PDBsum:2P9P PDBsum:2P9S PDBsum:2P9U PDBsum:3DXK PDBsum:3DXM
PDBsum:3RSE EMBL:BC118263 IPI:IPI00708767 RefSeq:NP_001069631.1
UniGene:Bt.106660 ProteinModelPortal:Q148J6 SMR:Q148J6
DIP:DIP-29794N STRING:Q148J6 PRIDE:Q148J6
Ensembl:ENSBTAT00000010469 GeneID:539459 KEGG:bta:539459 CTD:10093
eggNOG:NOG261545 GeneTree:ENSGT00390000016233 HOGENOM:HOG000202303
HOVERGEN:HBG050582 InParanoid:Q148J6 KO:K05755 OMA:MCLENFS
OrthoDB:EOG4HDSVQ EvolutionaryTrace:Q148J6 NextBio:20878000
PANTHER:PTHR22629 Uniprot:Q148J6
Length = 168
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 114/168 (67%), Positives = 139/168 (82%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEK 104
M+ TLR YL+ +R TL AALCL+NF Q VERHNKPEVE+++S ELLL P+ I RNE EK
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60
Query: 105 CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 164
LIE SINS+R+S+ VKQADE+E IL KF+RF+ MRAE F +LRRKPV+GYDISFLITN
Sbjct: 61 VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120
Query: 165 YHCEEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 212
+H E+M KHKL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
>UNIPROTKB|P59998 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9606 "Homo sapiens" [GO:0030041 "actin filament
polymerization" evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated
actin nucleation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0005885 "Arp2/3 protein complex" evidence=IDA] [GO:0030674
"protein binding, bridging" evidence=IPI] [GO:0051015 "actin
filament binding" evidence=NAS] [GO:0045010 "actin nucleation"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR008384 Pfam:PF05856 GO:GO:0005737 GO:GO:0030041
GO:GO:0042995 GO:GO:0045010 GO:GO:0005885 CTD:10093
eggNOG:NOG261545 HOGENOM:HOG000202303 HOVERGEN:HBG050582 KO:K05755
OrthoDB:EOG4HDSVQ PANTHER:PTHR22629 EMBL:AF019888 EMBL:AF006087
EMBL:BC012596 IPI:IPI00554811 RefSeq:NP_005709.1 UniGene:Hs.323342
ProteinModelPortal:P59998 SMR:P59998 DIP:DIP-33188N IntAct:P59998
STRING:P59998 PhosphoSite:P59998 DMDM:38372625 PaxDb:P59998
PRIDE:P59998 DNASU:10093 Ensembl:ENST00000397261 GeneID:10093
KEGG:hsa:10093 UCSC:uc003bsz.2 GeneCards:GC03P009834 HGNC:HGNC:707
MIM:604226 neXtProt:NX_P59998 PharmGKB:PA25002 ChiTaRS:ARPC4
GenomeRNAi:10093 NextBio:38169 ArrayExpress:P59998 Bgee:P59998
CleanEx:HS_ARPC4 Genevestigator:P59998 GermOnline:ENSG00000156983
Uniprot:P59998
Length = 168
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 114/168 (67%), Positives = 139/168 (82%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEK 104
M+ TLR YL+ +R TL AALCL+NF Q VERHNKPEVE+++S ELLL P+ I RNE EK
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60
Query: 105 CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 164
LIE SINS+R+S+ VKQADE+E IL KF+RF+ MRAE F +LRRKPV+GYDISFLITN
Sbjct: 61 VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120
Query: 165 YHCEEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 212
+H E+M KHKL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
>MGI|MGI:1915339 [details] [associations]
symbol:Arpc4 "actin related protein 2/3 complex, subunit 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003779 "actin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005885 "Arp2/3 protein complex" evidence=ISO;TAS] [GO:0008150
"biological_process" evidence=ND] [GO:0030041 "actin filament
polymerization" evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated
actin nucleation" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR008384 Pfam:PF05856 MGI:MGI:1915339
GO:GO:0005737 GO:GO:0030041 GO:GO:0042995 GO:GO:0005885 CTD:10093
eggNOG:NOG261545 GeneTree:ENSGT00390000016233 HOGENOM:HOG000202303
HOVERGEN:HBG050582 KO:K05755 OMA:MCLENFS PANTHER:PTHR22629
EMBL:AJ278129 EMBL:AK017993 EMBL:AK039215 EMBL:AK077325
EMBL:AK133626 EMBL:AK136082 EMBL:AK150690 EMBL:AK153380
EMBL:AK166440 EMBL:BC015280 IPI:IPI00138691 RefSeq:NP_001163956.1
RefSeq:NP_001163957.1 RefSeq:NP_080828.1 UniGene:Mm.289306
UniGene:Mm.472172 ProteinModelPortal:P59999 SMR:P59999
IntAct:P59999 STRING:P59999 PhosphoSite:P59999 PaxDb:P59999
PRIDE:P59999 Ensembl:ENSMUST00000156898 GeneID:68089 KEGG:mmu:68089
UCSC:uc009dfs.2 InParanoid:P59999 NextBio:326392 Bgee:P59999
CleanEx:MM_ARPC4 Genevestigator:P59999
GermOnline:ENSMUSG00000072846 Uniprot:P59999
Length = 168
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 114/168 (67%), Positives = 139/168 (82%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEK 104
M+ TLR YL+ +R TL AALCL+NF Q VERHNKPEVE+++S ELLL P+ I RNE EK
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60
Query: 105 CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 164
LIE SINS+R+S+ VKQADE+E IL KF+RF+ MRAE F +LRRKPV+GYDISFLITN
Sbjct: 61 VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120
Query: 165 YHCEEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 212
+H E+M KHKL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
>RGD|1310096 [details] [associations]
symbol:Arpc4 "actin related protein 2/3 complex, subunit 4"
species:10116 "Rattus norvegicus" [GO:0005885 "Arp2/3 protein
complex" evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] InterPro:IPR008384 Pfam:PF05856
RGD:1310096 GO:GO:0005856 GO:GO:0030041 CTD:10093 eggNOG:NOG261545
GeneTree:ENSGT00390000016233 HOGENOM:HOG000202303
HOVERGEN:HBG050582 KO:K05755 OrthoDB:EOG4HDSVQ PANTHER:PTHR22629
EMBL:CH473957 EMBL:BC167049 IPI:IPI00372040 RefSeq:NP_001100085.2
UniGene:Rn.198683 SMR:B2RZ72 MINT:MINT-7138173 STRING:B2RZ72
Ensembl:ENSRNOT00000011937 GeneID:297518 KEGG:rno:297518
UCSC:RGD:1310096 NextBio:642364 Genevestigator:B2RZ72
Uniprot:B2RZ72
Length = 168
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 114/168 (67%), Positives = 139/168 (82%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEK 104
M+ TLR YL+ +R TL AALCL+NF Q VERHNKPEVE+++S ELLL P+ I RNE EK
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60
Query: 105 CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 164
LIE SINS+R+S+ VKQADE+E IL KF+RF+ MRAE F +LRRKPV+GYDISFLITN
Sbjct: 61 VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120
Query: 165 YHCEEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 212
+H E+M KHKL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
>UNIPROTKB|F1SQE6 [details] [associations]
symbol:ARPC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0005885 "Arp2/3 protein complex" evidence=IEA]
InterPro:IPR008384 Pfam:PF05856 GO:GO:0005856 GO:GO:0030041
GeneTree:ENSGT00390000016233 OMA:MCLENFS PANTHER:PTHR22629
EMBL:CU633418 UniGene:Ssc.51863 Ensembl:ENSSSCT00000012642
Uniprot:F1SQE6
Length = 167
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 113/165 (68%), Positives = 137/165 (83%)
Query: 48 TLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEKCLI 107
TLR YL+ +R TL AALCL+NF Q VERHNKPEVE+++S ELLL P+ I RNE EK LI
Sbjct: 3 TLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLI 62
Query: 108 ETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHC 167
E SINS+R+S+ VKQADE+E IL KF+RF+ MRAE F +LRRKPV+GYDISFLITN+H
Sbjct: 63 EGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHT 122
Query: 168 EEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 212
E+M KHKL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 123 EQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 167
>UNIPROTKB|F8WCF6 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9606 "Homo sapiens" [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] InterPro:IPR008384 Pfam:PF05856
GO:GO:0005856 GO:GO:0030041 PANTHER:PTHR22629 HGNC:HGNC:707
ChiTaRS:ARPC4 EMBL:AC022382 IPI:IPI00925334
ProteinModelPortal:F8WCF6 SMR:F8WCF6 Ensembl:ENST00000424442
ArrayExpress:F8WCF6 Bgee:F8WCF6 Uniprot:F8WCF6
Length = 181
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 113/166 (68%), Positives = 138/166 (83%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEK 104
M+ TLR YL+ +R TL AALCL+NF Q VERHNKPEVE+++S ELLL P+ I RNE EK
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60
Query: 105 CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 164
LIE SINS+R+S+ VKQADE+E IL KF+RF+ MRAE F +LRRKPV+GYDISFLITN
Sbjct: 61 VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120
Query: 165 YHCEEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLK 210
+H E+M KHKL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLK 166
>ZFIN|ZDB-GENE-010724-9 [details] [associations]
symbol:arpc4 "actin related protein 2/3 complex,
subunit 4" species:7955 "Danio rerio" [GO:0034314 "Arp2/3
complex-mediated actin nucleation" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030041 "actin filament
polymerization" evidence=IEA] [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] InterPro:IPR008384 Pfam:PF05856
ZFIN:ZDB-GENE-010724-9 GO:GO:0005856 GO:GO:0030041
GeneTree:ENSGT00390000016233 PANTHER:PTHR22629 EMBL:CR450814
IPI:IPI00504792 Ensembl:ENSDART00000146470 ArrayExpress:E9QJ46
Bgee:E9QJ46 Uniprot:E9QJ46
Length = 193
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 112/165 (67%), Positives = 137/165 (83%)
Query: 48 TLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEKCLI 107
TLR YL +R TL AALCL+NF Q VERHNKPEVE+++S ELLL P++I RN+ EK LI
Sbjct: 29 TLRPYLNAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVVISRNDKEKVLI 88
Query: 108 ETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHC 167
E SINS+R+S+ VKQADE+E IL KF+RF+ MRAE F +LRRKPV+GYDISFLITN+H
Sbjct: 89 EGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHT 148
Query: 168 EEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 212
E+M KHKL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 149 EQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 193
>UNIPROTKB|E2QWU0 [details] [associations]
symbol:ARPC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] [GO:0030041 "actin filament
polymerization" evidence=IEA] [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] InterPro:IPR008384 Pfam:PF05856 GO:GO:0005856
GO:GO:0030041 GeneTree:ENSGT00390000016233 OMA:MCLENFS
PANTHER:PTHR22629 EMBL:AAEX03012078 ProteinModelPortal:E2QWU0
PRIDE:E2QWU0 Ensembl:ENSCAFT00000008564 NextBio:20852177
Uniprot:E2QWU0
Length = 167
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 112/163 (68%), Positives = 136/163 (83%)
Query: 48 TLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEKCLI 107
TLR YL+ +R TL AALCL+NF Q VERHNKPEVE+++S ELLL P+ I RNE EK LI
Sbjct: 4 TLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLI 63
Query: 108 ETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNYHC 167
E SINS+R+S+ VKQADE+E IL KF+RF+ MRAE F +LRRKPV+GYDISFLITN+H
Sbjct: 64 EGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHT 123
Query: 168 EEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLK 210
E+M KHKL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK
Sbjct: 124 EQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLK 166
>FB|FBgn0031781 [details] [associations]
symbol:Arpc4 "Actin-related protein 2/3 complex, subunit 4"
species:7227 "Drosophila melanogaster" [GO:0003779 "actin binding"
evidence=ISS] [GO:0005200 "structural constituent of cytoskeleton"
evidence=ISS] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=ISS] [GO:0005885 "Arp2/3 protein complex"
evidence=ISS] [GO:0008360 "regulation of cell shape" evidence=IMP]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] [GO:0030031 "cell projection assembly" evidence=IMP]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0042060
"wound healing" evidence=IMP] [GO:0000902 "cell morphogenesis"
evidence=IMP] InterPro:IPR008384 Pfam:PF05856 GO:GO:0003779
GO:GO:0006911 EMBL:AE014134 GO:GO:0008360 GO:GO:0005856
GO:GO:0030866 GO:GO:0030041 GO:GO:0000902 GO:GO:0042060
GO:GO:0030031 eggNOG:NOG261545 GeneTree:ENSGT00390000016233
KO:K05755 OMA:MCLENFS PANTHER:PTHR22629 EMBL:AY113475 EMBL:BT125913
RefSeq:NP_608996.1 UniGene:Dm.30772 SMR:Q9VMH2 IntAct:Q9VMH2
MINT:MINT-319668 STRING:Q9VMH2 EnsemblMetazoa:FBtr0079200
GeneID:33864 KEGG:dme:Dmel_CG5972 UCSC:CG5972-RA CTD:33864
FlyBase:FBgn0031781 InParanoid:Q9VMH2 OrthoDB:EOG4WM39X
GenomeRNAi:33864 NextBio:785680 Uniprot:Q9VMH2
Length = 168
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 106/168 (63%), Positives = 138/168 (82%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEK 104
M+ TL+ YL +R++L AA+CLQ+FP Q VERHNKPEVE+ +S EL+L P+++ RNE EK
Sbjct: 1 MAATLKPYLTAVRHSLTAAMCLQDFPSQVVERHNKPEVEICSSKELVLTPVVVSRNEREK 60
Query: 105 CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 164
LIE SINS+R+S+ VKQADE+E IL KF RF+ RAE+F +LRRKP++GYDISFLITN
Sbjct: 61 VLIEPSINSVRVSIAVKQADEIERILCHKFTRFMMRRAESFVILRRKPIEGYDISFLITN 120
Query: 165 YHCEEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 212
+H E+M KHKL+DF++ FME+IDKEISE+K++VN R R A EFLK+F
Sbjct: 121 FHTEQMYKHKLVDFVISFMEEIDKEISEMKLAVNARARTCAEEFLKRF 168
>ASPGD|ASPL0000073271 [details] [associations]
symbol:AN8698 species:162425 "Emericella nidulans"
[GO:0030041 "actin filament polymerization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005885 "Arp2/3 protein
complex" evidence=IEA] [GO:0030479 "actin cortical patch"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0000147 "actin
cortical patch assembly" evidence=IEA] [GO:0034314 "Arp2/3
complex-mediated actin nucleation" evidence=IEA] InterPro:IPR008384
Pfam:PF05856 GO:GO:0005856 GO:GO:0030041 EMBL:BN001303 OMA:MCLENFS
PANTHER:PTHR22629 EnsemblFungi:CADANIAT00006374 Uniprot:C8VA50
Length = 169
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 106/168 (63%), Positives = 134/168 (79%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEK 104
MS +LR YL C+R++L AAL + NF Q ERHN PE+E +SPELLLNP+ I RNE EK
Sbjct: 1 MSQSLRPYLQCVRSSLTAALAISNFASQTSERHNVPEIEAASSPELLLNPLTISRNENEK 60
Query: 105 CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 164
LIE S+NS+R+S+++KQADE+E+IL KF RFL+ RAE+F +LRRKPV+GYDISFLITN
Sbjct: 61 VLIEPSVNSVRVSIRIKQADEIEHILVHKFERFLTQRAESFFILRRKPVKGYDISFLITN 120
Query: 165 YHCEEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 212
+H E M KHKL+DFI+QFME++DKEISE+K+ +N R R VA FL F
Sbjct: 121 FHTEAMLKHKLVDFILQFMEEVDKEISEMKLFLNARARFVAESFLTPF 168
>POMBASE|SPAC6G9.07c [details] [associations]
symbol:arc4 "ARP2/3 actin-organizing complex subunit
Arc4" species:4896 "Schizosaccharomyces pombe" [GO:0000147 "actin
cortical patch assembly" evidence=IC] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005885 "Arp2/3 protein complex"
evidence=IDA] [GO:0006897 "endocytosis" evidence=IC] [GO:0030479
"actin cortical patch" evidence=IDA] [GO:0034314 "Arp2/3
complex-mediated actin nucleation" evidence=IDA] InterPro:IPR008384
Pfam:PF05856 PomBase:SPAC6G9.07c GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006897 GO:GO:0030479
GO:GO:0000147 GO:GO:0030041 GO:GO:0005885 GO:GO:0034314 PDB:3DWL
PDBsum:3DWL eggNOG:NOG261545 HOGENOM:HOG000202303 KO:K05755
OMA:MCLENFS PANTHER:PTHR22629 EMBL:AB010050 PIR:T39069 PIR:T43309
RefSeq:NP_594116.1 ProteinModelPortal:Q92352 SMR:Q92352
IntAct:Q92352 STRING:Q92352 PRIDE:Q92352 EnsemblFungi:SPAC6G9.07c.1
GeneID:2541767 KEGG:spo:SPAC6G9.07c OrthoDB:EOG4J6W16
EvolutionaryTrace:Q92352 NextBio:20802858 Uniprot:Q92352
Length = 168
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 102/168 (60%), Positives = 136/168 (80%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEK 104
MSNTLR YL +R+TL A+L L+ F + VER ++PEVE+ SPE+LL P+++ RNE E+
Sbjct: 1 MSNTLRPYLNAVRSTLTASLALEEFSSEIVERQSQPEVEVGRSPEILLKPLVVSRNEQEQ 60
Query: 105 CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 164
CLIE+S+NS+R S+++KQ DE+E IL +KF++FL RAE+F +LRRKPVQGYDISFLITN
Sbjct: 61 CLIESSVNSVRFSIRIKQVDEIERILVRKFMQFLMGRAESFFILRRKPVQGYDISFLITN 120
Query: 165 YHCEEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 212
YH EEM KHKL+DFI++FME++D EISE+K+ +N R RLVA +L F
Sbjct: 121 YHTEEMLKHKLVDFIIEFMEEVDAEISEMKLFLNGRARLVAETYLSCF 168
>WB|WBGene00000204 [details] [associations]
symbol:arx-6 species:6239 "Caenorhabditis elegans"
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030041 "actin
filament polymerization" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0043652
"engulfment of apoptotic cell" evidence=IMP] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IMP] [GO:0010631
"epithelial cell migration" evidence=IMP] InterPro:IPR008384
Pfam:PF05856 GO:GO:0009792 GO:GO:0005737 GO:GO:0040010
GO:GO:0005856 GO:GO:0030041 GO:GO:0016331 GO:GO:0043652
GO:GO:0010631 eggNOG:NOG261545 GeneTree:ENSGT00390000016233
HOGENOM:HOG000202303 KO:K05755 OMA:MCLENFS PANTHER:PTHR22629
EMBL:FO080789 RefSeq:NP_498020.1 ProteinModelPortal:P58798
SMR:P58798 STRING:P58798 PaxDb:P58798 EnsemblMetazoa:C35D10.16
GeneID:175650 KEGG:cel:CELE_C35D10.16 UCSC:C35D10.16 CTD:175650
WormBase:C35D10.16 InParanoid:P58798 NextBio:889060 Uniprot:P58798
Length = 169
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 102/168 (60%), Positives = 133/168 (79%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEK 104
MS TL+ YL +R+TL AALCL+ F Q VERHNKPEVE++TS ELL+ P+++ RN+ E+
Sbjct: 1 MSATLQPYLEAVRHTLQAALCLEQFSSQVVERHNKPEVEVQTSKELLMTPVVVARNKQER 60
Query: 105 CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 164
LIE S+NS+RIS+ +KQ+DE+E IL KF RF+ RA+ F VLRRKP+ GYDISFLIT
Sbjct: 61 VLIEPSVNSVRISIAIKQSDEIEKILCHKFTRFMCQRADNFFVLRRKPLPGYDISFLITA 120
Query: 165 YHCEEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 212
H E M KHKL+DF++ FM++IDKEISE+K+S+N R R+ A EFLK+F
Sbjct: 121 SHTEAMFKHKLVDFLLHFMQEIDKEISEMKLSLNARARVSAEEFLKRF 168
>SGD|S000001496 [details] [associations]
symbol:ARC19 "Subunit of the ARP2/3 complex" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000001 "mitochondrion inheritance" evidence=TAS] [GO:0034314
"Arp2/3 complex-mediated actin nucleation" evidence=IEA]
[GO:0005885 "Arp2/3 protein complex" evidence=IEA;IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0000147 "actin cortical patch assembly"
evidence=IMP] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0030479 "actin cortical patch" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IMP]
InterPro:IPR008384 Pfam:PF05856 SGD:S000001496 GO:GO:0005198
EMBL:BK006944 GO:GO:0030479 GO:GO:0000001 GO:GO:0000147
GO:GO:0030041 GO:GO:0005885 eggNOG:NOG261545
GeneTree:ENSGT00390000016233 HOGENOM:HOG000202303 KO:K05755
OMA:MCLENFS PANTHER:PTHR22629 OrthoDB:EOG4J6W16 EMBL:X74152
EMBL:S53418 EMBL:Z28013 EMBL:AY558348 PIR:S37826 RefSeq:NP_012912.1
ProteinModelPortal:P33204 SMR:P33204 DIP:DIP-1819N IntAct:P33204
MINT:MINT-382542 STRING:P33204 PaxDb:P33204 PeptideAtlas:P33204
EnsemblFungi:YKL013C GeneID:853856 KEGG:sce:YKL013C CYGD:YKL013c
NextBio:975097 Genevestigator:P33204 GermOnline:YKL013C
Uniprot:P33204
Length = 171
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 105/170 (61%), Positives = 129/170 (75%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVEL-KTSPELLLNPILICRNEAE 103
MS +LR YL +R +L+AAL L NF QEVERHN+PEVE+ TS ELLL P+ I RNE E
Sbjct: 1 MSQSLRPYLTAVRYSLEAALTLSNFSSQEVERHNRPEVEVPNTSAELLLQPMHISRNENE 60
Query: 104 KCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLIT 163
+ LIE S+NS+R+SL VKQADE+E IL KF RFL RAEAF +LRR P+ GY ISFLIT
Sbjct: 61 QVLIEPSVNSVRMSLMVKQADEIEQILVHKFTRFLEQRAEAFYILRRVPIPGYSISFLIT 120
Query: 164 NYHCEEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFV 213
N H E M+ KL+DFI++FMED+DKEISE+K+ +N R R VA +L +FV
Sbjct: 121 NKHTESMKTGKLVDFIIEFMEDVDKEISEIKLFLNARARFVAEAYLDEFV 170
>UNIPROTKB|H7C0A3 [details] [associations]
symbol:ARPC4-TTLL3 "Protein ARPC4-TTLL3" species:9606 "Homo
sapiens" [GO:0005885 "Arp2/3 protein complex" evidence=IEA]
[GO:0030041 "actin filament polymerization" evidence=IEA]
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] InterPro:IPR008384 Pfam:PF05856 GO:GO:0005856
GO:GO:0030041 PANTHER:PTHR22629 EMBL:AC022382
ProteinModelPortal:H7C0A3 Ensembl:ENST00000453882 HGNC:HGNC:38830
ChiTaRS:ARPC4-TTLL3 Uniprot:H7C0A3
Length = 167
Score = 256 (95.2 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 51/84 (60%), Positives = 65/84 (77%)
Query: 48 TLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEKCLI 107
TLR YL+ +R TL AALCL+NF Q VERHNKPEVE+++S ELLL P+ I RNE EK LI
Sbjct: 4 TLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLI 63
Query: 108 ETSINSLRISLKVKQADELENILT 131
E SINS+R+S+ VKQ ++ ++T
Sbjct: 64 EGSINSVRVSIAVKQGYDISFLIT 87
Score = 234 (87.4 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 42/57 (73%), Positives = 51/57 (89%)
Query: 154 QGYDISFLITNYHCEEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLK 210
QGYDISFLITN+H E+M KHKL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK
Sbjct: 78 QGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLK 134
>UNIPROTKB|F1P010 [details] [associations]
symbol:F1P010 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005885 "Arp2/3 protein complex" evidence=IEA]
[GO:0030041 "actin filament polymerization" evidence=IEA]
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] InterPro:IPR008384 Pfam:PF05856 GO:GO:0005856
GO:GO:0030041 GeneTree:ENSGT00390000016233 PANTHER:PTHR22629
EMBL:AADN02014160 IPI:IPI00586861 Ensembl:ENSGALT00000010814
OMA:SFLIPFD Uniprot:F1P010
Length = 128
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 87/128 (67%), Positives = 108/128 (84%)
Query: 85 KTSPELLLNPILICRNEAEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEA 144
++S ELLL P++I RNE EK LIE SINS+R+S+ VKQADE+E IL KF+RF+ MRAE
Sbjct: 1 RSSKELLLQPVIISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAEK 60
Query: 145 FQVLRRKPVQGYDISFLITNYHCEEMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLV 204
F +LRRKPV+GYDISFLITN+H E+M KHKL+DF++ FME+IDKEISE+K+SVN R R+V
Sbjct: 61 FFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIV 120
Query: 205 ATEFLKQF 212
A EFLK F
Sbjct: 121 AEEFLKNF 128
>UNIPROTKB|F8WDD7 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9606 "Homo sapiens" [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] InterPro:IPR008384 Pfam:PF05856
GO:GO:0005856 GO:GO:0030041 PANTHER:PTHR22629 HGNC:HGNC:707
ChiTaRS:ARPC4 EMBL:AC022382 IPI:IPI00926232
ProteinModelPortal:F8WDD7 SMR:F8WDD7 Ensembl:ENST00000440787
ArrayExpress:F8WDD7 Bgee:F8WDD7 Uniprot:F8WDD7
Length = 113
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 72/110 (65%), Positives = 88/110 (80%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEK 104
M+ TLR YL+ +R TL AALCL+NF Q VERHNKPEVE+++S ELLL P+ I RNE EK
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60
Query: 105 CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQ 154
LIE SINS+R+S+ VKQADE+E IL KF+RF+ MRAE F +LRRKPV+
Sbjct: 61 VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVE 110
>UNIPROTKB|F6TTL5 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9606 "Homo sapiens" [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] InterPro:IPR008384 Pfam:PF05856
GO:GO:0005856 GO:GO:0030041 CTD:10093 KO:K05755 PANTHER:PTHR22629
UniGene:Hs.323342 DNASU:10093 GeneID:10093 KEGG:hsa:10093
HGNC:HGNC:707 ChiTaRS:ARPC4 GenomeRNAi:10093 NextBio:38169
EMBL:AC022382 IPI:IPI00607772 RefSeq:NP_001020130.1
RefSeq:NP_001020131.1 SMR:F6TTL5 Ensembl:ENST00000287613
Ensembl:ENST00000498623 UCSC:uc003bta.2 Uniprot:F6TTL5
Length = 78
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 55/78 (70%), Positives = 68/78 (87%)
Query: 135 LRFLSMRAEAFQVLRRKPVQGYDISFLITNYHCEEMQKHKLIDFIVQFMEDIDKEISELK 194
+RF+ MRAE F +LRRKPV+GYDISFLITN+H E+M KHKL+DF++ FME+IDKEISE+K
Sbjct: 1 MRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMK 60
Query: 195 MSVNTRGRLVATEFLKQF 212
+SVN R R+VA EFLK F
Sbjct: 61 LSVNARARIVAEEFLKNF 78
>UNIPROTKB|F8WE39 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9606 "Homo sapiens" [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] InterPro:IPR008384 Pfam:PF05856
GO:GO:0005856 GO:GO:0030041 PANTHER:PTHR22629 HGNC:HGNC:707
ChiTaRS:ARPC4 EMBL:AC022382 IPI:IPI00924833
ProteinModelPortal:F8WE39 SMR:F8WE39 Ensembl:ENST00000418163
ArrayExpress:F8WE39 Bgee:F8WE39 Uniprot:F8WE39
Length = 47
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVELK 85
M+ TLR YL+ +R TL AALCL+NF Q VERHNKPEVE++
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVR 41
>UNIPROTKB|F8WDW3 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9606 "Homo sapiens" [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] InterPro:IPR008384 Pfam:PF05856
GO:GO:0005856 GO:GO:0030041 PANTHER:PTHR22629 HGNC:HGNC:707
ChiTaRS:ARPC4 EMBL:AC022382 IPI:IPI00925522
ProteinModelPortal:F8WDW3 SMR:F8WDW3 Ensembl:ENST00000417500
ArrayExpress:F8WDW3 Bgee:F8WDW3 Uniprot:F8WDW3
Length = 44
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 45 MSNTLRLYLACIRNTLDAALCLQNFPCQEVERHNKPEVEL 84
M+ TLR YL+ +R TL AALCL+NF Q VERHNKPEVE+
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEV 40
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.134 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 213 213 0.00084 112 3 11 22 0.44 32
31 0.49 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 573 (61 KB)
Total size of DFA: 146 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.56u 0.15s 20.71t Elapsed: 00:00:01
Total cpu time: 20.56u 0.15s 20.71t Elapsed: 00:00:01
Start: Fri May 10 04:10:53 2013 End: Fri May 10 04:10:54 2013