Your job contains 1 sequence.
>028137
MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV
TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK
VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSYI
IQSELRYSSTMIVIFFIILAIIFSYLSSTRASK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028137
(213 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2139514 - symbol:SQS1 "squalene synthase 1" sp... 784 6.2e-78 1
TAIR|locus:2139534 - symbol:SQS2 "squalene synthase 2" sp... 699 6.3e-69 1
UNIPROTKB|F1NFJ9 - symbol:FDFT1 "Uncharacterized protein"... 463 6.4e-44 1
DICTYBASE|DDB_G0292072 - symbol:fdfT "farnesyl-diphosphat... 462 8.1e-44 1
RGD|61834 - symbol:Fdft1 "farnesyl diphosphate farnesyl t... 444 6.6e-42 1
MGI|MGI:102706 - symbol:Fdft1 "farnesyl diphosphate farne... 443 8.4e-42 1
UNIPROTKB|Q32KR6 - symbol:FDFT1 "Squalene synthase" speci... 433 9.6e-41 1
UNIPROTKB|Q6IE76 - symbol:fdft1 "FDFT1 protein" species:9... 433 9.6e-41 1
UNIPROTKB|E2R6N6 - symbol:FDFT1 "Uncharacterized protein"... 433 9.6e-41 1
UNIPROTKB|B3KQ95 - symbol:FDFT1 "Squalene synthase" speci... 430 2.0e-40 1
UNIPROTKB|B4DJE5 - symbol:FDFT1 "cDNA FLJ50548, highly si... 430 2.0e-40 1
UNIPROTKB|B4DT56 - symbol:FDFT1 "cDNA FLJ50660, highly si... 430 2.0e-40 1
UNIPROTKB|B7Z1J3 - symbol:FDFT1 "Squalene synthase" speci... 430 2.0e-40 1
UNIPROTKB|E9PNM1 - symbol:FDFT1 "Squalene synthase" speci... 430 2.0e-40 1
UNIPROTKB|P37268 - symbol:FDFT1 "Squalene synthase" speci... 430 2.0e-40 1
UNIPROTKB|I3LFX7 - symbol:FDFT1 "Uncharacterized protein"... 428 3.3e-40 1
ZFIN|ZDB-GENE-081104-242 - symbol:si:ch73-107c13.2 "si:ch... 425 6.8e-40 1
CGD|CAL0000316 - symbol:ERG9 species:5476 "Candida albica... 384 1.5e-35 1
UNIPROTKB|Q59Y33 - symbol:ERG9 "Putative uncharacterized ... 384 1.5e-35 1
POMBASE|SPBC646.05c - symbol:erg9 "squalene synthase Erg9... 365 1.5e-33 1
SGD|S000001233 - symbol:ERG9 "Farnesyl-diphosphate farnes... 361 4.1e-33 1
ASPGD|ASPL0000036668 - symbol:AN10396 species:162425 "Eme... 346 1.6e-31 1
>TAIR|locus:2139514 [details] [associations]
symbol:SQS1 "squalene synthase 1" species:3702
"Arabidopsis thaliana" [GO:0004310 "farnesyl-diphosphate
farnesyltransferase activity" evidence=IEA;ISS;IDA] [GO:0008610
"lipid biosynthetic process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0006084 "acetyl-CoA metabolic process"
evidence=RCA] [GO:0006598 "polyamine catabolic process"
evidence=RCA] [GO:0009698 "phenylpropanoid metabolic process"
evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA;TAS] [GO:0016132 "brassinosteroid biosynthetic
process" evidence=RCA] [GO:0042398 "cellular modified amino acid
biosynthetic process" evidence=RCA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=TAS] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 GO:GO:0016021 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005789 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016491 GO:GO:0016126
EMBL:AL161585 EMBL:AL023094 GO:GO:0008299 UniPathway:UPA00767
EMBL:D29017 EMBL:X86692 EMBL:AF004560 EMBL:U79159 EMBL:AY099868
EMBL:BT003419 IPI:IPI00526988 PIR:S54251 RefSeq:NP_195190.1
UniGene:At.20898 UniGene:At.67805 ProteinModelPortal:P53799
SMR:P53799 IntAct:P53799 STRING:P53799 PaxDb:P53799 PRIDE:P53799
EnsemblPlants:AT4G34640.1 GeneID:829616 KEGG:ath:AT4G34640
TAIR:At4g34640 eggNOG:COG1562 HOGENOM:HOG000186940
InParanoid:P53799 KO:K00801 OMA:ELEEYCW PhylomeDB:P53799
ProtClustDB:CLSN2685914 BioCyc:ARA:AT4G34640-MONOMER
BioCyc:MetaCyc:AT4G34640-MONOMER Genevestigator:P53799
GermOnline:AT4G34640 GO:GO:0004310 GO:GO:0051996 TIGRFAMs:TIGR01559
Uniprot:P53799
Length = 410
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 145/180 (80%), Positives = 164/180 (91%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLEDINEIPK RMFWPREIW KY +KLEDLKYEEN++K+VQCLN+MV
Sbjct: 203 MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDLKYEENTNKSVQCLNEMV 262
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TNALMH+EDCLKYM +LRD +IFRFCAIPQIMAIGTLALCYNN +VFRGVVK+RRGLTAK
Sbjct: 263 TNALMHIEDCLKYMVSLRDPSIFRFCAIPQIMAIGTLALCYNNEQVFRGVVKLRRGLTAK 322
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSYI 180
VIDRT M DVY AFYDFS +LK K++KNDPNA+KTL+R+EA+QK C D+GVL RKSY+
Sbjct: 323 VIDRTKTMADVYGAFYDFSCMLKTKVDKNDPNASKTLNRLEAVQKLCRDAGVLQNRKSYV 382
>TAIR|locus:2139534 [details] [associations]
symbol:SQS2 "squalene synthase 2" species:3702
"Arabidopsis thaliana" [GO:0004310 "farnesyl-diphosphate
farnesyltransferase activity" evidence=IEA;IGI;ISS;IDA] [GO:0008610
"lipid biosynthetic process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=ISS] InterPro:IPR002060 InterPro:IPR006449 Pfam:PF00494
GO:GO:0016021 EMBL:CP002687 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016126 EMBL:AL161585 EMBL:AL023094 KO:K00801
ProtClustDB:CLSN2685914 GO:GO:0004310 TIGRFAMs:TIGR01559
HSSP:P37268 IPI:IPI00518901 PIR:E85408 PIR:T05285
RefSeq:NP_195191.2 UniGene:At.54604 ProteinModelPortal:O65688
SMR:O65688 STRING:O65688 PRIDE:O65688 EnsemblPlants:AT4G34650.1
GeneID:829617 KEGG:ath:AT4G34650 TAIR:At4g34650 InParanoid:O65688
OMA:SYVNDET PhylomeDB:O65688 ArrayExpress:O65688
Genevestigator:O65688 Uniprot:O65688
Length = 413
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 131/179 (73%), Positives = 155/179 (86%)
Query: 2 GLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVT 61
GLFLQKTNII+DYLEDINE PK RMFWPREIW KYV+KLED K EE + KAVQCLN+MVT
Sbjct: 204 GLFLQKTNIIKDYLEDINERPKSRMFWPREIWGKYVDKLEDFKNEEKATKAVQCLNEMVT 263
Query: 62 NALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAKV 121
NAL HVEDCLK +++LRD AIF+ CAIPQI+AIGTLALCYNN++VFRGVV++RRGL AKV
Sbjct: 264 NALNHVEDCLKSLASLRDPAIFQSCAIPQIVAIGTLALCYNNVQVFRGVVRLRRGLIAKV 323
Query: 122 IDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSYI 180
IDRT M DVY AFYDFS +L+ K++ NDPNA KTL+R+E I+K C ++G L+KRKSY+
Sbjct: 324 IDRTKTMDDVYGAFYDFSCMLQTKVDNNDPNAMKTLNRLETIKKFCKENGGLHKRKSYV 382
>UNIPROTKB|F1NFJ9 [details] [associations]
symbol:FDFT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004310 "farnesyl-diphosphate farnesyltransferase
activity" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0005783
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 GO:GO:0004310 TIGRFAMs:TIGR01559 OMA:ELRHAVC
GeneTree:ENSGT00390000016034 EMBL:AADN02018292 EMBL:AADN02018293
IPI:IPI00570752 Ensembl:ENSGALT00000026894 Uniprot:F1NFJ9
Length = 418
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 91/179 (50%), Positives = 117/179 (65%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED E R FWPRE+WS+Y KL DL EN D AVQC+N+++
Sbjct: 208 MGLFLQKTNIIRDYLEDQLE---GREFWPREVWSRYTKKLSDLTKPENIDMAVQCMNELI 264
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TNAL HV D L Y+S L++ ++F FCAIPQ+MAI TLA CYNN +VFRGVVK+R+G
Sbjct: 265 TNALRHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLAACYNNKQVFRGVVKIRKGQAVT 324
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 179
++ NM V Y + + KI DP++ KT + +I+ + SG + R Y
Sbjct: 325 LMMDATNMQSVKAIMYQYVEEIYQKIPSTDPSSNKTQQIIASIRAMSLPSGPMASRHHY 383
>DICTYBASE|DDB_G0292072 [details] [associations]
symbol:fdfT "farnesyl-diphosphate
farnesyltransferase" species:44689 "Dictyostelium discoideum"
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA;ISS] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity"
evidence=IEA;ISS] [GO:0051996 "squalene synthase activity"
evidence=IEA] [GO:0006695 "cholesterol biosynthetic process"
evidence=IEA;ISS] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016126 "sterol biosynthetic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0008202 "steroid metabolic process" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 dictyBase:DDB_G0292072 GO:GO:0016021
GenomeReviews:CM000155_GR GO:GO:0005789 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AAFI02000187 GO:GO:0016491
GO:GO:0006695 GO:GO:0008299 UniPathway:UPA00767 eggNOG:COG1562
KO:K00801 GO:GO:0004310 GO:GO:0051996 TIGRFAMs:TIGR01559
RefSeq:XP_629811.1 HSSP:P37268 ProteinModelPortal:Q54DR1
STRING:Q54DR1 EnsemblProtists:DDB0231376 GeneID:8628492
KEGG:ddi:DDB_G0292072 OMA:ELRHAVC ProtClustDB:CLSZ2429473
Uniprot:Q54DR1
Length = 416
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 88/171 (51%), Positives = 121/171 (70%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLEDINE K R+FWPR++W++Y LE+ K + A+ CLND++
Sbjct: 207 MGLFLQKTNIIRDYLEDINE--K-RIFWPRDVWARYTLHLENFKEAKYQIPALHCLNDLI 263
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TNAL H L YMS L++ + FCAIPQ+MAIGTL CYNN VF GVVK+R+G A
Sbjct: 264 TNALSHALIALDYMSRLKNPQVINFCAIPQVMAIGTLNACYNNYNVFTGVVKIRKGQRAL 323
Query: 121 VID--RTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMD 169
++D ++ +T Y F+ F+N ++ K+ NDP+A KT+ +E+I+K C++
Sbjct: 324 IVDAIQSKGLTATYELFFKFANEMRHKVPPNDPSAKKTIQHLESIEKLCIE 374
>RGD|61834 [details] [associations]
symbol:Fdft1 "farnesyl diphosphate farnesyl transferase 1"
species:10116 "Rattus norvegicus" [GO:0004310 "farnesyl-diphosphate
farnesyltransferase activity" evidence=IDA;IMP] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=IMP;TAS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0045338 "farnesyl diphosphate metabolic process"
evidence=IMP] [GO:0051996 "squalene synthase activity" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 RGD:61834 GO:GO:0043231
GO:GO:0016021 GO:GO:0005789 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016491 GO:GO:0006695 GO:GO:0045338
GO:GO:0008299 UniPathway:UPA00767 eggNOG:COG1562
HOGENOM:HOG000186940 KO:K00801 GO:GO:0004310 GO:GO:0051996
TIGRFAMs:TIGR01559 HOVERGEN:HBG002370 OrthoDB:EOG4QVCC2 OMA:ELRHAVC
CTD:2222 GeneTree:ENSGT00390000016034 EMBL:M95591 EMBL:BC081810
IPI:IPI00210233 PIR:A45105 RefSeq:NP_062111.1 UniGene:Rn.154404
ProteinModelPortal:Q02769 SMR:Q02769 STRING:Q02769 PRIDE:Q02769
Ensembl:ENSRNOT00000032089 GeneID:29580 KEGG:rno:29580
UCSC:RGD:61834 InParanoid:Q02769 BindingDB:Q02769 ChEMBL:CHEMBL3815
NextBio:609686 Genevestigator:Q02769 GermOnline:ENSRNOG00000021314
Uniprot:Q02769
Length = 416
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 86/179 (48%), Positives = 116/179 (64%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED E R FWP+E+W KYV KLED EN D AV+CLN+++
Sbjct: 207 MGLFLQKTNIIRDYLEDQQE---GRQFWPQEVWGKYVKKLEDFVKPENVDVAVKCLNELI 263
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA CYNN +VF+GVVK+R+G
Sbjct: 264 TNALQHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNHQVFKGVVKIRKGQAVT 323
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 179
++ NM V Y + + ++ +DP+A+K + I+ + + L R Y
Sbjct: 324 LMMDATNMPAVKAIIYQYIEEIYHRVPNSDPSASKAKQLISNIRTQSLPNCQLISRSHY 382
>MGI|MGI:102706 [details] [associations]
symbol:Fdft1 "farnesyl diphosphate farnesyl transferase 1"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004310 "farnesyl-diphosphate farnesyltransferase
activity" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0006695 "cholesterol biosynthetic process" evidence=ISO]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0045338 "farnesyl
diphosphate metabolic process" evidence=ISO] [GO:0051996 "squalene
synthase activity" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
MGI:MGI:102706 GO:GO:0016021 GO:GO:0005789 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016491 GO:GO:0006695
EMBL:CH466535 GO:GO:0045338 GO:GO:0008299 UniPathway:UPA00767
eggNOG:COG1562 HOGENOM:HOG000186940 KO:K00801 GO:GO:0004310
GO:GO:0051996 TIGRFAMs:TIGR01559 HOVERGEN:HBG002370
OrthoDB:EOG4QVCC2 OMA:ELRHAVC CTD:2222 EMBL:D29016 EMBL:AK076062
EMBL:AK146766 EMBL:AK158633 EMBL:AK168629 EMBL:AK169317
EMBL:BC054722 EMBL:BC138301 EMBL:BC138302 IPI:IPI00134836
PIR:S52075 RefSeq:NP_034321.2 UniGene:Mm.474432
ProteinModelPortal:P53798 SMR:P53798 STRING:P53798
PhosphoSite:P53798 PaxDb:P53798 PRIDE:P53798
Ensembl:ENSMUST00000054963 GeneID:14137 KEGG:mmu:14137
GeneTree:ENSGT00390000016034 InParanoid:Q8BPF5 ChEMBL:CHEMBL4778
NextBio:285250 Bgee:P53798 CleanEx:MM_FDFT1 Genevestigator:P53798
GermOnline:ENSMUSG00000021273 Uniprot:P53798
Length = 416
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 86/179 (48%), Positives = 116/179 (64%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED E R FWP+E+W +Y+ KLED EN D AVQCLN+++
Sbjct: 207 MGLFLQKTNIIRDYLEDQQE---GRKFWPQEVWGRYIKKLEDFAKPENVDVAVQCLNELI 263
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TN L H+ D L Y+S LR+ ++F FCAIPQ+MAI TLA CYNN +VF+GVVK+R+G
Sbjct: 264 TNTLQHIPDVLTYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGVVKIRKGQAVT 323
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 179
++ NM V Y + + +I +DP+++KT + I+ + + L R Y
Sbjct: 324 LMMDATNMPAVKAIIYQYIEEIYHRIPNSDPSSSKTKQVISKIRTQNLPNCQLISRSHY 382
>UNIPROTKB|Q32KR6 [details] [associations]
symbol:FDFT1 "Squalene synthase" species:9913 "Bos taurus"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0051996 "squalene synthase activity" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 GO:GO:0016021 GO:GO:0005789 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016491 GO:GO:0006695
GO:GO:0008299 UniPathway:UPA00767 eggNOG:COG1562
HOGENOM:HOG000186940 GO:GO:0004310 GO:GO:0051996 TIGRFAMs:TIGR01559
EMBL:BC109959 IPI:IPI01028010 UniGene:Bt.14255
ProteinModelPortal:Q32KR6 SMR:Q32KR6 STRING:Q32KR6 PRIDE:Q32KR6
HOVERGEN:HBG002370 InParanoid:Q32KR6 OrthoDB:EOG4QVCC2
Uniprot:Q32KR6
Length = 417
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 88/179 (49%), Positives = 114/179 (63%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED E R FWP+E WSKYV KL D EN D AVQCLN+++
Sbjct: 207 MGLFLQKTNIIRDYLEDQRE---GREFWPQETWSKYVKKLGDFAKPENIDLAVQCLNELI 263
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TN L H+ D + Y+S LR+ +IF FCAIPQ+MAI TLA CYNN +VF+GVVK+R+G
Sbjct: 264 TNTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATLAACYNNQQVFKGVVKIRKGQAVT 323
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 179
++ NM V + + + +I +DP +TKT + I+ + + L R Y
Sbjct: 324 LMMDATNMPAVKAIIHQYMEEIYHRIPNSDPCSTKTQQIISTIRTQNLPNCQLVSRSHY 382
>UNIPROTKB|Q6IE76 [details] [associations]
symbol:fdft1 "FDFT1 protein" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008610 "lipid
biosynthetic process" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0005783
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 KO:K00801 GO:GO:0004310 TIGRFAMs:TIGR01559
UniGene:Bt.14255 HOVERGEN:HBG002370 OMA:ELRHAVC CTD:2222
GeneTree:ENSGT00390000016034 EMBL:DAAA02021921 EMBL:BN000317
IPI:IPI00852555 RefSeq:NP_001013022.1 SMR:Q6IE76 STRING:Q6IE76
Ensembl:ENSBTAT00000016504 GeneID:281767 KEGG:bta:281767
InParanoid:Q6IE76 ChEMBL:CHEMBL3605 NextBio:20805683 Uniprot:Q6IE76
Length = 417
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 88/179 (49%), Positives = 114/179 (63%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED E R FWP+E WSKYV KL D EN D AVQCLN+++
Sbjct: 207 MGLFLQKTNIIRDYLEDQRE---GREFWPQETWSKYVKKLGDFAKPENIDLAVQCLNELI 263
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TN L H+ D + Y+S LR+ +IF FCAIPQ+MAI TLA CYNN +VF+GVVK+R+G
Sbjct: 264 TNTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATLAACYNNQQVFKGVVKIRKGQAVT 323
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 179
++ NM V + + + +I +DP +TKT + I+ + + L R Y
Sbjct: 324 LMMDATNMPAVKAIIHQYMEEIYHRIPNSDPCSTKTQQIISTIRTQNLPNCQLVSRSHY 382
>UNIPROTKB|E2R6N6 [details] [associations]
symbol:FDFT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008610 "lipid
biosynthetic process" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0005783
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 KO:K00801 GO:GO:0004310 TIGRFAMs:TIGR01559
OMA:ELRHAVC CTD:2222 GeneTree:ENSGT00390000016034 EMBL:AAEX03014318
RefSeq:XP_534557.2 Ensembl:ENSCAFT00000012705 GeneID:477362
KEGG:cfa:477362 NextBio:20852865 Uniprot:E2R6N6
Length = 417
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 85/179 (47%), Positives = 115/179 (64%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED E R FWP+E+WSKYV KL D +N D AVQCLN+++
Sbjct: 207 MGLFLQKTNIIRDYLEDQRE---GREFWPQEVWSKYVKKLGDFAKPQNIDSAVQCLNELI 263
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TNAL H+ + Y+S LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G+VK+R+G
Sbjct: 264 TNALHHIPHVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGIVKIRKGQAVT 323
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 179
++ NM V Y + + +I +DP++ KT + I+ + + L R Y
Sbjct: 324 LMMDATNMPAVKAIIYQYMEEIYHRIPSSDPSSGKTRQIISTIRTQNLPNCQLISRSHY 382
>UNIPROTKB|B3KQ95 [details] [associations]
symbol:FDFT1 "Squalene synthase" species:9606 "Homo
sapiens" [GO:0008610 "lipid biosynthetic process" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0045338 "farnesyl diphosphate metabolic process"
evidence=IEA] InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 GO:GO:0045338 GO:GO:0004310 TIGRFAMs:TIGR01559
HOVERGEN:HBG002370 UniGene:Hs.593928 HGNC:HGNC:3629 ChiTaRS:FDFT1
EMBL:AC069185 EMBL:AK057726 IPI:IPI00909973 SMR:B3KQ95
STRING:B3KQ95 Ensembl:ENST00000538689 Uniprot:B3KQ95
Length = 306
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 85/179 (47%), Positives = 115/179 (64%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED R FWP+E+WS+YV KL D EN D AVQCLN+++
Sbjct: 96 MGLFLQKTNIIRDYLEDQQG---GREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELI 152
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G
Sbjct: 153 TNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVT 212
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 179
++ NM V Y + + +I +DP+++KT + I+ + + L R Y
Sbjct: 213 LMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHY 271
>UNIPROTKB|B4DJE5 [details] [associations]
symbol:FDFT1 "cDNA FLJ50548, highly similar to Squalene
synthetase (EC 2.5.1.21)" species:9606 "Homo sapiens" [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
GO:GO:0005783 GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0008610 HOGENOM:HOG000186940 GO:GO:0004310
TIGRFAMs:TIGR01559 HOVERGEN:HBG002370 UniGene:Hs.593928
HGNC:HGNC:3629 ChiTaRS:FDFT1 EMBL:AC069185 EMBL:AK296043
IPI:IPI00908715 SMR:B4DJE5 STRING:B4DJE5 Ensembl:ENST00000443614
UCSC:uc011kxf.2 Uniprot:B4DJE5
Length = 374
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 85/179 (47%), Positives = 115/179 (64%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED R FWP+E+WS+YV KL D EN D AVQCLN+++
Sbjct: 164 MGLFLQKTNIIRDYLEDQQG---GREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELI 220
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G
Sbjct: 221 TNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVT 280
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 179
++ NM V Y + + +I +DP+++KT + I+ + + L R Y
Sbjct: 281 LMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHY 339
>UNIPROTKB|B4DT56 [details] [associations]
symbol:FDFT1 "cDNA FLJ50660, highly similar to Squalene
synthetase (EC 2.5.1.21)" species:9606 "Homo sapiens" [GO:0008610
"lipid biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004310 "farnesyl-diphosphate
farnesyltransferase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IEA]
[GO:0045338 "farnesyl diphosphate metabolic process" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0016021
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0008610
GO:GO:0045338 GO:GO:0004310 TIGRFAMs:TIGR01559 HOVERGEN:HBG002370
UniGene:Hs.593928 HGNC:HGNC:3629 ChiTaRS:FDFT1 EMBL:AC069185
EMBL:AK300059 EMBL:AK316534 IPI:IPI01012882 SMR:B4DT56
STRING:B4DT56 Ensembl:ENST00000525777 Ensembl:ENST00000528643
Uniprot:B4DT56
Length = 332
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 85/179 (47%), Positives = 115/179 (64%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED R FWP+E+WS+YV KL D EN D AVQCLN+++
Sbjct: 122 MGLFLQKTNIIRDYLEDQQG---GREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELI 178
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G
Sbjct: 179 TNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVT 238
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 179
++ NM V Y + + +I +DP+++KT + I+ + + L R Y
Sbjct: 239 LMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHY 297
>UNIPROTKB|B7Z1J3 [details] [associations]
symbol:FDFT1 "Squalene synthase" species:9606 "Homo
sapiens" [GO:0008610 "lipid biosynthetic process" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0045338 "farnesyl diphosphate metabolic process"
evidence=IEA] InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 GO:GO:0045338 GO:GO:0004310 TIGRFAMs:TIGR01559
HOVERGEN:HBG002370 UniGene:Hs.593928 HGNC:HGNC:3629 ChiTaRS:FDFT1
EMBL:AC069185 EMBL:AK293545 EMBL:AK315993 EMBL:AK316351
EMBL:AK316531 IPI:IPI01022304 SMR:B7Z1J3 STRING:B7Z1J3
Ensembl:ENST00000528812 Ensembl:ENST00000530664 Uniprot:B7Z1J3
Length = 353
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 85/179 (47%), Positives = 115/179 (64%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED R FWP+E+WS+YV KL D EN D AVQCLN+++
Sbjct: 143 MGLFLQKTNIIRDYLEDQQG---GREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELI 199
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G
Sbjct: 200 TNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVT 259
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 179
++ NM V Y + + +I +DP+++KT + I+ + + L R Y
Sbjct: 260 LMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHY 318
>UNIPROTKB|E9PNM1 [details] [associations]
symbol:FDFT1 "Squalene synthase" species:9606 "Homo
sapiens" [GO:0004310 "farnesyl-diphosphate farnesyltransferase
activity" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0005783
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 GO:GO:0004310 TIGRFAMs:TIGR01559 HGNC:HGNC:3629
ChiTaRS:FDFT1 EMBL:AC069185 IPI:IPI00976521
ProteinModelPortal:E9PNM1 SMR:E9PNM1 Ensembl:ENST00000525900
ArrayExpress:E9PNM1 Bgee:E9PNM1 Uniprot:E9PNM1
Length = 410
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 85/179 (47%), Positives = 115/179 (64%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED R FWP+E+WS+YV KL D EN D AVQCLN+++
Sbjct: 200 MGLFLQKTNIIRDYLEDQQG---GREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELI 256
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G
Sbjct: 257 TNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVT 316
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 179
++ NM V Y + + +I +DP+++KT + I+ + + L R Y
Sbjct: 317 LMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHY 375
>UNIPROTKB|P37268 [details] [associations]
symbol:FDFT1 "Squalene synthase" species:9606 "Homo
sapiens" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051996
"squalene synthase activity" evidence=IEA] [GO:0045338 "farnesyl
diphosphate metabolic process" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=TAS] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=TAS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=TAS]
[GO:0006695 "cholesterol biosynthetic process" evidence=TAS]
[GO:0044255 "cellular lipid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
GO:GO:0016021 GO:GO:0005789 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016491 GO:GO:0044255 GO:GO:0006695
GO:GO:0045338 GO:GO:0008299 UniPathway:UPA00767 eggNOG:COG1562
KO:K00801 GO:GO:0004310 GO:GO:0051996 TIGRFAMs:TIGR01559
HOVERGEN:HBG002370 OrthoDB:EOG4QVCC2 OMA:ELRHAVC EMBL:L06070
EMBL:L06105 EMBL:X69141 EMBL:S76822 EMBL:BC003573 EMBL:BC009251
EMBL:BC029641 IPI:IPI00020944 PIR:A45998 PIR:I38245 PIR:I52090
RefSeq:NP_004453.3 UniGene:Hs.593928 PDB:1EZF PDB:3ASX PDB:3LEE
PDB:3Q2Z PDB:3Q30 PDB:3V66 PDB:3VJ8 PDB:3VJ9 PDB:3VJA PDB:3VJB
PDB:3VJC PDBsum:1EZF PDBsum:3ASX PDBsum:3LEE PDBsum:3Q2Z
PDBsum:3Q30 PDBsum:3V66 PDBsum:3VJ8 PDBsum:3VJ9 PDBsum:3VJA
PDBsum:3VJB PDBsum:3VJC ProteinModelPortal:P37268 SMR:P37268
IntAct:P37268 MINT:MINT-1401726 STRING:P37268 PhosphoSite:P37268
DMDM:585126 PaxDb:P37268 PeptideAtlas:P37268 PRIDE:P37268
DNASU:2222 Ensembl:ENST00000220584 GeneID:2222 KEGG:hsa:2222
UCSC:uc003wuh.3 CTD:2222 GeneCards:GC08P011653 H-InvDB:HIX0168873
HGNC:HGNC:3629 HPA:HPA008874 MIM:184420 neXtProt:NX_P37268
PharmGKB:PA28073 InParanoid:P37268 PhylomeDB:P37268
BioCyc:MetaCyc:HS01329-MONOMER SABIO-RK:P37268 BindingDB:P37268
ChEMBL:CHEMBL3338 ChiTaRS:FDFT1 EvolutionaryTrace:P37268
GenomeRNAi:2222 NextBio:9013 ArrayExpress:P37268 Bgee:P37268
CleanEx:HS_FDFT1 Genevestigator:P37268 GermOnline:ENSG00000079459
Uniprot:P37268
Length = 417
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 85/179 (47%), Positives = 115/179 (64%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED R FWP+E+WS+YV KL D EN D AVQCLN+++
Sbjct: 207 MGLFLQKTNIIRDYLEDQQG---GREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELI 263
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
TNAL H+ D + Y+S LR+ ++F FCAIPQ+MAI TLA CYNN +VF+G VK+R+G
Sbjct: 264 TNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVT 323
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 179
++ NM V Y + + +I +DP+++KT + I+ + + L R Y
Sbjct: 324 LMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHY 382
>UNIPROTKB|I3LFX7 [details] [associations]
symbol:FDFT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008610 "lipid
biosynthetic process" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
InterPro:IPR002060 InterPro:IPR006449 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0005783
GO:GO:0016021 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008610 GO:GO:0004310 TIGRFAMs:TIGR01559 OMA:ELRHAVC
GeneTree:ENSGT00390000016034 EMBL:FP476104
Ensembl:ENSSSCT00000024166 Uniprot:I3LFX7
Length = 417
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 87/179 (48%), Positives = 114/179 (63%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED E R FWP+E+WSKYV KL D EN D AVQCLN++V
Sbjct: 207 MGLFLQKTNIIRDYLEDQQE---GREFWPQEVWSKYVKKLGDFAKPENVDLAVQCLNELV 263
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
T+ L H+ D + Y+S LR+ +IF FCAIPQ+MAI TLA CYNN +VF+GVVK+R+G
Sbjct: 264 TSTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATLAACYNNQQVFKGVVKIRKGQAVT 323
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSY 179
++ NM V + + + +I +DP + KT + I+ + + L R Y
Sbjct: 324 LMMDATNMPAVKAIIHQYMEEIYHRIPDSDPYSAKTRQIISTIRTQNLPNCQLISRSHY 382
>ZFIN|ZDB-GENE-081104-242 [details] [associations]
symbol:si:ch73-107c13.2 "si:ch73-107c13.2"
species:7955 "Danio rerio" [GO:0016740 "transferase activity"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 ZFIN:ZDB-GENE-081104-242 GO:GO:0016021
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0008610
HOGENOM:HOG000186940 KO:K00801 GO:GO:0004310 TIGRFAMs:TIGR01559
HOVERGEN:HBG002370 OrthoDB:EOG4QVCC2 OMA:ELRHAVC
GeneTree:ENSGT00390000016034 EMBL:CU207296 IPI:IPI00507562
RefSeq:NP_001189454.1 UniGene:Dr.20618 Ensembl:ENSDART00000084724
GeneID:571911 KEGG:dre:571911 NextBio:20890752 Uniprot:B8JKU0
Length = 418
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 86/191 (45%), Positives = 125/191 (65%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDYLED + R FWP E WS+Y + LEDL ++ A+ CLN +V
Sbjct: 207 MGLFLQKTNIIRDYLEDQQQ---GRAFWPEEAWSQYASGLEDLAQPQHLSSALSCLNLLV 263
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
T+AL HV D + Y+S LR+ ++F FCAIPQ+MAI TL+ CYNN +VF+GVVK+R+G
Sbjct: 264 TDALRHVPDVMLYLSRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQAVT 323
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKACMDSGVLNKRKSYI 180
++ + NM+ VY +S+ + K++ +DP+ KTL + I++ + G ++ R +
Sbjct: 324 LMMQATNMSAVYSIITQYSHEILQKVSISDPSREKTLQILSVIREKSVHEGCVSSRAHHH 383
Query: 181 IQSELRYSSTM 191
I S + S+ M
Sbjct: 384 I-SPVCVSAAM 393
>CGD|CAL0000316 [details] [associations]
symbol:ERG9 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0006696 "ergosterol
biosynthetic process" evidence=ISS] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0051996 "squalene
synthase activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
CGD:CAL0000316 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0006696
EMBL:AACQ01000103 EMBL:AACQ01000102 KO:K00801 GO:GO:0004310
TIGRFAMs:TIGR01559 RefSeq:XP_714460.1 RefSeq:XP_714509.1
ProteinModelPortal:Q59Y33 STRING:Q59Y33 GeneID:3643854
GeneID:3643913 KEGG:cal:CaO19.11099 KEGG:cal:CaO19.3616
Uniprot:Q59Y33
Length = 448
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 78/170 (45%), Positives = 106/170 (62%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK---AVQCLN 57
MGLFLQKTNIIRDY ED+ + R FWPREIWSKY L+D + K V C+N
Sbjct: 215 MGLFLQKTNIIRDYHEDLQD---GRSFWPREIWSKYTENLQDFHKVKTPAKEFAGVSCIN 271
Query: 58 DMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGL 117
++V NAL HV DCL Y+S ++D + F FCAIPQ+MA+ TLA YNN +V GVVK+R+G
Sbjct: 272 ELVLNALGHVTDCLDYLSLVKDPSSFSFCAIPQVMAVATLAEVYNNPKVLHGVVKIRKGT 331
Query: 118 TAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 167
T ++I + + V F ++ ++ K + DPN K + I++ C
Sbjct: 332 TCRLILESRTLPGVVKIFKEYIQVINHKSSVRDPNYLKIGIKCGEIEQYC 381
>UNIPROTKB|Q59Y33 [details] [associations]
symbol:ERG9 "Putative uncharacterized protein ERG9"
species:237561 "Candida albicans SC5314" [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=ISS]
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006696 "ergosterol
biosynthetic process" evidence=ISS] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 CGD:CAL0000316 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0006696 EMBL:AACQ01000103 EMBL:AACQ01000102 KO:K00801
GO:GO:0004310 TIGRFAMs:TIGR01559 RefSeq:XP_714460.1
RefSeq:XP_714509.1 ProteinModelPortal:Q59Y33 STRING:Q59Y33
GeneID:3643854 GeneID:3643913 KEGG:cal:CaO19.11099
KEGG:cal:CaO19.3616 Uniprot:Q59Y33
Length = 448
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 78/170 (45%), Positives = 106/170 (62%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDK---AVQCLN 57
MGLFLQKTNIIRDY ED+ + R FWPREIWSKY L+D + K V C+N
Sbjct: 215 MGLFLQKTNIIRDYHEDLQD---GRSFWPREIWSKYTENLQDFHKVKTPAKEFAGVSCIN 271
Query: 58 DMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGL 117
++V NAL HV DCL Y+S ++D + F FCAIPQ+MA+ TLA YNN +V GVVK+R+G
Sbjct: 272 ELVLNALGHVTDCLDYLSLVKDPSSFSFCAIPQVMAVATLAEVYNNPKVLHGVVKIRKGT 331
Query: 118 TAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQKAC 167
T ++I + + V F ++ ++ K + DPN K + I++ C
Sbjct: 332 TCRLILESRTLPGVVKIFKEYIQVINHKSSVRDPNYLKIGIKCGEIEQYC 381
>POMBASE|SPBC646.05c [details] [associations]
symbol:erg9 "squalene synthase Erg9 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IGI;IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0006696 "ergosterol
biosynthetic process" evidence=IGI] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0042175 "nuclear outer membrane-endoplasmic
reticulum membrane network" evidence=IDA] [GO:0051996 "squalene
synthase activity" evidence=IEA] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 PomBase:SPBC646.05c GO:GO:0016021 GO:GO:0005789
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CU329671
GO:GO:0016491 GenomeReviews:CU329671_GR GO:GO:0006696 GO:GO:0008299
UniPathway:UPA00767 eggNOG:COG1562 HOGENOM:HOG000186940 KO:K00801
GO:GO:0004310 GO:GO:0051996 TIGRFAMs:TIGR01559 OMA:ELRHAVC
EMBL:L06071 PIR:B48057 PIR:T40581 RefSeq:NP_595363.1
ProteinModelPortal:P36596 IntAct:P36596 MINT:MINT-3377067
STRING:P36596 EnsemblFungi:SPBC646.05c.1 GeneID:2541110
KEGG:spo:SPBC646.05c OrthoDB:EOG4BP4MQ NextBio:20802223
Uniprot:P36596
Length = 460
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 74/155 (47%), Positives = 99/155 (63%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
+GLFLQK NIIRDY ED ++ R FWPREIWSKY + DL +NS+KA++CL+DM
Sbjct: 211 LGLFLQKVNIIRDYREDFDDN---RHFWPREIWSKYTSSFGDLCLPDNSEKALECLSDMT 267
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
NAL H D L Y+S L+ IF FCAIPQ+MAI TLA + N +VF+ VK+R+G +
Sbjct: 268 ANALTHATDALVYLSQLKTQEIFNFCAIPQVMAIATLAAVFRNPDVFQTNVKIRKGQAVQ 327
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 155
+I + N+ +V F ++ + K DPN K
Sbjct: 328 IILHSVNLKNVCDLFLRYTRDIHYKNTPKDPNFLK 362
>SGD|S000001233 [details] [associations]
symbol:ERG9 "Farnesyl-diphosphate farnesyl transferase
(squalene synthase)" species:4932 "Saccharomyces cerevisiae"
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] [GO:0006696 "ergosterol
biosynthetic process" evidence=IMP] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0051996 "squalene synthase activity"
evidence=IEA;IDA] [GO:0016021 "integral to membrane"
evidence=IEA;IDA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IDA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity"
evidence=IEA;IDA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0008202 "steroid metabolic process"
evidence=IEA] InterPro:IPR002060 InterPro:IPR006449
InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045
SGD:S000001233 GO:GO:0005783 GO:GO:0016021 GO:GO:0005741
GO:GO:0005789 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
EMBL:BK006934 GO:GO:0016491 EMBL:U00030 GO:GO:0006696 GO:GO:0008299
UniPathway:UPA00767 eggNOG:COG1562 HOGENOM:HOG000186940 KO:K00801
GO:GO:0004310 GO:GO:0051996 TIGRFAMs:TIGR01559 OMA:ELRHAVC
GeneTree:ENSGT00390000016034 OrthoDB:EOG4BP4MQ EMBL:M63979
EMBL:X59959 PIR:S46682 RefSeq:NP_012060.1 ProteinModelPortal:P29704
SMR:P29704 DIP:DIP-4576N IntAct:P29704 MINT:MINT-491875
STRING:P29704 PaxDb:P29704 PeptideAtlas:P29704 EnsemblFungi:YHR190W
GeneID:856597 KEGG:sce:YHR190W CYGD:YHR190w
BioCyc:MetaCyc:YHR190W-MONOMER NextBio:982487 ArrayExpress:P29704
Genevestigator:P29704 GermOnline:YHR190W Uniprot:P29704
Length = 444
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 73/165 (44%), Positives = 103/165 (62%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRDY ED+ + R FWP+EIWS+Y +L+D EN + C+N +V
Sbjct: 214 MGLFLQKTNIIRDYNEDLVD---GRSFWPKEIWSQYAPQLKDFMKPENEQLGLDCINHLV 270
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
NAL HV D L Y++ + + + F+FCAIPQ+MAI TLAL +NN EV G VK+R+G T
Sbjct: 271 LNALSHVIDVLTYLAGIHEQSTFQFCAIPQVMAIATLALVFNNREVLHGNVKIRKGTTCY 330
Query: 121 VIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRVEAIQK 165
+I ++ + F + +K K+ DPN K ++ I++
Sbjct: 331 LILKSRTLRGCVEIFDYYLRDIKSKLAVQDPNFLKLNIQISKIEQ 375
>ASPGD|ASPL0000036668 [details] [associations]
symbol:AN10396 species:162425 "Emericella nidulans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=IEA]
[GO:0051996 "squalene synthase activity" evidence=IEA] [GO:0006696
"ergosterol biosynthetic process" evidence=IEA] InterPro:IPR002060
InterPro:IPR006449 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 GO:GO:0016021 GO:GO:0005741 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:BN001306 GO:GO:0008610
GO:GO:0004310 TIGRFAMs:TIGR01559 ProteinModelPortal:C8VHP8
EnsemblFungi:CADANIAT00009666 OMA:FNFVAIP Uniprot:C8VHP8
Length = 470
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 71/156 (45%), Positives = 98/156 (62%)
Query: 1 MGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMV 60
MGLFLQKTNIIRD ED ++ R FWP+ IWSK+V+ EDL EN + A+ C ++MV
Sbjct: 216 MGLFLQKTNIIRDIREDEDD---GRRFWPKSIWSKHVDNFEDLFKPENREAALNCNSEMV 272
Query: 61 TNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGLTAK 120
NAL HVEDCL Y++ LR+ ++F FCAIPQ MAI TL LC+ N +F +K+ +G +
Sbjct: 273 LNALEHVEDCLFYLAGLREQSVFNFCAIPQAMAIATLELCFRNYTMFERNIKITKGDACQ 332
Query: 121 VI-DRTNNMTDVYLAFYDFSNILKPKINKNDPNATK 155
++ + T N+ + F + + K DPN K
Sbjct: 333 LMTESTQNLRVLCDVFRRYVRRIHKKNTPKDPNFLK 368
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.134 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 213 201 0.00089 111 3 11 22 0.43 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 594 (63 KB)
Total size of DFA: 168 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.66u 0.19s 18.85t Elapsed: 00:00:01
Total cpu time: 18.66u 0.19s 18.85t Elapsed: 00:00:01
Start: Fri May 10 04:13:00 2013 End: Fri May 10 04:13:01 2013