Query 028140
Match_columns 213
No_of_seqs 217 out of 1788
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 06:51:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028140.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028140hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0224 Aquaporin (major intri 100.0 1.3E-34 2.9E-39 243.5 7.8 161 49-212 28-202 (316)
2 COG0580 GlpF Glycerol uptake f 100.0 5.8E-33 1.3E-37 230.6 13.6 159 51-211 3-168 (241)
3 KOG0223 Aquaporin (major intri 100.0 1.2E-32 2.7E-37 229.0 13.9 155 46-204 4-159 (238)
4 PF00230 MIP: Major intrinsic 100.0 2.7E-31 5.9E-36 221.1 17.0 162 46-208 1-165 (227)
5 PTZ00016 aquaglyceroporin; Pro 100.0 4.5E-31 9.8E-36 227.2 18.1 160 49-212 46-218 (294)
6 PLN00184 aquaporin NIP1; Provi 100.0 3.8E-30 8.1E-35 221.2 19.0 151 49-203 50-203 (296)
7 PLN00167 aquaporin TIP5; Provi 100.0 5.5E-29 1.2E-33 210.4 18.0 159 48-211 17-177 (256)
8 PLN00182 putative aquaporin NI 100.0 1.1E-28 2.3E-33 211.0 17.5 147 49-203 38-184 (283)
9 PLN00026 aquaporin NIP; Provi 100.0 7E-29 1.5E-33 213.0 16.1 146 49-203 67-212 (298)
10 PRK05420 aquaporin Z; Provisio 100.0 1.6E-28 3.4E-33 205.1 17.2 149 53-203 2-157 (231)
11 PLN00166 aquaporin TIP2; Provi 100.0 6.6E-28 1.4E-32 203.3 17.4 151 48-203 13-165 (250)
12 PLN00027 aquaporin TIP; Provis 100.0 5.2E-28 1.1E-32 204.4 16.5 150 49-203 16-168 (252)
13 PLN00183 putative aquaporin NI 100.0 2.6E-27 5.7E-32 201.7 17.2 146 49-203 41-186 (274)
14 cd00333 MIP Major intrinsic pr 100.0 2.4E-27 5.3E-32 197.7 14.6 148 54-204 1-156 (228)
15 TIGR00861 MIP MIP family chann 99.9 1.5E-26 3.3E-31 191.5 15.3 146 58-204 1-148 (216)
16 PLN00182 putative aquaporin NI 99.9 4.1E-22 8.8E-27 170.5 12.2 133 14-157 122-254 (283)
17 PLN00026 aquaporin NIP; Provi 99.9 1.1E-21 2.4E-26 168.7 10.6 133 14-158 151-283 (298)
18 cd00333 MIP Major intrinsic pr 99.9 2.5E-21 5.5E-26 161.5 9.8 136 13-154 80-227 (228)
19 KOG0223 Aquaporin (major intri 99.8 9.3E-22 2E-26 163.9 6.7 143 7-159 84-228 (238)
20 PLN00183 putative aquaporin NI 99.8 6.6E-21 1.4E-25 162.5 11.3 135 13-159 124-258 (274)
21 TIGR00861 MIP MIP family chann 99.8 2.2E-20 4.8E-25 154.6 10.6 133 13-151 80-215 (216)
22 PLN00184 aquaporin NIP1; Provi 99.8 8.5E-20 1.8E-24 157.1 11.9 138 13-159 133-275 (296)
23 PLN00166 aquaporin TIP2; Provi 99.8 1E-18 2.2E-23 147.5 13.1 134 14-156 103-236 (250)
24 PRK05420 aquaporin Z; Provisio 99.8 1.3E-18 2.8E-23 145.4 11.3 135 13-156 82-227 (231)
25 PLN00027 aquaporin TIP; Provis 99.8 2.8E-18 6E-23 145.1 13.3 136 13-157 104-239 (252)
26 PTZ00016 aquaglyceroporin; Pro 99.8 5.3E-18 1.1E-22 146.2 10.6 140 13-159 129-292 (294)
27 PLN00167 aquaporin TIP5; Provi 99.7 8.7E-18 1.9E-22 142.2 11.1 139 12-160 105-243 (256)
28 PF00230 MIP: Major intrinsic 99.7 9.6E-18 2.1E-22 139.6 10.5 132 14-152 94-227 (227)
29 COG0580 GlpF Glycerol uptake f 99.7 3.9E-17 8.4E-22 136.1 11.2 135 14-156 88-239 (241)
30 KOG0224 Aquaporin (major intri 99.2 2.6E-11 5.6E-16 103.0 5.7 137 14-157 113-275 (316)
31 PRK10805 formate transporter; 80.7 37 0.00079 29.4 11.8 100 92-198 71-182 (285)
32 COG2116 FocA Formate/nitrite f 67.0 82 0.0018 27.0 15.0 143 50-198 29-179 (265)
33 PF01226 Form_Nir_trans: Forma 66.2 80 0.0017 26.6 13.8 108 90-199 58-172 (250)
34 TIGR00790 fnt formate/nitrite 49.7 1.5E+02 0.0033 24.7 10.9 75 123-197 75-157 (239)
35 PRK12446 undecaprenyldiphospho 46.6 6.1 0.00013 34.9 -0.2 22 106-127 6-27 (352)
36 PF03033 Glyco_transf_28: Glyc 43.1 5 0.00011 29.7 -1.1 19 110-128 7-25 (139)
37 KOG3415 Putative Rab5-interact 42.2 12 0.00025 27.9 0.8 24 5-28 36-59 (129)
38 PRK09713 focB putative formate 39.1 2.5E+02 0.0055 24.2 13.7 101 92-198 70-181 (282)
39 PRK09979 putative rho operon l 21.2 42 0.00091 18.6 0.5 16 108-123 4-19 (33)
40 PF14034 Spore_YtrH: Sporulati 20.2 2.5E+02 0.0055 20.5 4.5 45 112-156 53-99 (102)
No 1
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-34 Score=243.46 Aligned_cols=161 Identities=28% Similarity=0.447 Sum_probs=139.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhcc
Q 028140 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (213)
Q Consensus 49 ~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~ 128 (213)
.+++.|++++||+||++|++++++++++...++.. ...+..+.++||+.+++.+|+.+++||||+|||||+++++.|+
T Consensus 28 ~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~--~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~ 105 (316)
T KOG0224|consen 28 RNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGT--GGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR 105 (316)
T ss_pred HHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCC--CCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC
Confidence 34789999999999999999999988877665432 3345677889999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhccccccccCCCc--------------ccccCCCChhHHHHHHHHHHHHHHHH
Q 028140 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGA--------------NVVAHGYTKGDGLGAEIIGTFVLVYT 194 (213)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~E~i~T~~L~~~ 194 (213)
++|.|.++|+++|++||++|++.+|.+| .+.++.+.++. +.+.|..+.+++|+.|+++|.+|+.+
T Consensus 106 ~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y-~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~ 184 (316)
T KOG0224|consen 106 LPWKKFPVYVLAQFIGAFLGAATVYGLY-YDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLC 184 (316)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999 66655544332 23456789999999999999999999
Q ss_pred HHHHccCCCCCCCCCCCC
Q 028140 195 VFSATDAKRSARDSHVPV 212 (213)
Q Consensus 195 il~~~d~~~~~~~~~~p~ 212 (213)
+++++|+||+.+.+..|+
T Consensus 185 l~aI~D~rN~~p~g~~p~ 202 (316)
T KOG0224|consen 185 LFAITDKRNPIPTGLHPL 202 (316)
T ss_pred eeEEecCCCCCCcchhHH
Confidence 999999999877777665
No 2
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.8e-33 Score=230.57 Aligned_cols=159 Identities=33% Similarity=0.528 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCc
Q 028140 51 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLS 130 (213)
Q Consensus 51 ~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~ 130 (213)
+..|++++||+||++|++++++++......+.+....++..++++||+.+++.+|+++++||+|+|||||+++++.++++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 35688899999999999999999888776665556777888999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhccccccccC------CCcccccCC-CChhHHHHHHHHHHHHHHHHHHHHccCCC
Q 028140 131 LTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLA------GGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKR 203 (213)
Q Consensus 131 ~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~E~i~T~~L~~~il~~~d~~~ 203 (213)
|++.+.||++|++|+++|+.+++.++ ++.+...+ .+.....|+ .+..++|+.|+++||+|+++|++++|++|
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~-~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~ 161 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLY-YGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGN 161 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 99999999999999999999999999 44433322 233334443 47899999999999999999999987665
Q ss_pred CCCCCCCC
Q 028140 204 SARDSHVP 211 (213)
Q Consensus 204 ~~~~~~~p 211 (213)
. ..+..|
T Consensus 162 ~-~~~~ap 168 (241)
T COG0580 162 A-NAGFAP 168 (241)
T ss_pred c-cccchH
Confidence 5 333555
No 3
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-32 Score=229.03 Aligned_cols=155 Identities=53% Similarity=0.735 Sum_probs=136.4
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHh
Q 028140 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (213)
Q Consensus 46 ~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~ 125 (213)
+..+++.+|++++||++|++++|++|+++..... .....+.+.+++++|+.+++.+++++++||||+|||||+++++
T Consensus 4 ~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~---~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~ 80 (238)
T KOG0223|consen 4 ELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPK---YGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAV 80 (238)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---cCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHH
Confidence 4456789999999999999999999998876553 2334567889999999999999999999999999999999999
Q ss_pred hccCcchhHHHHHHHHHHHHHHHHHHHHHHhccccccccCCCcccccCCCChhHHHHHHHHHHHHHHHHHHH-HccCCCC
Q 028140 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRS 204 (213)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~L~~~il~-~~d~~~~ 204 (213)
.+++++.+++.||++|++|+++|+.+++.+. +..+...+.+.+.+.++.+.+|+++.|++.||.|++++++ .+|+||+
T Consensus 81 ~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~ 159 (238)
T KOG0223|consen 81 GGKISLFRAVAYIVAQLLGAIAGAALLKVVT-PGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS 159 (238)
T ss_pred hCCCcHHHhHHHHHHHHHHHHHHHHHHheec-CcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc
Confidence 9999999999999999999999999999999 4433333445567788999999999999999999999999 8888876
No 4
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.98 E-value=2.7e-31 Score=221.07 Aligned_cols=162 Identities=35% Similarity=0.479 Sum_probs=134.8
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCC---CCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHH
Q 028140 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK---CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLG 122 (213)
Q Consensus 46 ~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla 122 (213)
|.++++++|++++||+||++++|+++++.........+ ....++..+++++|+.+++.+++++++||+|+|||||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 34678899999999999999999999866643332221 112356778999999999999999999999999999999
Q ss_pred HHhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhccccccccCCCcccccCCCChhHHHHHHHHHHHHHHHHHHHHccCC
Q 028140 123 LFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 202 (213)
Q Consensus 123 ~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~L~~~il~~~d~~ 202 (213)
.++.|+++|.+.+.|+++|++|+++|+.+++.++ ++.....+...+.+.++.+..++|+.|+++|++|+++++...|+|
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~ 159 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALY-PDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDK 159 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHS-THHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhcc-cCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhcccc
Confidence 9999999999999999999999999999999999 443223333455667888999999999999999999999999998
Q ss_pred CCCCCC
Q 028140 203 RSARDS 208 (213)
Q Consensus 203 ~~~~~~ 208 (213)
|+.+.+
T Consensus 160 ~~~~~~ 165 (227)
T PF00230_consen 160 RKFPLG 165 (227)
T ss_dssp SSSTSS
T ss_pred cccccc
Confidence 877643
No 5
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.97 E-value=4.5e-31 Score=227.17 Aligned_cols=160 Identities=28% Similarity=0.336 Sum_probs=130.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhcc
Q 028140 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (213)
Q Consensus 49 ~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~ 128 (213)
.++++|++++||+||++|+|++++++......+ ...+.+.+++++|+.+++.+++++++||+|+|||||+++++.++
T Consensus 46 ~~~~~~~~laEfigT~llvf~g~g~~~~~~~~~---~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~ 122 (294)
T PTZ00016 46 YRPNVREYVAEFLGTFVLLFFGEGVVATTHTVG---NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGK 122 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC---CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhcc
Confidence 367889999999999999999998776432211 12345678899999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhccccccccCC-------------CcccccCCCChhHHHHHHHHHHHHHHHHH
Q 028140 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAG-------------GANVVAHGYTKGDGLGAEIIGTFVLVYTV 195 (213)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~E~i~T~~L~~~i 195 (213)
++|.+.+.||++|++|+++|++++|.++ ++.++..+. +.....|+.+..++|+.|+++||+|++++
T Consensus 123 i~~~~~~~YiiaQ~lGa~~ga~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~i 201 (294)
T PTZ00016 123 FPWKKLPGYFVAQLLGAFVGAACVYGLY-YGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVI 201 (294)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 443322211 11223456788999999999999999999
Q ss_pred HHHccCCCCCCCCCCCC
Q 028140 196 FSATDAKRSARDSHVPV 212 (213)
Q Consensus 196 l~~~d~~~~~~~~~~p~ 212 (213)
++++|+||+...+..|+
T Consensus 202 la~~d~~~~~~~~~~pl 218 (294)
T PTZ00016 202 LAITDPNNCPAFNYLPV 218 (294)
T ss_pred HHhccCccCCCcCcccH
Confidence 99999887655555554
No 6
>PLN00184 aquaporin NIP1; Provisional
Probab=99.97 E-value=3.8e-30 Score=221.15 Aligned_cols=151 Identities=26% Similarity=0.398 Sum_probs=122.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhcc
Q 028140 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (213)
Q Consensus 49 ~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~ 128 (213)
.++++|++++||+||++|+|++++++...... ....+++.++++||+.+++.+++++++||+|+|||||+++++.++
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~---~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~ 126 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQN---DNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGR 126 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccC---CCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCC
Confidence 45788999999999999999999876543221 112356778999999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhccccccccCCC---cccccCCCChhHHHHHHHHHHHHHHHHHHHHccCCC
Q 028140 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG---ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 203 (213)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~E~i~T~~L~~~il~~~d~~~ 203 (213)
++|.+.++||++|++|+++|+++++.+++... ...... .....|..+..++|+.|+++||+|+++++++.++++
T Consensus 127 ~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~-~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~ 203 (296)
T PLN00184 127 FPLKQVPAYVISQVIGSTLAAATLRLLFGLDH-DVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNR 203 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-hccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCc
Confidence 99999999999999999999999999984322 111111 111234458899999999999999999999866544
No 7
>PLN00167 aquaporin TIP5; Provisional
Probab=99.96 E-value=5.5e-29 Score=210.44 Aligned_cols=159 Identities=30% Similarity=0.386 Sum_probs=128.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--cCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHh
Q 028140 48 KSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (213)
Q Consensus 48 ~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~ 125 (213)
..++++|++++||++|++|+|++++++..... .+......+++.+++++|+.+++.+++++++||+|+|||||+++++
T Consensus 17 ~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~ 96 (256)
T PLN00167 17 VTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAV 96 (256)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHH
Confidence 35678999999999999999999988764321 1111123356788999999999999999999999999999999999
Q ss_pred hccCcchhHHHHHHHHHHHHHHHHHHHHHHhccccccccCCCcccccCCCChhHHHHHHHHHHHHHHHHHHHHccCCCCC
Q 028140 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (213)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~L~~~il~~~d~~~~~ 205 (213)
.++++|.++++||++|++|+++|+.+++.+++..... .....++.+..++++.|+++|++|++++++++|+|+..
T Consensus 97 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~-----~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~ 171 (256)
T PLN00167 97 GGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVP-----TYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGL 171 (256)
T ss_pred hCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcccccc-----ccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence 9999999999999999999999999999887322211 11223455778999999999999999999999887654
Q ss_pred CCCCCC
Q 028140 206 RDSHVP 211 (213)
Q Consensus 206 ~~~~~p 211 (213)
.++..|
T Consensus 172 ~~~~~p 177 (256)
T PLN00167 172 LGAIGP 177 (256)
T ss_pred CCCcch
Confidence 444444
No 8
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.96 E-value=1.1e-28 Score=210.95 Aligned_cols=147 Identities=24% Similarity=0.371 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhcc
Q 028140 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (213)
Q Consensus 49 ~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~ 128 (213)
.++++|++++|++||++|+|++++++....... ...+.+.+++++|+.+++.+++++++||+|+|||||+++++.++
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~---~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~ 114 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYG---GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRR 114 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC---CCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcC
Confidence 457889999999999999999998776432211 12345678899999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhccccccccCCCcccccCCCChhHHHHHHHHHHHHHHHHHHHHccCCC
Q 028140 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 203 (213)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~L~~~il~~~d~~~ 203 (213)
++|.++++||++|++|+++|+++++.+++ .. ..+.....|+.+.+++++.|+++|++|+++++++.++++
T Consensus 115 ~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~-~~----~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~ 184 (283)
T PLN00182 115 FPWYQVPLYIGAQLTGSLLASLTLRLMFN-VT----PEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSR 184 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhc-cc----ccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccc
Confidence 99999999999999999999999999883 21 112222345568899999999999999999998755443
No 9
>PLN00026 aquaporin NIP; Provisional
Probab=99.96 E-value=7e-29 Score=213.05 Aligned_cols=146 Identities=25% Similarity=0.396 Sum_probs=120.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhcc
Q 028140 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (213)
Q Consensus 49 ~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~ 128 (213)
..+++|++++||+||++|+|++++........ + ...+++.+++++|+.+++.+++++++||+|+|||||+++++.++
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~--~-~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~ 143 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKY--D-GAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRH 143 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhcccc--C-CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCC
Confidence 45688999999999999999998754432111 1 11246667899999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhccccccccCCCcccccCCCChhHHHHHHHHHHHHHHHHHHHHccCCC
Q 028140 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 203 (213)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~L~~~il~~~d~~~ 203 (213)
++|.+.|+||++|++|+++|+++++.++++ .. ..+. ..|+.+..++++.|+++||+|+++++++.++++
T Consensus 144 ~~~~~~~~YiiaQilGAi~aa~~~~~~~~~-~~---~~g~--t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~ 212 (298)
T PLN00026 144 FPWKHVPAYIAAQVSASICASFALKGVFHP-FM---SGGV--TVPSVSTGQAFALEFIITFNLLFVVTAVATDTR 212 (298)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cc---cCce--eeecccHHHHHHHHHHHHHHHHHhheeeecCCC
Confidence 999999999999999999999999999833 21 1222 235678899999999999999999998754443
No 10
>PRK05420 aquaporin Z; Provisional
Probab=99.96 E-value=1.6e-28 Score=205.07 Aligned_cols=149 Identities=26% Similarity=0.434 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcch
Q 028140 53 YRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLT 132 (213)
Q Consensus 53 ~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~ 132 (213)
+|++++||++|++|+|++++++......+ ..+.+.+.+++++|+.+++.+++++++||+|+|||||+++++.++++|.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~--~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~ 79 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFP--ELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAK 79 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccC--CCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHH
Confidence 68999999999999999998764322111 1223456789999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccc-ccccC-----CCccc-ccCCCChhHHHHHHHHHHHHHHHHHHHHccCCC
Q 028140 133 RALFYMVMQCLGAICGAGVVKGFMGAGQ-YGRLA-----GGANV-VAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 203 (213)
Q Consensus 133 ~~~~yi~aQ~lGa~~ga~~~~~~~~~~~-~~~~~-----~~~~~-~~~~~~~~~~~~~E~i~T~~L~~~il~~~d~~~ 203 (213)
+.+.||++|++|+++|+.+++.+++++. ++..+ .+... .....+..++++.|+++|++|+++++..+|+|+
T Consensus 80 ~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~ 157 (231)
T PRK05420 80 ELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATDKRA 157 (231)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999998884321 11110 01011 112357889999999999999999999998765
No 11
>PLN00166 aquaporin TIP2; Provisional
Probab=99.96 E-value=6.6e-28 Score=203.29 Aligned_cols=151 Identities=34% Similarity=0.518 Sum_probs=123.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cCC-CCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHh
Q 028140 48 KSWSFYRAGIAEFIATFLFLYISVLTVMGVVK-SNT-KCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (213)
Q Consensus 48 ~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~-~~~-~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~ 125 (213)
..++.+|++++|+++|++|+|++++++..... .+. .....+++.+++++|+.+++.+++++++||+|+|||||+++++
T Consensus 13 ~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l 92 (250)
T PLN00166 13 FSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAI 92 (250)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 34678899999999999999999988764211 111 1112345678999999999999999999999999999999999
Q ss_pred hccCcchhHHHHHHHHHHHHHHHHHHHHHHhccccccccCCCcccccCCCChhHHHHHHHHHHHHHHHHHHHHccCCC
Q 028140 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 203 (213)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~L~~~il~~~d~~~ 203 (213)
.++++|.+.|+||++|++|+++|+.+++.+++.+.. ......++.+..++++.|+++||+|+++++.+.+++|
T Consensus 93 ~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~ 165 (250)
T PLN00166 93 GGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESV-----PTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPK 165 (250)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC-----cccccCCCCcHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999988733211 1122345678899999999999999999999866554
No 12
>PLN00027 aquaporin TIP; Provisional
Probab=99.96 E-value=5.2e-28 Score=204.36 Aligned_cols=150 Identities=33% Similarity=0.494 Sum_probs=122.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--cCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhh
Q 028140 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLA 126 (213)
Q Consensus 49 ~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~ 126 (213)
.+..+|++++|+++|++|+|++++++..... .+.+....+.+.+++++|+.+++.+++++++||+|+|||||+++++.
T Consensus 16 ~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~ 95 (252)
T PLN00027 16 HPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIG 95 (252)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHh
Confidence 4678999999999999999999988654221 11111123456789999999999999999999999999999999999
Q ss_pred ccCcchhHHHHHHHHHHHHHHHHHHHHHHhccccccccCCCcccccCCCChhHHHHHHHHHHHHHHHHHHHHc-cCCC
Q 028140 127 RKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSAT-DAKR 203 (213)
Q Consensus 127 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~L~~~il~~~-d~~~ 203 (213)
++++|.+.|+||++|++|+++|+.+++.+.+... .+.....++.+..++++.|+++||+|+++++.+. |+|+
T Consensus 96 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~ 168 (252)
T PLN00027 96 GNITLLRGILYWIAQLLGSVVACLLLKFSTGGLE-----TSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKK 168 (252)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-----cccccCCCCccHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9999999999999999999999999988763211 1223345678899999999999999999999874 5554
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.95 E-value=2.6e-27 Score=201.66 Aligned_cols=146 Identities=21% Similarity=0.322 Sum_probs=120.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhcc
Q 028140 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (213)
Q Consensus 49 ~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~ 128 (213)
+.+.+|++++|+++|++++|++++++...... ....+...+++++|+.+++.+++++++||+|+|||||+++++.++
T Consensus 41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~~~---~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~ 117 (274)
T PLN00183 41 DLNPARMVLAEMVGTFILMFCVCGIIASTQLS---GGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGH 117 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccc---CCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcC
Confidence 35678999999999999999999876543221 112345667899999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhccccccccCCCcccccCCCChhHHHHHHHHHHHHHHHHHHHHccCCC
Q 028140 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 203 (213)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~L~~~il~~~d~~~ 203 (213)
++|.++|+||++|++|+++|+.+++.+++... +.....|..+..++++.|+++|++|++.++.+.++++
T Consensus 118 i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~------~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~ 186 (274)
T PLN00183 118 FPWSKVPLYITAQTVGSVLATYVGVSVYGVKA------DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQ 186 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------ccccCCCcccHHHHHHHHHHHHHHHHHhhheeecccc
Confidence 99999999999999999999999999884311 1122234556789999999999999999999887654
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.95 E-value=2.4e-27 Score=197.73 Aligned_cols=148 Identities=41% Similarity=0.676 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcchh
Q 028140 54 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTR 133 (213)
Q Consensus 54 ~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~~ 133 (213)
|++++|+++|++++++++++.......++ ...++..+++++|+.+.+.+++++++||+|+|||+|+++++.++++|.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~--~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~ 78 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGG--ASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIR 78 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCC--CCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHH
Confidence 56889999999999999988765443221 1234567799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccCCCc--------ccccCCCChhHHHHHHHHHHHHHHHHHHHHccCCCC
Q 028140 134 ALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGA--------NVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 204 (213)
Q Consensus 134 ~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~E~i~T~~L~~~il~~~d~~~~ 204 (213)
.++||++|++|+++|+.+++.++ ++.++...... +.+.++.+..++++.|+++|++|+++++.+.++++.
T Consensus 79 ~~~y~~aq~~Ga~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~ 156 (228)
T cd00333 79 VIPYIIAQLLGAILGAALLYGLY-YGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNG 156 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-HHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 99999999999999999999998 44433222111 234566788999999999999999999999887654
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.94 E-value=1.5e-26 Score=191.49 Aligned_cols=146 Identities=38% Similarity=0.642 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCC-CC-CccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcchhHH
Q 028140 58 AEFIATFLFLYISVLTVMGVVKSNT-KC-STVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRAL 135 (213)
Q Consensus 58 ~E~igT~~lv~~~~~~~~~~~~~~~-~~-~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~~~~ 135 (213)
+||++|++++|++++++......+. +. ...+...+++.+|+.++..+++++++||+|+|||||+++++.++++|.+.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 5999999999999988765332211 11 111466789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccCCCcccccCCCChhHHHHHHHHHHHHHHHHHHHHccCCCC
Q 028140 136 FYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 204 (213)
Q Consensus 136 ~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~L~~~il~~~d~~~~ 204 (213)
+||++|++|+++|+.+++.++ ++.++..........++.+..++++.|+++|++|+++++...+++++
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~ 148 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLT-SGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNR 148 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-cccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCC
Confidence 999999999999999999988 44332111111222456788999999999999999999998887554
No 16
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.88 E-value=4.1e-22 Score=170.50 Aligned_cols=133 Identities=22% Similarity=0.236 Sum_probs=103.3
Q ss_pred chhhHHHHHHHHHHhhcccccCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHH
Q 028140 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (213)
Q Consensus 14 ~Y~~aQ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (213)
-|+++|++|+++|+.+.+...+........ .....+.++++++|+++|++|++++++.... . +.. . . ..+
T Consensus 122 ~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~--~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~--~-~~~-~--~--~~~ 191 (283)
T PLN00182 122 LYIGAQLTGSLLASLTLRLMFNVTPEAFFG--TTPTDSSGQALVAEIIISFLLMFVISGVATD--S-RAV-G--E--LAG 191 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccceee--CCCCcchHHHHHHHHHHHHHHHHHHHhheec--c-ccC-C--c--chh
Confidence 799999999999998765544322111111 1112357899999999999999988764322 1 111 1 1 247
Q ss_pred HHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 028140 94 WAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (213)
Q Consensus 94 ~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 157 (213)
+++|+.+++.+++.+++||+|+|||||+++++.++ .|.++|+||++|++|+++|+++++.+..
T Consensus 192 l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 192 IAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-RYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred HHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999755 5899999999999999999999998873
No 17
>PLN00026 aquaporin NIP; Provisional
Probab=99.86 E-value=1.1e-21 Score=168.65 Aligned_cols=133 Identities=23% Similarity=0.258 Sum_probs=103.4
Q ss_pred chhhHHHHHHHHHHhhcccccCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHH
Q 028140 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (213)
Q Consensus 14 ~Y~~aQ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (213)
-|+++|++|+++|+.+.+....+...... .....+.+++++.|+++|++|+++++.+... ++... . ..+
T Consensus 151 ~YiiaQilGAi~aa~~~~~~~~~~~~~g~---t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~---~~~~~---~--~~~ 219 (298)
T PLN00026 151 AYIAAQVSASICASFALKGVFHPFMSGGV---TVPSVSTGQAFALEFIITFNLLFVVTAVATD---TRAVG---E--LAG 219 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCce---eeecccHHHHHHHHHHHHHHHHHhheeeecC---CCCcC---C--ccc
Confidence 69999999999999987665543211111 1123467899999999999999988743211 11111 1 136
Q ss_pred HHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 028140 94 WAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA 158 (213)
Q Consensus 94 ~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 158 (213)
+++|+.+++.+++.+++||+|+|||||+++++.++ +|.++|+||++|++|+++|+++++.+..+
T Consensus 220 l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~-~~~~~wVy~vaPilGAilga~ly~~~~~~ 283 (298)
T PLN00026 220 IAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG-NYRAIWIYLVAPTLGALAGAGTYTAVKLR 283 (298)
T ss_pred hHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC-CchheeHHHHHHHHHHHHHHHHHHHHhCc
Confidence 88999999999999999999999999999999876 89999999999999999999998887633
No 18
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.85 E-value=2.5e-21 Score=161.51 Aligned_cols=136 Identities=23% Similarity=0.136 Sum_probs=103.1
Q ss_pred cchhhHHHHHHHHHHhhcccccCCCC-----CCC-----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCC
Q 028140 13 NKFAERQPIGTAAQTQDGKDYVEPPP-----APL-----FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNT 82 (213)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~ 82 (213)
.-|+.+|++|+++++.+.+....+.. .+. .........+.+|+++.|+++|++++++++...... +..
T Consensus 80 ~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~--~~~ 157 (228)
T cd00333 80 IPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDP--NGP 157 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHcccc--ccC
Confidence 37999999999999887644332111 100 001112234678999999999999999988754321 110
Q ss_pred CCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccC--cchhHHHHHHHHHHHHHHHHHHHHH
Q 028140 83 KCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKL--SLTRALFYMVMQCLGAICGAGVVKG 154 (213)
Q Consensus 83 ~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~--~~~~~~~yi~aQ~lGa~~ga~~~~~ 154 (213)
......++++|+.+.+.++..+++||+|+|||||+++++.++. +|.+.|+||++|++|+++|+++++.
T Consensus 158 ----~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 158 ----PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred ----CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHh
Confidence 1122358899999999999999999999999999999999887 7999999999999999999988764
No 19
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.85 E-value=9.3e-22 Score=163.92 Aligned_cols=143 Identities=20% Similarity=0.133 Sum_probs=112.8
Q ss_pred hhhhcCcchhhHHHHHHHHHHhhcccccCCC--CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCC
Q 028140 7 DVRLGANKFAERQPIGTAAQTQDGKDYVEPP--PAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKC 84 (213)
Q Consensus 7 ~~~~~~~~Y~~aQ~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~ 84 (213)
+...+..-|+++|++|+++|+..++...+.. .............+.++.++.|++.||.+++..++...+..++
T Consensus 84 isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~---- 159 (238)
T KOG0223|consen 84 ISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS---- 159 (238)
T ss_pred CcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc----
Confidence 4456677899999999999999988877653 1111111122334568999999999999999876533221111
Q ss_pred CccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 028140 85 STVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG 159 (213)
Q Consensus 85 ~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~ 159 (213)
...++.+|+++.+.++..+++||++|||||++++++..+. |.++|+||++|++|+++++++++.++.++
T Consensus 160 -----~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~-w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 160 -----ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGS-WDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred -----ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcC-CCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 3358899999999999999999999999999999998774 99999999999999999999999988554
No 20
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.85 E-value=6.6e-21 Score=162.48 Aligned_cols=135 Identities=21% Similarity=0.267 Sum_probs=104.0
Q ss_pred cchhhHHHHHHHHHHhhcccccCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHH
Q 028140 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (213)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i 92 (213)
--|+++|++|+++|+.+.+........ .... ....+.+++++.|+++|+++++++++..... . .. .. ..
T Consensus 124 ~~Yi~aQ~lGa~~ga~l~~~~~~~~~~-~~~~--~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~--~-~~-~~----~~ 192 (274)
T PLN00183 124 PLYITAQTVGSVLATYVGVSVYGVKAD-LMTT--KPAQGCSSAFWVEFIATFIVMFLAASLTSQP--Q-SL-GH----LS 192 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcc-cccC--CCcccHHHHHHHHHHHHHHHHHhhheeeccc--c-CC-CC----ce
Confidence 379999999999999886555432221 1111 1122467999999999999999887654321 1 11 11 13
Q ss_pred HHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 028140 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG 159 (213)
Q Consensus 93 ~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~ 159 (213)
++.+|+.+++.+++.+++||+|+|||||+++++.+ .+|.+.|+||++|++|+++|+++++.++.+.
T Consensus 193 ~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~~~~wvy~vapilGailaa~l~~~l~~~~ 258 (274)
T PLN00183 193 GFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDFKDIWIYITAPTIGAVAGALMFHLLRLRT 258 (274)
T ss_pred ehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CChhheehHHHHHHHHHHHHHHHHHHHhccC
Confidence 67899999999999999999999999999999986 5899999999999999999999999998444
No 21
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.83 E-value=2.2e-20 Score=154.65 Aligned_cols=133 Identities=22% Similarity=0.149 Sum_probs=100.1
Q ss_pred cchhhHHHHHHHHHHhhcccccCCCCCCC-CCCC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchh
Q 028140 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPL-FEPG-ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQ 90 (213)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~ 90 (213)
.-|+++|++|+++++.+.+....+...+. .... .....+.++.++.|+++|++++++++..... +++.. . ..
T Consensus 80 ~~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~--~~~~~--~--~~ 153 (216)
T TIGR00861 80 PVYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDP--RNRVP--R--GG 153 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecC--CCCCC--C--Cc
Confidence 37999999999999987655443221111 0011 1122467899999999999999988754332 11111 1 11
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhc-cCcchhHHHHHHHHHHHHHHHHHH
Q 028140 91 GIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR-KLSLTRALFYMVMQCLGAICGAGV 151 (213)
Q Consensus 91 ~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g-~~~~~~~~~yi~aQ~lGa~~ga~~ 151 (213)
..++.+|+.++..++..+++||+|+|||||+++++.+ ..+|.+.|+||++|++|+++|+.+
T Consensus 154 ~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 154 FAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred cHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHh
Confidence 3589999999999999999999999999999999975 578999999999999999999876
No 22
>PLN00184 aquaporin NIP1; Provisional
Probab=99.82 E-value=8.5e-20 Score=157.13 Aligned_cols=138 Identities=22% Similarity=0.221 Sum_probs=102.7
Q ss_pred cchhhHHHHHHHHHHhhcccccCCCCC---CCC--CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCcc
Q 028140 13 NKFAERQPIGTAAQTQDGKDYVEPPPA---PLF--EPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV 87 (213)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~ 87 (213)
.-|+++|++|+++|+.+.+........ ... ........+.+++++.|+++|++|++++++.... .. ...
T Consensus 133 ~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~--~~--~~~-- 206 (296)
T PLN00184 133 PAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATD--NR--AIG-- 206 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheecc--Cc--CCC--
Confidence 369999999999999876544321110 000 0001112367899999999999999988764321 11 111
Q ss_pred chhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 028140 88 GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG 159 (213)
Q Consensus 88 ~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~ 159 (213)
...++++|+.+++.+++.+++||+++||||++++++... .|.++|+||++|++|+++|+++++.+..++
T Consensus 207 --~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~-~~~~~WVy~vgPilGa~laal~y~~l~~~~ 275 (296)
T PLN00184 207 --ELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG-CYKGIWIYIVAPTLGAIAGAWVYNTVRYTD 275 (296)
T ss_pred --cchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh-cccccchHHhHHHHHHHHHHHHHHHHhcCC
Confidence 123788999999999999999999999999999999754 578999999999999999999998887433
No 23
>PLN00166 aquaporin TIP2; Provisional
Probab=99.79 E-value=1e-18 Score=147.47 Aligned_cols=134 Identities=15% Similarity=0.136 Sum_probs=102.8
Q ss_pred chhhHHHHHHHHHHhhcccccCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHH
Q 028140 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (213)
Q Consensus 14 ~Y~~aQ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (213)
-|+++|++|+++++.+.+...+....+... ...+.+.+|.++.|+++|++|++..+...... ++... ....+
T Consensus 103 ~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~--~~~~~----~~~~p 174 (250)
T PLN00166 103 FYWIAQCLGSIVACLLLVFVTNGESVPTHG--VAAGLGAIEGVVMEIVVTFALVYTVYATAADP--KKGSL----GTIAP 174 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCcccc--cCCCCcHHHHHHHHHHHHHHHHHHHHHhcccc--ccccc----ccchh
Confidence 799999999999999776554322111111 11234678999999999999999887643211 11000 01247
Q ss_pred HHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 028140 94 WAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (213)
Q Consensus 94 ~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~ 156 (213)
+.+|+.++..+...++.||+.+||||++++++..+ .|.++|+||++|++|+++|+++++.++
T Consensus 175 ~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~-~~~~~wvywvgPi~Ga~~aa~~y~~l~ 236 (250)
T PLN00166 175 IAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG-DFSQIWIYWVGPLVGGALAGLIYGDVF 236 (250)
T ss_pred HHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC-CCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999765 689999999999999999999998876
No 24
>PRK05420 aquaporin Z; Provisional
Probab=99.78 E-value=1.3e-18 Score=145.41 Aligned_cols=135 Identities=17% Similarity=0.171 Sum_probs=100.7
Q ss_pred cchhhHHHHHHHHHHhhcccccCCCCCCC----------CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCC
Q 028140 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPL----------FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNT 82 (213)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~ 82 (213)
..|+++|++|+++|+.+++.....+.... .........+.+++++.|+++|++|++.++..... ++
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~~---~~- 157 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATDK---RA- 157 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhCC---CC-
Confidence 47999999999999987654432211100 00001123367899999999999999988754321 11
Q ss_pred CCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhcc-CcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 028140 83 KCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK-LSLTRALFYMVMQCLGAICGAGVVKGFM 156 (213)
Q Consensus 83 ~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~-~~~~~~~~yi~aQ~lGa~~ga~~~~~~~ 156 (213)
.. + ..++.+|+.+....+..++.||+.+||||++++++..+ ..|.++|+||++|++|+++++++++.++
T Consensus 158 -~~--~--~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~ 227 (231)
T PRK05420 158 -PA--G--FAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLL 227 (231)
T ss_pred -CC--c--chHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHh
Confidence 11 1 24788999999999999999999999999999998643 3446899999999999999999998877
No 25
>PLN00027 aquaporin TIP; Provisional
Probab=99.78 E-value=2.8e-18 Score=145.13 Aligned_cols=136 Identities=17% Similarity=0.114 Sum_probs=102.4
Q ss_pred cchhhHHHHHHHHHHhhcccccCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHH
Q 028140 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (213)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i 92 (213)
--|+.+|++|+++++...+...+........ .....+.+++++.|+++|++|++.++....... +.. . + ...
T Consensus 104 ~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~--~~~--~-~-~~~ 175 (252)
T PLN00027 104 ILYWIAQLLGSVVACLLLKFSTGGLETSAFS--LSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPK--KGD--L-G-IIA 175 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccccc--CCCCccHHHHHHHHHHHHHHHHHHHHHhccccc--cCC--c-c-chH
Confidence 3699999999999998765443221111111 112346789999999999999998765432111 111 0 1 134
Q ss_pred HHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 028140 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (213)
Q Consensus 93 ~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 157 (213)
++.+|+.+...+++.++.||+.+||||++++++... .|.++|+||++|++|+++|+.+++.++.
T Consensus 176 p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~-~~~~~wvy~vgP~~Ga~laa~~y~~l~~ 239 (252)
T PLN00027 176 PIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWTNHWVYWAGPLIGGGIAGLVYELIFI 239 (252)
T ss_pred HHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh-cchhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 788899999999999999999999999999999765 6899999999999999999999998873
No 26
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.75 E-value=5.3e-18 Score=146.20 Aligned_cols=140 Identities=18% Similarity=0.113 Sum_probs=100.2
Q ss_pred cchhhHHHHHHHHHHhhcccccCCC--------------CCCCCC-CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 028140 13 NKFAERQPIGTAAQTQDGKDYVEPP--------------PAPLFE-PGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV 77 (213)
Q Consensus 13 ~~Y~~aQ~~G~~~~~~~~~~~~~~~--------------~~~~~~-~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~ 77 (213)
.-|+++|++|+++|+.+++...++. ...... .......+.+++++.|+++|++|++.++.....
T Consensus 129 ~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~~d~- 207 (294)
T PTZ00016 129 PGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAITDP- 207 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 3799999999999999764332210 000000 001113467899999999999999988754321
Q ss_pred cccCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhc-----cCcch----hHHHHHHHHHHHHHHH
Q 028140 78 VKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR-----KLSLT----RALFYMVMQCLGAICG 148 (213)
Q Consensus 78 ~~~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g-----~~~~~----~~~~yi~aQ~lGa~~g 148 (213)
++. .... ..++++|+.+.++.++.++.||+.+||||++++++.. +..|. +.|+||++|++|+++|
T Consensus 208 -~~~-~~~~----~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~a 281 (294)
T PTZ00016 208 -NNC-PAFN----YLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLG 281 (294)
T ss_pred -ccC-CCcC----cccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHH
Confidence 111 1111 2377889999888999999999999999999999863 33454 5899999999999999
Q ss_pred HHHHHHHhccc
Q 028140 149 AGVVKGFMGAG 159 (213)
Q Consensus 149 a~~~~~~~~~~ 159 (213)
+++++.+.+++
T Consensus 282 ally~~ll~~~ 292 (294)
T PTZ00016 282 MFLYDKFIPPL 292 (294)
T ss_pred HHHHHHHhCCC
Confidence 99999888443
No 27
>PLN00167 aquaporin TIP5; Provisional
Probab=99.75 E-value=8.7e-18 Score=142.25 Aligned_cols=139 Identities=18% Similarity=0.115 Sum_probs=103.6
Q ss_pred CcchhhHHHHHHHHHHhhcccccCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhH
Q 028140 12 ANKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (213)
Q Consensus 12 ~~~Y~~aQ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (213)
.--|+++|++|+++++.+.+........+..... ...+.+++++.|+++|+++++..+.... .++ .... ..
T Consensus 105 ~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~E~i~T~~L~~~i~~~~~--~~~-~~~~----~~ 175 (256)
T PLN00167 105 AMFYWISQMLASVMACLFLKVTTVGQHVPTYKIA--EEMTGFGASVLEGVLTFGLVYTVYAAGD--PRR-GLLG----AI 175 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhccccccccccC--cccchHHHHHHHHHHHHHHHHHHHHhcc--ccc-cCCC----Cc
Confidence 3479999999999999877655432111111111 1235678999999999999998764321 111 1111 12
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 028140 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQ 160 (213)
Q Consensus 92 i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~ 160 (213)
.++.+|+.+....+..++.||+.+||||++++.+..+ +|.+.|+||++|++|+++++.+++.++.++.
T Consensus 176 ~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~-~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~ 243 (256)
T PLN00167 176 GPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG-SFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQ 243 (256)
T ss_pred chHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc-CccCcEEEeHHHHHHHHHHHHHHHHHhCCCc
Confidence 3788899999999999999999999999999999764 5889999999999999999999999885544
No 28
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.74 E-value=9.6e-18 Score=139.56 Aligned_cols=132 Identities=22% Similarity=0.200 Sum_probs=98.2
Q ss_pred chhhHHHHHHHHHHhhcccccCCC--CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhH
Q 028140 14 KFAERQPIGTAAQTQDGKDYVEPP--PAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (213)
Q Consensus 14 ~Y~~aQ~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (213)
-|+++|++|+++|+.+.+...++. .............+.++.++.|+++|+++++......... ++.. .+. .
T Consensus 94 ~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~--~~~~---~~~-~ 167 (227)
T PF00230_consen 94 VYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDK--RKFP---LGP-L 167 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTT--SSST---SSG-G
T ss_pred eEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhcccc--cccc---ccc-c
Confidence 699999999999999876555432 1111111222334678999999999999998876543221 1111 111 2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHH
Q 028140 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV 152 (213)
Q Consensus 92 i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~ 152 (213)
.++.+|+.+.+..+..++.||+.+||||++++.+.... |.+.|+||++|++|+++|++++
T Consensus 168 ~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~-~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 168 APLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI-WDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-HTTTTHHHHHHHHHHHHHHHHH
T ss_pred cceeEEEEEeecccccccccccccCchhhcCceeeccc-CCeEEEEEehHHHHHHHHHhhC
Confidence 47888988988888889999999999999999997765 9999999999999999999874
No 29
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.72 E-value=3.9e-17 Score=136.07 Aligned_cols=135 Identities=21% Similarity=0.174 Sum_probs=98.2
Q ss_pred chhhHHHHHHHHHHhhcccccCCC-------CCCCCCC--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCC
Q 028140 14 KFAERQPIGTAAQTQDGKDYVEPP-------PAPLFEP--GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKC 84 (213)
Q Consensus 14 ~Y~~aQ~~G~~~~~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~ 84 (213)
.||++|++|+++|+.++.....+. +....+. ......+.++.++.|+++|++|++.+.+... ..+.
T Consensus 88 ~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~--~~~~--- 162 (241)
T COG0580 88 PYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTD--DGNA--- 162 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhc--cCcc---
Confidence 699999999999998763222211 1111111 1122236789999999999999998865332 1111
Q ss_pred CccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhcc----Cc----chhHHHHHHHHHHHHHHHHHHHHHHh
Q 028140 85 STVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK----LS----LTRALFYMVMQCLGAICGAGVVKGFM 156 (213)
Q Consensus 85 ~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~----~~----~~~~~~yi~aQ~lGa~~ga~~~~~~~ 156 (213)
+.+ ..++.+|+.++.+..+.++.||..+||||++++.+... .+ ..+.|+||++|++|+++|+++++.++
T Consensus 163 -~~~--~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~ 239 (241)
T COG0580 163 -NAG--FAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLL 239 (241)
T ss_pred -ccc--chHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHc
Confidence 111 34789999999999999999999999999999987321 11 14799999999999999999998776
No 30
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.19 E-value=2.6e-11 Score=103.00 Aligned_cols=137 Identities=20% Similarity=0.167 Sum_probs=94.8
Q ss_pred chhhHHHHHHHHHHhhccccc--------C------CC--CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 028140 14 KFAERQPIGTAAQTQDGKDYV--------E------PP--PAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV 77 (213)
Q Consensus 14 ~Y~~aQ~~G~~~~~~~~~~~~--------~------~~--~~~~~~~~~~~~~~~~~~~~~E~igT~~lv~~~~~~~~~~ 77 (213)
-|+++|.+|+++|++.+.... . .+ .......-.....+.+++++-|++||.+|+...+. +..
T Consensus 113 ~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l~a--I~D 190 (316)
T KOG0224|consen 113 VYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCLFA--ITD 190 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhheeE--Eec
Confidence 499999999999999762111 1 00 00001111223457899999999999999876543 222
Q ss_pred cccCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhh------cc--Ccc--hhHHHHHHHHHHHHHH
Q 028140 78 VKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLA------RK--LSL--TRALFYMVMQCLGAIC 147 (213)
Q Consensus 78 ~~~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~------g~--~~~--~~~~~yi~aQ~lGa~~ 147 (213)
..+ +... -..++.+|+.++++-.++|--+|--+||||.+++.+. |. +++ .-.|+-|+++++|+++
T Consensus 191 ~rN---~~p~--g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai~ 265 (316)
T KOG0224|consen 191 KRN---PIPT--GLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAIL 265 (316)
T ss_pred CCC---CCCc--chhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhhhhh
Confidence 222 1111 2348889999999999999999999999999998764 11 111 2356779999999999
Q ss_pred HHHHHHHHhc
Q 028140 148 GAGVVKGFMG 157 (213)
Q Consensus 148 ga~~~~~~~~ 157 (213)
|++++..+.+
T Consensus 266 G~~iY~~~Ig 275 (316)
T KOG0224|consen 266 GGWIYDFFIG 275 (316)
T ss_pred hhhhheeeee
Confidence 9999988763
No 31
>PRK10805 formate transporter; Provisional
Probab=80.72 E-value=37 Score=29.38 Aligned_cols=100 Identities=13% Similarity=0.119 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHhhcCC-CCcccchhhHHHHHhhccCcchhHHHH----HHHHHHHHHHHHHHHHHHhccccccccCC
Q 028140 92 IAWAFGGMIFVLVYCTAGI-SGGHINPAVTLGLFLARKLSLTRALFY----MVMQCLGAICGAGVVKGFMGAGQYGRLAG 166 (213)
Q Consensus 92 i~~~~G~~v~~~i~~~~~i-SG~hlNPAvTla~~~~g~~~~~~~~~y----i~aQ~lGa~~ga~~~~~~~~~~~~~~~~~ 166 (213)
.++.+.+.+..+++.-+.. || |-..+++ .+.++.+|.+..-. +++-++|+++-+.+++.. ..+....+
T Consensus 71 ~~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s---~~~~~~~~ 143 (285)
T PRK10805 71 GGICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLS---GEYMTANG 143 (285)
T ss_pred HHHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---cccccCcc
Confidence 3455555555555554443 44 5444444 56778888877744 445555555555444321 11111000
Q ss_pred C--cc--cc---cCCCChhHHHHHHHHHHHHHHHHHHHH
Q 028140 167 G--AN--VV---AHGYTKGDGLGAEIIGTFVLVYTVFSA 198 (213)
Q Consensus 167 ~--~~--~~---~~~~~~~~~~~~E~i~T~~L~~~il~~ 198 (213)
. .. .. ..+.+.++.|+-=+.|.++.++.++..
T Consensus 144 ~~~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~~ 182 (285)
T PRK10805 144 QWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00 123567888888899999999888753
No 32
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=66.96 E-value=82 Score=27.03 Aligned_cols=143 Identities=17% Similarity=0.132 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCccchhHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccC
Q 028140 50 WSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKL 129 (213)
Q Consensus 50 ~~~~~~~~~E~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~ 129 (213)
+.++++.++-+.-++-+++.... .....+ ...+...+.-++.+++.+..+++.-+..--+ |=-........+++
T Consensus 29 ~~~l~ai~AG~~i~lg~~~~~~~---~~~~~~-~~~~~~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~I 102 (265)
T COG2116 29 KLLLLAILAGAFIGLGFLFYITV---GTGLPG-APGGLAKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKI 102 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh---cccCCC-CCcchHHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCc
Confidence 34667777766655555443321 111111 1122234444566666666666654442111 21122223456788
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhccccccccCCCcc---c--c---cCCCChhHHHHHHHHHHHHHHHHHHHH
Q 028140 130 SLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAN---V--V---AHGYTKGDGLGAEIIGTFVLVYTVFSA 198 (213)
Q Consensus 130 ~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~---~--~---~~~~~~~~~~~~E~i~T~~L~~~il~~ 198 (213)
+|++.+--|.--.+|=++|++++-+++.-.......++.. . . .-+.+..+.|.-=.+|.++.++.++..
T Consensus 103 s~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~ 179 (265)
T COG2116 103 SWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANGQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMS 179 (265)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccchhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988877777666777777766655441111001111111 0 0 123455788888888888888877654
No 33
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=66.19 E-value=80 Score=26.63 Aligned_cols=108 Identities=15% Similarity=0.057 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhcc-ccccccCCC-
Q 028140 90 QGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA-GQYGRLAGG- 167 (213)
Q Consensus 90 ~~i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~-~~~~~~~~~- 167 (213)
+..++.+++.+..+++.-+..-- =|-.......+.++.+|.+..--|.-=.+|=++|++++-.+... ..+...+..
T Consensus 58 l~~g~~F~~Gl~lIv~~g~eLfT--gn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~ 135 (250)
T PF01226_consen 58 LVGGLVFPIGLVLIVFLGGELFT--GNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMG 135 (250)
T ss_dssp HHHHHHHTHHHHHHHHHT---TT--TTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHH
T ss_pred HHHHHHHHHHHHHHHHhcchhcc--cchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHH
Confidence 44456666666656655443311 24444445566788888887665555555555555554433311 111100000
Q ss_pred --cc---cccCCCChhHHHHHHHHHHHHHHHHHHHHc
Q 028140 168 --AN---VVAHGYTKGDGLGAEIIGTFVLVYTVFSAT 199 (213)
Q Consensus 168 --~~---~~~~~~~~~~~~~~E~i~T~~L~~~il~~~ 199 (213)
.. ...-..+.++.|+.=.+|.++.++.++...
T Consensus 136 ~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~~ 172 (250)
T PF01226_consen 136 EYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLAF 172 (250)
T ss_dssp HHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 011235678899999999999999888764
No 34
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=49.71 E-value=1.5e+02 Score=24.68 Aligned_cols=75 Identities=20% Similarity=0.194 Sum_probs=41.3
Q ss_pred HHhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhcc-ccc-cccCC---Cccc---ccCCCChhHHHHHHHHHHHHHHHH
Q 028140 123 LFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA-GQY-GRLAG---GANV---VAHGYTKGDGLGAEIIGTFVLVYT 194 (213)
Q Consensus 123 ~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~-~~~-~~~~~---~~~~---~~~~~~~~~~~~~E~i~T~~L~~~ 194 (213)
..+.++.+|.+..-.|.--.+|=++|+.+.-.+... ... +..+. .... ...+.+..+.|+.=+.|.++..+.
T Consensus 75 ~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gilcn~lV~la 154 (239)
T TIGR00790 75 ALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGILCNWLVCLA 154 (239)
T ss_pred HHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHH
Confidence 355778888877666655555555555555433211 110 10000 0000 012356788888888888888888
Q ss_pred HHH
Q 028140 195 VFS 197 (213)
Q Consensus 195 il~ 197 (213)
+..
T Consensus 155 v~~ 157 (239)
T TIGR00790 155 VWM 157 (239)
T ss_pred HHH
Confidence 764
No 35
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=46.60 E-value=6.1 Score=34.93 Aligned_cols=22 Identities=32% Similarity=0.576 Sum_probs=17.5
Q ss_pred hhcCCCCcccchhhHHHHHhhc
Q 028140 106 CTAGISGGHINPAVTLGLFLAR 127 (213)
Q Consensus 106 ~~~~iSG~hlNPAvTla~~~~g 127 (213)
+.++-||||+.||++++-.+..
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHHh
Confidence 3455699999999999987743
No 36
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=43.07 E-value=5 Score=29.73 Aligned_cols=19 Identities=32% Similarity=0.506 Sum_probs=16.1
Q ss_pred CCCcccchhhHHHHHhhcc
Q 028140 110 ISGGHINPAVTLGLFLARK 128 (213)
Q Consensus 110 iSG~hlNPAvTla~~~~g~ 128 (213)
-|+||+||.+.++-.+.++
T Consensus 7 Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 7 GTRGHVYPFLALARALRRR 25 (139)
T ss_dssp SSHHHHHHHHHHHHHHHHT
T ss_pred CChhHHHHHHHHHHHHhcc
Confidence 4889999999999988543
No 37
>KOG3415 consensus Putative Rab5-interacting protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=42.21 E-value=12 Score=27.93 Aligned_cols=24 Identities=21% Similarity=0.058 Sum_probs=21.1
Q ss_pred hhhhhhcCcchhhHHHHHHHHHHh
Q 028140 5 EEDVRLGANKFAERQPIGTAAQTQ 28 (213)
Q Consensus 5 ~e~~~~~~~~Y~~aQ~~G~~~~~~ 28 (213)
++++++.|.-||..|++|-++|-.
T Consensus 36 ~DKdellDViyW~rQVi~l~lGvi 59 (129)
T KOG3415|consen 36 PDKDELLDVIYWIRQVIGLILGVI 59 (129)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999999988765
No 38
>PRK09713 focB putative formate transporter; Provisional
Probab=39.14 E-value=2.5e+02 Score=24.19 Aligned_cols=101 Identities=12% Similarity=0.052 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcccchhhHHHHHhhccCcchhHHHH----HHHHHHHHHHHHHHHHHHhccccccccCC-
Q 028140 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFY----MVMQCLGAICGAGVVKGFMGAGQYGRLAG- 166 (213)
Q Consensus 92 i~~~~G~~v~~~i~~~~~iSG~hlNPAvTla~~~~g~~~~~~~~~y----i~aQ~lGa~~ga~~~~~~~~~~~~~~~~~- 166 (213)
-++.+++.+.++++.-+..--++. . ++.....++.+|++..-. +++-++|+++-+.+++.- ..+...+.
T Consensus 70 ~g~~F~vGLilIv~~g~ELfTgN~--~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s---~~~~~~~~~ 143 (282)
T PRK09713 70 GGLCFTLGFILLAVCGTSLFTSSV--M-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFS---GLVMSENAM 143 (282)
T ss_pred HHHHHHHHHHHHHHhCccccHHHH--H-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ccccccchh
Confidence 345555556556655444322221 1 222245778888777744 445556655555554321 11111000
Q ss_pred -C--cccc---cCCCChhHHHHHHHHHHHHHHHHHHHH
Q 028140 167 -G--ANVV---AHGYTKGDGLGAEIIGTFVLVYTVFSA 198 (213)
Q Consensus 167 -~--~~~~---~~~~~~~~~~~~E~i~T~~L~~~il~~ 198 (213)
+ .... .-+.+..+.|+--+.|.++.++.++..
T Consensus 144 ~~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~~ 181 (282)
T PRK09713 144 WGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMS 181 (282)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 123567899999999999999988754
No 39
>PRK09979 putative rho operon leader peptide; Provisional
Probab=21.19 E-value=42 Score=18.59 Aligned_cols=16 Identities=31% Similarity=0.571 Sum_probs=12.3
Q ss_pred cCCCCcccchhhHHHH
Q 028140 108 AGISGGHINPAVTLGL 123 (213)
Q Consensus 108 ~~iSG~hlNPAvTla~ 123 (213)
-.+||..+||.--+.-
T Consensus 4 eqisgsslnpscrfss 19 (33)
T PRK09979 4 EQISGSSLNPSCRFSS 19 (33)
T ss_pred ccccCCcCCccccccc
Confidence 3589999999876653
No 40
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=20.16 E-value=2.5e+02 Score=20.46 Aligned_cols=45 Identities=18% Similarity=0.312 Sum_probs=34.8
Q ss_pred CcccchhhHHHHHhh-cc-CcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 028140 112 GGHINPAVTLGLFLA-RK-LSLTRALFYMVMQCLGAICGAGVVKGFM 156 (213)
Q Consensus 112 G~hlNPAvTla~~~~-g~-~~~~~~~~yi~aQ~lGa~~ga~~~~~~~ 156 (213)
||.+.|-+.+=--+. |. .+..|..+|+++-++|+=.|..+++++.
T Consensus 53 GGTfd~~~~iE~g~~~G~~~~~~KQ~l~Il~Af~GA~~g~~lI~wl~ 99 (102)
T PF14034_consen 53 GGTFDTFRSIEKGFFEGELSDIIKQLLYILSAFLGAHTGYILIRWLT 99 (102)
T ss_pred hcCchHHHHHHhHhcCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 567777777755442 22 2567899999999999999999999886
Done!