Query 028143
Match_columns 213
No_of_seqs 56 out of 58
Neff 2.1
Searched_HMMs 29240
Date Mon Mar 25 11:00:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028143.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028143hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3maj_A DNA processing chain A; 97.9 0.00014 4.7E-09 65.6 13.2 133 70-208 127-266 (382)
2 2iz6_A Molybdenum cofactor car 97.6 0.00021 7.1E-09 57.6 7.6 123 69-210 12-137 (176)
3 2nx2_A Hypothetical protein YP 97.4 0.0024 8.4E-08 51.3 12.1 140 71-212 3-169 (181)
4 3uqz_A DNA processing protein 97.4 0.0031 1.1E-07 55.1 13.1 133 70-208 106-245 (288)
5 2a33_A Hypothetical protein; s 97.3 0.00045 1.6E-08 57.1 6.3 114 68-197 11-127 (215)
6 1rcu_A Conserved hypothetical 97.2 0.0021 7.3E-08 52.7 9.8 119 70-210 23-148 (195)
7 3qua_A Putative uncharacterize 97.2 0.001 3.5E-08 54.8 8.0 68 68-137 20-89 (199)
8 1weh_A Conserved hypothetical 97.2 0.00055 1.9E-08 54.2 5.9 63 71-135 2-66 (171)
9 1t35_A Hypothetical protein YV 97.2 0.00096 3.3E-08 53.8 7.3 114 71-200 2-118 (191)
10 1wek_A Hypothetical protein TT 97.1 0.0015 5E-08 54.1 7.9 117 65-201 32-153 (217)
11 1ydh_A AT5G11950; structural g 96.6 0.0049 1.7E-07 51.1 7.3 124 69-210 8-141 (216)
12 3sbx_A Putative uncharacterize 96.6 0.007 2.4E-07 49.5 8.0 69 67-137 10-80 (189)
13 3gh1_A Predicted nucleotide-bi 93.9 0.18 6.3E-06 47.2 8.4 69 67-136 144-218 (462)
14 3bq9_A Predicted rossmann fold 93.2 0.32 1.1E-05 45.4 8.6 69 68-137 143-217 (460)
15 1j0a_A 1-aminocyclopropane-1-c 67.1 17 0.00059 29.9 7.1 77 83-161 53-130 (325)
16 3bbn_B Ribosomal protein S2; s 65.7 8 0.00027 32.6 4.9 48 69-122 63-113 (231)
17 1t1j_A Hypothetical protein; s 64.5 6.2 0.00021 30.5 3.7 40 171-210 75-117 (125)
18 4h3v_A Oxidoreductase domain p 64.4 12 0.00039 30.1 5.4 51 116-170 67-118 (390)
19 3nra_A Aspartate aminotransfer 57.1 6.1 0.00021 31.4 2.5 43 80-122 79-125 (407)
20 3iix_A Biotin synthetase, puta 54.7 83 0.0028 25.4 9.6 82 57-146 88-170 (348)
21 3g7q_A Valine-pyruvate aminotr 53.2 9.1 0.00031 30.6 3.0 49 85-133 77-133 (417)
22 3h14_A Aminotransferase, class 50.7 8 0.00027 30.9 2.2 38 85-122 70-114 (391)
23 2dr1_A PH1308 protein, 386AA l 49.1 9.1 0.00031 29.9 2.3 19 102-120 74-92 (386)
24 3kax_A Aminotransferase, class 48.5 13 0.00044 29.2 3.1 23 99-121 82-104 (383)
25 4dq6_A Putative pyridoxal phos 47.8 13 0.00044 29.2 3.0 24 99-122 90-113 (391)
26 4a3s_A 6-phosphofructokinase; 47.8 7.3 0.00025 33.7 1.7 18 103-121 6-25 (319)
27 3mc6_A Sphingosine-1-phosphate 47.6 13 0.00044 31.2 3.2 37 85-121 109-148 (497)
28 3ezs_A Aminotransferase ASPB; 47.1 17 0.0006 28.5 3.7 20 101-120 84-103 (376)
29 3dzz_A Putative pyridoxal 5'-p 47.0 18 0.00062 28.4 3.8 38 85-122 64-108 (391)
30 2bkw_A Alanine-glyoxylate amin 45.9 14 0.00049 28.8 3.0 20 101-120 61-80 (385)
31 3vax_A Putative uncharacterize 45.9 12 0.0004 29.7 2.5 20 101-120 82-101 (400)
32 4gs5_A Acyl-COA synthetase (AM 45.7 6.3 0.00021 32.5 0.9 10 102-111 42-51 (358)
33 2q5c_A NTRC family transcripti 45.1 25 0.00086 27.7 4.3 37 56-93 81-117 (196)
34 4hvk_A Probable cysteine desul 44.6 14 0.00047 28.6 2.6 19 154-172 144-165 (382)
35 4eb5_A Probable cysteine desul 43.9 18 0.00061 28.2 3.2 21 153-173 143-166 (382)
36 1iug_A Putative aspartate amin 43.5 14 0.00046 28.5 2.5 13 161-173 137-149 (352)
37 3kgw_A Alanine-glyoxylate amin 43.2 27 0.00092 27.2 4.2 38 85-122 58-97 (393)
38 1tv8_A MOAA, molybdenum cofact 42.7 54 0.0018 26.7 6.0 41 58-100 55-95 (340)
39 2z9v_A Aspartate aminotransfer 42.2 14 0.00049 29.1 2.5 19 101-119 61-79 (392)
40 1vjo_A Alanine--glyoxylate ami 41.9 14 0.00049 29.2 2.4 37 85-121 69-107 (393)
41 1c7n_A Cystalysin; transferase 41.6 16 0.00055 29.1 2.7 37 85-121 68-111 (399)
42 1svv_A Threonine aldolase; str 41.0 18 0.00061 27.9 2.8 37 84-120 50-87 (359)
43 1eg5_A Aminotransferase; PLP-d 40.7 23 0.00079 27.5 3.4 35 86-120 47-82 (384)
44 2huf_A Alanine glyoxylate amin 40.2 16 0.00053 28.9 2.4 19 102-120 73-91 (393)
45 4gqa_A NAD binding oxidoreduct 40.2 1.6E+02 0.0055 24.5 11.1 53 116-172 88-141 (412)
46 3f9t_A TDC, L-tyrosine decarbo 39.4 25 0.00086 27.2 3.4 37 86-122 72-109 (397)
47 2dgk_A GAD-beta, GADB, glutama 39.0 24 0.00083 29.3 3.5 39 83-121 81-125 (452)
48 3hno_A Pyrophosphate-dependent 38.8 13 0.00045 33.6 2.0 18 103-121 8-27 (419)
49 2c0r_A PSAT, phosphoserine ami 38.7 11 0.00038 29.7 1.3 39 84-122 50-91 (362)
50 1pfk_A Phosphofructokinase; tr 38.5 13 0.00046 32.4 1.9 19 103-122 7-27 (320)
51 1zxx_A 6-phosphofructokinase; 38.5 13 0.00046 32.4 1.9 19 103-122 6-26 (319)
52 2v9d_A YAGE; dihydrodipicolini 38.2 1.9E+02 0.0065 24.8 11.4 142 39-186 32-192 (343)
53 1kmj_A Selenocysteine lyase; p 37.7 18 0.00062 28.4 2.4 35 85-119 69-105 (406)
54 1sff_A 4-aminobutyrate aminotr 37.5 15 0.00052 29.5 2.0 49 83-133 84-134 (426)
55 3qm2_A Phosphoserine aminotran 37.4 23 0.00078 30.4 3.2 45 86-131 75-122 (386)
56 3ele_A Amino transferase; RER0 36.6 19 0.00064 28.7 2.4 23 99-121 99-121 (398)
57 2zc0_A Alanine glyoxylate tran 36.3 14 0.00049 29.5 1.6 37 85-121 77-120 (407)
58 2is8_A Molybdopterin biosynthe 36.1 27 0.00093 26.6 3.1 51 58-113 25-76 (164)
59 1rv3_A Serine hydroxymethyltra 35.9 9.8 0.00034 32.7 0.7 20 102-122 114-133 (483)
60 1j32_A Aspartate aminotransfer 35.8 15 0.0005 29.2 1.6 22 100-121 91-112 (388)
61 3lvm_A Cysteine desulfurase; s 35.5 29 0.00098 27.8 3.3 21 153-173 168-191 (423)
62 2fnu_A Aminotransferase; prote 35.5 23 0.0008 27.6 2.7 35 84-119 33-67 (375)
63 3rpz_A ADP/ATP-dependent NAD(P 35.4 30 0.001 29.1 3.6 36 99-135 30-68 (279)
64 3hdo_A Histidinol-phosphate am 35.3 37 0.0013 26.7 3.9 36 86-121 68-104 (360)
65 2e7j_A SEP-tRNA:Cys-tRNA synth 35.3 15 0.00052 28.6 1.6 21 153-173 152-175 (371)
66 2ch1_A 3-hydroxykynurenine tra 35.3 24 0.00083 27.8 2.8 14 160-173 158-171 (396)
67 3ffh_A Histidinol-phosphate am 35.2 22 0.00074 27.9 2.5 36 86-121 70-106 (363)
68 2g2c_A Putative molybdenum cof 35.0 30 0.001 26.4 3.3 32 81-112 51-82 (167)
69 1mkz_A Molybdenum cofactor bio 34.7 28 0.00094 26.9 3.0 50 58-112 32-82 (172)
70 3dyd_A Tyrosine aminotransfera 33.9 20 0.0007 29.5 2.2 37 85-121 98-140 (427)
71 3euc_A Histidinol-phosphate am 33.6 18 0.00062 28.4 1.8 38 85-122 69-108 (367)
72 3frk_A QDTB; aminotransferase, 33.6 24 0.00081 28.0 2.5 20 154-173 130-149 (373)
73 2qgq_A Protein TM_1862; alpha- 33.2 1.6E+02 0.0053 24.0 7.4 61 57-118 37-106 (304)
74 3mad_A Sphingosine-1-phosphate 33.0 24 0.00082 30.0 2.6 39 84-122 140-183 (514)
75 3zrp_A Serine-pyruvate aminotr 32.7 23 0.00079 27.5 2.2 19 102-121 57-75 (384)
76 3fdb_A Beta C-S lyase, putativ 32.7 26 0.00089 27.4 2.6 23 99-121 81-103 (377)
77 3pzy_A MOG; ssgcid, seattle st 32.6 35 0.0012 26.4 3.3 28 86-113 53-80 (164)
78 2yrr_A Aminotransferase, class 32.5 16 0.00054 28.0 1.2 19 102-120 55-73 (353)
79 3nyq_A Malonyl-COA ligase; A/B 32.3 15 0.0005 31.4 1.2 10 102-111 160-169 (505)
80 3get_A Histidinol-phosphate am 32.3 30 0.001 27.1 2.9 36 86-121 68-104 (365)
81 3rg2_A Enterobactin synthase c 32.2 14 0.00048 32.5 1.0 10 102-111 189-198 (617)
82 3t18_A Aminotransferase class 32.2 26 0.00088 28.2 2.5 21 101-121 103-123 (413)
83 1uuy_A CNX1, molybdopterin bio 32.1 33 0.0011 26.2 3.0 32 81-112 52-84 (167)
84 4dg8_A PA1221; ANL superfamily 32.0 15 0.00051 32.8 1.2 10 102-111 169-178 (620)
85 3ly1_A Putative histidinol-pho 32.0 21 0.0007 27.9 1.9 20 101-120 70-89 (354)
86 2pbq_A Molybdenum cofactor bio 31.9 34 0.0012 26.5 3.1 51 58-112 29-81 (178)
87 2z61_A Probable aspartate amin 31.9 24 0.00081 27.9 2.2 21 100-120 90-110 (370)
88 2xzm_B RPS0E; ribosome, transl 31.8 22 0.00077 30.2 2.2 55 69-133 65-123 (241)
89 3kxw_A Saframycin MX1 syntheta 31.7 15 0.0005 31.5 1.0 10 102-111 172-181 (590)
90 1b5p_A Protein (aspartate amin 30.9 20 0.00067 28.8 1.6 37 85-121 70-113 (385)
91 2cb1_A O-acetyl homoserine sul 30.8 32 0.0011 28.4 2.9 37 84-121 57-93 (412)
92 3ipl_A 2-succinylbenzoate--COA 30.7 15 0.00052 30.8 1.0 10 102-111 168-177 (501)
93 2raf_A Putative dinucleotide-b 30.6 97 0.0033 23.7 5.5 61 70-152 19-79 (209)
94 3a2b_A Serine palmitoyltransfe 30.5 28 0.00097 27.8 2.5 39 82-121 87-125 (398)
95 3e2y_A Kynurenine-oxoglutarate 30.3 31 0.0011 27.4 2.7 22 100-121 86-107 (410)
96 1d2f_A MALY protein; aminotran 30.2 26 0.00089 27.9 2.2 34 88-121 69-109 (390)
97 1v25_A Long-chain-fatty-acid-C 30.1 17 0.00058 31.2 1.2 10 102-111 181-190 (541)
98 1r30_A Biotin synthase; SAM ra 30.1 1.3E+02 0.0045 24.9 6.6 63 57-122 103-168 (369)
99 3r44_A Fatty acyl COA syntheta 29.9 15 0.00051 31.4 0.8 10 102-111 175-184 (517)
100 4fuq_A Malonyl COA synthetase; 29.9 14 0.0005 31.4 0.7 10 102-111 160-169 (503)
101 1m32_A 2-aminoethylphosphonate 29.9 28 0.00094 26.8 2.2 19 102-120 59-77 (366)
102 3ni2_A 4-coumarate:COA ligase; 29.8 16 0.00055 31.3 1.0 10 102-111 183-192 (536)
103 1v72_A Aldolase; PLP-dependent 29.8 33 0.0011 26.4 2.7 17 103-119 63-79 (356)
104 3kbq_A Protein TA0487; structu 29.8 43 0.0015 26.6 3.4 48 58-113 27-76 (172)
105 3ivr_A Putative long-chain-fat 29.7 15 0.0005 31.1 0.7 10 102-111 165-174 (509)
106 2rfv_A Methionine gamma-lyase; 29.7 53 0.0018 26.6 4.0 21 153-173 154-177 (398)
107 3g0t_A Putative aminotransfera 29.5 31 0.001 27.8 2.5 35 86-120 85-126 (437)
108 3nx3_A Acoat, acetylornithine 29.3 47 0.0016 26.5 3.6 40 82-122 77-116 (395)
109 3gtz_A Putative translation in 29.2 11 0.00038 27.9 -0.1 15 98-112 19-33 (124)
110 1iay_A ACC synthase 2, 1-amino 29.1 26 0.00089 28.5 2.1 21 86-106 118-138 (428)
111 3kjj_A NMB1025 protein; YJGF p 29.1 13 0.00045 27.9 0.3 15 98-112 25-39 (128)
112 3ml1_A NAPA, periplasmic nitra 29.0 76 0.0026 30.0 5.5 28 56-83 97-126 (802)
113 1gd9_A Aspartate aminotransfer 29.0 35 0.0012 27.0 2.8 37 85-121 65-109 (389)
114 1c4k_A Protein (ornithine deca 29.0 18 0.00061 34.2 1.2 35 86-120 176-210 (730)
115 1mdb_A 2,3-dihydroxybenzoate-A 28.9 17 0.00059 31.2 1.0 9 103-111 188-196 (539)
116 7aat_A Aspartate aminotransfer 28.9 38 0.0013 27.0 3.0 17 105-121 102-118 (401)
117 3c8f_A Pyruvate formate-lyase 28.8 92 0.0031 23.0 4.9 47 58-107 55-107 (245)
118 3e7w_A D-alanine--poly(phospho 28.8 18 0.00062 30.7 1.1 10 102-111 148-157 (511)
119 1v9v_A KIAA0561 protein; helix 28.6 15 0.00052 29.0 0.6 42 65-106 22-63 (114)
120 3f0h_A Aminotransferase; RER07 28.6 28 0.00097 27.2 2.2 19 155-173 154-172 (376)
121 1t5h_X 4-chlorobenzoyl COA lig 28.6 15 0.00052 31.0 0.6 9 103-111 159-167 (504)
122 3piu_A 1-aminocyclopropane-1-c 28.5 30 0.001 28.2 2.4 23 99-121 111-133 (435)
123 3t5a_A Long-chain-fatty-acid-- 28.4 13 0.00044 30.7 0.1 10 102-111 188-197 (480)
124 3gqw_A Fatty acid AMP ligase; 28.4 15 0.00053 31.0 0.6 10 102-111 181-190 (576)
125 3rq1_A Aminotransferase class 28.4 34 0.0012 27.6 2.6 20 87-106 113-132 (418)
126 2uyy_A N-PAC protein; long-cha 28.2 58 0.002 26.0 4.0 45 56-107 11-60 (316)
127 3qov_A Phenylacetate-coenzyme 28.1 18 0.00063 29.8 1.0 10 102-111 91-100 (436)
128 3ffr_A Phosphoserine aminotran 28.0 25 0.00087 27.0 1.7 36 85-120 45-82 (362)
129 1pg4_A Acetyl-COA synthetase; 27.7 20 0.00067 32.0 1.2 9 103-111 262-270 (652)
130 2f48_A Diphosphate--fructose-6 27.5 25 0.00087 33.0 2.0 19 103-122 77-97 (555)
131 3k12_A Uncharacterized protein 27.4 10 0.00035 28.0 -0.6 16 98-113 16-31 (122)
132 2pju_A Propionate catabolism o 27.4 48 0.0017 27.2 3.4 87 56-156 93-197 (225)
133 3g7s_A Long-chain-fatty-acid-- 27.3 18 0.00062 31.0 0.9 10 102-111 185-194 (549)
134 3ite_A SIDN siderophore synthe 26.9 18 0.00061 31.0 0.8 10 102-111 180-189 (562)
135 3l8c_A D-alanine--poly(phospho 26.9 17 0.00058 30.7 0.6 10 102-111 150-159 (521)
136 2r8w_A AGR_C_1641P; APC7498, d 26.9 2.9E+02 0.01 23.4 11.2 140 39-186 35-194 (332)
137 2r2n_A Kynurenine/alpha-aminoa 26.9 37 0.0013 27.8 2.7 19 101-119 110-128 (425)
138 3nnk_A Ureidoglycine-glyoxylat 26.8 45 0.0015 26.3 3.0 18 103-120 68-85 (411)
139 3dxv_A Alpha-amino-epsilon-cap 26.8 31 0.0011 28.2 2.1 44 83-126 86-131 (439)
140 3dr4_A Putative perosamine syn 26.7 37 0.0013 27.1 2.5 19 155-173 151-169 (391)
141 3rfq_A Pterin-4-alpha-carbinol 26.7 49 0.0017 26.5 3.3 34 80-113 70-103 (185)
142 2okj_A Glutamate decarboxylase 26.6 29 0.00098 29.6 2.0 37 85-121 134-173 (504)
143 1t3i_A Probable cysteine desul 26.5 36 0.0012 26.9 2.4 20 100-119 91-110 (420)
144 2vsq_A Surfactin synthetase su 26.5 21 0.0007 34.8 1.2 9 103-111 613-621 (1304)
145 2bwn_A 5-aminolevulinate synth 26.3 33 0.0011 27.4 2.2 21 153-173 183-206 (401)
146 3ojc_A Putative aspartate/glut 26.3 33 0.0011 27.5 2.2 36 52-87 99-138 (231)
147 3o8o_A 6-phosphofructokinase s 26.2 26 0.00088 34.5 1.8 18 103-121 398-417 (787)
148 1o69_A Aminotransferase; struc 26.1 37 0.0013 27.5 2.5 34 85-119 34-67 (394)
149 3nyt_A Aminotransferase WBPE; 26.0 37 0.0013 27.0 2.4 20 154-173 129-148 (367)
150 1v2d_A Glutamine aminotransfer 25.8 35 0.0012 27.0 2.3 36 85-120 63-99 (381)
151 1y5e_A Molybdenum cofactor bio 25.8 47 0.0016 25.4 2.9 51 58-113 35-86 (169)
152 3rix_A Luciferase, luciferin 4 25.8 17 0.00058 31.2 0.4 10 102-111 195-204 (550)
153 3fce_A D-alanine--poly(phospho 25.7 19 0.00065 30.4 0.7 10 102-111 149-158 (512)
154 3ruy_A Ornithine aminotransfer 25.7 38 0.0013 27.0 2.4 38 83-121 78-115 (392)
155 2y4o_A Phenylacetate-coenzyme 25.7 23 0.00078 29.3 1.2 10 102-111 97-106 (443)
156 3c5e_A Acyl-coenzyme A synthet 25.7 21 0.00072 31.2 1.0 9 103-111 212-220 (570)
157 3fvs_A Kynurenine--oxoglutarat 25.6 48 0.0016 26.6 3.0 23 100-122 92-114 (422)
158 2v7b_A Benzoate-coenzyme A lig 25.6 17 0.00059 30.8 0.4 9 103-111 189-197 (529)
159 2x5f_A Aspartate_tyrosine_phen 25.6 33 0.0011 27.9 2.1 21 86-106 123-143 (430)
160 2nap_A Protein (periplasmic ni 25.5 1.1E+02 0.0039 27.6 5.8 27 56-82 85-113 (723)
161 3p1t_A Putative histidinol-pho 25.4 35 0.0012 26.2 2.2 20 153-172 140-162 (337)
162 3o83_A Peptide arylation enzym 25.4 20 0.00067 30.9 0.7 10 102-111 196-205 (544)
163 3hp4_A GDSL-esterase; psychrot 25.4 1.8E+02 0.006 20.3 5.7 64 70-133 2-75 (185)
164 1ry2_A Acetyl-coenzyme A synth 25.3 23 0.00078 31.9 1.2 9 103-111 268-276 (663)
165 2x5d_A Probable aminotransfera 25.3 38 0.0013 27.4 2.4 22 100-121 100-121 (412)
166 1yiz_A Kynurenine aminotransfe 25.2 30 0.001 28.0 1.8 21 101-121 103-123 (429)
167 3hgu_A EHPF; phenazine, antibi 25.2 21 0.0007 28.8 0.8 10 102-111 96-105 (369)
168 3etc_A AMP-binding protein; ad 25.2 23 0.0008 31.1 1.2 10 102-111 230-239 (580)
169 1mdo_A ARNB aminotransferase; 25.0 38 0.0013 26.8 2.3 20 154-173 133-152 (393)
170 2dou_A Probable N-succinyldiam 25.0 49 0.0017 26.1 2.9 20 101-120 89-108 (376)
171 2zyj_A Alpha-aminodipate amino 24.9 30 0.001 27.7 1.7 36 85-120 76-112 (397)
172 3dtt_A NADP oxidoreductase; st 24.8 50 0.0017 25.9 2.9 32 68-106 17-48 (245)
173 3uwc_A Nucleotide-sugar aminot 24.8 34 0.0012 26.8 2.0 18 156-173 133-150 (374)
174 2o1b_A Aminotransferase, class 24.7 37 0.0013 27.6 2.3 37 85-121 87-131 (404)
175 3bwn_A AT1G70560, L-tryptophan 24.7 52 0.0018 27.0 3.1 22 86-107 101-126 (391)
176 3i4j_A Aminotransferase, class 24.6 88 0.003 25.4 4.5 40 83-122 72-112 (430)
177 1w3i_A EDA, 2-keto-3-deoxy glu 24.5 3E+02 0.01 22.7 11.1 93 44-138 5-104 (293)
178 2y27_A Phenylacetate-coenzyme 24.5 23 0.00078 29.3 1.0 10 102-111 95-104 (437)
179 3b46_A Aminotransferase BNA3; 24.5 30 0.001 28.8 1.6 37 85-121 97-140 (447)
180 3o8l_A 6-phosphofructokinase, 24.4 29 0.00098 34.0 1.8 18 103-121 20-39 (762)
181 2d68_A FOP, FGFR1OP; alpha hel 24.3 12 0.0004 27.6 -0.7 39 128-166 38-76 (82)
182 3dvo_A Sgrair restriction enzy 24.1 1.6E+02 0.0054 26.8 6.4 54 85-155 163-226 (338)
183 3opy_B 6-phosphofructo-1-kinas 24.0 29 0.00099 35.0 1.7 18 103-121 576-595 (941)
184 4gr5_A Non-ribosomal peptide s 24.0 22 0.00075 30.8 0.8 10 102-111 219-228 (570)
185 1ax4_A Tryptophanase; tryptoph 23.9 46 0.0016 27.3 2.6 20 154-173 189-215 (467)
186 3tb6_A Arabinose metabolism tr 23.9 2.3E+02 0.0077 21.1 6.5 32 66-98 133-164 (298)
187 2e7z_A Acetylene hydratase AHY 23.9 1.1E+02 0.0038 27.8 5.4 45 56-106 84-134 (727)
188 1xi9_A Putative transaminase; 23.8 31 0.0011 27.8 1.6 22 100-121 102-123 (406)
189 4d9b_A D-cysteine desulfhydras 23.5 3.2E+02 0.011 22.7 8.2 78 82-160 63-147 (342)
190 1amu_A GRSA, gramicidin synthe 23.5 21 0.00072 31.1 0.6 9 103-111 188-196 (563)
191 1u08_A Hypothetical aminotrans 23.5 43 0.0015 26.6 2.4 21 101-121 93-113 (386)
192 3iwt_A 178AA long hypothetical 23.4 52 0.0018 24.9 2.7 51 58-113 44-95 (178)
193 3cai_A Possible aminotransfera 23.3 58 0.002 25.8 3.1 34 86-119 72-106 (406)
194 2d1s_A Luciferase, luciferin 4 23.3 23 0.0008 30.5 0.8 10 102-111 197-206 (548)
195 3a9z_A Selenocysteine lyase; P 23.2 42 0.0014 27.1 2.3 36 86-121 64-100 (432)
196 2epj_A Glutamate-1-semialdehyd 23.1 58 0.002 26.6 3.1 36 84-119 97-132 (434)
197 1elu_A L-cysteine/L-cystine C- 23.1 40 0.0014 26.3 2.1 34 86-119 62-96 (390)
198 1vp4_A Aminotransferase, putat 23.0 31 0.0011 28.2 1.4 21 100-120 110-130 (425)
199 1b9h_A AHBA synthase, protein 22.9 98 0.0034 24.5 4.3 14 160-173 138-151 (388)
200 3tcm_A Alanine aminotransferas 22.7 58 0.002 28.0 3.2 40 81-120 136-178 (500)
201 2i1o_A Nicotinate phosphoribos 22.7 54 0.0018 29.2 3.0 64 69-138 137-222 (398)
202 1tzj_A ACC deaminase, 1-aminoc 22.5 1E+02 0.0036 25.1 4.6 56 83-138 50-105 (338)
203 3opy_B 6-phosphofructo-1-kinas 22.5 34 0.0012 34.4 1.9 18 103-121 186-205 (941)
204 3m5u_A Phosphoserine aminotran 22.4 40 0.0014 28.7 2.1 20 101-120 70-90 (361)
205 1lc5_A COBD, L-threonine-O-3-p 22.3 54 0.0018 25.9 2.7 19 101-119 78-96 (364)
206 3op7_A Aminotransferase class 22.3 18 0.00061 28.6 -0.1 21 153-173 159-185 (375)
207 3o8o_B 6-phosphofructokinase s 22.3 33 0.0011 33.5 1.8 18 103-121 8-27 (766)
208 3o8o_A 6-phosphofructokinase s 22.2 33 0.0011 33.7 1.8 19 103-122 10-30 (787)
209 3o8o_B 6-phosphofructokinase s 22.2 33 0.0011 33.5 1.8 18 103-121 398-417 (766)
210 2hig_A 6-phospho-1-fructokinas 22.2 37 0.0013 31.6 2.0 19 103-122 102-122 (487)
211 1jlj_A Gephyrin; globular alph 22.1 65 0.0022 25.4 3.1 32 81-112 59-91 (189)
212 3if2_A Aminotransferase; YP_26 22.1 28 0.00096 28.3 1.0 38 85-122 85-129 (444)
213 3rss_A Putative uncharacterize 22.0 57 0.0019 29.7 3.1 37 99-136 244-283 (502)
214 1di6_A MOGA, molybdenum cofact 22.0 60 0.0021 25.9 3.0 32 81-112 47-79 (195)
215 2o0r_A RV0858C (N-succinyldiam 22.0 35 0.0012 27.5 1.6 21 101-121 88-108 (411)
216 2q7w_A Aspartate aminotransfer 21.8 70 0.0024 25.2 3.3 16 105-120 100-115 (396)
217 1fg7_A Histidinol phosphate am 21.8 41 0.0014 26.8 1.9 43 58-106 63-106 (356)
218 3ktd_A Prephenate dehydrogenas 21.8 2.3E+02 0.0078 24.2 6.7 69 70-153 8-91 (341)
219 2pjk_A 178AA long hypothetical 21.7 58 0.002 25.4 2.7 51 58-113 44-95 (178)
220 2oqx_A Tryptophanase; lyase, p 21.6 94 0.0032 25.4 4.1 35 87-122 78-112 (467)
221 3vp6_A Glutamate decarboxylase 21.6 43 0.0015 29.1 2.1 39 84-122 136-177 (511)
222 3l44_A Glutamate-1-semialdehyd 21.5 1.7E+02 0.0059 23.7 5.6 39 84-122 96-134 (434)
223 3qhx_A Cystathionine gamma-syn 21.5 54 0.0018 27.0 2.7 99 58-173 71-179 (392)
224 2rkb_A Serine dehydratase-like 21.5 1.9E+02 0.0063 23.6 5.8 62 83-149 37-98 (318)
225 4adb_A Succinylornithine trans 21.4 51 0.0017 26.1 2.4 37 84-121 82-118 (406)
226 2nuw_A 2-keto-3-deoxygluconate 21.4 3.4E+02 0.012 22.3 10.1 125 44-170 5-147 (288)
227 1lld_A L-lactate dehydrogenase 21.4 58 0.002 26.0 2.8 26 69-101 6-31 (319)
228 3opy_A 6-phosphofructo-1-kinas 21.3 37 0.0013 34.5 1.9 20 102-122 214-235 (989)
229 4gbj_A 6-phosphogluconate dehy 21.3 74 0.0025 26.1 3.4 29 70-105 5-33 (297)
230 3o8l_A 6-phosphofructokinase, 21.3 36 0.0012 33.3 1.8 19 103-122 405-425 (762)
231 2gb3_A Aspartate aminotransfer 21.2 38 0.0013 27.4 1.6 21 100-120 103-123 (409)
232 1bw0_A TAT, protein (tyrosine 21.2 47 0.0016 26.6 2.2 22 99-120 104-125 (416)
233 3tfu_A Adenosylmethionine-8-am 21.1 1.6E+02 0.0053 25.0 5.5 38 84-121 119-157 (457)
234 3n75_A LDC, lysine decarboxyla 21.0 36 0.0012 32.4 1.7 38 85-122 197-234 (715)
235 1o4s_A Aspartate aminotransfer 21.0 39 0.0013 27.1 1.6 21 100-120 102-122 (389)
236 3l8a_A METC, putative aminotra 21.0 57 0.002 26.6 2.6 22 100-121 120-141 (421)
237 3r0p_A L-PSP putative endoribo 21.0 19 0.00066 26.3 -0.2 16 98-113 24-39 (127)
238 2fyf_A PSAT, phosphoserine ami 20.9 31 0.0011 27.8 1.1 37 85-121 80-119 (398)
239 1sn9_A BBAT, tetrameric beta-B 20.9 55 0.0019 20.0 1.9 16 52-67 3-18 (26)
240 3l7q_A Putative translation in 20.9 20 0.00067 26.3 -0.1 16 97-112 20-35 (125)
241 4e1o_A HDC, histidine decarbox 20.8 50 0.0017 28.2 2.4 41 81-121 116-167 (481)
242 2i14_A Nicotinate-nucleotide p 20.6 78 0.0027 28.0 3.6 77 57-138 113-219 (395)
243 1utr_A Uteroglobin; clara cell 20.5 34 0.0012 24.9 1.1 31 134-175 64-94 (96)
244 1jg8_A L-ALLO-threonine aldola 20.2 62 0.0021 25.0 2.6 51 50-108 34-85 (347)
245 3obk_A Delta-aminolevulinic ac 20.2 86 0.0029 28.7 3.9 31 48-78 59-95 (356)
246 1qu9_A YJGF protein; structura 20.1 30 0.001 25.3 0.8 15 98-112 22-36 (128)
247 4dll_A 2-hydroxy-3-oxopropiona 20.0 94 0.0032 25.4 3.8 33 67-106 28-60 (320)
248 2cwj_A Putative endonuclease; 20.0 17 0.00059 26.5 -0.6 16 98-113 16-31 (123)
No 1
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=97.94 E-value=0.00014 Score=65.64 Aligned_cols=133 Identities=21% Similarity=0.161 Sum_probs=104.5
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccCC-ChhHHHHHH
Q 028143 70 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQ-PPESQELLA 148 (213)
Q Consensus 70 ~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~kQ-p~EsrelLe 148 (213)
.+.|||.|||++.---.+..+-+++.|+..|-.|++-+|-|+-+|+-||||.+ . --.||+-.+++- |++.+++.+
T Consensus 127 ~~~vAIVGsR~~s~yG~~~a~~l~~~La~~g~~VVSGlA~GID~~AH~~AL~~-g---TIaVLg~Gld~~YP~~n~~L~~ 202 (382)
T 3maj_A 127 RPMIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSS-G---TVAVLAGGHDKIYPAEHEDLLL 202 (382)
T ss_dssp SCEEEEECCSSCCHHHHHHHHHHHHHHHHHTCEEEECCCTTHHHHHHHHHTTT-C---EEEECSSCTTSCSSGGGHHHHH
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHHHHHHCCcEEEeCCccCHHHHHHHHHHhC-C---eEEEECCCcCccCCHhhHHHHH
Confidence 56899999999999999999999999999988888778999999999999997 3 445899999985 889999999
Q ss_pred Hhhh-----HhcCCCCCCCChHHHHhhhhHHHHhhhceeeeE-eeeCchHHHHHHHHHhhccCeeE
Q 028143 149 KVKT-----VIEKPHNDHLPLIEASRLCNMDIISHVQQVICF-AFHDSRLLMETCQEAKNLRKIVT 208 (213)
Q Consensus 149 ~V~~-----lvE~penD~LpL~eAS~lCN~eIisr~qQlIcF-AFHDS~tLl~tc~eAe~~~KvVT 208 (213)
++.. +=|-|-+.. |...---.-|+=|..-++=+|.. |-..|-+ |-|++.|-+++|-|-
T Consensus 203 ~I~~~~G~liSE~ppg~~-p~~~~Fp~RNRiIagLS~~vvVvEA~~kSGs-liTA~~Ale~gR~Vf 266 (382)
T 3maj_A 203 DIIQTRGAAISEMPLGHV-PRGKDFPRRNRLISGASVGVAVIEAAYRSGS-LITARRAADQGREVF 266 (382)
T ss_dssp HHHHTTCEEEECSCTTCC-CCTTHHHHHHHHHHHHCSCEEECCCCTTCTH-HHHHHHHHHHTCCEE
T ss_pred HHHHhCCcEEecCCCCCC-CCccccHHHHHHHHHhCCceEEEecCCCCcH-HHHHHHHHHhCCcEE
Confidence 9843 235454432 33332335677777778877765 4556777 568999999998774
No 2
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=97.57 E-value=0.00021 Score=57.65 Aligned_cols=123 Identities=15% Similarity=0.106 Sum_probs=81.5
Q ss_pred CCceEEEecccc--cchhHHHHHHHHHHHHHHhcCceeecCC-CCchHHHHHhhhhhcCCCceeEeecccccCCChhHHH
Q 028143 69 GPRAIGFFGTRN--MGFMHQELIEILSYALVITKNHIYTSGA-SGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQE 145 (213)
Q Consensus 69 g~rria~lGsRh--v~~~hq~LIEllsyAlvl~gn~i~TSGA-~GtNaAvIRGalrae~p~lLTViLPQSL~kQp~Esre 145 (213)
..++||++|||+ ..=-..+..+-+.+.|+..|..|+|-|+ .|.=.|+-|||+.+ .-.- .=|||+. +++.+..-
T Consensus 12 ~~~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGGg~~Gim~aa~~gAl~~-gG~t-igVlP~~-~~~~~~~~- 87 (176)
T 2iz6_A 12 RKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEA-GGTT-IGVLPGP-DTSEISDA- 87 (176)
T ss_dssp CCCEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHT-TCCE-EEEECC------CCTT-
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHhHHHHHHHHHc-CCEE-EEEeCch-hhhhhccC-
Confidence 457899999999 6666788999999999999999999999 99999999999998 4333 3357876 33222110
Q ss_pred HHHHhhhHhcCCCCCCCChHHHHhhhhHHHHhhhceeeeEeeeCchHHHHHHHHHhhccCeeEEe
Q 028143 146 LLAKVKTVIEKPHNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLF 210 (213)
Q Consensus 146 lLe~V~~lvE~penD~LpL~eAS~lCN~eIisr~qQlIcFAFHDS~tLl~tc~eAe~~~KvVTLf 210 (213)
+..++ .-++++ -=|+-|+..+|=+|.+-= -+-||-|.. +|-.++|-|-++
T Consensus 88 ----~~~~i---~~~~~~------~Rk~~m~~~sda~IvlpG-g~GTL~E~~-~al~~~kpV~~l 137 (176)
T 2iz6_A 88 ----VDIPI---VTGLGS------ARDNINALSSNVLVAVGM-GPGTAAEVA-LALKAKKPVVLL 137 (176)
T ss_dssp ----CSEEE---ECCCCS------SSCCCCGGGCSEEEEESC-CHHHHHHHH-HHHHTTCCEEEE
T ss_pred ----CceeE---EcCCHH------HHHHHHHHhCCEEEEecC-CccHHHHHH-HHHHhCCcEEEE
Confidence 00000 011121 125667777887787753 366765554 555777777654
No 3
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=97.42 E-value=0.0024 Score=51.26 Aligned_cols=140 Identities=14% Similarity=0.067 Sum_probs=89.2
Q ss_pred ceEEEecccccch------------hHHHHHHHHHHHHHHhc-CceeecCCCCchHHHHHhhhhh--cCC-CceeEeecc
Q 028143 71 RAIGFFGTRNMGF------------MHQELIEILSYALVITK-NHIYTSGASGTNAAVIRGALRA--ERP-DLLTVILPQ 134 (213)
Q Consensus 71 rria~lGsRhv~~------------~hq~LIEllsyAlvl~g-n~i~TSGA~GtNaAvIRGalra--e~p-~lLTViLPQ 134 (213)
++|||-|-|..++ +-..|-+.|...+ -.| -+++|+||.|+=..+..-|+.. +-| =.|+|++|=
T Consensus 3 ~~i~vTGhR~~~l~if~~~~~~~~~ik~~L~~~l~~l~-~~G~~~~isgga~G~D~~aae~vl~lk~~y~~i~L~~v~Pf 81 (181)
T 2nx2_A 3 KVLAITGYKPFELGIFKQDDKALYYIKKAIKNRLIAFL-DEGLEWILISGQLGVELWAAEAAYDLQEEYPDLKVAVITPF 81 (181)
T ss_dssp CEEEEEECCHHHHTCCSSCCHHHHHHHHHHHHHHHHHH-TTTCCEEEECCCTTHHHHHHHHHHTTTTTCTTCEEEEEESS
T ss_pred eEEEEEeCCCccccCccccchHHHHHHHHHHHHHHHHH-hCCCcEEEECCCccHHHHHHHHHHHhccccCCceEEEEecc
Confidence 6999999999874 2333333333333 245 6999999999999998888773 346 468999993
Q ss_pred ccc--CCChhHHHHHHHhhhHhc----CCCCCCCChHHHHhhhhHHHHhhhceeeeEee-eCchHHHHHHHHHhhc----
Q 028143 135 SLK--KQPPESQELLAKVKTVIE----KPHNDHLPLIEASRLCNMDIISHVQQVICFAF-HDSRLLMETCQEAKNL---- 203 (213)
Q Consensus 135 SL~--kQp~EsrelLe~V~~lvE----~penD~LpL~eAS~lCN~eIisr~qQlIcFAF-HDS~tLl~tc~eAe~~---- 203 (213)
.=- +=+++.|+.+..++.-.. -++. +..=+.+-+.=|+-++.+||-+|+|-- +-+----.+.+.|+++
T Consensus 82 ~~~~~~w~~~~~~~y~~ll~~aD~v~~l~~~-~y~~~~~~~~rn~~mvd~sD~liavyDg~~~GgT~~~v~~A~~~~~~~ 160 (181)
T 2nx2_A 82 YEQEKNWKEPNKEQYEAVLAQADYEASLTHR-PYESPLQFKQKNQFFIDKSDGLLLLYDPEKEGSPKYMLGTAEKRREQD 160 (181)
T ss_dssp BCTTTTSCHHHHHHHHHHHHHCSEEEESSSS-BCCCHHHHHHHHHHHHHHSSEEEEECCTTTCCTTHHHHHHHHHHHHHH
T ss_pred cchhhCCCHHHHHHHHHHHHhCCeEEecccC-CCCCHHHHHHHHHHHHHHCCEEEEEEcCCCCCCHHHHHHHHHHhcccc
Confidence 322 236788887776655422 2222 111245666779999999999998853 1111233444555554
Q ss_pred cCeeEEeec
Q 028143 204 RKIVTLFYL 212 (213)
Q Consensus 204 ~KvVTLfy~ 212 (213)
++-|.++-+
T Consensus 161 ~~pv~~I~~ 169 (181)
T 2nx2_A 161 GYPIYFITM 169 (181)
T ss_dssp CCCEEEECH
T ss_pred CCeEEEEcH
Confidence 577777654
No 4
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=97.38 E-value=0.0031 Score=55.10 Aligned_cols=133 Identities=21% Similarity=0.180 Sum_probs=97.4
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHHhcCceeecC-CCCchHHHHHhhhhhcCCCceeEeecccccC-CChhHHHHH
Q 028143 70 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG-ASGTNAAVIRGALRAERPDLLTVILPQSLKK-QPPESQELL 147 (213)
Q Consensus 70 ~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSG-A~GtNaAvIRGalrae~p~lLTViLPQSL~k-Qp~EsrelL 147 (213)
.+.|||.|||+..---.+..+-++..|+ .| ..++|| |-|+-+++-||||.+..+ --.||+..|++ -|++.+++.
T Consensus 106 ~~~vaIVGsR~~s~yg~~~a~~l~~~La-~~-~~VVSGlA~GID~~AH~~aL~~~g~--TIaVl~~Gld~~YP~~n~~L~ 181 (288)
T 3uqz_A 106 FPKVAVVGSRACSKQGAKSVEKVIQGLE-NE-LVIVSGLAKGIDTAAHMAALQNGGK--TIAVIGTGLDVFYPKANKRLQ 181 (288)
T ss_dssp SCEEEEEECTTCCHHHHHHHHHHHHTTT-TC-SEEEECCCTTHHHHHHHHHHHHTCC--EEEECSSCTTCCSSGGGHHHH
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHHHh-hh-heEecCcccCHHHHHHHHHHhcCCC--EEEEecccccccCchhhHHHH
Confidence 4689999999999999999999999885 44 667777 689999999999998433 23479999987 477888887
Q ss_pred HHhhh----HhcCCCCCCCChHHHHhhhhHHHHhhhceeeeE-eeeCchHHHHHHHHHhhccCeeE
Q 028143 148 AKVKT----VIEKPHNDHLPLIEASRLCNMDIISHVQQVICF-AFHDSRLLMETCQEAKNLRKIVT 208 (213)
Q Consensus 148 e~V~~----lvE~penD~LpL~eAS~lCN~eIisr~qQlIcF-AFHDS~tLl~tc~eAe~~~KvVT 208 (213)
+++.+ +=|-|-+.. |...---.=|+=|-.-++=+|-. |-..|-+| -|++.|-+++|-|-
T Consensus 182 ~~i~~~GlliSE~ppg~~-p~~~~Fp~RNRiIagLS~~~vVvEA~~~SGsl-iTA~~Ale~gR~Vf 245 (288)
T 3uqz_A 182 DYIGNDHLVLSEYGPGEQ-PLKFHFPARNRIIAGLCRGVIVAEAKMRSGSL-ITCERAMEEGRDVF 245 (288)
T ss_dssp HHHHHHSEEEESSCTTCC-CCTTHHHHHHHHHHHHCSEEEEESCCTTCHHH-HHHHHHHHTTCEEE
T ss_pred HHhcccCcEeeccCCCCC-ccccccHHHHHHHHHcCCeEEEEecCCCChHH-HHHHHHHHcCCeEE
Confidence 77654 345554432 33333333467677777776655 44556665 69999999999764
No 5
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=97.26 E-value=0.00045 Score=57.09 Aligned_cols=114 Identities=20% Similarity=0.161 Sum_probs=73.2
Q ss_pred cCCceEEEe-cccccch-hHHHHHHHHHHHHHHhcCceeecCCC-CchHHHHHhhhhhcCCCceeEeecccccCCChhHH
Q 028143 68 QGPRAIGFF-GTRNMGF-MHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQ 144 (213)
Q Consensus 68 ~g~rria~l-GsRhv~~-~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~p~lLTViLPQSL~kQp~Esr 144 (213)
..-++||++ |||+..= -..+..+-+.+.|+..|..|+|-||. |.=.|+-|||+.+. -.- .=|||..+... |..
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~~GiM~aa~~gAl~~G-G~t-iGVlP~~~~~~--e~~ 86 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG-RHV-IGIIPKTLMPR--ELT 86 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTT-CCE-EEEEESSCC-------
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCChhhHhHHHHHHHHHcC-CcE-EEEcchHhcch--hhc
Confidence 345679999 9999643 35778899999999999999999996 99999999999983 333 33479887541 110
Q ss_pred HHHHHhhhHhcCCCCCCCChHHHHhhhhHHHHhhhceeeeEeeeCchHHHHHH
Q 028143 145 ELLAKVKTVIEKPHNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETC 197 (213)
Q Consensus 145 elLe~V~~lvE~penD~LpL~eAS~lCN~eIisr~qQlIcFAFHDS~tLl~tc 197 (213)
.+ .+.+.|.-+++ .-=|.-|+..+|=+|++-= -.=||-|-.
T Consensus 87 ---~~--~~~~~~~~~~f------~~Rk~~~~~~sda~VvlpG-G~GTLdElf 127 (215)
T 2a33_A 87 ---GE--TVGEVRAVADM------HQRKAEMAKHSDAFIALPG-GYGTLEELL 127 (215)
T ss_dssp --------CCEEEEESSH------HHHHHHHHHTCSEEEECSC-CHHHHHHHH
T ss_pred ---cC--CCCceeecCCH------HHHHHHHHHhCCEEEEeCC-CCchHHHHH
Confidence 00 01122222222 1236667778887777642 244554444
No 6
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=97.23 E-value=0.0021 Score=52.67 Aligned_cols=119 Identities=16% Similarity=0.172 Sum_probs=82.9
Q ss_pred CceEEEeccccc-ch----hHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChhHH
Q 028143 70 PRAIGFFGTRNM-GF----MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQ 144 (213)
Q Consensus 70 ~rria~lGsRhv-~~----~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~kQp~Esr 144 (213)
.++||++|+|+. .= -..+..+-+.+.|+..|..|+|-|+.|.=.|+-|||+.+ .-. ..-|||. ++.+
T Consensus 23 m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVsGg~~GiM~aa~~gAl~~-GG~-~iGVlP~--e~~~---- 94 (195)
T 1rcu_A 23 MKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFNGGRDGVMELVSQGVREA-GGT-VVGILPD--EEAG---- 94 (195)
T ss_dssp CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEECCSSHHHHHHHHHHHHT-TCC-EEEEEST--TCCC----
T ss_pred CCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHHHc-CCc-EEEEeCC--cccC----
Confidence 468999999875 22 566888999999999999999999999999999999998 333 3445787 2111
Q ss_pred HHHHHhhhHhcCCCCCCCChH--HHHhhhhHHHHhhhceeeeEeeeCchHHHHHHHHHhhccCeeEEe
Q 028143 145 ELLAKVKTVIEKPHNDHLPLI--EASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLF 210 (213)
Q Consensus 145 elLe~V~~lvE~penD~LpL~--eAS~lCN~eIisr~qQlIcFAFHDS~tLl~tc~eAe~~~KvVTLf 210 (213)
++. .++++. .--..=|.-|+..+|=+|.+-= -+-||-|.. +|-.++|-|-++
T Consensus 95 -----------~~~-~~~~~~~~~~f~~Rk~~m~~~sda~IvlpG-G~GTL~E~~-eal~~~kPV~ll 148 (195)
T 1rcu_A 95 -----------NPY-LSVAVKTGLDFQMRSFVLLRNADVVVSIGG-EIGTAIEIL-GAYALGKPVILL 148 (195)
T ss_dssp -----------CTT-CSEEEECCCCHHHHHHHHHTTCSEEEEESC-CHHHHHHHH-HHHHTTCCEEEE
T ss_pred -----------CCC-cceeeecCCCHHHHHHHHHHhCCEEEEecC-CCcHHHHHH-HHHhcCCCEEEE
Confidence 111 233322 1111237888899998888863 367766554 555577777766
No 7
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=97.23 E-value=0.001 Score=54.84 Aligned_cols=68 Identities=13% Similarity=0.131 Sum_probs=56.2
Q ss_pred cCCceEEEe-cccccchhHHHHHHHHHHHHHHhcCceeecCCC-CchHHHHHhhhhhcCCCceeEeeccccc
Q 028143 68 QGPRAIGFF-GTRNMGFMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLK 137 (213)
Q Consensus 68 ~g~rria~l-GsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~p~lLTViLPQSL~ 137 (213)
.+.++||++ |||...--+.+..+-+.+.|+..|..|+|-|+. |.=.|+-|||+++. -...-|+|+.|.
T Consensus 20 ~~~~~v~Vfggs~~~~~~~~~~A~~lg~~La~~g~~lV~GGG~~GlM~a~~~gA~~~G--G~viGv~p~~l~ 89 (199)
T 3qua_A 20 DRQWAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSGGGNVSAMGAVAQAARAKG--GHTVGVIPKALV 89 (199)
T ss_dssp -CCCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHHTT--CCEEEEEEGGGT
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcC--CcEEEEeCchhh
Confidence 567899999 578666677788899999999999999999986 99999999999883 344557898874
No 8
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=97.20 E-value=0.00055 Score=54.23 Aligned_cols=63 Identities=13% Similarity=0.037 Sum_probs=53.6
Q ss_pred ceEEEecccccch--hHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhhcCCCceeEeeccc
Q 028143 71 RAIGFFGTRNMGF--MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQS 135 (213)
Q Consensus 71 rria~lGsRhv~~--~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQS 135 (213)
|+||++|||+.+- -+.+..+-+.+.|+..|..|+|=|+.|.=.|+-|||+.+.. . ..=|+|..
T Consensus 2 ~~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg~GiM~aa~~gAl~~gG-~-tiGV~~~~ 66 (171)
T 1weh_A 2 RLLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGYQGGMEALARGVKAKGG-L-VVGVTAPA 66 (171)
T ss_dssp EEEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCSSTHHHHHHHHHHHTTC-C-EEECCCGG
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChhhHHHHHHHHHHHcCC-c-EEEEeccc
Confidence 5799999999987 67889999999999999999999999999999999999833 2 33345653
No 9
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=97.19 E-value=0.00096 Score=53.80 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=75.2
Q ss_pred ceEEEecccccc--hhHHHHHHHHHHHHHHhcCceeecCCC-CchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHH
Q 028143 71 RAIGFFGTRNMG--FMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELL 147 (213)
Q Consensus 71 rria~lGsRhv~--~~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~p~lLTViLPQSL~kQp~EsrelL 147 (213)
|+||++|||+.+ =-+.+..+-+.+.|+..|..|+|-||. |.=.|+-|||+.+. - ...=|+|..|... +
T Consensus 2 ~~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GGg~~GiM~aa~~gA~~~g-G-~~iGv~p~~l~~~-----e-- 72 (191)
T 1t35_A 2 KTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENG-G-TAIGVMPSGLFSG-----E-- 72 (191)
T ss_dssp CEEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHTTT-C-CEEEEEETTCCHH-----H--
T ss_pred CEEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECCCcccHHHHHHHHHHHcC-C-eEEEEeCchhccc-----c--
Confidence 679999999974 456778899999999999999999997 99999999999983 2 3444678887621 1
Q ss_pred HHhhhHhcCCCCCCCChHHHHhhhhHHHHhhhceeeeEeeeCchHHHHHHHHH
Q 028143 148 AKVKTVIEKPHNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEA 200 (213)
Q Consensus 148 e~V~~lvE~penD~LpL~eAS~lCN~eIisr~qQlIcFAFHDS~tLl~tc~eA 200 (213)
..++.-+.+....--..=|.-++..+|=+|++-= -.=||-|-.+..
T Consensus 73 ------~~~~~~~~~~~~~~~~~Rk~~~~~~sda~IvlPG-G~GTl~El~e~l 118 (191)
T 1t35_A 73 ------VVHQNLTELIEVNGMHERKAKMSELADGFISMPG-GFGTYEELFEVL 118 (191)
T ss_dssp ------HTTCCCSEEEEESHHHHHHHHHHHHCSEEEECSC-CHHHHHHHHHHH
T ss_pred ------cccCCCCccccCCCHHHHHHHHHHHCCEEEEeCC-CccHHHHHHHHH
Confidence 0111111111111111226677778887776642 245655555444
No 10
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=97.12 E-value=0.0015 Score=54.12 Aligned_cols=117 Identities=19% Similarity=0.106 Sum_probs=78.0
Q ss_pred HHhcCCceEEEecccccch--hHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChh
Q 028143 65 IQQQGPRAIGFFGTRNMGF--MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPE 142 (213)
Q Consensus 65 IQq~g~rria~lGsRhv~~--~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~kQp~E 142 (213)
+..-|.+.||++|||+.+- -+.+..+-+.+.|+..|..|+|-||.|.=.|+-|||+.+ .-.-.-|+ |. + |.+
T Consensus 32 l~~~~~~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGGg~GiM~aa~~gAl~~-gG~~iGV~-~~-~---P~~ 105 (217)
T 1wek_A 32 LSELQVPLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGGGPGVMEAVNRGAYEA-GGVSVGLN-IE-L---PHE 105 (217)
T ss_dssp HHHCCSCEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECSCSHHHHHHHHHHHHT-TCCEEEEE-EC-C---TTC
T ss_pred HhhcCCCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChhhHHHHHHHHHHHc-CCCEEEEe-eC-C---cch
Confidence 4455546899999999986 567899999999999999999999999999999999998 33333332 32 1 221
Q ss_pred HHHHHHHhhhHhcCCCCCCCChH---HHHhhhhHHHHhhhceeeeEeeeCchHHHHHHHHHh
Q 028143 143 SQELLAKVKTVIEKPHNDHLPLI---EASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAK 201 (213)
Q Consensus 143 srelLe~V~~lvE~penD~LpL~---eAS~lCN~eIisr~qQlIcFAFHDS~tLl~tc~eAe 201 (213)
...|..++.. .--.-=|.-++..+|=+|.+- =-+-||-|......
T Consensus 106 -------------~~~~~~~t~~~~~~~f~~Rk~~m~~~sda~Ivlp-GG~GTL~El~e~lt 153 (217)
T 1wek_A 106 -------------QKPNPYQTHALSLRYFFVRKVLFVRYAVGFVFLP-GGFGTLDELSEVLV 153 (217)
T ss_dssp -------------CCCCSCCSEEEEESCHHHHHHHHHHTEEEEEECS-CCHHHHHHHHHHHH
T ss_pred -------------hhccccCCcCcccCCHHHHHHHHHHhCCEEEEeC-CCCcHHHHHHHHHH
Confidence 1122222211 001122666778888777765 34566666554443
No 11
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=96.64 E-value=0.0049 Score=51.07 Aligned_cols=124 Identities=18% Similarity=0.156 Sum_probs=77.2
Q ss_pred CCceEEEe-cccccc-hhHHHHHHHHHHHHHHhcCceeecCCC-CchHHHHHhhhhhcCCCceeEeecccccCCChhHHH
Q 028143 69 GPRAIGFF-GTRNMG-FMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQE 145 (213)
Q Consensus 69 g~rria~l-GsRhv~-~~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~p~lLTViLPQSL~kQp~Esre 145 (213)
.-++||++ |||..+ =-+.+.-+-+.+.|+..|..|+|-|+. |.=.|+-|||+.+.. ...=|+|..+..
T Consensus 8 ~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~GlM~aa~~gA~~~GG--~~iGv~p~~l~~------- 78 (216)
T 1ydh_A 8 RFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGL--HVLGIIPKALMP------- 78 (216)
T ss_dssp SCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTC--CEEEEEEGGGHH-------
T ss_pred CCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCcccHhHHHHHHHHHcCC--cEEEEechhcCc-------
Confidence 34679999 678753 456778888999999999999999997 999999999999833 344456765421
Q ss_pred HHHHhhhHhcCCCCCC--CChHHHHhhhhHHHHhhhceeeeEeeeCchHHHHHHHHH-----hhccCeeEEe
Q 028143 146 LLAKVKTVIEKPHNDH--LPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEA-----KNLRKIVTLF 210 (213)
Q Consensus 146 lLe~V~~lvE~penD~--LpL~eAS~lCN~eIisr~qQlIcFAFHDS~tLl~tc~eA-----e~~~KvVTLf 210 (213)
.|.+.|.. ++...--..=|.-++.++|=+|+|-= -.=||-|-.+.. ...+|-|-|+
T Consensus 79 --------~e~~~~~~~~~~~~~~~~~Rk~~~~~~sda~I~lpG-G~GTLdElfE~lt~~qlg~~~kPvvll 141 (216)
T 1ydh_A 79 --------IEISGETVGDVRVVADMHERKAAMAQEAEAFIALPG-GYGTMEELLEMITWSQLGIHKKTVGLL 141 (216)
T ss_dssp --------HHCCSSCCSEEEEESSHHHHHHHHHHHCSEEEECSC-SHHHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred --------cccccCCCCcccccCCHHHHHHHHHHhCCEEEEeCC-CccHHHHHHHHHHHHHhcccCCCEEEe
Confidence 12233321 11111012336677788887777642 134444433221 1245555554
No 12
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=96.63 E-value=0.007 Score=49.49 Aligned_cols=69 Identities=14% Similarity=0.106 Sum_probs=53.3
Q ss_pred hcCCceEEEecc-cccchhHHHHHHHHHHHHHHhcCceeecCCC-CchHHHHHhhhhhcCCCceeEeeccccc
Q 028143 67 QQGPRAIGFFGT-RNMGFMHQELIEILSYALVITKNHIYTSGAS-GTNAAVIRGALRAERPDLLTVILPQSLK 137 (213)
Q Consensus 67 q~g~rria~lGs-Rhv~~~hq~LIEllsyAlvl~gn~i~TSGA~-GtNaAvIRGalrae~p~lLTViLPQSL~ 137 (213)
..|.++||++|+ |...=-+.+.-+-+.+.|+..|+.|+|-|+. |.=.||-|||+.+. - ...=|+|+.|.
T Consensus 10 ~~~~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~GGG~~GlM~a~~~ga~~~G-G-~viGv~p~~l~ 80 (189)
T 3sbx_A 10 EPGRWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAARAHG-G-WTVGVIPKMLV 80 (189)
T ss_dssp ---CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHTTT-C-CEEEEEETTTT
T ss_pred CCCCeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcC-C-cEEEEcCchhh
Confidence 467799999985 5344455678888999999999999999987 99999999999883 2 34456788774
No 13
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=93.95 E-value=0.18 Score=47.19 Aligned_cols=69 Identities=14% Similarity=0.202 Sum_probs=55.4
Q ss_pred hcCCceEEEecccccchhHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhhc------CCCceeEeecccc
Q 028143 67 QQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAE------RPDLLTVILPQSL 136 (213)
Q Consensus 67 q~g~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae------~p~lLTViLPQSL 136 (213)
...++.+.++||....=-+-+.-+-+.++|+..|..|+|-|+.|.=-|+.|||..+. .-..+- |+|+.|
T Consensus 144 ~r~~~IvV~cGSs~~~p~yye~A~eLGr~LA~~G~~LVtGGG~GLMeAa~aGA~~a~a~qr~aGG~vIG-IiP~~L 218 (462)
T 3gh1_A 144 GATPNLVVCWGGHSINEVEYQYTREVGHELGLRELNICTGCGPGAMEGPMKGAAVGHAKQRYSEYRYLG-LTEPSI 218 (462)
T ss_dssp TCCSCEEEEECCSSCCHHHHHHHHHHHHHHHHTTCEEEECCSSGGGTHHHHHHHHHHHHTTCTTCCEEE-EECTTT
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcHHHHHHHHHHHHHhccccccCCCeEEE-Eccchh
Confidence 356666679999887778888899999999999999999999999999999998873 233344 456664
No 14
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=93.23 E-value=0.32 Score=45.44 Aligned_cols=69 Identities=14% Similarity=0.240 Sum_probs=52.4
Q ss_pred cCCceEEEecccccchhHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhh------cCCCceeEeeccccc
Q 028143 68 QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA------ERPDLLTVILPQSLK 137 (213)
Q Consensus 68 ~g~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalra------e~p~lLTViLPQSL~ 137 (213)
..++.++|+||....=-.-+..+-+.+.|+..|..|+|-|+.|.=-|+++||..+ ..-..+= |+|+.|.
T Consensus 143 ~~~~ivVv~GSs~~~~~~Ye~A~eLGr~LA~~G~~LVtGGG~GlMEaa~aGA~~a~s~qr~~GG~vIG-IiP~~L~ 217 (460)
T 3bq9_A 143 EEPNMVVCWGGHSINEIEYKYTKDVGYHIGLRGLNICTGCGPGAMKGPMKGATIGHAKQRVEGGRYLG-LTEPGII 217 (460)
T ss_dssp CCSCEEEEECCSSCCHHHHHHHHHHHHHHHHTTCEEEECCSSGGGTHHHHHHHHHHHHTTCSSCCEEE-EECTTTT
T ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHHHHCCCEEEeCCcHHHhhHHHhhHHhhcccccCCCCEEEE-EeChhhh
Confidence 4456788999977654445788889999999999999999999998889999877 2333333 4576653
No 15
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=67.11 E-value=17 Score=29.92 Aligned_cols=77 Identities=17% Similarity=0.025 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHHHHh-hhHhcCCCCCC
Q 028143 83 FMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAKV-KTVIEKPHNDH 161 (213)
Q Consensus 83 ~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~kQp~EsrelLe~V-~~lvE~penD~ 161 (213)
+--..+.-++..|....-.+|+|+|++.-|.+.-=.+.-+..-=-.+|++|... +|++-.++++.. .+|+.-|.+..
T Consensus 53 ~K~R~~~~~i~~a~~~G~~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~--~~~~k~~~~~~~GA~v~~~~~~~~ 130 (325)
T 1j0a_A 53 NKIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKE--ELKGNYLLDKIMGIETRVYDAKDS 130 (325)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCTTCHHHHHHHHHHHHTTCEEEEEEESCC--CSCHHHHHHHHTTCEEEEESCCST
T ss_pred hHHHHHHHHHHHHHHcCCCEEEEcCCcchHHHHHHHHHHHHhCCcEEEEECCCC--CCCchHHHHHHCCCEEEEeCcchh
Confidence 344556667788887766789999865555543333333324445789999987 566777666643 23444454443
No 16
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=65.74 E-value=8 Score=32.63 Aligned_cols=48 Identities=17% Similarity=0.179 Sum_probs=33.4
Q ss_pred CCceEEEecccccchhHHHHHHHHHHHHHHhcCceee---cCCCCchHHHHHhhhhh
Q 028143 69 GPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYT---SGASGTNAAVIRGALRA 122 (213)
Q Consensus 69 g~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~T---SGA~GtNaAvIRGalra 122 (213)
.+++|-|+|||.-. |.+|+-.+ ..+|.+-++ -|++=||-..|+..++.
T Consensus 63 ~~~~iLfVgTk~~~---~~~V~~~A---~~~g~~yv~~rWlgG~LTN~~ti~~~i~~ 113 (231)
T 3bbn_B 63 RGKQFLIVGTKNKA---ADSVARAA---IRARCHYVNKKWLGGMLTNWSTTETRLHK 113 (231)
T ss_dssp TTCCEEEECCCTTT---HHHHHHHH---HHHTCEECCSSCCSCSSSCHHHHHHHHHH
T ss_pred CCCEEEEEeCcHHH---HHHHHHHH---HHhCCccccccccCCCCcCHHHHHHHHHH
Confidence 56799999999853 56654433 344555444 38999999999876554
No 17
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=64.46 E-value=6.2 Score=30.52 Aligned_cols=40 Identities=15% Similarity=0.235 Sum_probs=36.0
Q ss_pred hhHHHHhhhceeeeE---eeeCchHHHHHHHHHhhccCeeEEe
Q 028143 171 CNMDIISHVQQVICF---AFHDSRLLMETCQEAKNLRKIVTLF 210 (213)
Q Consensus 171 CN~eIisr~qQlIcF---AFHDS~tLl~tc~eAe~~~KvVTLf 210 (213)
.+..++.+||.|+.| -+.+|+=.-.--+.|+++++-|.+|
T Consensus 75 ~~~~lL~~CdevwV~~L~Gw~~S~Gm~~Ei~~A~~~g~pV~~~ 117 (125)
T 1t1j_A 75 VDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEAGGQRVSLW 117 (125)
T ss_dssp HHHHHHHHCSEEEECCCTTGGGCHHHHHHHHHHHHTTCEEEEH
T ss_pred HHHHHHHhCCeeEEEecCCCCCChhHHHHHHHHHHCCCcEEEE
Confidence 557789999999999 8999999999999999999998765
No 18
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=64.41 E-value=12 Score=30.14 Aligned_cols=51 Identities=24% Similarity=0.233 Sum_probs=36.4
Q ss_pred HHhhhhhcCCCceeEeecccccCCChhHHHHHHHhhh-HhcCCCCCCCChHHHHhh
Q 028143 116 IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKT-VIEKPHNDHLPLIEASRL 170 (213)
Q Consensus 116 IRGalrae~p~lLTViLPQSL~kQp~EsrelLe~V~~-lvE~penD~LpL~eAS~l 170 (213)
.+-.|..+++|.+.|..|-.+-. +-....|+.=+| ++|||=- +++.||-+|
T Consensus 67 ~~~ll~~~~iDaV~I~tP~~~H~--~~~~~al~aGkhVl~EKPla--~t~~ea~~l 118 (390)
T 4h3v_A 67 WRTLLERDDVQLVDVCTPGDSHA--EIAIAALEAGKHVLCEKPLA--NTVAEAEAM 118 (390)
T ss_dssp HHHHTTCTTCSEEEECSCGGGHH--HHHHHHHHTTCEEEEESSSC--SSHHHHHHH
T ss_pred HHHHhcCCCCCEEEEeCChHHHH--HHHHHHHHcCCCceeecCcc--cchhHHHHH
Confidence 45566667889999999987643 344556666566 6899964 678888777
No 19
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=57.08 E-value=6.1 Score=31.40 Aligned_cols=43 Identities=14% Similarity=0.023 Sum_probs=30.0
Q ss_pred ccchhHHHHHHHHHHHHHH---h-cCceeecCCCCchHHHHHhhhhh
Q 028143 80 NMGFMHQELIEILSYALVI---T-KNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 80 hv~~~hq~LIEllsyAlvl---~-gn~i~TSGA~GtNaAvIRGalra 122 (213)
..+-+++.+.+.++...-. . .+-++|||++..+.++++..+..
T Consensus 79 g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~ 125 (407)
T 3nra_A 79 GDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVAR 125 (407)
T ss_dssp CCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCT
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCC
Confidence 3445677777777654433 2 57889999999998888877543
No 20
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=54.69 E-value=83 Score=25.36 Aligned_cols=82 Identities=10% Similarity=-0.023 Sum_probs=55.7
Q ss_pred hHHHHHHHHHhcCCceEEEecccccchhH-HHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhhcCCCceeEeeccc
Q 028143 57 DYLQELLAIQQQGPRAIGFFGTRNMGFMH-QELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQS 135 (213)
Q Consensus 57 D~lqELaaIQq~g~rria~lGsRhv~~~h-q~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQS 135 (213)
++++++..+...|.++|.|.|.. -|.++ ..+.|++.+.-.. |-+|-||++. .+-..++-...+ ..+.+. =|
T Consensus 88 ei~~~i~~~~~~g~~~i~~~gGe-~p~~~~~~~~~li~~i~~~-~~~i~~s~g~-l~~e~l~~L~~a-g~~~v~----i~ 159 (348)
T 3iix_A 88 EIVERARLAVQFGAKTIVLQSGE-DPYXMPDVISDIVKEIKKM-GVAVTLSLGE-WPREYYEKWKEA-GADRYL----LR 159 (348)
T ss_dssp HHHHHHHHHHHTTCSEEEEEESC-CGGGTTHHHHHHHHHHHTT-SCEEEEECCC-CCHHHHHHHHHH-TCCEEE----CC
T ss_pred HHHHHHHHHHHCCCCEEEEEeCC-CCCccHHHHHHHHHHHHhc-CceEEEecCC-CCHHHHHHHHHh-CCCEEe----ee
Confidence 38888888889999999998877 46777 8899999887766 6677766543 455566555555 444443 25
Q ss_pred ccCCChhHHHH
Q 028143 136 LKKQPPESQEL 146 (213)
Q Consensus 136 L~kQp~Esrel 146 (213)
++--.++.++.
T Consensus 160 let~~~~~~~~ 170 (348)
T 3iix_A 160 HETANPVLHRK 170 (348)
T ss_dssp CBCSCHHHHHH
T ss_pred eeeCCHHHHHH
Confidence 55444454443
No 21
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=53.19 E-value=9.1 Score=30.62 Aligned_cols=49 Identities=16% Similarity=0.183 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHH-------HHhcCceeecCCCCchHHHHHhhhhhcC-CCceeEeec
Q 028143 85 HQELIEILSYAL-------VITKNHIYTSGASGTNAAVIRGALRAER-PDLLTVILP 133 (213)
Q Consensus 85 hq~LIEllsyAl-------vl~gn~i~TSGA~GtNaAvIRGalrae~-p~lLTViLP 133 (213)
...|-|-++.-+ +-..+-++|+|++..+..++++.++..| .+.-+||+|
T Consensus 77 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~ 133 (417)
T 3g7q_A 77 KTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFP 133 (417)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEES
T ss_pred cHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEe
Confidence 345555555444 3346788999999999999998865533 222245555
No 22
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=50.65 E-value=8 Score=30.89 Aligned_cols=38 Identities=13% Similarity=0.118 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHH-------HHhcCceeecCCCCchHHHHHhhhhh
Q 028143 85 HQELIEILSYAL-------VITKNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 85 hq~LIEllsyAl-------vl~gn~i~TSGA~GtNaAvIRGalra 122 (213)
+..+-|-++.-+ +-..+-++|+|++..+.+++++.++.
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~ 114 (391)
T 3h14_A 70 LPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDS 114 (391)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCT
T ss_pred hHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCC
Confidence 345555555554 34567889999988888888887643
No 23
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=49.07 E-value=9.1 Score=29.95 Aligned_cols=19 Identities=26% Similarity=0.372 Sum_probs=11.8
Q ss_pred ceeecCCCCchHHHHHhhh
Q 028143 102 HIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 102 ~i~TSGA~GtNaAvIRGal 120 (213)
-++|+|++..+.+++++.+
T Consensus 74 v~~~~g~t~a~~~~~~~l~ 92 (386)
T 2dr1_A 74 LLVPSSGTGIMEASIRNGV 92 (386)
T ss_dssp EEESSCHHHHHHHHHHHHS
T ss_pred EEEeCChHHHHHHHHHHhh
Confidence 3466666666666666654
No 24
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=48.53 E-value=13 Score=29.19 Aligned_cols=23 Identities=9% Similarity=0.189 Sum_probs=15.7
Q ss_pred hcCceeecCCCCchHHHHHhhhh
Q 028143 99 TKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 99 ~gn~i~TSGA~GtNaAvIRGalr 121 (213)
..+-++|||++..+.+++++.++
T Consensus 82 ~~~v~~~~g~~~a~~~~~~~l~~ 104 (383)
T 3kax_A 82 KEWIVFSAGIVPALSTSIQAFTK 104 (383)
T ss_dssp GGGEEEESCHHHHHHHHHHHHCC
T ss_pred hhhEEEcCCHHHHHHHHHHHhCC
Confidence 34667777777777777777643
No 25
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=47.83 E-value=13 Score=29.24 Aligned_cols=24 Identities=21% Similarity=0.277 Sum_probs=17.9
Q ss_pred hcCceeecCCCCchHHHHHhhhhh
Q 028143 99 TKNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 99 ~gn~i~TSGA~GtNaAvIRGalra 122 (213)
..+-++|||++..+.++++..++.
T Consensus 90 ~~~v~~~~g~~~a~~~~~~~~~~~ 113 (391)
T 4dq6_A 90 SEWLIYSPGVIPAISLLINELTKA 113 (391)
T ss_dssp GGGEEEESCHHHHHHHHHHHHSCT
T ss_pred HHHeEEcCChHHHHHHHHHHhCCC
Confidence 346788888888888888877543
No 26
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=47.80 E-value=7.3 Score=33.74 Aligned_cols=18 Identities=50% Similarity=0.829 Sum_probs=13.4
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALR 121 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalr 121 (213)
|+|||+ .|.||+ |||+.|
T Consensus 6 IltsGG~~pG~Na~-ir~vv~ 25 (319)
T 4a3s_A 6 VLTSGGDSPGMNAA-VRAVVR 25 (319)
T ss_dssp EEEESSCCTTHHHH-HHHHHH
T ss_pred EECcCCCcHHHHHH-HHHHHH
Confidence 689998 788975 566554
No 27
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=47.61 E-value=13 Score=31.22 Aligned_cols=37 Identities=14% Similarity=0.054 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHh---cCceeecCCCCchHHHHHhhhh
Q 028143 85 HQELIEILSYALVIT---KNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 85 hq~LIEllsyAlvl~---gn~i~TSGA~GtNaAvIRGalr 121 (213)
.+.+.+.++..+-.. .+-++|+|++..|.++++.+.+
T Consensus 109 ~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~ 148 (497)
T 3mc6_A 109 ESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKM 148 (497)
T ss_dssp HHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHH
Confidence 334555555444333 5789999999999999998865
No 28
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=47.06 E-value=17 Score=28.53 Aligned_cols=20 Identities=20% Similarity=-0.017 Sum_probs=10.0
Q ss_pred CceeecCCCCchHHHHHhhh
Q 028143 101 NHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 101 n~i~TSGA~GtNaAvIRGal 120 (213)
+-++|||++..+.+++++.+
T Consensus 84 ~i~~t~g~~~al~~~~~~~~ 103 (376)
T 3ezs_A 84 ELISTLGSREVLFNFPSFVL 103 (376)
T ss_dssp GEEEESSSHHHHHHHHHHHT
T ss_pred HEEECcCcHHHHHHHHHHHc
Confidence 44455555555555555443
No 29
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=46.99 E-value=18 Score=28.38 Aligned_cols=38 Identities=16% Similarity=0.130 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHH-------hcCceeecCCCCchHHHHHhhhhh
Q 028143 85 HQELIEILSYALVI-------TKNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 85 hq~LIEllsyAlvl-------~gn~i~TSGA~GtNaAvIRGalra 122 (213)
+..+.|-++.-+.. ..+-++|||++..+.+++++.++.
T Consensus 64 ~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~~ 108 (391)
T 3dzz_A 64 PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSP 108 (391)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSCT
T ss_pred CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCCC
Confidence 34555555544432 346788888888888888887543
No 30
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=45.94 E-value=14 Score=28.81 Aligned_cols=20 Identities=0% Similarity=-0.076 Sum_probs=13.6
Q ss_pred CceeecCCCCchHHHHHhhh
Q 028143 101 NHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 101 n~i~TSGA~GtNaAvIRGal 120 (213)
+-++|+|++..+.+++++..
T Consensus 61 ~v~~~~g~t~al~~~~~~~~ 80 (385)
T 2bkw_A 61 PFVLAGSGTLGWDIFASNFI 80 (385)
T ss_dssp EEEEESCTTHHHHHHHHHHS
T ss_pred eEEEcCchHHHHHHHHHHHh
Confidence 45667777777777777665
No 31
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=45.89 E-value=12 Score=29.67 Aligned_cols=20 Identities=35% Similarity=0.527 Sum_probs=13.8
Q ss_pred CceeecCCCCchHHHHHhhh
Q 028143 101 NHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 101 n~i~TSGA~GtNaAvIRGal 120 (213)
+-++|||++..+.+++++.+
T Consensus 82 ~v~~~~g~t~al~~~~~~l~ 101 (400)
T 3vax_A 82 ELIFTSGATESNNIALLGLA 101 (400)
T ss_dssp GEEEESCHHHHHHHHHHTTH
T ss_pred cEEEeCCHHHHHHHHHHHHH
Confidence 55677777777777777665
No 32
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=45.69 E-value=6.3 Score=32.54 Aligned_cols=10 Identities=40% Similarity=0.617 Sum_probs=8.6
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-|||||+||.
T Consensus 42 Il~TSGTTG~ 51 (358)
T 4gs5_A 42 VLHTSGSTGM 51 (358)
T ss_dssp EEEEECTTSS
T ss_pred EEECCccccc
Confidence 4799999995
No 33
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=45.11 E-value=25 Score=27.71 Aligned_cols=37 Identities=11% Similarity=0.240 Sum_probs=30.2
Q ss_pred hhHHHHHHHHHhcCCceEEEecccccchhHHHHHHHHH
Q 028143 56 VDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILS 93 (213)
Q Consensus 56 ~D~lqELaaIQq~g~rria~lGsRhv~~~hq~LIElls 93 (213)
.|+++=|...++.+. +||++|.+|+..--..+-+++.
T Consensus 81 ~Dil~al~~a~~~~~-kIavvg~~~~~~~~~~~~~ll~ 117 (196)
T 2q5c_A 81 FDTMRAVYNAKRFGN-ELALIAYKHSIVDKHEIEAMLG 117 (196)
T ss_dssp HHHHHHHHHHGGGCS-EEEEEEESSCSSCHHHHHHHHT
T ss_pred hHHHHHHHHHHhhCC-cEEEEeCcchhhHHHHHHHHhC
Confidence 589999999999875 8999999999877666655553
No 34
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=44.58 E-value=14 Score=28.57 Aligned_cols=19 Identities=21% Similarity=0.335 Sum_probs=9.4
Q ss_pred hcCCCC---CCCChHHHHhhhh
Q 028143 154 IEKPHN---DHLPLIEASRLCN 172 (213)
Q Consensus 154 vE~pen---D~LpL~eAS~lCN 172 (213)
++.|+| .-+|+.+-..+|.
T Consensus 144 ~~~~~nptG~~~~~~~i~~l~~ 165 (382)
T 4hvk_A 144 VQHANNEIGTIQPVEEISEVLA 165 (382)
T ss_dssp CCSBCTTTCBBCCHHHHHHHHS
T ss_pred EECCCCCceeeCCHHHHHHHHH
Confidence 444444 3355555555554
No 35
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=43.87 E-value=18 Score=28.22 Aligned_cols=21 Identities=19% Similarity=0.232 Sum_probs=12.6
Q ss_pred HhcCCCC---CCCChHHHHhhhhH
Q 028143 153 VIEKPHN---DHLPLIEASRLCNM 173 (213)
Q Consensus 153 lvE~pen---D~LpL~eAS~lCN~ 173 (213)
+++.|.| .-+|+.+-..+|.+
T Consensus 143 ~~~~~~nptG~~~~l~~i~~l~~~ 166 (382)
T 4eb5_A 143 SVQHANNEIGTIQPVEEISEVLAG 166 (382)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHTT
T ss_pred EEeccCCCccccCCHHHHHHHHHH
Confidence 4455554 44677776777754
No 36
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=43.52 E-value=14 Score=28.55 Aligned_cols=13 Identities=15% Similarity=-0.023 Sum_probs=7.0
Q ss_pred CCChHHHHhhhhH
Q 028143 161 HLPLIEASRLCNM 173 (213)
Q Consensus 161 ~LpL~eAS~lCN~ 173 (213)
-+|+.+-..+|.+
T Consensus 137 ~~~l~~i~~l~~~ 149 (352)
T 1iug_A 137 LADLPALARAFKE 149 (352)
T ss_dssp ECCHHHHHHHHHH
T ss_pred ecCHHHHHHHHHh
Confidence 3555555555554
No 37
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=43.24 E-value=27 Score=27.23 Aligned_cols=38 Identities=8% Similarity=0.140 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHhcC--ceeecCCCCchHHHHHhhhhh
Q 028143 85 HQELIEILSYALVITKN--HIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 85 hq~LIEllsyAlvl~gn--~i~TSGA~GtNaAvIRGalra 122 (213)
...+.|.++.-+-.... -++|+|++..+.++++.+++.
T Consensus 58 ~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~ 97 (393)
T 3kgw_A 58 MEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEP 97 (393)
T ss_dssp HHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCC
Confidence 34455555544433332 357788887777888777443
No 38
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=42.67 E-value=54 Score=26.65 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=32.9
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhc
Q 028143 58 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK 100 (213)
Q Consensus 58 ~lqELaaIQq~g~rria~lGsRhv~~~hq~LIEllsyAlvl~g 100 (213)
+.+.+..+.+.|.+.|.|.|. =|++|..+.|++.++-...+
T Consensus 55 i~~~i~~~~~~g~~~i~~tGG--EPll~~~l~~li~~~~~~~~ 95 (340)
T 1tv8_A 55 MARIAKVYAELGVKKIRITGG--EPLMRRDLDVLIAKLNQIDG 95 (340)
T ss_dssp HHHHHHHHHHTTCCEEEEESS--CGGGSTTHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHCCCCEEEEeCC--CccchhhHHHHHHHHHhCCC
Confidence 555556666789999999994 59999999999999876654
No 39
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=42.18 E-value=14 Score=29.08 Aligned_cols=19 Identities=11% Similarity=-0.146 Sum_probs=9.5
Q ss_pred CceeecCCCCchHHHHHhh
Q 028143 101 NHIYTSGASGTNAAVIRGA 119 (213)
Q Consensus 101 n~i~TSGA~GtNaAvIRGa 119 (213)
+-++|+|++..+.+++++.
T Consensus 61 ~v~~t~g~t~a~~~~~~~~ 79 (392)
T 2z9v_A 61 PVILHGEPVLGLEAAAASL 79 (392)
T ss_dssp CEEESSCTHHHHHHHHHHH
T ss_pred EEEEeCCchHHHHHHHHHh
Confidence 3444555555555555554
No 40
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=41.88 E-value=14 Score=29.24 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHh-c-CceeecCCCCchHHHHHhhhh
Q 028143 85 HQELIEILSYALVIT-K-NHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 85 hq~LIEllsyAlvl~-g-n~i~TSGA~GtNaAvIRGalr 121 (213)
...+.+.++.-+-.. . +-++|+|++..+.++++.+++
T Consensus 69 ~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~ 107 (393)
T 1vjo_A 69 MDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVE 107 (393)
T ss_dssp HHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccC
Confidence 344444444333222 2 467778887777777777753
No 41
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=41.60 E-value=16 Score=29.07 Aligned_cols=37 Identities=16% Similarity=0.078 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHH-------HhcCceeecCCCCchHHHHHhhhh
Q 028143 85 HQELIEILSYALV-------ITKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 85 hq~LIEllsyAlv-------l~gn~i~TSGA~GtNaAvIRGalr 121 (213)
+..+-|.++.-+. -..+-++|||++..+.+++++.++
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~ 111 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTK 111 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcC
Confidence 5566666655442 234677888888888888876643
No 42
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=41.03 E-value=18 Score=27.86 Aligned_cols=37 Identities=19% Similarity=0.143 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHHHH-hcCceeecCCCCchHHHHHhhh
Q 028143 84 MHQELIEILSYALVI-TKNHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 84 ~hq~LIEllsyAlvl-~gn~i~TSGA~GtNaAvIRGal 120 (213)
+.+.+.+.++.-+-. ..+-++|+|++..+.+++++++
T Consensus 50 ~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~ 87 (359)
T 1svv_A 50 HCAKAARLIGELLERPDADVHFISGGTQTNLIACSLAL 87 (359)
T ss_dssp HHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHh
Confidence 344444444433321 1234556666666666666653
No 43
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=40.65 E-value=23 Score=27.52 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHh-cCceeecCCCCchHHHHHhhh
Q 028143 86 QELIEILSYALVIT-KNHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 86 q~LIEllsyAlvl~-gn~i~TSGA~GtNaAvIRGal 120 (213)
..+.|.++.-+-.. .+-++|+|++..+.++++.+.
T Consensus 47 ~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~ 82 (384)
T 1eg5_A 47 EKAREKVAKVLGVSPSEIFFTSCATESINWILKTVA 82 (384)
T ss_dssp HHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhh
Confidence 44444444433221 355666776666666666665
No 44
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=40.23 E-value=16 Score=28.89 Aligned_cols=19 Identities=16% Similarity=0.205 Sum_probs=10.8
Q ss_pred ceeecCCCCchHHHHHhhh
Q 028143 102 HIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 102 ~i~TSGA~GtNaAvIRGal 120 (213)
-++|+|++..+.++++..+
T Consensus 73 i~~~~g~t~a~~~~~~~~~ 91 (393)
T 2huf_A 73 FCLSASGHGGMEATLCNLL 91 (393)
T ss_dssp EEESSCHHHHHHHHHHHHC
T ss_pred EEEcCcHHHHHHHHHHHHh
Confidence 3455666666666666553
No 45
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=40.20 E-value=1.6e+02 Score=24.49 Aligned_cols=53 Identities=21% Similarity=0.266 Sum_probs=38.9
Q ss_pred HHhhhhhcCCCceeEeecccccCCChhHHHHHHHhhhH-hcCCCCCCCChHHHHhhhh
Q 028143 116 IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKTV-IEKPHNDHLPLIEASRLCN 172 (213)
Q Consensus 116 IRGalrae~p~lLTViLPQSL~kQp~EsrelLe~V~~l-vE~penD~LpL~eAS~lCN 172 (213)
.+-.|..+++|.+.|..|-.+-. +-....|+.=+|| +|||=- +++.||.+|..
T Consensus 88 ~~~ll~~~~vD~V~I~tp~~~H~--~~~~~al~aGkhVl~EKP~a--~~~~ea~~l~~ 141 (412)
T 4gqa_A 88 WRELVNDPQVDVVDITSPNHLHY--TMAMAAIAAGKHVYCEKPLA--VNEQQAQEMAQ 141 (412)
T ss_dssp HHHHHHCTTCCEEEECSCGGGHH--HHHHHHHHTTCEEEEESCSC--SSHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEECCCcHHHH--HHHHHHHHcCCCeEeecCCc--CCHHHHHHHHH
Confidence 45566667899999999987653 4456667776775 899964 57889888764
No 46
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=39.42 E-value=25 Score=27.22 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHh-cCceeecCCCCchHHHHHhhhhh
Q 028143 86 QELIEILSYALVIT-KNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 86 q~LIEllsyAlvl~-gn~i~TSGA~GtNaAvIRGalra 122 (213)
..+.|.++.-+-.. .+-++|+|++..|.++++.+...
T Consensus 72 ~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~ 109 (397)
T 3f9t_A 72 EKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNI 109 (397)
T ss_dssp HHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHH
Confidence 34445554433222 23488888888888888887654
No 47
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=38.98 E-value=24 Score=29.35 Aligned_cols=39 Identities=8% Similarity=-0.095 Sum_probs=26.1
Q ss_pred hhHHHHHHHHHHHHHHhcC------ceeecCCCCchHHHHHhhhh
Q 028143 83 FMHQELIEILSYALVITKN------HIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 83 ~~hq~LIEllsyAlvl~gn------~i~TSGA~GtNaAvIRGalr 121 (213)
-+...+.+.++.-+-.... -++|||||..|..+++++..
T Consensus 81 ~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~ 125 (452)
T 2dgk_A 81 AIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKW 125 (452)
T ss_dssp HHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHH
Confidence 3345566666554443322 58999999999988888764
No 48
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=38.83 E-value=13 Score=33.57 Aligned_cols=18 Identities=28% Similarity=0.361 Sum_probs=12.7
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALR 121 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalr 121 (213)
|+|||+ .|.||| |||+.|
T Consensus 8 VltsGGdapGmNa~-Ir~vv~ 27 (419)
T 3hno_A 8 YAQSGGVTAVINAS-AAGVIE 27 (419)
T ss_dssp EEECSSCCSSHHHH-HHHHHH
T ss_pred EEccCCChHHHHHH-HHHHHH
Confidence 689996 899974 455443
No 49
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=38.72 E-value=11 Score=29.72 Aligned_cols=39 Identities=23% Similarity=0.129 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHHHhc--Cc-eeecCCCCchHHHHHhhhhh
Q 028143 84 MHQELIEILSYALVITK--NH-IYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 84 ~hq~LIEllsyAlvl~g--n~-i~TSGA~GtNaAvIRGalra 122 (213)
.+..+.|.++.-+-... +- ++|+||+..+.+++++.++.
T Consensus 50 ~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~ 91 (362)
T 2c0r_A 50 VHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKE 91 (362)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCC
Confidence 34556666655443333 32 46899999999999988753
No 50
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=38.52 E-value=13 Score=32.38 Aligned_cols=19 Identities=58% Similarity=0.928 Sum_probs=13.6
Q ss_pred eeecCC--CCchHHHHHhhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALRA 122 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalra 122 (213)
|+|||+ .|.||| |||+.|.
T Consensus 7 IltsGGdapGmNaa-ir~vv~~ 27 (320)
T 1pfk_A 7 VLTSGGDAPGMNAA-IRGVVRS 27 (320)
T ss_dssp EEECSSCCTTHHHH-HHHHHHH
T ss_pred EEccCCCchhHHHH-HHHHHHH
Confidence 689998 699974 5555553
No 51
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=38.51 E-value=13 Score=32.37 Aligned_cols=19 Identities=53% Similarity=0.749 Sum_probs=14.0
Q ss_pred eeecCC--CCchHHHHHhhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALRA 122 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalra 122 (213)
|+|||+ .|.||| |||+.|.
T Consensus 6 IltsGGdapGmNaa-ir~vv~~ 26 (319)
T 1zxx_A 6 ILTSGGDAPGMNAA-VRAVTRV 26 (319)
T ss_dssp EEECSSCCTTHHHH-HHHHHHH
T ss_pred EEccCCCchhHHHH-HHHHHHH
Confidence 689998 699974 5666554
No 52
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=38.23 E-value=1.9e+02 Score=24.76 Aligned_cols=142 Identities=16% Similarity=0.199 Sum_probs=79.6
Q ss_pred hcccceeeeccccCCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhcCc---eeecCCCC
Q 028143 39 VEGSGAVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNH---IYTSGASG 110 (213)
Q Consensus 39 ~~~~~~v~~~~~~~~p~~D--~lqELaa-IQq~g~rria~lGsR--hv~~~hq~LIEllsyAlvl~gn~---i~TSGA~G 110 (213)
..|.-..+.++++.--++| -++.+.. +-+.|-.-|.++||- -..+.+.+-.+++..+.-..+.+ |+-.|+..
T Consensus 32 ~~Gv~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s 111 (343)
T 2v9d_A 32 FTGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTN 111 (343)
T ss_dssp SCEECCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSC
T ss_pred cCCeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 4677677788886533455 4555555 446899999999984 45556666666666666544443 34455555
Q ss_pred chHHH--HHhhhhhcCCCceeEeecccccCCChhHHHHHHHhhhHhcCCC---------CCCCChHHHHhhhhHHHHhhh
Q 028143 111 TNAAV--IRGALRAERPDLLTVILPQSLKKQPPESQELLAKVKTVIEKPH---------NDHLPLIEASRLCNMDIISHV 179 (213)
Q Consensus 111 tNaAv--IRGalrae~p~lLTViLPQSL~kQp~EsrelLe~V~~lvE~pe---------nD~LpL~eAS~lCN~eIisr~ 179 (213)
|.-++ .|-|-++ ..+-+-|+-|--.+--+.+..+-.+.|..-+..|- .-.|+.+.-.+|++ ++
T Consensus 112 t~eai~la~~A~~~-Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~-----~~ 185 (343)
T 2v9d_A 112 ARETIELSQHAQQA-GADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLAD-----SR 185 (343)
T ss_dssp HHHHHHHHHHHHHH-TCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHH-----HC
T ss_pred HHHHHHHHHHHHhc-CCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHH-----hC
Confidence 55544 3445444 67777777665433222233333444444333331 23466665556642 34
Q ss_pred ceeeeEe
Q 028143 180 QQVICFA 186 (213)
Q Consensus 180 qQlIcFA 186 (213)
..++.+=
T Consensus 186 pnIvgiK 192 (343)
T 2v9d_A 186 SNIIGIK 192 (343)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 5666543
No 53
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=37.71 E-value=18 Score=28.36 Aligned_cols=35 Identities=9% Similarity=0.088 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHH--hcCceeecCCCCchHHHHHhh
Q 028143 85 HQELIEILSYALVI--TKNHIYTSGASGTNAAVIRGA 119 (213)
Q Consensus 85 hq~LIEllsyAlvl--~gn~i~TSGA~GtNaAvIRGa 119 (213)
...+.|.++.-+-. ..+-++|+|++..+.++++++
T Consensus 69 ~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~ 105 (406)
T 1kmj_A 69 MENVRKRASLFINARSAEELVFVRGTTEGINLVANSW 105 (406)
T ss_dssp HHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHh
Confidence 34455555444332 245677888887787888776
No 54
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=37.51 E-value=15 Score=29.52 Aligned_cols=49 Identities=18% Similarity=0.060 Sum_probs=29.4
Q ss_pred hhHHHHHHHHHHHH-HHh-cCceeecCCCCchHHHHHhhhhhcCCCceeEeec
Q 028143 83 FMHQELIEILSYAL-VIT-KNHIYTSGASGTNAAVIRGALRAERPDLLTVILP 133 (213)
Q Consensus 83 ~~hq~LIEllsyAl-vl~-gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLP 133 (213)
-.+..|.|.++.-+ .-. .+-++|+|++..+.++++.|...-+|+ +||++
T Consensus 84 ~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~--~vi~~ 134 (426)
T 1sff_A 84 EPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRS--GTIAF 134 (426)
T ss_dssp HHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHTCC--EEEEE
T ss_pred HHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhhCCC--eEEEE
Confidence 34566666666544 202 456788888888888888542222454 55554
No 55
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=37.39 E-value=23 Score=30.42 Aligned_cols=45 Identities=20% Similarity=0.143 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHhc--Ccee-ecCCCCchHHHHHhhhhhcCCCceeEe
Q 028143 86 QELIEILSYALVITK--NHIY-TSGASGTNAAVIRGALRAERPDLLTVI 131 (213)
Q Consensus 86 q~LIEllsyAlvl~g--n~i~-TSGA~GtNaAvIRGalrae~p~lLTVi 131 (213)
.+.-|.++.-+-... .-++ |||||..+.++|+|.++. ....+.++
T Consensus 75 ~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~-gd~v~~~~ 122 (386)
T 3qm2_A 75 EEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGD-KTTADYVD 122 (386)
T ss_dssp HHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTT-CCEEEEEE
T ss_pred HHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCC-CCeEEEEe
Confidence 445566666664432 3577 699999999999999876 33344343
No 56
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=36.61 E-value=19 Score=28.69 Aligned_cols=23 Identities=22% Similarity=0.235 Sum_probs=17.1
Q ss_pred hcCceeecCCCCchHHHHHhhhh
Q 028143 99 TKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 99 ~gn~i~TSGA~GtNaAvIRGalr 121 (213)
..+-++|+|++..+.++++..++
T Consensus 99 ~~~i~~~~g~~~al~~~~~~l~~ 121 (398)
T 3ele_A 99 ADNLYMTMGAAASLSICFRALTS 121 (398)
T ss_dssp GGGEEEESSHHHHHHHHHHHHCC
T ss_pred hHHEEEccCHHHHHHHHHHHHcC
Confidence 45667788888888888887754
No 57
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=36.35 E-value=14 Score=29.49 Aligned_cols=37 Identities=27% Similarity=0.201 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHH-------HhcCceeecCCCCchHHHHHhhhh
Q 028143 85 HQELIEILSYALV-------ITKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 85 hq~LIEllsyAlv-------l~gn~i~TSGA~GtNaAvIRGalr 121 (213)
+..+-|.++.-+. -..+-++|||++..+.++++++++
T Consensus 77 ~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~ 120 (407)
T 2zc0_A 77 IPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLID 120 (407)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcC
Confidence 3455555555442 234667888888888888888754
No 58
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=36.08 E-value=27 Score=26.59 Aligned_cols=51 Identities=12% Similarity=0.040 Sum_probs=31.2
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHH-hcCceeecCCCCchH
Q 028143 58 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI-TKNHIYTSGASGTNA 113 (213)
Q Consensus 58 ~lqELaaIQq~g~rria~lGsRhv~~~hq~LIEllsyAlvl-~gn~i~TSGA~GtNa 113 (213)
++.++ +++.|-.-+ ....+|=-...|.+.+..|+.. .-.-|+|||++|...
T Consensus 25 ~l~~~--l~~~G~~v~---~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~ 76 (164)
T 2is8_A 25 AIREV--LAGGPFEVA---AYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLAP 76 (164)
T ss_dssp HHHHH--HTTSSEEEE---EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSST
T ss_pred HHHHH--HHHCCCeEe---EEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC
Confidence 55544 345564322 1223343456778888877754 467899999999763
No 59
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=35.93 E-value=9.8 Score=32.72 Aligned_cols=20 Identities=25% Similarity=0.139 Sum_probs=16.8
Q ss_pred ceeecCCCCchHHHHHhhhhh
Q 028143 102 HIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 102 ~i~TSGA~GtNaAvIRGalra 122 (213)
-++|||+ +.|.+++++.++.
T Consensus 114 V~~~sGs-~an~~~~~all~p 133 (483)
T 1rv3_A 114 VQPYSGS-PANFAVYTALVEP 133 (483)
T ss_dssp CCCSSHH-HHHHHHHHHHTCT
T ss_pred EEECCcH-HHHHHHHHHhcCC
Confidence 6889999 8999999988654
No 60
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=35.82 E-value=15 Score=29.19 Aligned_cols=22 Identities=14% Similarity=0.223 Sum_probs=14.7
Q ss_pred cCceeecCCCCchHHHHHhhhh
Q 028143 100 KNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 100 gn~i~TSGA~GtNaAvIRGalr 121 (213)
.+-++|||++..+.+++++.++
T Consensus 91 ~~v~~~~g~~~a~~~~~~~~~~ 112 (388)
T 1j32_A 91 DNILVTNGGKQSIFNLMLAMIE 112 (388)
T ss_dssp GGEEEESHHHHHHHHHHHHHCC
T ss_pred hhEEEcCCHHHHHHHHHHHhcC
Confidence 4566777777777777776643
No 61
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=35.55 E-value=29 Score=27.77 Aligned_cols=21 Identities=14% Similarity=0.216 Sum_probs=12.3
Q ss_pred HhcCCCC---CCCChHHHHhhhhH
Q 028143 153 VIEKPHN---DHLPLIEASRLCNM 173 (213)
Q Consensus 153 lvE~pen---D~LpL~eAS~lCN~ 173 (213)
+++.|.| .-+|+.+-..+|.+
T Consensus 168 ~~~~~~nptG~~~~l~~i~~l~~~ 191 (423)
T 3lvm_A 168 SIMHVNNEIGVVQDIAAIGEMCRA 191 (423)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHHH
T ss_pred EEeCCCCCCccccCHHHHHHHHHH
Confidence 3455443 45677777777764
No 62
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=35.51 E-value=23 Score=27.59 Aligned_cols=35 Identities=14% Similarity=0.052 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhh
Q 028143 84 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGA 119 (213)
Q Consensus 84 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGa 119 (213)
....+-|.++.-+-.. +-++|+|++..+.++++++
T Consensus 33 ~~~~l~~~la~~~~~~-~v~~~~ggt~al~~~~~~~ 67 (375)
T 2fnu_A 33 RSLLFEEALCEFLGVK-HALVFNSATSALLTLYRNF 67 (375)
T ss_dssp HHHHHHHHHHHHHTCS-EEEEESCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCC-eEEEeCCHHHHHHHHHHHh
Confidence 3455556555544322 6677888877777777776
No 63
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=35.35 E-value=30 Score=29.06 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=24.2
Q ss_pred hcCceeecCCCCchHHHH---HhhhhhcCCCceeEeeccc
Q 028143 99 TKNHIYTSGASGTNAAVI---RGALRAERPDLLTVILPQS 135 (213)
Q Consensus 99 ~gn~i~TSGA~GtNaAvI---RGalrae~p~lLTViLPQS 135 (213)
-||-++-.|+.|...|++ ++|||+ -..++||..|++
T Consensus 30 ~G~vlvigGs~~~~GA~~laa~aAlr~-GaGlv~~~~~~~ 68 (279)
T 3rpz_A 30 YGTALLLAGSDDMPGAALLAGLGAMRS-GLGKLVIGTSEN 68 (279)
T ss_dssp GCEEEEECCBTTBCHHHHHHHHHHHTT-TCSEEEEEECTT
T ss_pred CCEEEEEeCCCCCCcHHHHHHHHHHHh-CCCeEEEEecHH
Confidence 456666667666555544 777887 777777777665
No 64
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=35.32 E-value=37 Score=26.75 Aligned_cols=36 Identities=19% Similarity=0.147 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHH-hcCceeecCCCCchHHHHHhhhh
Q 028143 86 QELIEILSYALVI-TKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 86 q~LIEllsyAlvl-~gn~i~TSGA~GtNaAvIRGalr 121 (213)
..|-|.++.-+-. ..+-++|||++..+.+++++.++
T Consensus 68 ~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~~ 104 (360)
T 3hdo_A 68 QKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAA 104 (360)
T ss_dssp HHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHhC
Confidence 4555555544421 24566777777777777776543
No 65
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=35.27 E-value=15 Score=28.60 Aligned_cols=21 Identities=14% Similarity=0.404 Sum_probs=11.7
Q ss_pred HhcCCCC---CCCChHHHHhhhhH
Q 028143 153 VIEKPHN---DHLPLIEASRLCNM 173 (213)
Q Consensus 153 lvE~pen---D~LpL~eAS~lCN~ 173 (213)
+++.|+| .-+|+.+-..+|.+
T Consensus 152 ~~~~~~nptG~~~~~~~i~~~~~~ 175 (371)
T 2e7j_A 152 LITYPDGNYGNLPDVKKIAKVCSE 175 (371)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHT
T ss_pred EEECCCCCCcccCCHHHHHHHHHH
Confidence 3455543 34666666666654
No 66
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=35.26 E-value=24 Score=27.81 Aligned_cols=14 Identities=21% Similarity=0.408 Sum_probs=7.6
Q ss_pred CCCChHHHHhhhhH
Q 028143 160 DHLPLIEASRLCNM 173 (213)
Q Consensus 160 D~LpL~eAS~lCN~ 173 (213)
.-+|+.+-..+|.+
T Consensus 158 ~~~~~~~i~~l~~~ 171 (396)
T 2ch1_A 158 LLQPLEGVGQICHQ 171 (396)
T ss_dssp EECCCTTHHHHHHH
T ss_pred eecCHHHHHHHHHH
Confidence 34555555556654
No 67
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=35.18 E-value=22 Score=27.95 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHH-hcCceeecCCCCchHHHHHhhhh
Q 028143 86 QELIEILSYALVI-TKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 86 q~LIEllsyAlvl-~gn~i~TSGA~GtNaAvIRGalr 121 (213)
..+-|.++.-+-. ..+-++|||++..+.+++++.++
T Consensus 70 ~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~~ 106 (363)
T 3ffh_A 70 SSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLD 106 (363)
T ss_dssp HHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHcc
Confidence 4455555444322 24566777777777777776644
No 68
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=35.03 E-value=30 Score=26.40 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=23.0
Q ss_pred cchhHHHHHHHHHHHHHHhcCceeecCCCCch
Q 028143 81 MGFMHQELIEILSYALVITKNHIYTSGASGTN 112 (213)
Q Consensus 81 v~~~hq~LIEllsyAlvl~gn~i~TSGA~GtN 112 (213)
+|==...|.+.+..|+...-.-|+|||++|..
T Consensus 51 v~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~ 82 (167)
T 2g2c_A 51 VPEGYDTVVEAIATALKQGARFIITAGGTGIR 82 (167)
T ss_dssp ECSSHHHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred eCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 33334667777777765446899999999975
No 69
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=34.69 E-value=28 Score=26.92 Aligned_cols=50 Identities=14% Similarity=0.201 Sum_probs=30.9
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHH-hcCceeecCCCCch
Q 028143 58 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI-TKNHIYTSGASGTN 112 (213)
Q Consensus 58 ~lqELaaIQq~g~rria~lGsRhv~~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 112 (213)
++.++ +++.|-..+. ...+|=-...|.+.+..|+.. .-.-|+|||++|..
T Consensus 32 ~l~~~--L~~~G~~v~~---~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~ 82 (172)
T 1mkz_A 32 YLRDS--AQEAGHHVVD---KAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLT 82 (172)
T ss_dssp HHHHH--HHHTTCEEEE---EEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSS
T ss_pred HHHHH--HHHCCCeEeE---EEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCC
Confidence 55544 3445653221 123343456777888877764 36799999999975
No 70
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=33.94 E-value=20 Score=29.48 Aligned_cols=37 Identities=19% Similarity=0.039 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHH------HhcCceeecCCCCchHHHHHhhhh
Q 028143 85 HQELIEILSYALV------ITKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 85 hq~LIEllsyAlv------l~gn~i~TSGA~GtNaAvIRGalr 121 (213)
+..+.|.++.-+- -..+-++|+|+++.+..+++...+
T Consensus 98 ~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~ 140 (427)
T 3dyd_A 98 FLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLAN 140 (427)
T ss_dssp CHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcC
Confidence 4566666665553 346778999999999888888754
No 71
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=33.61 E-value=18 Score=28.43 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHH--hcCceeecCCCCchHHHHHhhhhh
Q 028143 85 HQELIEILSYALVI--TKNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 85 hq~LIEllsyAlvl--~gn~i~TSGA~GtNaAvIRGalra 122 (213)
+..+-|.++.-+-. ..+-++|||++..+.+++++.++.
T Consensus 69 ~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~ 108 (367)
T 3euc_A 69 SEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARP 108 (367)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHcCC
Confidence 45666666655433 236677888877777777776543
No 72
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=33.59 E-value=24 Score=28.01 Aligned_cols=20 Identities=10% Similarity=0.019 Sum_probs=12.0
Q ss_pred hcCCCCCCCChHHHHhhhhH
Q 028143 154 IEKPHNDHLPLIEASRLCNM 173 (213)
Q Consensus 154 vE~penD~LpL~eAS~lCN~ 173 (213)
+.+|...-.|+.+-..+|.+
T Consensus 130 ~~n~~G~~~~l~~i~~l~~~ 149 (373)
T 3frk_A 130 AVHLYGQPADMDEIKRIAKK 149 (373)
T ss_dssp EECCTTCCCCHHHHHHHHHH
T ss_pred EECCCcCcccHHHHHHHHHH
Confidence 44555556666666666654
No 73
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=33.17 E-value=1.6e+02 Score=24.00 Aligned_cols=61 Identities=15% Similarity=0.182 Sum_probs=38.9
Q ss_pred hHHHHHHHHHhcCCceEEEecccccchh------HHHHHHHHHHHHHHhcC-ce--eecCCCCchHHHHHh
Q 028143 57 DYLQELLAIQQQGPRAIGFFGTRNMGFM------HQELIEILSYALVITKN-HI--YTSGASGTNAAVIRG 118 (213)
Q Consensus 57 D~lqELaaIQq~g~rria~lGsRhv~~~------hq~LIEllsyAlvl~gn-~i--~TSGA~GtNaAvIRG 118 (213)
++++|+..+.+.|.|.|.|.|. ++.+. +..+.|++.+.-...|- ++ .|+-....+-..|+-
T Consensus 37 ~i~~ei~~l~~~G~~ei~l~g~-~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~~ir~~~~~p~~l~~e~l~~ 106 (304)
T 2qgq_A 37 DITREVEDLLKEGKKEIILVAQ-DTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISA 106 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEEECT-TGGGTTHHHHSSCCHHHHHHHHHTSSSSCEEEECCCCGGGCCHHHHHH
T ss_pred HHHHHHHHHHHCCCcEEEEEeE-cccccCCCCCcHHHHHHHHHHHHhcCCCcEEEEeeeecccCCHHHHHH
Confidence 4899999998899999999885 33321 45688888776655453 33 222233345555553
No 74
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=33.02 E-value=24 Score=30.03 Aligned_cols=39 Identities=13% Similarity=0.054 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHHHHHh---cCc--eeecCCCCchHHHHHhhhhh
Q 028143 84 MHQELIEILSYALVIT---KNH--IYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 84 ~hq~LIEllsyAlvl~---gn~--i~TSGA~GtNaAvIRGalra 122 (213)
+.+.+.+.++.-+-.. .+- ++|+|++..|.++++.+.+.
T Consensus 140 le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~ 183 (514)
T 3mad_A 140 FEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDW 183 (514)
T ss_dssp HHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHH
Confidence 3345556666554444 466 99999999999999988654
No 75
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=32.69 E-value=23 Score=27.51 Aligned_cols=19 Identities=16% Similarity=0.302 Sum_probs=11.5
Q ss_pred ceeecCCCCchHHHHHhhhh
Q 028143 102 HIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 102 ~i~TSGA~GtNaAvIRGalr 121 (213)
-++|+|++..+. ++++.+.
T Consensus 57 v~~~~g~t~al~-~~~~~~~ 75 (384)
T 3zrp_A 57 LIIPGGGTSAME-SVTSLLK 75 (384)
T ss_dssp EEEESCHHHHHH-HGGGGCC
T ss_pred EEEcCCcHHHHH-HHHhhcC
Confidence 466666666666 6665543
No 76
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=32.67 E-value=26 Score=27.42 Aligned_cols=23 Identities=4% Similarity=-0.254 Sum_probs=16.7
Q ss_pred hcCceeecCCCCchHHHHHhhhh
Q 028143 99 TKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 99 ~gn~i~TSGA~GtNaAvIRGalr 121 (213)
..+-++|||++..+.+++++.++
T Consensus 81 ~~~i~~t~g~~~a~~~~~~~~~~ 103 (377)
T 3fdb_A 81 PEWIFPIPDVVRGLYIAIDHFTP 103 (377)
T ss_dssp GGGEEEESCHHHHHHHHHHHHSC
T ss_pred HHHEEEeCChHHHHHHHHHHhcC
Confidence 45677788888777777777654
No 77
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=32.58 E-value=35 Score=26.36 Aligned_cols=28 Identities=29% Similarity=0.261 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHhcCceeecCCCCchH
Q 028143 86 QELIEILSYALVITKNHIYTSGASGTNA 113 (213)
Q Consensus 86 q~LIEllsyAlvl~gn~i~TSGA~GtNa 113 (213)
..|.+.+..|+...-.-|+|||++|...
T Consensus 53 ~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 53 SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 5667777777653457899999999764
No 78
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=32.48 E-value=16 Score=27.99 Aligned_cols=19 Identities=11% Similarity=-0.149 Sum_probs=10.6
Q ss_pred ceeecCCCCchHHHHHhhh
Q 028143 102 HIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 102 ~i~TSGA~GtNaAvIRGal 120 (213)
-++|+|++..+..+++..+
T Consensus 55 v~~t~g~t~a~~~~~~~~~ 73 (353)
T 2yrr_A 55 AALAGSGSLGMEAGLANLD 73 (353)
T ss_dssp EEESSCHHHHHHHHHHTCS
T ss_pred EEEcCCcHHHHHHHHHHhc
Confidence 4555666555555555554
No 79
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=32.35 E-value=15 Score=31.43 Aligned_cols=10 Identities=50% Similarity=0.966 Sum_probs=8.8
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 160 i~~TSGTTG~ 169 (505)
T 3nyq_A 160 VVYTSGTTGP 169 (505)
T ss_dssp EEEECCSSSS
T ss_pred EEeCCCCcCC
Confidence 4899999996
No 80
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=32.28 E-value=30 Score=27.14 Aligned_cols=36 Identities=22% Similarity=0.236 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHH-hcCceeecCCCCchHHHHHhhhh
Q 028143 86 QELIEILSYALVI-TKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 86 q~LIEllsyAlvl-~gn~i~TSGA~GtNaAvIRGalr 121 (213)
..|-|.++.-+-. ..+-++|||++..+.+++++.++
T Consensus 68 ~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~~ 104 (365)
T 3get_A 68 IELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLN 104 (365)
T ss_dssp HHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHhC
Confidence 4566665554422 24667778877777777777654
No 81
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=32.22 E-value=14 Score=32.47 Aligned_cols=10 Identities=30% Similarity=0.591 Sum_probs=8.5
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 189 ii~TSGSTG~ 198 (617)
T 3rg2_A 189 FQLSGGTTGT 198 (617)
T ss_dssp EEECCCSSSS
T ss_pred EEECCCcCCC
Confidence 4789999995
No 82
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=32.20 E-value=26 Score=28.24 Aligned_cols=21 Identities=29% Similarity=0.336 Sum_probs=14.0
Q ss_pred CceeecCCCCchHHHHHhhhh
Q 028143 101 NHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 101 n~i~TSGA~GtNaAvIRGalr 121 (213)
+-++|+|++..+.+++++.++
T Consensus 103 ~i~~t~g~~~al~~~~~~~~~ 123 (413)
T 3t18_A 103 SAIATPGGTGAIRSAIFSYLD 123 (413)
T ss_dssp EEEEESHHHHHHHHHHHHHCC
T ss_pred cEEEcCccHHHHHHHHHHhcC
Confidence 566777777777777776543
No 83
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=32.09 E-value=33 Score=26.15 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=23.2
Q ss_pred cchhHHHHHHHHHHHHHH-hcCceeecCCCCch
Q 028143 81 MGFMHQELIEILSYALVI-TKNHIYTSGASGTN 112 (213)
Q Consensus 81 v~~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 112 (213)
+|=-...|.+.+..|+.. .-.-|+|||++|..
T Consensus 52 v~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 84 (167)
T 1uuy_A 52 VPDEVERIKDILQKWSDVDEMDLILTLGGTGFT 84 (167)
T ss_dssp ECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred cCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 343446777888887753 56789999999875
No 84
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=32.01 E-value=15 Score=32.83 Aligned_cols=10 Identities=30% Similarity=0.630 Sum_probs=8.6
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 169 iiyTSGSTG~ 178 (620)
T 4dg8_A 169 INFSSGTTGR 178 (620)
T ss_dssp EEEEBSSSSS
T ss_pred EEECCCcccc
Confidence 3799999996
No 85
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=31.95 E-value=21 Score=27.85 Aligned_cols=20 Identities=25% Similarity=0.230 Sum_probs=10.4
Q ss_pred CceeecCCCCchHHHHHhhh
Q 028143 101 NHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 101 n~i~TSGA~GtNaAvIRGal 120 (213)
+-++|||++..+.+++++.+
T Consensus 70 ~i~~~~g~~~a~~~~~~~l~ 89 (354)
T 3ly1_A 70 SILLTAGSSEGIRAAIEAYA 89 (354)
T ss_dssp GEEEESHHHHHHHHHHHHHC
T ss_pred HEEEeCChHHHHHHHHHHHh
Confidence 44555555555555555443
No 86
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=31.90 E-value=34 Score=26.51 Aligned_cols=51 Identities=14% Similarity=0.046 Sum_probs=33.2
Q ss_pred HHHHHH-HHHhcCCceEEEecccccchhHHHHHHHHHHHHHH-hcCceeecCCCCch
Q 028143 58 YLQELL-AIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVI-TKNHIYTSGASGTN 112 (213)
Q Consensus 58 ~lqELa-aIQq~g~rria~lGsRhv~~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 112 (213)
++.++. .+.+.|-.- .. ..+|=-...|.+.+..++.. .-.-|+|||++|..
T Consensus 29 ~l~~~l~~l~~~G~~v--~~--~iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~g 81 (178)
T 2pbq_A 29 AIIDYLKDVIITPFEV--EY--RVIPDERDLIEKTLIELADEKGCSLILTTGGTGPA 81 (178)
T ss_dssp HHHHHHHHHBCSCCEE--EE--EEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred HHHHHHHHHHhCCCEE--EE--EEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 555443 233567543 22 25565567788888888763 56789999999976
No 87
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=31.86 E-value=24 Score=27.88 Aligned_cols=21 Identities=24% Similarity=0.164 Sum_probs=13.9
Q ss_pred cCceeecCCCCchHHHHHhhh
Q 028143 100 KNHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 100 gn~i~TSGA~GtNaAvIRGal 120 (213)
.+-++|+|++..+.+++++.+
T Consensus 90 ~~v~~~~g~~~a~~~~~~~~~ 110 (370)
T 2z61_A 90 DNIIITGGSSLGLFFALSSII 110 (370)
T ss_dssp GGEEEESSHHHHHHHHHHHHC
T ss_pred hhEEECCChHHHHHHHHHHhc
Confidence 456677777766666666654
No 88
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=31.83 E-value=22 Score=30.25 Aligned_cols=55 Identities=20% Similarity=0.129 Sum_probs=32.4
Q ss_pred CCceEEEecccccchhHHHHHHHHHHHHHHhcCce----eecCCCCchHHHHHhhhhhcCCCceeEeec
Q 028143 69 GPRAIGFFGTRNMGFMHQELIEILSYALVITKNHI----YTSGASGTNAAVIRGALRAERPDLLTVILP 133 (213)
Q Consensus 69 g~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i----~TSGA~GtNaAvIRGalrae~p~lLTViLP 133 (213)
.+++|-|+|||+. .|.+|+-. |.....+.+ . .|++=||-.. +.. ..|++|-|+=|
T Consensus 65 ~~~~iLfVgtk~~---~~~~V~~~--A~~~g~~yv~~~RW-lgG~LTN~~t--~~~--~~PdlliV~Dp 123 (241)
T 2xzm_B 65 HPEDVMVVCSRIY---GQRAAIKF--AGYTHCKSTSSSRW-TPGTLTNYQT--LKY--EEPRVLIVTDP 123 (241)
T ss_dssp SGGGEEEECCSHH---HHHHHHHH--HHHHTCBCCCCSSC-CTTTTTCTTC--TTC--CCCSEEEESCT
T ss_pred CCCeEEEEECCHH---HHHHHHHH--HHHhCCEEeccccc-cCCcccCccc--ccc--CCCCEEEEECC
Confidence 3678999999975 36665533 333333334 3 3677777643 333 25888776643
No 89
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=31.66 E-value=15 Score=31.47 Aligned_cols=10 Identities=40% Similarity=0.471 Sum_probs=8.5
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 172 i~~TSGTTG~ 181 (590)
T 3kxw_A 172 LQYTSGSTMH 181 (590)
T ss_dssp EEECSSCSSS
T ss_pred EEeCcCCCCC
Confidence 3799999994
No 90
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=30.92 E-value=20 Score=28.83 Aligned_cols=37 Identities=24% Similarity=0.205 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHH-------hcCceeecCCCCchHHHHHhhhh
Q 028143 85 HQELIEILSYALVI-------TKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 85 hq~LIEllsyAlvl-------~gn~i~TSGA~GtNaAvIRGalr 121 (213)
...|-|-++.-+.. ..+-++|+|++..+..++++.++
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~ 113 (385)
T 1b5p_A 70 IPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD 113 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcC
Confidence 34555555544422 34677888888888888888754
No 91
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=30.77 E-value=32 Score=28.35 Aligned_cols=37 Identities=16% Similarity=0.072 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhh
Q 028143 84 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 84 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalr 121 (213)
.+..+-|.++.-+-. .+-++|||++..|.++++++++
T Consensus 57 ~~~~l~~~la~~~g~-~~~~~~~~gt~a~~~al~~l~~ 93 (412)
T 2cb1_A 57 TAKALEERLKALEGA-LEAVVLASGQAATFAALLALLR 93 (412)
T ss_dssp HHHHHHHHHHHHHTC-SEEEEESSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHHhC
Confidence 355555555544322 3567777777777777777643
No 92
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=30.66 E-value=15 Score=30.84 Aligned_cols=10 Identities=40% Similarity=0.850 Sum_probs=8.6
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 168 i~~TSGTTG~ 177 (501)
T 3ipl_A 168 IMFTSGTTGP 177 (501)
T ss_dssp EEECCTTTSC
T ss_pred EEECCCCCCC
Confidence 3799999995
No 93
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=30.59 E-value=97 Score=23.74 Aligned_cols=61 Identities=20% Similarity=0.307 Sum_probs=36.9
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHHHH
Q 028143 70 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAK 149 (213)
Q Consensus 70 ~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~kQp~EsrelLe~ 149 (213)
.++|+|+|.-+|+- .+++.|+..|+.++-..-+-. .+.+.|++-+-+| +...++.+++
T Consensus 19 ~~~I~iiG~G~mG~-------~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av~------~~~~~~v~~~ 76 (209)
T 2raf_A 19 GMEITIFGKGNMGQ-------AIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAVP------YPALAALAKQ 76 (209)
T ss_dssp -CEEEEECCSHHHH-------HHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECSC------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHH-------HHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcCC------cHHHHHHHHH
Confidence 46899999988884 356777778887764432211 2335676666666 2334555555
Q ss_pred hhh
Q 028143 150 VKT 152 (213)
Q Consensus 150 V~~ 152 (213)
+..
T Consensus 77 l~~ 79 (209)
T 2raf_A 77 YAT 79 (209)
T ss_dssp THH
T ss_pred HHH
Confidence 543
No 94
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=30.53 E-value=28 Score=27.75 Aligned_cols=39 Identities=23% Similarity=0.057 Sum_probs=27.1
Q ss_pred chhHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhh
Q 028143 82 GFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 82 ~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalr 121 (213)
+-..+.+.+.++.-+-. .+-++|+|++..+.++++..+.
T Consensus 87 ~~~~~~l~~~la~~~g~-~~v~~~~ggt~a~~~~~~~~~~ 125 (398)
T 3a2b_A 87 LDIHVELEEKLSAYVGK-EAAILFSTGFQSNLGPLSCLMG 125 (398)
T ss_dssp CHHHHHHHHHHHHHHTC-SEEEEESSHHHHHHHHHHHSSC
T ss_pred cHHHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHHhC
Confidence 34566777777655432 4778899988888888887753
No 95
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=30.28 E-value=31 Score=27.42 Aligned_cols=22 Identities=23% Similarity=0.338 Sum_probs=16.4
Q ss_pred cCceeecCCCCchHHHHHhhhh
Q 028143 100 KNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 100 gn~i~TSGA~GtNaAvIRGalr 121 (213)
.+-++|+|++..+.++++..++
T Consensus 86 ~~i~~~~g~~~a~~~~~~~~~~ 107 (410)
T 3e2y_A 86 EEILVAVGAYGSLFNSIQGLVD 107 (410)
T ss_dssp TSEEEESHHHHHHHHHHHHHCC
T ss_pred CCEEEeCCcHHHHHHHHHHhcC
Confidence 5677888888877777777654
No 96
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=30.23 E-value=26 Score=27.88 Aligned_cols=34 Identities=9% Similarity=0.083 Sum_probs=22.4
Q ss_pred HHHHHHHHHH-------HhcCceeecCCCCchHHHHHhhhh
Q 028143 88 LIEILSYALV-------ITKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 88 LIEllsyAlv-------l~gn~i~TSGA~GtNaAvIRGalr 121 (213)
+-|-++.-+. -..+-++|||++..+.++++...+
T Consensus 69 lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~ 109 (390)
T 1d2f_A 69 FLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSE 109 (390)
T ss_dssp HHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcC
Confidence 5555554442 235678888888888888887653
No 97
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=30.13 E-value=17 Score=31.25 Aligned_cols=10 Identities=40% Similarity=0.790 Sum_probs=8.5
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 181 i~~TSGTTG~ 190 (541)
T 1v25_A 181 MAYTTGTTGL 190 (541)
T ss_dssp EEEECSSSSS
T ss_pred EEECCCCCCC
Confidence 3799999995
No 98
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=30.10 E-value=1.3e+02 Score=24.94 Aligned_cols=63 Identities=10% Similarity=-0.018 Sum_probs=41.5
Q ss_pred hHHHHHHHHHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhcCce-eecCCCCchHHHHHhhhhh
Q 028143 57 DYLQELLAIQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNHI-YTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 57 D~lqELaaIQq~g~rria~lGsR--hv~~~hq~LIEllsyAlvl~gn~i-~TSGA~GtNaAvIRGalra 122 (213)
++++++..+...|.++|.|-|+- +-+.-+..+.|++.+.-.. |=.+ +|.|. .+...++-...+
T Consensus 103 ei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~-g~~i~~t~G~--l~~e~l~~L~~a 168 (369)
T 1r30_A 103 QVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAM-GLEACMTLGT--LSESQAQRLANA 168 (369)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHT-TSEEEEECSS--CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHc-CCeEEEecCC--CCHHHHHHHHHC
Confidence 37788888888999999998753 6667788999999877653 3222 34443 344455544333
No 99
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=29.94 E-value=15 Score=31.43 Aligned_cols=10 Identities=50% Similarity=0.926 Sum_probs=5.8
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 175 i~~TSGTTG~ 184 (517)
T 3r44_A 175 IMYTSGTTGH 184 (517)
T ss_dssp EEEECC---C
T ss_pred EEECCccccc
Confidence 4899999995
No 100
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=29.93 E-value=14 Score=31.37 Aligned_cols=10 Identities=50% Similarity=0.939 Sum_probs=6.7
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 160 i~~TSGTTG~ 169 (503)
T 4fuq_A 160 ILYTSGTTGR 169 (503)
T ss_dssp EEECC--CCS
T ss_pred EEECCCcccC
Confidence 4899999995
No 101
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=29.87 E-value=28 Score=26.77 Aligned_cols=19 Identities=26% Similarity=0.232 Sum_probs=9.8
Q ss_pred ceeecCCCCchHHHHHhhh
Q 028143 102 HIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 102 ~i~TSGA~GtNaAvIRGal 120 (213)
-++|+|++..+.+++++++
T Consensus 59 v~~~~g~t~a~~~~~~~~~ 77 (366)
T 1m32_A 59 VLLQGSGSYAVEAVLGSAL 77 (366)
T ss_dssp EEEESCHHHHHHHHHHHSC
T ss_pred EEEecChHHHHHHHHHHhc
Confidence 4455555555555555543
No 102
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=29.81 E-value=16 Score=31.27 Aligned_cols=10 Identities=40% Similarity=0.700 Sum_probs=8.4
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 183 i~~TSGTTG~ 192 (536)
T 3ni2_A 183 LPYSSGTTGL 192 (536)
T ss_dssp CCEECTTSSS
T ss_pred EEcCCCcccc
Confidence 3699999995
No 103
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=29.80 E-value=33 Score=26.44 Aligned_cols=17 Identities=12% Similarity=0.214 Sum_probs=9.5
Q ss_pred eeecCCCCchHHHHHhh
Q 028143 103 IYTSGASGTNAAVIRGA 119 (213)
Q Consensus 103 i~TSGA~GtNaAvIRGa 119 (213)
++|+|++..|.++++.+
T Consensus 63 ~~~~~gt~a~~~al~~~ 79 (356)
T 1v72_A 63 FLVPTGTAANALCLSAM 79 (356)
T ss_dssp EEESCHHHHHHHHHHTS
T ss_pred EEeCCccHHHHHHHHHh
Confidence 55555555555555554
No 104
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=29.75 E-value=43 Score=26.63 Aligned_cols=48 Identities=17% Similarity=0.167 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcCC--ceEEEecccccchhHHHHHHHHHHHHHHhcCceeecCCCCchH
Q 028143 58 YLQELLAIQQQGP--RAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASGTNA 113 (213)
Q Consensus 58 ~lqELaaIQq~g~--rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNa 113 (213)
++.++ +.+.|- .++.+++- -...|.+.+..|+.. -.-|+|||++|...
T Consensus 27 ~l~~~--L~~~G~~v~~~~iv~D-----d~~~I~~~l~~a~~~-~DlVittGG~g~~~ 76 (172)
T 3kbq_A 27 FIGNF--LTYHGYQVRRGFVVMD-----DLDEIGWAFRVALEV-SDLVVSSGGLGPTF 76 (172)
T ss_dssp HHHHH--HHHTTCEEEEEEEECS-----CHHHHHHHHHHHHHH-CSEEEEESCCSSST
T ss_pred HHHHH--HHHCCCEEEEEEEeCC-----CHHHHHHHHHHHHhc-CCEEEEcCCCcCCc
Confidence 45443 344554 33444443 356777888777664 78999999999764
No 105
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=29.73 E-value=15 Score=31.10 Aligned_cols=10 Identities=30% Similarity=0.355 Sum_probs=6.8
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 165 i~~TSGTTG~ 174 (509)
T 3ivr_A 165 IIHTAAVGGR 174 (509)
T ss_dssp EEEEEC--CC
T ss_pred EEeCCCCCCC
Confidence 4899999996
No 106
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=29.68 E-value=53 Score=26.61 Aligned_cols=21 Identities=19% Similarity=0.309 Sum_probs=13.3
Q ss_pred HhcCCCCC---CCChHHHHhhhhH
Q 028143 153 VIEKPHND---HLPLIEASRLCNM 173 (213)
Q Consensus 153 lvE~penD---~LpL~eAS~lCN~ 173 (213)
++|.|.|- -.|+.+-..+|.+
T Consensus 154 ~~~~~~nptG~~~~l~~i~~l~~~ 177 (398)
T 2rfv_A 154 YIETPANPTLSLVDIETVAGIAHQ 177 (398)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHH
T ss_pred EEECCCCCCCcccCHHHHHHHHHH
Confidence 35666653 4577777777765
No 107
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=29.50 E-value=31 Score=27.84 Aligned_cols=35 Identities=17% Similarity=-0.064 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHH-------HhcCceeecCCCCchHHHHHhhh
Q 028143 86 QELIEILSYALV-------ITKNHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 86 q~LIEllsyAlv-------l~gn~i~TSGA~GtNaAvIRGal 120 (213)
..+-|-++.-+. -..+-++|||++..+.+++++.+
T Consensus 85 ~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~ 126 (437)
T 3g0t_A 85 PELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVAN 126 (437)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHh
Confidence 445555554443 24577888888888888888876
No 108
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=29.26 E-value=47 Score=26.51 Aligned_cols=40 Identities=10% Similarity=0.045 Sum_probs=29.8
Q ss_pred chhHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhh
Q 028143 82 GFMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 82 ~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalra 122 (213)
.-.+..|.|.++.-+- ..+-++|||++..|.++|+.+.+.
T Consensus 77 ~~~~~~l~~~la~~~~-~~~v~~~~gg~ea~~~al~~~~~~ 116 (395)
T 3nx3_A 77 NENIAAAAKNLAKASA-LERVFFTNSGTESIEGAMKTARKY 116 (395)
T ss_dssp CHHHHHHHHHHHHHHT-CSEEEEESSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC-CCeEEEeCCHHHHHHHHHHHHHHH
Confidence 3456777777765543 457799999999999999987654
No 109
>3gtz_A Putative translation initiation inhibitor; structural genomics, unknown function, PSI-2, protein struct initiative; 2.50A {Salmonella typhimurium}
Probab=29.16 E-value=11 Score=27.91 Aligned_cols=15 Identities=20% Similarity=0.372 Sum_probs=12.8
Q ss_pred HhcCceeecCCCCch
Q 028143 98 ITKNHIYTSGASGTN 112 (213)
Q Consensus 98 l~gn~i~TSGA~GtN 112 (213)
..||.||+||-.|.+
T Consensus 19 ~~g~~lfvSGq~~~d 33 (124)
T 3gtz_A 19 IYNNTLWYTGVPENL 33 (124)
T ss_dssp EETTEEEEEECCSCT
T ss_pred EECCEEEEeccCCCC
Confidence 459999999988876
No 110
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=29.08 E-value=26 Score=28.46 Aligned_cols=21 Identities=10% Similarity=0.112 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHhcCceeec
Q 028143 86 QELIEILSYALVITKNHIYTS 106 (213)
Q Consensus 86 q~LIEllsyAlvl~gn~i~TS 106 (213)
.+.++++..++...|..|++.
T Consensus 118 ~~ai~~~~~~~~~~gd~Vl~~ 138 (428)
T 1iay_A 118 TGANETIIFCLADPGDAFLVP 138 (428)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCeEEEc
Confidence 455666666665555555544
No 111
>3kjj_A NMB1025 protein; YJGF protein family, OPPF, structural genomics, oxford protein production facility, UN function; 1.90A {Neisseria meningitidis serogroup B} PDB: 3kjk_A
Probab=29.07 E-value=13 Score=27.87 Aligned_cols=15 Identities=27% Similarity=0.277 Sum_probs=12.9
Q ss_pred HhcCceeecCCCCch
Q 028143 98 ITKNHIYTSGASGTN 112 (213)
Q Consensus 98 l~gn~i~TSGA~GtN 112 (213)
..||.||+||=.|.+
T Consensus 25 ~~g~~lfvSGq~~~d 39 (128)
T 3kjj_A 25 GANGLIFLSGMVPEN 39 (128)
T ss_dssp EETTEEEECCBCCSS
T ss_pred EECCEEEEeecCCCC
Confidence 469999999998876
No 112
>3ml1_A NAPA, periplasmic nitrate reductase; heterodimer, oxidoreductase; HET: MGD HEC; 1.60A {Ralstonia eutropha} PDB: 3o5a_A* 1ogy_A* 2nya_A*
Probab=29.01 E-value=76 Score=30.02 Aligned_cols=28 Identities=25% Similarity=0.587 Sum_probs=22.3
Q ss_pred hh-HHHHHHHHHh-cCCceEEEecccccch
Q 028143 56 VD-YLQELLAIQQ-QGPRAIGFFGTRNMGF 83 (213)
Q Consensus 56 ~D-~lqELaaIQq-~g~rria~lGsRhv~~ 83 (213)
+| ++++|..|++ .||..|+++||-.+..
T Consensus 97 l~~ia~~l~~i~~~~G~~si~~~~sg~~~~ 126 (802)
T 3ml1_A 97 FDEMERQFKRVLKEKGPTAVGMFGSGQWTV 126 (802)
T ss_dssp HHHHHHHHHHHHHHTCGGGEEEEECTTSCH
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCCCCch
Confidence 56 6788888765 6999999999877654
No 113
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=29.00 E-value=35 Score=27.01 Aligned_cols=37 Identities=22% Similarity=0.111 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHH-------HhcC-ceeecCCCCchHHHHHhhhh
Q 028143 85 HQELIEILSYALV-------ITKN-HIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 85 hq~LIEllsyAlv-------l~gn-~i~TSGA~GtNaAvIRGalr 121 (213)
+..+-|.++.-+. -..+ -++|+|++..+.++++..++
T Consensus 65 ~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~ 109 (389)
T 1gd9_A 65 LLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLK 109 (389)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCC
Confidence 3455555554442 1246 78999999988888888753
No 114
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=28.99 E-value=18 Score=34.21 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhh
Q 028143 86 QELIEILSYALVITKNHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 86 q~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGal 120 (213)
..+-|.++..+-....-++|||+++.|.++|++.+
T Consensus 176 ~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~ 210 (730)
T 1c4k_A 176 VAAEKHAARVYNADKTYFVLGGSSNANNTVTSALV 210 (730)
T ss_dssp HHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhc
Confidence 34444444333322223345555555555555443
No 115
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=28.90 E-value=17 Score=31.21 Aligned_cols=9 Identities=22% Similarity=0.538 Sum_probs=8.1
Q ss_pred eeecCCCCc
Q 028143 103 IYTSGASGT 111 (213)
Q Consensus 103 i~TSGA~Gt 111 (213)
+||||+||.
T Consensus 188 ~~TSGTTG~ 196 (539)
T 1mdb_A 188 QLSGGSTGL 196 (539)
T ss_dssp EECCCSSSS
T ss_pred EeCCCcCCC
Confidence 799999995
No 116
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=28.88 E-value=38 Score=27.04 Aligned_cols=17 Identities=12% Similarity=-0.056 Sum_probs=13.1
Q ss_pred ecCCCCchHHHHHhhhh
Q 028143 105 TSGASGTNAAVIRGALR 121 (213)
Q Consensus 105 TSGA~GtNaAvIRGalr 121 (213)
|||+++.+..++++...
T Consensus 102 t~G~~~al~~~~~~l~~ 118 (401)
T 7aat_A 102 GISGTGSLRVGANFLQR 118 (401)
T ss_dssp EEHHHHHHHHHHHHHHH
T ss_pred cCcchHHHHHHHHHHHH
Confidence 88888888888777653
No 117
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=28.84 E-value=92 Score=22.99 Aligned_cols=47 Identities=11% Similarity=0.139 Sum_probs=32.9
Q ss_pred HHHHHHHHHhc---CCceEEEecccccchhHHH-HHHHHHHHHHHhcC--ceeecC
Q 028143 58 YLQELLAIQQQ---GPRAIGFFGTRNMGFMHQE-LIEILSYALVITKN--HIYTSG 107 (213)
Q Consensus 58 ~lqELaaIQq~---g~rria~lGsRhv~~~hq~-LIEllsyAlvl~gn--~i~TSG 107 (213)
+++++...... +.+.|.|.| -=|++|-. |.|++.++-.. |- .+.|.|
T Consensus 55 i~~~i~~~~~~~~~~~~~i~~~G--GEP~l~~~~l~~l~~~~~~~-~~~i~i~Tng 107 (245)
T 3c8f_A 55 LMKEVVTYRHFMNASGGGVTASG--GEAILQAEFVRDWFRACKKE-GIHTCLDTNG 107 (245)
T ss_dssp HHHHHGGGHHHHTSTTCEEEEEE--SCGGGGHHHHHHHHHHHHTT-TCCEEEEECC
T ss_pred HHHHHHHhhhhhcCCCCeEEEEC--CCcCCCHHHHHHHHHHHHHc-CCcEEEEeCC
Confidence 66666555443 468899999 45999988 68999988654 33 455666
No 118
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=28.83 E-value=18 Score=30.66 Aligned_cols=10 Identities=60% Similarity=1.019 Sum_probs=8.6
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 148 i~~TSGTTG~ 157 (511)
T 3e7w_A 148 IIYTSGSTGN 157 (511)
T ss_dssp EEEECCTTSS
T ss_pred EEECCCCCCC
Confidence 4799999996
No 119
>1v9v_A KIAA0561 protein; helix bundle, MAST205, microtubule-associated serine/threonine protein kinase, structural genomics; NMR {Homo sapiens} SCOP: a.29.10.1
Probab=28.62 E-value=15 Score=28.99 Aligned_cols=42 Identities=21% Similarity=0.381 Sum_probs=31.7
Q ss_pred HHhcCCceEEEecccccchhHHHHHHHHHHHHHHhcCceeec
Q 028143 65 IQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 106 (213)
Q Consensus 65 IQq~g~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TS 106 (213)
|....|....=++.--..|+|-|+||+-.-.|--+..-++||
T Consensus 22 i~~~~~~~~~~laDgvl~FiHHQiiElARDCL~KSr~~LITs 63 (114)
T 1v9v_A 22 LTAYAPGARLALADGVLGFIHHQIVELARDCLAKSGENLVTS 63 (114)
T ss_dssp HHHSCBTTTBCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCCH
T ss_pred HHhcCccccccchHHHHHHHHHHHHHHHHHHHHHHHccchHH
Confidence 444555555555666678999999999988888888888886
No 120
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=28.58 E-value=28 Score=27.20 Aligned_cols=19 Identities=11% Similarity=0.179 Sum_probs=11.3
Q ss_pred cCCCCCCCChHHHHhhhhH
Q 028143 155 EKPHNDHLPLIEASRLCNM 173 (213)
Q Consensus 155 E~penD~LpL~eAS~lCN~ 173 (213)
++|..--+|+.+-..+|..
T Consensus 154 ~nptG~~~~l~~i~~l~~~ 172 (376)
T 3f0h_A 154 ETSTAVLYDTMMIGEFCKK 172 (376)
T ss_dssp ETTTTEECCHHHHHHHHHH
T ss_pred cCCcceecCHHHHHHHHHH
Confidence 3445555666666666654
No 121
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=28.56 E-value=15 Score=31.05 Aligned_cols=9 Identities=56% Similarity=1.018 Sum_probs=5.2
Q ss_pred eeecCCCCc
Q 028143 103 IYTSGASGT 111 (213)
Q Consensus 103 i~TSGA~Gt 111 (213)
+||||+||.
T Consensus 159 ~~TSGTTG~ 167 (504)
T 1t5h_X 159 FYTSGTTGL 167 (504)
T ss_dssp EECCC---C
T ss_pred EeCCCCCCC
Confidence 799999995
No 122
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=28.48 E-value=30 Score=28.24 Aligned_cols=23 Identities=22% Similarity=0.277 Sum_probs=15.4
Q ss_pred hcCceeecCCCCchHHHHHhhhh
Q 028143 99 TKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 99 ~gn~i~TSGA~GtNaAvIRGalr 121 (213)
..+-++|+|++..|.++++..++
T Consensus 111 ~~~v~~~~gg~~a~~~~~~~l~~ 133 (435)
T 3piu_A 111 PNHLVLTAGATSANETFIFCLAD 133 (435)
T ss_dssp GGGEEEEEHHHHHHHHHHHHHCC
T ss_pred HHHEEEcCChHHHHHHHHHHhcC
Confidence 34567777777777777776543
No 123
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=28.42 E-value=13 Score=30.70 Aligned_cols=10 Identities=50% Similarity=0.647 Sum_probs=3.1
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||.||.
T Consensus 188 i~~TSGTTG~ 197 (480)
T 3t5a_A 188 LQYTSGSTRT 197 (480)
T ss_dssp EECC------
T ss_pred EEecCCCCCC
Confidence 4799999995
No 124
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=28.42 E-value=15 Score=31.01 Aligned_cols=10 Identities=40% Similarity=0.491 Sum_probs=8.5
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 181 i~~TSGTTG~ 190 (576)
T 3gqw_A 181 LQYTSGSTRF 190 (576)
T ss_dssp EECTTSCSSS
T ss_pred EEeCCCCCCC
Confidence 3789999995
No 125
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=28.41 E-value=34 Score=27.58 Aligned_cols=20 Identities=15% Similarity=0.041 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHhcCceeec
Q 028143 87 ELIEILSYALVITKNHIYTS 106 (213)
Q Consensus 87 ~LIEllsyAlvl~gn~i~TS 106 (213)
+.++++..++...|.+|++.
T Consensus 113 ~al~~~~~~l~~~gd~Vl~~ 132 (418)
T 3rq1_A 113 GGIHHLIHNYTEPGDEVLTA 132 (418)
T ss_dssp HHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEC
Confidence 34444444444444444443
No 126
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=28.18 E-value=58 Score=25.97 Aligned_cols=45 Identities=29% Similarity=0.332 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHhcCC-----ceEEEecccccchhHHHHHHHHHHHHHHhcCceeecC
Q 028143 56 VDYLQELLAIQQQGP-----RAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG 107 (213)
Q Consensus 56 ~D~lqELaaIQq~g~-----rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSG 107 (213)
+|+.......|..++ ++|+|+|.-+|+-. ++..|...|+.++-..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~-------~a~~l~~~g~~V~~~~ 60 (316)
T 2uyy_A 11 VDLGTENLYFQSMGSITPTDKKIGFLGLGLMGSG-------IVSNLLKMGHTVTVWN 60 (316)
T ss_dssp --------------CCCCCSSCEEEECCSHHHHH-------HHHHHHHTTCCEEEEC
T ss_pred cCccccceeecCCCCCCCCCCeEEEEcccHHHHH-------HHHHHHhCCCEEEEEe
Confidence 566666677776554 68999999888753 3445556677765443
No 127
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=28.07 E-value=18 Score=29.82 Aligned_cols=10 Identities=30% Similarity=0.441 Sum_probs=8.7
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-++|||+||.
T Consensus 91 i~~TSGTTG~ 100 (436)
T 3qov_A 91 IHSSSGTTGN 100 (436)
T ss_dssp EEECSCSSSC
T ss_pred EEECCCcCCC
Confidence 4799999996
No 128
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=28.02 E-value=25 Score=27.03 Aligned_cols=36 Identities=11% Similarity=0.159 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHH--hcCceeecCCCCchHHHHHhhh
Q 028143 85 HQELIEILSYALVI--TKNHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 85 hq~LIEllsyAlvl--~gn~i~TSGA~GtNaAvIRGal 120 (213)
...+.|.++.-+-. ..+-++|+|++..+.+++++.+
T Consensus 45 ~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~ 82 (362)
T 3ffr_A 45 YKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV 82 (362)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc
Confidence 34455555554422 2346788888888888888776
No 129
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=27.66 E-value=20 Score=32.04 Aligned_cols=9 Identities=56% Similarity=1.154 Sum_probs=8.1
Q ss_pred eeecCCCCc
Q 028143 103 IYTSGASGT 111 (213)
Q Consensus 103 i~TSGA~Gt 111 (213)
+||||+||.
T Consensus 262 lyTSGTTG~ 270 (652)
T 1pg4_A 262 LYTSGSTGK 270 (652)
T ss_dssp EEECCSSSS
T ss_pred EeccCCCCC
Confidence 799999995
No 130
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=27.51 E-value=25 Score=32.96 Aligned_cols=19 Identities=37% Similarity=0.576 Sum_probs=14.2
Q ss_pred eeecCC--CCchHHHHHhhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALRA 122 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalra 122 (213)
|+|||+ .|.||| |||+.|.
T Consensus 77 IltsGGdaPGmNa~-Ir~vv~~ 97 (555)
T 2f48_A 77 IILSGGPAPGGHNV-ISGVFDA 97 (555)
T ss_dssp EEEBSSCCTTHHHH-HHHHHHH
T ss_pred EECcCCCcHhHHHH-HHHHHHH
Confidence 579998 699975 4777655
No 131
>3k12_A Uncharacterized protein A6V7T0; structural genomics, unknown function, PSI-2, protein struct initiative; 1.49A {Pseudomonas aeruginosa}
Probab=27.41 E-value=10 Score=27.97 Aligned_cols=16 Identities=19% Similarity=0.501 Sum_probs=13.1
Q ss_pred HhcCceeecCCCCchH
Q 028143 98 ITKNHIYTSGASGTNA 113 (213)
Q Consensus 98 l~gn~i~TSGA~GtNa 113 (213)
..||.||+||-.|.+.
T Consensus 16 ~~g~~vfvSGq~~~d~ 31 (122)
T 3k12_A 16 LHGNTVYIGGQVADDP 31 (122)
T ss_dssp EETTEEEEEEECCSST
T ss_pred EECCEEEEeeccCCCC
Confidence 4589999999888753
No 132
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=27.40 E-value=48 Score=27.16 Aligned_cols=87 Identities=11% Similarity=0.056 Sum_probs=56.5
Q ss_pred hhHHHHHHHHHhcCCceEEEecccccchhHHHHHHHHH------------------HHHHHhcCceeecCCCCchHHHHH
Q 028143 56 VDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILS------------------YALVITKNHIYTSGASGTNAAVIR 117 (213)
Q Consensus 56 ~D~lqELaaIQq~g~rria~lGsRhv~~~hq~LIElls------------------yAlvl~gn~i~TSGA~GtNaAvIR 117 (213)
.|+++=|...++.+ ++||++|..|+..--..+-+++. ..+...|-.++--|+..++.|-
T Consensus 93 ~Dil~aL~~a~~~~-~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~vVVG~~~~~~~A~-- 169 (225)
T 2pju_A 93 YDVLQFLAKAGKLT-SSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAE-- 169 (225)
T ss_dssp HHHHHHHHHTTCTT-SCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEESHHHHHHHH--
T ss_pred HHHHHHHHHHHhhC-CcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHH--
Confidence 58999999998876 58999999998776555544443 3455667777777766666653
Q ss_pred hhhhhcCCCceeEeecccccCCChhHHHHHHHhhhHhcC
Q 028143 118 GALRAERPDLLTVILPQSLKKQPPESQELLAKVKTVIEK 156 (213)
Q Consensus 118 Galrae~p~lLTViLPQSL~kQp~EsrelLe~V~~lvE~ 156 (213)
+-.+=.|++- | ..-.+.-+++-.++.+.
T Consensus 170 ------~~Gl~~vlI~-s----~eSI~~Ai~eA~~l~~~ 197 (225)
T 2pju_A 170 ------EAGMTGIFIY-S----AATVRQAFSDALDMTRM 197 (225)
T ss_dssp ------HTTSEEEESS-C----HHHHHHHHHHHHHHHHH
T ss_pred ------HcCCcEEEEC-C----HHHHHHHHHHHHHHHHH
Confidence 3334445554 4 14445566666665554
No 133
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=27.28 E-value=18 Score=31.05 Aligned_cols=10 Identities=40% Similarity=0.687 Sum_probs=7.9
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 185 i~~TSGTTG~ 194 (549)
T 3g7s_A 185 IPYTGGTTGM 194 (549)
T ss_dssp CCEECCCCC-
T ss_pred EEECCCccCC
Confidence 3799999995
No 134
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=26.94 E-value=18 Score=30.98 Aligned_cols=10 Identities=60% Similarity=1.056 Sum_probs=5.9
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||.||.
T Consensus 180 i~~TSGTTG~ 189 (562)
T 3ite_A 180 LLYTSGSTGT 189 (562)
T ss_dssp EEEECC---C
T ss_pred EEECCCCCCC
Confidence 4899999996
No 135
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=26.92 E-value=17 Score=30.71 Aligned_cols=10 Identities=50% Similarity=0.896 Sum_probs=5.7
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 150 i~~TSGTTG~ 159 (521)
T 3l8c_A 150 IIFTSGTTGQ 159 (521)
T ss_dssp EEECCC---C
T ss_pred EEEcCCCCCC
Confidence 4799999995
No 136
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=26.88 E-value=2.9e+02 Score=23.43 Aligned_cols=140 Identities=19% Similarity=0.196 Sum_probs=79.8
Q ss_pred hcccceeeeccccCCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhcCc---eeecCCCC
Q 028143 39 VEGSGAVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNH---IYTSGASG 110 (213)
Q Consensus 39 ~~~~~~v~~~~~~~~p~~D--~lqELaa-IQq~g~rria~lGsR--hv~~~hq~LIEllsyAlvl~gn~---i~TSGA~G 110 (213)
..|.-..+.++++.--++| -++.|.. +-+.|-.-|.++||- -..+.+.+-.+++..+.-..+.+ |+-.|+..
T Consensus 35 ~~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s 114 (332)
T 2r8w_A 35 FKGLSAFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALR 114 (332)
T ss_dssp GCEEEECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSS
T ss_pred cCCeeEEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 4676667778876433455 4555555 446899999999984 44456666666666666555543 34455555
Q ss_pred chHHH--HHhhhhhcCCCceeEeecccccCCC-hhHHHHHHHhhhHhcCCC---------CCCCChHHHHhhhhHHHHhh
Q 028143 111 TNAAV--IRGALRAERPDLLTVILPQSLKKQP-PESQELLAKVKTVIEKPH---------NDHLPLIEASRLCNMDIISH 178 (213)
Q Consensus 111 tNaAv--IRGalrae~p~lLTViLPQSL~kQp-~EsrelLe~V~~lvE~pe---------nD~LpL~eAS~lCN~eIisr 178 (213)
|.-++ .|-|-++ ..+-+-|+-|- ..|-+ .+..+-.+.|..-+..|- .-.|+...-.+|+ +
T Consensus 115 t~eai~la~~A~~~-Gadavlv~~P~-Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La------~ 186 (332)
T 2r8w_A 115 TDEAVALAKDAEAA-GADALLLAPVS-YTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLA------Y 186 (332)
T ss_dssp HHHHHHHHHHHHHH-TCSEEEECCCC-SSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHH------T
T ss_pred HHHHHHHHHHHHhc-CCCEEEECCCC-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH------c
Confidence 55544 4555555 67777666554 44422 223334445544444441 2356666555554 2
Q ss_pred hceeeeEe
Q 028143 179 VQQVICFA 186 (213)
Q Consensus 179 ~qQlIcFA 186 (213)
+..++.+=
T Consensus 187 ~pnIvgiK 194 (332)
T 2r8w_A 187 IPNIRAIK 194 (332)
T ss_dssp STTEEEEE
T ss_pred CCCEEEEE
Confidence 45565543
No 137
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=26.85 E-value=37 Score=27.78 Aligned_cols=19 Identities=21% Similarity=0.111 Sum_probs=9.4
Q ss_pred CceeecCCCCchHHHHHhh
Q 028143 101 NHIYTSGASGTNAAVIRGA 119 (213)
Q Consensus 101 n~i~TSGA~GtNaAvIRGa 119 (213)
+-++|||++..+.++++..
T Consensus 110 ~i~~t~G~~~al~~~~~~l 128 (425)
T 2r2n_A 110 DLCVTSGSQQGLCKVFEMI 128 (425)
T ss_dssp EEEEESSHHHHHHHHHHHH
T ss_pred cEEEeCcHHHHHHHHHHHh
Confidence 4455555555444444444
No 138
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=26.81 E-value=45 Score=26.33 Aligned_cols=18 Identities=11% Similarity=0.195 Sum_probs=9.8
Q ss_pred eeecCCCCchHHHHHhhh
Q 028143 103 IYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 103 i~TSGA~GtNaAvIRGal 120 (213)
++|+|++..+.+++++++
T Consensus 68 ~~~~sgt~al~~~~~~~~ 85 (411)
T 3nnk_A 68 LVDGTSRAGIEAILVSAI 85 (411)
T ss_dssp EEESCHHHHHHHHHHHHC
T ss_pred EECCCcHHHHHHHHHHhc
Confidence 445555555555566554
No 139
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=26.79 E-value=31 Score=28.24 Aligned_cols=44 Identities=20% Similarity=0.129 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHHHH--HhcCceeecCCCCchHHHHHhhhhhcCCC
Q 028143 83 FMHQELIEILSYALV--ITKNHIYTSGASGTNAAVIRGALRAERPD 126 (213)
Q Consensus 83 ~~hq~LIEllsyAlv--l~gn~i~TSGA~GtNaAvIRGalrae~p~ 126 (213)
-.+..|.|.++.-+- ...+-++|+|++..|.++|+.+.....++
T Consensus 86 ~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~ 131 (439)
T 3dxv_A 86 APAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRS 131 (439)
T ss_dssp HHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCC
Confidence 456777777766542 21578999999999999999875543443
No 140
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=26.69 E-value=37 Score=27.09 Aligned_cols=19 Identities=0% Similarity=-0.207 Sum_probs=10.5
Q ss_pred cCCCCCCCChHHHHhhhhH
Q 028143 155 EKPHNDHLPLIEASRLCNM 173 (213)
Q Consensus 155 E~penD~LpL~eAS~lCN~ 173 (213)
.+|...-.++.+-..+|.+
T Consensus 151 ~n~tG~~~~~~~i~~l~~~ 169 (391)
T 3dr4_A 151 VHLYGQICDMDPILEVARR 169 (391)
T ss_dssp BCGGGCCCCHHHHHHHHHH
T ss_pred ECCCCChhhHHHHHHHHHH
Confidence 4455455566666666654
No 141
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=26.68 E-value=49 Score=26.48 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=24.4
Q ss_pred ccchhHHHHHHHHHHHHHHhcCceeecCCCCchH
Q 028143 80 NMGFMHQELIEILSYALVITKNHIYTSGASGTNA 113 (213)
Q Consensus 80 hv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNa 113 (213)
.+|=-...|.+.+..|+...-.-|+|||++|...
T Consensus 70 iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 70 AVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp EECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred EeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 3343456777888877654567899999999754
No 142
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=26.57 E-value=29 Score=29.55 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHh---cCceeecCCCCchHHHHHhhhh
Q 028143 85 HQELIEILSYALVIT---KNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 85 hq~LIEllsyAlvl~---gn~i~TSGA~GtNaAvIRGalr 121 (213)
-+++++.++.-+-.. ++-++|||||..|..+++++..
T Consensus 134 e~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~ 173 (504)
T 2okj_A 134 EQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARY 173 (504)
T ss_dssp HHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHH
Confidence 455666666665443 4679999999999999998853
No 143
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=26.52 E-value=36 Score=26.90 Aligned_cols=20 Identities=20% Similarity=0.202 Sum_probs=13.4
Q ss_pred cCceeecCCCCchHHHHHhh
Q 028143 100 KNHIYTSGASGTNAAVIRGA 119 (213)
Q Consensus 100 gn~i~TSGA~GtNaAvIRGa 119 (213)
.+-++|+|++..+.++++.+
T Consensus 91 ~~v~~~~g~t~a~~~~~~~~ 110 (420)
T 1t3i_A 91 REIVYTRNATEAINLVAYSW 110 (420)
T ss_dssp GGEEEESSHHHHHHHHHHHT
T ss_pred CeEEEcCChHHHHHHHHHHh
Confidence 34567777777777777766
No 144
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=26.50 E-value=21 Score=34.81 Aligned_cols=9 Identities=56% Similarity=1.125 Sum_probs=8.2
Q ss_pred eeecCCCCc
Q 028143 103 IYTSGASGT 111 (213)
Q Consensus 103 i~TSGA~Gt 111 (213)
|||||+||.
T Consensus 613 iyTSGSTG~ 621 (1304)
T 2vsq_A 613 MYTSGTTGK 621 (1304)
T ss_dssp EEECCSSSS
T ss_pred EeCCCCCCC
Confidence 799999995
No 145
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=26.34 E-value=33 Score=27.42 Aligned_cols=21 Identities=19% Similarity=0.240 Sum_probs=14.2
Q ss_pred HhcCCCC---CCCChHHHHhhhhH
Q 028143 153 VIEKPHN---DHLPLIEASRLCNM 173 (213)
Q Consensus 153 lvE~pen---D~LpL~eAS~lCN~ 173 (213)
+++.|.| .-+|+.+-..+|.+
T Consensus 183 ~~~~~~nptG~~~~l~~i~~l~~~ 206 (401)
T 2bwn_A 183 AFESVYSMDGDFGPIKEICDIAEE 206 (401)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHH
T ss_pred EEecCcCCCCCcCCHHHHHHHHHH
Confidence 4566665 35788777778765
No 146
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=26.28 E-value=33 Score=27.51 Aligned_cols=36 Identities=33% Similarity=0.546 Sum_probs=20.9
Q ss_pred CCCChhHHHHH-HHHHhcCCceEEEecccc---cchhHHH
Q 028143 52 PVPDVDYLQEL-LAIQQQGPRAIGFFGTRN---MGFMHQE 87 (213)
Q Consensus 52 ~~p~~D~lqEL-aaIQq~g~rria~lGsRh---v~~~hq~ 87 (213)
++|=+...... .++...|.||||+|||+- -++....
T Consensus 99 ~iPvi~i~~~~~~~a~~~~~~rVgvLaT~~T~~s~~y~~~ 138 (231)
T 3ojc_A 99 GLPLLHIADATAVQIKQQGIDKIGLLGTRYTMEQGFYRGR 138 (231)
T ss_dssp CSCBCCHHHHHHHHHHHTTCCEEEEESCHHHHHSTTTHHH
T ss_pred CCCEeccHHHHHHHHHHcCCCEEEEEcCHHHhhchHHHHH
Confidence 45544433322 234457899999999874 4454433
No 147
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=26.17 E-value=26 Score=34.53 Aligned_cols=18 Identities=44% Similarity=0.427 Sum_probs=13.9
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALR 121 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalr 121 (213)
|+|||+ .|.||| |||+.|
T Consensus 398 IltsGGdapGmNaa-Iravv~ 417 (787)
T 3o8o_A 398 IVHVGAPSAALNAA-TRAATL 417 (787)
T ss_dssp EEEESSCCSSHHHH-HHHHHH
T ss_pred EEccCCCCHHHHHH-HHHHHH
Confidence 689998 899975 566655
No 148
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=26.09 E-value=37 Score=27.48 Aligned_cols=34 Identities=12% Similarity=0.013 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhh
Q 028143 85 HQELIEILSYALVITKNHIYTSGASGTNAAVIRGA 119 (213)
Q Consensus 85 hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGa 119 (213)
+..+-|.++.-+-. .+-++|+|++..+.+++++.
T Consensus 34 ~~~l~~~la~~~~~-~~v~~~~ggt~al~~~~~~l 67 (394)
T 1o69_A 34 VNRFEQSVKDYSKS-ENALALNSATAALHLALRVA 67 (394)
T ss_dssp HHHHHHHHHHHHCC-SEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHc
Confidence 34444444433321 34556666666555566554
No 149
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=25.98 E-value=37 Score=27.03 Aligned_cols=20 Identities=0% Similarity=-0.169 Sum_probs=12.0
Q ss_pred hcCCCCCCCChHHHHhhhhH
Q 028143 154 IEKPHNDHLPLIEASRLCNM 173 (213)
Q Consensus 154 vE~penD~LpL~eAS~lCN~ 173 (213)
+++|...-.++.+-..+|..
T Consensus 129 ~~~~~G~~~~~~~i~~la~~ 148 (367)
T 3nyt_A 129 PVSLYGQCADFDAINAIASK 148 (367)
T ss_dssp CBCGGGCCCCHHHHHHHHHH
T ss_pred eeCCccChhhHHHHHHHHHH
Confidence 44555555666666667655
No 150
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=25.80 E-value=35 Score=27.01 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHH-hcCceeecCCCCchHHHHHhhh
Q 028143 85 HQELIEILSYALVI-TKNHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 85 hq~LIEllsyAlvl-~gn~i~TSGA~GtNaAvIRGal 120 (213)
+..|.|.++.-+-. ..+-++|+|++..+.++++.++
T Consensus 63 ~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~ 99 (381)
T 1v2d_A 63 LPALREALAEEFAVEPESVVVTSGATEALYVLLQSLV 99 (381)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhC
Confidence 45555555544322 2356777777777777777764
No 151
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=25.78 E-value=47 Score=25.36 Aligned_cols=51 Identities=14% Similarity=0.216 Sum_probs=30.4
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHH-HhcCceeecCCCCchH
Q 028143 58 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALV-ITKNHIYTSGASGTNA 113 (213)
Q Consensus 58 ~lqELaaIQq~g~rria~lGsRhv~~~hq~LIEllsyAlv-l~gn~i~TSGA~GtNa 113 (213)
++.++ +++.|-.-+. ...+|=-...|.+.+..|+. ..-.-|+|||++|...
T Consensus 35 ~l~~~--L~~~G~~v~~---~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~ 86 (169)
T 1y5e_A 35 LLHEL--LKEAGHKVTS---YEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGITK 86 (169)
T ss_dssp HHHHH--HHHHTCEEEE---EEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSST
T ss_pred HHHHH--HHHCCCeEeE---EEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC
Confidence 55544 3445653221 12333334667777777765 2457899999999763
No 152
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=25.77 E-value=17 Score=31.24 Aligned_cols=10 Identities=30% Similarity=0.571 Sum_probs=3.7
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 195 i~~TSGTTG~ 204 (550)
T 3rix_A 195 IMNSSGSTGL 204 (550)
T ss_dssp EEEC-----C
T ss_pred EEECCCcccC
Confidence 4799999995
No 153
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=25.75 E-value=19 Score=30.44 Aligned_cols=10 Identities=60% Similarity=1.019 Sum_probs=5.1
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 149 i~~TSGTTG~ 158 (512)
T 3fce_A 149 IIYTSGSTGN 158 (512)
T ss_dssp EEEECC----
T ss_pred EEECCCCCCC
Confidence 4799999995
No 154
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=25.72 E-value=38 Score=26.97 Aligned_cols=38 Identities=11% Similarity=-0.053 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhh
Q 028143 83 FMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 83 ~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalr 121 (213)
-.+..+.|.++.-+- ..+-++|||++..|.++|+.+..
T Consensus 78 ~~~~~l~~~la~~~g-~~~v~~~~~gt~a~~~al~~~~~ 115 (392)
T 3ruy_A 78 DQLGPWYEKVAKLTN-KEMVLPMNTGAEAVETAIKTARR 115 (392)
T ss_dssp TTHHHHHHHHHHHHT-CSEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-CCEEEEeCcHHHHHHHHHHHHHH
Confidence 356777777776553 56788999999999999996554
No 155
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=25.71 E-value=23 Score=29.33 Aligned_cols=10 Identities=30% Similarity=0.425 Sum_probs=8.5
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-++|||.||.
T Consensus 97 i~~TSGTTG~ 106 (443)
T 2y4o_A 97 VHASSGTTGK 106 (443)
T ss_dssp EEEECCSSSS
T ss_pred EEECCCCCCC
Confidence 4689999996
No 156
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=25.71 E-value=21 Score=31.16 Aligned_cols=9 Identities=56% Similarity=0.881 Sum_probs=8.2
Q ss_pred eeecCCCCc
Q 028143 103 IYTSGASGT 111 (213)
Q Consensus 103 i~TSGA~Gt 111 (213)
+||||+||.
T Consensus 212 ~~TSGTTG~ 220 (570)
T 3c5e_A 212 YFTSGTSGL 220 (570)
T ss_dssp EECCCSSSS
T ss_pred EECCCCCCC
Confidence 799999995
No 157
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=25.65 E-value=48 Score=26.56 Aligned_cols=23 Identities=17% Similarity=0.274 Sum_probs=18.8
Q ss_pred cCceeecCCCCchHHHHHhhhhh
Q 028143 100 KNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 100 gn~i~TSGA~GtNaAvIRGalra 122 (213)
.+-++|||++..+.+++++.++.
T Consensus 92 ~~i~~~~g~~~a~~~~~~~~~~~ 114 (422)
T 3fvs_A 92 RNVLVTVGGYGALFTAFQALVDE 114 (422)
T ss_dssp HHEEEESHHHHHHHHHHHHHCCT
T ss_pred CcEEEECChHHHHHHHHHHHcCC
Confidence 47889999998888889887544
No 158
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=25.58 E-value=17 Score=30.84 Aligned_cols=9 Identities=44% Similarity=1.117 Sum_probs=3.3
Q ss_pred eeecCCCCc
Q 028143 103 IYTSGASGT 111 (213)
Q Consensus 103 i~TSGA~Gt 111 (213)
+||||+||.
T Consensus 189 ~~TSGTTG~ 197 (529)
T 2v7b_A 189 LYSSGSTGK 197 (529)
T ss_dssp EEC-----C
T ss_pred EECCCCCCC
Confidence 799999995
No 159
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=25.56 E-value=33 Score=27.90 Aligned_cols=21 Identities=10% Similarity=0.131 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHhcCceeec
Q 028143 86 QELIEILSYALVITKNHIYTS 106 (213)
Q Consensus 86 q~LIEllsyAlvl~gn~i~TS 106 (213)
++.++++..++...|.+|++.
T Consensus 123 ~~al~~~~~~l~~~gd~Vl~~ 143 (430)
T 2x5f_A 123 THGLSLVGDLFVNQDDTILLP 143 (430)
T ss_dssp HHHHHHHHHHHCCTTCEEEEE
T ss_pred hHHHHHHHHHHhCCCCEEEEc
Confidence 566777777776666666655
No 160
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=25.55 E-value=1.1e+02 Score=27.64 Aligned_cols=27 Identities=15% Similarity=0.402 Sum_probs=20.6
Q ss_pred hh-HHHHHHHHHh-cCCceEEEecccccc
Q 028143 56 VD-YLQELLAIQQ-QGPRAIGFFGTRNMG 82 (213)
Q Consensus 56 ~D-~lqELaaIQq-~g~rria~lGsRhv~ 82 (213)
+| +++.|..+++ .|+..|+++|+....
T Consensus 85 l~~ia~~l~~~~~~~G~~~i~~~~~~~~~ 113 (723)
T 2nap_A 85 LDLMASRFRSSIDMYGPNSVAWYGSGQCL 113 (723)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEECTTSC
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEeCCccc
Confidence 56 6678877765 599999999886554
No 161
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=25.45 E-value=35 Score=26.20 Aligned_cols=20 Identities=30% Similarity=0.400 Sum_probs=12.8
Q ss_pred HhcCCCC---CCCChHHHHhhhh
Q 028143 153 VIEKPHN---DHLPLIEASRLCN 172 (213)
Q Consensus 153 lvE~pen---D~LpL~eAS~lCN 172 (213)
++..|.| .-+|+.+-.++|.
T Consensus 140 ~i~~p~nptG~~~~~~~l~~l~~ 162 (337)
T 3p1t_A 140 VLANPSNPTGQALSAGELDQLRQ 162 (337)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEeCCCCCCCCCCCHHHHHHHHH
Confidence 4555555 5677777777764
No 162
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=25.38 E-value=20 Score=30.90 Aligned_cols=10 Identities=30% Similarity=0.607 Sum_probs=6.5
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 196 i~~TSGTTG~ 205 (544)
T 3o83_A 196 FQLSGGSTGT 205 (544)
T ss_dssp EEECCC--CC
T ss_pred EEECCCcccC
Confidence 3699999995
No 163
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=25.36 E-value=1.8e+02 Score=20.34 Aligned_cols=64 Identities=13% Similarity=0.160 Sum_probs=35.5
Q ss_pred CceEEEecccccc---hh-HHHHHHHHHHHHHHh--cCceeecCCCCchHHH----HHhhhhhcCCCceeEeec
Q 028143 70 PRAIGFFGTRNMG---FM-HQELIEILSYALVIT--KNHIYTSGASGTNAAV----IRGALRAERPDLLTVILP 133 (213)
Q Consensus 70 ~rria~lGsRhv~---~~-hq~LIEllsyAlvl~--gn~i~TSGA~GtNaAv----IRGalrae~p~lLTViLP 133 (213)
.++|.++|.-..- .. ..-....++..|... +-.++..|-+|.++.- +.-.+...+|+++.|.+-
T Consensus 2 ~~~i~~~GDSit~G~g~~~~~~~~~~l~~~l~~~~~~~~v~n~g~~G~~~~~~~~~~~~~~~~~~pd~vvi~~G 75 (185)
T 3hp4_A 2 DNTILILGDXLSAAYGLQQEEGWVKLLQDKYDAEQSDIVLINASISGETSGGALRRLDALLEQYEPTHVLIELG 75 (185)
T ss_dssp CEEEEEEECTTTTTTTSCGGGSHHHHHHHHHHHTTCCEEEEECCCTTCCHHHHHHHHHHHHHHHCCSEEEEECC
T ss_pred CCeEEEECCcccccCCCCCcccHHHHHHHHHHhcCCcEEEEECCcCCccHHHHHHHHHHHHhhcCCCEEEEEee
Confidence 4678888854321 11 122334455555443 3456667777776643 333444459999888753
No 164
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=25.34 E-value=23 Score=31.86 Aligned_cols=9 Identities=56% Similarity=1.173 Sum_probs=8.1
Q ss_pred eeecCCCCc
Q 028143 103 IYTSGASGT 111 (213)
Q Consensus 103 i~TSGA~Gt 111 (213)
+||||+||.
T Consensus 268 lyTSGTTG~ 276 (663)
T 1ry2_A 268 LYTSGSTGA 276 (663)
T ss_dssp EEECCSSSS
T ss_pred EeccCCCCC
Confidence 799999994
No 165
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=25.26 E-value=38 Score=27.36 Aligned_cols=22 Identities=23% Similarity=0.232 Sum_probs=17.0
Q ss_pred cCceeecCCCCchHHHHHhhhh
Q 028143 100 KNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 100 gn~i~TSGA~GtNaAvIRGalr 121 (213)
.+-++|+|++..+.++++..++
T Consensus 100 ~~v~~t~g~~~a~~~~~~~~~~ 121 (412)
T 2x5d_A 100 SEAIVTIGSKEGLAHLMLATLD 121 (412)
T ss_dssp TSEEEESCHHHHHHHHHHHHCC
T ss_pred cCEEEcCChHHHHHHHHHHhCC
Confidence 4778888888888888887643
No 166
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=25.19 E-value=30 Score=28.01 Aligned_cols=21 Identities=29% Similarity=0.303 Sum_probs=15.8
Q ss_pred CceeecCCCCchHHHHHhhhh
Q 028143 101 NHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 101 n~i~TSGA~GtNaAvIRGalr 121 (213)
+-++|+|++..+.++++..++
T Consensus 103 ~v~~~~g~~~a~~~~~~~~~~ 123 (429)
T 1yiz_A 103 EVLVTVGAYEALYATIQGHVD 123 (429)
T ss_dssp SEEEESHHHHHHHHHHHHHCC
T ss_pred CEEEecChHHHHHHHHHHhcC
Confidence 677888888777777877653
No 167
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=25.18 E-value=21 Score=28.82 Aligned_cols=10 Identities=20% Similarity=0.415 Sum_probs=5.5
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-++|||.||.
T Consensus 96 i~~TSGTTG~ 105 (369)
T 3hgu_A 96 VYESGGTTGA 105 (369)
T ss_dssp EEEECC---C
T ss_pred EEECCCCCCC
Confidence 4699999995
No 168
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=25.16 E-value=23 Score=31.06 Aligned_cols=10 Identities=30% Similarity=0.627 Sum_probs=8.6
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 230 i~~TSGTTG~ 239 (580)
T 3etc_A 230 VYFSSGTAGF 239 (580)
T ss_dssp EEEECCSSSS
T ss_pred EEEeCCCCCC
Confidence 4799999995
No 169
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=25.01 E-value=38 Score=26.76 Aligned_cols=20 Identities=10% Similarity=-0.207 Sum_probs=12.2
Q ss_pred hcCCCCCCCChHHHHhhhhH
Q 028143 154 IEKPHNDHLPLIEASRLCNM 173 (213)
Q Consensus 154 vE~penD~LpL~eAS~lCN~ 173 (213)
+.+|...-.++.+-..+|.+
T Consensus 133 ~~~~~G~~~~~~~i~~l~~~ 152 (393)
T 1mdo_A 133 PVHYAGAPADLDAIYALGER 152 (393)
T ss_dssp CBCGGGCCCCHHHHHHHHHH
T ss_pred EeCCCCCcCCHHHHHHHHHH
Confidence 34555555666666667654
No 170
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=24.98 E-value=49 Score=26.12 Aligned_cols=20 Identities=10% Similarity=0.046 Sum_probs=11.6
Q ss_pred CceeecCCCCchHHHHHhhh
Q 028143 101 NHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 101 n~i~TSGA~GtNaAvIRGal 120 (213)
+-++|||++..+.++++..+
T Consensus 89 ~v~~~~g~~~a~~~~~~~l~ 108 (376)
T 2dou_A 89 EALALIGSQEGLAHLLLALT 108 (376)
T ss_dssp SEEEESSHHHHHHHHHHHHC
T ss_pred cEEEcCCcHHHHHHHHHHhc
Confidence 55666666655555565543
No 171
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=24.89 E-value=30 Score=27.69 Aligned_cols=36 Identities=14% Similarity=0.027 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHH-HhcCceeecCCCCchHHHHHhhh
Q 028143 85 HQELIEILSYALV-ITKNHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 85 hq~LIEllsyAlv-l~gn~i~TSGA~GtNaAvIRGal 120 (213)
+..|-|.++.-+- -..+-++|||++..+.++++..+
T Consensus 76 ~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~ 112 (397)
T 2zyj_A 76 YAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFL 112 (397)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhC
Confidence 3455555554442 12456777777777766777654
No 172
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=24.78 E-value=50 Score=25.85 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=22.6
Q ss_pred cCCceEEEecccccchhHHHHHHHHHHHHHHhcCceeec
Q 028143 68 QGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 106 (213)
Q Consensus 68 ~g~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TS 106 (213)
-..++|||+|.-+|+- -|+..|+..||.++-.
T Consensus 17 ~~~~kIgiIG~G~mG~-------alA~~L~~~G~~V~~~ 48 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGR-------TMAGALADLGHEVTIG 48 (245)
T ss_dssp --CCEEEEECCSHHHH-------HHHHHHHHTTCEEEEE
T ss_pred cCCCeEEEECCCHHHH-------HHHHHHHHCCCEEEEE
Confidence 3468999999988874 3566677778877543
No 173
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=24.77 E-value=34 Score=26.81 Aligned_cols=18 Identities=0% Similarity=0.025 Sum_probs=8.7
Q ss_pred CCCCCCCChHHHHhhhhH
Q 028143 156 KPHNDHLPLIEASRLCNM 173 (213)
Q Consensus 156 ~penD~LpL~eAS~lCN~ 173 (213)
+|...-.|+.+-..+|.+
T Consensus 133 n~~G~~~~~~~i~~~~~~ 150 (374)
T 3uwc_A 133 HYTGNIADMPALAKIAKK 150 (374)
T ss_dssp CGGGCCCCHHHHHHHHHH
T ss_pred CCcCCcCCHHHHHHHHHH
Confidence 333344455555555543
No 174
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=24.74 E-value=37 Score=27.58 Aligned_cols=37 Identities=11% Similarity=0.052 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHH----HHh----cCceeecCCCCchHHHHHhhhh
Q 028143 85 HQELIEILSYAL----VIT----KNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 85 hq~LIEllsyAl----vl~----gn~i~TSGA~GtNaAvIRGalr 121 (213)
+..|-|.++.-+ -.. .+-++|+|++..+.++++..++
T Consensus 87 ~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~ 131 (404)
T 2o1b_A 87 KEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVIN 131 (404)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcC
Confidence 345555555444 221 4678888888888888887643
No 175
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=24.68 E-value=52 Score=26.96 Aligned_cols=22 Identities=14% Similarity=0.113 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHhcC----ceeecC
Q 028143 86 QELIEILSYALVITKN----HIYTSG 107 (213)
Q Consensus 86 q~LIEllsyAlvl~gn----~i~TSG 107 (213)
++.+.++..++...|. +|+++.
T Consensus 101 ~~al~~~~~~l~~~Gd~~~~~Vlv~~ 126 (391)
T 3bwn_A 101 TQLCQAAVHALSSLARSQPVSVVAAA 126 (391)
T ss_dssp HHHHHHHHHHHHHTSSSSSEEEEECS
T ss_pred HHHHHHHHHHhcCCCCCCcceEEEcC
Confidence 4556666666655555 555544
No 176
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=24.56 E-value=88 Score=25.42 Aligned_cols=40 Identities=18% Similarity=0.070 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHHHHHH-hcCceeecCCCCchHHHHHhhhhh
Q 028143 83 FMHQELIEILSYALVI-TKNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 83 ~~hq~LIEllsyAlvl-~gn~i~TSGA~GtNaAvIRGalra 122 (213)
-.+..|.|.++.-+-. ..+-++|+||+-.|.++|+.+.+.
T Consensus 72 ~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~ 112 (430)
T 3i4j_A 72 DVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQY 112 (430)
T ss_dssp HHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHH
Confidence 3566777776654321 247789999999999999987753
No 177
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=24.50 E-value=3e+02 Score=22.70 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=54.4
Q ss_pred eeeeccccCCCChh--HHHHHHHH-HhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhcCceeecCCCCchHHH--H
Q 028143 44 AVMVSEFKPVPDVD--YLQELLAI-QQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNHIYTSGASGTNAAV--I 116 (213)
Q Consensus 44 ~v~~~~~~~~p~~D--~lqELaaI-Qq~g~rria~lGsR--hv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAv--I 116 (213)
..+.++++.--++| -++.+..- -+.|-.-|.++||- -..+.+.+-.+++..+.-..+.-|+-.|+..|.-++ .
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gviaGvg~~~t~~ai~la 84 (293)
T 1w3i_A 5 TPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKIIFQVGGLNLDDAIRLA 84 (293)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHH
T ss_pred EEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHH
Confidence 34456665433355 45555553 46899999999984 455667777777776665444434444555555443 3
Q ss_pred HhhhhhcCCCceeEeecccccC
Q 028143 117 RGALRAERPDLLTVILPQSLKK 138 (213)
Q Consensus 117 RGalrae~p~lLTViLPQSL~k 138 (213)
|-|-++ ..+-+-|+-|- ..|
T Consensus 85 ~~A~~~-Gadavlv~~P~-y~~ 104 (293)
T 1w3i_A 85 KLSKDF-DIVGIASYAPY-YYP 104 (293)
T ss_dssp HHGGGS-CCSEEEEECCC-SCS
T ss_pred HHHHhc-CCCEEEEcCCC-CCC
Confidence 334343 56777666564 444
No 178
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=24.48 E-value=23 Score=29.27 Aligned_cols=10 Identities=30% Similarity=0.418 Sum_probs=8.5
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-++|||.||.
T Consensus 95 i~~TSGTTG~ 104 (437)
T 2y27_A 95 IHASSGTTGK 104 (437)
T ss_dssp EEECCCTTSS
T ss_pred EEECCCCCCC
Confidence 4689999995
No 179
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=24.45 E-value=30 Score=28.79 Aligned_cols=37 Identities=24% Similarity=0.230 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHH-------HhcCceeecCCCCchHHHHHhhhh
Q 028143 85 HQELIEILSYALV-------ITKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 85 hq~LIEllsyAlv-------l~gn~i~TSGA~GtNaAvIRGalr 121 (213)
+..|.|-++.-+. -..+-++|+|++..+.++++..++
T Consensus 97 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~ 140 (447)
T 3b46_A 97 RPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLN 140 (447)
T ss_dssp CHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcC
Confidence 4556665555542 123678888888888888888754
No 180
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=24.44 E-value=29 Score=33.98 Aligned_cols=18 Identities=44% Similarity=0.783 Sum_probs=13.8
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALR 121 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalr 121 (213)
|+|||+ .|.|| ||||+.|
T Consensus 20 IltsGGdaPGmNa-aIravvr 39 (762)
T 3o8l_A 20 VLTSGGDAQGMNA-AVRAVVR 39 (762)
T ss_dssp EECCSSCCTTHHH-HHHHHHH
T ss_pred EEccCCCchhHhH-HHHHHHH
Confidence 579996 89997 4577666
No 181
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=24.34 E-value=12 Score=27.59 Aligned_cols=39 Identities=31% Similarity=0.290 Sum_probs=29.1
Q ss_pred eeEeecccccCCChhHHHHHHHhhhHhcCCCCCCCChHH
Q 028143 128 LTVILPQSLKKQPPESQELLAKVKTVIEKPHNDHLPLIE 166 (213)
Q Consensus 128 LTViLPQSL~kQp~EsrelLe~V~~lvE~penD~LpL~e 166 (213)
|.|..|.|=--+.+++|+.|.+=+++.|.+.++..||--
T Consensus 38 lsVf~pEs~l~~~~~~R~~La~eLgl~~~~~~~~~PLL~ 76 (82)
T 2d68_A 38 LAVFQPETSTLQGLEGRENLARDLGIIEAEGTVGGPLLL 76 (82)
T ss_dssp HHHHHHHHTCC---CCHHHHHHHTTCCCCTTTTTSCHHH
T ss_pred HHhhhhccCCCCCCCCHHHHHHHcCCCCCCCCCCCCcHH
Confidence 456666665556788999999999999999999999853
No 182
>3dvo_A Sgrair restriction enzyme; restriction enzyme/DNA complex; HET: DNA; 1.89A {Streptomyces griseus} PDB: 3dpg_A* 3dw9_A* 3mq6_A* 3mqy_A* 3n78_A* 3n7b_A*
Probab=24.15 E-value=1.6e+02 Score=26.79 Aligned_cols=54 Identities=30% Similarity=0.356 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccC----------CChhHHHHHHHhhhHh
Q 028143 85 HQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKK----------QPPESQELLAKVKTVI 154 (213)
Q Consensus 85 hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~k----------Qp~EsrelLe~V~~lv 154 (213)
-+..||=+.-+|-..|=.++|| .||++-|.+|.-|.. -.+|++..|+..-+.+
T Consensus 163 ~re~i~~le~~L~k~Gv~LitS-----------------nPDlviVr~pd~l~n~~~~~ePI~kLt~eN~~~L~t~yq~l 225 (338)
T 3dvo_A 163 SQEVIEEFRAGLRKDGLGLPTS-----------------TPDLAVVVLPEEFQNDEMWREEIAGLTRPNQILLSGAYQRL 225 (338)
T ss_dssp HHHHHHHHHHHHHHTTCBCCCC-----------------CCSEEEEECCGGGTTCGGGGCCCSSCCHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHhhceecccC-----------------CCCEEEEeCCccccChhhhcccccccCchhHHHHHHHHHHH
Confidence 4678888888999999999999 999999999866655 4577888887776666
Q ss_pred c
Q 028143 155 E 155 (213)
Q Consensus 155 E 155 (213)
|
T Consensus 226 e 226 (338)
T 3dvo_A 226 Q 226 (338)
T ss_dssp T
T ss_pred h
Confidence 5
No 183
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=24.01 E-value=29 Score=34.96 Aligned_cols=18 Identities=33% Similarity=0.466 Sum_probs=13.9
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALR 121 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalr 121 (213)
|+|||+ .|.||| |||+.|
T Consensus 576 IltsGGdapGmNaa-Iravv~ 595 (941)
T 3opy_B 576 IINVGAPAGGMNSA-VYSMAT 595 (941)
T ss_dssp EEEESSCCTTHHHH-HHHHHH
T ss_pred EEecCCCcHHHHHH-HHHHHH
Confidence 689995 899985 566665
No 184
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=23.97 E-value=22 Score=30.77 Aligned_cols=10 Identities=40% Similarity=0.863 Sum_probs=8.5
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 219 i~~TSGTTG~ 228 (570)
T 4gr5_A 219 VMFTSGSTGR 228 (570)
T ss_dssp EECCSSCCSS
T ss_pred EEECCcCCCC
Confidence 3799999995
No 185
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=23.91 E-value=46 Score=27.27 Aligned_cols=20 Identities=15% Similarity=0.137 Sum_probs=10.9
Q ss_pred hcCCCCCC----CC---hHHHHhhhhH
Q 028143 154 IEKPHNDH----LP---LIEASRLCNM 173 (213)
Q Consensus 154 vE~penD~----Lp---L~eAS~lCN~ 173 (213)
+|.|.|-. +| |.+-..+|.+
T Consensus 189 ~~~~~np~gG~~~~~~~l~~i~~la~~ 215 (467)
T 1ax4_A 189 STVTCNSAGGQPVSMSNLKEVYEIAKQ 215 (467)
T ss_dssp EESSBTTTTSBCCCHHHHHHHHHHHHH
T ss_pred EeccccCCCccCCChhHHHHHHHHHHH
Confidence 57777654 23 3455566654
No 186
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=23.91 E-value=2.3e+02 Score=21.12 Aligned_cols=32 Identities=6% Similarity=-0.248 Sum_probs=15.8
Q ss_pred HhcCCceEEEecccccchhHHHHHHHHHHHHHH
Q 028143 66 QQQGPRAIGFFGTRNMGFMHQELIEILSYALVI 98 (213)
Q Consensus 66 Qq~g~rria~lGsRhv~~~hq~LIEllsyAlvl 98 (213)
-+.|.|+||+++...- ..++.-.+=...+|..
T Consensus 133 ~~~G~~~i~~i~~~~~-~~~~~R~~gf~~~l~~ 164 (298)
T 3tb6_A 133 LSLGHTHMMGIFKADD-TQGVKRMNGFIQAHRE 164 (298)
T ss_dssp HHTTCCSEEEEEESSS-HHHHHHHHHHHHHHHH
T ss_pred HHCCCCcEEEEcCCCC-ccHHHHHHHHHHHHHH
Confidence 3457777777765443 2333333333344433
No 187
>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus}
Probab=23.87 E-value=1.1e+02 Score=27.82 Aligned_cols=45 Identities=18% Similarity=0.248 Sum_probs=30.0
Q ss_pred hh-HHHHHHHHHh-cCCceEEEecc-ccc-c--hhHHHHHHHHHHHHHHhcCceeec
Q 028143 56 VD-YLQELLAIQQ-QGPRAIGFFGT-RNM-G--FMHQELIEILSYALVITKNHIYTS 106 (213)
Q Consensus 56 ~D-~lqELaaIQq-~g~rria~lGs-Rhv-~--~~hq~LIEllsyAlvl~gn~i~TS 106 (213)
+| +++.|..|++ .|+..|+++++ ++. . ++++.+.. + +..+++.+.
T Consensus 84 l~~ia~~l~~i~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~----~--~G~~n~~~~ 134 (727)
T 2e7z_A 84 LDEIAEKLKKIIAKYGPESLGVSQTEINQQSEYGTLRRFMN----L--LGSPNWTSA 134 (727)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEECGGGTCCCTTHHHHHHH----H--HTCCCEECG
T ss_pred HHHHHHHHHHHHHhhCCcEEEEEeCCCCCccchHHHHHHHH----H--cCCCCccCC
Confidence 56 6788888876 49999999965 333 4 66655543 2 456666663
No 188
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=23.85 E-value=31 Score=27.77 Aligned_cols=22 Identities=9% Similarity=0.069 Sum_probs=15.5
Q ss_pred cCceeecCCCCchHHHHHhhhh
Q 028143 100 KNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 100 gn~i~TSGA~GtNaAvIRGalr 121 (213)
.+-++|+|++..+.++++..++
T Consensus 102 ~~v~~t~g~~~al~~~~~~l~~ 123 (406)
T 1xi9_A 102 DDVRVTAAVTEALQLIFGALLD 123 (406)
T ss_dssp GGEEEESHHHHHHHHHHHHHCC
T ss_pred HHEEEcCChHHHHHHHHHHhCC
Confidence 4667778877777777777643
No 189
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=23.53 E-value=3.2e+02 Score=22.68 Aligned_cols=78 Identities=13% Similarity=0.057 Sum_probs=42.3
Q ss_pred chhHHHHHHHHHHHHHHhcCceeecCC-CCchHHHHHhhhhhcCCCceeEeecccccCCChh-----HHHHHHHh-hhHh
Q 028143 82 GFMHQELIEILSYALVITKNHIYTSGA-SGTNAAVIRGALRAERPDLLTVILPQSLKKQPPE-----SQELLAKV-KTVI 154 (213)
Q Consensus 82 ~~~hq~LIEllsyAlvl~gn~i~TSGA-~GtNaAvIRGalrae~p~lLTViLPQSL~kQp~E-----srelLe~V-~~lv 154 (213)
+|=-.-+--++..|....-.+|+|+|| +|-.+..+--+-+. .-=-.+|++|.......+. -.++++.. .+|+
T Consensus 63 s~K~R~~~~~l~~a~~~G~~~vv~~s~tsGN~g~alA~aa~~-~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~ 141 (342)
T 4d9b_A 63 GNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAK-LGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIE 141 (342)
T ss_dssp CTHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHHH-HTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEE
T ss_pred chHHHhHHHHHHHHHHcCCCEEEEcCCcccHHHHHHHHHHHH-hCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEE
Confidence 344445556677777766688999886 44443222222222 2234689999887665432 23333322 2455
Q ss_pred cCCCCC
Q 028143 155 EKPHND 160 (213)
Q Consensus 155 E~penD 160 (213)
.-|.++
T Consensus 142 ~~~~~~ 147 (342)
T 4d9b_A 142 MCDALT 147 (342)
T ss_dssp ECSCCS
T ss_pred EECchh
Confidence 555543
No 190
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=23.50 E-value=21 Score=31.12 Aligned_cols=9 Identities=67% Similarity=1.195 Sum_probs=3.7
Q ss_pred eeecCCCCc
Q 028143 103 IYTSGASGT 111 (213)
Q Consensus 103 i~TSGA~Gt 111 (213)
+||||+||.
T Consensus 188 ~~TSGTTG~ 196 (563)
T 1amu_A 188 IYTSGTTGN 196 (563)
T ss_dssp EEEC-----
T ss_pred EECCCCCCC
Confidence 799999995
No 191
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=23.47 E-value=43 Score=26.55 Aligned_cols=21 Identities=29% Similarity=0.305 Sum_probs=16.1
Q ss_pred CceeecCCCCchHHHHHhhhh
Q 028143 101 NHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 101 n~i~TSGA~GtNaAvIRGalr 121 (213)
+-++|+|++..+.++++..++
T Consensus 93 ~v~~~~g~~~a~~~~~~~~~~ 113 (386)
T 1u08_A 93 DITVTAGATEALYAAITALVR 113 (386)
T ss_dssp TEEEESSHHHHHHHHHHHHCC
T ss_pred CEEEcCChHHHHHHHHHHhCC
Confidence 678888888888788887643
No 192
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=23.41 E-value=52 Score=24.87 Aligned_cols=51 Identities=20% Similarity=0.369 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhc-CceeecCCCCchH
Q 028143 58 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK-NHIYTSGASGTNA 113 (213)
Q Consensus 58 ~lqELaaIQq~g~rria~lGsRhv~~~hq~LIEllsyAlvl~g-n~i~TSGA~GtNa 113 (213)
++.++ +.+.|-.-+. -..+|=--..|.+.+..+++..+ .-|+|||++|...
T Consensus 44 ~L~~~--L~~~G~~v~~---~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~~ 95 (178)
T 3iwt_A 44 IIKQL--LIENGHKIIG---YSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp HHHHH--HHHTTCEEEE---EEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred HHHHH--HHHCCCEEEE---EEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccCC
Confidence 55544 3456654321 12233333566677777666544 6799999999653
No 193
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=23.30 E-value=58 Score=25.82 Aligned_cols=34 Identities=3% Similarity=-0.055 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHh-cCceeecCCCCchHHHHHhh
Q 028143 86 QELIEILSYALVIT-KNHIYTSGASGTNAAVIRGA 119 (213)
Q Consensus 86 q~LIEllsyAlvl~-gn~i~TSGA~GtNaAvIRGa 119 (213)
..+.|.++.-+-.. .+-++|||++..+.+++++.
T Consensus 72 ~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l 106 (406)
T 3cai_A 72 DAAREAVADLVNADPGGVVLGADRAVLLSLLAEAS 106 (406)
T ss_dssp HHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHH
Confidence 34444444333222 34566666665555555554
No 194
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=23.27 E-value=23 Score=30.54 Aligned_cols=10 Identities=30% Similarity=0.571 Sum_probs=8.5
Q ss_pred ceeecCCCCc
Q 028143 102 HIYTSGASGT 111 (213)
Q Consensus 102 ~i~TSGA~Gt 111 (213)
-+||||+||.
T Consensus 197 i~~TSGTTG~ 206 (548)
T 2d1s_A 197 IMNSSGSTGL 206 (548)
T ss_dssp EECCSSCSSS
T ss_pred EEeCCCCCCC
Confidence 3789999995
No 195
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=23.20 E-value=42 Score=27.07 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHH-hcCceeecCCCCchHHHHHhhhh
Q 028143 86 QELIEILSYALVI-TKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 86 q~LIEllsyAlvl-~gn~i~TSGA~GtNaAvIRGalr 121 (213)
..+.|.++.-+-. ..+-++|||++..+.++++++.+
T Consensus 64 ~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~ 100 (432)
T 3a9z_A 64 NTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVR 100 (432)
T ss_dssp HHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHh
Confidence 5666666665533 25789999999999999999874
No 196
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=23.11 E-value=58 Score=26.62 Aligned_cols=36 Identities=14% Similarity=-0.009 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhh
Q 028143 84 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGA 119 (213)
Q Consensus 84 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGa 119 (213)
.+..|-|.++.-+--..+-++|+|++-.|.++||.|
T Consensus 97 ~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~a 132 (434)
T 2epj_A 97 AEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLA 132 (434)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHH
Confidence 456677777654422356789999999999999986
No 197
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=23.06 E-value=40 Score=26.28 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHh-cCceeecCCCCchHHHHHhh
Q 028143 86 QELIEILSYALVIT-KNHIYTSGASGTNAAVIRGA 119 (213)
Q Consensus 86 q~LIEllsyAlvl~-gn~i~TSGA~GtNaAvIRGa 119 (213)
..+-|.++.-+-.. .+-++|+|++..+.+++++.
T Consensus 62 ~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~ 96 (390)
T 1elu_A 62 AQLRQALAETFNVDPNTITITDNVTTGCDIVLWGL 96 (390)
T ss_dssp HHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCC
Confidence 34444444333211 24567777777777777766
No 198
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=22.95 E-value=31 Score=28.18 Aligned_cols=21 Identities=24% Similarity=0.233 Sum_probs=14.4
Q ss_pred cCceeecCCCCchHHHHHhhh
Q 028143 100 KNHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 100 gn~i~TSGA~GtNaAvIRGal 120 (213)
.+-++|+|++..+.++++..+
T Consensus 110 ~~v~~t~G~~~al~~~~~~l~ 130 (425)
T 1vp4_A 110 DNLIFTVGSQQALDLIGKLFL 130 (425)
T ss_dssp GGEEEEEHHHHHHHHHHHHHC
T ss_pred ccEEEeccHHHHHHHHHHHhC
Confidence 356777777777777777654
No 199
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=22.90 E-value=98 Score=24.50 Aligned_cols=14 Identities=0% Similarity=-0.140 Sum_probs=7.9
Q ss_pred CCCChHHHHhhhhH
Q 028143 160 DHLPLIEASRLCNM 173 (213)
Q Consensus 160 D~LpL~eAS~lCN~ 173 (213)
.-.++.+-..+|.+
T Consensus 138 ~~~~l~~i~~la~~ 151 (388)
T 1b9h_A 138 LMADMDALAKISAD 151 (388)
T ss_dssp CCCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHH
Confidence 34556666666654
No 200
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=22.74 E-value=58 Score=27.98 Aligned_cols=40 Identities=10% Similarity=0.042 Sum_probs=28.2
Q ss_pred cchhHHHHHHHHHHHH---HHhcCceeecCCCCchHHHHHhhh
Q 028143 81 MGFMHQELIEILSYAL---VITKNHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 81 v~~~hq~LIEllsyAl---vl~gn~i~TSGA~GtNaAvIRGal 120 (213)
.+-+++.+.+.+..-. +-..+-++|||+++.+..+++..+
T Consensus 136 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 178 (500)
T 3tcm_A 136 IHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLI 178 (500)
T ss_dssp CHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHc
Confidence 4456666666664321 235678999999999988888876
No 201
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=22.68 E-value=54 Score=29.18 Aligned_cols=64 Identities=16% Similarity=0.161 Sum_probs=44.2
Q ss_pred CCceEEEecccccchhHHHHHHHHHHHHHHhc---------------------CceeecCCCCchHHHHHhhhhhcCCC-
Q 028143 69 GPRAIGFFGTRNMGFMHQELIEILSYALVITK---------------------NHIYTSGASGTNAAVIRGALRAERPD- 126 (213)
Q Consensus 69 g~rria~lGsRhv~~~hq~LIEllsyAlvl~g---------------------n~i~TSGA~GtNaAvIRGalrae~p~- 126 (213)
+.+.+-+||||..-. .+=.+..||....| ||++.....+ .++++-+.+. -|+
T Consensus 137 ~~~~~~~fgtRrt~p---~~~~~~~~A~~iGG~~~tsn~l~~~~~~~~~~GT~~H~~i~~~g~--~~A~~~~~~~-~p~~ 210 (398)
T 2i1o_A 137 GDSPFFSFGIRRMHP---AISPMIDRSAYIGGADGVSGILGAKLIDQDPVGTMPHALSIMLGD--EEAWKLTLEN-TKNG 210 (398)
T ss_dssp TTSCEEECCGGGSCG---GGHHHHHHHHHHTTCSEECCHHHHHHHTSCCCCCCCHHHHHHHCH--HHHHHHHHHT-CCTT
T ss_pred CCCCEEEecCCCCCH---HHHHHHHHHHhcCCceeechHHHHHHcCCCcccchhhHHHHhcCC--HHHHHHHHHh-CCCC
Confidence 456799999998652 23345789988887 8885222112 6777777776 555
Q ss_pred ceeEeecccccC
Q 028143 127 LLTVILPQSLKK 138 (213)
Q Consensus 127 lLTViLPQSL~k 138 (213)
...++|-.+++.
T Consensus 211 ~~~~vlvDT~d~ 222 (398)
T 2i1o_A 211 QKSVLLIDTYMD 222 (398)
T ss_dssp SCCEEECCSSSC
T ss_pred CCEEEEEcCchH
Confidence 678999999964
No 202
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=22.52 E-value=1e+02 Score=25.12 Aligned_cols=56 Identities=13% Similarity=0.033 Sum_probs=29.9
Q ss_pred hhHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccC
Q 028143 83 FMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKK 138 (213)
Q Consensus 83 ~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~k 138 (213)
|=-.-+--++.+|+...-.+|+|.||+.-|.+.-=.+.-+..-=-.+|++|.....
T Consensus 50 ~K~R~a~~~l~~a~~~g~~~vv~~GassGN~g~alA~~a~~~G~~~~iv~p~~~~~ 105 (338)
T 1tzj_A 50 NKTRKLEYLIPEALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNY 105 (338)
T ss_dssp HHHHHHHTTHHHHHHTTCCEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSSC
T ss_pred hHHHHHHHHHHHHHHcCCCEEEEcCCchhHHHHHHHHHHHHhCCceEEEecCCCCc
Confidence 33344444567777555467888765554442221111121223468999987754
No 203
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=22.50 E-value=34 Score=34.43 Aligned_cols=18 Identities=39% Similarity=0.700 Sum_probs=12.9
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALR 121 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalr 121 (213)
|+|||+ .|.||| |||+.|
T Consensus 186 IlTsGGdaPGmNAa-IRaVVr 205 (941)
T 3opy_B 186 VMTSGGDSPGMNPF-VRAVVR 205 (941)
T ss_dssp EEECSSCCTTHHHH-HHHHHH
T ss_pred EEeeCcCchhHHHH-HHHHHH
Confidence 689996 899985 455444
No 204
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=22.38 E-value=40 Score=28.66 Aligned_cols=20 Identities=20% Similarity=0.159 Sum_probs=17.6
Q ss_pred Ccee-ecCCCCchHHHHHhhh
Q 028143 101 NHIY-TSGASGTNAAVIRGAL 120 (213)
Q Consensus 101 n~i~-TSGA~GtNaAvIRGal 120 (213)
+-++ |||+|..+.++|+|.+
T Consensus 70 ~v~f~t~~~T~a~n~~~~~~~ 90 (361)
T 3m5u_A 70 EVLFLQGGASLQFAMIPMNLA 90 (361)
T ss_dssp EEEEESSHHHHHHHHHHHHHC
T ss_pred eEEEEcCcHHHHHHHHHHhcC
Confidence 3466 9999999999999998
No 205
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=22.31 E-value=54 Score=25.87 Aligned_cols=19 Identities=16% Similarity=0.120 Sum_probs=9.6
Q ss_pred CceeecCCCCchHHHHHhh
Q 028143 101 NHIYTSGASGTNAAVIRGA 119 (213)
Q Consensus 101 n~i~TSGA~GtNaAvIRGa 119 (213)
+-++|||++..+.++++.+
T Consensus 78 ~v~~~~g~~~al~~~~~~~ 96 (364)
T 1lc5_A 78 WILAGNGETESIFTVASGL 96 (364)
T ss_dssp GEEEESSHHHHHHHHHHHH
T ss_pred HEEECCCHHHHHHHHHHHc
Confidence 4455555555555555544
No 206
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=22.28 E-value=18 Score=28.57 Aligned_cols=21 Identities=19% Similarity=0.251 Sum_probs=12.3
Q ss_pred HhcCCCCC---CCC---hHHHHhhhhH
Q 028143 153 VIEKPHND---HLP---LIEASRLCNM 173 (213)
Q Consensus 153 lvE~penD---~Lp---L~eAS~lCN~ 173 (213)
+++.|+|- -+| +.+-..+|.+
T Consensus 159 ~~~~~~nptG~~~~~~~l~~i~~la~~ 185 (375)
T 3op7_A 159 CINNANNPTGAVMDRTYLEELVEIASE 185 (375)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHT
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 45655553 367 6666666654
No 207
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=22.26 E-value=33 Score=33.55 Aligned_cols=18 Identities=39% Similarity=0.735 Sum_probs=12.9
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALR 121 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalr 121 (213)
|+|||+ .|.||| |||+.|
T Consensus 8 IltsGGdapGmNaa-Iravvr 27 (766)
T 3o8o_B 8 VMTSGGDAPGMNSN-VRAIVR 27 (766)
T ss_dssp EEEESSCCTTHHHH-HHHHHH
T ss_pred EEeeCCCchhHHHH-HHHHHH
Confidence 689996 899985 455444
No 208
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=22.22 E-value=33 Score=33.74 Aligned_cols=19 Identities=47% Similarity=0.793 Sum_probs=13.6
Q ss_pred eeecCC--CCchHHHHHhhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALRA 122 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalra 122 (213)
|+|||+ .|.||| |||+.|.
T Consensus 10 IltsGGdaPGmNaa-Iravvr~ 30 (787)
T 3o8o_A 10 VMTSGGDSPGMNAA-VRAVVRT 30 (787)
T ss_dssp EEEESSCCTTHHHH-HHHHHHH
T ss_pred EEeeCCCchhHHHH-HHHHHHH
Confidence 689996 899974 5655553
No 209
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=22.22 E-value=33 Score=33.54 Aligned_cols=18 Identities=33% Similarity=0.458 Sum_probs=13.7
Q ss_pred eeecCC--CCchHHHHHhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALR 121 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalr 121 (213)
|+|||+ .|.||| |||+.|
T Consensus 398 IltsGGdapGmNaa-Iravv~ 417 (766)
T 3o8o_B 398 IVNVGAPAGGINSA-VYSMAT 417 (766)
T ss_dssp EEEESSCCTTHHHH-HHHHHH
T ss_pred EEecCCCcHHHHHH-HHHHHH
Confidence 689998 899974 566655
No 210
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=22.20 E-value=37 Score=31.58 Aligned_cols=19 Identities=37% Similarity=0.480 Sum_probs=13.3
Q ss_pred eeecCC--CCchHHHHHhhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALRA 122 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalra 122 (213)
|+|||+ .|.||| |||+.|.
T Consensus 102 IltsGGdaPGmNaa-Iravv~~ 122 (487)
T 2hig_A 102 IVTCGGICPGLNDV-IRSITLT 122 (487)
T ss_dssp EEECSSCCTTHHHH-HHHHHHH
T ss_pred EEecCCCcchhhHH-HHHHHHH
Confidence 679998 699974 4555544
No 211
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=22.13 E-value=65 Score=25.44 Aligned_cols=32 Identities=25% Similarity=0.100 Sum_probs=22.9
Q ss_pred cchhHHHHHHHHHHHHHH-hcCceeecCCCCch
Q 028143 81 MGFMHQELIEILSYALVI-TKNHIYTSGASGTN 112 (213)
Q Consensus 81 v~~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 112 (213)
+|=--..|.+.+..|+.. .-.-|+|||++|..
T Consensus 59 v~Dd~~~I~~al~~a~~~~~~DlVIttGGtg~g 91 (189)
T 1jlj_A 59 VPDEIEEIKETLIDWCDEKELNLILTTGGTGFA 91 (189)
T ss_dssp ECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred eCCCHHHHHHHHHHHhhcCCCCEEEEcCCCCCC
Confidence 333346777777777653 45789999999976
No 212
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=22.11 E-value=28 Score=28.31 Aligned_cols=38 Identities=16% Similarity=0.090 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHH-------HHhcCceeecCCCCchHHHHHhhhhh
Q 028143 85 HQELIEILSYAL-------VITKNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 85 hq~LIEllsyAl-------vl~gn~i~TSGA~GtNaAvIRGalra 122 (213)
+..+-|-++.-+ +-..+-++|||++..+.+++++.++.
T Consensus 85 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~ 129 (444)
T 3if2_A 85 DSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGA 129 (444)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEE
T ss_pred CHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCC
Confidence 455666555544 24568899999999999999988764
No 213
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=22.03 E-value=57 Score=29.71 Aligned_cols=37 Identities=16% Similarity=0.265 Sum_probs=29.0
Q ss_pred hcCceeecCCCCchHHHH---HhhhhhcCCCceeEeecccc
Q 028143 99 TKNHIYTSGASGTNAAVI---RGALRAERPDLLTVILPQSL 136 (213)
Q Consensus 99 ~gn~i~TSGA~GtNaAvI---RGalrae~p~lLTViLPQSL 136 (213)
-||-++-.|+.|...|++ ++|||+ -..++||..|++.
T Consensus 244 ~G~vlvigGs~~~~GA~~Laa~aAlr~-GaGlv~~~~~~~~ 283 (502)
T 3rss_A 244 YGKVLIIAGSRLYSGAPVLSGMGSLKV-GTGLVKLAVPFPQ 283 (502)
T ss_dssp GCEEEEECCCSSCCSHHHHHHHHHHHT-TCSEEEEEEETTT
T ss_pred CceEEEEECCCCCCCHHHHHHHHHHHh-CcCeEEEEEcHHH
Confidence 577788888866655554 899999 9999999988863
No 214
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=22.01 E-value=60 Score=25.95 Aligned_cols=32 Identities=13% Similarity=0.110 Sum_probs=22.4
Q ss_pred cchhHHHHHHHHHHHHHH-hcCceeecCCCCch
Q 028143 81 MGFMHQELIEILSYALVI-TKNHIYTSGASGTN 112 (213)
Q Consensus 81 v~~~hq~LIEllsyAlvl-~gn~i~TSGA~GtN 112 (213)
+|==...|.+.+..++.. .-.-|+|||++|..
T Consensus 47 V~Dd~~~I~~al~~a~~~~~~DlVitTGGtg~g 79 (195)
T 1di6_A 47 IPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPA 79 (195)
T ss_dssp EESCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred eCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 333346677777777653 35789999999975
No 215
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=21.96 E-value=35 Score=27.51 Aligned_cols=21 Identities=29% Similarity=0.366 Sum_probs=15.1
Q ss_pred CceeecCCCCchHHHHHhhhh
Q 028143 101 NHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 101 n~i~TSGA~GtNaAvIRGalr 121 (213)
+-++|+|++..+.++++..++
T Consensus 88 ~v~~t~g~~~al~~~~~~~~~ 108 (411)
T 2o0r_A 88 EVLVTVGATEAIAAAVLGLVE 108 (411)
T ss_dssp SEEEEEHHHHHHHHHHHHHCC
T ss_pred eEEEeCCHHHHHHHHHHHhcC
Confidence 667788877777777777643
No 216
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=21.84 E-value=70 Score=25.24 Aligned_cols=16 Identities=19% Similarity=0.140 Sum_probs=10.4
Q ss_pred ecCCCCchHHHHHhhh
Q 028143 105 TSGASGTNAAVIRGAL 120 (213)
Q Consensus 105 TSGA~GtNaAvIRGal 120 (213)
|+|+++.+.++++.+.
T Consensus 100 ~~g~~~a~~~~~~~~~ 115 (396)
T 2q7w_A 100 TPGGTGALRVAADFLA 115 (396)
T ss_dssp ESHHHHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHH
Confidence 7777766666666553
No 217
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=21.82 E-value=41 Score=26.82 Aligned_cols=43 Identities=16% Similarity=0.115 Sum_probs=22.1
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhc-Cceeec
Q 028143 58 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK-NHIYTS 106 (213)
Q Consensus 58 ~lqELaaIQq~g~rria~lGsRhv~~~hq~LIEllsyAlvl~g-n~i~TS 106 (213)
+-+.++..-.-.+..|.+..+ -.+.++++..++...| .+|++.
T Consensus 63 lr~~la~~~~~~~~~v~~~~G------~~~ai~~~~~~~~~~g~d~Vl~~ 106 (356)
T 1fg7_A 63 VIENYAQYAGVKPEQVLVSRG------ADEGIELLIRAFCEPGKDAILYC 106 (356)
T ss_dssp HHHHHHHHHTSCGGGEEEESH------HHHHHHHHHHHHCCTTTCEEEEC
T ss_pred HHHHHHHHhCCChHHEEEcCC------HHHHHHHHHHHHhCCCCCEEEEe
Confidence 445555554333344433221 3566666666665556 555554
No 218
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=21.80 E-value=2.3e+02 Score=24.18 Aligned_cols=69 Identities=22% Similarity=0.269 Sum_probs=41.9
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHHhcCceeecCCCC---------------chHHHHHhhhhhcCCCceeEeecc
Q 028143 70 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGASG---------------TNAAVIRGALRAERPDLLTVILPQ 134 (213)
Q Consensus 70 ~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA~G---------------tNaAvIRGalrae~p~lLTViLPQ 134 (213)
.++|||+|.-+||- -|+.+|...|+.++-..-+- .+..+++.| ++++|++-+-+|
T Consensus 8 ~~kIgIIG~G~mG~-------slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a--~~~aDlVilavP- 77 (341)
T 3ktd_A 8 SRPVCILGLGLIGG-------SLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRA--AAEDALIVLAVP- 77 (341)
T ss_dssp SSCEEEECCSHHHH-------HHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHH--HHTTCEEEECSC-
T ss_pred CCEEEEEeecHHHH-------HHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhc--ccCCCEEEEeCC-
Confidence 46899999888774 35666777788776544321 112233333 235688877778
Q ss_pred cccCCChhHHHHHHHhhhH
Q 028143 135 SLKKQPPESQELLAKVKTV 153 (213)
Q Consensus 135 SL~kQp~EsrelLe~V~~l 153 (213)
|...++.++++..+
T Consensus 78 -----~~~~~~vl~~l~~~ 91 (341)
T 3ktd_A 78 -----MTAIDSLLDAVHTH 91 (341)
T ss_dssp -----HHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHcc
Confidence 33566677766654
No 219
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=21.73 E-value=58 Score=25.44 Aligned_cols=51 Identities=20% Similarity=0.350 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHh-cCceeecCCCCchH
Q 028143 58 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVIT-KNHIYTSGASGTNA 113 (213)
Q Consensus 58 ~lqELaaIQq~g~rria~lGsRhv~~~hq~LIEllsyAlvl~-gn~i~TSGA~GtNa 113 (213)
++.++ +++.|-.-+. ...+|=--..|.+.+..|+... -.-|+|||++|...
T Consensus 44 ~L~~~--l~~~G~~v~~---~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 44 IIKQL--LIENGHKIIG---YSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp HHHHH--HHHTTCEEEE---EEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred HHHHH--HHHCCCEEEE---EEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 45443 4555654221 1233333567778888776542 47899999999764
No 220
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=21.62 E-value=94 Score=25.41 Aligned_cols=35 Identities=17% Similarity=0.131 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhh
Q 028143 87 ELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 87 ~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalra 122 (213)
.|-|.++.-+- ..+-++|+|++..|.++++++.+.
T Consensus 78 ~l~~~la~~~~-~~~v~~t~~gt~A~~~al~~~~~~ 112 (467)
T 2oqx_A 78 ALAESVKNIFG-YQYTIPTHQGRGAEQIYIPVLIKK 112 (467)
T ss_dssp HHHHHHHHHHC-CSEEEEEC--CCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-cCcEEEcCCcHHHHHHHHHHHhcc
Confidence 34444443331 245677777777777777777654
No 221
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=21.56 E-value=43 Score=29.12 Aligned_cols=39 Identities=18% Similarity=0.166 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHHHHh---cCceeecCCCCchHHHHHhhhhh
Q 028143 84 MHQELIEILSYALVIT---KNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 84 ~hq~LIEllsyAlvl~---gn~i~TSGA~GtNaAvIRGalra 122 (213)
+.+++++.++.-+-.. ++-++|||||..|..++..+...
T Consensus 136 le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~ 177 (511)
T 3vp6_A 136 MEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYK 177 (511)
T ss_dssp HHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHH
Confidence 3455555555544443 46689999999999888877653
No 222
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=21.54 E-value=1.7e+02 Score=23.71 Aligned_cols=39 Identities=13% Similarity=0.140 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhh
Q 028143 84 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 84 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalra 122 (213)
.+..|.|.++..+--..+-++|+|++-.|.++||.+...
T Consensus 96 ~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~ 134 (434)
T 3l44_A 96 LEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAY 134 (434)
T ss_dssp HHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHh
Confidence 344555555443322357789999999999999977653
No 223
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=21.54 E-value=54 Score=27.03 Aligned_cols=99 Identities=12% Similarity=0.095 Sum_probs=49.8
Q ss_pred HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhcCceeecC-CCCchHHHHHhhhhhcCCCceeEeecccc
Q 028143 58 YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSG-ASGTNAAVIRGALRAERPDLLTVILPQSL 136 (213)
Q Consensus 58 ~lqELaaIQq~g~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSG-A~GtNaAvIRGalrae~p~lLTViLPQSL 136 (213)
+.+.|+.+- |.+.+-+++|- ..-+++.-.++...|.+|+++- .-+.+...++..++....+ .+.+|-.
T Consensus 71 l~~~la~~~--g~~~~~~~~sG------t~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~--~~~v~~~- 139 (392)
T 3qhx_A 71 LEAALAAVE--DAAFGRAFSSG------MAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVE--YTPVALA- 139 (392)
T ss_dssp HHHHHHHHT--TCSEEEEESSH------HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCE--EEEECTT-
T ss_pred HHHHHHHHh--CCCcEEEECCH------HHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcE--EEEeCCC-
Confidence 445555553 34455565552 2456666666666777777654 3333333333333332222 2223321
Q ss_pred cCCChhHHHHHHHhhh------HhcCCCCC---CCChHHHHhhhhH
Q 028143 137 KKQPPESQELLAKVKT------VIEKPHND---HLPLIEASRLCNM 173 (213)
Q Consensus 137 ~kQp~EsrelLe~V~~------lvE~penD---~LpL~eAS~lCN~ 173 (213)
.-+.|++.+. ++|.|.|- -.|+.+-..+|..
T Consensus 140 ------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~ 179 (392)
T 3qhx_A 140 ------DLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGAD 179 (392)
T ss_dssp ------CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred ------CHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHH
Confidence 2233333221 46777764 4577777888865
No 224
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=21.48 E-value=1.9e+02 Score=23.56 Aligned_cols=62 Identities=18% Similarity=0.103 Sum_probs=34.2
Q ss_pred hhHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhhcCCCceeEeecccccCCChhHHHHHHH
Q 028143 83 FMHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRAERPDLLTVILPQSLKKQPPESQELLAK 149 (213)
Q Consensus 83 ~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalrae~p~lLTViLPQSL~kQp~EsrelLe~ 149 (213)
|=-.-+.-++.+|....+.+|+|+++ |-.+..+--+-+. .-=-.+|++|... |++-++++..
T Consensus 37 ~K~R~a~~~l~~a~~~g~~~vv~~ss-GN~g~alA~~a~~-~G~~~~i~~p~~~---~~~k~~~~~~ 98 (318)
T 2rkb_A 37 FKIRGIGHFCQEMAKKGCRHLVCSSG-GNAGIAAAYAARK-LGIPATIVLPEST---SLQVVQRLQG 98 (318)
T ss_dssp TTHHHHHHHHHHHHHTTCCEEEECCC-SHHHHHHHHHHHH-HTCCEEEEECTTC---CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEECC-chHHHHHHHHHHH-cCCCEEEEECCCC---cHHHHHHHHh
Confidence 33344445667777777788888766 4333322222222 2223788999874 4555554443
No 225
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=21.39 E-value=51 Score=26.15 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhh
Q 028143 84 MHQELIEILSYALVITKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 84 ~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalr 121 (213)
.+..+.|.++.-+- ..+-++|||++..|.++++.++.
T Consensus 82 ~~~~l~~~la~~~~-~~~v~~~~gg~~a~~~al~~~~~ 118 (406)
T 4adb_A 82 PVLRLAKKLIDATF-ADRVFFCNSGAEANEAALKLARK 118 (406)
T ss_dssp HHHHHHHHHHHHSS-CSEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCC-CCeEEEeCcHHHHHHHHHHHHHH
Confidence 35666666665442 23788999999999999997654
No 226
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=21.37 E-value=3.4e+02 Score=22.27 Aligned_cols=125 Identities=14% Similarity=0.113 Sum_probs=68.4
Q ss_pred eeeeccccCCCChh--HHHHHHH-HHhcCCceEEEeccc--ccchhHHHHHHHHHHHHHHhcCceeecCCCCchHHH--H
Q 028143 44 AVMVSEFKPVPDVD--YLQELLA-IQQQGPRAIGFFGTR--NMGFMHQELIEILSYALVITKNHIYTSGASGTNAAV--I 116 (213)
Q Consensus 44 ~v~~~~~~~~p~~D--~lqELaa-IQq~g~rria~lGsR--hv~~~hq~LIEllsyAlvl~gn~i~TSGA~GtNaAv--I 116 (213)
..+.++++.--++| -++.+.. +-+.|-.-|.++||- -..+.+.+-.+++..+.-..+.-|+-.|+..|.-++ .
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gViaGvg~~~t~~ai~la 84 (288)
T 2nuw_A 5 SPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLIFQVGSLNLNDVMELV 84 (288)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEEEECCCSCHHHHHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCeEEeeCCCCHHHHHHHH
Confidence 34456665433355 4555555 446899999999984 455667777777777765444444445555555543 3
Q ss_pred HhhhhhcCCCceeEeecccccCCC--hhHHHHHHHhhhHhcCC---------CCCCCChHHHHhh
Q 028143 117 RGALRAERPDLLTVILPQSLKKQP--PESQELLAKVKTVIEKP---------HNDHLPLIEASRL 170 (213)
Q Consensus 117 RGalrae~p~lLTViLPQSL~kQp--~EsrelLe~V~~lvE~p---------enD~LpL~eAS~l 170 (213)
|-|-++ ..+-+-|+-| +..|.| .+..+-.+.|..-+..| .+-.|+.....+|
T Consensus 85 ~~A~~~-Gadavlv~~P-~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 85 KFSNEM-DILGVSSHSP-YYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp HHHHTS-CCSEEEECCC-CSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred HHHHhc-CCCEEEEcCC-cCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc
Confidence 334444 5666666655 454422 22233334444433333 1234565555555
No 227
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=21.36 E-value=58 Score=26.00 Aligned_cols=26 Identities=19% Similarity=0.341 Sum_probs=19.6
Q ss_pred CCceEEEecccccchhHHHHHHHHHHHHHHhcC
Q 028143 69 GPRAIGFFGTRNMGFMHQELIEILSYALVITKN 101 (213)
Q Consensus 69 g~rria~lGsRhv~~~hq~LIEllsyAlvl~gn 101 (213)
.+.+|+|+|.-+|+.. +++.|+..|+
T Consensus 6 ~~mkI~IiGaG~vG~~-------~a~~l~~~g~ 31 (319)
T 1lld_A 6 KPTKLAVIGAGAVGST-------LAFAAAQRGI 31 (319)
T ss_dssp -CCEEEEECCSHHHHH-------HHHHHHHTTC
T ss_pred CCCEEEEECCCHHHHH-------HHHHHHhCCC
Confidence 4568999999888875 5677777777
No 228
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=21.32 E-value=37 Score=34.48 Aligned_cols=20 Identities=55% Similarity=0.725 Sum_probs=14.3
Q ss_pred ceeecCC--CCchHHHHHhhhhh
Q 028143 102 HIYTSGA--SGTNAAVIRGALRA 122 (213)
Q Consensus 102 ~i~TSGA--~GtNaAvIRGalra 122 (213)
=|+|||+ .|.||| |||+.|.
T Consensus 214 aIlTSGGdaPGmNAa-IRaVVr~ 235 (989)
T 3opy_A 214 AIITSGGDAPGMNAA-VRAVTRA 235 (989)
T ss_dssp EEEECSSCCTTHHHH-HHHHHHH
T ss_pred EEEeeCCCchhHHHH-HHHHHHH
Confidence 3799997 899984 5665553
No 229
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=21.31 E-value=74 Score=26.14 Aligned_cols=29 Identities=21% Similarity=0.352 Sum_probs=23.4
Q ss_pred CceEEEecccccchhHHHHHHHHHHHHHHhcCceee
Q 028143 70 PRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYT 105 (213)
Q Consensus 70 ~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~T 105 (213)
++||||+|.-+||.- |+.-|+..||.++-
T Consensus 5 s~kIgfIGLG~MG~~-------mA~~L~~~G~~V~v 33 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTP-------IAEILLEAGYELVV 33 (297)
T ss_dssp CCEEEEECCSTTHHH-------HHHHHHHTTCEEEE
T ss_pred CCcEEEEecHHHHHH-------HHHHHHHCCCeEEE
Confidence 468999999999963 67777888998763
No 230
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=21.27 E-value=36 Score=33.31 Aligned_cols=19 Identities=42% Similarity=0.730 Sum_probs=13.8
Q ss_pred eeecCC--CCchHHHHHhhhhh
Q 028143 103 IYTSGA--SGTNAAVIRGALRA 122 (213)
Q Consensus 103 i~TSGA--~GtNaAvIRGalra 122 (213)
|+|||+ .|.||| |||+.|.
T Consensus 405 IltsGGdapGmNaa-Iravv~~ 425 (762)
T 3o8l_A 405 VMNVGAPAAGMNAA-VRSTVRI 425 (762)
T ss_dssp EEEESSCCTTHHHH-HHHHHHH
T ss_pred EEecCCCcHHHHHH-HHHHHHH
Confidence 689996 899974 5665553
No 231
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=21.24 E-value=38 Score=27.41 Aligned_cols=21 Identities=19% Similarity=0.082 Sum_probs=14.5
Q ss_pred cCceeecCCCCchHHHHHhhh
Q 028143 100 KNHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 100 gn~i~TSGA~GtNaAvIRGal 120 (213)
.+-++|+|++..+.++++..+
T Consensus 103 ~~v~~~~g~t~a~~~~~~~~~ 123 (409)
T 2gb3_A 103 ENVLVTNGGSEAILFSFAVIA 123 (409)
T ss_dssp GGEEEESHHHHHHHHHHHHHC
T ss_pred HHEEEeCCHHHHHHHHHHHhC
Confidence 456777777777777777664
No 232
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=21.18 E-value=47 Score=26.64 Aligned_cols=22 Identities=23% Similarity=0.175 Sum_probs=13.6
Q ss_pred hcCceeecCCCCchHHHHHhhh
Q 028143 99 TKNHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 99 ~gn~i~TSGA~GtNaAvIRGal 120 (213)
..+-++|+|++..+.++++..+
T Consensus 104 ~~~v~~~~g~~~al~~~~~~l~ 125 (416)
T 1bw0_A 104 KDNVVLCSGGSHGILMAITAIC 125 (416)
T ss_dssp GGGEEEESHHHHHHHHHHHHHC
T ss_pred cceEEEeCChHHHHHHHHHHhC
Confidence 3455667776666666666654
No 233
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=21.09 E-value=1.6e+02 Score=25.04 Aligned_cols=38 Identities=13% Similarity=0.067 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHHH-HhcCceeecCCCCchHHHHHhhhh
Q 028143 84 MHQELIEILSYALV-ITKNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 84 ~hq~LIEllsyAlv-l~gn~i~TSGA~GtNaAvIRGalr 121 (213)
.+..|-|.++.-+- -..+-++|+|++-.|-++||.+..
T Consensus 119 ~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~ 157 (457)
T 3tfu_A 119 PAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQ 157 (457)
T ss_dssp HHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHH
Confidence 34555555554331 124678999999999999998875
No 234
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=21.04 E-value=36 Score=32.40 Aligned_cols=38 Identities=21% Similarity=0.192 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHhcCceeecCCCCchHHHHHhhhhh
Q 028143 85 HQELIEILSYALVITKNHIYTSGASGTNAAVIRGALRA 122 (213)
Q Consensus 85 hq~LIEllsyAlvl~gn~i~TSGA~GtNaAvIRGalra 122 (213)
+.++-|.++...--..-.++|||+++.|.++|.+.+..
T Consensus 197 i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~p 234 (715)
T 3n75_A 197 HKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPA 234 (715)
T ss_dssp HHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCC
Confidence 44555555554443333345666666666666665543
No 235
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=20.98 E-value=39 Score=27.14 Aligned_cols=21 Identities=19% Similarity=0.167 Sum_probs=12.9
Q ss_pred cCceeecCCCCchHHHHHhhh
Q 028143 100 KNHIYTSGASGTNAAVIRGAL 120 (213)
Q Consensus 100 gn~i~TSGA~GtNaAvIRGal 120 (213)
.+-++|+|++..+.++++..+
T Consensus 102 ~~v~~~~g~t~al~~~~~~l~ 122 (389)
T 1o4s_A 102 DQVVVTNGAKQALFNAFMALL 122 (389)
T ss_dssp GGEEEESHHHHHHHHHHHHHC
T ss_pred HHEEEecCHHHHHHHHHHHhC
Confidence 355666666666666666653
No 236
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=20.95 E-value=57 Score=26.55 Aligned_cols=22 Identities=5% Similarity=0.185 Sum_probs=18.0
Q ss_pred cCceeecCCCCchHHHHHhhhh
Q 028143 100 KNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 100 gn~i~TSGA~GtNaAvIRGalr 121 (213)
.+-++|||++..+.++|+.+.+
T Consensus 120 ~~v~~~~g~~ea~~~a~~~~~~ 141 (421)
T 3l8a_A 120 EDILFIDGVVPAISIALQAFSE 141 (421)
T ss_dssp GGEEEESCHHHHHHHHHHHHSC
T ss_pred HHEEEcCCHHHHHHHHHHHhcC
Confidence 4578999999888889988754
No 237
>3r0p_A L-PSP putative endoribonuclease; hydrolase; 1.90A {Uncultured organism} SCOP: d.79.1.0
Probab=20.95 E-value=19 Score=26.34 Aligned_cols=16 Identities=25% Similarity=0.380 Sum_probs=12.9
Q ss_pred HhcCceeecCCCCchH
Q 028143 98 ITKNHIYTSGASGTNA 113 (213)
Q Consensus 98 l~gn~i~TSGA~GtNa 113 (213)
..||.||+||-.|.+.
T Consensus 24 ~~g~~l~vSGq~~~~~ 39 (127)
T 3r0p_A 24 KVNNTVYLSGQIPLDP 39 (127)
T ss_dssp EETTEEEEEEECSBCT
T ss_pred EECCEEEEeccCCcCC
Confidence 3599999999888753
No 238
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=20.95 E-value=31 Score=27.79 Aligned_cols=37 Identities=16% Similarity=0.098 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHh--cCcee-ecCCCCchHHHHHhhhh
Q 028143 85 HQELIEILSYALVIT--KNHIY-TSGASGTNAAVIRGALR 121 (213)
Q Consensus 85 hq~LIEllsyAlvl~--gn~i~-TSGA~GtNaAvIRGalr 121 (213)
...+.|.++.-+-.. .+-++ |+||+..+.+++++.++
T Consensus 80 ~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~ 119 (398)
T 2fyf_A 80 VGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLID 119 (398)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcC
Confidence 456667666665444 24567 99999999999999863
No 239
>1sn9_A BBAT, tetrameric beta-BETA-alpha mini-protein; protein design, domain swapping, oligomerization, de novo protein; HET: DBZ; 1.20A {Synthetic} SCOP: k.14.1.1 PDB: 1sna_A* 1sne_A* 1xof_B* 1xof_A*
Probab=20.92 E-value=55 Score=19.97 Aligned_cols=16 Identities=25% Similarity=0.571 Sum_probs=13.1
Q ss_pred CCCChhHHHHHHHHHh
Q 028143 52 PVPDVDYLQELLAIQQ 67 (213)
Q Consensus 52 ~~p~~D~lqELaaIQq 67 (213)
.+|+.|++.||+.+-.
T Consensus 3 ripsydfadelakllr 18 (26)
T 1sn9_A 3 RIPSYDFADELAKLLR 18 (26)
T ss_dssp CBTTBCHHHHHHHHHH
T ss_pred CCCccchHHHHHHHHH
Confidence 4788999999998744
No 240
>3l7q_A Putative translation initiation inhibitor, ALDR R like protein; translation initiation inhibitor regulator-like; 2.50A {Streptococcus mutans} SCOP: d.79.1.0
Probab=20.92 E-value=20 Score=26.30 Aligned_cols=16 Identities=25% Similarity=0.360 Sum_probs=13.1
Q ss_pred HHhcCceeecCCCCch
Q 028143 97 VITKNHIYTSGASGTN 112 (213)
Q Consensus 97 vl~gn~i~TSGA~GtN 112 (213)
+..||.||+||-.|.+
T Consensus 20 v~~g~~l~vSGq~~~d 35 (125)
T 3l7q_A 20 KIVGNLLFASGQVPLS 35 (125)
T ss_dssp EEETTEEEEEEECSBC
T ss_pred EEECCEEEEeccCCcC
Confidence 3468999999988875
No 241
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=20.76 E-value=50 Score=28.22 Aligned_cols=41 Identities=12% Similarity=0.132 Sum_probs=28.0
Q ss_pred cchhHHHHHHHHHHHHHHh-----------cCceeecCCCCchHHHHHhhhh
Q 028143 81 MGFMHQELIEILSYALVIT-----------KNHIYTSGASGTNAAVIRGALR 121 (213)
Q Consensus 81 v~~~hq~LIEllsyAlvl~-----------gn~i~TSGA~GtNaAvIRGalr 121 (213)
+.-+-+.+++.++.-+-+. |.-++|||||..|..++..|..
T Consensus 116 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~ 167 (481)
T 4e1o_A 116 CTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARK 167 (481)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHH
Confidence 3345566666666665543 2449999999999888877653
No 242
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=20.58 E-value=78 Score=28.05 Aligned_cols=77 Identities=14% Similarity=0.153 Sum_probs=50.3
Q ss_pred hHHHHHHHH--------HhcCCceEEEecccccchhHHHHHHHHHHHHHHhc---------------------CceeecC
Q 028143 57 DYLQELLAI--------QQQGPRAIGFFGTRNMGFMHQELIEILSYALVITK---------------------NHIYTSG 107 (213)
Q Consensus 57 D~lqELaaI--------Qq~g~rria~lGsRhv~~~hq~LIEllsyAlvl~g---------------------n~i~TSG 107 (213)
-+++++..| +.-+.+.+-+||||..- -.+=.+..||....| ||++...
T Consensus 113 nil~~~SgIAT~a~r~v~aa~~~~~~~fgtRrt~---p~~~~~~~~A~~iGG~~~tsn~l~~~~~~~~~~GT~~H~~i~~ 189 (395)
T 2i14_A 113 GMLSQASGIATAALRIKIAAKFKPVYSFGIRHMH---PAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIIT 189 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCEEECGGGGSC---GGGHHHHHHHHHHTTCSEESBHHHHHHHTCCCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEEcCCCCC---HHHHHHHHHHHhcCCceecchHHHHHhcCCCCCCchhhHHHHh
Confidence 356666554 23345679999999864 234455789998888 7875322
Q ss_pred CCCchHHHHHhhhhhcCCC-ceeEeecccccC
Q 028143 108 ASGTNAAVIRGALRAERPD-LLTVILPQSLKK 138 (213)
Q Consensus 108 A~GtNaAvIRGalrae~p~-lLTViLPQSL~k 138 (213)
. |.-.++++-+.+. -|+ ...++|-.+++.
T Consensus 190 ~-g~~~~A~~~~~~~-~p~~~~~~vlvDT~d~ 219 (395)
T 2i14_A 190 V-GDQVKAWKYFDEV-IEEEVPRIALVDTFYD 219 (395)
T ss_dssp H-TCHHHHHHHHHHH-SCSSSCCEEECCSSBC
T ss_pred c-CCHHHHHHHHHHh-CCCCccEEEEeccchH
Confidence 2 2345566666666 555 668999999875
No 243
>1utr_A Uteroglobin; clara cell 17 kDa protein (CC10), phospholipase A2 inhibitor, clara cell phospholipid-binding protein, progesterone binding; HET: PCB; NMR {Rattus norvegicus} SCOP: a.101.1.1
Probab=20.55 E-value=34 Score=24.93 Aligned_cols=31 Identities=26% Similarity=0.439 Sum_probs=18.2
Q ss_pred ccccCCChhHHHHHHHhhhHhcCCCCCCCChHHHHhhhhHHH
Q 028143 134 QSLKKQPPESQELLAKVKTVIEKPHNDHLPLIEASRLCNMDI 175 (213)
Q Consensus 134 QSL~kQp~EsrelLe~V~~lvE~penD~LpL~eAS~lCN~eI 175 (213)
|=.+++++|.|..+.+++.-|- +|.+|+++.
T Consensus 64 ~Cvd~ls~e~r~~i~~ll~~I~-----------~S~~C~~~~ 94 (96)
T 1utr_A 64 RLVDTLPQETRINIVKLTEKIL-----------TSPLCEQDL 94 (96)
T ss_dssp HHHTTSCSHHHHHHHHHHHHHT-----------SCCCC----
T ss_pred HHHHhCCHHHHHHHHHHHHHHH-----------cCccccccC
Confidence 4456777777777777766553 567788764
No 244
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=20.25 E-value=62 Score=25.04 Aligned_cols=51 Identities=10% Similarity=0.040 Sum_probs=27.1
Q ss_pred ccCCCChh-HHHHHHHHHhcCCceEEEecccccchhHHHHHHHHHHHHHHhcCceeecCC
Q 028143 50 FKPVPDVD-YLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTSGA 108 (213)
Q Consensus 50 ~~~~p~~D-~lqELaaIQq~g~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TSGA 108 (213)
|.+-|... +-+.|++.- |.+.+.++++- + +-+++...++...|.+++++.-
T Consensus 34 y~~~~~~~~l~~~la~~~--g~~~~~~~~~g----t--~a~~~~~~~~~~~gd~Vl~~~~ 85 (347)
T 1jg8_A 34 YGEDPTINELERLAAETF--GKEAALFVPSG----T--MGNQVSIMAHTQRGDEVILEAD 85 (347)
T ss_dssp GTCCHHHHHHHHHHHHHH--TCSEEEEESCH----H--HHHHHHHHHHCCTTCEEEEETT
T ss_pred cCCChHHHHHHHHHHHHh--CCceEEEecCc----H--HHHHHHHHHhcCCCCEEEEcCc
Confidence 44433343 445555543 44566566542 1 1234555666667888887644
No 245
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=20.17 E-value=86 Score=28.70 Aligned_cols=31 Identities=19% Similarity=0.353 Sum_probs=27.0
Q ss_pred ccccCCCC-----hh-HHHHHHHHHhcCCceEEEecc
Q 028143 48 SEFKPVPD-----VD-YLQELLAIQQQGPRAIGFFGT 78 (213)
Q Consensus 48 ~~~~~~p~-----~D-~lqELaaIQq~g~rria~lGs 78 (213)
.++.++|. +| ++.|+..+.+.|-+.|.+||-
T Consensus 59 ~~I~SMPGv~r~sid~l~~~~~~~~~lGi~av~LFgv 95 (356)
T 3obk_A 59 VPIPSMPGQSRLSMEDLLKEVGEARSYGIKAFMLFPK 95 (356)
T ss_dssp EECTTSTTCEEECHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cccCCCCCceEECHHHHHHHHHHHHHCCCCEEEEecC
Confidence 57777786 57 889999999999999999996
No 246
>1qu9_A YJGF protein; structural genomics; HET: CSP; 1.20A {Escherichia coli} SCOP: d.79.1.1 PDB: 1j7h_A 2uyk_A 2uyj_A 2uyn_A* 2uyp_A
Probab=20.10 E-value=30 Score=25.29 Aligned_cols=15 Identities=40% Similarity=0.248 Sum_probs=12.3
Q ss_pred HhcCceeecCCCCch
Q 028143 98 ITKNHIYTSGASGTN 112 (213)
Q Consensus 98 l~gn~i~TSGA~GtN 112 (213)
..||.+|+||-.|.+
T Consensus 22 ~~g~~l~vSGq~~~d 36 (128)
T 1qu9_A 22 DLGNMIITSGQIPVN 36 (128)
T ss_dssp ECSSEEEECCBCSCC
T ss_pred EECCEEEEeccCCcc
Confidence 358999999988764
No 247
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=20.03 E-value=94 Score=25.35 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=22.9
Q ss_pred hcCCceEEEecccccchhHHHHHHHHHHHHHHhcCceeec
Q 028143 67 QQGPRAIGFFGTRNMGFMHQELIEILSYALVITKNHIYTS 106 (213)
Q Consensus 67 q~g~rria~lGsRhv~~~hq~LIEllsyAlvl~gn~i~TS 106 (213)
....++|||+|.-+|+- -|+..|+..|+.++-.
T Consensus 28 ~~~~~~I~iIG~G~mG~-------~~a~~l~~~G~~V~~~ 60 (320)
T 4dll_A 28 DPYARKITFLGTGSMGL-------PMARRLCEAGYALQVW 60 (320)
T ss_dssp -CCCSEEEEECCTTTHH-------HHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECccHHHH-------HHHHHHHhCCCeEEEE
Confidence 33456999999999984 3555666678876543
No 248
>2cwj_A Putative endonuclease; hydrolase, endoribonucrease, structural GE NPPSFA, national project on protein structural and function analyses; 3.60A {Aeropyrum pernix} SCOP: d.79.1.1
Probab=20.02 E-value=17 Score=26.45 Aligned_cols=16 Identities=19% Similarity=0.254 Sum_probs=12.9
Q ss_pred HhcCceeecCCCCchH
Q 028143 98 ITKNHIYTSGASGTNA 113 (213)
Q Consensus 98 l~gn~i~TSGA~GtNa 113 (213)
..||.+|+||-.|.+.
T Consensus 16 ~~g~~l~vSGq~~~~~ 31 (123)
T 2cwj_A 16 ESGCFMFVSGQIPINP 31 (123)
T ss_dssp EETTEEEEEEECCEEG
T ss_pred EECCEEEEeccCCCCC
Confidence 4589999999888754
Done!