Query 028146
Match_columns 213
No_of_seqs 168 out of 1068
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 11:05:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028146.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028146hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1j9j_A Stationary phase surviV 100.0 8.9E-68 3E-72 460.8 19.3 181 15-208 1-182 (247)
2 2phj_A 5'-nucleotidase SURE; S 100.0 4.3E-67 1.5E-71 457.2 19.9 180 15-207 2-183 (251)
3 3ty2_A 5'-nucleotidase SURE; s 100.0 1.6E-67 5.5E-72 461.7 16.9 183 11-207 8-191 (261)
4 2wqk_A 5'-nucleotidase SURE; S 100.0 8.4E-67 2.9E-71 455.5 19.7 182 14-207 1-183 (251)
5 2v4n_A Multifunctional protein 100.0 9.6E-67 3.3E-71 455.9 17.7 178 14-207 1-180 (254)
6 2e6c_A 5'-nucleotidase SURE; S 100.0 2.2E-66 7.6E-71 451.3 18.2 177 15-208 1-181 (244)
7 1l5x_A SurviVal protein E; str 100.0 3.8E-66 1.3E-70 457.6 15.9 184 15-207 1-190 (280)
8 3oti_A CALG3; calicheamicin, T 95.6 0.0074 2.5E-07 52.8 3.6 44 6-50 12-56 (398)
9 3rsc_A CALG2; TDP, enediyne, s 94.9 0.091 3.1E-06 45.8 8.4 45 4-52 10-58 (415)
10 3otg_A CALG1; calicheamicin, T 94.7 0.16 5.4E-06 44.0 9.4 45 6-51 12-57 (412)
11 4fzr_A SSFS6; structural genom 94.2 0.025 8.6E-07 49.3 3.0 41 10-51 11-52 (398)
12 3ia7_A CALG4; glycosysltransfe 93.7 0.16 5.6E-06 43.5 7.3 37 14-51 4-41 (402)
13 2iya_A OLEI, oleandomycin glyc 93.1 0.42 1.4E-05 41.9 9.2 38 13-54 11-52 (424)
14 3tsa_A SPNG, NDP-rhamnosyltran 93.0 0.13 4.3E-06 44.5 5.5 37 14-51 1-38 (391)
15 2iyf_A OLED, oleandomycin glyc 92.6 0.52 1.8E-05 41.2 8.9 37 13-53 6-46 (430)
16 3fro_A GLGA glycogen synthase; 89.2 0.66 2.3E-05 39.8 6.2 41 13-54 1-47 (439)
17 4amg_A Snogd; transferase, pol 84.4 0.99 3.4E-05 38.7 4.5 37 13-53 21-61 (400)
18 2iuy_A Avigt4, glycosyltransfe 82.6 0.85 2.9E-05 38.3 3.3 41 13-54 2-59 (342)
19 2r60_A Glycosyl transferase, g 81.5 2 6.7E-05 38.3 5.5 41 12-53 5-61 (499)
20 2yjn_A ERYCIII, glycosyltransf 81.1 1.3 4.4E-05 39.1 4.1 43 6-52 12-58 (441)
21 2gek_A Phosphatidylinositol ma 79.7 2.6 9E-05 35.7 5.5 45 9-54 15-64 (406)
22 3c48_A Predicted glycosyltrans 76.4 2.9 0.0001 36.0 4.8 42 11-53 17-70 (438)
23 3n7t_A Macrophage binding prot 72.6 3.4 0.00012 34.8 4.2 41 13-54 10-60 (247)
24 3kkl_A Probable chaperone prot 71.6 2.5 8.4E-05 35.6 3.0 40 14-54 5-54 (244)
25 1rzu_A Glycogen synthase 1; gl 69.7 2.6 8.9E-05 37.2 2.9 37 15-52 1-44 (485)
26 2iw1_A Lipopolysaccharide core 69.4 3.6 0.00012 34.4 3.6 37 15-52 1-41 (374)
27 3s2u_A UDP-N-acetylglucosamine 69.3 8.3 0.00028 33.4 6.1 32 14-49 2-37 (365)
28 2qzs_A Glycogen synthase; glyc 68.1 3 0.0001 36.8 2.9 37 15-52 1-44 (485)
29 4e08_A DJ-1 beta; flavodoxin-l 66.0 8.6 0.00029 30.2 5.0 33 17-52 10-42 (190)
30 1f0k_A MURG, UDP-N-acetylgluco 65.9 5.8 0.0002 33.2 4.2 34 15-52 7-44 (364)
31 2x6q_A Trehalose-synthase TRET 64.8 11 0.00037 32.3 5.8 39 12-52 38-80 (416)
32 1wd5_A Hypothetical protein TT 62.9 10 0.00034 30.6 5.0 41 12-53 118-159 (208)
33 3to5_A CHEY homolog; alpha(5)b 62.2 7 0.00024 29.6 3.7 39 101-145 56-96 (134)
34 1rrv_A Glycosyltransferase GTF 61.1 5.6 0.00019 34.6 3.3 34 15-52 1-38 (416)
35 1iir_A Glycosyltransferase GTF 61.0 8.1 0.00028 33.6 4.4 35 15-53 1-39 (415)
36 4b4o_A Epimerase family protei 60.8 9.5 0.00032 31.4 4.6 31 15-49 1-31 (298)
37 3h4t_A Glycosyltransferase GTF 59.5 3.3 0.00011 36.2 1.5 37 15-52 1-38 (404)
38 1u9c_A APC35852; structural ge 57.2 22 0.00075 28.4 6.1 40 14-54 7-54 (224)
39 2p6p_A Glycosyl transferase; X 55.9 12 0.00041 31.7 4.5 34 15-52 1-38 (384)
40 1oi4_A Hypothetical protein YH 55.4 26 0.00089 27.5 6.1 40 14-54 23-62 (193)
41 3l18_A Intracellular protease 51.7 14 0.00047 28.2 3.8 38 14-52 2-39 (168)
42 3grc_A Sensor protein, kinase; 51.6 11 0.00037 26.8 3.0 30 9-41 1-30 (140)
43 2x0d_A WSAF; GT4 family, trans 50.4 10 0.00034 33.6 3.2 41 11-52 43-89 (413)
44 2hy7_A Glucuronosyltransferase 49.3 15 0.0005 32.2 4.0 44 3-48 3-49 (406)
45 3gpi_A NAD-dependent epimerase 48.9 25 0.00085 28.6 5.2 33 13-52 2-36 (286)
46 3okp_A GDP-mannose-dependent a 48.4 4.2 0.00014 34.1 0.3 39 12-53 2-45 (394)
47 2iuf_A Catalase; oxidoreductas 47.4 8 0.00027 37.7 2.1 35 17-52 534-568 (688)
48 4g41_A MTA/SAH nucleosidase; m 47.2 92 0.0031 24.9 8.4 47 126-172 181-232 (236)
49 3cwc_A Putative glycerate kina 46.6 53 0.0018 29.7 7.3 43 102-146 287-329 (383)
50 2lpm_A Two-component response 46.2 15 0.00051 27.4 3.1 84 11-145 5-88 (123)
51 3ono_A Ribose/galactose isomer 45.8 15 0.0005 30.8 3.3 35 14-49 3-40 (214)
52 3ot1_A 4-methyl-5(B-hydroxyeth 45.7 25 0.00087 28.0 4.7 38 14-52 9-46 (208)
53 2rk3_A Protein DJ-1; parkinson 45.6 33 0.0011 26.9 5.2 37 16-53 5-41 (197)
54 3o4v_A MTA/SAH nucleosidase; m 43.0 56 0.0019 26.2 6.4 50 125-174 177-231 (234)
55 2vrn_A Protease I, DR1199; cys 42.3 32 0.0011 26.6 4.6 40 13-53 8-47 (190)
56 3kto_A Response regulator rece 41.5 21 0.00072 25.2 3.2 30 9-41 1-30 (136)
57 3u27_C Microcompartments prote 41.5 9.6 0.00033 32.1 1.5 54 81-136 152-206 (220)
58 1rw7_A YDR533CP; alpha-beta sa 41.1 17 0.00059 29.8 3.0 30 23-53 24-53 (243)
59 3lte_A Response regulator; str 39.4 11 0.00039 26.3 1.4 30 9-41 1-30 (132)
60 3ius_A Uncharacterized conserv 38.3 38 0.0013 27.3 4.7 30 14-50 5-36 (286)
61 3hv2_A Response regulator/HD d 37.7 26 0.00089 25.3 3.3 38 102-145 58-95 (153)
62 3bsf_A AT4G34840, nucleosidase 37.2 1E+02 0.0036 25.1 7.3 52 125-176 190-248 (254)
63 3l3b_A ES1 family protein; ssg 36.0 38 0.0013 28.1 4.4 31 23-54 37-67 (242)
64 2fex_A Conserved hypothetical 35.9 85 0.0029 24.1 6.3 37 16-53 3-40 (188)
65 3vue_A GBSS-I, granule-bound s 35.5 26 0.0009 32.2 3.6 39 11-53 6-54 (536)
66 3gfh_A Ethanolamine utilizatio 35.2 4.9 0.00017 34.0 -1.3 51 81-133 150-201 (225)
67 2cve_A Hypothetical protein TT 34.4 29 0.00099 28.4 3.3 30 19-49 59-90 (191)
68 2r85_A PURP protein PF1517; AT 34.1 42 0.0014 27.8 4.4 33 14-52 2-34 (334)
69 3ej6_A Catalase-3; heme, hydro 34.1 44 0.0015 32.6 5.0 38 15-53 538-576 (688)
70 1vi7_A Hypothetical protein YI 33.8 31 0.0011 28.8 3.5 30 19-49 71-102 (217)
71 2geb_A Hypoxanthine-guanine ph 33.4 24 0.00082 27.7 2.6 43 13-56 97-140 (185)
72 3efe_A THIJ/PFPI family protei 33.2 1.1E+02 0.0037 24.3 6.6 37 16-53 7-51 (212)
73 4gi5_A Quinone reductase; prot 33.1 24 0.0008 30.3 2.7 36 12-48 20-59 (280)
74 2wzn_A TET3, 354AA long hypoth 32.9 43 0.0015 26.7 4.1 25 123-147 295-319 (354)
75 3eei_A 5-methylthioadenosine n 32.9 83 0.0028 25.1 5.9 48 125-172 179-231 (233)
76 1z7g_A HGPRT, HGPRTASE, hypoxa 32.7 37 0.0012 27.6 3.7 39 13-52 125-164 (217)
77 3beo_A UDP-N-acetylglucosamine 32.5 19 0.00066 30.0 2.0 41 11-51 5-46 (375)
78 4hcj_A THIJ/PFPI domain protei 32.0 22 0.00076 28.1 2.2 36 17-53 11-46 (177)
79 2ab0_A YAJL; DJ-1/THIJ superfa 32.0 63 0.0021 25.5 4.9 37 16-53 4-40 (205)
80 1hgx_A HGXPRTASE, hypoxanthine 31.4 34 0.0012 26.6 3.2 39 13-52 94-133 (183)
81 4dim_A Phosphoribosylglycinami 31.4 38 0.0013 29.2 3.8 34 12-50 5-38 (403)
82 2jbh_A Phosphoribosyltransfera 30.8 34 0.0012 27.9 3.2 39 13-52 133-172 (225)
83 2vch_A Hydroquinone glucosyltr 30.8 52 0.0018 29.6 4.7 41 9-53 1-46 (480)
84 1yfz_A Hypoxanthine-guanine ph 30.6 28 0.00096 27.8 2.6 42 13-55 117-159 (205)
85 1pzm_A HGPRT, hypoxanthine-gua 30.6 36 0.0012 27.5 3.3 42 13-55 117-159 (211)
86 2pd4_A Enoyl-[acyl-carrier-pro 30.3 96 0.0033 25.1 5.9 36 12-51 4-41 (275)
87 3s28_A Sucrose synthase 1; gly 30.2 1.9E+02 0.0064 28.4 8.9 32 100-142 405-436 (816)
88 3uk7_A Class I glutamine amido 30.2 38 0.0013 29.6 3.6 40 14-54 205-244 (396)
89 1tc1_A Protein (hypoxanthine p 30.2 33 0.0011 28.1 3.0 42 13-55 102-144 (220)
90 3dp9_A MTA/SAH nucleosidase; v 29.6 76 0.0026 25.3 5.1 48 125-172 176-228 (231)
91 1vhq_A Enhancing lycopene bios 29.3 56 0.0019 26.4 4.3 30 23-53 20-49 (232)
92 1to6_A Glycerate kinase; glyce 29.1 1.2E+02 0.0042 27.1 6.8 43 101-146 277-319 (371)
93 2xd7_A Core histone macro-H2A. 29.1 1.5E+02 0.005 23.6 6.7 68 103-172 94-163 (193)
94 2p91_A Enoyl-[acyl-carrier-pro 29.0 83 0.0028 25.7 5.3 35 12-50 19-55 (285)
95 1id1_A Putative potassium chan 29.0 55 0.0019 24.2 3.9 34 13-51 2-35 (153)
96 1vb5_A Translation initiation 28.6 63 0.0022 27.4 4.6 44 102-145 177-220 (276)
97 1ka9_H Imidazole glycerol phos 28.3 86 0.0029 24.4 5.1 33 14-50 2-34 (200)
98 2lw6_A Avrpiz-T protein; plant 27.9 9.1 0.00031 26.4 -0.7 35 80-127 43-79 (80)
99 2vyo_A ECU11_0510, chitooligos 27.8 39 0.0013 27.9 3.1 35 12-47 23-57 (254)
100 3dqp_A Oxidoreductase YLBE; al 27.6 2E+02 0.007 21.9 14.5 104 15-144 1-106 (219)
101 1vdm_A Purine phosphoribosyltr 27.3 39 0.0013 25.3 2.7 32 13-45 82-114 (153)
102 1qsg_A Enoyl-[acyl-carrier-pro 27.1 98 0.0034 24.8 5.4 35 12-50 7-43 (265)
103 2h7i_A Enoyl-[acyl-carrier-pro 27.0 1E+02 0.0034 24.9 5.4 35 12-50 5-41 (269)
104 2xgg_A Microneme protein 2; A/ 26.9 54 0.0019 24.8 3.6 32 15-49 125-158 (178)
105 3pfn_A NAD kinase; structural 26.9 68 0.0023 28.7 4.6 35 100-145 106-141 (365)
106 1fsg_A HGPRTASE, hypoxanthine- 26.9 45 0.0015 27.4 3.3 42 13-55 141-183 (233)
107 1w2w_B 5-methylthioribose-1-ph 26.3 47 0.0016 26.9 3.2 42 103-144 52-93 (191)
108 3ttv_A Catalase HPII; heme ori 26.3 59 0.002 32.0 4.4 38 14-52 600-637 (753)
109 2qxy_A Response regulator; reg 26.2 66 0.0023 22.5 3.8 26 13-41 3-28 (142)
110 3cg4_A Response regulator rece 26.0 71 0.0024 22.2 3.9 39 101-145 50-90 (142)
111 2pq6_A UDP-glucuronosyl/UDP-gl 25.9 68 0.0023 28.7 4.5 38 12-53 6-47 (482)
112 3dhn_A NAD-dependent epimerase 25.8 73 0.0025 24.5 4.2 106 14-144 4-112 (227)
113 1vch_A Phosphoribosyltransfera 25.6 49 0.0017 25.3 3.1 34 13-47 119-153 (175)
114 4fs3_A Enoyl-[acyl-carrier-pro 25.5 1.2E+02 0.0041 24.5 5.7 35 12-50 4-40 (256)
115 3ecs_A Translation initiation 25.4 60 0.0021 28.4 3.9 44 102-145 189-232 (315)
116 2vvr_A Ribose-5-phosphate isom 25.3 53 0.0018 25.8 3.2 33 15-50 2-35 (149)
117 3rht_A (gatase1)-like protein; 25.1 63 0.0022 27.3 3.9 37 14-52 4-40 (259)
118 4amg_A Snogd; transferase, pol 24.9 2E+02 0.007 23.8 7.2 32 101-145 127-158 (400)
119 1yd9_A Core histone macro-H2A. 24.8 2.6E+02 0.0089 22.2 7.6 67 103-171 91-159 (193)
120 2h8g_A 5'-methylthioadenosine 24.7 1.7E+02 0.0058 24.2 6.6 50 125-174 203-259 (267)
121 2ppw_A Conserved domain protei 24.7 67 0.0023 26.8 3.9 36 14-50 3-41 (216)
122 1n57_A Chaperone HSP31, protei 24.6 47 0.0016 28.2 3.1 31 23-54 71-101 (291)
123 3eod_A Protein HNR; response r 24.5 61 0.0021 22.2 3.3 39 101-145 50-88 (130)
124 3beo_A UDP-N-acetylglucosamine 24.5 36 0.0012 28.3 2.2 19 122-142 289-307 (375)
125 3ew7_A LMO0794 protein; Q8Y8U8 24.2 90 0.0031 23.7 4.4 33 15-51 1-33 (221)
126 1a3c_A PYRR, pyrimidine operon 23.7 51 0.0018 25.4 2.9 38 13-51 97-136 (181)
127 3grp_A 3-oxoacyl-(acyl carrier 23.7 1E+02 0.0035 25.1 4.9 43 3-50 16-59 (266)
128 3h2s_A Putative NADH-flavin re 23.6 93 0.0032 23.8 4.4 32 15-50 1-32 (224)
129 1v4v_A UDP-N-acetylglucosamine 23.3 43 0.0015 28.0 2.5 20 122-143 281-300 (376)
130 3vat_A Dnpep, aspartyl aminope 23.2 83 0.0028 29.3 4.6 47 123-170 435-486 (496)
131 2fb6_A Conserved hypothetical 23.2 30 0.001 25.6 1.4 41 8-49 3-46 (117)
132 3hdv_A Response regulator; PSI 23.1 77 0.0026 21.9 3.6 27 12-41 5-31 (136)
133 1hdo_A Biliverdin IX beta redu 23.1 1E+02 0.0035 23.0 4.6 106 15-144 4-111 (206)
134 3oy2_A Glycosyltransferase B73 23.0 81 0.0028 26.6 4.3 37 15-53 1-41 (413)
135 1dku_A Protein (phosphoribosyl 23.0 76 0.0026 27.5 4.1 36 13-49 216-252 (317)
136 1y0b_A Xanthine phosphoribosyl 22.9 58 0.002 25.5 3.1 39 13-52 119-158 (197)
137 4fay_A Microcompartments prote 22.8 30 0.001 29.8 1.4 53 81-133 176-231 (258)
138 2cc0_A Acetyl-xylan esterase; 22.7 61 0.0021 25.3 3.2 29 13-42 3-31 (195)
139 2dzd_A Pyruvate carboxylase; b 22.6 54 0.0019 29.0 3.2 36 14-54 6-41 (461)
140 3enk_A UDP-glucose 4-epimerase 22.5 1.4E+02 0.005 24.3 5.7 33 13-50 4-37 (341)
141 2iw0_A Chitin deacetylase; hyd 22.5 68 0.0023 26.4 3.6 31 11-42 38-68 (254)
142 1dcf_A ETR1 protein; beta-alph 22.5 1.1E+02 0.0036 21.2 4.3 30 9-41 2-31 (136)
143 3m6m_D Sensory/regulatory prot 22.4 67 0.0023 22.9 3.2 40 101-145 57-99 (143)
144 2c71_A Glycoside hydrolase, fa 22.4 36 0.0012 27.4 1.8 30 13-42 3-32 (216)
145 2pn1_A Carbamoylphosphate synt 22.2 1.4E+02 0.0048 24.6 5.6 34 13-51 3-37 (331)
146 2rjn_A Response regulator rece 22.2 97 0.0033 22.0 4.1 27 12-41 5-31 (154)
147 2zay_A Response regulator rece 22.2 71 0.0024 22.5 3.2 27 12-41 6-32 (147)
148 1zn8_A APRT, adenine phosphori 22.1 63 0.0021 24.9 3.1 40 13-53 119-159 (180)
149 3e8x_A Putative NAD-dependent 22.1 1.1E+02 0.0036 23.9 4.6 35 12-51 19-54 (236)
150 1ao0_A Glutamine phosphoribosy 21.8 97 0.0033 27.9 4.7 36 13-49 337-373 (459)
151 3jte_A Response regulator rece 21.7 90 0.0031 21.8 3.7 39 101-145 48-86 (143)
152 4em8_A Ribose 5-phosphate isom 21.6 1.2E+02 0.0042 23.7 4.7 37 14-52 7-43 (148)
153 1ccw_A Protein (glutamate muta 21.5 1.1E+02 0.0038 22.7 4.4 34 13-48 2-37 (137)
154 1lss_A TRK system potassium up 21.5 93 0.0032 21.8 3.8 33 14-51 4-36 (140)
155 1ny1_A Probable polysaccharide 21.3 66 0.0023 26.2 3.2 31 12-42 40-70 (240)
156 4gdh_A DJ-1, uncharacterized p 21.3 98 0.0033 24.3 4.2 38 14-54 6-43 (194)
157 1ijb_A VON willebrand factor; 21.1 1.3E+02 0.0043 23.3 4.8 31 16-49 119-153 (202)
158 3gt7_A Sensor protein; structu 21.0 91 0.0031 22.4 3.7 40 101-145 50-90 (154)
159 1lh0_A OMP synthase; loop clos 20.9 1.5E+02 0.0052 23.7 5.3 31 13-46 117-148 (213)
160 3ph3_A Ribose-5-phosphate isom 20.9 1.1E+02 0.0036 24.7 4.2 37 13-51 19-55 (169)
161 2y8u_A Chitin deacetylase; hyd 20.8 91 0.0031 25.3 4.0 31 11-42 29-59 (230)
162 1kjq_A GART 2, phosphoribosylg 20.7 1.5E+02 0.005 25.2 5.5 36 13-53 10-45 (391)
163 3gvc_A Oxidoreductase, probabl 20.6 1.2E+02 0.0042 24.8 4.8 44 2-50 15-61 (277)
164 2rdm_A Response regulator rece 20.6 1.2E+02 0.0039 20.7 4.1 38 102-145 50-88 (132)
165 1sy7_A Catalase 1; heme oxidat 20.6 1.3E+02 0.0044 29.3 5.5 40 13-53 533-572 (715)
166 2dy0_A APRT, adenine phosphori 20.5 70 0.0024 25.0 3.1 29 13-42 125-154 (190)
167 3vot_A L-amino acid ligase, BL 20.2 4.1E+02 0.014 22.8 8.4 35 14-53 5-39 (425)
168 3a11_A Translation initiation 20.2 77 0.0026 27.8 3.6 44 101-144 208-251 (338)
169 2qr3_A Two-component system re 20.2 93 0.0032 21.4 3.5 38 102-145 47-89 (140)
170 1t9k_A Probable methylthioribo 20.2 97 0.0033 27.4 4.3 43 101-143 226-268 (347)
171 3h5i_A Response regulator/sens 20.1 95 0.0032 21.7 3.6 39 101-146 49-88 (140)
172 1dhr_A Dihydropteridine reduct 20.1 1.6E+02 0.0053 23.2 5.2 35 13-52 6-41 (241)
173 3lua_A Response regulator rece 20.1 1.1E+02 0.0037 21.2 3.9 39 101-145 49-90 (140)
No 1
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=100.00 E-value=8.9e-68 Score=460.81 Aligned_cols=181 Identities=34% Similarity=0.455 Sum_probs=164.1
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCCCcCcccccCCCceeeeecccC-CceeEEeCCChHHHHHHh
Q 028146 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFD-GVTAYAVSGTPADCASLG 93 (213)
Q Consensus 15 ~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~sit~~~pl~v~~~~~~-g~~~~~v~GTPaDcV~~a 93 (213)
|||||||||||.||||++|+++|++.| +|+||||++||||+||++|+++||++++++.. +...|+|+|||+|||++|
T Consensus 1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~la 78 (247)
T 1j9j_A 1 MRILVTNDDGIQSKGIIVLAELLSEEH--EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLA 78 (247)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHHH
Confidence 799999999999999999999999877 99999999999999999999999999998643 446799999999999999
Q ss_pred hhccCCCCCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCccHHHHHHHHHHHHHHHHHH
Q 028146 94 VSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAE 173 (213)
Q Consensus 94 l~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~~ 173 (213)
|++ +++++|||||||||+|.|+|.+++||||||||+||+++||||||||+... .+.+|+.|++++++++++++
T Consensus 79 l~~-l~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~~l~-- 151 (247)
T 1j9j_A 79 YNV-VMDKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSANY----ESPDFEGAARFLIDFLKEFD-- 151 (247)
T ss_dssp HHT-TSTTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEESCS----SSCCHHHHHHHHHHHHHHCC--
T ss_pred HHh-hccCCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEecCCC----CCCCHHHHHHHHHHHHHHHH--
Confidence 996 66889999999999999999999999999999999999999999999642 23489999999998888765
Q ss_pred HHhcCCCCCcEEEecCCCCCCCCCceEEEeeeceE
Q 028146 174 IRNQTYPERCFLNIDLPTDIPNNKVNSCINILIFY 208 (213)
Q Consensus 174 ~~~~~~p~~~~lNVN~P~~~~~~~g~~~tr~~~~~ 208 (213)
+..+|++++|||||| ..++||+|+||++.++
T Consensus 152 --~~~lp~~~~lNVN~P--~~~~~g~~~tr~~~~~ 182 (247)
T 1j9j_A 152 --FSLLDPFTMLNINVP--AGEIKGWRFTRQSRRR 182 (247)
T ss_dssp --GGGSCTTCEEEEEEC--SSCCCEEEECBCCCCE
T ss_pred --HcCCCcccEEEecCC--ccccCceEEEECCCcc
Confidence 456899999999999 5679999999999873
No 2
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=100.00 E-value=4.3e-67 Score=457.20 Aligned_cols=180 Identities=36% Similarity=0.555 Sum_probs=164.1
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCCCcCcccccCCCceeeeecccCCceeEEeCCChHHHHHHhh
Q 028146 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGV 94 (213)
Q Consensus 15 ~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~sit~~~pl~v~~~~~~g~~~~~v~GTPaDcV~~al 94 (213)
|||||||||||.||||++|+++|++.| +|+||||++||||+||++|+++||++++++. +.. |+|+|||+|||++||
T Consensus 2 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~-~~~-~~v~GTPaDCV~lal 77 (251)
T 2phj_A 2 PTFLLVNDDGYFSPGINALREALKSLG--RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDT-DFY-TVIDGTPADCVHLGY 77 (251)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTSCCSCCCSSCEEEEEEET-TEE-EETTCCHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHhcC--CEEEEecCCCccCCccceecCCCeEEEEecC-CCe-EEECCCHHHHHHHHH
Confidence 899999999999999999999999987 9999999999999999999999999999863 222 999999999999999
Q ss_pred hccCCC-CCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCccHHHHHHHHHHHHHHHHHH
Q 028146 95 SQALFP-SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAE 173 (213)
Q Consensus 95 ~~~l~~-~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~~ 173 (213)
+. +++ ++|||||||||+|.|+|.+++||||||||+||+++||||||||+... ...+|+.|+++++++++++++
T Consensus 78 ~~-l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~~l~~- 151 (251)
T 2phj_A 78 RV-ILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAFGR----ENIMFEEIAKVCVDIVKKVLN- 151 (251)
T ss_dssp HT-TTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEECS----SSCCHHHHHHHHHHHHHHHHH-
T ss_pred HH-hcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcCCC----CccCHHHHHHHHHHHHHHHHh-
Confidence 96 556 78999999999999999999999999999999999999999999743 234799999999999988864
Q ss_pred HHhcCCCCCcEEEecCCCCC-CCCCceEEEeeece
Q 028146 174 IRNQTYPERCFLNIDLPTDI-PNNKVNSCINILIF 207 (213)
Q Consensus 174 ~~~~~~p~~~~lNVN~P~~~-~~~~g~~~tr~~~~ 207 (213)
..+|++++||||||.++ .++||+|+||++.+
T Consensus 152 ---~~lp~~~~lNVN~P~~~~~~~kgi~~tr~g~~ 183 (251)
T 2phj_A 152 ---EGIPEDTYLNVNIPNLRYEEIKGIKVTRQGKR 183 (251)
T ss_dssp ---HCCCTTEEEEEEEESSCGGGCCEEEECBCCCC
T ss_pred ---cCCCCCEEEEecCCCCCccccCCEEEEECccc
Confidence 46899999999999976 47999999999975
No 3
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=100.00 E-value=1.6e-67 Score=461.65 Aligned_cols=183 Identities=33% Similarity=0.509 Sum_probs=163.8
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCCCcCcccccCCCceeeeecccCCceeEEeCCChHHHH
Q 028146 11 SDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCA 90 (213)
Q Consensus 11 ~~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~sit~~~pl~v~~~~~~g~~~~~v~GTPaDcV 90 (213)
..++|||||||||||.||||++|+++|++ + |+|+||||++||||+||++|+++||++++++ ...|+|+|||+|||
T Consensus 8 ~~~~m~ILlTNDDGi~apGi~aL~~~l~~-~-~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~---~~~~~v~GTPaDCV 82 (261)
T 3ty2_A 8 ATPKLRLLLSNDDGVYAKGLAILAKTLAD-L-GEVDVVAPDRNRSGASNSLTLNAPLHIKNLE---NGMISVEGTPTDCV 82 (261)
T ss_dssp ---CCEEEEECSSCTTCHHHHHHHHHHTT-T-SEEEEEEESSCCTTCTTCCCCSSCEEEEECT---TSCEEESSCHHHHH
T ss_pred cCCCCeEEEEcCCCCCCHHHHHHHHHHHh-c-CCEEEEecCCCCcCcccceecCCCeEEEEec---CCeEEECCCHHHHH
Confidence 45679999999999999999999999998 4 6999999999999999999999999999875 33599999999999
Q ss_pred HHhhhccCCCCCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCccHHHHHHHHHHHHHHH
Q 028146 91 SLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAI 170 (213)
Q Consensus 91 ~~al~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l 170 (213)
++||+. +++.+|||||||||+|.|+|.+++||||||||+||+++||||||||+... .+.+|+.|+++++++++++
T Consensus 83 ~lal~~-l~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~~l 157 (261)
T 3ty2_A 83 HLAITG-VLPEMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLGGE----LFRYYETAAKVVYQLIQRI 157 (261)
T ss_dssp HHHTTT-TSSSCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEECSS----SCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHH-hcCCCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcCCC----CccCHHHHHHHHHHHHHHH
Confidence 999986 66789999999999999999999999999999999999999999999642 2458999999999999887
Q ss_pred HHHHHhcCCCCCcEEEecCCCCCC-CCCceEEEeeece
Q 028146 171 LAEIRNQTYPERCFLNIDLPTDIP-NNKVNSCINILIF 207 (213)
Q Consensus 171 ~~~~~~~~~p~~~~lNVN~P~~~~-~~~g~~~tr~~~~ 207 (213)
+ +..+|++++||||||.++. ++||+|+||++.+
T Consensus 158 ~----~~~lp~~~~lNVN~P~~~~~~~kGi~vtr~g~r 191 (261)
T 3ty2_A 158 E----KDPLPPSTILNINVPDLPYEELKGFEVTRLGTR 191 (261)
T ss_dssp H----HSCCCTTCEEEEEECSSCGGGCCEEEECBCCCB
T ss_pred H----hcCCCCCeEEEecCCCCCcccCCceEEEECccc
Confidence 6 3568999999999999764 7999999999976
No 4
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=100.00 E-value=8.4e-67 Score=455.46 Aligned_cols=182 Identities=36% Similarity=0.528 Sum_probs=164.3
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCCCcCcccccCCCceeeeecccCCceeEEeCCChHHHHHHh
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLG 93 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~sit~~~pl~v~~~~~~g~~~~~v~GTPaDcV~~a 93 (213)
.+||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++|+++++++ ....|+|+|||||||++|
T Consensus 1 Mp~ILlTNDDGi~apGi~~L~~~l~~~g--~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~--~~~~~~v~GTPaDCV~la 76 (251)
T 2wqk_A 1 MPTFLLVNDDGYFSPGINALREALKSLG--RVVVVAPDRNLSGVGHSLTFTEPLKMRKID--TDFYTVIDGTPADCVHLG 76 (251)
T ss_dssp -CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTSCCSCCCSSCEEEEEEE--TTEEEETTCCHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHhCC--CEEEEeeCCCCcccccCcCCCCCceeEEee--ccceeecCCChHHHHhhh
Confidence 3789999999999999999999999987 799999999999999999999999999875 234688999999999999
Q ss_pred hhccCCCCCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCccHHHHHHHHHHHHHHHHHH
Q 028146 94 VSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAE 173 (213)
Q Consensus 94 l~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~~ 173 (213)
|++++.+.+|||||||||+|.|+|.|++||||||||+||+++||||||||+... +..+|+.+++++.++++++++
T Consensus 77 l~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~~~----~~~~~~~a~~~~~~ii~~ll~- 151 (251)
T 2wqk_A 77 YRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAFGR----ENIMFEEIAKVCVDIVKKVLN- 151 (251)
T ss_dssp HHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEECS----SSCCHHHHHHHHHHHHHHHHH-
T ss_pred hhhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcccC----CCcchHHHHHHHHHHHHHHHH-
Confidence 986443568999999999999999999999999999999999999999998743 346899999999999888774
Q ss_pred HHhcCCCCCcEEEecCCCCC-CCCCceEEEeeece
Q 028146 174 IRNQTYPERCFLNIDLPTDI-PNNKVNSCINILIF 207 (213)
Q Consensus 174 ~~~~~~p~~~~lNVN~P~~~-~~~~g~~~tr~~~~ 207 (213)
..+|++++||||||+++ .+.+|+|+||++.+
T Consensus 152 ---~~~~~~~~lNVN~P~~~~~~~~g~~~t~~g~~ 183 (251)
T 2wqk_A 152 ---EGIPEDTYLNVNIPNLRYEEIKGIKVTRQGKR 183 (251)
T ss_dssp ---HCCCTTEEEEEEEESSCGGGCCEEEECBCCCC
T ss_pred ---hCCccccccccccCCCCccccCceEeeecccc
Confidence 56899999999999976 47999999999976
No 5
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=100.00 E-value=9.6e-67 Score=455.87 Aligned_cols=178 Identities=34% Similarity=0.517 Sum_probs=163.5
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCCCcCcccccCCCceeeeecccCCceeEEeC-CChHHHHHH
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVS-GTPADCASL 92 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~sit~~~pl~v~~~~~~g~~~~~v~-GTPaDcV~~ 92 (213)
.|||||||||||.||||++|+++|++.| +|+||||++||||+||++|+++||+++++. ...|+|+ |||+|||++
T Consensus 1 ~M~ILlTNDDGi~apGi~aL~~~L~~~g--~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~---~~~~~v~~GTPaDCV~l 75 (254)
T 2v4n_A 1 SMRILLSNDDGVHAPGIQTLAKALREFA--DVQVVAPDRNRSGASNSLTLESSLRTFTFD---NGDIAVQMGTPTDCVYL 75 (254)
T ss_dssp CCEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCEEEECT---TSCEEEETCCHHHHHHH
T ss_pred CCeEEEEcCCCCCCHHHHHHHHHHHhCC--cEEEEeeCCCCcCccCCcCCCCCeEEEEeC---CCCeEECCCCHHHHHHH
Confidence 3799999999999999999999999875 999999999999999999999999999874 3469999 999999999
Q ss_pred hhhccCCCCCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCccHHHHHHHHHHHHHHHHH
Q 028146 93 GVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILA 172 (213)
Q Consensus 93 al~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~ 172 (213)
||++ +++++|||||||||+|.|+|.+++|||||||||||+++||||||||+... .+|+.|++++.+++++++
T Consensus 76 al~~-ll~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~------~~~~~aa~~~~~li~~l~- 147 (254)
T 2v4n_A 76 GVNA-LMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGY------QHYDTAAAVTCALLRGLS- 147 (254)
T ss_dssp HHHT-TSSSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEESSS------SCHHHHHHHHHHHHHHHH-
T ss_pred HHhh-ccCCCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEecCcc------cCHHHHHHHHHHHHHHHH-
Confidence 9996 66789999999999999999999999999999999999999999999531 379999999999988876
Q ss_pred HHHhcCCCCCcEEEecCCCCC-CCCCceEEEeeece
Q 028146 173 EIRNQTYPERCFLNIDLPTDI-PNNKVNSCINILIF 207 (213)
Q Consensus 173 ~~~~~~~p~~~~lNVN~P~~~-~~~~g~~~tr~~~~ 207 (213)
+..+|++++||||||.++ .++||+|+||++.+
T Consensus 148 ---~~~lp~~~~lNVN~P~~~~~~~kg~~~tr~g~~ 180 (254)
T 2v4n_A 148 ---REPLRTGRILNVNVPDLPLAQVKGIRVTRCGSR 180 (254)
T ss_dssp ---HSCCCSCSEEEEEECSSCGGGCCCEEECBCCEE
T ss_pred ---HcCCCccceEEecCCCCCcccCCceEEEECCcc
Confidence 467899999999999976 47999999999976
No 6
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=100.00 E-value=2.2e-66 Score=451.32 Aligned_cols=177 Identities=37% Similarity=0.539 Sum_probs=160.0
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCCCcCcccccCCCceeeeecccC----CceeEEeCCChHHHH
Q 028146 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFD----GVTAYAVSGTPADCA 90 (213)
Q Consensus 15 ~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~sit~~~pl~v~~~~~~----g~~~~~v~GTPaDcV 90 (213)
|||||||||||.||||++|+++|++.| +|+||||++||||+||++|+++||++++++.. +...|+|+|||+|||
T Consensus 1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGIYSPGLWALAEAASQFG--EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 799999999999999999999999877 99999999999999999999999999998642 346799999999999
Q ss_pred HHhhhccCCCCCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCccHHHHHHHHHHHHHHH
Q 028146 91 SLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAI 170 (213)
Q Consensus 91 ~~al~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l 170 (213)
++||+ | +++|||||||||+|.|+|.+++||||||||+||+++||||||||+.... .+.+|+.|++++.++++++
T Consensus 79 ~lal~--l-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~~---~~~~~~~aa~~~~~li~~l 152 (244)
T 2e6c_A 79 ALGLH--L-FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVPLNG---EVPDFAGLRPWLLRTLETL 152 (244)
T ss_dssp HHHHH--H-SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEECCSS---SCCCHHHHHHHHHHHHHHH
T ss_pred HHHHc--C-CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEeccCCC---CCCCHHHHHHHHHHHHHHH
Confidence 99997 4 6799999999999999999999999999999999999999999996321 1248999999999998887
Q ss_pred HHHHHhcCCCCCcEEEecCCCCCCCCCceEEEeeeceE
Q 028146 171 LAEIRNQTYPERCFLNIDLPTDIPNNKVNSCINILIFY 208 (213)
Q Consensus 171 ~~~~~~~~~p~~~~lNVN~P~~~~~~~g~~~tr~~~~~ 208 (213)
++ . |++++|||||| .+++|+|+||++.++
T Consensus 153 ~~----~--p~~~~lNVN~P---~~~~g~~~tr~g~~~ 181 (244)
T 2e6c_A 153 LR----L--ERPFLVNVNLP---LRPKGFLWTRQSVRA 181 (244)
T ss_dssp TT----S--CSSCEEEEECC---SSCCEEEECBCCCCC
T ss_pred Hh----C--CcCcEEEeeCC---CccCCeEEEECCCCc
Confidence 63 3 88999999999 568999999999863
No 7
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=100.00 E-value=3.8e-66 Score=457.58 Aligned_cols=184 Identities=29% Similarity=0.442 Sum_probs=164.4
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCCCcCcccccCCCceeeeecccCCceeEEeCCChHHHHHHhh
Q 028146 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGV 94 (213)
Q Consensus 15 ~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~sit~~~pl~v~~~~~~g~~~~~v~GTPaDcV~~al 94 (213)
|||||||||||.||||++|+++|++.| +|+||||++||||+||++|+++||++++++..+...|+|+|||+|||++||
T Consensus 1 M~ILlTNDDGi~ApGi~aL~~aL~~~g--~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaDCV~lal 78 (280)
T 1l5x_A 1 MKILVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYLAT 78 (280)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHGGGS--EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHHHHHHHH
Confidence 799999999999999999999999987 999999999999999999999999999986544467999999999999999
Q ss_pred hccCCCCCCcEEEecCCCCCcCccc-ccchhhHHHHHHHHHcCCCEEEEEeecCCCCCC---CccHHHHHHHHHHHHHHH
Q 028146 95 SQALFPSVPDLVISGINMGSNCGYH-VVYSGTVAGAREAFFHGVPSVSISYDWVGGKSN---VNDYTLAAEACLPIINAI 170 (213)
Q Consensus 95 ~~~l~~~~PDLVvSGIN~G~N~g~d-v~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~---~~~~~~aa~~~~~li~~l 170 (213)
+. + +++|||||||||+|.|+|.+ ++|||||||||||+++||||||||+........ ..+|+.|+++++++++++
T Consensus 79 ~~-l-~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~~~~~~~~~~~~~~~~~aa~~~~~lv~~l 156 (280)
T 1l5x_A 79 FG-L-GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAYLENWNELLNNKEAVEIMGAVVSSTASYV 156 (280)
T ss_dssp HH-H-TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEECCSCHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hc-C-CCCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEccccCCCcccccccCHHHHHHHHHHHHHHH
Confidence 86 6 77999999999999999999 999999999999999999999999963111100 137999999999999887
Q ss_pred HHHHHhcCCCCCc-EEEecCCCCCC-CCCceEEEeeece
Q 028146 171 LAEIRNQTYPERC-FLNIDLPTDIP-NNKVNSCINILIF 207 (213)
Q Consensus 171 ~~~~~~~~~p~~~-~lNVN~P~~~~-~~~g~~~tr~~~~ 207 (213)
++ ..+|+++ +||||||.++. ++| +|+||++.+
T Consensus 157 ~~----~~lp~~~d~LNVN~P~~~~~~~k-~~~tr~g~~ 190 (280)
T 1l5x_A 157 LK----NGMPQGVDVISVNFPRRLGRGVR-AKLVKAAKL 190 (280)
T ss_dssp HH----HCSCTTCSEEEEEECSCCCTTCC-EEECBCCSC
T ss_pred Hh----cCCCCCCceEEecCCCCCCCCce-EEEEECCCc
Confidence 64 4689999 99999999874 788 999999976
No 8
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=95.61 E-value=0.0074 Score=52.82 Aligned_cols=44 Identities=11% Similarity=0.054 Sum_probs=28.8
Q ss_pred ccccCCCCCCeEEEecCCCCC-CccHHHHHHHHHhcCCceEEEEec
Q 028146 6 IAIVNSDHKPTIMVTNDDGID-APGLRSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 6 ~~~~~~~~~~~ILlTNDDGi~-s~Gi~aL~~aL~~~g~~~V~VVAP 50 (213)
+........||||++...|.. --....|+++|++.| |+|.|++|
T Consensus 12 ~~~~~~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~G-heV~v~~~ 56 (398)
T 3oti_A 12 SSGHIEGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAG-HDVLIAVA 56 (398)
T ss_dssp -------CCCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEES
T ss_pred cccchhhhcCEEEEEcCCCcchHhHHHHHHHHHHHCC-CEEEEecc
Confidence 333345567999999764321 123578999999999 89999998
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=94.90 E-value=0.091 Score=45.76 Aligned_cols=45 Identities=16% Similarity=0.240 Sum_probs=28.4
Q ss_pred ccccccCCCCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCceEEEEecCC
Q 028146 4 RGIAIVNSDHKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 4 ~~~~~~~~~~~~~ILlTNDDGi~s~G----i~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
|++.+.+...+||||++.-- +.| ...|+++|++.| |+|+++++..
T Consensus 10 ~~~~~~~~~~m~rIl~~~~~---~~GHv~p~l~La~~L~~~G-h~V~v~~~~~ 58 (415)
T 3rsc_A 10 HSSGHIEGRHMAHLLIVNVA---SHGLILPTLTVVTELVRRG-HRVSYVTAGG 58 (415)
T ss_dssp ---------CCCEEEEECCS---CHHHHGGGHHHHHHHHHTT-CEEEEEECGG
T ss_pred cccCCcCcccCCEEEEEeCC---CccccccHHHHHHHHHHCC-CEEEEEeCHH
Confidence 34455556678999998742 333 578999999999 8999999643
No 10
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=94.69 E-value=0.16 Score=43.96 Aligned_cols=45 Identities=7% Similarity=-0.042 Sum_probs=28.2
Q ss_pred ccccCCCCCCeEEEecCCCC-CCccHHHHHHHHHhcCCceEEEEecC
Q 028146 6 IAIVNSDHKPTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPD 51 (213)
Q Consensus 6 ~~~~~~~~~~~ILlTNDDGi-~s~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (213)
+..-....+||||++.--+. +.-....|+++|++.| |+|.++++.
T Consensus 12 ~~~~~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~G-heV~v~~~~ 57 (412)
T 3otg_A 12 SSGHIEGRHMRVLFASLGTHGHTYPLLPLATAARAAG-HEVTFATGE 57 (412)
T ss_dssp ------CCSCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEECG
T ss_pred ccCCcccceeEEEEEcCCCcccHHHHHHHHHHHHHCC-CEEEEEccH
Confidence 33344567899998872211 0112458999999999 899999874
No 11
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=94.17 E-value=0.025 Score=49.28 Aligned_cols=41 Identities=20% Similarity=0.114 Sum_probs=27.6
Q ss_pred CCCCCCeEEEecCCCCC-CccHHHHHHHHHhcCCceEEEEecC
Q 028146 10 NSDHKPTIMVTNDDGID-APGLRSLVRVLVSTNRYTVQVCAPD 51 (213)
Q Consensus 10 ~~~~~~~ILlTNDDGi~-s~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (213)
....+||||++..-+.. .-.+..|+++|++.| |+|.|+++.
T Consensus 11 ~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~G-heV~v~~~~ 52 (398)
T 4fzr_A 11 PRGSHMRILVIAGCSEGFVMPLVPLSWALRAAG-HEVLVAASE 52 (398)
T ss_dssp ----CCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEEEG
T ss_pred CCCCceEEEEEcCCCcchHHHHHHHHHHHHHCC-CEEEEEcCH
Confidence 35567999988653211 122578999999999 899999974
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=93.68 E-value=0.16 Score=43.50 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=26.5
Q ss_pred CCeEEEecCCCC-CCccHHHHHHHHHhcCCceEEEEecC
Q 028146 14 KPTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPD 51 (213)
Q Consensus 14 ~~~ILlTNDDGi-~s~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (213)
++|||++.--|. +.--+..|+++|++.| |+|+++++.
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~G-heV~v~~~~ 41 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRG-HRITYVTTP 41 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTT-CEEEEEECH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCC-CEEEEEcCH
Confidence 358998864321 1122678999999999 899999874
No 13
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=93.15 E-value=0.42 Score=41.86 Aligned_cols=38 Identities=24% Similarity=0.200 Sum_probs=29.4
Q ss_pred CCCeEEEecCCCCCCcc----HHHHHHHHHhcCCceEEEEecCCCC
Q 028146 13 HKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSEK 54 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G----i~aL~~aL~~~g~~~V~VVAP~~~~ 54 (213)
.+||||+.. ..+.| +..|+++|++.| |+|+++++...+
T Consensus 11 ~~~~Il~~~---~~~~GHv~p~l~la~~L~~~G-h~V~~~~~~~~~ 52 (424)
T 2iya_A 11 TPRHISFFN---IPGHGHVNPSLGIVQELVARG-HRVSYAITDEFA 52 (424)
T ss_dssp CCCEEEEEC---CSCHHHHHHHHHHHHHHHHTT-CEEEEEECGGGH
T ss_pred ccceEEEEe---CCCCcccchHHHHHHHHHHCC-CeEEEEeCHHHH
Confidence 457999983 44445 578999999999 899999987643
No 14
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=93.03 E-value=0.13 Score=44.47 Aligned_cols=37 Identities=16% Similarity=0.128 Sum_probs=26.6
Q ss_pred CCeEEEecCCCC-CCccHHHHHHHHHhcCCceEEEEecC
Q 028146 14 KPTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPD 51 (213)
Q Consensus 14 ~~~ILlTNDDGi-~s~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (213)
+||||++-.-+. +--....|+++|++.| |+|.++++.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~G-heV~v~~~~ 38 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASG-HEVLIAAPP 38 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTT-CEEEEEECH
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCC-CEEEEecCh
Confidence 489988865321 1122478999999999 899999863
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=92.59 E-value=0.52 Score=41.16 Aligned_cols=37 Identities=22% Similarity=0.186 Sum_probs=27.2
Q ss_pred CCCeEEEecCCCCCCcc----HHHHHHHHHhcCCceEEEEecCCC
Q 028146 13 HKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
.+||||+..- .+.| +..|+++|++.| |+|+++.+...
T Consensus 6 ~m~kIl~~~~---~~~Gh~~p~~~la~~L~~~G-~~V~~~~~~~~ 46 (430)
T 2iyf_A 6 TPAHIAMFSI---AAHGHVNPSLEVIRELVARG-HRVTYAIPPVF 46 (430)
T ss_dssp --CEEEEECC---SCHHHHGGGHHHHHHHHHTT-CEEEEEECGGG
T ss_pred ccceEEEEeC---CCCccccchHHHHHHHHHCC-CeEEEEeCHHH
Confidence 3579998753 3334 578999999999 89999998653
No 16
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=89.21 E-value=0.66 Score=39.78 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=31.5
Q ss_pred CCCeEEEecCCCCC--Ccc----HHHHHHHHHhcCCceEEEEecCCCC
Q 028146 13 HKPTIMVTNDDGID--APG----LRSLVRVLVSTNRYTVQVCAPDSEK 54 (213)
Q Consensus 13 ~~~~ILlTNDDGi~--s~G----i~aL~~aL~~~g~~~V~VVAP~~~~ 54 (213)
++||||+..+.-.. .-| +..|+++|.+.| |+|.|++|....
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G-~~V~v~~~~~~~ 47 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLG-HEVLVFTPSHGR 47 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTT-CEEEEEEECTTC
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCC-CeEEEEecCCCC
Confidence 47999998866433 222 778999999999 899999987654
No 17
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=84.36 E-value=0.99 Score=38.68 Aligned_cols=37 Identities=8% Similarity=0.009 Sum_probs=28.9
Q ss_pred CCCeEEEecCCCCCCcc----HHHHHHHHHhcCCceEEEEecCCC
Q 028146 13 HKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
+.||||++. +.+.| +.+|+++|.+.| |+|+++.+...
T Consensus 21 ~~MRIL~~~---~p~~GHv~P~l~LA~~L~~rG-h~Vt~~t~~~~ 61 (400)
T 4amg_A 21 QSMRALFIT---SPGLSHILPTVPLAQALRALG-HEVRYATGGDI 61 (400)
T ss_dssp CCCEEEEEC---CSSHHHHGGGHHHHHHHHHTT-CEEEEEECSST
T ss_pred CCCeEEEEC---CCchhHHHHHHHHHHHHHHCC-CEEEEEeCcch
Confidence 579999984 33333 568999999999 89999987643
No 18
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=82.61 E-value=0.85 Score=38.29 Aligned_cols=41 Identities=12% Similarity=0.058 Sum_probs=29.7
Q ss_pred CCCeEEEecCC---------------CCC--CccHHHHHHHHHhcCCceEEEEecCCCC
Q 028146 13 HKPTIMVTNDD---------------GID--APGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (213)
Q Consensus 13 ~~~~ILlTNDD---------------Gi~--s~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (213)
++||||+.++. ... ..-+..|+++|.+.| |+|.|+.+....
T Consensus 2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G-~~v~v~~~~~~~ 59 (342)
T 2iuy_A 2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG-HEVFLLGAPGSP 59 (342)
T ss_dssp -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT-CEEEEESCTTSC
T ss_pred CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC-CeEEEEecCCCC
Confidence 45899999876 111 123677899999998 899999987643
No 19
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=81.50 E-value=2 Score=38.29 Aligned_cols=41 Identities=12% Similarity=0.151 Sum_probs=30.5
Q ss_pred CCCCeEEEecCCCCCC------------cc----HHHHHHHHHhcCCceEEEEecCCC
Q 028146 12 DHKPTIMVTNDDGIDA------------PG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~s------------~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
.++||||+.++..+.. -| +..|+++|.+.| |+|.|+++...
T Consensus 5 ~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~ 61 (499)
T 2r60_A 5 TRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG-VQVDIITRRIK 61 (499)
T ss_dssp --CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred cccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcC-CeEEEEeCCCC
Confidence 3469999999876432 22 577899999999 89999998653
No 20
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=81.08 E-value=1.3 Score=39.11 Aligned_cols=43 Identities=14% Similarity=0.217 Sum_probs=28.7
Q ss_pred ccccCCCCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCceEEEEecCC
Q 028146 6 IAIVNSDHKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 6 ~~~~~~~~~~~ILlTNDDGi~s~G----i~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
+........||||++ +..+.| ..+|+++|++.| |+|+++++..
T Consensus 12 ~~~~~~~~~mrIl~~---~~~~~GHv~p~l~la~~L~~~G-heV~~~~~~~ 58 (441)
T 2yjn_A 12 SGLVPRGSHMRVVFS---SMASKSHLFGLVPLAWAFRAAG-HEVRVVASPA 58 (441)
T ss_dssp -------CCCEEEEE---CCSCHHHHTTTHHHHHHHHHTT-CEEEEEECGG
T ss_pred ccccccCCccEEEEE---cCCCcchHhHHHHHHHHHHHCC-CeEEEEeCch
Confidence 334445677999999 334333 568899999999 8999999865
No 21
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=79.68 E-value=2.6 Score=35.68 Aligned_cols=45 Identities=24% Similarity=0.214 Sum_probs=29.7
Q ss_pred cCCCCCCeEEEecCCCCCC-----ccHHHHHHHHHhcCCceEEEEecCCCC
Q 028146 9 VNSDHKPTIMVTNDDGIDA-----PGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (213)
Q Consensus 9 ~~~~~~~~ILlTNDDGi~s-----~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (213)
|...++||||+..+.-... .-+..|+++|.+.| |+|+++++....
T Consensus 15 ~~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~ 64 (406)
T 2gek_A 15 VPRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAG-HEVSVLAPASPH 64 (406)
T ss_dssp ------CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTT-CEEEEEESCCTT
T ss_pred ccCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCC-CeEEEEecCCcc
Confidence 3456789999998653332 23667899999998 799999987654
No 22
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=76.36 E-value=2.9 Score=36.04 Aligned_cols=42 Identities=10% Similarity=0.109 Sum_probs=30.7
Q ss_pred CCCCCeEEEecCCCCC--------Ccc----HHHHHHHHHhcCCceEEEEecCCC
Q 028146 11 SDHKPTIMVTNDDGID--------APG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 11 ~~~~~~ILlTNDDGi~--------s~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
..++||||+.+++-.. .-| +..|+++|.+.| |+|.|+++...
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~ 70 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG-IEVDIYTRATR 70 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC-CEEEEEecCCC
Confidence 4567999999986543 123 578889999999 89999998653
No 23
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=72.62 E-value=3.4 Score=34.84 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=30.4
Q ss_pred CCCeEEEecC------C----CCCCccHHHHHHHHHhcCCceEEEEecCCCC
Q 028146 13 HKPTIMVTND------D----GIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (213)
Q Consensus 13 ~~~~ILlTND------D----Gi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (213)
++.-|++||- | |++..=+..-++.|+++| ++|.+++|...+
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG-~~V~~aSp~g~~ 60 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAG-FEVDVASETGTF 60 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTT-CEEEEEESSSCC
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCC-CEEEEEeCCCCc
Confidence 3344667882 2 666666778889999999 799999997654
No 24
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=71.57 E-value=2.5 Score=35.56 Aligned_cols=40 Identities=10% Similarity=0.120 Sum_probs=29.9
Q ss_pred CCeEEEecC----------CCCCCccHHHHHHHHHhcCCceEEEEecCCCC
Q 028146 14 KPTIMVTND----------DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (213)
Q Consensus 14 ~~~ILlTND----------DGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (213)
+.-|++||= +|++..=+..-++.|+++| ++|.+++|....
T Consensus 5 kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG-~~V~iaS~~g~~ 54 (244)
T 3kkl_A 5 RALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHG-FEVDFVSETGGF 54 (244)
T ss_dssp EEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTT-CEEEEEESSSCC
T ss_pred EEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCC-CEEEEEeCCCCC
Confidence 444677772 4566666777899999999 799999997554
No 25
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=69.73 E-value=2.6 Score=37.17 Aligned_cols=37 Identities=11% Similarity=0.143 Sum_probs=28.3
Q ss_pred CeEEEecCCCCC---Ccc----HHHHHHHHHhcCCceEEEEecCC
Q 028146 15 PTIMVTNDDGID---APG----LRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 15 ~~ILlTNDDGi~---s~G----i~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
||||+..+.-.. .-| +..|+++|.+.| |+|.|++|..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHG-VRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcC-CeEEEEeccc
Confidence 789998876432 123 567899999999 8999999864
No 26
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=69.36 E-value=3.6 Score=34.40 Aligned_cols=37 Identities=8% Similarity=0.017 Sum_probs=27.2
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCceEEEEecCC
Q 028146 15 PTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 15 ~~ILlTNDDGi~s~G----i~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
||||+..+.-...-| +..|+++|.+.| |+|.|+++..
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~ 41 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARG-HHVRVYTQSW 41 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTT-CCEEEEESEE
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCC-CeEEEEecCC
Confidence 688888765333333 678999999999 8999999863
No 27
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=69.33 E-value=8.3 Score=33.40 Aligned_cols=32 Identities=16% Similarity=0.276 Sum_probs=22.4
Q ss_pred CCeEEEecCCCCCCcc----HHHHHHHHHhcCCceEEEEe
Q 028146 14 KPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCA 49 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~G----i~aL~~aL~~~g~~~V~VVA 49 (213)
+.||||+-= .+-| -.+|+++|++.| |+|..+.
T Consensus 2 ~~~i~i~~G---GTgGHi~palala~~L~~~g-~~V~~vg 37 (365)
T 3s2u_A 2 KGNVLIMAG---GTGGHVFPALACAREFQARG-YAVHWLG 37 (365)
T ss_dssp -CEEEEECC---SSHHHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCcEEEEcC---CCHHHHHHHHHHHHHHHhCC-CEEEEEE
Confidence 457898831 2223 367999999999 8998775
No 28
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=68.11 E-value=3 Score=36.79 Aligned_cols=37 Identities=11% Similarity=0.169 Sum_probs=28.0
Q ss_pred CeEEEecCCCCC---Ccc----HHHHHHHHHhcCCceEEEEecCC
Q 028146 15 PTIMVTNDDGID---APG----LRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 15 ~~ILlTNDDGi~---s~G----i~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
||||+..+.-.. .-| +..|+++|.+.| |+|.|++|..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADG-VDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTT-CEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcC-CEEEEEecCc
Confidence 789988875322 223 567899999999 8999999864
No 29
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=65.95 E-value=8.6 Score=30.16 Aligned_cols=33 Identities=15% Similarity=0.231 Sum_probs=28.8
Q ss_pred EEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCC
Q 028146 17 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 17 ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
||+. ||++...+...++.|+..| .+|.+++|..
T Consensus 10 ill~--~g~~~~e~~~~~~~l~~ag-~~v~~~s~~~ 42 (190)
T 4e08_A 10 VILA--PGAEEMEFIIAADVLRRAG-IKVTVAGLNG 42 (190)
T ss_dssp EEEC--TTCCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred EEEC--CCchHHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 4554 8999999999999999999 6999999986
No 30
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=65.86 E-value=5.8 Score=33.21 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=26.0
Q ss_pred CeEEEecCCCCCCccH-H---HHHHHHHhcCCceEEEEecCC
Q 028146 15 PTIMVTNDDGIDAPGL-R---SLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 15 ~~ILlTNDDGi~s~Gi-~---aL~~aL~~~g~~~V~VVAP~~ 52 (213)
||||+.. .|. .|- + .|+++|.+.| |+|.++.+..
T Consensus 7 mkIl~~~-~~~--gG~~~~~~~la~~L~~~G-~~V~v~~~~~ 44 (364)
T 1f0k_A 7 KRLMVMA-GGT--GGHVFPGLAVAHHLMAQG-WQVRWLGTAD 44 (364)
T ss_dssp CEEEEEC-CSS--HHHHHHHHHHHHHHHTTT-CEEEEEECTT
T ss_pred cEEEEEe-CCC--ccchhHHHHHHHHHHHcC-CEEEEEecCC
Confidence 8999987 232 243 3 7999999998 8999999865
No 31
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=64.76 E-value=11 Score=32.28 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=29.0
Q ss_pred CCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCceEEEEecCC
Q 028146 12 DHKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~s~G----i~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
+++||||+.++.. ..-| +..|+++|.+.| |+|.|+....
T Consensus 38 ~~~mkIl~v~~~~-~~GG~~~~~~~l~~~L~~~G-~~v~v~~~~~ 80 (416)
T 2x6q_A 38 LKGRSFVHVNSTS-FGGGVAEILHSLVPLLRSIG-IEARWFVIEG 80 (416)
T ss_dssp TTTCEEEEEESCS-SSSTHHHHHHHHHHHHHHTT-CEEEEEECCC
T ss_pred hhccEEEEEeCCC-CCCCHHHHHHHHHHHHHhCC-CeEEEEEccC
Confidence 4679999988763 3334 446888999998 8999887754
No 32
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=62.92 E-value=10 Score=30.57 Aligned_cols=41 Identities=17% Similarity=0.348 Sum_probs=31.8
Q ss_pred CCCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEEEecCCC
Q 028146 12 DHKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
.++.+|||. ||++.+-+ ++++.+.|++.|-..|.+++|-..
T Consensus 118 ~~gk~VllV-DDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~ 159 (208)
T 1wd5_A 118 RKGRDVVLV-DDGVATGASMEAALSVVFQEGPRRVVVAVPVAS 159 (208)
T ss_dssp CTTSEEEEE-CSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBC
T ss_pred CCCCEEEEE-CCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcC
Confidence 356788888 99999743 788889999988666888887543
No 33
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=62.16 E-value=7 Score=29.55 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=25.1
Q ss_pred CCCcEEEecCCCCCcCcccccchhhHHHHHHH--HHcCCCEEEEEee
Q 028146 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREA--FFHGVPSVSISYD 145 (213)
Q Consensus 101 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea--~~~GiPaIAvS~~ 145 (213)
.+||||++-++.-.=-|.+ +-..+.+ ....+|.|.+|..
T Consensus 56 ~~~DlillD~~MP~mdG~e------l~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGID------LLKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp HCCSEEEEESCCSSSCHHH------HHHHHHHSTTTTTCCEEEEESS
T ss_pred CCCCEEEEcCCCCCCCHHH------HHHHHHhCCCCCCCeEEEEECC
Confidence 3799999999985444433 2222222 2367999999964
No 34
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=61.08 E-value=5.6 Score=34.56 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=26.3
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCceEEEEecCC
Q 028146 15 PTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 15 ~~ILlTNDDGi~s~G----i~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
||||++ +..+.| ..+|+++|++.| |+|+++++..
T Consensus 1 MrIl~~---~~~~~GH~~p~l~la~~L~~~G-h~V~~~~~~~ 38 (416)
T 1rrv_A 1 MRVLLS---VCGTRGDVEIGVALADRLKALG-VQTRMCAPPA 38 (416)
T ss_dssp CEEEEE---EESCHHHHHHHHHHHHHHHHTT-CEEEEEECGG
T ss_pred CeEEEE---ecCCCccHHHHHHHHHHHHHCC-CeEEEEeCHH
Confidence 678887 233444 568899999999 8999999865
No 35
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=60.98 E-value=8.1 Score=33.58 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=27.5
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCceEEEEecCCC
Q 028146 15 PTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 15 ~~ILlTNDDGi~s~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
||||++- ..+.| ..+|+++|++.| |+|+++.+...
T Consensus 1 M~Il~~~---~~~~GHv~P~l~la~~L~~~G-h~V~~~~~~~~ 39 (415)
T 1iir_A 1 MRVLLAT---CGSRGDTEPLVALAVRVRDLG-ADVRMCAPPDC 39 (415)
T ss_dssp CEEEEEC---CSCHHHHHHHHHHHHHHHHTT-CEEEEEECGGG
T ss_pred CeEEEEc---CCCchhHHHHHHHHHHHHHCC-CeEEEEcCHHH
Confidence 6888883 44445 677899999999 89999998763
No 36
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=60.78 E-value=9.5 Score=31.44 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=23.0
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEe
Q 028146 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCA 49 (213)
Q Consensus 15 ~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVA 49 (213)
||||||==-|+- | +.|++.|.+.| |+|+++.
T Consensus 1 MkILVTGatGfI--G-~~L~~~L~~~G-~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGGGTGFI--G-TALTQLLNARG-HEVTLVS 31 (298)
T ss_dssp CEEEEETTTSHH--H-HHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCCHH--H-HHHHHHHHHCC-CEEEEEE
Confidence 789999332321 2 67899999999 8999885
No 37
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=59.52 E-value=3.3 Score=36.20 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=26.4
Q ss_pred CeEEEecCCCC-CCccHHHHHHHHHhcCCceEEEEecCC
Q 028146 15 PTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 15 ~~ILlTNDDGi-~s~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
||||++-+... +.-.+.+|+++|++.| |+|+|++|..
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~G-h~V~v~~~~~ 38 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELG-ADARMCLPPD 38 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTT-CCEEEEECGG
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCC-CeEEEEeCHH
Confidence 67888764321 1123778999999999 8999999854
No 38
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=57.24 E-value=22 Score=28.39 Aligned_cols=40 Identities=23% Similarity=0.302 Sum_probs=32.2
Q ss_pred CCeEEEec-----C---CCCCCccHHHHHHHHHhcCCceEEEEecCCCC
Q 028146 14 KPTIMVTN-----D---DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (213)
Q Consensus 14 ~~~ILlTN-----D---DGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (213)
+.-||++| | ||+...-+...++.|+..| ++|.+++|....
T Consensus 7 kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag-~~v~~vs~~~~~ 54 (224)
T 1u9c_A 7 RVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKG-YDVKVASIQGGE 54 (224)
T ss_dssp EEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTT-CEEEEEESSCBC
T ss_pred eEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCC-CeEEEECCCCCc
Confidence 34477774 2 8888888999999999998 699999998653
No 39
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=55.90 E-value=12 Score=31.74 Aligned_cols=34 Identities=18% Similarity=0.239 Sum_probs=26.1
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCceEEEEecCC
Q 028146 15 PTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 15 ~~ILlTNDDGi~s~G----i~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
||||+...- +.| ..+|+++|++.| |+|+++++..
T Consensus 1 MrIl~~~~~---~~Gh~~p~~~la~~L~~~G-h~V~~~~~~~ 38 (384)
T 2p6p_A 1 MRILFVAAG---SPATVFALAPLATAARNAG-HQVVMAANQD 38 (384)
T ss_dssp CEEEEECCS---SHHHHHHHHHHHHHHHHTT-CEEEEEECGG
T ss_pred CEEEEEeCC---ccchHhHHHHHHHHHHHCC-CEEEEEeCHH
Confidence 689998553 233 468899999999 8999998754
No 40
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=55.39 E-value=26 Score=27.52 Aligned_cols=40 Identities=15% Similarity=0.100 Sum_probs=32.7
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCC
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (213)
.++|++-=-||.+...+...++.|+..| .+|.+++|....
T Consensus 23 ~~kV~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~~ 62 (193)
T 1oi4_A 23 SKKIAVLITDEFEDSEFTSPADEFRKAG-HEVITIEKQAGK 62 (193)
T ss_dssp CCEEEEECCTTBCTHHHHHHHHHHHHTT-CEEEEEESSTTC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCC-CEEEEEECCCCc
Confidence 4566665558999999999999999998 699999997643
No 41
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=51.74 E-value=14 Score=28.16 Aligned_cols=38 Identities=13% Similarity=0.137 Sum_probs=31.9
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCC
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
.+||++-=-||++..-+-..++.|+..| .+|.+++|..
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRIKEEG-HEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred CcEEEEEeCCCccHHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 4666666668999999999999999998 6999999965
No 42
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=51.57 E-value=11 Score=26.77 Aligned_cols=30 Identities=27% Similarity=0.305 Sum_probs=17.2
Q ss_pred cCCCCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 028146 9 VNSDHKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (213)
Q Consensus 9 ~~~~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g 41 (213)
|++..+++|||..||-... ..|.+.|.+.|
T Consensus 1 M~~~~~~~iLivdd~~~~~---~~l~~~l~~~g 30 (140)
T 3grc_A 1 MSLAPRPRILICEDDPDIA---RLLNLMLEKGG 30 (140)
T ss_dssp ----CCSEEEEECSCHHHH---HHHHHHHHHTT
T ss_pred CCCCCCCCEEEEcCCHHHH---HHHHHHHHHCC
Confidence 5666789999999985443 33445555555
No 43
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=50.39 E-value=10 Score=33.64 Aligned_cols=41 Identities=10% Similarity=0.038 Sum_probs=28.9
Q ss_pred CCCCCeEEEecCCCCC---Ccc---HHHHHHHHHhcCCceEEEEecCC
Q 028146 11 SDHKPTIMVTNDDGID---APG---LRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 11 ~~~~~~ILlTNDDGi~---s~G---i~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
..++|||++.-+.=.. +-| +..|+++|.+.| |+|.|++|..
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~G-heV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKK-FKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTT-CEEEEEESSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcC-CceEEEEecC
Confidence 4578999888754111 122 566777888889 8999999964
No 44
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=49.27 E-value=15 Score=32.20 Aligned_cols=44 Identities=11% Similarity=0.132 Sum_probs=25.1
Q ss_pred cccccccCCCCCCeEEEecCCCCC---CccHHHHHHHHHhcCCceEEEE
Q 028146 3 RRGIAIVNSDHKPTIMVTNDDGID---APGLRSLVRVLVSTNRYTVQVC 48 (213)
Q Consensus 3 ~~~~~~~~~~~~~~ILlTNDDGi~---s~Gi~aL~~aL~~~g~~~V~VV 48 (213)
+.-.+.|...++||||+.++.++. ......+++.|.+.| +|.|+
T Consensus 3 ~~~~~~~~~~~~MkIl~is~~~~p~~~~~~~~~l~~~l~~~G--~V~vi 49 (406)
T 2hy7_A 3 VSPAAPASGIRRPCYLVLSSHDFRTPRRANIHFITDQLALRG--TTRFF 49 (406)
T ss_dssp ----------CCSCEEEEESSCTTSSSCCHHHHHHHHHHHHS--CEEEE
T ss_pred CCCCCCCCCCCCceEEEEecccCCChhhhhHhHHHHHHHhCC--ceEEE
Confidence 334456777788999988876433 112456788888887 99999
No 45
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=48.85 E-value=25 Score=28.55 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=24.5
Q ss_pred CCCeEEEecCCCCCCccH--HHHHHHHHhcCCceEEEEecCC
Q 028146 13 HKPTIMVTNDDGIDAPGL--RSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~Gi--~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
+.|+|||| | + |. +.|++.|.+.| ++|+++.-..
T Consensus 2 ~~~~ilVt---G--a-G~iG~~l~~~L~~~g-~~V~~~~r~~ 36 (286)
T 3gpi_A 2 SLSKILIA---G--C-GDLGLELARRLTAQG-HEVTGLRRSA 36 (286)
T ss_dssp CCCCEEEE---C--C-SHHHHHHHHHHHHTT-CCEEEEECTT
T ss_pred CCCcEEEE---C--C-CHHHHHHHHHHHHCC-CEEEEEeCCc
Confidence 35789999 6 3 43 56788888888 7998886543
No 46
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=48.40 E-value=4.2 Score=34.15 Aligned_cols=39 Identities=18% Similarity=0.226 Sum_probs=24.0
Q ss_pred CCCCeEEEecCCCC-CCcc----HHHHHHHHHhcCCceEEEEecCCC
Q 028146 12 DHKPTIMVTNDDGI-DAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 12 ~~~~~ILlTNDDGi-~s~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
+.+||||+..+.=. ..-| +..|+++| .| |+|.|+++...
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g-~~v~v~~~~~~ 45 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP-ESIVVFASTQN 45 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CG-GGEEEEEECSS
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cC-CeEEEEECCCC
Confidence 46789988876422 2234 44455555 36 79999999764
No 47
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=47.38 E-value=8 Score=37.72 Aligned_cols=35 Identities=17% Similarity=0.116 Sum_probs=31.0
Q ss_pred EEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCC
Q 028146 17 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 17 ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
||++..||.+..-+.+++++|+++| .+|.||+|..
T Consensus 534 IL~a~~dGfe~~E~~~~~~~L~~aG-~~V~vVs~~~ 568 (688)
T 2iuf_A 534 LLASVNKPASIAQGAKLQVALSSVG-VDVVVVAERX 568 (688)
T ss_dssp EECCTTCHHHHHHHHHHHHHHGGGT-CEEEEEESSC
T ss_pred EEecCCCCCcHHHHHHHHHHHHHCC-CEEEEEeccC
Confidence 6666679999999999999999999 6999999953
No 48
>4g41_A MTA/SAH nucleosidase; mixed alpha/beta, hydrolase, S-adenosylhomocysteine, cleavag; HET: MTA; 1.45A {Streptococcus pyogenes}
Probab=47.21 E-value=92 Score=24.86 Aligned_cols=47 Identities=17% Similarity=0.113 Sum_probs=27.5
Q ss_pred HHHHHHHHHcCCCEEEEEeecCC-CCCCCccHHH----HHHHHHHHHHHHHH
Q 028146 126 VAGAREAFFHGVPSVSISYDWVG-GKSNVNDYTL----AAEACLPIINAILA 172 (213)
Q Consensus 126 VgAA~ea~~~GiPaIAvS~~~~~-~~~~~~~~~~----aa~~~~~li~~l~~ 172 (213)
.+-|.-|..+|+|.+.+..-++. +.....+|+. |++.+.+++.++++
T Consensus 181 aa~~~va~~~~~p~~~Ir~ISD~ad~~~~~~~~~~~~~Aa~~~a~~v~~~l~ 232 (236)
T 4g41_A 181 AAIAQAAHTAGKPFIVVRAMSDTAAHDANITFDQFIIEAGKRSAQILMTFLE 232 (236)
T ss_dssp HHHHHHHHHTTCCEEEEEEESSCTTCCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEeCCCCcCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 45555667899999999864321 1222345553 55555566666553
No 49
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=46.65 E-value=53 Score=29.72 Aligned_cols=43 Identities=23% Similarity=0.127 Sum_probs=28.5
Q ss_pred CCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEeec
Q 028146 102 VPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDW 146 (213)
Q Consensus 102 ~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~~ 146 (213)
.-||||.| .|.--.....=.-.+|-|..|..+|+|.||++-..
T Consensus 287 ~ADLVITG--EG~~D~Qtl~GK~p~gVa~~A~~~~vPviaiaG~~ 329 (383)
T 3cwc_A 287 DADLVITG--EGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSL 329 (383)
T ss_dssp HCSEEEEC--CEESCC----CHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred CCCEEEEC--CCCCcCcCCCCcHHHHHHHHHHHhCCCEEEEeCCC
Confidence 68999998 33322222222334688999999999999998643
No 50
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=46.16 E-value=15 Score=27.39 Aligned_cols=84 Identities=15% Similarity=0.173 Sum_probs=51.3
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCCCcCcccccCCCceeeeecccCCceeEEeCCChHHHH
Q 028146 11 SDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCA 90 (213)
Q Consensus 11 ~~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~sit~~~pl~v~~~~~~g~~~~~v~GTPaDcV 90 (213)
..+++||||.-||-.....+ .+.|++.| ++|+- +-.+..+++
T Consensus 5 ~~r~~rILiVdD~~~~~~~l---~~~L~~~G-~~v~~----------------------------------~a~~g~eAl 46 (123)
T 2lpm_A 5 TERRLRVLVVEDESMIAMLI---EDTLCELG-HEVAA----------------------------------TASRMQEAL 46 (123)
T ss_dssp CCCCCCEEEESSSTTTSHHH---HHHHHHHC-CCCCB----------------------------------CSCCHHHHH
T ss_pred CCCCCEEEEEeCCHHHHHHH---HHHHHHCC-CEEEE----------------------------------EECCHHHHH
Confidence 34689999999987665444 44566667 33311 112333333
Q ss_pred HHhhhccCCCCCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEee
Q 028146 91 SLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (213)
Q Consensus 91 ~~al~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~ 145 (213)
.+.- ..+||||++=+|...-.|.++ +.+-...++|.|.+|..
T Consensus 47 ~~~~-----~~~~DlvllDi~mP~~~G~el--------~~~lr~~~ipvI~lTa~ 88 (123)
T 2lpm_A 47 DIAR-----KGQFDIAIIDVNLDGEPSYPV--------ADILAERNVPFIFATGY 88 (123)
T ss_dssp HHHH-----HCCSSEEEECSSSSSCCSHHH--------HHHHHHTCCSSCCBCTT
T ss_pred HHHH-----hCCCCEEEEecCCCCCCHHHH--------HHHHHcCCCCEEEEecC
Confidence 3322 247999999999976656542 22223368999999863
No 51
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=45.80 E-value=15 Score=30.83 Aligned_cols=35 Identities=14% Similarity=0.001 Sum_probs=27.6
Q ss_pred CCeEEEecCCCCCCcc---HHHHHHHHHhcCCceEEEEe
Q 028146 14 KPTIMVTNDDGIDAPG---LRSLVRVLVSTNRYTVQVCA 49 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~G---i~aL~~aL~~~g~~~V~VVA 49 (213)
.|||-|.||++..-.. ...|.+.|++.| |+|+=+.
T Consensus 3 ~MkIaigsDha~~lK~~~i~~~l~~~L~~~G-~eV~D~G 40 (214)
T 3ono_A 3 AMKIALMMENSQAAKNAMVAGELNSVAGGLG-HDVFNVG 40 (214)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHHHHHTT-CEEEECS
T ss_pred ccEEEEECCCcHHHHChhHHHHHHHHHHHCC-CEEEEcC
Confidence 5899999999944444 337899999999 7887665
No 52
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=45.71 E-value=25 Score=27.99 Aligned_cols=38 Identities=21% Similarity=0.288 Sum_probs=31.0
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCC
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
..||++-=-||++..-+...++.|+..| .+|.+++|..
T Consensus 9 ~~~v~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~g 46 (208)
T 3ot1_A 9 SKRILVPVAHGSEEMETVIIVDTLVRAG-FQVTMAAVGD 46 (208)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred CCeEEEEECCCCcHHHHHHHHHHHHHCC-CEEEEEEcCC
Confidence 3455555558999999999999999998 6999999974
No 53
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=45.57 E-value=33 Score=26.87 Aligned_cols=37 Identities=16% Similarity=0.128 Sum_probs=29.5
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCC
Q 028146 16 TIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 16 ~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
||++-=-||++...+...++.|+..| .+|.+++|...
T Consensus 5 ~v~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 41 (197)
T 2rk3_A 5 RALVILAKGAEEMETVIPVDVMRRAG-IKVTVAGLAGK 41 (197)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTT-CEEEEEETTCS
T ss_pred EEEEEECCCCcHHHHHHHHHHHHHCC-CEEEEEEcCCC
Confidence 43333348999999999999999998 69999999764
No 54
>3o4v_A MTA/SAH nucleosidase; mixed alpha/beta dimer, hydrolase; HET: 4CT; 1.75A {Escherichia coli} SCOP: c.56.2.1 PDB: 1jys_A* 1nc1_A* 1nc3_A* 1y6q_A* 1y6r_A* 1z5p_A* 3df9_A* 1z5n_A* 1z5o_A* 4g89_A*
Probab=43.03 E-value=56 Score=26.22 Aligned_cols=50 Identities=14% Similarity=0.125 Sum_probs=30.4
Q ss_pred hHHHHHHHHHcCCCEEEEEeecCC-CCCCCccH----HHHHHHHHHHHHHHHHHH
Q 028146 125 TVAGAREAFFHGVPSVSISYDWVG-GKSNVNDY----TLAAEACLPIINAILAEI 174 (213)
Q Consensus 125 TVgAA~ea~~~GiPaIAvS~~~~~-~~~~~~~~----~~aa~~~~~li~~l~~~~ 174 (213)
+.+-|.-|..+|+|.+++..-++. +.....+| +.|++.+.+++.++++++
T Consensus 177 ~aa~a~va~~~~ip~~~ir~ISD~a~~~~~~~~~~~~~~aa~~~a~~v~~~l~~l 231 (234)
T 3o4v_A 177 ATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKL 231 (234)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEEEecCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455666677799999999864322 11112234 346666677777777654
No 55
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=42.29 E-value=32 Score=26.61 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=32.9
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCC
Q 028146 13 HKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
..++|++-=-||++...+...++.|+..| .+|.+++|...
T Consensus 8 ~~~~v~il~~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 47 (190)
T 2vrn_A 8 TGKKIAILAADGVEEIELTSPRAAIEAAG-GTTELISLEPG 47 (190)
T ss_dssp TTCEEEEECCTTCBHHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHCC-CEEEEEecCCC
Confidence 44666666668999888999999999998 69999999764
No 56
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=41.54 E-value=21 Score=25.25 Aligned_cols=30 Identities=17% Similarity=0.355 Sum_probs=15.0
Q ss_pred cCCCCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 028146 9 VNSDHKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (213)
Q Consensus 9 ~~~~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g 41 (213)
|.+...++|||..||-... ..|.+.|+..|
T Consensus 1 M~~~~~~~ilivdd~~~~~---~~l~~~L~~~g 30 (136)
T 3kto_A 1 MSLNHHPIIYLVDHQKDAR---AALSKLLSPLD 30 (136)
T ss_dssp ------CEEEEECSCHHHH---HHHHHHHTTSS
T ss_pred CCCCCCCeEEEEcCCHHHH---HHHHHHHHHCC
Confidence 4455678999998884332 33445555545
No 57
>3u27_C Microcompartments protein; structural genomics, PSI-biology, MCSG, alpha-beta-alpha FOL bacterial microcompartment, shell protein; 1.85A {Leptotrichia buccalis c-1013-b}
Probab=41.52 E-value=9.6 Score=32.11 Aligned_cols=54 Identities=20% Similarity=0.129 Sum_probs=40.5
Q ss_pred EeCCChHHHHHHhhhccCCCCCCcEE-EecCCCCCcCcccccchhhHHHHHHHHHcC
Q 028146 81 AVSGTPADCASLGVSQALFPSVPDLV-ISGINMGSNCGYHVVYSGTVAGAREAFFHG 136 (213)
Q Consensus 81 ~v~GTPaDcV~~al~~~l~~~~PDLV-vSGIN~G~N~g~dv~ySGTVgAA~ea~~~G 136 (213)
.+.++|+ ...+|.+..+..-..+|+ +..|..|.+.+. ++.+|.|+|-.+|+..+
T Consensus 152 il~~~p~-~ai~aaD~A~KaA~V~l~~~~~p~~~~~~~g-~~itGdvsAV~aAv~a~ 206 (220)
T 3u27_C 152 YLIAPPL-EAMYALDVALKAADVRLVAFYGPPSETNFGG-GLLTGSQSACKAACDAF 206 (220)
T ss_dssp EEEESHH-HHHHHHHHHHHHSSCEEEEEECSCCTTSCEE-EEEESCHHHHHHHHHHH
T ss_pred EEEcCCH-HHHHHHHHHHhhCCeEEEEEEcccCcCcEEE-EEEEEcHHHHHHHHHHH
Confidence 3678998 777777754433568888 577778888877 88999999988887654
No 58
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=41.13 E-value=17 Score=29.79 Aligned_cols=30 Identities=7% Similarity=0.104 Sum_probs=24.8
Q ss_pred CCCCCccHHHHHHHHHhcCCceEEEEecCCC
Q 028146 23 DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 23 DGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
||+.-.-+-..++.|+..| ++|.+++|...
T Consensus 24 ~G~~~~E~~~p~~vl~~ag-~~v~~~s~~g~ 53 (243)
T 1rw7_A 24 TGVFVVEALHPFNTFRKEG-FEVDFVSETGK 53 (243)
T ss_dssp CCBCHHHHHHHHHHHHHTT-CEEEEECSSSC
T ss_pred CccCHHHHHHHHHHHHHCC-CEEEEECCCCC
Confidence 6666667788899999999 69999999764
No 59
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=39.42 E-value=11 Score=26.28 Aligned_cols=30 Identities=27% Similarity=0.385 Sum_probs=15.8
Q ss_pred cCCCCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 028146 9 VNSDHKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (213)
Q Consensus 9 ~~~~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g 41 (213)
|.+.++++|||..||-.... .|.+.|++.|
T Consensus 1 M~~~~~~~ilivdd~~~~~~---~l~~~L~~~g 30 (132)
T 3lte_A 1 MSLKQSKRILVVDDDQAMAA---AIERVLKRDH 30 (132)
T ss_dssp ------CEEEEECSCHHHHH---HHHHHHHHTT
T ss_pred CCCCCCccEEEEECCHHHHH---HHHHHHHHCC
Confidence 55667899999999855433 3445555555
No 60
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=38.34 E-value=38 Score=27.27 Aligned_cols=30 Identities=23% Similarity=0.376 Sum_probs=23.4
Q ss_pred CCeEEEecCCCCCCccH--HHHHHHHHhcCCceEEEEec
Q 028146 14 KPTIMVTNDDGIDAPGL--RSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi--~aL~~aL~~~g~~~V~VVAP 50 (213)
.|+|||| | + |. +.|++.|.+.| ++|+++.-
T Consensus 5 ~~~ilVt---G--a-G~iG~~l~~~L~~~g-~~V~~~~r 36 (286)
T 3ius_A 5 TGTLLSF---G--H-GYTARVLSRALAPQG-WRIIGTSR 36 (286)
T ss_dssp CCEEEEE---T--C-CHHHHHHHHHHGGGT-CEEEEEES
T ss_pred cCcEEEE---C--C-cHHHHHHHHHHHHCC-CEEEEEEc
Confidence 4789999 6 4 54 67888898888 78888864
No 61
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=37.67 E-value=26 Score=25.29 Aligned_cols=38 Identities=18% Similarity=0.183 Sum_probs=23.0
Q ss_pred CCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEee
Q 028146 102 VPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (213)
Q Consensus 102 ~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~ 145 (213)
+||+||..++...-.|.++ -..+......+|.|.+|..
T Consensus 58 ~~dlvi~D~~l~~~~g~~~------~~~l~~~~~~~~ii~~s~~ 95 (153)
T 3hv2_A 58 EVDLVISAAHLPQMDGPTL------LARIHQQYPSTTRILLTGD 95 (153)
T ss_dssp CCSEEEEESCCSSSCHHHH------HHHHHHHCTTSEEEEECCC
T ss_pred CCCEEEEeCCCCcCcHHHH------HHHHHhHCCCCeEEEEECC
Confidence 6899999888765444331 1222223457888888753
No 62
>3bsf_A AT4G34840, nucleosidase; alpha-beta, hydrolase; HET: ADE; 2.90A {Arabidopsis thaliana}
Probab=37.21 E-value=1e+02 Score=25.13 Aligned_cols=52 Identities=15% Similarity=0.063 Sum_probs=30.9
Q ss_pred hHHHHHHHHHcCCCEEEEEeecC--CCCC-CC----ccHHHHHHHHHHHHHHHHHHHHh
Q 028146 125 TVAGAREAFFHGVPSVSISYDWV--GGKS-NV----NDYTLAAEACLPIINAILAEIRN 176 (213)
Q Consensus 125 TVgAA~ea~~~GiPaIAvS~~~~--~~~~-~~----~~~~~aa~~~~~li~~l~~~~~~ 176 (213)
+.+-|.-|..+|+|.+++..-++ ++.. +. ...+.+++.+.+++.++++.+..
T Consensus 190 ~aa~a~va~~~~ip~~~Ir~ISD~a~~~~~s~~~~~~~~~~a~~~~~~~l~~~l~~l~~ 248 (254)
T 3bsf_A 190 GAAVAYVADIFKVPTILIKGVTDIVDGNRPTSEEFLENLAAVTAKLDESLTKVIDFISG 248 (254)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEETTTTCCSTTTTTSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34556667789999999975321 1111 11 22456666667777777765543
No 63
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=35.98 E-value=38 Score=28.13 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=26.0
Q ss_pred CCCCCccHHHHHHHHHhcCCceEEEEecCCCC
Q 028146 23 DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (213)
Q Consensus 23 DGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (213)
||++-.-+-..++.|+++| ++|.+++|...+
T Consensus 37 dG~e~~E~~~p~~vL~~aG-~~V~~~S~~~g~ 67 (242)
T 3l3b_A 37 DGSEIREAVLVMLELDRHN-VNFKCFAPNKNQ 67 (242)
T ss_dssp TSCCHHHHHHHHHHHHHTT-CEEEEEECSSBC
T ss_pred CCeeHHHHHHHHHHHHHCC-CEEEEEecCCCc
Confidence 6777777888899999999 799999997643
No 64
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=35.95 E-value=85 Score=24.14 Aligned_cols=37 Identities=14% Similarity=0.056 Sum_probs=28.6
Q ss_pred eEEEecCCCCCCccHHHHHHHHHh-cCCceEEEEecCCC
Q 028146 16 TIMVTNDDGIDAPGLRSLVRVLVS-TNRYTVQVCAPDSE 53 (213)
Q Consensus 16 ~ILlTNDDGi~s~Gi~aL~~aL~~-~g~~~V~VVAP~~~ 53 (213)
+|++-=-||++-.-+-...+.|+. .| .+|.+++|...
T Consensus 3 ~i~ill~~g~~~~e~~~~~~~l~~a~~-~~v~~vs~~~~ 40 (188)
T 2fex_A 3 RIAIALAQDFADWEPALLAAAARSYLG-VEIVHATPDGM 40 (188)
T ss_dssp EEEEECCTTBCTTSSHHHHHHHHHHSC-CEEEEEETTSS
T ss_pred EEEEEeCCCchHHHHHHHHHHHhhcCC-ceEEEEeCCCC
Confidence 444444578887778888999988 78 69999999764
No 65
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=35.53 E-value=26 Score=32.24 Aligned_cols=39 Identities=21% Similarity=0.348 Sum_probs=28.7
Q ss_pred CCCCCeEEEecCCCCC-C-----cc----HHHHHHHHHhcCCceEEEEecCCC
Q 028146 11 SDHKPTIMVTNDDGID-A-----PG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 11 ~~~~~~ILlTNDDGi~-s-----~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
.-++||||..- .+ + =| ..+|.++|.+.| |||.|+.|.-.
T Consensus 6 ~~~~MkIl~vs---~E~~P~~K~GGLadvv~~L~~aL~~~G-~~V~Vi~P~Y~ 54 (536)
T 3vue_A 6 HHHHMNVVFVG---AEMAPWSKTGGLGDVLGGLPPAMAANG-HRVMVISPRYD 54 (536)
T ss_dssp --CCCEEEEEC---SCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECCS
T ss_pred CCCCcEEEEEE---EeccchhccCcHHHHHHHHHHHHHHcC-CeEEEEecCch
Confidence 34689999873 32 2 23 468999999999 89999999754
No 66
>3gfh_A Ethanolamine utilization protein EUTL; bacterial mircocompartment, shell protein, structural protein; 2.20A {Escherichia coli} PDB: 3mpv_A 3i87_A 3i82_A
Probab=35.21 E-value=4.9 Score=34.04 Aligned_cols=51 Identities=20% Similarity=0.207 Sum_probs=35.0
Q ss_pred EeCCChHHHHHHhhhccCCCCCCcEE-EecCCCCCcCcccccchhhHHHHHHHH
Q 028146 81 AVSGTPADCASLGVSQALFPSVPDLV-ISGINMGSNCGYHVVYSGTVAGAREAF 133 (213)
Q Consensus 81 ~v~GTPaDcV~~al~~~l~~~~PDLV-vSGIN~G~N~g~dv~ySGTVgAA~ea~ 133 (213)
.+.++|+ ...+|.+..+..-..+|+ +..|..|.+.+. ++.+|.|+|..+|+
T Consensus 150 il~~~p~-~aI~aaD~A~KaA~V~l~~~~~p~~g~~~~g-~~itGdvsAV~aAv 201 (225)
T 3gfh_A 150 YLVAPPL-EATYGIDAALKSADVQLATYVPPPSETNYSA-AFLTGSQAACKAAC 201 (225)
T ss_dssp EEEECHH-HHHHHHHHHHHHSCCEEEEEECSCCTTSCEE-EEEESCSSSTTHHH
T ss_pred EEEcCcH-HHHHHHHHHHhhCCeEEEEEEcccCcCcEEE-EEEEEcHHHHHHHH
Confidence 3678888 777777754433467888 667777777776 77788777755554
No 67
>2cve_A Hypothetical protein TTHA1053; COG1739, UPF0029, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: TLA; 1.60A {Thermus thermophilus} SCOP: d.14.1.11 d.58.11.2
Probab=34.40 E-value=29 Score=28.44 Aligned_cols=30 Identities=23% Similarity=0.190 Sum_probs=23.0
Q ss_pred EecCCCCCC--ccHHHHHHHHHhcCCceEEEEe
Q 028146 19 VTNDDGIDA--PGLRSLVRVLVSTNRYTVQVCA 49 (213)
Q Consensus 19 lTNDDGi~s--~Gi~aL~~aL~~~g~~~V~VVA 49 (213)
=.||||-.+ .|...|. .|+..+..+|.||.
T Consensus 59 ~~~DDGEp~GTAG~piL~-~L~~~~l~nv~vVV 90 (191)
T 2cve_A 59 RFSDDGEPSGTAGRPILH-AIEAQGLDRVAVLV 90 (191)
T ss_dssp EEECTTSSTTSSHHHHHH-HHHHTTBCSEEEEE
T ss_pred ccCCCCCcCCcChHHHHH-HHHHcCCCcEEEEE
Confidence 469999988 9987765 57777777887764
No 68
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=34.14 E-value=42 Score=27.80 Aligned_cols=33 Identities=6% Similarity=0.065 Sum_probs=26.7
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCC
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
+|+|||.... --+.+.+++++.| ++|+++.|..
T Consensus 2 ~m~Ililg~g-----~~~~l~~a~~~~G-~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH-----SALQILKGAKDEG-FETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST-----THHHHHHHHHHTT-CCEEEESCGG
T ss_pred ceEEEEECCh-----hHHHHHHHHHhCC-CEEEEEECCC
Confidence 5789999765 4567889999999 7999998864
No 69
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=34.06 E-value=44 Score=32.58 Aligned_cols=38 Identities=16% Similarity=0.013 Sum_probs=29.0
Q ss_pred CeEEEecCCC-CCCccHHHHHHHHHhcCCceEEEEecCCC
Q 028146 15 PTIMVTNDDG-IDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 15 ~~ILlTNDDG-i~s~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
.+|.|-=.|| .+..-+..++++|+++| .+|.||+|...
T Consensus 538 rKVaILvadG~fE~~El~~p~~aL~~aG-a~V~vVsp~~g 576 (688)
T 3ej6_A 538 LRVGVLSTTKGGSLDKAKALKEQLEKDG-LKVTVIAEYLA 576 (688)
T ss_dssp CEEEEECCSSSSHHHHHHHHHHHHHHTT-CEEEEEESSCC
T ss_pred CEEEEEccCCCccHHHHHHHHHHHHHCC-CEEEEEeCCCC
Confidence 4544333466 66668899999999999 79999999764
No 70
>1vi7_A Hypothetical protein YIGZ; structural genomics, unknown function; 2.80A {Escherichia coli} SCOP: d.14.1.11 d.58.11.2
Probab=33.77 E-value=31 Score=28.78 Aligned_cols=30 Identities=23% Similarity=0.231 Sum_probs=23.3
Q ss_pred EecCCCCCC--ccHHHHHHHHHhcCCceEEEEe
Q 028146 19 VTNDDGIDA--PGLRSLVRVLVSTNRYTVQVCA 49 (213)
Q Consensus 19 lTNDDGi~s--~Gi~aL~~aL~~~g~~~V~VVA 49 (213)
=.||||-.+ .|...|. .|+..+..+|.||.
T Consensus 71 ~~sDDGEp~GTAG~piL~-~L~~~~l~nv~vVV 102 (217)
T 1vi7_A 71 GFSDDGEPAGTAGKPMLA-QLMGSGVGEITAVV 102 (217)
T ss_dssp EEECTTSCTTSSSHHHHH-HHHHHTCCSEEEEC
T ss_pred ccCCCCCCCCcchHHHHH-HHHHcCCCCEEEEE
Confidence 369999988 9988765 57777777887774
No 71
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=33.37 E-value=24 Score=27.73 Aligned_cols=43 Identities=16% Similarity=0.284 Sum_probs=32.2
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEEEecCCCCCc
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKSA 56 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~VVAP~~~~Sg 56 (213)
++.+|||. ||.+.+-+ +++..+.|++.|-.+|.++++.....+
T Consensus 97 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 140 (185)
T 2geb_A 97 EGKDVLIV-EDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPER 140 (185)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CCCEEEEE-CCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCCc
Confidence 45688988 99998744 778889999888667778777644433
No 72
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=33.24 E-value=1.1e+02 Score=24.28 Aligned_cols=37 Identities=11% Similarity=0.016 Sum_probs=29.4
Q ss_pred eEEEecCCCCCCccHHHHHHHHH--------hcCCceEEEEecCCC
Q 028146 16 TIMVTNDDGIDAPGLRSLVRVLV--------STNRYTVQVCAPDSE 53 (213)
Q Consensus 16 ~ILlTNDDGi~s~Gi~aL~~aL~--------~~g~~~V~VVAP~~~ 53 (213)
+|++-=-||++.--+...++.|+ +.+ .+|.+++|..+
T Consensus 7 ~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~-~~v~~vs~~~~ 51 (212)
T 3efe_A 7 KAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAP-LKVITVGANKE 51 (212)
T ss_dssp CEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCC-CCEEEEESSSC
T ss_pred EEEEEECCCccHHHHHHHHHHHHhhhccccCCCC-eEEEEEECCCC
Confidence 45555567899889999999998 566 69999999754
No 73
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=33.13 E-value=24 Score=30.30 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=23.4
Q ss_pred CCCCeEEEecCC----CCCCccHHHHHHHHHhcCCceEEEE
Q 028146 12 DHKPTIMVTNDD----GIDAPGLRSLVRVLVSTNRYTVQVC 48 (213)
Q Consensus 12 ~~~~~ILlTNDD----Gi~s~Gi~aL~~aL~~~g~~~V~VV 48 (213)
.+.|||||-|=. +..+.=..+..+.|++.| |+|.++
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G-~eV~v~ 59 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAG-HEVQVS 59 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTT-CEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCC-CeEEEE
Confidence 478999999743 222222456677888888 799887
No 74
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=32.94 E-value=43 Score=26.75 Aligned_cols=25 Identities=24% Similarity=0.195 Sum_probs=18.8
Q ss_pred hhhHHHHHHHHHcCCCEEEEEeecC
Q 028146 123 SGTVAGAREAFFHGVPSVSISYDWV 147 (213)
Q Consensus 123 SGTVgAA~ea~~~GiPaIAvS~~~~ 147 (213)
.||=+..+..+..|||++.++....
T Consensus 295 ggTDa~~~~~~~~Giptv~~G~g~~ 319 (354)
T 2wzn_A 295 TGTDANVMQINKEGVATAVLSIPIR 319 (354)
T ss_dssp CSSHHHHHHTSTTCCEEEEEEEEEB
T ss_pred cccHHHHHHHhcCCCCEEEECcccC
Confidence 4666666666678999999998654
No 75
>3eei_A 5-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN; HET: MTM; 1.78A {Neisseria meningitidis serogroup B} SCOP: c.56.2.1
Probab=32.90 E-value=83 Score=25.14 Aligned_cols=48 Identities=17% Similarity=0.072 Sum_probs=27.9
Q ss_pred hHHHHHHHHHcCCCEEEEEeecCC-CCCCCccHH----HHHHHHHHHHHHHHH
Q 028146 125 TVAGAREAFFHGVPSVSISYDWVG-GKSNVNDYT----LAAEACLPIINAILA 172 (213)
Q Consensus 125 TVgAA~ea~~~GiPaIAvS~~~~~-~~~~~~~~~----~aa~~~~~li~~l~~ 172 (213)
+.+-|.-|..+|+|.+++..-++. +.....+|+ .|++.+.+++.++++
T Consensus 179 ~aa~a~~a~~~gip~~~ir~IsD~a~~~~~~~~~~~~~~aa~~~~~~v~~~l~ 231 (233)
T 3eei_A 179 AAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTAAANSAKMVAEIVK 231 (233)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEecCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 455666677899999999864321 111223344 355555566666554
No 76
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=32.71 E-value=37 Score=27.60 Aligned_cols=39 Identities=18% Similarity=0.267 Sum_probs=29.8
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEEEecCC
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
++.+|||. ||.+.+-+ ++++.+.|++.|-.+|.++++-.
T Consensus 125 ~gk~VliV-DDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~ 164 (217)
T 1z7g_A 125 TGKNVLIV-EDIIDTGKTMQTLLSLVRQYNPKMVKVASLLV 164 (217)
T ss_dssp TTSEEEEE-EEECCCHHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred CCCEEEEE-eceeCcHHHHHHHHHHHHhcCCCEEEEEEEEE
Confidence 45678888 99999744 78888999988866777777644
No 77
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=32.47 E-value=19 Score=29.97 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=26.7
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCC-ceEEEEecC
Q 028146 11 SDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNR-YTVQVCAPD 51 (213)
Q Consensus 11 ~~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~-~~V~VVAP~ 51 (213)
|..+||||+.....-+.-++..|.++|++.+. ++|.++...
T Consensus 5 m~~~mkIl~v~~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~ 46 (375)
T 3beo_A 5 MTERLKVMTIFGTRPEAIKMAPLVLELQKHPEKIESIVTVTA 46 (375)
T ss_dssp CSSCEEEEEEECSHHHHHHHHHHHHHHTTCTTTEEEEEEECC
T ss_pred CCcCceEEEEecCcHHHHHHHHHHHHHHhCCCCCCeEEEEcC
Confidence 34568999986443233466788889987632 678777653
No 78
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=32.02 E-value=22 Score=28.07 Aligned_cols=36 Identities=11% Similarity=0.162 Sum_probs=28.3
Q ss_pred EEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCC
Q 028146 17 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 17 ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
|+|-=.||++..=+..-++.|++.| ++|.+++|...
T Consensus 11 v~il~~~gFe~~E~~~p~~~l~~ag-~~V~~~s~~~~ 46 (177)
T 4hcj_A 11 LYVMSGQNFQDEEYFESKKIFESAG-YKTKVSSTFIG 46 (177)
T ss_dssp EEECCSEEECHHHHHHHHHHHHHTT-CEEEEEESSSE
T ss_pred EEEECCCCccHHHHHHHHHHHHHCC-CEEEEEECCCC
Confidence 4444567888777888899999999 79999998653
No 79
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=32.00 E-value=63 Score=25.48 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=29.6
Q ss_pred eEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCC
Q 028146 16 TIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 16 ~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
+|++-=-||.+...+...++.|+..| .+|.+++|...
T Consensus 4 kV~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 40 (205)
T 2ab0_A 4 SALVCLAPGSEETEAVTTIDLLVRGG-IKVTTASVASD 40 (205)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTT-CEEEEEECSST
T ss_pred EEEEEEcCCCcHHHHHHHHHHHHHCC-CEEEEEeCCCC
Confidence 44433347898888999999999998 69999999765
No 80
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=31.40 E-value=34 Score=26.65 Aligned_cols=39 Identities=21% Similarity=0.280 Sum_probs=30.0
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEEEecCC
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
++.+|||. ||.+.+-+ ++++.+.|++.|-..|.+++.-.
T Consensus 94 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~ 133 (183)
T 1hgx_A 94 EGRHVLVV-EDIIDTGLTMYQLLNNLQMRKPASLKVCTLCD 133 (183)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred CCCEEEEE-CCccCCHHHHHHHHHHHHhcCCCEEEEEEEEe
Confidence 45678888 99998744 77888999988866777777644
No 81
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=31.39 E-value=38 Score=29.17 Aligned_cols=34 Identities=3% Similarity=-0.072 Sum_probs=25.3
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEec
Q 028146 12 DHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP 50 (213)
+..++|||.|-.++ + ..+.+++++.| ++|+++.+
T Consensus 5 ~~~~~ilI~g~g~~---~-~~~~~a~~~~G-~~~v~v~~ 38 (403)
T 4dim_A 5 YDNKRLLILGAGRG---Q-LGLYKAAKELG-IHTIAGTM 38 (403)
T ss_dssp -CCCEEEEECCCGG---G-HHHHHHHHHHT-CEEEEEEC
T ss_pred cCCCEEEEECCcHh---H-HHHHHHHHHCC-CEEEEEcC
Confidence 46789999998864 3 34778888899 68888753
No 82
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=30.81 E-value=34 Score=27.89 Aligned_cols=39 Identities=8% Similarity=0.187 Sum_probs=30.2
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEEEecCC
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
++.+|||. ||.+.+-+ ++++.+.|++.|-.+|.++++..
T Consensus 133 ~Gk~VllV-DDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~ 172 (225)
T 2jbh_A 133 AGKNVLIV-EDVVGTGRTMKALLSNIEKYKPNMIKVASLLV 172 (225)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred CCCEEEEE-ccccCcHHHHHHHHHHHHhcCCCEEEEEEEEE
Confidence 45688888 99998744 77888999988866777777744
No 83
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=30.77 E-value=52 Score=29.62 Aligned_cols=41 Identities=17% Similarity=0.276 Sum_probs=28.0
Q ss_pred cCCCCCCeEEEecCCCCCCcc----HHHHHHHHHhc-CCceEEEEecCCC
Q 028146 9 VNSDHKPTIMVTNDDGIDAPG----LRSLVRVLVST-NRYTVQVCAPDSE 53 (213)
Q Consensus 9 ~~~~~~~~ILlTNDDGi~s~G----i~aL~~aL~~~-g~~~V~VVAP~~~ 53 (213)
|...++++||+.- +.+.| +..|++.|.+. | |+|+++.+..+
T Consensus 1 M~~~~~~~vl~~p---~p~~GHv~P~l~La~~L~~r~G-h~Vt~~t~~~~ 46 (480)
T 2vch_A 1 MEESKTPHVAIIP---SPGMGHLIPLVEFAKRLVHLHG-LTVTFVIAGEG 46 (480)
T ss_dssp -----CCEEEEEC---CSCHHHHHHHHHHHHHHHHHHC-CEEEEEECCSS
T ss_pred CCCCCCcEEEEec---CcchhHHHHHHHHHHHHHhCCC-CEEEEEECCCc
Confidence 4445667888773 44544 78899999987 9 89999998764
No 84
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=30.59 E-value=28 Score=27.80 Aligned_cols=42 Identities=17% Similarity=0.296 Sum_probs=31.9
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEEEecCCCCC
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKS 55 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~VVAP~~~~S 55 (213)
++.+|||. ||.+.+-+ +++..+.|++.|-.+|.++++.....
T Consensus 117 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 159 (205)
T 1yfz_A 117 EGKDVLIV-EDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 159 (205)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred CcCEEEEE-CCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 45689998 99998744 77888999988866787877764443
No 85
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=30.57 E-value=36 Score=27.52 Aligned_cols=42 Identities=19% Similarity=0.296 Sum_probs=31.9
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEEEecCCCCC
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKS 55 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~VVAP~~~~S 55 (213)
++.+|||. ||.+.+-+ ++++.+.|++.|-.+|.++++..-.+
T Consensus 117 ~gk~VllV-DDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~ 159 (211)
T 1pzm_A 117 ENRHIMLV-EDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPS 159 (211)
T ss_dssp TTCEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred CCCEEEEE-CCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 45688888 99998744 78899999988866787877754433
No 86
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=30.26 E-value=96 Score=25.09 Aligned_cols=36 Identities=3% Similarity=0.030 Sum_probs=25.7
Q ss_pred CCCCeEEEecCCCCC-CccH-HHHHHHHHhcCCceEEEEecC
Q 028146 12 DHKPTIMVTNDDGID-APGL-RSLVRVLVSTNRYTVQVCAPD 51 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~-s~Gi-~aL~~aL~~~g~~~V~VVAP~ 51 (213)
.+..++|||= -. +-|| +++++.|.+.| ++|+++.-.
T Consensus 4 l~~k~vlVTG---as~~~gIG~~~a~~l~~~G-~~V~~~~r~ 41 (275)
T 2pd4_A 4 LKGKKGLIVG---VANNKSIAYGIAQSCFNQG-ATLAFTYLN 41 (275)
T ss_dssp TTTCEEEEEC---CCSTTSHHHHHHHHHHTTT-CEEEEEESS
T ss_pred CCCCEEEEEC---CCCCCcHHHHHHHHHHHCC-CEEEEEeCC
Confidence 3556799993 32 1355 68899999889 789888654
No 87
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=30.25 E-value=1.9e+02 Score=28.40 Aligned_cols=32 Identities=31% Similarity=0.344 Sum_probs=20.8
Q ss_pred CCCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEE
Q 028146 100 PSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSI 142 (213)
Q Consensus 100 ~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAv 142 (213)
..+||+|.+ | ...+|-+ |++-+-.+|+|-+..
T Consensus 405 ~~~PDVIHs--H--------~~~sglv-a~llar~~gvP~V~T 436 (816)
T 3s28_A 405 NGKPDLIIG--N--------YSDGNLV-ASLLAHKLGVTQCTI 436 (816)
T ss_dssp SSCCSEEEE--E--------HHHHHHH-HHHHHHHHTCCEEEE
T ss_pred CCCCeEEEe--C--------CchHHHH-HHHHHHHcCCCEEEE
Confidence 458999974 1 1234543 556677789998754
No 88
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=30.24 E-value=38 Score=29.62 Aligned_cols=40 Identities=13% Similarity=0.216 Sum_probs=32.3
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCC
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (213)
++||++-==||++..-+...++.|++.| ++|.+++|+.++
T Consensus 205 ~~ki~ill~dg~~~~e~~~~~~~l~~ag-~~v~~vs~~~~~ 244 (396)
T 3uk7_A 205 NKRILFLCGDYMEDYEVKVPFQSLQALG-CQVDAVCPEKKA 244 (396)
T ss_dssp CCEEEEECCTTEEHHHHHHHHHHHHHHT-CEEEEECTTCCT
T ss_pred cceEEEEecCCCcchhHHHHHHHHHHCC-CEEEEECCCCCC
Confidence 3455555558999888999999999999 799999998654
No 89
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=30.19 E-value=33 Score=28.14 Aligned_cols=42 Identities=10% Similarity=0.188 Sum_probs=31.9
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEEEecCCCCC
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKS 55 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~VVAP~~~~S 55 (213)
++.+|||. ||.+.+-+ ++++.+.|++.|-.+|.++++..-.+
T Consensus 102 ~Gk~VLLV-DDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~ 144 (220)
T 1tc1_A 102 EGHHVLIV-EDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKRE 144 (220)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTT
T ss_pred CCCEEEEE-eCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 45688888 99998743 78899999988866788887754433
No 90
>3dp9_A MTA/SAH nucleosidase; vibrio cholerae 5'-methylthioadenosine/S-adenosyl homocystei nucleosidase, butylthio dadme immucillin A, MTAN, hydrolase; HET: BIG; 2.30A {Vibrio cholerae} SCOP: c.56.2.1
Probab=29.57 E-value=76 Score=25.34 Aligned_cols=48 Identities=19% Similarity=0.122 Sum_probs=28.5
Q ss_pred hHHHHHHHHHcCCCEEEEEeecCCC-CCCCccHH----HHHHHHHHHHHHHHH
Q 028146 125 TVAGAREAFFHGVPSVSISYDWVGG-KSNVNDYT----LAAEACLPIINAILA 172 (213)
Q Consensus 125 TVgAA~ea~~~GiPaIAvS~~~~~~-~~~~~~~~----~aa~~~~~li~~l~~ 172 (213)
+.+-|.-|..+|+|.+++..-++.. .....+|+ .|++.+.+++.++++
T Consensus 176 ~aa~a~~a~~~~ip~~~ir~ISD~a~~~~~~~~~~~~~~aa~~~a~~v~~~l~ 228 (231)
T 3dp9_A 176 ASAIAQTCHQFKVPFVVVRAISDVADKESPLSFEEFLPLAAKSSSAMVLKMVE 228 (231)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEecCCCCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666777899999998643221 11122344 456666666666654
No 91
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=29.30 E-value=56 Score=26.38 Aligned_cols=30 Identities=17% Similarity=0.204 Sum_probs=26.2
Q ss_pred CCCCCccHHHHHHHHHhcCCceEEEEecCCC
Q 028146 23 DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 23 DGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
||+.-.-+-..++.|+..| .+|.+++|..+
T Consensus 20 ~g~~~~E~~~p~~~l~~ag-~~v~~~s~~g~ 49 (232)
T 1vhq_A 20 DGSEIHEAVLTLLAISRSG-AQAVCFAPDKQ 49 (232)
T ss_dssp TSBCHHHHHHHHHHHHHTT-CEEEEEECSSB
T ss_pred CCeeHHHHHHHHHHHHHCC-CEEEEEecCCC
Confidence 6888888888999999998 69999999764
No 92
>1to6_A Glycerate kinase; glycerate metabolism, structural genomics T831, PSI, protein structure initiative; 2.50A {Neisseria meningitidis serogroup A} SCOP: c.141.1.1
Probab=29.10 E-value=1.2e+02 Score=27.14 Aligned_cols=43 Identities=30% Similarity=0.287 Sum_probs=28.2
Q ss_pred CCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEeec
Q 028146 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDW 146 (213)
Q Consensus 101 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~~ 146 (213)
..-||||.| .|.--.....=.-.+|-|..|.. |+|.||++-..
T Consensus 277 ~~ADLVITG--EG~~D~QT~~GK~p~gVa~~A~~-~~PviaiaG~~ 319 (371)
T 1to6_A 277 SDVDLVIVG--EGRLDRQSLAGKAPIGVAKRTPV-GVPVVAICGSL 319 (371)
T ss_dssp TTCSEEEEC--CSEECSTTTTTCHHHHHHTTSCT-TCCEEEEESEE
T ss_pred cCCCEEEEC--CCCCCCCCCCCcHHHHHHHHHhc-CCCEEEEeCCC
Confidence 478999998 33322222222334577888877 99999998643
No 93
>2xd7_A Core histone macro-H2A.2; chromosomal protein, nucleosome core, chromatin regulator, nucleus, DNA-binding protein, phosphoprotein; 2.09A {Homo sapiens}
Probab=29.09 E-value=1.5e+02 Score=23.63 Aligned_cols=68 Identities=21% Similarity=0.048 Sum_probs=44.8
Q ss_pred CcEEEe--cCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCccHHHHHHHHHHHHHHHHH
Q 028146 103 PDLVIS--GINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILA 172 (213)
Q Consensus 103 PDLVvS--GIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~ 172 (213)
...||- ||..+.+...+.+++..-.+-..|..+|+.+|||-.=. .+. --.+++.+++.+.+-+.++++
T Consensus 94 ~k~VIH~vgP~~~~~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~Is-tG~-~g~p~~~aa~i~~~~v~~~l~ 163 (193)
T 2xd7_A 94 AKFVIHCHIPQWGSDKCEEQLEETIKNCLSAAEDKKLKSVAFPPFP-SGR-NCFPKQTAAQVTLKAISAHFD 163 (193)
T ss_dssp SSEEEEEECCCTTSTTHHHHHHHHHHHHHHHHHHTTCSEEEECCCC-CST-TCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcCCCcchHHHHHHHHHHHHHHHHHcCCCEEEecccc-CCC-CCCCHHHHHHHHHHHHHHHHH
Confidence 345544 77776553345677877676667778999999996421 111 235688888888777766654
No 94
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=29.04 E-value=83 Score=25.65 Aligned_cols=35 Identities=6% Similarity=0.134 Sum_probs=25.4
Q ss_pred CCCCeEEEecCCCCCC-ccH-HHHHHHHHhcCCceEEEEec
Q 028146 12 DHKPTIMVTNDDGIDA-PGL-RSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~s-~Gi-~aL~~aL~~~g~~~V~VVAP 50 (213)
.++.++||| |-.+ -|| +++++.|.+.| ++|+++.-
T Consensus 19 l~~k~vlVT---Gas~~~gIG~~ia~~l~~~G-~~V~~~~r 55 (285)
T 2p91_A 19 LEGKRALIT---GVANERSIAYGIAKSFHREG-AQLAFTYA 55 (285)
T ss_dssp TTTCEEEEC---CCSSTTSHHHHHHHHHHHTT-CEEEEEES
T ss_pred cCCCEEEEE---CCCCCCcHHHHHHHHHHHcC-CEEEEEeC
Confidence 345679999 3331 466 78899999889 78888764
No 95
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=29.04 E-value=55 Score=24.16 Aligned_cols=34 Identities=18% Similarity=0.110 Sum_probs=25.9
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecC
Q 028146 13 HKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPD 51 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (213)
.+.+|+|. |...-| +.+++.|.+.| ++|+++.++
T Consensus 2 ~~~~vlI~---G~G~vG-~~la~~L~~~g-~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVC---GHSILA-INTILQLNQRG-QNVTVISNL 35 (153)
T ss_dssp CCSCEEEE---CCSHHH-HHHHHHHHHTT-CCEEEEECC
T ss_pred CCCcEEEE---CCCHHH-HHHHHHHHHCC-CCEEEEECC
Confidence 35578888 766566 56788888888 799999875
No 96
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=28.59 E-value=63 Score=27.39 Aligned_cols=44 Identities=23% Similarity=0.218 Sum_probs=37.9
Q ss_pred CCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEee
Q 028146 102 VPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (213)
Q Consensus 102 ~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~ 145 (213)
+.|.|+.|-+.=.--|.-+...||..-|+.|..+|+|-+.++-.
T Consensus 177 ~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V~a~~ 220 (276)
T 1vb5_A 177 EASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAET 220 (276)
T ss_dssp TCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCG
T ss_pred cCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEEeccc
Confidence 79999999887766666666799999999999999999998743
No 97
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=28.31 E-value=86 Score=24.43 Aligned_cols=33 Identities=24% Similarity=0.421 Sum_probs=24.4
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEec
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP 50 (213)
+|+|+|. |.| ..+...+.++|++.| .++.++-+
T Consensus 2 ~~~I~ii-d~~--~~~~~~~~~~l~~~G-~~~~~~~~ 34 (200)
T 1ka9_H 2 RMKALLI-DYG--SGNLRSAAKALEAAG-FSVAVAQD 34 (200)
T ss_dssp -CEEEEE-CSS--CSCHHHHHHHHHHTT-CEEEEESS
T ss_pred ccEEEEE-eCC--CccHHHHHHHHHHCC-CeEEEecC
Confidence 3789988 555 346677899999998 68887754
No 98
>2lw6_A Avrpiz-T protein; plant resistance gene, avirulence protein, protein degradation, apoptosis; NMR {Magnaporthe oryzae}
Probab=27.91 E-value=9.1 Score=26.36 Aligned_cols=35 Identities=26% Similarity=0.457 Sum_probs=20.9
Q ss_pred EEeCCChHHHHHHhhhccCCCCCCcEEEecCCCCCcC--cccccchhhHH
Q 028146 80 YAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNC--GYHVVYSGTVA 127 (213)
Q Consensus 80 ~~v~GTPaDcV~~al~~~l~~~~PDLVvSGIN~G~N~--g~dv~ySGTVg 127 (213)
..-+.+|+-|-.+-... .-.|... .+|++.|||||
T Consensus 43 icknaspvhcnylkctn-------------laagfsagtstdvlssgtvg 79 (80)
T 2lw6_A 43 ICKNASPVHCNYLKCTN-------------LAAGFSAGTSTDVLSSGTVG 79 (80)
T ss_dssp EEEESCSSSCCCEEEES-------------CBTTBEECCCCTTTTCSCSC
T ss_pred hhcCCCccccceeeecc-------------hhhhccCCcccceecccccC
Confidence 34578888874333321 1233333 46899999997
No 99
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=27.78 E-value=39 Score=27.93 Aligned_cols=35 Identities=11% Similarity=0.023 Sum_probs=28.2
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCCceEEE
Q 028146 12 DHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQV 47 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~V 47 (213)
..+..|.||=|||+.+.+...+.+.|++.|. ..+.
T Consensus 23 ~~~k~VaLTFDDG~~~~~t~~il~iL~~~~v-~ATF 57 (254)
T 2vyo_A 23 TNSGMIAINFVDGPVRGVTDRILNTLDELGV-KATF 57 (254)
T ss_dssp SSSSEEEEEEESCCCTTHHHHHHHHHHHHTC-CCEE
T ss_pred CCCCEEEEEEeCCCCcccHHHHHHHHHHcCC-CEEE
Confidence 3456699999999998888899999998874 4444
No 100
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=27.61 E-value=2e+02 Score=21.88 Aligned_cols=104 Identities=20% Similarity=0.189 Sum_probs=57.5
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCCCcCcccccCCCceeeeecccCCceeEEeCCCh-HHHHHHh
Q 028146 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTP-ADCASLG 93 (213)
Q Consensus 15 ~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~sit~~~pl~v~~~~~~g~~~~~v~GTP-aDcV~~a 93 (213)
|+||||==-|. -| ++|++.|.+.| ++|+++.-..++-. . . . +...+.+|=+= .+.+.-+
T Consensus 1 M~ilItGatG~--iG-~~l~~~L~~~g-~~V~~~~R~~~~~~--~---~-~----------~~~~~~~D~~d~~~~~~~~ 60 (219)
T 3dqp_A 1 MKIFIVGSTGR--VG-KSLLKSLSTTD-YQIYAGARKVEQVP--Q---Y-N----------NVKAVHFDVDWTPEEMAKQ 60 (219)
T ss_dssp CEEEEESTTSH--HH-HHHHHHHTTSS-CEEEEEESSGGGSC--C---C-T----------TEEEEECCTTSCHHHHHTT
T ss_pred CeEEEECCCCH--HH-HHHHHHHHHCC-CEEEEEECCccchh--h---c-C----------CceEEEecccCCHHHHHHH
Confidence 57899832222 23 67788888888 78888864322110 0 0 1 12223333322 3333333
Q ss_pred hhccCCCCCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEE-EEe
Q 028146 94 VSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVS-ISY 144 (213)
Q Consensus 94 l~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIA-vS~ 144 (213)
+ . ++|.||.-.-....--.++.+.||.-.+..+...|++-|- +|.
T Consensus 61 ~-----~-~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 61 L-----H-GMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp T-----T-TCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred H-----c-CCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 3 2 6899996444333333456788888776666667886544 454
No 101
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=27.28 E-value=39 Score=25.25 Aligned_cols=32 Identities=13% Similarity=0.225 Sum_probs=23.8
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceE
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTV 45 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V 45 (213)
++.+|||. ||.+.+-+ +.+..+.|++.|...|
T Consensus 82 ~gk~VllV-DDvitTG~Tl~~a~~~L~~~ga~~v 114 (153)
T 1vdm_A 82 KDKRVVIV-DDVSDTGKTLEVVIEEVKKLGAKEI 114 (153)
T ss_dssp BTCEEEEE-EEEESSCHHHHHHHHHHHTTTBSEE
T ss_pred CCCEEEEE-ecccCChHHHHHHHHHHHHcCCCEE
Confidence 45678888 99888643 6788899998884445
No 102
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=27.08 E-value=98 Score=24.83 Aligned_cols=35 Identities=11% Similarity=0.178 Sum_probs=24.9
Q ss_pred CCCCeEEEecCCCCCC-ccH-HHHHHHHHhcCCceEEEEec
Q 028146 12 DHKPTIMVTNDDGIDA-PGL-RSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~s-~Gi-~aL~~aL~~~g~~~V~VVAP 50 (213)
.+..++||| |-.+ -|| +++++.|.+.| ++|+++.-
T Consensus 7 l~~k~vlVT---Gas~~~gIG~~ia~~l~~~G-~~V~~~~r 43 (265)
T 1qsg_A 7 LSGKRILVT---GVASKLSIAYGIAQAMHREG-AELAFTYQ 43 (265)
T ss_dssp TTTCEEEEC---CCCSTTSHHHHHHHHHHHTT-CEEEEEES
T ss_pred cCCCEEEEE---CCCCCCCHHHHHHHHHHHCC-CEEEEEcC
Confidence 345679999 3321 455 67899999899 78888764
No 103
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=26.96 E-value=1e+02 Score=24.91 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=25.6
Q ss_pred CCCCeEEEecCCCC-CCccH-HHHHHHHHhcCCceEEEEec
Q 028146 12 DHKPTIMVTNDDGI-DAPGL-RSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 12 ~~~~~ILlTNDDGi-~s~Gi-~aL~~aL~~~g~~~V~VVAP 50 (213)
.+...+||| |= .+-|| +++++.|.+.| ++|+++.-
T Consensus 5 l~~k~vlVT---Ga~~s~gIG~aia~~l~~~G-~~V~~~~r 41 (269)
T 2h7i_A 5 LDGKRILVS---GIITDSSIAFHIARVAQEQG-AQLVLTGF 41 (269)
T ss_dssp TTTCEEEEC---CCSSTTSHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cCCCEEEEE---CCCCCCchHHHHHHHHHHCC-CEEEEEec
Confidence 355679999 33 14566 78899999999 78888764
No 104
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=26.94 E-value=54 Score=24.85 Aligned_cols=32 Identities=22% Similarity=0.117 Sum_probs=22.5
Q ss_pred CeEEEecCCCCCCcc--HHHHHHHHHhcCCceEEEEe
Q 028146 15 PTIMVTNDDGIDAPG--LRSLVRVLVSTNRYTVQVCA 49 (213)
Q Consensus 15 ~~ILlTNDDGi~s~G--i~aL~~aL~~~g~~~V~VVA 49 (213)
.-|||| ||....+ +...++.|++.| -.|++|+
T Consensus 125 ~iillT--DG~~~~~~~~~~~~~~l~~~g-i~v~~ig 158 (178)
T 2xgg_A 125 LVIGMT--DGESDSDFRTVRAAKEIRELG-GIVTVLA 158 (178)
T ss_dssp EEEEEE--SSCCCHHHHHSHHHHHHHHTT-CEEEEEE
T ss_pred EEEEEc--CCCCCCCccHHHHHHHHHHCC-CEEEEEE
Confidence 336676 5777766 777888888877 3676664
No 105
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=26.94 E-value=68 Score=28.66 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=27.2
Q ss_pred CCCCcEEEecCCCCCcCcccccchhhH-HHHHHHHHcCCCEEEEEee
Q 028146 100 PSVPDLVISGINMGSNCGYHVVYSGTV-AGAREAFFHGVPSVSISYD 145 (213)
Q Consensus 100 ~~~PDLVvSGIN~G~N~g~dv~ySGTV-gAA~ea~~~GiPaIAvS~~ 145 (213)
..++||||+ +|-| ||+ .||+...-.++|.++|.++
T Consensus 106 ~~~~DlvI~-------lGGD----GT~L~aa~~~~~~~~PvlGiN~G 141 (365)
T 3pfn_A 106 SNQIDFIIC-------LGGD----GTLLYASSLFQGSVPPVMAFHLG 141 (365)
T ss_dssp TTTCSEEEE-------ESST----THHHHHHHHCSSSCCCEEEEESS
T ss_pred ccCCCEEEE-------EcCh----HHHHHHHHHhccCCCCEEEEcCC
Confidence 457899987 6666 998 6666665678999999875
No 106
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=26.87 E-value=45 Score=27.41 Aligned_cols=42 Identities=10% Similarity=0.199 Sum_probs=31.1
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEEEecCCCCC
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKS 55 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~VVAP~~~~S 55 (213)
++.++||. ||.+.+-+ ++++.+.|++.|-..|.++++..-++
T Consensus 141 ~Gk~VLIV-DDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~ 183 (233)
T 1fsg_A 141 RDKHVLIV-EDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRT 183 (233)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCEEEEE-ccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 45688888 99998744 78889999988855677777654333
No 107
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=26.33 E-value=47 Score=26.88 Aligned_cols=42 Identities=14% Similarity=-0.009 Sum_probs=36.8
Q ss_pred CcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEe
Q 028146 103 PDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY 144 (213)
Q Consensus 103 PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~ 144 (213)
.|.||.|-..=.--|.-+.-.||...|+-|-.+|||-+.++-
T Consensus 52 Vd~VivGAd~v~~nG~v~nkiGT~~~Al~Ak~~~vPf~V~a~ 93 (191)
T 1w2w_B 52 IKAAFVGADRIVRNGDTANKIGTLQLAVICKQFGIKFFVVAP 93 (191)
T ss_dssp EEEEEECCSEECTTSCEEEETTHHHHHHHHHHHTCEEEEECC
T ss_pred CCEEEECccEEecCCCEEecccHHHHHHHHHHcCCCEEEecc
Confidence 899999987766667777889999999999999999999864
No 108
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=26.28 E-value=59 Score=32.00 Aligned_cols=38 Identities=8% Similarity=0.184 Sum_probs=31.4
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCC
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
..+|+|-=.||++..-+..++++|+++| .+|.+|+|..
T Consensus 600 grKVaILlaDGfEe~El~~pvdaLr~AG-~~V~vVS~~~ 637 (753)
T 3ttv_A 600 GRVVAILLNDEVRSADLLAILKALKAKG-VHAKLLYSRM 637 (753)
T ss_dssp TCEEEEECCTTCCHHHHHHHHHHHHHHT-CEEEEEESSS
T ss_pred CCEEEEEecCCCCHHHHHHHHHHHHHCC-CEEEEEEcCC
Confidence 3565555457999999999999999999 6999999965
No 109
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=26.23 E-value=66 Score=22.45 Aligned_cols=26 Identities=23% Similarity=0.405 Sum_probs=15.3
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 028146 13 HKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g 41 (213)
..++|||..||-.. ...|.+.|...|
T Consensus 3 ~~~~iLivdd~~~~---~~~l~~~L~~~g 28 (142)
T 2qxy_A 3 LTPTVMVVDESRIT---FLAVKNALEKDG 28 (142)
T ss_dssp CCCEEEEECSCHHH---HHHHHHHHGGGT
T ss_pred CCCeEEEEeCCHHH---HHHHHHHHHhCC
Confidence 46789999888322 233444555444
No 110
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=25.97 E-value=71 Score=22.23 Aligned_cols=39 Identities=18% Similarity=0.214 Sum_probs=23.2
Q ss_pred CCCcEEEecCCCCCcCcccccchhhHHHHHHH--HHcCCCEEEEEee
Q 028146 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREA--FFHGVPSVSISYD 145 (213)
Q Consensus 101 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea--~~~GiPaIAvS~~ 145 (213)
.+||+||..++.....|.+ +-..+.. ....+|.|.+|..
T Consensus 50 ~~~dlii~d~~l~~~~g~~------~~~~l~~~~~~~~~pii~~s~~ 90 (142)
T 3cg4_A 50 GFSGVVLLDIMMPGMDGWD------TIRAILDNSLEQGIAIVMLTAK 90 (142)
T ss_dssp CCCEEEEEESCCSSSCHHH------HHHHHHHTTCCTTEEEEEEECT
T ss_pred cCCCEEEEeCCCCCCCHHH------HHHHHHhhcccCCCCEEEEECC
Confidence 3699999998875433322 1112222 2356899999864
No 111
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=25.87 E-value=68 Score=28.67 Aligned_cols=38 Identities=16% Similarity=0.372 Sum_probs=28.6
Q ss_pred CCCCeEEEecCCCCCCcc----HHHHHHHHHhcCCceEEEEecCCC
Q 028146 12 DHKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~s~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
+++++||+.. +.+.| +..|++.|.+.| |+|+++.+...
T Consensus 6 ~~~~~vl~~p---~p~~GHi~P~l~La~~L~~rG-~~VT~v~t~~~ 47 (482)
T 2pq6_A 6 NRKPHVVMIP---YPVQGHINPLFKLAKLLHLRG-FHITFVNTEYN 47 (482)
T ss_dssp --CCEEEEEC---CSSHHHHHHHHHHHHHHHHTT-CEEEEEEEHHH
T ss_pred CCCCEEEEec---CccchhHHHHHHHHHHHHhCC-CeEEEEeCCch
Confidence 4567898886 55544 788999999999 79999987654
No 112
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=25.75 E-value=73 Score=24.52 Aligned_cols=106 Identities=17% Similarity=0.111 Sum_probs=56.3
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCCCcCcccccCCCceeeeecccCCceeEEeCCChHHHHHHh
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLG 93 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~sit~~~pl~v~~~~~~g~~~~~v~GTPaDcV~~a 93 (213)
.|+||||==-|. -| ++|++.|.+.| ++|+++.-..++.. .+.. +...+.+|=+=.+.+.-+
T Consensus 4 m~~ilItGatG~--iG-~~l~~~L~~~g-~~V~~~~r~~~~~~-----~~~~----------~~~~~~~Dl~d~~~~~~~ 64 (227)
T 3dhn_A 4 VKKIVLIGASGF--VG-SALLNEALNRG-FEVTAVVRHPEKIK-----IENE----------HLKVKKADVSSLDEVCEV 64 (227)
T ss_dssp CCEEEEETCCHH--HH-HHHHHHHHTTT-CEEEEECSCGGGCC-----CCCT----------TEEEECCCTTCHHHHHHH
T ss_pred CCEEEEEcCCch--HH-HHHHHHHHHCC-CEEEEEEcCcccch-----hccC----------ceEEEEecCCCHHHHHHH
Confidence 478999922111 12 67888888888 78888765432210 0111 122334444444444444
Q ss_pred hhccCCCCCCcEEEecCCCCCcC--cccccchhhHHHHHHHHHcCCCEEE-EEe
Q 028146 94 VSQALFPSVPDLVISGINMGSNC--GYHVVYSGTVAGAREAFFHGVPSVS-ISY 144 (213)
Q Consensus 94 l~~~l~~~~PDLVvSGIN~G~N~--g~dv~ySGTVgAA~ea~~~GiPaIA-vS~ 144 (213)
+. ++|.||.-.....+- -.++...||.-....+...|++-+- +|.
T Consensus 65 ~~------~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 65 CK------GADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp HT------TCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred hc------CCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 43 579998643222111 1234567887766666668886444 453
No 113
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=25.57 E-value=49 Score=25.30 Aligned_cols=34 Identities=9% Similarity=0.243 Sum_probs=25.0
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEE
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQV 47 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~V 47 (213)
++.+|||. ||.+.+-+ +++..+.|++.|...|.+
T Consensus 119 ~gk~VllV-DDvitTG~Tl~~~~~~L~~~Ga~~V~~ 153 (175)
T 1vch_A 119 LNQRVVLV-SDVVASGETMRAMEKMVLRAGGHVVAR 153 (175)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEE-eccccchHHHHHHHHHHHHcCCeEEEE
Confidence 46689998 99888633 678889999988444433
No 114
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=25.49 E-value=1.2e+02 Score=24.51 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=26.5
Q ss_pred CCCCeEEEecCCCCC-CccH-HHHHHHHHhcCCceEEEEec
Q 028146 12 DHKPTIMVTNDDGID-APGL-RSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~-s~Gi-~aL~~aL~~~g~~~V~VVAP 50 (213)
-+...+||| |=. +.|| ++.++.|.+.| ++|+++.-
T Consensus 4 l~gK~alVT---Gaa~~~GIG~aiA~~la~~G-a~Vvi~~r 40 (256)
T 4fs3_A 4 LENKTYVIM---GIANKRSIAFGVAKVLDQLG-AKLVFTYR 40 (256)
T ss_dssp CTTCEEEEE---CCCSTTCHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCEEEEE---CCCCCchHHHHHHHHHHHCC-CEEEEEEC
Confidence 356779999 433 2477 78999999999 79988864
No 115
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=25.38 E-value=60 Score=28.40 Aligned_cols=44 Identities=25% Similarity=0.086 Sum_probs=38.4
Q ss_pred CCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEee
Q 028146 102 VPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (213)
Q Consensus 102 ~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~ 145 (213)
+.|.||.|-..=.--|.-+.-.||...|+-|..+|+|-+.++-.
T Consensus 189 ~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~a~~ 232 (315)
T 3ecs_A 189 KADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAES 232 (315)
T ss_dssp GCSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCG
T ss_pred hCCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEEecc
Confidence 78999999887666677788899999999999999999988643
No 116
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=25.32 E-value=53 Score=25.79 Aligned_cols=33 Identities=18% Similarity=0.034 Sum_probs=25.2
Q ss_pred CeEEEecCCC-CCCccHHHHHHHHHhcCCceEEEEec
Q 028146 15 PTIMVTNDDG-IDAPGLRSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 15 ~~ILlTNDDG-i~s~Gi~aL~~aL~~~g~~~V~VVAP 50 (213)
|||-|.+|++ ++- =..|.+.|++.| |+|+=+-|
T Consensus 2 MkIaigsDhaG~~l--K~~i~~~L~~~G-~eV~D~G~ 35 (149)
T 2vvr_A 2 KKIAFGCDHVGFIL--KHEIVAHLVERG-VEVIDKGT 35 (149)
T ss_dssp CEEEEEECTTGGGG--HHHHHHHHHHTT-CEEEECCC
T ss_pred cEEEEEeCchhHHH--HHHHHHHHHHCC-CEEEEeCC
Confidence 7899999987 442 345888999988 78877655
No 117
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=25.15 E-value=63 Score=27.30 Aligned_cols=37 Identities=8% Similarity=0.100 Sum_probs=27.3
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCC
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
..|+||..+.- ...|...|.++|++.| .+|.+.-+..
T Consensus 4 m~~vLiV~g~~-~~~~a~~l~~aL~~~g-~~V~~i~~~~ 40 (259)
T 3rht_A 4 MTRVLYCGDTS-LETAAGYLAGLMTSWQ-WEFDYIPSHV 40 (259)
T ss_dssp --CEEEEESSC-TTTTHHHHHHHHHHTT-CCCEEECTTS
T ss_pred CceEEEECCCC-chhHHHHHHHHHHhCC-ceEEEecccc
Confidence 35799995433 3468999999999999 5998877654
No 118
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=24.94 E-value=2e+02 Score=23.84 Aligned_cols=32 Identities=28% Similarity=0.288 Sum_probs=22.8
Q ss_pred CCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEee
Q 028146 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (213)
Q Consensus 101 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~ 145 (213)
.+||+||+.. ...++...|..+|||.+.+...
T Consensus 127 ~~pD~Vv~d~-------------~~~~~~~~A~~~gip~~~~~~~ 158 (400)
T 4amg_A 127 WRPDLVVHTP-------------TQGAGPLTAAALQLPCVELPLG 158 (400)
T ss_dssp HCCSEEEECT-------------TCTHHHHHHHHTTCCEEECCSS
T ss_pred cCCCEEEECc-------------chHHHHHHHHHcCCCceeeccc
Confidence 3799999742 2235566777899999987653
No 119
>1yd9_A Core histone macro-H2A.1; alpha-beta structure, A1PP domain, macro-domain, structural protein; 1.60A {Rattus norvegicus} SCOP: c.50.1.2 PDB: 1zr3_A* 2fxk_A 3iid_A* 3iif_A* 1zr5_A
Probab=24.83 E-value=2.6e+02 Score=22.16 Aligned_cols=67 Identities=18% Similarity=0.048 Sum_probs=43.4
Q ss_pred CcEEEe--cCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEeecCCCCCCCccHHHHHHHHHHHHHHHH
Q 028146 103 PDLVIS--GINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAIL 171 (213)
Q Consensus 103 PDLVvS--GIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~ 171 (213)
...||- ||..+.....+.+++..-.+-..|..+|+.+|||-.=. .+. -..+++.+++.+.+-+.+++
T Consensus 91 ~k~VIH~vgP~~~~~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~Is-tG~-~g~p~~~aa~i~~~~v~~~l 159 (193)
T 1yd9_A 91 AKFVIHCNSPVWGSDKCEELLEKTVKNCLALADDRKLKSIAFPSIG-SGR-NGFPKQTAAQLILKAISSYF 159 (193)
T ss_dssp SSEEEEECCCCTTSTTHHHHHHHHHHHHHHHHHHTTCSEEEECCCS-BST-TCBCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCcCCcchHHHHHHHHHHHHHHHHHhCCceEeecccc-cCC-CCCCHHHHHHHHHHHHHHHH
Confidence 455654 77766443345677776666666777999999996421 111 23568888888776666554
No 120
>2h8g_A 5'-methylthioadenosine nucleosidase; protein-adenine complex, hydrolase; HET: ADE; 1.50A {Arabidopsis thaliana} PDB: 2qsu_A 2qtg_A* 2qtt_A* 3lgs_A*
Probab=24.70 E-value=1.7e+02 Score=24.18 Aligned_cols=50 Identities=16% Similarity=0.042 Sum_probs=28.1
Q ss_pred hHHHHHHHHHcCCCEEEEEeecCC-CCCC--CccH----HHHHHHHHHHHHHHHHHH
Q 028146 125 TVAGAREAFFHGVPSVSISYDWVG-GKSN--VNDY----TLAAEACLPIINAILAEI 174 (213)
Q Consensus 125 TVgAA~ea~~~GiPaIAvS~~~~~-~~~~--~~~~----~~aa~~~~~li~~l~~~~ 174 (213)
+.+-|.-|..+|+|.+++..-++. +... ..+| +.+++.+.+++.++++.+
T Consensus 203 ~aa~a~va~~~gip~~~Ir~ISD~a~~~~~s~~~~~~~~~~aa~~~~~~l~~~l~~l 259 (267)
T 2h8g_A 203 GAAVAYVADLLKIPVVFLKAVTDLVDGDKPTAEEFLQNLTVVTAALEGTATKVINFI 259 (267)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEETTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEECccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345566677899999999763221 1111 1234 345555556666666544
No 121
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=24.68 E-value=67 Score=26.80 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=27.0
Q ss_pred CCeEEEecCCCCCCcc---HHHHHHHHHhcCCceEEEEec
Q 028146 14 KPTIMVTNDDGIDAPG---LRSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~G---i~aL~~aL~~~g~~~V~VVAP 50 (213)
+|||-|-+|+...-.+ -..|.+.|++.| |+|+=+.|
T Consensus 3 ~MkIaIgsDha~~lKn~ilk~~i~~~L~~~G-~eV~D~G~ 41 (216)
T 2ppw_A 3 AMKIALINENSQASKNHIIYDSLKEATDKKG-YQLFNYGM 41 (216)
T ss_dssp CCEEEECCCTTTGGGHHHHHHHHHHHHHHHT-CEEEECSC
T ss_pred CcEEEEEcCChHhhhhhhHHHHHHHHHHHCC-CEEEEeCC
Confidence 5999999999932221 158889999999 78877655
No 122
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=24.62 E-value=47 Score=28.20 Aligned_cols=31 Identities=10% Similarity=0.010 Sum_probs=25.5
Q ss_pred CCCCCccHHHHHHHHHhcCCceEEEEecCCCC
Q 028146 23 DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (213)
Q Consensus 23 DGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (213)
||++-.-+...++.|+..| ++|.+++|..+.
T Consensus 71 ~G~~~~E~~~p~~vL~~ag-~~v~i~S~~g~~ 101 (291)
T 1n57_A 71 TGNHPIETLLPLYHLHAAG-FEFEVATISGLM 101 (291)
T ss_dssp CCBCHHHHHHHHHHHHHTT-CCEEEEESSSCC
T ss_pred CCCcHHHHHHHHHHHHHCC-CEEEEEeCCCCc
Confidence 4677777888899999998 699999997653
No 123
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=24.54 E-value=61 Score=22.25 Aligned_cols=39 Identities=26% Similarity=0.239 Sum_probs=21.1
Q ss_pred CCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEee
Q 028146 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (213)
Q Consensus 101 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~ 145 (213)
.+||+||..++.....|.++ -..+......+|.|.+|..
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~------~~~l~~~~~~~~ii~~t~~ 88 (130)
T 3eod_A 50 FTPDLMICDIAMPRMNGLKL------LEHIRNRGDQTPVLVISAT 88 (130)
T ss_dssp CCCSEEEECCC-----CHHH------HHHHHHTTCCCCEEEEECC
T ss_pred CCCCEEEEecCCCCCCHHHH------HHHHHhcCCCCCEEEEEcC
Confidence 46999999988765444332 1222223357888888853
No 124
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=24.53 E-value=36 Score=28.27 Aligned_cols=19 Identities=42% Similarity=0.461 Sum_probs=16.1
Q ss_pred chhhHHHHHHHHHcCCCEEEE
Q 028146 122 YSGTVAGAREAFFHGVPSVSI 142 (213)
Q Consensus 122 ySGTVgAA~ea~~~GiPaIAv 142 (213)
-||++ .+||..+|+|.|+.
T Consensus 289 ~sg~~--~lEA~a~G~Pvi~~ 307 (375)
T 3beo_A 289 DSGGV--QEEAPSLGVPVLVL 307 (375)
T ss_dssp CCHHH--HHHHHHHTCCEEEC
T ss_pred CCCCh--HHHHHhcCCCEEEe
Confidence 35765 88999999999987
No 125
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=24.16 E-value=90 Score=23.67 Aligned_cols=33 Identities=12% Similarity=0.146 Sum_probs=22.5
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecC
Q 028146 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPD 51 (213)
Q Consensus 15 ~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (213)
||||||==-|. -| ++|++.|.+.| ++|+++.-.
T Consensus 1 MkvlVtGatG~--iG-~~l~~~L~~~g-~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGR--AG-SRILEEAKNRG-HEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSH--HH-HHHHHHHHHTT-CEEEEEESC
T ss_pred CeEEEEcCCch--hH-HHHHHHHHhCC-CEEEEEEcC
Confidence 67888822221 12 57888888888 799888654
No 126
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=23.74 E-value=51 Score=25.40 Aligned_cols=38 Identities=16% Similarity=0.232 Sum_probs=29.0
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcC-CceEEEEecC
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTN-RYTVQVCAPD 51 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g-~~~V~VVAP~ 51 (213)
++.+|||. ||.+.+-+ ++++.+.|++.| ...|.++++.
T Consensus 97 ~gk~VllV-DDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~ 136 (181)
T 1a3c_A 97 TDQKVILV-DDVLYTGRTVRAGMDALVDVGRPSSIQLAVLV 136 (181)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHHHCCCSEEEEEEEE
T ss_pred CCCEEEEE-eCccCcHHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence 45688888 99888633 778889999886 5677777765
No 127
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=23.67 E-value=1e+02 Score=25.07 Aligned_cols=43 Identities=14% Similarity=0.189 Sum_probs=28.1
Q ss_pred cccccccCCCCCCeEEEecCCCCCCccH-HHHHHHHHhcCCceEEEEec
Q 028146 3 RRGIAIVNSDHKPTIMVTNDDGIDAPGL-RSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 3 ~~~~~~~~~~~~~~ILlTNDDGi~s~Gi-~aL~~aL~~~g~~~V~VVAP 50 (213)
+.|-..|...+..++|||= .+-|| +++++.|.+.| ++|+++.-
T Consensus 16 ~~g~~~m~~l~gk~vlVTG----as~gIG~aia~~la~~G-~~V~~~~r 59 (266)
T 3grp_A 16 TQGPGSMFKLTGRKALVTG----ATGGIGEAIARCFHAQG-AIVGLHGT 59 (266)
T ss_dssp -----CTTCCTTCEEEESS----TTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCcchhccCCCEEEEeC----CCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 3455566666677899993 23466 68899999999 78888753
No 128
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=23.58 E-value=93 Score=23.78 Aligned_cols=32 Identities=19% Similarity=0.153 Sum_probs=21.6
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEec
Q 028146 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 15 ~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP 50 (213)
|+||||==-|. -| ++|++.|.+.| ++|+++.-
T Consensus 1 MkilVtGatG~--iG-~~l~~~L~~~g-~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGR--AG-SAIVAEARRRG-HEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSH--HH-HHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEcCCCH--HH-HHHHHHHHHCC-CEEEEEEe
Confidence 67888832221 12 67788888888 78988864
No 129
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=23.31 E-value=43 Score=28.00 Aligned_cols=20 Identities=35% Similarity=0.436 Sum_probs=16.5
Q ss_pred chhhHHHHHHHHHcCCCEEEEE
Q 028146 122 YSGTVAGAREAFFHGVPSVSIS 143 (213)
Q Consensus 122 ySGTVgAA~ea~~~GiPaIAvS 143 (213)
-||++ ..||..+|+|.|+.+
T Consensus 281 ~S~g~--~lEA~a~G~PvI~~~ 300 (376)
T 1v4v_A 281 DSGGL--QEEGAALGVPVVVLR 300 (376)
T ss_dssp SCHHH--HHHHHHTTCCEEECS
T ss_pred CCcCH--HHHHHHcCCCEEecc
Confidence 47766 679999999999864
No 130
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=23.21 E-value=83 Score=29.33 Aligned_cols=47 Identities=9% Similarity=-0.034 Sum_probs=32.0
Q ss_pred hhhHHHHHHHHHcCCCEEEEEeecCCCCC-----CCccHHHHHHHHHHHHHHH
Q 028146 123 SGTVAGAREAFFHGVPSVSISYDWVGGKS-----NVNDYTLAAEACLPIINAI 170 (213)
Q Consensus 123 SGTVgAA~ea~~~GiPaIAvS~~~~~~~~-----~~~~~~~aa~~~~~li~~l 170 (213)
.||+| ++.++..|||++.+|.....-.+ ...|++.+.++...+++.+
T Consensus 435 GgTig-~i~~s~~Gi~tvdIGiP~ryMHS~~E~~~~~D~~~~v~Ll~af~~~~ 486 (496)
T 3vat_A 435 GTTIG-PILASRLGLRVLDLGSPQLAMHSIRETACTTGVLQTITLFKGFFELF 486 (496)
T ss_dssp CCCHH-HHHHHHHTCEEEEEECEEESTTSSSEEEESHHHHHHHHHHHHHHHHH
T ss_pred cchHH-HHHhcccCCcEEEecHhhhccccHHHHhhHHHHHHHHHHHHHHHHhH
Confidence 47888 47778899999999987532111 2357777777766666554
No 131
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=23.20 E-value=30 Score=25.61 Aligned_cols=41 Identities=12% Similarity=0.046 Sum_probs=23.8
Q ss_pred ccCCCCCCeEEEecCCCCCC--ccHHHHHHHHHhcCC-ceEEEEe
Q 028146 8 IVNSDHKPTIMVTNDDGIDA--PGLRSLVRVLVSTNR-YTVQVCA 49 (213)
Q Consensus 8 ~~~~~~~~~ILlTNDDGi~s--~Gi~aL~~aL~~~g~-~~V~VVA 49 (213)
.|.++.++-|++++||--.+ -.++.-.. +++.|. +||.|+.
T Consensus 3 ~~~~~~K~~ivi~s~d~~~~~~~al~~A~~-a~~~G~~~eV~i~~ 46 (117)
T 2fb6_A 3 AMSANDKLTILWTTDNKDTVFNMLAMYALN-SKNRGWWKHINIIL 46 (117)
T ss_dssp CSSTTSEEEEEECCCCHHHHHHTHHHHHHH-HHHHTSCSEEEEEE
T ss_pred ccccCCeEEEEEEcCChHHHHHHHHHHHHH-HHHcCCCCcEEEEE
Confidence 46666667799999884332 13333233 334553 5888875
No 132
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=23.15 E-value=77 Score=21.90 Aligned_cols=27 Identities=22% Similarity=0.513 Sum_probs=16.2
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 028146 12 DHKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g 41 (213)
..+++|||..||-... ..|.+.|++.|
T Consensus 5 ~~~~~ilivdd~~~~~---~~l~~~L~~~g 31 (136)
T 3hdv_A 5 AARPLVLVVDDNAVNR---EALILYLKSRG 31 (136)
T ss_dssp --CCEEEEECSCHHHH---HHHHHHHHHTT
T ss_pred CCCCeEEEECCCHHHH---HHHHHHHHHcC
Confidence 3568899999885433 34455555555
No 133
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=23.15 E-value=1e+02 Score=22.95 Aligned_cols=106 Identities=19% Similarity=0.112 Sum_probs=54.7
Q ss_pred CeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCCCcCcccccCCCceeeeecccCCceeEEeCCChHHHHHHhh
Q 028146 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGV 94 (213)
Q Consensus 15 ~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~Sg~g~sit~~~pl~v~~~~~~g~~~~~v~GTPaDcV~~al 94 (213)
|+||||=--|. -| ++|++.|.+.| ++|+++....++.. .. . ..+...+.+|=+=.+.+.-++
T Consensus 4 ~~ilVtGatG~--iG-~~l~~~l~~~g-~~V~~~~r~~~~~~-----~~-~--------~~~~~~~~~D~~~~~~~~~~~ 65 (206)
T 1hdo_A 4 KKIAIFGATGQ--TG-LTTLAQAVQAG-YEVTVLVRDSSRLP-----SE-G--------PRPAHVVVGDVLQAADVDKTV 65 (206)
T ss_dssp CEEEEESTTSH--HH-HHHHHHHHHTT-CEEEEEESCGGGSC-----SS-S--------CCCSEEEESCTTSHHHHHHHH
T ss_pred CEEEEEcCCcH--HH-HHHHHHHHHCC-CeEEEEEeChhhcc-----cc-c--------CCceEEEEecCCCHHHHHHHH
Confidence 78999943332 12 66788888888 79988865332110 00 0 012233444444334444344
Q ss_pred hccCCCCCCcEEEecCCCCCc-CcccccchhhHHHHHHHHHcCCCEEE-EEe
Q 028146 95 SQALFPSVPDLVISGINMGSN-CGYHVVYSGTVAGAREAFFHGVPSVS-ISY 144 (213)
Q Consensus 95 ~~~l~~~~PDLVvSGIN~G~N-~g~dv~ySGTVgAA~ea~~~GiPaIA-vS~ 144 (213)
. .+|.||.=.-.... --.++...||...+..+...|++-+- +|.
T Consensus 66 ~------~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 66 A------GQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp T------TCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred c------CCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 2 47888753321111 11235566777665555557876544 554
No 134
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=22.97 E-value=81 Score=26.55 Aligned_cols=37 Identities=14% Similarity=0.194 Sum_probs=25.8
Q ss_pred CeEEEecCCCCCCcc----HHHHHHHHHhcCCceEEEEecCCC
Q 028146 15 PTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 15 ~~ILlTNDDGi~s~G----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
|||++....-...-| ...|+++|.+. |+|.|++....
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~--~~V~v~~~~~~ 41 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA--HEVIVFGIHAF 41 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT--SEEEEEEESCC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc--CCeEEEeecCC
Confidence 788777654333334 56788888876 69999988665
No 135
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=22.95 E-value=76 Score=27.46 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=28.5
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEEEe
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCA 49 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~VVA 49 (213)
++.++||. ||.+.+-+ +.+.++.|++.|-.+|.+++
T Consensus 216 ~gk~VlLV-DDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~ 252 (317)
T 1dku_A 216 EGKTAILI-DDIIDTAGTITLAANALVENGAKEVYACC 252 (317)
T ss_dssp TTCEEEEE-CSEESSCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEE-ecccCCCHHHHHHHHHHHHcCCcEEEEEE
Confidence 45678887 99998754 67888999998866787777
No 136
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=22.94 E-value=58 Score=25.49 Aligned_cols=39 Identities=10% Similarity=0.134 Sum_probs=28.5
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEEEecCC
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
++.+|||. ||-+.+-+ +++..+.|++.|...|.+++...
T Consensus 119 ~gk~VllV-DDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~ 158 (197)
T 1y0b_A 119 DQDHVLII-DDFLANGQAAHGLVSIVKQAGASIAGIGIVIE 158 (197)
T ss_dssp TTCEEEEE-EEEESSCHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CcCEEEEE-EcccccCHHHHHHHHHHHHCCCEEEEEEEEEE
Confidence 56789998 99888633 88899999998854555555443
No 137
>4fay_A Microcompartments protein; BMC domain, shell protein, glycerol-binding protein; 1.56A {Lactobacillus reuteri}
Probab=22.79 E-value=30 Score=29.77 Aligned_cols=53 Identities=15% Similarity=0.250 Sum_probs=40.7
Q ss_pred EeCCChHHHHHHhhhccCCCCCCcEE-EecCCCCCcCccc--ccchhhHHHHHHHH
Q 028146 81 AVSGTPADCASLGVSQALFPSVPDLV-ISGINMGSNCGYH--VVYSGTVAGAREAF 133 (213)
Q Consensus 81 ~v~GTPaDcV~~al~~~l~~~~PDLV-vSGIN~G~N~g~d--v~ySGTVgAA~ea~ 133 (213)
++.+.|+-.-.++.+..+..-..||| +..|..|.|.|-- ++.+|.+||.++|+
T Consensus 176 iie~~p~a~givaaD~AlKAA~V~lv~~~~P~~gt~~ggk~~~~lTGd~sAVkaAv 231 (258)
T 4fay_A 176 LICGCPSGIGVVMGDKALKTAGVEPLNFTSPSHGTSFSNEGCLTITGDSGAVRQAV 231 (258)
T ss_dssp EEEEESHHHHHHHHHHHHHHSCCEEEEEEBTTBSSSSCSCEEEEEESCHHHHHHHH
T ss_pred EEEcCcHHHHHHHHHHHHhhCCeEEEEEEcCCCCccccceEEEEEEeCHHHHHHHH
Confidence 35688887777777755533568887 5788899999853 67899999988876
No 138
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=22.74 E-value=61 Score=25.31 Aligned_cols=29 Identities=24% Similarity=0.244 Sum_probs=23.7
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCC
Q 028146 13 HKPTIMVTNDDGIDAPGLRSLVRVLVSTNR 42 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~ 42 (213)
.+..|.||=|||+.. +...+.+.|++.+.
T Consensus 3 ~~~~V~LTFDDG~~~-~~~~il~iL~~~~v 31 (195)
T 2cc0_A 3 CNGYVGLTFDDGPSG-STQSLLNALRQNGL 31 (195)
T ss_dssp CSEEEEEEEESCCST-THHHHHHHHHHTTC
T ss_pred CCCEEEEEEcCCCch-hHHHHHHHHHHcCC
Confidence 345699999999975 48899999998874
No 139
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=22.64 E-value=54 Score=28.98 Aligned_cols=36 Identities=8% Similarity=0.059 Sum_probs=25.5
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCC
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (213)
..+|||+|-.. -+ ..+.+++++.| ++|+++.+..+.
T Consensus 6 ~k~ILI~g~g~---~~-~~i~~a~~~~G-~~vv~v~~~~~~ 41 (461)
T 2dzd_A 6 IRKVLVANRGE---IA-IRVFRACTELG-IRTVAIYSKEDV 41 (461)
T ss_dssp CSEEEECSCHH---HH-HHHHHHHHHHT-CEEEEEECGGGT
T ss_pred CcEEEEECCcH---HH-HHHHHHHHHcC-CEEEEEECCccc
Confidence 45899998531 12 45778899999 699998775543
No 140
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=22.52 E-value=1.4e+02 Score=24.34 Aligned_cols=33 Identities=27% Similarity=0.362 Sum_probs=23.7
Q ss_pred CCCeEEEecCCCCCCccH-HHHHHHHHhcCCceEEEEec
Q 028146 13 HKPTIMVTNDDGIDAPGL-RSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~Gi-~aL~~aL~~~g~~~V~VVAP 50 (213)
.+|+||||==-| +| ++|++.|.+.| ++|+++.-
T Consensus 4 ~~~~vlVTGatG----~iG~~l~~~L~~~G-~~V~~~~r 37 (341)
T 3enk_A 4 TKGTILVTGGAG----YIGSHTAVELLAHG-YDVVIADN 37 (341)
T ss_dssp SSCEEEEETTTS----HHHHHHHHHHHHTT-CEEEEECC
T ss_pred CCcEEEEecCCc----HHHHHHHHHHHHCC-CcEEEEec
Confidence 568999993222 23 67888898888 78888754
No 141
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=22.51 E-value=68 Score=26.44 Aligned_cols=31 Identities=19% Similarity=0.181 Sum_probs=26.2
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCC
Q 028146 11 SDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNR 42 (213)
Q Consensus 11 ~~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~ 42 (213)
+..+..|.||=|||+. .+...+.+.|++.|.
T Consensus 38 ~~~~k~V~LTFDDGp~-~~~~~il~iL~~~~v 68 (254)
T 2iw0_A 38 CTQPGLVALTYDDGPF-TFTPQLLDILKQNDV 68 (254)
T ss_dssp CSSSSEEEEEEESCSC-TTHHHHHHHHHHHTC
T ss_pred CCCCCEEEEEeccCch-hhHHHHHHHHHHcCC
Confidence 4455679999999998 789999999998874
No 142
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=22.50 E-value=1.1e+02 Score=21.19 Aligned_cols=30 Identities=13% Similarity=0.247 Sum_probs=18.1
Q ss_pred cCCCCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 028146 9 VNSDHKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (213)
Q Consensus 9 ~~~~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g 41 (213)
|....+++|||.-||-... ..|.+.|...|
T Consensus 2 ~~~~~~~~ILivdd~~~~~---~~l~~~L~~~g 31 (136)
T 1dcf_A 2 MSNFTGLKVLVMDENGVSR---MVTKGLLVHLG 31 (136)
T ss_dssp CCCCTTCEEEEECSCHHHH---HHHHHHHHHTT
T ss_pred CcccCCCeEEEEeCCHHHH---HHHHHHHHHcC
Confidence 4455678999998874332 33444555555
No 143
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=22.43 E-value=67 Score=22.86 Aligned_cols=40 Identities=25% Similarity=0.224 Sum_probs=23.2
Q ss_pred CCCcEEEecCCCCCcCcccccchhhHHHHHHH---HHcCCCEEEEEee
Q 028146 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREA---FFHGVPSVSISYD 145 (213)
Q Consensus 101 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea---~~~GiPaIAvS~~ 145 (213)
.+||+||.-++...--|.++. ..-++- ....+|.|.+|..
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~-----~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDML-----KQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHH-----HHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHH-----HHHHhchhccCCCCeEEEEeCC
Confidence 369999999987654343321 111111 1235889999864
No 144
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=22.43 E-value=36 Score=27.36 Aligned_cols=30 Identities=23% Similarity=0.157 Sum_probs=23.6
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCC
Q 028146 13 HKPTIMVTNDDGIDAPGLRSLVRVLVSTNR 42 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~ 42 (213)
.+..|.||=|||+.......+.+.|++.|.
T Consensus 3 ~~k~V~LTFDDG~~~~~t~~il~iL~~~~v 32 (216)
T 2c71_A 3 ANKLVALTFDDGPDNVLTARVLDKLDKYNV 32 (216)
T ss_dssp --CEEEEEEESCCCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEEecCCCcccHHHHHHHHHHcCC
Confidence 345699999999987667788899998774
No 145
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=22.21 E-value=1.4e+02 Score=24.58 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=23.1
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhc-CCceEEEEecC
Q 028146 13 HKPTIMVTNDDGIDAPGLRSLVRVLVST-NRYTVQVCAPD 51 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~Gi~aL~~aL~~~-g~~~V~VVAP~ 51 (213)
.+|+|||++-.+. ..|+++|++. |.++|+++-+.
T Consensus 3 ~~~~Ili~g~g~~-----~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 3 QKPHLLITSAGRR-----AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TCCEEEEESCTTC-----HHHHHHHHHHCCSSEEEEEESC
T ss_pred ccceEEEecCCch-----HHHHHHHHHhcCCCEEEEEeCC
Confidence 5689999965443 4678888776 32577777554
No 146
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=22.19 E-value=97 Score=22.02 Aligned_cols=27 Identities=26% Similarity=0.306 Sum_probs=16.4
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 028146 12 DHKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g 41 (213)
.++++|||..||-.. ...|.+.|...|
T Consensus 5 ~~~~~iLivdd~~~~---~~~l~~~L~~~g 31 (154)
T 2rjn_A 5 YKNYTVMLVDDEQPI---LNSLKRLIKRLG 31 (154)
T ss_dssp CSCCEEEEECSCHHH---HHHHHHHHHTTT
T ss_pred CCCCeEEEEcCCHHH---HHHHHHHHHHcC
Confidence 357889999888432 233444555444
No 147
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=22.19 E-value=71 Score=22.46 Aligned_cols=27 Identities=11% Similarity=0.026 Sum_probs=16.3
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcC
Q 028146 12 DHKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g 41 (213)
..+++|||..||-..... |.+.|...|
T Consensus 6 ~~~~~iLivd~~~~~~~~---l~~~L~~~g 32 (147)
T 2zay_A 6 GKWWRIMLVDTQLPALAA---SISALSQEG 32 (147)
T ss_dssp --CEEEEEECTTGGGGHH---HHHHHHHHT
T ss_pred CCCceEEEEeCCHHHHHH---HHHHHHHcC
Confidence 356889999998655444 444555445
No 148
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=22.14 E-value=63 Score=24.92 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=29.2
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEEEecCCC
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
++.+|||. ||.+.+-+ +.+..+.|++.|...|.+++...-
T Consensus 119 ~gk~VllV-DDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~ 159 (180)
T 1zn8_A 119 PGQRVVVV-DDLLATGGTMNAACELLGRLQAEVLECVSLVEL 159 (180)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCEEEEE-cCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEc
Confidence 46689988 99888633 788889999988555666655443
No 149
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=22.07 E-value=1.1e+02 Score=23.90 Aligned_cols=35 Identities=11% Similarity=0.082 Sum_probs=23.5
Q ss_pred CCCCeEEEecCCCCCCccH-HHHHHHHHhcCCceEEEEecC
Q 028146 12 DHKPTIMVTNDDGIDAPGL-RSLVRVLVSTNRYTVQVCAPD 51 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~s~Gi-~aL~~aL~~~g~~~V~VVAP~ 51 (213)
.+.|+||||= -. -|| ++|++.|.+.| ++|+++.-.
T Consensus 19 l~~~~ilVtG---at-G~iG~~l~~~L~~~G-~~V~~~~R~ 54 (236)
T 3e8x_A 19 FQGMRVLVVG---AN-GKVARYLLSELKNKG-HEPVAMVRN 54 (236)
T ss_dssp --CCEEEEET---TT-SHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred cCCCeEEEEC---CC-ChHHHHHHHHHHhCC-CeEEEEECC
Confidence 3578999993 21 223 57788888888 799888643
No 150
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=21.81 E-value=97 Score=27.93 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=27.3
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEEEEe
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCA 49 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~VVA 49 (213)
++.+|||. ||.+.+-+ +++.++.|++.|-.+|.+++
T Consensus 337 ~gk~VlLV-DDvitTG~Tl~~a~~~L~~~Ga~~V~~~~ 373 (459)
T 1ao0_A 337 EGKRVVMV-DDSIVRGTTSRRIVTMLREAGATEVHVKI 373 (459)
T ss_dssp TTCEEEEE-ESCCSSSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCeEEEE-eeeecCHHHHHHHHHHHHHcCCCEEEEEE
Confidence 45678888 99998633 78889999999865666654
No 151
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=21.70 E-value=90 Score=21.75 Aligned_cols=39 Identities=13% Similarity=0.184 Sum_probs=23.5
Q ss_pred CCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEee
Q 028146 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (213)
Q Consensus 101 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~ 145 (213)
.+||+||..++.....|.++ -..+......+|.|.+|..
T Consensus 48 ~~~dlvi~d~~l~~~~g~~~------~~~l~~~~~~~~ii~ls~~ 86 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMDI------LREIKKITPHMAVIILTGH 86 (143)
T ss_dssp TTCCEEEEESCCSSSCHHHH------HHHHHHHCTTCEEEEEECT
T ss_pred CCCCEEEEeCCCCCCcHHHH------HHHHHHhCCCCeEEEEECC
Confidence 47999999988765433321 1122223457888888753
No 152
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=21.60 E-value=1.2e+02 Score=23.70 Aligned_cols=37 Identities=16% Similarity=0.063 Sum_probs=26.2
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCC
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
.|||-|.+|++=. +-=..|.+.|++.| |+|+=+-|.+
T Consensus 7 ~mkI~igsDhaG~-~lK~~i~~~L~~~G-~eV~D~G~~~ 43 (148)
T 4em8_A 7 VKRVFLSSDHAGV-ELRLFLSAYLRDLG-CEVFDCGCDP 43 (148)
T ss_dssp CSEEEEEECGGGH-HHHHHHHHHHHHTT-CEEEECCCCT
T ss_pred eeEEEEEECchhH-HHHHHHHHHHHHCC-CEEEEeCCCC
Confidence 5789999998421 11236778888888 7888777754
No 153
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=21.53 E-value=1.1e+02 Score=22.71 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=26.1
Q ss_pred CCCeEEEec--CCCCCCccHHHHHHHHHhcCCceEEEE
Q 028146 13 HKPTIMVTN--DDGIDAPGLRSLVRVLVSTNRYTVQVC 48 (213)
Q Consensus 13 ~~~~ILlTN--DDGi~s~Gi~aL~~aL~~~g~~~V~VV 48 (213)
.+.+||+.. .| ++.-|++.+...|+..| ++|+=.
T Consensus 2 ~~~~vvla~~~~d-~HdiG~~~v~~~l~~~G-~~Vi~l 37 (137)
T 1ccw_A 2 EKKTIVLGVIGSD-CHAVGNKILDHAFTNAG-FNVVNI 37 (137)
T ss_dssp CCCEEEEEEETTC-CCCHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEEeCCCc-hhHHHHHHHHHHHHHCC-CEEEEC
Confidence 356777763 44 88899999999999999 687744
No 154
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=21.46 E-value=93 Score=21.76 Aligned_cols=33 Identities=21% Similarity=0.331 Sum_probs=24.0
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecC
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPD 51 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (213)
.|+|+|+ |...-|. .+++.|.+.| ++|+++...
T Consensus 4 ~m~i~Ii---G~G~iG~-~~a~~L~~~g-~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIA---GIGRVGY-TLAKSLSEKG-HDIVLIDID 36 (140)
T ss_dssp -CEEEEE---CCSHHHH-HHHHHHHHTT-CEEEEEESC
T ss_pred CCEEEEE---CCCHHHH-HHHHHHHhCC-CeEEEEECC
Confidence 4789999 7655565 4677788788 799988653
No 155
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=21.30 E-value=66 Score=26.21 Aligned_cols=31 Identities=23% Similarity=0.252 Sum_probs=25.8
Q ss_pred CCCCeEEEecCCCCCCccHHHHHHHHHhcCC
Q 028146 12 DHKPTIMVTNDDGIDAPGLRSLVRVLVSTNR 42 (213)
Q Consensus 12 ~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~ 42 (213)
..+..|.||=|||+.+.....+.+.|++.|.
T Consensus 40 ~~~k~V~LTFDDG~~~~~t~~il~iL~~~~v 70 (240)
T 1ny1_A 40 TKEKTIYLTFDNGYENGYTPKVLDVLKKHRV 70 (240)
T ss_dssp TTSSEEEEEEEESSCCSCHHHHHHHHHHTTC
T ss_pred CCCCEEEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 3456799999999998778888899998774
No 156
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=21.26 E-value=98 Score=24.27 Aligned_cols=38 Identities=16% Similarity=0.228 Sum_probs=29.3
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCCC
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~~ 54 (213)
+.-||+. ||++.-=+-.-++.|++.| .+|.++.+..++
T Consensus 6 kV~ill~--dGfe~~E~~~p~~vl~~ag-~~v~~~s~~~~~ 43 (194)
T 4gdh_A 6 KVCLFVA--DGTDEIEFSAPWGIFKRAE-IPIDSVYVGENK 43 (194)
T ss_dssp CEEEEEE--TTCCHHHHHHHHHHHHHTT-CCEEEEEESSCT
T ss_pred EEEEEEC--CCcCHHHHHHHHHHHHHCC-CeEEEEEEcCCC
Confidence 4446776 6898777777889999998 699999886554
No 157
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=21.12 E-value=1.3e+02 Score=23.27 Aligned_cols=31 Identities=10% Similarity=0.131 Sum_probs=19.4
Q ss_pred eEEEecCCCCCCc----cHHHHHHHHHhcCCceEEEEe
Q 028146 16 TIMVTNDDGIDAP----GLRSLVRVLVSTNRYTVQVCA 49 (213)
Q Consensus 16 ~ILlTNDDGi~s~----Gi~aL~~aL~~~g~~~V~VVA 49 (213)
-|||| ||.... .+...++.|++.| -.|+.|+
T Consensus 119 iillT--DG~~~~~~~~~~~~~a~~l~~~g-i~i~~ig 153 (202)
T 1ijb_A 119 ALLLM--ASQEPQRMSRNFVRYVQGLKKKK-VIVIPVG 153 (202)
T ss_dssp EEEEE--CCCCCGGGCTTHHHHHHHHHHTT-EEEEEEE
T ss_pred EEEEc--cCCCCccchHHHHHHHHHHHHCC-CEEEEEe
Confidence 36677 566543 4666777777777 3666654
No 158
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=20.96 E-value=91 Score=22.37 Aligned_cols=40 Identities=23% Similarity=0.352 Sum_probs=23.4
Q ss_pred CCCcEEEecCCCCCcCcccccchhhHHHHHHHH-HcCCCEEEEEee
Q 028146 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREAF-FHGVPSVSISYD 145 (213)
Q Consensus 101 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~-~~GiPaIAvS~~ 145 (213)
.+||+||..++...--|.++. -..++.. ...+|.|.+|..
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~-----~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 50 TRPDLIISDVLMPEMDGYALC-----RWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp CCCSEEEEESCCSSSCHHHHH-----HHHHHSTTTTTSCEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHH-----HHHHhCCCcCCCCEEEEECC
Confidence 479999999887654333211 1111111 257899988853
No 159
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=20.93 E-value=1.5e+02 Score=23.67 Aligned_cols=31 Identities=23% Similarity=0.367 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCCceEE
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQ 46 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~~~V~ 46 (213)
++ +|||. ||-+.+-+ +++..+.|++.| .+++
T Consensus 117 ~g-~VliV-DDvitTG~Tl~~a~~~l~~~G-a~~v 148 (213)
T 1lh0_A 117 QG-RVMLV-DDVITAGTAIRESMEIIQAHG-ATLA 148 (213)
T ss_dssp CS-EEEEE-CSCCSSSCHHHHHHHHHHHTT-CEEE
T ss_pred CC-CEEEE-EecccchHHHHHHHHHHHHCC-CeEE
Confidence 57 89998 99888744 788899999988 4543
No 160
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=20.88 E-value=1.1e+02 Score=24.66 Aligned_cols=37 Identities=19% Similarity=0.139 Sum_probs=24.8
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecC
Q 028146 13 HKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPD 51 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~ 51 (213)
.+|||-|.+|++=. +-=..|.+.|++.| ++|+=+-|.
T Consensus 19 ~~MkIaIgsDhaG~-~lK~~i~~~L~~~G-~eV~D~G~~ 55 (169)
T 3ph3_A 19 SHMKIGIGSDHGGY-NLKREIADFLKKRG-YEVIDFGTH 55 (169)
T ss_dssp --CEEEEEECGGGH-HHHHHHHHHHHHTT-CEEEECCCC
T ss_pred CCCEEEEEeCchHH-HHHHHHHHHHHHCC-CEEEEcCCC
Confidence 56999999998521 11236778888888 788776664
No 161
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=20.85 E-value=91 Score=25.31 Aligned_cols=31 Identities=26% Similarity=0.230 Sum_probs=25.9
Q ss_pred CCCCCeEEEecCCCCCCccHHHHHHHHHhcCC
Q 028146 11 SDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNR 42 (213)
Q Consensus 11 ~~~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~ 42 (213)
+.....|.||=|||+. .+...+.+.|++.|.
T Consensus 29 ~~~~k~VaLTFDDGp~-~~~~~il~iL~~~~v 59 (230)
T 2y8u_A 29 CTTPNTIALTFDDGPS-EYTPQLLDLLSRYSA 59 (230)
T ss_dssp CCSTTEEEEEEESCCC-TTHHHHHHHHHHTTC
T ss_pred CCCCCEEEEEecCCch-hhHHHHHHHHHHcCC
Confidence 4445679999999998 788999999998874
No 162
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=20.70 E-value=1.5e+02 Score=25.20 Aligned_cols=36 Identities=8% Similarity=0.015 Sum_probs=27.1
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCC
Q 028146 13 HKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
.+++|||.+- | +--+.+++++++.| ++|+++-+..+
T Consensus 10 ~~~~ili~g~-g---~~~~~~~~a~~~~G-~~v~~~~~~~~ 45 (391)
T 1kjq_A 10 AATRVMLLGS-G---ELGKEVAIECQRLG-VEVIAVDRYAD 45 (391)
T ss_dssp TCCEEEEESC-S---HHHHHHHHHHHTTT-CEEEEEESSTT
T ss_pred CCCEEEEECC-C---HHHHHHHHHHHHcC-CEEEEEECCCC
Confidence 4689999965 3 22467789999999 69999887654
No 163
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=20.63 E-value=1.2e+02 Score=24.81 Aligned_cols=44 Identities=18% Similarity=0.224 Sum_probs=24.5
Q ss_pred ccccccccCC--CCCCeEEEecCCCCCCccH-HHHHHHHHhcCCceEEEEec
Q 028146 2 ERRGIAIVNS--DHKPTIMVTNDDGIDAPGL-RSLVRVLVSTNRYTVQVCAP 50 (213)
Q Consensus 2 ~~~~~~~~~~--~~~~~ILlTNDDGi~s~Gi-~aL~~aL~~~g~~~V~VVAP 50 (213)
++.|...|+. .++..+|||== +-|| +++++.|.+.| ++|+++.-
T Consensus 15 ~~~g~~sm~~~~l~gk~vlVTGa----s~gIG~aia~~la~~G-~~V~~~~r 61 (277)
T 3gvc_A 15 QTQGPGSMNHPDLAGKVAIVTGA----GAGIGLAVARRLADEG-CHVLCADI 61 (277)
T ss_dssp ------------CTTCEEEETTT----TSTHHHHHHHHHHHTT-CEEEEEES
T ss_pred ccCCCCCCCccCCCCCEEEEECC----CcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 4556677764 34567999932 2355 67899999899 78888753
No 164
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=20.59 E-value=1.2e+02 Score=20.67 Aligned_cols=38 Identities=26% Similarity=0.263 Sum_probs=22.6
Q ss_pred CCcEEEecCCCCC-cCcccccchhhHHHHHHHHHcCCCEEEEEee
Q 028146 102 VPDLVISGINMGS-NCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (213)
Q Consensus 102 ~PDLVvSGIN~G~-N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~ 145 (213)
+||+||..++... -.|.+ +-..+......+|.|.+|..
T Consensus 50 ~~dlvi~d~~l~~~~~g~~------~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 50 AIDGVVTDIRFCQPPDGWQ------VARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp CCCEEEEESCCSSSSCHHH------HHHHHHHHCTTCCEEEEESS
T ss_pred CCCEEEEeeeCCCCCCHHH------HHHHHHhcCCCCCEEEEeCC
Confidence 6899999887653 22322 22222233457888988864
No 165
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=20.55 E-value=1.3e+02 Score=29.30 Aligned_cols=40 Identities=13% Similarity=0.178 Sum_probs=32.8
Q ss_pred CCCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCC
Q 028146 13 HKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
..++|+|-=-||++..-+..++++|+..| .+|.+++|...
T Consensus 533 ~~rkVaILl~dGfe~~El~~p~dvL~~AG-~~V~ivS~~gg 572 (715)
T 1sy7_A 533 KSRRVAIIIADGYDNVAYDAAYAAISANQ-AIPLVIGPRRS 572 (715)
T ss_dssp TTCEEEEECCTTBCHHHHHHHHHHHHHTT-CEEEEEESCSS
T ss_pred CCCEEEEEEcCCCCHHHHHHHHHHHHhcC-CEEEEEECCCC
Confidence 34565555558999999999999999998 69999999764
No 166
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=20.48 E-value=70 Score=25.00 Aligned_cols=29 Identities=17% Similarity=0.337 Sum_probs=23.3
Q ss_pred CCCeEEEecCCCCCCcc-HHHHHHHHHhcCC
Q 028146 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNR 42 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~G-i~aL~~aL~~~g~ 42 (213)
++.+|||. ||-+.+-+ +++..+.|++.|.
T Consensus 125 ~gk~VLlV-DDvitTG~Tl~~a~~~L~~~Ga 154 (190)
T 2dy0_A 125 PGDKVLVV-DDLLATGGTIEATVKLIRRLGG 154 (190)
T ss_dssp TTCEEEEE-EEEESSCHHHHHHHHHHHHTTC
T ss_pred CcCEEEEE-EccccchHHHHHHHHHHHHcCC
Confidence 56789998 99888633 8889999999884
No 167
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=20.25 E-value=4.1e+02 Score=22.78 Aligned_cols=35 Identities=9% Similarity=0.052 Sum_probs=23.7
Q ss_pred CCeEEEecCCCCCCccHHHHHHHHHhcCCceEEEEecCCC
Q 028146 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (213)
Q Consensus 14 ~~~ILlTNDDGi~s~Gi~aL~~aL~~~g~~~V~VVAP~~~ 53 (213)
..+|+|..- | ..+..+.+++++.| ++|+++.+..+
T Consensus 5 ~k~l~Il~~-~---~~~~~i~~aa~~lG-~~vv~v~~~~~ 39 (425)
T 3vot_A 5 NKNLAIICQ-N---KHLPFIFEEAERLG-LKVTFFYNSAE 39 (425)
T ss_dssp CCEEEEECC-C---TTCCHHHHHHHHTT-CEEEEEEETTS
T ss_pred CcEEEEECC-C---hhHHHHHHHHHHCC-CEEEEEECCCc
Confidence 355777642 2 33446678889999 69999987654
No 168
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=20.22 E-value=77 Score=27.83 Aligned_cols=44 Identities=23% Similarity=0.075 Sum_probs=39.1
Q ss_pred CCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEEe
Q 028146 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY 144 (213)
Q Consensus 101 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~ 144 (213)
++.|.||.|-..=.--|.-+.-.||...|+-|-.+|||-+.++-
T Consensus 208 ~~Vd~VivGAd~V~anG~v~NKiGT~~lAl~Ak~~~vPfyV~a~ 251 (338)
T 3a11_A 208 KMTDKVVMGADSITVNGAVINKIGTALIALTAKEHRVWTMIAAE 251 (338)
T ss_dssp GGCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCEEEEECC
T ss_pred HhCCEEEECccEEecCCCEeecccHHHHHHHHHHcCCCEEEecc
Confidence 57999999998877777777889999999999999999999863
No 169
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=20.19 E-value=93 Score=21.45 Aligned_cols=38 Identities=18% Similarity=0.282 Sum_probs=22.0
Q ss_pred CCcEEEecCCCC-----CcCcccccchhhHHHHHHHHHcCCCEEEEEee
Q 028146 102 VPDLVISGINMG-----SNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (213)
Q Consensus 102 ~PDLVvSGIN~G-----~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~ 145 (213)
+||+||..++.. .-.|.+ +-..+......+|.|.+|..
T Consensus 47 ~~dlvi~d~~~~~~~~~~~~g~~------~~~~l~~~~~~~~ii~ls~~ 89 (140)
T 2qr3_A 47 NPEVVLLDMNFTSGINNGNEGLF------WLHEIKRQYRDLPVVLFTAY 89 (140)
T ss_dssp CEEEEEEETTTTC-----CCHHH------HHHHHHHHCTTCCEEEEEEG
T ss_pred CCCEEEEeCCcCCCCCCCccHHH------HHHHHHhhCcCCCEEEEECC
Confidence 689999988764 222221 12222233457888888864
No 170
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=20.15 E-value=97 Score=27.37 Aligned_cols=43 Identities=21% Similarity=0.081 Sum_probs=38.1
Q ss_pred CCCcEEEecCCCCCcCcccccchhhHHHHHHHHHcCCCEEEEE
Q 028146 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS 143 (213)
Q Consensus 101 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPaIAvS 143 (213)
++.|.||.|-..=.--|.-+.-.||..-|+-|-.+|||-+.+.
T Consensus 226 ~~Vd~VivGAd~V~aNG~v~NKiGT~~lAl~Ak~~~vPfyV~a 268 (347)
T 1t9k_A 226 GLIDAVVVGADRIALNGDTANKIGTYSLAVLAKRNNIPFYVAA 268 (347)
T ss_dssp TCCSEEEECCSEEETTSCEEEETTHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCEEEECccEEecCCCEEecccHHHHHHHHHHcCCCEEEec
Confidence 4699999998877777777788999999999999999999985
No 171
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=20.13 E-value=95 Score=21.73 Aligned_cols=39 Identities=21% Similarity=0.361 Sum_probs=24.1
Q ss_pred CCCcEEEecCCCCC-cCcccccchhhHHHHHHHHHcCCCEEEEEeec
Q 028146 101 SVPDLVISGINMGS-NCGYHVVYSGTVAGAREAFFHGVPSVSISYDW 146 (213)
Q Consensus 101 ~~PDLVvSGIN~G~-N~g~dv~ySGTVgAA~ea~~~GiPaIAvS~~~ 146 (213)
.+||+||..++... -.|.++ +-..++ ...+|.|.+|...
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~-----~~~l~~--~~~~~ii~ls~~~ 88 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQT-----ALAIQQ--ISELPVVFLTAHT 88 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHH-----HHHHHH--HCCCCEEEEESSS
T ss_pred CCCCEEEEeccCCCCCCHHHH-----HHHHHh--CCCCCEEEEECCC
Confidence 47999999998742 223221 112222 2689999999753
No 172
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=20.12 E-value=1.6e+02 Score=23.19 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=26.1
Q ss_pred CCCeEEEecCCCCCCccH-HHHHHHHHhcCCceEEEEecCC
Q 028146 13 HKPTIMVTNDDGIDAPGL-RSLVRVLVSTNRYTVQVCAPDS 52 (213)
Q Consensus 13 ~~~~ILlTNDDGi~s~Gi-~aL~~aL~~~g~~~V~VVAP~~ 52 (213)
+.++||||= .+-|| +++++.|.+.| ++|+++.-..
T Consensus 6 ~~k~vlVTG----as~gIG~~ia~~l~~~G-~~V~~~~r~~ 41 (241)
T 1dhr_A 6 EARRVLVYG----GRGALGSRCVQAFRARN-WWVASIDVVE 41 (241)
T ss_dssp CCCEEEEET----TTSHHHHHHHHHHHTTT-CEEEEEESSC
T ss_pred CCCEEEEEC----CCcHHHHHHHHHHHhCC-CEEEEEeCCh
Confidence 456799993 23466 78899999999 7898887544
No 173
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=20.12 E-value=1.1e+02 Score=21.24 Aligned_cols=39 Identities=18% Similarity=0.167 Sum_probs=22.6
Q ss_pred CCCcEEEecCCCC-CcCcccccchhhHHHHHHH--HHcCCCEEEEEee
Q 028146 101 SVPDLVISGINMG-SNCGYHVVYSGTVAGAREA--FFHGVPSVSISYD 145 (213)
Q Consensus 101 ~~PDLVvSGIN~G-~N~g~dv~ySGTVgAA~ea--~~~GiPaIAvS~~ 145 (213)
.+||+||..++.. .-.|.+ +-..+.. ....+|.|.+|..
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~------~~~~l~~~~~~~~~~ii~ls~~ 90 (140)
T 3lua_A 49 DSITLIIMDIAFPVEKEGLE------VLSAIRNNSRTANTPVIIATKS 90 (140)
T ss_dssp CCCSEEEECSCSSSHHHHHH------HHHHHHHSGGGTTCCEEEEESC
T ss_pred CCCcEEEEeCCCCCCCcHHH------HHHHHHhCcccCCCCEEEEeCC
Confidence 5789999888765 322222 1122222 3467888888753
Done!