BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028157
(213 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana
GN=ASPG1 PE=1 SV=1
Length = 500
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 8 VSIISKTNTSYFSYCL-PSPYGSTAYITFGKPVSVSNKFIKYTPIVTTAEQSEYYDIILT 66
+SI ++ + FSYCL G ++ + F V + P++ + +Y + L+
Sbjct: 293 LSITNQMKATSFSYCLVDRDSGKSSSLDFNS-VQLGGG-DATAPLLRNKKIDTFYYVGLS 350
Query: 67 GISVGGEK--LP---FKISYFTKLSTEIDSGNIITRLPSPVYAALRSAFRKRMKKYKKAK 121
G SVGGEK LP F + +D G +TRL + Y +LR AF K KK
Sbjct: 351 GFSVGGEKVVLPDAIFDVDASGSGGVILDCGTAVTRLQTQAYNSLRDAFLKLTVNLKKGS 410
Query: 122 EFEDLLGTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLV-VASVSQVCLEFAIYPPD 180
L TCYD S+ TV VP +A HF GG L+L + L+ V C FA
Sbjct: 411 SSISLFDTCYDFSSLSTVKVPTVAFHFTGGKSLDLPAKNYLIPVDDSGTFCFAFAPTSSS 470
Query: 181 LNSITLGNVQQRGHEVHYDVGGRRLGFGPGNC 212
L+ I GNVQQ+G + YD+ +G C
Sbjct: 471 LSII--GNVQQQGTRITYDLSKNVIGLSGNKC 500
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana
GN=ASPG2 PE=2 SV=1
Length = 470
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 6 SSVSIISKTNTSYFSYCLPS-PYGSTAYITFGK---PVSVSNKFIKYTPIVTTAEQSEYY 61
S V +S F YCL S ST + FG+ PV S + P+V +Y
Sbjct: 262 SFVGQLSGQTGGAFGYCLVSRGTDSTGSLVFGREALPVGAS-----WVPLVRNPRAPSFY 316
Query: 62 DIILTGISVGGEKLPFKISYFTKLSTE-----IDSGNIITRLPSPVYAALRSAFRKRMKK 116
+ L G+ VGG ++P F T +D+G +TRLP+ Y A R F+ +
Sbjct: 317 YVGLKGLGVGGVRIPLPDGVFDLTETGDGGVVMDTGTAVTRLPTAAYVAFRDGFKSQTAN 376
Query: 117 YKKAKEFEDLLGTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLV-VASVSQVCLEFA 175
+A + TCYDLS + +V VP ++ +F G L L R L+ V C FA
Sbjct: 377 LPRASGVS-IFDTCYDLSGFVSVRVPTVSFYFTEGPVLTLPARNFLMPVDDSGTYCFAFA 435
Query: 176 IYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGPGNC 212
P L+ I GN+QQ G +V +D +GFGP C
Sbjct: 436 ASPTGLSII--GNIQQEGIQVSFDGANGFVGFGPNVC 470
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1
Length = 437
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 19 FSYCL---PSPYGSTAYITFGKPVSVSNKFIKYTPIVTTAEQSEYYDIILTGISVGGEKL 75
FSYCL S T+ I FG VS + TP++ A Q +Y + L ISVG +++
Sbjct: 243 FSYCLVPLTSKKDQTSKINFGTNAIVSGSGVVSTPLIAKASQETFYYLTLKSISVGSKQI 302
Query: 76 PFKISYFTKLSTE--IDSGNIITRLPSPVYAALRSAFRKRMKKYKKAKEFEDLLGTCYDL 133
+ S IDSG +T LP+ Y+ L A + KK ++ + L CY
Sbjct: 303 QYSGSDSESSEGNIIIDSGTTLTLLPTEFYSELEDAVASSIDAEKK-QDPQSGLSLCY-- 359
Query: 134 SAYETVVVPKIAIHFLGGVDLELDVRGTLVVASVSQVCLEFAIYPPDLNSITL-GNVQQR 192
SA + VP I +HF G D++LD V S VC F P S ++ GNV Q
Sbjct: 360 SATGDLKVPVITMHF-DGADVKLDSSNAFVQVSEDLVCFAFRGSP----SFSIYGNVAQM 414
Query: 193 GHEVHYDVGGRRLGFGPGNCS 213
V YD + + F P +C+
Sbjct: 415 NFLVGYDTVSKTVSFKPTDCA 435
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2
PE=1 SV=1
Length = 438
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 14/221 (6%)
Query: 1 MGLDRSSVSIISKTNTSYFSYCLPSPYGSTA--YITFGKPVSVSNKFIKYTPIVTTAEQS 58
+G+ +S+ S+ FSYC+ S YGS++ + G S + T ++ ++
Sbjct: 220 IGMGWGPLSLPSQLGVGQFSYCMTS-YGSSSPSTLALGSAASGVPEGSPSTTLIHSSLNP 278
Query: 59 EYYDIILTGISVGGEKLPFKISYFTKLSTE------IDSGNIITRLPSPVYAALRSAFRK 112
YY I L GI+VGG+ L S F +L + IDSG +T LP Y A+ AF
Sbjct: 279 TYYYITLQGITVGGDNLGIPSSTF-QLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTD 337
Query: 113 RMKKYKKAKEFEDLLGTCYDL-SAYETVVVPKIAIHFLGGVDLELDVRGTLVVASVSQVC 171
++ E L TC+ S TV VP+I++ F GGV L L + L+ + +C
Sbjct: 338 QI-NLPTVDESSSGLSTCFQQPSDGSTVQVPEISMQFDGGV-LNLGEQNILISPAEGVIC 395
Query: 172 LEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGPGNC 212
L L GN+QQ+ +V YD+ + F P C
Sbjct: 396 LAMG-SSSQLGISIFGNIQQQETQVLYDLQNLAVSFVPTQC 435
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1
PE=1 SV=1
Length = 437
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 24/226 (10%)
Query: 1 MGLDRSSVSIISKTNTSYFSYCLPSPYGST--AYITFGKPVSVSNKFIKYTPIVTTAEQS 58
+G+ R +S+ S+ + + FSYC+ +P GS+ + + G S++N +P T + S
Sbjct: 219 VGMGRGPLSLPSQLDVTKFSYCM-TPIGSSTPSNLLLG---SLANSVTAGSPNTTLIQSS 274
Query: 59 E---YYDIILTGISVGGEKLPFKISYFTKLSTE------IDSGNIITRLPSPVYAALRSA 109
+ +Y I L G+SVG +LP S F S IDSG +T + Y ++R
Sbjct: 275 QIPTFYYITLNGLSVGSTRLPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQE 334
Query: 110 FRKRMKK---YKKAKEFEDLLGTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVAS 166
F ++ + F+ T D S + +P +HF GG DLEL + S
Sbjct: 335 FISQINLPVVNGSSSGFDLCFQTPSDPSNLQ---IPTFVMHFDGG-DLELPSENYFISPS 390
Query: 167 VSQVCLEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGPGNC 212
+CL ++ GN+QQ+ V YD G + F C
Sbjct: 391 NGLICLAMGSSSQGMS--IFGNIQQQNMLVVYDTGNSVVSFASAQC 434
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1
Length = 453
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 98/243 (40%), Gaps = 36/243 (14%)
Query: 1 MGLDRSSVSIISKTNTSYFSYCLPSPYGSTAYITFGKPVSVSNKFIKYTPIVTTAEQSEY 60
+G++R S+S IS+ FSYC+ ++ G + YTP++ + Y
Sbjct: 205 LGMNRGSLSFISQMGFPKFSYCISGTDDFPGFLLLGDSNFTWLTPLNYTPLIRISTPLPY 264
Query: 61 YD-----IILTGISVGGEKLPFKISYFTKL-----STEIDSGNIITRLPSPVYAALRSAF 110
+D + LTGI V G+ LP S T +DSG T L PVY ALRS F
Sbjct: 265 FDRVAYTVQLTGIKVNGKLLPIPKSVLVPDHTGAGQTMVDSGTQFTFLLGPVYTALRSHF 324
Query: 111 RKRMKKYKKAKE-----FEDLLGTCYDLSAYETVV-----VPKIAIHFLGGVDLELDVRG 160
R E F+ + CY +S +P +++ F G E+ V G
Sbjct: 325 LNRTNGILTVYEDPDFVFQGTMDLCYRISPVRIRSGILHRLPTVSLVFEGA---EIAVSG 381
Query: 161 T--------LVVASVSQVCLEFAIYPPDL---NSITLGNVQQRGHEVHYDVGGRRLGFGP 209
L V + S C F DL + +G+ Q+ + +D+ R+G P
Sbjct: 382 QPLLYRVPHLTVGNDSVYCFTFG--NSDLMGMEAYVIGHHHQQNMWIEFDLQRSRIGLAP 439
Query: 210 GNC 212
C
Sbjct: 440 VEC 442
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana
GN=At2g35615 PE=3 SV=1
Length = 447
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 26/226 (11%)
Query: 8 VSIISKTNTSY---FSYCLPSPYGST---AYITFGK---PVSVS-NKFIKYTPIVTTAEQ 57
+S+IS+ +S FSYCL +T + I G P S+S + + TP+V E
Sbjct: 225 LSLISQLGSSISKKFSYCLSHKSATTNGTSVINLGTNSIPSSLSKDSGVVSTPLVD-KEP 283
Query: 58 SEYYDIILTGISVGGEKLPFKISYF----------TKLSTEIDSGNIITRLPSPVYAALR 107
YY + L ISVG +K+P+ S + T + IDSG +T L + +
Sbjct: 284 LTYYYLTLEAISVGKKKIPYTGSSYNPNDDGILSETSGNIIIDSGTTLTLLEAGFFDKFS 343
Query: 108 SAFRKRMKKYKKAKEFEDLLGTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVASV 167
SA + + K+ + + LL C+ + E + +P+I +HF G D+ L V S
Sbjct: 344 SAVEESVTGAKRVSDPQGLLSHCFKSGSAE-IGLPEITVHFT-GADVRLSPINAFVKLSE 401
Query: 168 SQVCLEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGPGNCS 213
VCL P GN Q V YD+ R + F +CS
Sbjct: 402 DMVCLSMV---PTTEVAIYGNFAQMDFLVGYDLETRTVSFQHMDCS 444
>sp|Q9Y5Z0|BACE2_HUMAN Beta-secretase 2 OS=Homo sapiens GN=BACE2 PE=1 SV=1
Length = 518
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 24/182 (13%)
Query: 46 IKYTPIVTTAEQSEYYDIILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAA 105
I YTPI ++ YY I + + +GG+ L + +DSG + RLP V+ A
Sbjct: 263 IWYTPI----KEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDA 318
Query: 106 LRSAFRKRMKKYKKAKEFEDLLGT-----CYDLSAYETVVVPKIAIHFLGGVDLELDVRG 160
+ A + + EF D T C+ S PKI+I +L + R
Sbjct: 319 VVEA----VARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISI-YLRDENSSRSFRI 373
Query: 161 T---------LVVASVSQVCLEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGPGN 211
T ++ A ++ C F I P N++ +G G V +D +R+GF
Sbjct: 374 TILPQLYIQPMMGAGLNYECYRFGIS-PSTNALVIGATVMEGFYVIFDRAQKRVGFAASP 432
Query: 212 CS 213
C+
Sbjct: 433 CA 434
>sp|Q9JL18|BACE2_MOUSE Beta-secretase 2 OS=Mus musculus GN=Bace2 PE=2 SV=1
Length = 514
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 73/182 (40%), Gaps = 24/182 (13%)
Query: 46 IKYTPIVTTAEQSEYYDIILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAA 105
I YTPI ++ YY I + + +GG+ L + +DSG + RLP V+ A
Sbjct: 259 IWYTPI----KEEWYYQIEILKLEIGGQNLNLDCREYNADKAIVDSGTTLLRLPQKVFDA 314
Query: 106 LRSAFRKRMKKYKKAKEFEDLLGT-----CYDLSAYETVVVPKIAIHFLGGVDLELDVRG 160
+ A + + EF D T C+ S PKI+I +L + R
Sbjct: 315 VVEA----VARTSLIPEFSDGFWTGAQLACWTNSETPWAYFPKISI-YLRDENASRSFRI 369
Query: 161 T---------LVVASVSQVCLEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGPGN 211
T ++ A + C F I N++ +G G V +D RR+GF
Sbjct: 370 TILPQLYIQPMMGAGFNYECYRFGI-SSSTNALVIGATVMEGFYVVFDRAQRRVGFAVSP 428
Query: 212 CS 213
C+
Sbjct: 429 CA 430
>sp|Q6IE75|BACE2_RAT Beta-secretase 2 OS=Rattus norvegicus GN=Bace2 PE=2 SV=1
Length = 514
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 73/182 (40%), Gaps = 24/182 (13%)
Query: 46 IKYTPIVTTAEQSEYYDIILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAA 105
I YTPI ++ YY I + + +GG+ L + +DSG + RLP V+ A
Sbjct: 259 IWYTPI----KEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDA 314
Query: 106 LRSAFRKRMKKYKKAKEFEDLLGT-----CYDLSAYETVVVPKIAIHFLGGVDLELDVRG 160
+ A + + EF D T C+ S PKI+I +L + R
Sbjct: 315 VVEA----VARTSLIPEFSDGFWTGAQLACWTNSETPWAYFPKISI-YLRDENASRSFRI 369
Query: 161 T---------LVVASVSQVCLEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGPGN 211
T ++ A + C F I N++ +G G V +D RR+GF
Sbjct: 370 TILPQLYIQPMMGAGFNYECYRFGI-SSSTNALVIGATVMEGFYVVFDRAQRRVGFAVSP 428
Query: 212 CS 213
C+
Sbjct: 429 CA 430
>sp|Q1KLR6|BACE1_CAVPO Beta-secretase 1 OS=Cavia porcellus GN=BACE1 PE=2 SV=1
Length = 473
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 46 IKYTPIVTTAEQSEYYDIILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAA 105
+ YTPI + YY++I+ + + G+ L + + +DSG RLP V+
Sbjct: 221 LWYTPI----RREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVF-- 274
Query: 106 LRSAFRKRMKKYKKAKEFED--LLG---TCYDLSAYETVVVPKIAIHFLGGVDLELDVRG 160
A K +K ++F D LG C+ + P I+++ +G V + R
Sbjct: 275 --EAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQ-SFRI 331
Query: 161 TLV----------VASVSQVCLEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGPG 210
T++ VA+ C +FAI ++ +G V G V +D +R+GF
Sbjct: 332 TILPQQYLRPVEDVATSQDDCYKFAISQSSTGTV-MGAVIMEGFYVVFDRARKRIGFAVS 390
Query: 211 NC 212
C
Sbjct: 391 AC 392
>sp|Q2HJ40|BACE1_BOVIN Beta-secretase 1 OS=Bos taurus GN=BACE1 PE=2 SV=1
Length = 501
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 46 IKYTPIVTTAEQSEYYDIILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAA 105
+ YTPI + YY++I+ + + G+ L + + +DSG RLP V+
Sbjct: 249 LWYTPI----RREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVF-- 302
Query: 106 LRSAFRKRMKKYKKAKEFED--LLG---TCYDLSAYETVVVPKIAIHFLGGVDLELDVRG 160
A K +K ++F D LG C+ + P I+++ +G V + R
Sbjct: 303 --EAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQ-SFRI 359
Query: 161 TLV----------VASVSQVCLEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGPG 210
T++ VA+ C +FAI ++ +G V G V +D +R+GF
Sbjct: 360 TILPQQYLRPVEDVATSQDDCYKFAISQSSTGTV-MGAVIMEGFYVVFDRARKRIGFAVS 418
Query: 211 NC 212
C
Sbjct: 419 AC 420
>sp|P56817|BACE1_HUMAN Beta-secretase 1 OS=Homo sapiens GN=BACE1 PE=1 SV=2
Length = 501
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 46 IKYTPIVTTAEQSEYYDIILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAA 105
+ YTPI + YY++I+ + + G+ L + + +DSG RLP V+
Sbjct: 249 LWYTPI----RREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVF-- 302
Query: 106 LRSAFRKRMKKYKKAKEFED--LLG---TCYDLSAYETVVVPKIAIHFLGGVDLELDVRG 160
A K +K ++F D LG C+ + P I+++ +G V + R
Sbjct: 303 --EAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQ-SFRI 359
Query: 161 TLV----------VASVSQVCLEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGPG 210
T++ VA+ C +FAI ++ +G V G V +D +R+GF
Sbjct: 360 TILPQQYLRPVEDVATSQDDCYKFAISQSSTGTV-MGAVIMEGFYVVFDRARKRIGFAVS 418
Query: 211 NC 212
C
Sbjct: 419 AC 420
>sp|P56819|BACE1_RAT Beta-secretase 1 OS=Rattus norvegicus GN=Bace1 PE=2 SV=1
Length = 501
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 46 IKYTPIVTTAEQSEYYDIILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAA 105
+ YTPI + YY++I+ + + G+ L + + +DSG RLP V+
Sbjct: 249 LWYTPI----RREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVF-- 302
Query: 106 LRSAFRKRMKKYKKAKEFED--LLG---TCYDLSAYETVVVPKIAIHFLGGVDLELDVRG 160
A K +K ++F D LG C+ + P I+++ +G V + R
Sbjct: 303 --EAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQ-SFRI 359
Query: 161 TLV----------VASVSQVCLEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGPG 210
T++ VA+ C +FA+ ++ +G V G V +D +R+GF
Sbjct: 360 TILPQQYLRPVEDVATSQDDCYKFAVSQSSTGTV-MGAVIMEGFYVVFDRARKRIGFAVS 418
Query: 211 NC 212
C
Sbjct: 419 AC 420
>sp|P56818|BACE1_MOUSE Beta-secretase 1 OS=Mus musculus GN=Bace1 PE=1 SV=2
Length = 501
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 46 IKYTPIVTTAEQSEYYDIILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAA 105
+ YTPI + YY++I+ + + G+ L + + +DSG RLP V+
Sbjct: 249 LWYTPI----RREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVF-- 302
Query: 106 LRSAFRKRMKKYKKAKEFED--LLG---TCYDLSAYETVVVPKIAIHFLGGVDLELDVRG 160
A K +K ++F D LG C+ + P I+++ +G V + R
Sbjct: 303 --EAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQ-SFRI 359
Query: 161 TLV----------VASVSQVCLEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGPG 210
T++ VA+ C +FA+ ++ +G V G V +D +R+GF
Sbjct: 360 TILPQQYLRPVEDVATSQDDCYKFAVSQSSTGTV-MGAVIMEGFYVVFDRARKRIGFAVS 418
Query: 211 NC 212
C
Sbjct: 419 AC 420
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana
GN=At1g65240 PE=1 SV=2
Length = 475
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 89/224 (39%), Gaps = 23/224 (10%)
Query: 1 MGLDRSSVSIISKTNTS-----YFSYCLPSPYGSTAYITFGKPVSVSNKFIKYTPIVTTA 55
MG +S+ S++S+ + FS+CL + G F V S K +K TP+V
Sbjct: 216 MGFGQSNTSVLSQLAATGDAKRVFSHCLDNVKGGG---IFAVGVVDSPK-VKTTPMV--- 268
Query: 56 EQSEYYDIILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAALRSAF--RKR 113
+Y+++L G+ V G L S T +DSG + P +Y +L R+
Sbjct: 269 PNQMHYNVMLMGMDVDGTSLDLPRSIVRNGGTIVDSGTTLAYFPKVLYDSLIETILARQP 328
Query: 114 MKKYKKAKEFEDLLGTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVASVSQVCLE 173
+K + + F+ C+ S P ++ F V L + L C
Sbjct: 329 VKLHIVEETFQ-----CFSFSTNVDEAFPPVSFEFEDSVKLTVYPHDYLFTLEEELYCFG 383
Query: 174 FAI--YPPDLNS--ITLGNVQQRGHEVHYDVGGRRLGFGPGNCS 213
+ D S I LG++ V YD+ +G+ NCS
Sbjct: 384 WQAGGLTTDERSEVILLGDLVLSNKLVVYDLDNEVIGWADHNCS 427
>sp|O60020|ASPR1_PHARH Aspartic protease OS=Phaffia rhodozyma GN=pr1 PE=1 SV=1
Length = 405
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 73/169 (43%), Gaps = 29/169 (17%)
Query: 46 IKYTPIVTTAEQSEYYDIILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAA 105
I YTP+ Q Y+ I L G+SV G + +S S ID+G + P+ AA
Sbjct: 255 ITYTPVT----QKAYWTIALGGVSVNGAAINPSVS-----SAIIDTGTTLVYGPTAGVAA 305
Query: 106 LRSAFRKRMKKYKKAKEFEDLLGTCYDLSAYETV---VVPKIAIHFLGGVDLELDVR--- 159
L + K + D G+ D Y T VP +A+ F GG +
Sbjct: 306 LYA-------KIPGSASMADTYGS--DYQGYYTFPCSAVPTVALTF-GGSSFSVPTSAFN 355
Query: 160 -GTLVVASVSQVCLEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGF 207
GT V+S S+ C+ + D S +G+V +G YDVG R+GF
Sbjct: 356 LGT--VSSGSKQCVGGIVGQGD-GSWLVGDVFLQGVYSIYDVGNARVGF 401
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana
GN=At5g10080 PE=1 SV=1
Length = 528
Score = 37.4 bits (85), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 10/134 (7%)
Query: 83 TKLSTEIDSGNIITRLPSPVYAALRSAFRKRMKKYKKAKEFEDLLGTCYDLSAYETVVVP 142
T +T IDSG T LP +Y + + + +K FE G ++ YE+ P
Sbjct: 326 TSFTTFIDSGQSFTYLPEEIYRKVALEIDRHIN--ATSKNFE---GVSWEY-CYESSAEP 379
Query: 143 KI-AIHFLGGVDLELDVRGTLVVASVSQVCLEFA--IYPPDLNSI-TLGNVQQRGHEVHY 198
K+ AI + + L V SQ ++F I P I ++G RG+ + +
Sbjct: 380 KVPAIKLKFSHNNTFVIHKPLFVFQQSQGLVQFCLPISPSGQEGIGSIGQNYMRGYRMVF 439
Query: 199 DVGGRRLGFGPGNC 212
D +LG+ P C
Sbjct: 440 DRENMKLGWSPSKC 453
>sp|P69477|NEP2_NEPDI Aspartic proteinase nepenthesin-2 (Fragments) OS=Nepenthes
distillatoria PE=1 SV=1
Length = 178
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 72 GEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAALRSAFRKRMKKYKKAKEFEDLLGTCY 131
G +P I++ + +IDSG +T LP Y A+ AF ++ E L TC+
Sbjct: 81 GSSVP-NIAFGCGDNLQIDSGTTLTYLPQDAYNAVAQAFTDQI-NLPTVDESSSGLSTCF 138
Query: 132 -DLSAYETVVVPKIAIHFLGGV 152
+ S TV VP+I++ GGV
Sbjct: 139 QEPSDGSTVQVPEISMQ-DGGV 159
>sp|O46512|CP19A_HORSE Cytochrome P450 19A1 OS=Equus caballus GN=CYP19A1 PE=2 SV=1
Length = 503
Score = 34.3 bits (77), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 115 KKYKKAKEFEDLLGTCYDLSAYETVVVPKIAIHFLGGVDLEL-DVRGTLVVASVSQVCLE 173
K K KE D +G + + K+ H DL L + RG L +V+Q LE
Sbjct: 243 KHQKSIKELRDAVGILAEEKRHRIFTAEKLEDHVDFATDLILAEKRGELTKENVNQCILE 302
Query: 174 FAIYPPDLNSITL 186
I PD S+T+
Sbjct: 303 MMIAAPDTLSVTV 315
>sp|P34472|CL161_CAEEL C-type lectin domain-containing protein 161 OS=Caenorhabditis
elegans GN=clec-161 PE=4 SV=3
Length = 862
Score = 33.9 bits (76), Expect = 0.86, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 18/76 (23%)
Query: 55 AEQSEYYDIILTGISVG--------GEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAAL 106
A +S YY + + +S+G G+KLPF + F S E P+PV+ A+
Sbjct: 121 APESRYYGVAIDKMSIGGLWHTVPVGQKLPF-VCTFQGKSNEAG--------PAPVH-AM 170
Query: 107 RSAFRKRMKKYKKAKE 122
R+ +KR+ K +K +E
Sbjct: 171 RAPAKKRVPKVEKPEE 186
>sp|Q4WFS2|Y1220_ASPFU Probable aspartic-type endopeptidase AFUA_3G01220 OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=AFUA_3G01220 PE=3 SV=2
Length = 439
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 29 STAYITFGK--PVSVSNKFIKYTPIVTT-----AEQSEYYDIILTGISVGGEKLPFKISY 81
+ Y+T G PV ++ F TPI+ T + ++Y + + G+++G LP
Sbjct: 259 AAGYLTLGGLPPVDINGNF-STTPILITNIKGYPKDYDFYAVNIDGVALGNRSLPEAAGG 317
Query: 82 FTKLSTEIDSGNIITRLPSPVYAALRSAF 110
+ IDSG + P+PV ++ +AF
Sbjct: 318 IQYI---IDSGTTLNYYPTPVADSVNAAF 343
>sp|P00799|CARP_RHIMI Mucorpepsin OS=Rhizomucor miehei PE=1 SV=1
Length = 430
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 65/164 (39%), Gaps = 6/164 (3%)
Query: 46 IKYTPIVTTAEQSEYYDIILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAA 105
I YT +++ ++D +TGI+V G + + + ID+G +PS +A
Sbjct: 265 IAYTDVMSRYGGYYFWDAPVTGITVDGSA---AVRFSRPQAFTIDTGTNFFIMPS---SA 318
Query: 106 LRSAFRKRMKKYKKAKEFEDLLGTCYDLSAYETVVVPKIAIHFLGGVDLELDVRGTLVVA 165
+ + + ++ + Y S +V + + +++ + V L+
Sbjct: 319 ASKIVKAALPDATETQQGWVVPCASYQNSKSTISIVMQKSGSSSDTIEISVPVSKMLLPV 378
Query: 166 SVSQVCLEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGP 209
S F I P N +GN+ R YD G R+GF P
Sbjct: 379 DQSNETCMFIILPDGGNQYIVGNLFLRFFVNVYDFGNNRIGFAP 422
>sp|P12543|TBA_PLAYO Tubulin alpha chain OS=Plasmodium yoelii yoelii GN=PY01155 PE=2
SV=2
Length = 453
Score = 31.6 bits (70), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 32/147 (21%)
Query: 3 LDRSSVSIISKTNTSYFSYCLPSPYGSTAYITFGKPVSVSNKFIKYTPIVTTAEQSEYYD 62
L+R SV K+ ++ C PSP STA + V ++ +++T + + YD
Sbjct: 154 LERLSVDYGKKSKLNFC--CWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAIMLDNEAIYD 211
Query: 63 IILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAALRSAFRKRMKKYKKAKE 122
I + L + +T L+ RL + V ++L ++ R
Sbjct: 212 IC-------KKNLDIERPTYTNLN----------RLIAQVISSLTASLR----------- 243
Query: 123 FEDLLGTCYDLSAYETVVVPKIAIHFL 149
F+ L D++ ++T +VP IHF+
Sbjct: 244 FDGALNV--DVTEFQTNLVPYPRIHFM 268
>sp|P14642|TBA_PLAFK Tubulin alpha chain OS=Plasmodium falciparum (isolate K1 /
Thailand) PE=3 SV=1
Length = 453
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 32/147 (21%)
Query: 3 LDRSSVSIISKTNTSYFSYCLPSPYGSTAYITFGKPVSVSNKFIKYTPIVTTAEQSEYYD 62
L+R SV K+ ++ C PSP STA + V ++ +++T + + YD
Sbjct: 154 LERLSVDYGKKSKLNFC--CWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAIMLDNEAIYD 211
Query: 63 IILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAALRSAFRKRMKKYKKAKE 122
I + + + +T L+ RL + V ++L ++ R
Sbjct: 212 ICRRNLDI-------ERPTYTNLN----------RLIAQVISSLTASLR----------- 243
Query: 123 FEDLLGTCYDLSAYETVVVPKIAIHFL 149
F+ L D++ ++T +VP IHF+
Sbjct: 244 FDGALNV--DVTEFQTNLVPYPRIHFM 268
>sp|P09177|CARP_RHIPU Mucorpepsin OS=Rhizomucor pusillus PE=1 SV=2
Length = 427
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 18/170 (10%)
Query: 46 IKYTPIVTTAEQSEYYDIILTGISVGGEKLPFKISYFTKLSTEIDSGNIITRLPSPVYAA 105
I+YT ++ + ++D +TG+ + G +S+ + ID+G PS
Sbjct: 262 IQYTDVLKSRGGYFFWDAPVTGVKIDGAD---AVSFDGAQAFTIDTGTNFFIAPS----- 313
Query: 106 LRSAFRKRMKKYKKAKEFEDLLGTCYDLSAYE-TVVVPKIAIHFLGGVDLELDV-----R 159
+F +++ K E G S Y+ + + + G +DV +
Sbjct: 314 ---SFAEKVVKAALPDATESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDVSVPISK 370
Query: 160 GTLVVASVSQVCLEFAIYPPDLNSITLGNVQQRGHEVHYDVGGRRLGFGP 209
L V + C+ F + P N +GN+ R YD G R+GF P
Sbjct: 371 MLLPVDKSGETCM-FIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAP 419
>sp|O28033|Y2251_ARCFU Protein AF_2251 OS=Archaeoglobus fulgidus (strain ATCC 49558 /
VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2251
PE=3 SV=1
Length = 229
Score = 30.4 bits (67), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 36 GKPVSVSNKFIKYTPIVTTAEQSEYYDIILTGISVGGEKLPFKISYFTKLSTEI-DSGNI 94
G P + N F K I+ E+ EY++ + + V G F++ KL+ + D+ ++
Sbjct: 142 GVPAEMENTFEK---ILERFEKGEYHEEV---VKVNG----FEVKIVDKLNQVVRDNPDV 191
Query: 95 -ITRLPSPVYAALRSAFRKRMKKYKKAKEFEDLLG 128
I P P Y ++ + R + K K K+FE+LL
Sbjct: 192 EIGSYPKPGYVMVKFSGRDKEKVKKAVKQFEELLN 226
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,635,077
Number of Sequences: 539616
Number of extensions: 3110238
Number of successful extensions: 7948
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 7905
Number of HSP's gapped (non-prelim): 61
length of query: 213
length of database: 191,569,459
effective HSP length: 113
effective length of query: 100
effective length of database: 130,592,851
effective search space: 13059285100
effective search space used: 13059285100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)