BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028163
(212 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L1Z7|GPMA_BARHE 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Bartonella henselae (strain ATCC 49882 / Houston 1)
GN=gpmA PE=3 SV=1
Length = 206
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+GR A G++L+ G D +
Sbjct: 3 RTLVLIRHGQSEWNLKNLFTG-----WKDPGLTEKGRTEAIAAGKKLKET-GLKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSALCSVD 97
S R +TA ++ + D
Sbjct: 57 SALQRAQKTAQNILEQMEQSD 77
>sp|P44164|SIXA_HAEIN Phosphohistidine phosphatase SixA homolog OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=sixA-A PE=3 SV=1
Length = 164
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 19 NVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGF----PIDRV 74
N+ +MRHG+ E + S AR H+ G +AF G+ L+ +L +DR+
Sbjct: 2 NIFIMRHGEA----EVMANSDKAR----HLTVYGSKQAFLQGQWLKQHLSTLVINSLDRI 53
Query: 75 FVSPFLRCIQTAYEVVSAL 93
VSP++R +T ++V A
Sbjct: 54 LVSPYVRAQETFHQVNQAF 72
>sp|P76502|SIXA_ECOLI Phosphohistidine phosphatase SixA OS=Escherichia coli (strain
K12) GN=sixA PE=1 SV=1
Length = 161
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 20 VIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRA-FCTGRRLRANLGFPIDRVFVSP 78
V +MRHGD A + S + RP + +E R+ A + G+++ I+RV VSP
Sbjct: 3 VFIMRHGDAALDA----ASDSVRPLTTNGCDESRLMANWLKGQKVE------IERVLVSP 52
Query: 79 FLRCIQTAYEV 89
FLR QT EV
Sbjct: 53 FLRAEQTLEEV 63
>sp|B4L6S9|PGAM5_DROMO Serine/threonine-protein phosphatase Pgam5, mitochondrial
OS=Drosophila mojavensis GN=Pgam5 PE=3 SV=1
Length = 289
Score = 38.5 bits (88), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 10 QSNDKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGF 69
+ N ++ +++I++RHG+ D E H+ + GR++A TG+RL LG
Sbjct: 79 EKNVSKYARHIILIRHGEYLDVGETDETH--------HLTDRGRLQAKYTGKRLH-ELGI 129
Query: 70 PIDRVFVSPFLRCIQTAYEVVSALCSVDDDPTVMSS 105
D+V S +R +TA E++ L +D D T + S
Sbjct: 130 KWDKVIASNMVRAQETA-EII--LNEIDFDKTKVKS 162
>sp|Q6FZ12|GPMA_BARQU 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Bartonella quintana (strain Toulouse) GN=gpmA PE=3
SV=1
Length = 206
Score = 37.7 bits (86), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 18/119 (15%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+G A G+ L+A G D +
Sbjct: 3 RTLVLIRHGQSEWNIKNLFTG-----WKDPGLTEKGHAEAITAGKNLKA-AGLKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRH 135
S R +TA ++ + D ++ + A+ D YG LN++ +R
Sbjct: 57 SALQRAQKTAQHILEQMG--QSDLPLIKNSALNERD---------YGDLSGLNKDEVRQ 104
>sp|C5BEL3|GPMA_EDWI9 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Edwardsiella ictaluri (strain 93-146) GN=gpmA PE=3
SV=1
Length = 250
Score = 37.7 bits (86), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 19 NVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSP 78
++++RHG+ N E + D + E+GR A GR L+A GF D + S
Sbjct: 5 KLVLLRHGESEWNRENRFTGWT----DVELSEKGRQEALAAGRLLKAQ-GFSFDIAYTSV 59
Query: 79 FLRCIQTAYEVVSAL 93
R I T + V+ L
Sbjct: 60 LKRAIHTLWHVLDKL 74
>sp|A1UTM4|GPMA_BARBK 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Bartonella bacilliformis (strain ATCC 35685 / KC583)
GN=gpmA PE=3 SV=1
Length = 206
Score = 37.4 bits (85), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+GR A G+ L+ G D +
Sbjct: 3 RTLVLVRHGQSEWNIKNLFTG-----WKDPDLTEKGRTEAITAGKNLK-KAGLKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSALCSVD 97
S R +TA ++ + D
Sbjct: 57 SALQRAQKTAQHILEQMAQPD 77
>sp|P07738|PMGE_HUMAN Bisphosphoglycerate mutase OS=Homo sapiens GN=BPGM PE=1 SV=2
Length = 259
Score = 37.4 bits (85), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 20 VIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPF 79
+I++RHG+ A N E + S D + EG A G++L+A L F D VF S
Sbjct: 6 LIMLRHGEGAWNKENRFCSWV----DQKLNSEGMEEARNCGKQLKA-LNFEFDLVFTSVL 60
Query: 80 LRCIQTAYEVVSAL 93
R I TA+ ++ L
Sbjct: 61 NRSIHTAWLILEEL 74
>sp|Q4R6L7|PMGE_MACFA Bisphosphoglycerate mutase OS=Macaca fascicularis GN=BPGM PE=2
SV=3
Length = 259
Score = 37.4 bits (85), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 20 VIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPF 79
+I++RHG+ A N E + S D + EG A G++L+A L F D VF S
Sbjct: 6 LIMLRHGEGAWNKENRFCSWV----DQKLNSEGMEEARNCGKQLKA-LNFEFDLVFTSVL 60
Query: 80 LRCIQTAYEVVSAL 93
R I TA+ ++ L
Sbjct: 61 NRSIHTAWLILEEL 74
>sp|Q4L8T0|GPMA_STAHJ 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=gpmA PE=3 SV=1
Length = 228
Score = 37.4 bits (85), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 20 VIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPF 79
+I+ RHG N + L+ D + E+GR A +GR+L+ N G ID F S
Sbjct: 4 LILCRHGQSEWNAKNLFTGWE----DVQLSEQGRNEAITSGRKLKEN-GIEIDVAFTSLL 58
Query: 80 LRCIQTA 86
R ++T
Sbjct: 59 TRALETT 65
>sp|A9IXE7|GPMA_BART1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
GN=gpmA PE=3 SV=1
Length = 206
Score = 37.0 bits (84), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+G A G++L+ G D +
Sbjct: 3 RTLVLIRHGQSEWNLKNLFTG-----WKDPDLTEKGHAEAIAAGKKLKET-GVKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSALCSVD 97
S R +TA ++ + D
Sbjct: 57 SALQRAQKTAQHILEQMGQSD 77
>sp|P07952|PMGE_RABIT Bisphosphoglycerate mutase OS=Oryctolagus cuniculus GN=BPGM PE=2
SV=2
Length = 259
Score = 37.0 bits (84), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 20 VIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPF 79
+I++RHG+ A N E + S D + EG A G++L+A L F D VF S
Sbjct: 6 LIMLRHGEGAWNKENRFCSWV----DQKLNSEGMEEARNCGKQLKA-LNFEFDLVFTSVL 60
Query: 80 LRCIQTAYEVVSAL 93
R I TA+ ++ L
Sbjct: 61 NRSIHTAWLILEEL 74
>sp|B3MR30|PGAM5_DROAN Serine/threonine-protein phosphatase Pgam5, mitochondrial
OS=Drosophila ananassae GN=Pgam5 PE=3 SV=1
Length = 289
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVS 77
+++I++RHG+ D E S A H+ E GR +A TG+RL + LG D+V S
Sbjct: 87 RHIILVRHGEYLDVGE----SDATH----HLTERGRKQAQFTGQRL-SELGIQWDKVIAS 137
Query: 78 PFLRCIQTA 86
+R +TA
Sbjct: 138 TMVRAQETA 146
>sp|A6WYJ2|GPMA_OCHA4 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882
/ NCTC 12168) GN=gpmA PE=3 SV=1
Length = 206
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+G A G+RL+A G D +
Sbjct: 3 RTLVLVRHGQSEWNLKNLFTG-----WRDPGLTEQGHAEAKAAGQRLKA-AGLKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSALCSVD 97
S R T ++ L D
Sbjct: 57 SALSRAQVTCQHILDQLGQSD 77
>sp|Q3SW71|GPMA_NITWN 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC
25391) GN=gpmA PE=3 SV=1
Length = 207
Score = 35.0 bits (79), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 20 VIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSP 78
++++RHG N + L+ W DP + E G A GR+L+A GF D F S
Sbjct: 6 LVLVRHGQSEWNLKNLFTG-----WKDPDLTELGAAEAKDAGRKLKAQ-GFVFDIAFTST 59
Query: 79 FLRCIQTAYEVVSAL 93
+R T V+ L
Sbjct: 60 LIRAQHTLDLVLKEL 74
>sp|B0UBD4|GPMA_METS4 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Methylobacterium sp. (strain 4-46) GN=gpmA PE=3 SV=1
Length = 208
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 20 VIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSP 78
+++ RHG N + L+ W DP + E G A GRRL+A G D F S
Sbjct: 5 LVLARHGQSEWNLKNLFTG-----WRDPDLTEVGIAEARAAGRRLKAK-GIRFDICFTSA 58
Query: 79 FLRCIQTAYEVVSALCSVD 97
R +TA ++ L D
Sbjct: 59 LTRAQRTAALILEELGQPD 77
>sp|Q492W5|GPMA_BLOPB 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Blochmannia pennsylvanicus (strain BPEN) GN=gpmA
PE=3 SV=1
Length = 232
Score = 34.7 bits (78), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 20 VIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPF 79
++++RHG+ N E + D + E+GR A C GR L+ N GF + + S
Sbjct: 6 LVLIRHGESQWNKENRFTGWV----DVDLSEKGRSEAQCAGRILKKN-GFFFNYGYTSVL 60
Query: 80 LRCIQTAYEVVSAL 93
R I T + ++ L
Sbjct: 61 KRAIHTLWIILDQL 74
>sp|Q5FQZ9|PURA_GLUOX Adenylosuccinate synthetase OS=Gluconobacter oxydans (strain 621H)
GN=purA PE=3 SV=1
Length = 429
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 150 ELEALLPAGTVDSSVKQVYDQLPQWEETVAGAR---ERYAQVIK 190
++E A + VK VY+ +P W+ET AGAR E AQ IK
Sbjct: 352 KIETFPSAPGAQTRVKPVYETMPGWKETTAGARSWAELPAQAIK 395
>sp|P59160|GPMA_BRUSU 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Brucella suis biovar 1 (strain 1330) GN=gpmA PE=3
SV=1
Length = 206
Score = 33.9 bits (76), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+G A G+RL+A G D +
Sbjct: 3 RTLVLVRHGQSEWNLKNLFTG-----WRDPGLTEQGHAEAKAAGQRLKAA-GLKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSAL 93
S R T ++ L
Sbjct: 57 SALSRAQVTCQHILDEL 73
>sp|A9WW62|GPMA_BRUSI 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
GN=gpmA PE=3 SV=1
Length = 206
Score = 33.9 bits (76), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+G A G+RL+A G D +
Sbjct: 3 RTLVLVRHGQSEWNLKNLFTG-----WRDPGLTEQGHAEAKAAGQRLKAA-GLKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSAL 93
S R T ++ L
Sbjct: 57 SALSRAQVTCQHILDEL 73
>sp|A9MCX8|GPMA_BRUC2 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=gpmA PE=3 SV=1
Length = 206
Score = 33.9 bits (76), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+G A G+RL+A G D +
Sbjct: 3 RTLVLVRHGQSEWNLKNLFTG-----WRDPGLTEQGHAEAKAAGQRLKAA-GLKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSAL 93
S R T ++ L
Sbjct: 57 SALSRAQVTCQHILDEL 73
>sp|Q576R3|GPMA_BRUAB 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Brucella abortus biovar 1 (strain 9-941) GN=gpmA
PE=3 SV=1
Length = 206
Score = 33.9 bits (76), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+G A G+RL+A G D +
Sbjct: 3 RTLVLVRHGQSEWNLKNLFTG-----WRDPGLTEQGHAEAKAAGQRLKAA-GLKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSAL 93
S R T ++ L
Sbjct: 57 SALSRAQVTCQHILDEL 73
>sp|Q2YJN6|GPMA_BRUA2 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Brucella abortus (strain 2308) GN=gpmA PE=3 SV=1
Length = 206
Score = 33.9 bits (76), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+G A G+RL+A G D +
Sbjct: 3 RTLVLVRHGQSEWNLKNLFTG-----WRDPGLTEQGHAEAKAAGQRLKAA-GLKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSAL 93
S R T ++ L
Sbjct: 57 SALSRAQVTCQHILDEL 73
>sp|B2SC37|GPMA_BRUA1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Brucella abortus (strain S19) GN=gpmA PE=3 SV=1
Length = 206
Score = 33.9 bits (76), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+G A G+RL+A G D +
Sbjct: 3 RTLVLVRHGQSEWNLKNLFTG-----WRDPGLTEQGHAEAKAAGQRLKAA-GLKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSAL 93
S R T ++ L
Sbjct: 57 SALSRAQVTCQHILDEL 73
>sp|A5VVV5|GPMA_BRUO2 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC
10512) GN=gpmA PE=3 SV=1
Length = 206
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+G A G+RL+A G D +
Sbjct: 3 RTLVLVRHGQSEWNLKNLFTG-----WRDPGLTEQGHAEAKAAGQRLKAA-GLKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSAL 93
S R T ++ L
Sbjct: 57 SALSRAQVTCQHILDEL 73
>sp|Q8YDC9|GPMA_BRUME 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=gpmA PE=3 SV=2
Length = 206
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+G A G+RL+A G D +
Sbjct: 3 RTLVLVRHGQSEWNLKNLFTG-----WRDPGLTEQGHAEAKAAGQRLKAA-GLKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSAL 93
S R T ++ L
Sbjct: 57 SALSRAQVTCQHILDEL 73
>sp|C0RMJ1|GPMA_BRUMB 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Brucella melitensis biotype 2 (strain ATCC 23457)
GN=gpmA PE=3 SV=1
Length = 206
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFV 76
+ ++++RHG N + L+ W DP + E+G A G+RL+A G D +
Sbjct: 3 RTLVLVRHGQSEWNLKNLFTG-----WRDPGLTEQGHAEAKAAGQRLKAA-GLKFDIAYT 56
Query: 77 SPFLRCIQTAYEVVSAL 93
S R T ++ L
Sbjct: 57 SALSRAQVTCQHILDEL 73
>sp|B4M7S0|PGAM5_DROVI Serine/threonine-protein phosphatase Pgam5, mitochondrial
OS=Drosophila virilis GN=Pgam5 PE=3 SV=1
Length = 289
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVS 77
+++I++RHG+ D H+ + GR++A TG+RLR LG D+V S
Sbjct: 87 RHIILIRHGEYLD--------VGDSDDTHHLTDRGRLQAKYTGQRLR-ELGIKWDKVIAS 137
Query: 78 PFLRCIQTA 86
+R +TA
Sbjct: 138 NMVRAQETA 146
>sp|A5EGB0|GLNE_BRASB Glutamate-ammonia-ligase adenylyltransferase OS=Bradyrhizobium sp.
(strain BTAi1 / ATCC BAA-1182) GN=glnE PE=3 SV=1
Length = 985
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 76 VSPFLRCIQTAYEVVSALCSVDDD-PTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIR 134
V LR +++ ++ ALC + P + + A+ + S V++++ Y +L +EA+R
Sbjct: 115 VMRLLRQLKSEAALLIALCDIGGVWPVMQVTAALTDVAVSAVQMALRY----LLRQEAVR 170
Query: 135 HNMAPKDGD 143
+AP+D D
Sbjct: 171 GRLAPRDAD 179
>sp|A5E8K1|GPMA_BRASB 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
GN=gpmA PE=3 SV=1
Length = 207
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 20 VIVMRHGDRADNFEPLWVSTAARPW-DPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSP 78
++++RHG N + L+ W DP + E+G A GR+L+A+ G D F S
Sbjct: 6 LVLVRHGQSEWNLKNLFTG-----WKDPDLTEQGVSEAKEAGRKLKAH-GLTFDVAFTSE 59
Query: 79 FLRCIQTAYEVVSAL 93
R T ++ L
Sbjct: 60 LTRAQHTLKLILDEL 74
>sp|P50201|MAS12_AGRRH Agropine synthesis reductase OS=Agrobacterium rhizogenes GN=mas1
PE=3 SV=1
Length = 430
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 50 EEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEV-VSALC-SVDDD 99
E G+ +A G LR PI V SP LR IQTA + LC +DDD
Sbjct: 56 ETGKRQAVLAGNVLRK---LPISSVVCSPLLRAIQTAVIANIGCLCFEIDDD 104
>sp|B4NE96|PGAM5_DROWI Serine/threonine-protein phosphatase Pgam5, mitochondrial
OS=Drosophila willistoni GN=Pgam5 PE=3 SV=1
Length = 291
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 10 QSNDKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGF 69
+ N + +++I++RHG+ D H+ E GR +A TG+RL +LG
Sbjct: 81 EKNHAKSARHIILIRHGEYLD--------VGDTDDTHHLTERGREQAKFTGQRLH-DLGI 131
Query: 70 PIDRVFVSPFLRCIQTA 86
D+V S +R +TA
Sbjct: 132 KWDKVIASTMVRAQETA 148
>sp|Q8TF42|UBS3B_HUMAN Ubiquitin-associated and SH3 domain-containing protein B OS=Homo
sapiens GN=UBASH3B PE=1 SV=2
Length = 649
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 71 IDRVFVSPFLRCIQTAYEVVSAL 93
ID V+ SP LRC+QTA+ ++ L
Sbjct: 463 IDHVYCSPSLRCVQTAHNILKGL 485
>sp|B4GXS1|PGAM5_DROPE Serine/threonine-protein phosphatase Pgam5, mitochondrial
OS=Drosophila persimilis GN=Pgam5 PE=3 SV=1
Length = 289
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVS 77
+++I++RHG+ D H+ E GR +A TG+RL LG D+V S
Sbjct: 87 RHIILIRHGEYLD--------VGDTDETHHLTERGREQAKYTGKRL-CELGIKWDKVIAS 137
Query: 78 PFLRCIQTA 86
+R +TA
Sbjct: 138 TMVRAQETA 146
>sp|Q8BGG7|UBS3B_MOUSE Ubiquitin-associated and SH3 domain-containing protein B OS=Mus
musculus GN=Ubash3b PE=1 SV=1
Length = 638
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 71 IDRVFVSPFLRCIQTAYEVVSAL 93
ID V+ SP LRC+QTA+ ++ L
Sbjct: 452 IDHVYCSPSLRCVQTAHNILKGL 474
>sp|Q29HG0|PGAM5_DROPS Serine/threonine-protein phosphatase Pgam5, mitochondrial
OS=Drosophila pseudoobscura pseudoobscura GN=Pgam5 PE=3
SV=1
Length = 289
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVS 77
+++I++RHG+ D H+ E GR +A TG+RL LG D+V S
Sbjct: 87 RHIILIRHGEYLD--------VGDTDETHHLTERGREQAKYTGKRL-CELGIKWDKVIAS 137
Query: 78 PFLRCIQTA 86
+R +TA
Sbjct: 138 TMVRAQETA 146
>sp|B4R313|PGAM5_DROSI Serine/threonine-protein phosphatase Pgam5, mitochondrial
OS=Drosophila simulans GN=Pgam5 PE=3 SV=1
Length = 289
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 3 SSETTKAQSNDKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRR 62
++E KA++ + ++I++RHG+ D V + H+ E GR +A TG+R
Sbjct: 75 NAELEKAKAKKAR---HIILVRHGEYLD------VGDSDD--THHLTERGRKQAEFTGKR 123
Query: 63 LRANLGFPIDRVFVSPFLRCIQTA 86
L LG D+V S LR +T+
Sbjct: 124 L-CELGIKWDKVVASTMLRAQETS 146
>sp|B0K4E2|GPMA_THEPX 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Thermoanaerobacter sp. (strain X514) GN=gpmA PE=3
SV=1
Length = 251
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVS 77
V+++RHG+ N E + P +EE R +G+ L+A G+ D F S
Sbjct: 2 HKVVLLRHGESLWNMENRFTGWTDVDLSPKGIEEAR----ESGKTLKAE-GYTFDCAFTS 56
Query: 78 PFLRCIQTAYEVVSAL 93
R I+T + V+ L
Sbjct: 57 VLKRAIRTLWIVLDEL 72
>sp|B0KBW9|GPMA_THEP3 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
OS=Thermoanaerobacter pseudethanolicus (strain ATCC
33223 / 39E) GN=gpmA PE=3 SV=1
Length = 251
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVS 77
V+++RHG+ N E + P +EE R +G+ L+A G+ D F S
Sbjct: 2 HKVVLLRHGESLWNMENRFTGWTDVDLSPKGIEEAR----ESGKTLKAE-GYTFDCAFTS 56
Query: 78 PFLRCIQTAYEVVSAL 93
R I+T + V+ L
Sbjct: 57 VLKRAIRTLWIVLDEL 72
>sp|A5VS40|PURA_BRUO2 Adenylosuccinate synthetase OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=purA PE=3 SV=2
Length = 429
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 162 SSVKQVYDQLPQWEETVAGAR 182
+ VK +Y+ LP W ET AGAR
Sbjct: 364 ARVKPIYETLPGWSETTAGAR 384
>sp|A9WWG0|PURA_BRUSI Adenylosuccinate synthetase OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=purA PE=3 SV=1
Length = 429
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 162 SSVKQVYDQLPQWEETVAGAR 182
+ VK +Y+ LP W ET AGAR
Sbjct: 364 ARVKPIYETLPGWSETTAGAR 384
>sp|A6WY94|PURA_OCHA4 Adenylosuccinate synthetase OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=purA PE=3 SV=1
Length = 429
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 162 SSVKQVYDQLPQWEETVAGAR 182
+ VK +Y+ LP W ET AGAR
Sbjct: 364 ARVKPIYETLPGWSETTAGAR 384
>sp|P65879|PURA_BRUSU Adenylosuccinate synthetase OS=Brucella suis biovar 1 (strain 1330)
GN=purA PE=3 SV=1
Length = 429
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 162 SSVKQVYDQLPQWEETVAGAR 182
+ VK +Y+ LP W ET AGAR
Sbjct: 364 ARVKPIYETLPGWSETTAGAR 384
>sp|P65878|PURA_BRUME Adenylosuccinate synthetase OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=purA PE=3 SV=1
Length = 429
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 162 SSVKQVYDQLPQWEETVAGAR 182
+ VK +Y+ LP W ET AGAR
Sbjct: 364 ARVKPIYETLPGWSETTAGAR 384
>sp|C0REU7|PURA_BRUMB Adenylosuccinate synthetase OS=Brucella melitensis biotype 2
(strain ATCC 23457) GN=purA PE=3 SV=1
Length = 429
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 162 SSVKQVYDQLPQWEETVAGAR 182
+ VK +Y+ LP W ET AGAR
Sbjct: 364 ARVKPIYETLPGWSETTAGAR 384
>sp|A9M7I3|PURA_BRUC2 Adenylosuccinate synthetase OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=purA PE=3 SV=1
Length = 429
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 162 SSVKQVYDQLPQWEETVAGAR 182
+ VK +Y+ LP W ET AGAR
Sbjct: 364 ARVKPIYETLPGWSETTAGAR 384
>sp|P0C115|PURA_BRUAB Adenylosuccinate synthetase OS=Brucella abortus biovar 1 (strain
9-941) GN=purA PE=3 SV=1
Length = 429
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 162 SSVKQVYDQLPQWEETVAGAR 182
+ VK +Y+ LP W ET AGAR
Sbjct: 364 ARVKPIYETLPGWSETTAGAR 384
>sp|Q2YQI5|PURA_BRUA2 Adenylosuccinate synthetase OS=Brucella abortus (strain 2308)
GN=purA PE=3 SV=1
Length = 429
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 162 SSVKQVYDQLPQWEETVAGAR 182
+ VK +Y+ LP W ET AGAR
Sbjct: 364 ARVKPIYETLPGWSETTAGAR 384
>sp|B4I9J6|PGAM5_DROSE Serine/threonine-protein phosphatase Pgam5, mitochondrial
OS=Drosophila sechellia GN=Pgam5 PE=3 SV=1
Length = 289
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 3 SSETTKAQSNDKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRR 62
++E KA++ + ++I++RHG+ D V + H+ E GR +A TG+R
Sbjct: 75 NAELEKAKAKKAR---HIILVRHGEYLD------VGDSDD--THHLTERGRKQAEFTGKR 123
Query: 63 LRANLGFPIDRVFVSPFLRCIQTA 86
L LG D+V S +R +T+
Sbjct: 124 L-CELGIKWDKVVASTMMRAQETS 146
>sp|B2RK53|SYV_PORG3 Valine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC 33277
/ DSM 20709 / JCM 12257) GN=valS PE=3 SV=1
Length = 876
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 79 FLRCIQTAYEVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMA 138
FL+ E+++A+ ++ V + + ++ S + + +M N EAI
Sbjct: 725 FLQAFDRTREIIAAIRNIRTGKNVPFKEKLTLEAGNEHDASFDAVIIKMGNLEAINRVEE 784
Query: 139 PKDGDFGFVTSELEALLPAGT---VDSSVKQVYDQLPQWEETVAGARER 184
G F+ LE +P G V+ +K++ D+L E+ +A ++
Sbjct: 785 KTSGSTSFLIGTLEYAIPMGALIDVEEEIKKLSDELAYQEKFLASVMKK 833
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,756,401
Number of Sequences: 539616
Number of extensions: 2885388
Number of successful extensions: 7055
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 7042
Number of HSP's gapped (non-prelim): 76
length of query: 212
length of database: 191,569,459
effective HSP length: 112
effective length of query: 100
effective length of database: 131,132,467
effective search space: 13113246700
effective search space used: 13113246700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)