Query 028163
Match_columns 212
No_of_seqs 110 out of 1337
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 07:13:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028163.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028163hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13463 phosphatase PhoE; Pro 100.0 2.8E-34 6E-39 225.7 10.9 155 17-211 2-156 (203)
2 PRK14116 gpmA phosphoglyceromu 100.0 1.2E-33 2.7E-38 225.6 12.0 177 18-211 2-187 (228)
3 PRK15004 alpha-ribazole phosph 100.0 8.5E-34 1.9E-38 222.3 10.1 154 18-211 1-154 (199)
4 PRK14119 gpmA phosphoglyceromu 100.0 2.8E-33 6E-38 223.7 12.5 178 18-211 2-187 (228)
5 PRK01295 phosphoglyceromutase; 100.0 1.4E-32 3.1E-37 216.3 12.7 161 16-211 1-163 (206)
6 COG0406 phoE Broad specificity 100.0 4.1E-32 8.9E-37 214.1 13.5 157 17-211 2-158 (208)
7 TIGR03162 ribazole_cobC alpha- 100.0 1.9E-32 4.2E-37 210.7 10.9 150 20-211 1-150 (177)
8 PRK14118 gpmA phosphoglyceromu 100.0 2.7E-32 5.8E-37 217.7 11.9 178 18-211 1-186 (227)
9 PRK14117 gpmA phosphoglyceromu 100.0 3.6E-32 7.7E-37 217.4 11.4 177 18-211 2-187 (230)
10 PRK03482 phosphoglycerate muta 100.0 4.9E-32 1.1E-36 214.7 11.9 154 18-211 2-155 (215)
11 TIGR01258 pgm_1 phosphoglycera 100.0 9.8E-32 2.1E-36 216.4 12.0 174 18-211 1-186 (245)
12 PRK01112 phosphoglyceromutase; 100.0 9.7E-32 2.1E-36 214.4 11.6 165 18-211 2-186 (228)
13 PRK13462 acid phosphatase; Pro 100.0 3.4E-31 7.3E-36 208.0 14.2 150 15-211 3-152 (203)
14 PRK14115 gpmA phosphoglyceromu 100.0 2.7E-31 5.8E-36 214.1 12.3 171 18-211 1-186 (247)
15 TIGR03848 MSMEG_4193 probable 100.0 3.8E-31 8.3E-36 208.0 12.7 152 19-211 1-157 (204)
16 PRK14120 gpmA phosphoglyceromu 100.0 5.2E-31 1.1E-35 212.5 12.5 180 16-211 3-188 (249)
17 smart00855 PGAM Phosphoglycera 100.0 2.1E-30 4.6E-35 195.3 14.4 151 19-211 1-153 (155)
18 PRK07238 bifunctional RNase H/ 100.0 1.4E-30 3E-35 222.1 13.4 165 7-211 161-325 (372)
19 PF00300 His_Phos_1: Histidine 100.0 2.3E-31 4.9E-36 200.2 5.7 155 19-211 1-156 (158)
20 PTZ00322 6-phosphofructo-2-kin 100.0 5.2E-29 1.1E-33 225.8 11.1 175 9-211 411-590 (664)
21 KOG4754 Predicted phosphoglyce 99.9 7.8E-27 1.7E-31 177.7 12.3 184 7-211 5-193 (248)
22 KOG0235 Phosphoglycerate mutas 99.9 7.7E-27 1.7E-31 181.4 12.2 164 16-211 4-169 (214)
23 KOG3734 Predicted phosphoglyce 99.9 1E-24 2.2E-29 174.1 14.7 172 14-211 9-207 (272)
24 PTZ00123 phosphoglycerate muta 99.9 7.2E-25 1.6E-29 175.9 10.3 164 30-211 1-174 (236)
25 COG0588 GpmA Phosphoglycerate 99.9 6.6E-24 1.4E-28 162.4 9.9 176 18-211 2-187 (230)
26 PTZ00122 phosphoglycerate muta 99.9 6.2E-23 1.3E-27 169.4 14.4 134 16-211 101-245 (299)
27 cd07067 HP_PGM_like Histidine 99.9 1.8E-22 3.8E-27 151.5 11.4 70 19-93 1-70 (153)
28 cd07040 HP Histidine phosphata 99.8 5.1E-20 1.1E-24 137.6 11.6 70 19-93 1-70 (153)
29 PRK06193 hypothetical protein; 99.8 6.4E-20 1.4E-24 143.1 11.0 135 8-211 33-168 (206)
30 TIGR00249 sixA phosphohistidin 99.8 7.9E-19 1.7E-23 131.8 13.0 68 18-94 1-68 (152)
31 PRK10848 phosphohistidine phos 99.8 5.8E-18 1.3E-22 127.9 11.9 68 18-94 1-68 (159)
32 KOG0234 Fructose-6-phosphate 2 99.7 5.1E-18 1.1E-22 143.2 8.7 158 9-211 231-388 (438)
33 PRK15416 lipopolysaccharide co 99.7 3E-17 6.5E-22 127.1 10.2 73 12-91 49-121 (201)
34 COG2062 SixA Phosphohistidine 99.6 1E-15 2.2E-20 114.8 8.5 71 17-94 1-71 (163)
35 KOG4609 Predicted phosphoglyce 99.6 2.4E-15 5.3E-20 115.3 9.9 67 16-94 93-159 (284)
36 cd07061 HP_HAP_like Histidine 98.3 1.2E-06 2.6E-11 70.5 6.4 62 18-94 4-74 (242)
37 PF00328 His_Phos_2: Histidine 97.6 0.00031 6.7E-09 58.8 8.2 48 47-94 62-117 (347)
38 KOG3720 Lysosomal & prostatic 97.0 0.0034 7.4E-08 54.5 8.2 76 18-94 36-128 (411)
39 PRK10173 glucose-1-phosphatase 96.5 0.016 3.4E-07 50.5 8.5 75 18-94 33-129 (413)
40 PRK10172 phosphoanhydride phos 95.9 0.061 1.3E-06 47.0 9.0 75 18-94 36-131 (436)
41 KOG1057 Arp2/3 complex-interac 93.4 0.14 3E-06 47.2 5.0 49 46-94 510-572 (1018)
42 KOG1382 Multiple inositol poly 88.3 1.4 3E-05 38.6 5.9 50 45-94 130-183 (467)
43 PF14606 Lipase_GDSL_3: GDSL-l 78.8 2.1 4.4E-05 32.9 2.7 32 177-208 72-103 (178)
44 PF09370 TIM-br_sig_trns: TIM- 77.7 3.7 8.1E-05 33.5 4.0 36 175-212 191-226 (268)
45 PLN02517 phosphatidylcholine-s 50.2 31 0.00068 31.7 4.8 33 175-207 189-221 (642)
46 KOG3734 Predicted phosphoglyce 47.7 4.3 9.4E-05 33.3 -0.9 50 45-94 40-90 (272)
47 PF01244 Peptidase_M19: Membra 47.6 27 0.00058 29.4 3.8 39 23-61 131-171 (320)
48 COG1134 TagH ABC-type polysacc 46.4 36 0.00078 27.6 4.1 28 178-207 179-206 (249)
49 PF12048 DUF3530: Protein of u 44.2 38 0.00081 28.4 4.2 29 179-208 174-202 (310)
50 PF07819 PGAP1: PGAP1-like pro 43.1 46 0.001 26.4 4.4 33 175-207 56-93 (225)
51 COG5564 Predicted TIM-barrel e 42.8 45 0.00097 26.7 4.1 35 175-211 197-231 (276)
52 TIGR03729 acc_ester putative p 37.8 75 0.0016 25.1 4.9 35 175-209 141-175 (239)
53 COG2355 Zn-dependent dipeptida 37.3 38 0.00081 28.5 3.1 38 24-61 123-160 (313)
54 PF01764 Lipase_3: Lipase (cla 36.8 80 0.0017 22.2 4.5 28 180-207 45-72 (140)
55 KOG3672 Histidine acid phospha 36.6 71 0.0015 27.8 4.6 47 47-93 168-226 (487)
56 cd07397 MPP_DevT Myxococcus xa 35.3 70 0.0015 25.8 4.3 33 175-210 126-158 (238)
57 cd01301 rDP_like renal dipepti 34.7 41 0.00088 28.2 3.0 39 23-61 127-165 (309)
58 cd04256 AAK_P5CS_ProBA AAK_P5C 32.9 65 0.0014 26.6 3.9 27 181-209 32-58 (284)
59 KOG2369 Lecithin:cholesterol a 32.9 83 0.0018 28.0 4.6 33 175-207 158-190 (473)
60 PF02450 LCAT: Lecithin:choles 31.2 79 0.0017 27.3 4.3 30 177-207 98-127 (389)
61 COG2248 Predicted hydrolase (m 31.2 56 0.0012 26.8 3.0 28 179-206 46-73 (304)
62 COG1116 TauB ABC-type nitrate/ 28.3 94 0.002 25.2 3.9 28 179-207 163-190 (248)
63 PF02604 PhdYeFM_antitox: Anti 28.1 1E+02 0.0022 19.3 3.4 30 177-208 5-34 (75)
64 PF13479 AAA_24: AAA domain 26.6 1.1E+02 0.0024 23.8 4.0 34 175-209 105-138 (213)
65 COG0488 Uup ATPase components 26.6 53 0.0012 29.8 2.5 31 176-207 179-209 (530)
66 PF04270 Strep_his_triad: Stre 25.9 51 0.0011 19.9 1.5 31 19-60 20-50 (53)
67 TIGR00824 EIIA-man PTS system, 25.8 1.4E+02 0.003 20.9 4.0 29 175-206 38-66 (116)
68 COG4118 Phd Antitoxin of toxin 24.9 1.5E+02 0.0032 19.7 3.8 32 176-210 5-36 (84)
69 TIGR01166 cbiO cobalt transpor 24.4 1.2E+02 0.0027 22.8 3.9 27 180-208 161-187 (190)
70 COG1117 PstB ABC-type phosphat 24.0 96 0.0021 25.0 3.1 22 183-207 186-207 (253)
71 COG4525 TauB ABC-type taurine 23.9 1.2E+02 0.0025 24.2 3.5 28 179-207 165-192 (259)
72 PRK12314 gamma-glutamyl kinase 23.2 1.4E+02 0.003 24.4 4.1 12 198-209 47-58 (266)
73 PF05990 DUF900: Alpha/beta hy 23.1 1.3E+02 0.0028 23.9 3.9 33 175-207 69-101 (233)
74 PF07897 DUF1675: Protein of u 22.8 54 0.0012 27.2 1.6 12 200-211 252-263 (284)
75 COG1121 ZnuC ABC-type Mn/Zn tr 22.7 1.1E+02 0.0025 24.9 3.5 24 182-207 175-198 (254)
76 PRK00865 glutamate racemase; P 22.1 3.3E+02 0.0071 22.0 6.1 55 149-206 22-76 (261)
77 PF15524 Toxin_45: Putative to 22.0 62 0.0013 21.4 1.5 15 43-57 61-75 (94)
78 cd03238 ABC_UvrA The excision 21.6 1.6E+02 0.0035 22.3 4.0 25 182-208 125-149 (176)
79 PTZ00149 hypoxanthine phosphor 21.5 1.9E+02 0.0041 23.3 4.5 34 176-209 58-93 (241)
80 TIGR01618 phage_P_loop phage n 21.0 1.6E+02 0.0036 23.3 4.0 30 177-208 114-143 (220)
81 COG1136 SalX ABC-type antimicr 20.9 1.5E+02 0.0033 23.7 3.8 30 179-209 175-204 (226)
82 cd01831 Endoglucanase_E_like E 20.7 2.3E+02 0.0049 20.7 4.6 30 176-205 74-103 (169)
83 smart00195 DSPc Dual specifici 20.5 2E+02 0.0042 20.3 4.1 34 176-211 58-91 (138)
84 PLN02733 phosphatidylcholine-s 20.2 1.8E+02 0.004 25.7 4.5 30 178-207 141-170 (440)
85 cd01836 FeeA_FeeB_like SGNH_hy 20.1 1.9E+02 0.0042 21.4 4.2 31 176-206 84-114 (191)
No 1
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=2.8e-34 Score=225.70 Aligned_cols=155 Identities=19% Similarity=0.182 Sum_probs=123.8
Q ss_pred ccEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccC
Q 028163 17 YQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSV 96 (212)
Q Consensus 17 ~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~ 96 (212)
.++||||||||+.+|..+.+.|. .|++||+.|++||+.+++.|.. .+++.|||||+.||+|||+++...++.
T Consensus 2 ~~~i~lvRHG~t~~n~~~~~~G~----~d~~Lt~~G~~Qa~~~~~~l~~---~~~~~i~sSpl~Ra~qTA~~i~~~~~~- 73 (203)
T PRK13463 2 KTTVYVTRHGETEWNVAKRMQGR----KNSALTENGILQAKQLGERMKD---LSIHAIYSSPSERTLHTAELIKGERDI- 73 (203)
T ss_pred ceEEEEEeCCCCccchhCcccCC----CCCCcCHHHHHHHHHHHHHhcC---CCCCEEEECCcHHHHHHHHHHHhcCCC-
Confidence 47899999999999998888875 5899999999999999999984 578999999999999999999876543
Q ss_pred CCCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCcccccccCCCCcC
Q 028163 97 DDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEE 176 (212)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~E 176 (212)
++.....+.|+++|.+||++..++...+|. ....|..++... .+++||
T Consensus 74 -------------~~~~~~~l~E~~~G~~eG~~~~e~~~~~p~------------------~~~~~~~~~~~~-~~~~gE 121 (203)
T PRK13463 74 -------------PIIADEHFYEINMGIWEGQTIDDIERQYPD------------------DIQLFWNEPHLF-QSTSGE 121 (203)
T ss_pred -------------CceECcCceeCCCCccCCCcHHHHhhhCHH------------------HHHHHHhChhcc-CCCCCe
Confidence 444556788999999999876666443322 111122223322 234699
Q ss_pred CHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 177 TVAGARERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 177 s~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
|++++..|+..+++.+...+.+++|||||||++|+
T Consensus 122 s~~~~~~R~~~~l~~i~~~~~~~~vlvVsHg~~ir 156 (203)
T PRK13463 122 NFEAVHKRVIEGMQLLLEKHKGESILIVSHAAAAK 156 (203)
T ss_pred EHHHHHHHHHHHHHHHHHhCCCCEEEEEeChHHHH
Confidence 99999999999999998777778999999999986
No 2
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.2e-33 Score=225.58 Aligned_cols=177 Identities=16% Similarity=0.164 Sum_probs=126.0
Q ss_pred cEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCC
Q 028163 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~ 97 (212)
++||||||||+.+|..+.++|. .|.+||+.|++||+.+++.|.. .+.+++.||||||.||+|||++|....+..
T Consensus 2 ~~l~LVRHGeT~~N~~~~~~G~----~D~pLt~~G~~QA~~l~~~L~~-~~~~~d~i~sSpL~Ra~qTA~~i~~~~~~~- 75 (228)
T PRK14116 2 AKLVLIRHGQSEWNLSNQFTGW----VDVDLSEKGVEEAKKAGRLIKE-AGLEFDQAYTSVLTRAIKTLHYALEESDQL- 75 (228)
T ss_pred CEEEEEeCCCCCCccccCcCCC----CCCCcCHHHHHHHHHHHHHHHh-cCCCCCEEEECChHHHHHHHHHHHHhcCcC-
Confidence 6899999999999999988885 5899999999999999999983 445799999999999999999998664310
Q ss_pred CCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCC-CCCCCCChHHHH-----HhCCCCccCCCc-cccccc
Q 028163 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPK-DGDFGFVTSELE-----ALLPAGTVDSSV-KQVYDQ 170 (212)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~p~~~~~~~~-~~~~~~ 170 (212)
.+ ++...+.+.|+++|.|||+++.++...+++. +..|..+..... ..+.....+..+ ++.. .
T Consensus 76 ---------~~-~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 144 (228)
T PRK14116 76 ---------WI-PETKTWRLNERHYGALQGLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEGSAAKDRRYANLDP-R 144 (228)
T ss_pred ---------CC-CcccCcccccccchhhcCCCHHHHHHHhhhhHHHHHhhcccccCcccccccccccccchhhhccCc-c
Confidence 01 3444557899999999999988887665442 222211100000 000000000111 1111 1
Q ss_pred CCCCcCCHHHHHHHHHHHHHHHHh-h-CCCCcEEEEecCCCCC
Q 028163 171 LPQWEETVAGARERYAQVIKALAD-K-YPFEDLLLVTHGNLLS 211 (212)
Q Consensus 171 ~~~~~Es~~~~~~R~~~~l~~l~~-~-~~~~~vliVsH~~~i~ 211 (212)
.+++|||+.++.+|+..++++++. . .++++|||||||++|+
T Consensus 145 ~~pgGEs~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVsHg~vir 187 (228)
T PRK14116 145 IIPGGENLKVTLERVIPFWEDHIAPDLLDGKNVIIAAHGNSLR 187 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCeEEEEcChHHHH
Confidence 345699999999999999999764 2 3578999999999986
No 3
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=8.5e-34 Score=222.31 Aligned_cols=154 Identities=21% Similarity=0.252 Sum_probs=122.5
Q ss_pred cEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCC
Q 028163 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~ 97 (212)
|+||||||||+.+|..+.+.|. .|++||+.|++||+.+++.|.. .+++.|||||+.||+|||+++++.++.
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~G~----~d~pLt~~G~~Qa~~~~~~l~~---~~~~~i~sSpl~Ra~qTA~~i~~~~~~-- 71 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYSGH----APTPLTARGIEQAQNLHTLLRD---VPFDLVLCSELERAQHTARLVLSDRQL-- 71 (199)
T ss_pred CeEEEEeCCCCccccCCcEeCC----CCCCcCHHHHHHHHHHHHHHhC---CCCCEEEECchHHHHHHHHHHHhcCCC--
Confidence 6799999999999998888875 5899999999999999999984 678999999999999999999876643
Q ss_pred CCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCcccccccCCCCcCC
Q 028163 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEET 177 (212)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~Es 177 (212)
++...+.+.|+++|.||+++..++....+..+..| ..++. ...|+++||
T Consensus 72 ------------~~~~~~~L~E~~~G~~eg~~~~~~~~~~~~~~~~~------------------~~~~~-~~~~~~gEs 120 (199)
T PRK15004 72 ------------PVHIIPELNEMFFGDWEMRHHRDLMQEDAENYAAW------------------CNDWQ-HAIPTNGEG 120 (199)
T ss_pred ------------CceeChhheeCCCcccCCCCHHHHHHHCHHHHHHH------------------HhChh-hcCCCCCcC
Confidence 44445568999999999987766544332211111 11111 123446999
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 178 VAGARERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 178 ~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
+.++.+|+..+++++....++++|||||||++|+
T Consensus 121 ~~~~~~Rv~~~l~~l~~~~~~~~iliVsHg~~i~ 154 (199)
T PRK15004 121 FQAFSQRVERFIARLSAFQHYQNLLIVSHQGVLS 154 (199)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEcChHHHH
Confidence 9999999999999999877778999999999885
No 4
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.8e-33 Score=223.66 Aligned_cols=178 Identities=19% Similarity=0.201 Sum_probs=125.2
Q ss_pred cEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCC
Q 028163 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~ 97 (212)
++||||||||+.+|..+.++|+ .|.+||+.|++||+.+++.|.. .+.+++.||||||.||+|||++|.+..+..
T Consensus 2 ~~l~LvRHGeT~~N~~~~~~G~----~D~pLt~~G~~QA~~l~~~L~~-~~~~~d~i~sSpL~Ra~~TA~~i~~~~~~~- 75 (228)
T PRK14119 2 PKLILCRHGQSEWNAKNLFTGW----EDVNLSEQGINEATRAGEKVRE-NNIAIDVAFTSLLTRALDTTHYILTESKQQ- 75 (228)
T ss_pred CEEEEEeCCCCCcccCCCccCC----CCCCcCHHHHHHHHHHHHHHHh-cCCCCCEEEeCccHHHHHHHHHHHHhcccC-
Confidence 6899999999999999988885 5899999999999999999983 445799999999999999999998654210
Q ss_pred CCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCC-CCCCCCChHHHH-----HhCCCCccCCCcccccccC
Q 028163 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPK-DGDFGFVTSELE-----ALLPAGTVDSSVKQVYDQL 171 (212)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~p~~~~~~~~~~~~~~~ 171 (212)
++ ++.....+.|+++|.|||+++.++...++.. +..|..+..... ...-.+..+..|.......
T Consensus 76 ---------~~-~~~~~~~LrE~~fG~weG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 145 (228)
T PRK14119 76 ---------WI-PVYKSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRM 145 (228)
T ss_pred ---------CC-CeeECCCccccccccccCCcHHHHHHHccHHHHHHHHcccccCCCccccccccccccccccccccccc
Confidence 01 3344557899999999999888877655432 112210000000 0000000000011011122
Q ss_pred CCCcCCHHHHHHHHHHHHHHHHhhC--CCCcEEEEecCCCCC
Q 028163 172 PQWEETVAGARERYAQVIKALADKY--PFEDLLLVTHGNLLS 211 (212)
Q Consensus 172 ~~~~Es~~~~~~R~~~~l~~l~~~~--~~~~vliVsH~~~i~ 211 (212)
+++|||+.++.+|+..++++++..+ ++++|||||||++|+
T Consensus 146 ~p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~vir 187 (228)
T PRK14119 146 MPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIR 187 (228)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhhccCCCeEEEEeChHHHH
Confidence 3569999999999999999987554 568899999999986
No 5
>PRK01295 phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.4e-32 Score=216.29 Aligned_cols=161 Identities=21% Similarity=0.303 Sum_probs=120.6
Q ss_pred CccEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhcc
Q 028163 16 FYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCS 95 (212)
Q Consensus 16 ~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~ 95 (212)
+.++|||||||++.+|..+.+.|. .|.+||+.|++||+.++++|. ..+.+++.|||||+.||+|||++|.+.++.
T Consensus 1 ~~~~i~LVRHGet~~n~~~~~~G~----~d~~Lt~~G~~qA~~~~~~L~-~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~ 75 (206)
T PRK01295 1 MSRTLVLVRHGQSEWNLKNLFTGW----RDPDLTEQGVAEAKAAGRKLK-AAGLKFDIAFTSALSRAQHTCQLILEELGQ 75 (206)
T ss_pred CCceEEEEeCCCCcccccCCcCCC----CCCCcCHHHHHHHHHHHHHHH-hCCCCCCEEEeCCcHHHHHHHHHHHHHcCC
Confidence 457899999999999998888774 488999999999999999998 345679999999999999999999987642
Q ss_pred CCCCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCcccccccCCCCc
Q 028163 96 VDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWE 175 (212)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 175 (212)
. ++ ++...+.+.|+++|.|+|++..++...+++.. . ..|. .+.. ..+++|
T Consensus 76 ~----------~~-~~~~~~~L~E~~~G~~eg~~~~e~~~~~~~~~----------~-------~~~~-~~~~-~~~p~G 125 (206)
T PRK01295 76 P----------GL-ETIRDQALNERDYGDLSGLNKDDARAKWGEEQ----------V-------HIWR-RSYD-VPPPGG 125 (206)
T ss_pred C----------CC-CeEECCcccccccccccCCcHHHHHHHchHHH----------H-------HHhh-cccC-CCCcCC
Confidence 0 01 33445567899999999987666554332210 0 1111 1111 234469
Q ss_pred CCHHHHHHHHHHHH-HHHHhhC-CCCcEEEEecCCCCC
Q 028163 176 ETVAGARERYAQVI-KALADKY-PFEDLLLVTHGNLLS 211 (212)
Q Consensus 176 Es~~~~~~R~~~~l-~~l~~~~-~~~~vliVsH~~~i~ 211 (212)
||+.++.+|+..++ +.+.... .+++|||||||++|+
T Consensus 126 ES~~~~~~Rv~~~~~~~i~~~~~~~~~vliVtHg~~ir 163 (206)
T PRK01295 126 ESLKDTGARVLPYYLQEILPRVLRGERVLVAAHGNSLR 163 (206)
T ss_pred CCHHHHHHHHHHHHHHHHHHhccCCCeEEEEcChHHHH
Confidence 99999999999974 6676543 568999999999986
No 6
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=99.98 E-value=4.1e-32 Score=214.07 Aligned_cols=157 Identities=24% Similarity=0.318 Sum_probs=128.4
Q ss_pred ccEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccC
Q 028163 17 YQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSV 96 (212)
Q Consensus 17 ~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~ 96 (212)
.++||||||||+.+|..+.+++. .|++||+.|++||+.+++.|. ..+.+++.||+||+.||+|||.++++.++.
T Consensus 2 ~~~i~lvRHGqt~~n~~~~~~G~----~d~pLt~~G~~QA~~l~~~l~-~~~~~~~~i~sS~l~Ra~~TA~~~a~~~~~- 75 (208)
T COG0406 2 MMRLYLVRHGETEWNVEGRLQGW----TDSPLTEEGRAQAEALAERLA-ARDIGFDAIYSSPLKRAQQTAEPLAEELGL- 75 (208)
T ss_pred ceEEEEEecCCccccccccccCC----CCCCCCHHHHHHHHHHHHHHh-hcCCCCCEEEECchHHHHHHHHHHHHhcCC-
Confidence 58999999999999999888883 588999999999999999999 345789999999999999999999999874
Q ss_pred CCCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCcccccccCCCCcC
Q 028163 97 DDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEE 176 (212)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~E 176 (212)
.+.....+.|+++|.+|++...++... +|.....|..++.....+. +|
T Consensus 76 -------------~~~~~~~l~E~~~G~~eg~~~~e~~~~------------------~p~~~~~~~~~~~~~~~~~-gE 123 (208)
T COG0406 76 -------------PLEVDDRLREIDFGDWEGLTIDELAEE------------------PPEELAAWLADPYLAPPPG-GE 123 (208)
T ss_pred -------------CceecCCeeEeecccccCCcHHHHHHh------------------CHHHHHHHhcCccccCCCC-CC
Confidence 344566788999999999766655443 3333333434444444443 89
Q ss_pred CHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 177 TVAGARERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 177 s~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
|+.++..|+..++.++.....+++|+|||||++||
T Consensus 124 s~~~~~~R~~~~~~~~~~~~~~~~vlvVsHg~~ir 158 (208)
T COG0406 124 SLADVSKRVVAALAELLRSPPGNNVLVVSHGGVIR 158 (208)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEEEEChHHHH
Confidence 99999999999999999876666899999999985
No 7
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=99.98 E-value=1.9e-32 Score=210.67 Aligned_cols=150 Identities=20% Similarity=0.269 Sum_probs=117.9
Q ss_pred EEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCCCC
Q 028163 20 VIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVDDD 99 (212)
Q Consensus 20 i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~~~ 99 (212)
||||||||+.+|..+.+ +. .|++||+.|++||+.+++.|.. .+++.|||||+.||+|||+++...++.
T Consensus 1 i~lvRHg~t~~n~~~~~-g~----~d~~Lt~~G~~qa~~l~~~l~~---~~~~~i~sSpl~Ra~qTA~~i~~~~~~---- 68 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY-GQ----TDVPLAEKGAEQAAALREKLAD---VPFDAVYSSPLSRCRELAEILAERRGL---- 68 (177)
T ss_pred CEEEeCCCCccCCCcee-CC----CCCCcChhHHHHHHHHHHHhcC---CCCCEEEECchHHHHHHHHHHHhhcCC----
Confidence 69999999999988777 53 5899999999999999999973 679999999999999999999987653
Q ss_pred CcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCcccccccCCCCcCCHH
Q 028163 100 PTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEETVA 179 (212)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~Es~~ 179 (212)
++...+.+.|+++|.+++++..++...++ .+. .|..++... .++++||+.
T Consensus 69 ----------~~~~~~~L~E~~~G~~~g~~~~~~~~~~~-~~~------------------~~~~~~~~~-~~~~gEs~~ 118 (177)
T TIGR03162 69 ----------PIIKDPRLREMDFGDWEGRSWDEIPEAYP-ELD------------------AWAADWQHA-RPPGGESFA 118 (177)
T ss_pred ----------CceECCccccccCCccCCCCHHHHHHhCH-HHH------------------HHHhCcccC-CCcCCCCHH
Confidence 44445567888999998876665544322 111 111122222 244589999
Q ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 180 GARERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 180 ~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
++..|+..++++|....++++|||||||++|+
T Consensus 119 ~~~~R~~~~~~~l~~~~~~~~vlvVsHg~~i~ 150 (177)
T TIGR03162 119 DFYQRVSEFLEELLKAHEGDNVLIVTHGGVIR 150 (177)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEECHHHHH
Confidence 99999999999999876778999999999885
No 8
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=99.98 E-value=2.7e-32 Score=217.73 Aligned_cols=178 Identities=19% Similarity=0.214 Sum_probs=123.7
Q ss_pred cEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCC
Q 028163 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~ 97 (212)
|+||||||||+.+|..+.++|. .|.+||+.|++||+.+++.|.. .+.+++.|||||+.||+|||++|....+..
T Consensus 1 m~l~LvRHG~t~~n~~~~~~G~----~d~~Lt~~G~~qa~~~~~~l~~-~~~~~d~i~sSpl~Ra~~TA~~i~~~~~~~- 74 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFTGW----RDVNLTERGVEEAKAAGKKLKE-AGYEFDIAFTSVLTRAIKTCNIVLEESNQL- 74 (227)
T ss_pred CEEEEEecCCCccccccCcCCC----CCCCCCHHHHHHHHHHHHHHHh-cCCCCCEEEEeChHHHHHHHHHHHHhcCCC-
Confidence 6899999999999999888885 5899999999999999999983 445789999999999999999998754310
Q ss_pred CCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCC-CCCCCCChHH----HHHhCCCCc-cCCCcccccccC
Q 028163 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPK-DGDFGFVTSE----LEALLPAGT-VDSSVKQVYDQL 171 (212)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~p~~~-~~~~~~~~~~~~ 171 (212)
.+ ++...+.+.|+++|.|||++..++....+.. +..|..+... +....+... .+..+.......
T Consensus 75 ---------~~-~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (227)
T PRK14118 75 ---------WI-PQVKNWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQDPNSAHNDRRYAHLPADV 144 (227)
T ss_pred ---------CC-CeecCCccccccCccccCCcHHHHHHHhhHHHHHHHHhccccCCCccccccccccccchhhccCcCCC
Confidence 01 3334446899999999999888876654331 1112100000 000000000 000000001123
Q ss_pred CCCcCCHHHHHHHHHHHHHHHHhh--CCCCcEEEEecCCCCC
Q 028163 172 PQWEETVAGARERYAQVIKALADK--YPFEDLLLVTHGNLLS 211 (212)
Q Consensus 172 ~~~~Es~~~~~~R~~~~l~~l~~~--~~~~~vliVsH~~~i~ 211 (212)
+++|||+.++.+|+..++++++.. .++++|||||||++|+
T Consensus 145 ~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHggvir 186 (227)
T PRK14118 145 VPDAENLKVTLERVLPFWEDQIAPALLSGKRVLVAAHGNSLR 186 (227)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCeEEEEeCHHHHH
Confidence 456999999999999999998753 3568899999999986
No 9
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=99.98 E-value=3.6e-32 Score=217.38 Aligned_cols=177 Identities=19% Similarity=0.173 Sum_probs=123.9
Q ss_pred cEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCC
Q 028163 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~ 97 (212)
++|||||||++.+|..+.++|. .|.+||+.|++||+.+++.|.. .+.+++.|||||+.||+|||+++.......
T Consensus 2 ~~l~LvRHG~t~~n~~~~~qG~----~D~~Lt~~G~~qa~~~~~~l~~-~~~~~~~i~sSpl~Ra~~TA~~i~~~~~~~- 75 (230)
T PRK14117 2 VKLVFARHGESEWNKANLFTGW----ADVDLSEKGTQQAIDAGKLIKE-AGIEFDLAFTSVLKRAIKTTNLALEASDQL- 75 (230)
T ss_pred CEEEEEeCccccCcccCCcCCC----CCCCcCHHHHHHHHHHHHHHHH-cCCCCCEEEECCcHHHHHHHHHHHHhcccC-
Confidence 7899999999999999999885 5899999999999999999983 446789999999999999999987532210
Q ss_pred CCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCC-CCCCCCChHHHH------HhCCCCccCCCccccccc
Q 028163 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPK-DGDFGFVTSELE------ALLPAGTVDSSVKQVYDQ 170 (212)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~p~~~~~~~~~~~~~~ 170 (212)
++ ++...+.+.|+++|.|||++..++...++.. +..|..+..... ..+.. ..+..+......
T Consensus 76 ---------~~-~~~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 144 (230)
T PRK14117 76 ---------WV-PVEKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKDDEYSA-HTDRRYASLDDS 144 (230)
T ss_pred ---------CC-CceeCCccccccchhhcCCCHHHHHHHccHHHHHHHhcccccCCCcccccccccc-cccccccccccC
Confidence 11 3444456899999999999988887665442 122211000000 00000 000001111112
Q ss_pred CCCCcCCHHHHHHHHHHHHHHHH-hhC-CCCcEEEEecCCCCC
Q 028163 171 LPQWEETVAGARERYAQVIKALA-DKY-PFEDLLLVTHGNLLS 211 (212)
Q Consensus 171 ~~~~~Es~~~~~~R~~~~l~~l~-~~~-~~~~vliVsH~~~i~ 211 (212)
.+++|||+.++.+|+..++++++ ... .+++|||||||++||
T Consensus 145 ~~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~~ir 187 (230)
T PRK14117 145 VIPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIR 187 (230)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHHHH
Confidence 34569999999999999999976 333 357899999999986
No 10
>PRK03482 phosphoglycerate mutase; Provisional
Probab=99.98 E-value=4.9e-32 Score=214.74 Aligned_cols=154 Identities=18% Similarity=0.167 Sum_probs=119.2
Q ss_pred cEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCC
Q 028163 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~ 97 (212)
++||||||||+.+|..+.+.+. .|.+||+.|++||+.+++.|.. .+++.|||||+.||+|||+++.+.++.
T Consensus 2 ~~i~lvRHG~t~~n~~~~~~g~----~d~~Lt~~G~~qA~~~~~~l~~---~~~~~I~sSpl~Ra~qTA~~i~~~~~~-- 72 (215)
T PRK03482 2 LQVYLVRHGETQWNAERRIQGQ----SDSPLTAKGEQQAMQVAERAKE---LGITHIISSDLGRTRRTAEIIAQACGC-- 72 (215)
T ss_pred cEEEEEeCCCcccccccccCCC----CCCCcCHHHHHHHHHHHHHHhc---CCCCEEEECCcHHHHHHHHHHHHhcCC--
Confidence 7899999999999988877764 5899999999999999999984 578999999999999999999887753
Q ss_pred CCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCcccccccCCCCcCC
Q 028163 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEET 177 (212)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~Es 177 (212)
++...+.+.|+++|.+|++...++.... ..| ...+ ...+... .++++||
T Consensus 73 ------------~~~~~~~L~E~~~G~~eg~~~~~~~~~~----~~~-------~~~~-------~~~~~~~-~~p~gEs 121 (215)
T PRK03482 73 ------------DIIFDPRLRELNMGVLEKRHIDSLTEEE----EGW-------RRQL-------VNGTVDG-RIPEGES 121 (215)
T ss_pred ------------CeeEChhccccCCccccCCcHHHHHhhH----HHH-------HHhh-------hcCCCcc-CCCCCcc
Confidence 4444556789999999998766543210 011 1111 0011111 2345899
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 178 VAGARERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 178 ~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
+.++..|+..+++.+.....+++|||||||++|+
T Consensus 122 ~~~~~~Rv~~~l~~~~~~~~~~~vliVsHg~~i~ 155 (215)
T PRK03482 122 MQELSDRMHAALESCLELPQGSRPLLVSHGIALG 155 (215)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEeCcHHHH
Confidence 9999999999999998766677899999999885
No 11
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=99.97 E-value=9.8e-32 Score=216.42 Aligned_cols=174 Identities=20% Similarity=0.235 Sum_probs=123.4
Q ss_pred cEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCC
Q 028163 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~ 97 (212)
|+||||||||+.+|..+.+.+. .|.+||+.|++||+.+++.|. ..+.+++.|||||+.||+|||++|...++..
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~G~----~D~~Lt~~G~~QA~~la~~L~-~~~~~~d~iysSpl~Ra~qTA~ii~~~~~~~- 74 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFTGW----VDVKLSEKGQQEAKRAGELLK-EEGYEFDVAYTSLLKRAIHTLNIALDELDQL- 74 (245)
T ss_pred CEEEEEeCCCcCccccCCcCCC----CCCCcCHHHHHHHHHHHHHHH-hcCCCCCEEEEcChHHHHHHHHHHHHhcCCC-
Confidence 6799999999999998888875 589999999999999999998 3445789999999999999999998776420
Q ss_pred CCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCC-CCCCCCChHHHHHhCCCCc--cCCC---cccccc--
Q 028163 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPK-DGDFGFVTSELEALLPAGT--VDSS---VKQVYD-- 169 (212)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~--~~~~---~~~~~~-- 169 (212)
.. ++...+.+.|+++|.|||+++.++...++.. +..|..... ..|... .+.. .++.|.
T Consensus 75 ---------~~-~i~~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~----~~~~~~~~~~~~~~~~d~~y~~~ 140 (245)
T TIGR01258 75 ---------WI-PVKKSWRLNERHYGALQGLNKAETAAKYGEEQVNIWRRSFD----VPPPPIDESDPRSPHNDPRYAHL 140 (245)
T ss_pred ---------CC-CeeeCcccccccCCCCcCCCHHHHHHHhhHHHHHHHHhhcc----CCCCcCCcccccccccChhhhcC
Confidence 01 3333456899999999999888876654431 111100000 000000 0000 011111
Q ss_pred --cCCCCcCCHHHHHHHHHHHHHHHHhh--CCCCcEEEEecCCCCC
Q 028163 170 --QLPQWEETVAGARERYAQVIKALADK--YPFEDLLLVTHGNLLS 211 (212)
Q Consensus 170 --~~~~~~Es~~~~~~R~~~~l~~l~~~--~~~~~vliVsH~~~i~ 211 (212)
..+++|||+.++..|+..+|+++... .++++|||||||++|+
T Consensus 141 ~~~~~p~GES~~~~~~Rv~~~l~~l~~~~~~~~~~vlvVsHg~vir 186 (245)
T TIGR01258 141 DPKVLPLTESLKDTIARVLPYWNDEIAPDLLSGKRVLIVAHGNSLR 186 (245)
T ss_pred CcccCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCEEEEEcChHHHH
Confidence 12346999999999999999998643 3567899999999986
No 12
>PRK01112 phosphoglyceromutase; Provisional
Probab=99.97 E-value=9.7e-32 Score=214.37 Aligned_cols=165 Identities=19% Similarity=0.270 Sum_probs=119.7
Q ss_pred cEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCC
Q 028163 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~ 97 (212)
++||||||||+.+|..+.+.|. .|.+||+.|++||+.+++.|.. .+++.|||||+.||+|||+.+...+..
T Consensus 2 ~~L~LvRHGqt~~n~~~~~~G~----~D~~Lte~G~~Qa~~l~~~L~~---~~~d~iysSpl~Ra~qTA~~i~~~~~~-- 72 (228)
T PRK01112 2 ALLILLRHGQSVWNAKNLFTGW----VDIPLSQQGIAEAIAAGEKIKD---LPIDCIFTSTLVRSLMTALLAMTNHSS-- 72 (228)
T ss_pred cEEEEEeCCCCccccccccCCC----CCCCcCHHHHHHHHHHHHHhhc---CCCCEEEEcCcHHHHHHHHHHHHhhcc--
Confidence 6899999999999998888875 5889999999999999999984 689999999999999999999864321
Q ss_pred CCCccc------------------ccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCc
Q 028163 98 DDPTVM------------------SSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGT 159 (212)
Q Consensus 98 ~~~~~~------------------~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 159 (212)
..+|.. ....+ ++.....+.|+++|.|||+++.++...++..+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~E~~~G~~eG~~~~ei~~~~~~~~------------------ 133 (228)
T PRK01112 73 GKIPYIVHEEDDKKWMSRIYSDEEPEQMI-PLFQSSALNERMYGELQGKNKAETAEKFGEEQ------------------ 133 (228)
T ss_pred cccccccccccccccccccccccccccCC-CeeecCccccccccccCCCCHHHHHHHCcHHH------------------
Confidence 000000 00111 33445577899999999987776654432211
Q ss_pred cCCCcccccccCCCCcCCHHHHHHHHHHHHHHHHhhC--CCCcEEEEecCCCCC
Q 028163 160 VDSSVKQVYDQLPQWEETVAGARERYAQVIKALADKY--PFEDLLLVTHGNLLS 211 (212)
Q Consensus 160 ~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~--~~~~vliVsH~~~i~ 211 (212)
..++.++... .+++|||+.++..|+..+++.++... .+++|+|||||++|+
T Consensus 134 ~~~w~~~~~~-~~p~GES~~d~~~Rv~~~l~~~~~~~~~~~~~ilVVsHg~vir 186 (228)
T PRK01112 134 VKLWRRSYKT-APPQGESLEDTGQRTLPYFQNRILPHLQQGKNVFVSAHGNSLR 186 (228)
T ss_pred HHHHhCcCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHH
Confidence 1111112222 34469999999999999999764322 467999999999986
No 13
>PRK13462 acid phosphatase; Provisional
Probab=99.97 E-value=3.4e-31 Score=207.97 Aligned_cols=150 Identities=23% Similarity=0.277 Sum_probs=116.6
Q ss_pred CCccEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhc
Q 028163 15 QFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALC 94 (212)
Q Consensus 15 ~~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~ 94 (212)
...++||||||||+.+|..+.+++. .|.+||+.|++||+.+++.|.. ..+..+.|||||+.||+|||+.+ .+.
T Consensus 3 ~~~~~i~LvRHG~t~~n~~~~~~G~----~d~pLt~~G~~QA~~l~~~l~~-~~~~~~~i~sSpl~Ra~qTA~~i--~~~ 75 (203)
T PRK13462 3 VRNHRLLLLRHGETEWSKSGRHTGR----TELELTETGRTQAELAGQALGE-LELDDPLVISSPRRRALDTAKLA--GLT 75 (203)
T ss_pred ccccEEEEEeCCCCCcccCCCccCC----CCCCCCHHHHHHHHHHHHHHHh-CCCCCCEEEECchHHHHHHHHHh--cCc
Confidence 3468999999999999998888875 5889999999999999999983 33333489999999999999987 221
Q ss_pred cCCCCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCcccccccCCCC
Q 028163 95 SVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQW 174 (212)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 174 (212)
.....+.+.|+++|.|||+...++...++. | ..|. ...| +
T Consensus 76 ---------------~~~~~~~LrE~~~G~~eG~~~~ei~~~~~~----~---------------~~~~-----~~~p-~ 115 (203)
T PRK13462 76 ---------------VDEVSGLLAEWDYGSYEGLTTPQIRESEPD----W---------------LVWT-----HGCP-G 115 (203)
T ss_pred ---------------ccccCccccccCCccccCCcHHHHHHhCch----H---------------Hhhc-----CCCC-C
Confidence 112344678999999999876665543221 1 1111 1123 5
Q ss_pred cCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 175 EETVAGARERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
|||+.++..|+..+++.+...+++++|||||||++|+
T Consensus 116 gES~~~~~~Rv~~~l~~i~~~~~~~~vliVsHg~vir 152 (203)
T PRK13462 116 GESVAQVNERADRAVALALEHMESRDVVFVSHGHFSR 152 (203)
T ss_pred CccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHHH
Confidence 8999999999999999998777788999999999986
No 14
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=2.7e-31 Score=214.12 Aligned_cols=171 Identities=19% Similarity=0.234 Sum_probs=123.2
Q ss_pred cEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCC
Q 028163 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~ 97 (212)
|+||||||||+.+|..+.+.|. .|.+||+.|++||+.+++.|. ..+.+++.|||||+.||+|||+.|.+.++..
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~G~----~D~pLte~G~~QA~~la~~L~-~~~~~~d~IysSpl~Ra~qTA~~i~~~~~~~- 74 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFTGW----TDVDLSEKGVSEAKAAGKLLK-EEGYTFDVAYTSVLKRAIRTLWIVLDELDQM- 74 (247)
T ss_pred CEEEEEECCCcccccccCcCCC----CCCCcCHHHHHHHHHHHHHHH-hcCCCCCEEEEcCCHHHHHHHHHHHHHcCCC-
Confidence 6899999999999998888875 588999999999999999998 3456789999999999999999998776420
Q ss_pred CCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCC-CCCCCCChHHHHHhCCCCc-----cCCC---ccccc
Q 028163 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPK-DGDFGFVTSELEALLPAGT-----VDSS---VKQVY 168 (212)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~-----~~~~---~~~~~ 168 (212)
.+ ++...+.+.|+++|.|||+.+.++...++.. +..|.. .+.... .+.. .++.+
T Consensus 75 ---------~~-~~~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 137 (247)
T PRK14115 75 ---------WL-PVEKSWRLNERHYGALQGLNKAETAAKYGDEQVKIWRR-------SYDVPPPALEKDDERYPGHDPRY 137 (247)
T ss_pred ---------CC-CceECccccccccccccCCCHHHHHHHhhHHHHHHHhc-------ccccCCCcccccccccccccchh
Confidence 01 3334556899999999999888776544331 111200 000000 0000 01111
Q ss_pred ----ccCCCCcCCHHHHHHHHHHHHHHHHhh--CCCCcEEEEecCCCCC
Q 028163 169 ----DQLPQWEETVAGARERYAQVIKALADK--YPFEDLLLVTHGNLLS 211 (212)
Q Consensus 169 ----~~~~~~~Es~~~~~~R~~~~l~~l~~~--~~~~~vliVsH~~~i~ 211 (212)
...+++|||+.++..|+..+|++++.. .++++|||||||++|+
T Consensus 138 ~~~~~~~~p~GES~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVtHggvir 186 (247)
T PRK14115 138 AKLPEEELPLTESLKDTIARVLPYWNETIAPQLKSGKRVLIAAHGNSLR 186 (247)
T ss_pred hcccCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeChHHHH
Confidence 112446999999999999999987532 3567899999999985
No 15
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=99.97 E-value=3.8e-31 Score=208.03 Aligned_cols=152 Identities=20% Similarity=0.266 Sum_probs=118.5
Q ss_pred EEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCCC
Q 028163 19 NVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVDD 98 (212)
Q Consensus 19 ~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~~ 98 (212)
+||||||||+.+|..+.+++.. .|.+||+.|++||+.+++.|.. .+++.||||||.||+|||+++.+.++.
T Consensus 1 ~i~lvRHG~t~~n~~~~~~g~~---~d~~Lt~~G~~qa~~l~~~l~~---~~~~~i~sSpl~Ra~qTA~~i~~~~~~--- 71 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLAGRT---PGVDLDERGREQAAALAERLAD---LPIAAIVSSPLERCRETAEPIAEARGL--- 71 (204)
T ss_pred CEEEEeCCCCCccccccccCCC---CCCCcCHHHHHHHHHHHHHHhc---CCCCEEEeCcHHHHHHHHHHHHHhcCC---
Confidence 4899999999999988888752 2589999999999999999984 679999999999999999999987653
Q ss_pred CCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCcccccccCCCCcCCH
Q 028163 99 DPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEETV 178 (212)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~Es~ 178 (212)
++...+.+.|+++|.|||+...++... . .| ..| ...+... .++++||+
T Consensus 72 -----------~~~~~~~L~E~~~G~~eG~~~~e~~~~--~---~~--------~~~-------~~~~~~~-~~p~gEs~ 119 (204)
T TIGR03848 72 -----------PPRVDERLGECDYGDWTGRELKELAKE--P---LW--------PVV-------QAHPSAA-VFPGGESL 119 (204)
T ss_pred -----------CceECcccccCCCCeeCCcCHHHHhCc--H---HH--------HHH-------hcCcccC-CCCCCCCH
Confidence 444555788999999999887766432 0 11 011 1112111 23459999
Q ss_pred HHHHHHHHHHHHHHHhh-----CCCCcEEEEecCCCCC
Q 028163 179 AGARERYAQVIKALADK-----YPFEDLLLVTHGNLLS 211 (212)
Q Consensus 179 ~~~~~R~~~~l~~l~~~-----~~~~~vliVsH~~~i~ 211 (212)
.++..|+..+++.+... ..+++|||||||++|+
T Consensus 120 ~~~~~R~~~~l~~~~~~~~~~~~~~~~vliVsHg~~ir 157 (204)
T TIGR03848 120 AQVQARAVAAVREHDARLAAEHGPDAVWVACSHGDVIK 157 (204)
T ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCEEEEEeCChHHH
Confidence 99999999999998764 2457899999999985
No 16
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=99.97 E-value=5.2e-31 Score=212.51 Aligned_cols=180 Identities=18% Similarity=0.188 Sum_probs=123.4
Q ss_pred CccEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhcc
Q 028163 16 FYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCS 95 (212)
Q Consensus 16 ~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~ 95 (212)
++++||||||||+.+|..+.+.+. .|.+||+.|++||+.+++.|.. .+..++.|||||+.||+|||++++.....
T Consensus 3 ~m~~i~LVRHGqt~~n~~~~~~G~----~D~pLTe~G~~QA~~~a~~l~~-~~~~~~~IysSpl~Ra~qTA~~i~~~~~~ 77 (249)
T PRK14120 3 MTYTLVLLRHGESEWNAKNLFTGW----VDVDLTEKGEAEAKRGGELLAE-AGVLPDVVYTSLLRRAIRTANLALDAADR 77 (249)
T ss_pred CCcEEEEEeCCCCcccccCCcCCC----CCCCcCHHHHHHHHHHHHHHHh-cCCCCCEEEecChHHHHHHHHHHHHhccc
Confidence 348899999999999998888775 5889999999999999999983 34568999999999999999999764321
Q ss_pred CCCCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCC-CCCCCCChHHHHHhCCCCc-cCCCccccccc--C
Q 028163 96 VDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPK-DGDFGFVTSELEALLPAGT-VDSSVKQVYDQ--L 171 (212)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~--~ 171 (212)
. .+ ++...+.+.|+++|.|||+...++...++.. +..|..+.......++... +....++.+.. .
T Consensus 78 ~----------~~-~i~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~d~~~~~~~~ 146 (249)
T PRK14120 78 L----------WI-PVRRSWRLNERHYGALQGKDKAETKAEYGEEQFMLWRRSYDTPPPPIEDGSEYSQDNDPRYADLGV 146 (249)
T ss_pred C----------CC-CeEECCCcccccccccCCCCHHHHHHHccHHHHHHHHhccccCCCccccccccccccCccccccCC
Confidence 0 01 3344456899999999999888876654431 2222110000000000000 00000111111 1
Q ss_pred CCCcCCHHHHHHHHHHHHHHH-Hhh-CCCCcEEEEecCCCCC
Q 028163 172 PQWEETVAGARERYAQVIKAL-ADK-YPFEDLLLVTHGNLLS 211 (212)
Q Consensus 172 ~~~~Es~~~~~~R~~~~l~~l-~~~-~~~~~vliVsH~~~i~ 211 (212)
++++||+.++.+|+..+|+++ ... .++++|||||||++||
T Consensus 147 ~p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~iliVsHggvir 188 (249)
T PRK14120 147 GPRTECLKDVVARFLPYWEDDIVPDLKAGKTVLIAAHGNSLR 188 (249)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCEEEEEeCHHHHH
Confidence 356999999999999999985 332 3567899999999986
No 17
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.97 E-value=2.1e-30 Score=195.26 Aligned_cols=151 Identities=25% Similarity=0.315 Sum_probs=116.2
Q ss_pred EEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCCC
Q 028163 19 NVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVDD 98 (212)
Q Consensus 19 ~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~~ 98 (212)
+|||||||++.+|....+.+ ..|.+||+.|++||+.+++.|......+++.|||||+.||+|||+++...++.
T Consensus 1 ~i~lvRHG~s~~n~~~~~~g----~~d~~Lt~~G~~qa~~~a~~l~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~--- 73 (155)
T smart00855 1 RLYLIRHGETEANREGRLTG----WTDSPLTELGRAQAEALGELLASLGRLRFDVIYSSPLLRARETAEALAIALGL--- 73 (155)
T ss_pred CEEEEeCCCCcccccCeEcC----CCCCCCCHHHHHHHHHHHHHHHhccCCCCCEEEeCchHHHHHHHHHHHHhcCC---
Confidence 58999999999997776664 25899999999999999999983123579999999999999999999987753
Q ss_pred CCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCcccccccCCCCcCCH
Q 028163 99 DPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEETV 178 (212)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~Es~ 178 (212)
+ ...+.+.|+++|.++++...++... +|.....| +...++++||+
T Consensus 74 -----------~-~~~~~L~E~~~G~~~g~~~~~~~~~------------------~~~~~~~~-----~~~~~~~gEs~ 118 (155)
T smart00855 74 -----------G-EVDPRLRERDYGAWEGLTKEEERAK------------------AWTRPADW-----LGAAPPGGESL 118 (155)
T ss_pred -----------C-CCChhhhhcccceecCCcHHHHHHH------------------HHHHHhcc-----CCCCCcCCCCH
Confidence 2 1344678899999998766554322 22111122 12234459999
Q ss_pred HHHHHHHHHHHHHHHhhC--CCCcEEEEecCCCCC
Q 028163 179 AGARERYAQVIKALADKY--PFEDLLLVTHGNLLS 211 (212)
Q Consensus 179 ~~~~~R~~~~l~~l~~~~--~~~~vliVsH~~~i~ 211 (212)
.++..|+.++++.+...+ .+++|||||||++|+
T Consensus 119 ~~~~~Rv~~~~~~i~~~~~~~~~~vlvVtHg~~ir 153 (155)
T smart00855 119 ADVVERLVRALEELIATHDKSGQNVLIVSHGGVIR 153 (155)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCeEEEEECCcccc
Confidence 999999999999998653 467899999999997
No 18
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=99.97 E-value=1.4e-30 Score=222.08 Aligned_cols=165 Identities=21% Similarity=0.246 Sum_probs=128.4
Q ss_pred ccccccccCCccEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHH
Q 028163 7 TKAQSNDKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTA 86 (212)
Q Consensus 7 ~~~~~~~~~~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA 86 (212)
+++-.......++|||||||++.+|..+.+.+. .|++||+.|++||+.+++.|.. .. +++.|||||+.||+|||
T Consensus 161 ~~~~~~~~~~~~~i~LvRHGet~~n~~~~~~g~----~D~~Lt~~G~~QA~~l~~~l~~-~~-~~d~i~sSpl~Ra~qTA 234 (372)
T PRK07238 161 APGWTGARGTPTRLLLLRHGQTELSVQRRYSGR----GNPELTEVGRRQAAAAARYLAA-RG-GIDAVVSSPLQRARDTA 234 (372)
T ss_pred CCCCCCCCCCceEEEEEeCCCCCcccCCeeeCC----CCCCcCHHHHHHHHHHHHHHhc-cC-CCCEEEECChHHHHHHH
Confidence 344445566779999999999999988888774 4899999999999999999984 21 78999999999999999
Q ss_pred HHHHHHhccCCCCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCccc
Q 028163 87 YEVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQ 166 (212)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 166 (212)
+.+...++. ++...+.+.|+++|.+++++..++...++. ....|..++
T Consensus 235 ~~i~~~~~~--------------~~~~~~~L~E~~~G~~eg~~~~ei~~~~p~------------------~~~~w~~~~ 282 (372)
T PRK07238 235 AAAAKALGL--------------DVTVDDDLIETDFGAWEGLTFAEAAERDPE------------------LHRAWLADT 282 (372)
T ss_pred HHHHHhcCC--------------CcEECccceeCCCCccCCCCHHHHHHHCHH------------------HHHHHHhCC
Confidence 999987753 344445678999999998876655443322 111222222
Q ss_pred ccccCCCCcCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 167 VYDQLPQWEETVAGARERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 167 ~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
. ..++++||+.++..|+..++++|.....+++|+|||||++|+
T Consensus 283 ~--~~~p~gEs~~~~~~Rv~~~l~~l~~~~~~~~vlvVtHg~~ir 325 (372)
T PRK07238 283 S--VAPPGGESFDAVARRVRRARDRLIAEYPGATVLVVSHVTPIK 325 (372)
T ss_pred C--CCCcCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEEChHHHH
Confidence 2 124469999999999999999998777778999999999985
No 19
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.97 E-value=2.3e-31 Score=200.18 Aligned_cols=155 Identities=27% Similarity=0.350 Sum_probs=111.2
Q ss_pred EEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCCC
Q 028163 19 NVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVDD 98 (212)
Q Consensus 19 ~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~~ 98 (212)
+|||||||++.+|..+.+.+. .|++||+.|+.||+.+++.|. ..+.+++.|||||+.||+|||+++.+.++.
T Consensus 1 ~i~liRHg~~~~n~~~~~~~~----~d~~Lt~~G~~qA~~~~~~l~-~~~~~~~~i~~Sp~~R~~qTA~~~~~~~~~--- 72 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQGD----SDPPLTERGREQARQLGEYLA-ERDIQIDVIYSSPLRRCIQTAEIIAEGLGI--- 72 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCGTT----SSTGBEHHHHHHHHHHHHHHH-HTTSSCSEEEEESSHHHHHHHHHHHHHHTS---
T ss_pred CEEEEECCccccccCCCcCCC----CCccccHHHHHHHHhhccccc-ccccCceEEecCCcchhhhhhchhhccccc---
Confidence 699999999999977777664 467899999999999999998 356789999999999999999999987653
Q ss_pred CCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCcccccccCCCCcCCH
Q 028163 99 DPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWEETV 178 (212)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~Es~ 178 (212)
++...+.+.|+.+|.+++.+ ..++...|+.....|...+... .++++||+
T Consensus 73 -----------~~~~~~~l~E~~~g~~~g~~------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~Es~ 122 (158)
T PF00300_consen 73 -----------EIIVDPRLREIDFGDWEGRP------------------FDEIEEKFPDEFEAWWSDPYFY-RPPGGESW 122 (158)
T ss_dssp -----------EEEEEGGGSCCGCGGGTTSB------------------HHHHHHHHHHHHHHHHHHTSSC-GSTTSHHH
T ss_pred -----------ccccccccccccchhhcccc------------------hhhHHhhhhcccchhhcccccc-ccccCCCH
Confidence 22233334555555555443 3344444432111222222222 23358999
Q ss_pred HHHHHHHHHHHHHHHh-hCCCCcEEEEecCCCCC
Q 028163 179 AGARERYAQVIKALAD-KYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 179 ~~~~~R~~~~l~~l~~-~~~~~~vliVsH~~~i~ 211 (212)
.++..|+..++++|.. ..++++|||||||++|+
T Consensus 123 ~~~~~R~~~~~~~l~~~~~~~~~vliVsHg~~i~ 156 (158)
T PF00300_consen 123 EDFQQRVKQFLDELIAYKRPGENVLIVSHGGFIR 156 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSEEEEEE-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEEecHHHHH
Confidence 9999999999999996 55788999999999885
No 20
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.96 E-value=5.2e-29 Score=225.78 Aligned_cols=175 Identities=17% Similarity=0.135 Sum_probs=126.7
Q ss_pred ccccccCCccEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHH
Q 028163 9 AQSNDKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYE 88 (212)
Q Consensus 9 ~~~~~~~~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~ 88 (212)
.++|.+..+|+||||||||+.+|..++++| |++||+.|++||+.+++.|.......++.|||||+.||+|||++
T Consensus 411 ~l~n~~~~~m~i~LiRHGeT~~n~~~r~~G------d~pLt~~G~~qA~~l~~~l~~~~~~~~~~V~sSpl~Ra~~TA~~ 484 (664)
T PTZ00322 411 MLHNLNPTPMNLYLTRAGEYVDLLSGRIGG------NSRLTERGRAYSRALFEYFQKEISTTSFTVMSSCAKRCTETVHY 484 (664)
T ss_pred eeeeeccCCceEEEEecccchhhhcCccCC------CCccCHHHHHHHHHHHHHHHhccCCCCcEEEcCCcHHHHHHHHH
Confidence 467788888999999999999999999877 68999999999999999998422345679999999999999999
Q ss_pred HHHHhccC-C--C-CCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCc
Q 028163 89 VVSALCSV-D--D-DPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSV 164 (212)
Q Consensus 89 ~~~~l~~~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 164 (212)
+....... + . +..+....++ ++...+.+.|+++|.|||++..++... ||.....|..
T Consensus 485 i~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~L~Ei~fG~wEG~t~~ei~~~------------------~p~~~~~~~~ 545 (664)
T PTZ00322 485 FAEESILQQSTASAASSQSPSLNC-RVLYFPTLDDINHGDCEGQLLSDVRRT------------------MPNTLQSMKA 545 (664)
T ss_pred HHhccccccccccccccccccccc-cccchhhhCcCCCcccCCCCHHHHHHh------------------CcHHHHHHHh
Confidence 86532100 0 0 0000000112 344455788999999999766655444 3333333444
Q ss_pred ccccccCCCCcCCHHHHH-HHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 165 KQVYDQLPQWEETVAGAR-ERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 165 ~~~~~~~~~~~Es~~~~~-~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
+|....+| +|||+.++. +|+..++++|... .++|||||||++||
T Consensus 546 d~~~~~~P-~GES~~d~~~~R~~~~i~~l~~~--~~~ilvVsHg~vir 590 (664)
T PTZ00322 546 DPYYTAWP-NGECIHQVFNARLEPHIHDIQAS--TTPVLVVSHLHLLQ 590 (664)
T ss_pred CCCcCCCC-CCcCHHHHHHHHHHHHHHHHHcc--CCCEEEEeCcHHHH
Confidence 45444444 599999965 7999999999643 47899999999986
No 21
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.94 E-value=7.8e-27 Score=177.75 Aligned_cols=184 Identities=20% Similarity=0.211 Sum_probs=127.7
Q ss_pred ccccccccCCccEEEEEeCCCCCCCCCCccccCCC---CCCCCCCCHHHHHHHHHHHHHHHh-hcCCCCCEEEEccchhH
Q 028163 7 TKAQSNDKQFYQNVIVMRHGDRADNFEPLWVSTAA---RPWDPHIVEEGRVRAFCTGRRLRA-NLGFPIDRVFVSPFLRC 82 (212)
Q Consensus 7 ~~~~~~~~~~~~~i~lvRHGe~~~n~~~~~~~~~~---~~~D~~LT~~G~~qa~~l~~~l~~-~~~~~~~~i~~Spl~R~ 82 (212)
+.+.++++. .++||||||||..||+.+.-....+ ..+||-||+.|++|++.++.++.. .+.-+++.|++|||+||
T Consensus 5 ~i~l~t~~r-~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRt 83 (248)
T KOG4754|consen 5 GIGLYTKNR-CKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRT 83 (248)
T ss_pred ccCccccCc-ceEEEEEeccccccccCcccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHH
Confidence 566667776 7999999999999998766443322 245999999999999999999862 13345999999999999
Q ss_pred HHHHHHHHHHhccCCCCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCC
Q 028163 83 IQTAYEVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDS 162 (212)
Q Consensus 83 ~qTA~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 162 (212)
+|||.+.++.....+. .....+-+.+-+.+++...-. ..|.+. +.+..++.+.||...+..
T Consensus 84 LqT~v~~f~~~~~e~g--------------~~~~p~~vsp~~i~~~rE~lG--~hpCD~---r~~v~~~~~lfp~~DFs~ 144 (248)
T KOG4754|consen 84 LQTMVIAFGGYLAEDG--------------EDPAPVKVSPPFIAVCRETLG--DHPCDR---RSSVTDLMKLFPAYDFSL 144 (248)
T ss_pred HHHHHHHhcceeccCC--------------CcCCceeecchHHHHHHHHhC--CCcccc---cchhHHHHhhccccccee
Confidence 9999999987643211 111122233434333221100 001111 346788899999865443
Q ss_pred Cc-ccccccCCCCcCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 163 SV-KQVYDQLPQWEETVAGARERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 163 ~~-~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
.. +.+....|.+.|..+....|-+.+++++. +++.+.|.||||+++|+
T Consensus 145 ~~~dv~~~~~pdy~ed~e~~a~r~re~~~~l~-~r~ek~iavvths~fl~ 193 (248)
T KOG4754|consen 145 CETDVDPLKKPDYREDDEESAARSREFLEWLA-KRPEKEIAVVTHSGFLR 193 (248)
T ss_pred eccCcchhccCcchhhHHHHHHhHHHHHHHHH-hCccceEEEEEehHHHH
Confidence 32 11222235557999999999999999998 57889999999999986
No 22
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.94 E-value=7.7e-27 Score=181.40 Aligned_cols=164 Identities=21% Similarity=0.230 Sum_probs=129.1
Q ss_pred CccEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhcc
Q 028163 16 FYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCS 95 (212)
Q Consensus 16 ~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~ 95 (212)
...++++|||||+.||..+.++|+ .|.+||+.|..||..+++.|. ..+..++.+|||++.||.|||+.+.+..+.
T Consensus 4 ~~~~lvlvRHGes~wN~e~~~~G~----~D~~Lte~G~~qA~~~~~~l~-~~~~~~~~~~tS~l~RakqT~~~il~~~~~ 78 (214)
T KOG0235|consen 4 NTFRLVLVRHGESEWNKENIFQGW----IDAPLTEKGEEQAKAAAQRLK-DLNIEFDVCYTSDLKRAKQTAELILEELKQ 78 (214)
T ss_pred cceEEEEEecCchhhhhhCccccc----ccCccChhhHHHHHHHHHHHH-hcCCcccEEecCHHHHHHHHHHHHHHhhcc
Confidence 457899999999999999999996 588999999999999999999 567778999999999999999999998862
Q ss_pred CCCCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCcccccccCCCCc
Q 028163 96 VDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVYDQLPQWE 175 (212)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 175 (212)
..+ ++.....+.|..+|..+|++..+.....+.... ..++.+.......++.+
T Consensus 79 ----------~~~-pv~~~~~L~ER~yG~l~Gl~~~e~~~~~g~~~~----------------~~~~r~~~~~~~~~p~~ 131 (214)
T KOG0235|consen 79 ----------KKV-PVLYTWRLNERHYGDLQGLNKRETAKRYGEEQV----------------YEDPRLSDLDEIPLPDG 131 (214)
T ss_pred ----------CCc-ceEechhhchhhhccccCccHHHHHHHcchhcc----------------ccchhhccCCcCCCCCC
Confidence 112 666677889999999999877666554433210 12222322222345569
Q ss_pred CCHHHHHHHHHHHHHHHHhhC--CCCcEEEEecCCCCC
Q 028163 176 ETVAGARERYAQVIKALADKY--PFEDLLLVTHGNLLS 211 (212)
Q Consensus 176 Es~~~~~~R~~~~l~~l~~~~--~~~~vliVsH~~~i~ 211 (212)
||..++..|+..++++.+... .+++|+||+||.+||
T Consensus 132 EsL~~~~~R~~~~~~e~i~~~~~~gk~Vli~aHGnsLR 169 (214)
T KOG0235|consen 132 ESLKDCLDRLLPFWNEEIAKESKEGKNVLIVAHGNSLR 169 (214)
T ss_pred ccHHHHHHHHHHHHHHhhhhhhcCCcEEEEEcCcHHHH
Confidence 999999999999999776533 357899999999876
No 23
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1e-24 Score=174.14 Aligned_cols=172 Identities=39% Similarity=0.593 Sum_probs=137.6
Q ss_pred cCCccEEEEEeCCCCCCCCCCc-cccCCC--------------------------CCCCCCCCHHHHHHHHHHHHHHHhh
Q 028163 14 KQFYQNVIVMRHGDRADNFEPL-WVSTAA--------------------------RPWDPHIVEEGRVRAFCTGRRLRAN 66 (212)
Q Consensus 14 ~~~~~~i~lvRHGe~~~n~~~~-~~~~~~--------------------------~~~D~~LT~~G~~qa~~l~~~l~~~ 66 (212)
...+++|++|||||+.++..+. |...+. ...|+|||..|.-||+..|+.|. .
T Consensus 9 ~~~~~~i~vmRHgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~-~ 87 (272)
T KOG3734|consen 9 IDVPRNIFVMRHGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELL-N 87 (272)
T ss_pred cCCCceEEEEEcccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHH-h
Confidence 5567999999999999864444 443331 13499999999999999999998 6
Q ss_pred cCCCCCEEEEccchhHHHHHHHHHHHhccCCCCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCC
Q 028163 67 LGFPIDRVFVSPFLRCIQTAYEVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGF 146 (212)
Q Consensus 67 ~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~ 146 (212)
.+..++.|||||..||+|||..+.+.++. .......+++|+.|+..+.... .+..|
T Consensus 88 a~~~i~~ifcSPs~r~VqTa~~i~~~~g~-----------------e~~~~i~vePgL~e~~~~~~~~-----~~p~~-- 143 (272)
T KOG3734|consen 88 AGIAIDVIFCSPSLRCVQTAAKIKKGLGI-----------------EKKLKIRVEPGLFEPEKWPKDG-----KFPFF-- 143 (272)
T ss_pred cCCCcceeecCCchhHHHHHHHHHHhhch-----------------hcCeeEEecchhcchhhhcccC-----CCCCc--
Confidence 78889999999999999999999998863 2235688999999997554321 12333
Q ss_pred ChHHHHHhCCCCccCCCcccccccCCCCcCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 147 VTSELEALLPAGTVDSSVKQVYDQLPQWEETVAGARERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 147 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
.+..+..++.+.+|..|.|.+...+.++||.+++..|+..++..|+.+++++++|||+||..|.
T Consensus 144 -is~~el~~~~~~VD~~y~P~~~~~~~~~es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~~sv~ 207 (272)
T KOG3734|consen 144 -ISPDELKFPGFPVDLNYDPVYKETPRWGESLEDCNDRIQKVFKAIADKYPNENLLIVAHGSSVD 207 (272)
T ss_pred -CCHHHHhccCCCcccccchhhhhcccccccHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHH
Confidence 2334555666779999999886567779999999999999999999999999999999998763
No 24
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.92 E-value=7.2e-25 Score=175.88 Aligned_cols=164 Identities=21% Similarity=0.183 Sum_probs=111.1
Q ss_pred CCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCCCCCcccccCccc
Q 028163 30 DNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVDDDPTVMSSDAVV 109 (212)
Q Consensus 30 ~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~~~~~~~~~~~~~ 109 (212)
+|..++++|. .|++||+.|++||+.+++.|. ..+.+++.|||||+.||+|||+++.+.++.. .+
T Consensus 1 ~N~~~~~qG~----~D~pLTe~G~~QA~~l~~~L~-~~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~----------~~- 64 (236)
T PTZ00123 1 WNKENRFTGW----TDVPLSEKGVQEAREAGKLLK-EKGFRFDVVYTSVLKRAIKTAWIVLEELGQL----------HV- 64 (236)
T ss_pred CcccCceeCC----CCCCCCHHHHHHHHHHHHHHH-hcCCCCCEEEECChHHHHHHHHHHHHhcCCC----------CC-
Confidence 4666777775 589999999999999999998 3456799999999999999999999876420 01
Q ss_pred cCCCCceeeeeeccchhhhhhhhhhcCCCCCC-CCCCCCh-------HHHHHhCCCCccCCCcccccccCCCCcCCHHHH
Q 028163 110 SLDPSKVKVSIEYGLCEMLNREAIRHNMAPKD-GDFGFVT-------SELEALLPAGTVDSSVKQVYDQLPQWEETVAGA 181 (212)
Q Consensus 110 ~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~p~~~~~~~~~~~~~~~~~~~Es~~~~ 181 (212)
++...+.+.|+++|.|||+.+.++...++..+ ..|..+. ......||.....+. ... ...++++||+.++
T Consensus 65 ~~~~~~~L~E~~~G~~EG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~p~gES~~~~ 142 (236)
T PTZ00123 65 PVIKSWRLNERHYGALQGLNKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYK-DIP-KDALPNTECLKDT 142 (236)
T ss_pred CceeCchhhhcccccccCCCHHHHHHHccHHHHHHHhcccCCCCCCcccccccccccchhhh-ccc-cCCCCCCCCHHHH
Confidence 33445568999999999998888876544321 0110000 000011111000000 000 1134469999999
Q ss_pred HHHHHHHHHHHHhh--CCCCcEEEEecCCCCC
Q 028163 182 RERYAQVIKALADK--YPFEDLLLVTHGNLLS 211 (212)
Q Consensus 182 ~~R~~~~l~~l~~~--~~~~~vliVsH~~~i~ 211 (212)
..|+..+|++++.. ..+++|||||||++|+
T Consensus 143 ~~Rv~~~l~~li~~~~~~~~~vliVsHG~vir 174 (236)
T PTZ00123 143 VERVLPYWEDHIAPDILAGKKVLVAAHGNSLR 174 (236)
T ss_pred HHHHHHHHHHHHHHHhhCCCeEEEEeCHHHHH
Confidence 99999999987532 3467899999999985
No 25
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.90 E-value=6.6e-24 Score=162.38 Aligned_cols=176 Identities=20% Similarity=0.203 Sum_probs=127.1
Q ss_pred cEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhccCC
Q 028163 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALCSVD 97 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~~~~ 97 (212)
++|+|+|||||.||..+.|.|+ .|.+||+.|+.||...|+.|+ +.+..+|.+|||-+.||++|++++..+++..
T Consensus 2 ~~Lvl~RHGqSeWN~~NlFtGW----~Dv~LtekG~~EA~~ag~llk-~~~~~~dia~TS~L~RAi~T~~i~L~e~d~~- 75 (230)
T COG0588 2 MKLVLLRHGQSEWNKENLFTGW----VDVDLTEKGISEAKAAGKLLK-EEGLEFDIAYTSVLKRAIKTLNIVLEESDQL- 75 (230)
T ss_pred ceEEEEecCchhhhhcCceeee----eecCcchhhHHHHHHHHHHHH-HcCCCcceeehHHHHHHHHHHHHHhhhhccc-
Confidence 6899999999999999999996 699999999999999999999 6889999999999999999999999887531
Q ss_pred CCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCC-CCCCCCCC----hHHH---HHhCCCCccCCCcccccc
Q 028163 98 DDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAP-KDGDFGFV----TSEL---EALLPAGTVDSSVKQVYD 169 (212)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~-~~~~~~~~----~~~~---~~~~p~~~~~~~~~~~~~ 169 (212)
.+ ++.....+.|..+|.+.|++..+....+.. .+..|..+ ++.+ .+.+|. .+-.|...-.
T Consensus 76 ---------~i-pv~kswrLNERhYG~LqGlnK~~t~~kyGeeqv~~wRRsydi~PP~~~~~~~~~~~--~d~ry~~~~~ 143 (230)
T COG0588 76 ---------WI-PVIKSWRLNERHYGALQGLNKAETAAKYGEEQVLIWRRSYDIPPPKLEKDDERSPH--RDRRYAHLDI 143 (230)
T ss_pred ---------Cc-chhhHHHhhhhhhhhhhcCChHHHHHHHhHHHHHHHHHhcCCCCCCcccccccccc--cccccccccc
Confidence 22 666677899999999999887766543322 11122111 0000 000110 0111110000
Q ss_pred cCCCCcCCHHHHHHHHHHHHHHHHhh--CCCCcEEEEecCCCCC
Q 028163 170 QLPQWEETVAGARERYAQVIKALADK--YPFEDLLLVTHGNLLS 211 (212)
Q Consensus 170 ~~~~~~Es~~~~~~R~~~~l~~l~~~--~~~~~vliVsH~~~i~ 211 (212)
..-+..||..+..+|+..+++..+.. ..+++|+||+||.+||
T Consensus 144 ~~~p~~EsLkdt~~Rv~Pyw~~~I~p~l~~Gk~VlI~AHGNSlR 187 (230)
T COG0588 144 GGLPLTESLKDTVERVLPYWEDDIAPNLKSGKNVLIVAHGNSLR 187 (230)
T ss_pred cCCCccchHHHHHHHhhHHHHHHhhHHHhCCCeEEEEecchhHH
Confidence 11113699999999999999776542 2478999999999987
No 26
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.90 E-value=6.2e-23 Score=169.42 Aligned_cols=134 Identities=20% Similarity=0.273 Sum_probs=93.4
Q ss_pred CccEEEEEeCCCCCCCCCCccccCCCCCCCC---CCCHHHHHHHHHHHHHHHhhc-----CCCCCEEEEccchhHHHHHH
Q 028163 16 FYQNVIVMRHGDRADNFEPLWVSTAARPWDP---HIVEEGRVRAFCTGRRLRANL-----GFPIDRVFVSPFLRCIQTAY 87 (212)
Q Consensus 16 ~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~---~LT~~G~~qa~~l~~~l~~~~-----~~~~~~i~~Spl~R~~qTA~ 87 (212)
..++||||||||+.++. . .|. +||+.|++||+.+++.|.... +.+++.||||||.||+|||+
T Consensus 101 ~~~~L~LVRHGq~~~~~------~----~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAe 170 (299)
T PTZ00122 101 HQRQIILVRHGQYINES------S----NDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAE 170 (299)
T ss_pred ceeEEEEEECCCCCCCC------C----CCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHH
Confidence 34999999999964331 1 233 599999999999999998421 12799999999999999999
Q ss_pred HHHHHhccCCCCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCcccc
Q 028163 88 EVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQV 167 (212)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 167 (212)
+|.+.+.. ..+.+++++.|+...... |. +.
T Consensus 171 iIa~~~~~--------------------~~v~~d~~LrEG~~~~~~----------------------~~--------~~ 200 (299)
T PTZ00122 171 IISEAFPG--------------------VRLIEDPNLAEGVPCAPD----------------------PP--------SR 200 (299)
T ss_pred HHHHhCCC--------------------CCceeCcccccCCccccC----------------------cc--------cc
Confidence 99876521 124567777776421100 00 00
Q ss_pred cccCCCCcCCHHHHHHHHHHHHHHHHhhCC---CCcEEEEecCCCCC
Q 028163 168 YDQLPQWEETVAGARERYAQVIKALADKYP---FEDLLLVTHGNLLS 211 (212)
Q Consensus 168 ~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~---~~~vliVsH~~~i~ 211 (212)
...++ +|...+..+|+.++++++..... ++.+||||||++||
T Consensus 201 -~~~~~-gee~~~~~~Rv~~al~~i~~r~~~~~~~~vLVVsHGgvIR 245 (299)
T PTZ00122 201 -GFKPT-IEEILEDMKRIEAAFEKYFHRPVEDEDSVEIIVCHGNVIR 245 (299)
T ss_pred -ccCCC-cchHHHHHHHHHHHHHHHHHhcccCCCCeEEEEeCChHHH
Confidence 01233 34446779999999999986543 35689999999986
No 27
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.89 E-value=1.8e-22 Score=151.47 Aligned_cols=70 Identities=36% Similarity=0.538 Sum_probs=59.9
Q ss_pred EEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHh
Q 028163 19 NVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSAL 93 (212)
Q Consensus 19 ~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l 93 (212)
+|||||||++.+|......+ ..|.+||+.|++||+.+++.|.. .+.+++.|||||+.||+|||+.+.+.+
T Consensus 1 ~i~liRHg~~~~~~~~~~~~----~~d~~Lt~~G~~qa~~~~~~l~~-~~~~~~~i~~Sp~~Ra~qTa~~l~~~~ 70 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQG----WTDVPLTEKGREQARALGKRLKE-LGIKFDRIYSSPLKRAIQTAEIILEEL 70 (153)
T ss_pred CEEEEECCCCcccccCcccC----CCCCCCCHHHHHHHHHHHHHHHh-cCCCCCEEEECcHHHHHHHHHHHHHhc
Confidence 58999999999886654333 35899999999999999999983 445799999999999999999998764
No 28
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.83 E-value=5.1e-20 Score=137.62 Aligned_cols=70 Identities=34% Similarity=0.469 Sum_probs=60.0
Q ss_pred EEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHh
Q 028163 19 NVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSAL 93 (212)
Q Consensus 19 ~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l 93 (212)
+|||||||++.++....+.+ ..|.+||+.|++||+.++..|.. ...+++.|||||+.||+|||+++...+
T Consensus 1 ~i~liRHg~~~~~~~~~~~~----~~d~~Lt~~G~~qa~~l~~~l~~-~~~~~~~v~sSp~~R~~~Ta~~~~~~~ 70 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFTG----WGDGPLTEKGRQQARELGKALRE-RYIKFDRIYSSPLKRAIQTAEIILEGL 70 (153)
T ss_pred CEEEEeCCCCccccCCCccC----CCCCCcCHHHHHHHHHHHHHHHH-hCCCCCEEEECChHHHHHHHHHHHHHh
Confidence 48999999999886655444 25889999999999999999984 334799999999999999999999775
No 29
>PRK06193 hypothetical protein; Provisional
Probab=99.82 E-value=6.4e-20 Score=143.10 Aligned_cols=135 Identities=24% Similarity=0.224 Sum_probs=99.0
Q ss_pred cccccccCCccEEEEEeCCCCCCCCCCccccCCC-CCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHH
Q 028163 8 KAQSNDKQFYQNVIVMRHGDRADNFEPLWVSTAA-RPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTA 86 (212)
Q Consensus 8 ~~~~~~~~~~~~i~lvRHGe~~~n~~~~~~~~~~-~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA 86 (212)
+........+..|||||||++.+|....+.++.. ...|.+||+.|++||+.++++|. ..+..++.|||||+.||+|||
T Consensus 33 ~~~~~~l~~~~~L~LvRHGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~-~~~~~~d~V~sSpl~Ra~qTA 111 (206)
T PRK06193 33 KTLLESLQKGGYVIYFRHAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIGEAFR-ALAIPVGKVISSPYCRAWETA 111 (206)
T ss_pred hHHHHHHhcCCEEEEEeCccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHHHHHH-hcCCCCCEEEECCcHHHHHHH
Confidence 4466777888999999999998887666555421 11256999999999999999998 456789999999999999999
Q ss_pred HHHHHHhccCCCCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCccc
Q 028163 87 YEVVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQ 166 (212)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 166 (212)
++++..... ... + .| ++
T Consensus 112 ~il~~~~~~-------------------------~~~-----------------l-~~----------~~---------- 128 (206)
T PRK06193 112 QLAFGRHEK-------------------------EIR-----------------L-NF----------LN---------- 128 (206)
T ss_pred HHHhccccc-------------------------Ccc-----------------c-cc----------cc----------
Confidence 988743210 000 0 00 00
Q ss_pred ccccCCCCcCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 167 VYDQLPQWEETVAGARERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 167 ~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
...+ ..|+.+.+..|+..+++.+- ...++|+||+|+..|+
T Consensus 129 --~~~~-~~~~~~~y~~~l~~~I~~l~--~~~~~vLlVgHnp~i~ 168 (206)
T PRK06193 129 --SEPV-PAERNALLKAGLRPLLTTPP--DPGTNTVLVGHDDNLE 168 (206)
T ss_pred --ccCC-ChhhHHHHHHHHHHHHhhCC--CCCCeEEEEeCchHHH
Confidence 0001 24788888899999999885 4567899999998765
No 30
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.81 E-value=7.9e-19 Score=131.79 Aligned_cols=68 Identities=32% Similarity=0.410 Sum_probs=58.8
Q ss_pred cEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhc
Q 028163 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALC 94 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~ 94 (212)
|+|||||||++.++.. + ..|.+||+.|++||+.++..|. ..+..++.|||||+.||+|||+.+.+.++
T Consensus 1 m~l~LvRHg~a~~~~~----~----d~dr~Lt~~G~~qa~~~~~~l~-~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~ 68 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA----S----DSVRPLTTNGCDESRLVAQWLK-GQGVEIERILVSPFVRAEQTAEIVGDCLN 68 (152)
T ss_pred CEEEEEeCCCcccccC----C----CCCCCcCHHHHHHHHHHHHHHH-hCCCCCCEEEECCcHHHHHHHHHHHHHcC
Confidence 6899999999987654 2 2477999999999999999998 45567899999999999999999988764
No 31
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.77 E-value=5.8e-18 Score=127.92 Aligned_cols=68 Identities=32% Similarity=0.339 Sum_probs=57.9
Q ss_pred cEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhc
Q 028163 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALC 94 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~ 94 (212)
|+|||||||++.++.. + ..|.+||+.|++||+.++.+|. ..+..++.|||||+.||+|||+++...++
T Consensus 1 m~l~lvRHg~a~~~~~----~----d~~rpLt~~G~~qa~~~~~~l~-~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~ 68 (159)
T PRK10848 1 MQVFIMRHGDAALDAA----S----DSVRPLTTCGCDESRLMANWLK-GQKVDIERVLVSPYLRAEQTLEVVGECLN 68 (159)
T ss_pred CEEEEEeCCCCCCCCC----C----CcCCCcCHHHHHHHHHHHHHHH-hCCCCCCEEEECCHHHHHHHHHHHHHHhC
Confidence 6899999999987642 1 2367999999999999999998 35567899999999999999999987654
No 32
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.74 E-value=5.1e-18 Score=143.21 Aligned_cols=158 Identities=23% Similarity=0.218 Sum_probs=121.5
Q ss_pred ccccccCCccEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHH
Q 028163 9 AQSNDKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYE 88 (212)
Q Consensus 9 ~~~~~~~~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~ 88 (212)
.+||....+..|||.||||+.+|+.++..+ |.+|++.|.+-|+.+.+.+.. ....-..||||++.||+|||..
T Consensus 231 ~lmN~~~~pR~i~l~r~geS~~n~~grigg------ds~ls~~g~~ya~~l~~f~~~-~~~~dl~vwts~~~rti~ta~~ 303 (438)
T KOG0234|consen 231 YLMNIHTTPRTIYLTRHGESEFNVEGRIGG------DSPLSERGSQYAKSLIKFVEE-QSSSDLDVWTSQRKRTIQTAEG 303 (438)
T ss_pred hhhccccCCceEEEEecCCCccccccccCC------cccccHHHHHHHHHHHHHHhh-hcccCceeccchHHHHhhhHhh
Confidence 467888889999999999999999988877 789999999999999999884 2222247999999999999993
Q ss_pred HHHHhccCCCCCcccccCccccCCCCceeeeeeccchhhhhhhhhhcCCCCCCCCCCCChHHHHHhCCCCccCCCccccc
Q 028163 89 VVSALCSVDDDPTVMSSDAVVSLDPSKVKVSIEYGLCEMLNREAIRHNMAPKDGDFGFVTSELEALLPAGTVDSSVKQVY 168 (212)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 168 (212)
+.-.. .+.....+.+++.|.+++++..++...+|..+ ..-..++..
T Consensus 304 l~~~~----------------~~~~~~~Ldei~ag~~~g~t~eeI~~~~p~e~------------------~~r~~dky~ 349 (438)
T KOG0234|consen 304 LKLDY----------------SVEQWKALDEIDAGVCEGLTYEEIETNYPEEF------------------ALRDKDKYR 349 (438)
T ss_pred cCcch----------------hhhhHhhcCcccccccccccHHHHHHhCchhh------------------hhccCCcce
Confidence 33221 22344467899999999987666665554432 222224455
Q ss_pred ccCCCCcCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 169 DQLPQWEETVAGARERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 169 ~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
+..|. |||+.|+.+|++.++-+|... .+|+||||..+||
T Consensus 350 yry~~-gESy~D~v~RlePvImElEr~---~~Vlvi~Hqavir 388 (438)
T KOG0234|consen 350 YRYPG-GESYSDLVQRLEPVIMELERQ---ENVLVITHQAVIR 388 (438)
T ss_pred eecCC-CCCHHHHHHhhhhHhHhhhhc---ccEEEEecHHHHH
Confidence 55664 999999999999999999743 4599999998875
No 33
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.73 E-value=3e-17 Score=127.11 Aligned_cols=73 Identities=22% Similarity=0.195 Sum_probs=54.3
Q ss_pred cccCCccEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHH
Q 028163 12 NDKQFYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVS 91 (212)
Q Consensus 12 ~~~~~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~ 91 (212)
......++||||||||+.+... +.... .+-+||+.|++||+.++++|.. .. ..+.|||||+.||+|||+++..
T Consensus 49 ~~~~~~~~L~LiRHGet~~~~~----~~~~s-D~RpLTerG~~qA~~lg~~L~~-~~-~~d~I~sSpa~Ra~qTAe~ia~ 121 (201)
T PRK15416 49 ELAKQHPVVVLFRHAERCDRSD----NQCLS-DKTGITVKGTQDARELGKAFSA-DI-PDYDLYSSNTVRTIQSATWFSA 121 (201)
T ss_pred HHhcCCCEEEEEeCccccCccC----CCCCC-CCCCCCHHHHHHHHHHHHHHhC-CC-CCCEEEECCCHHHHHHHHHHhc
Confidence 4456679999999999732111 11111 1258999999999999999983 22 2389999999999999999875
No 34
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.64 E-value=1e-15 Score=114.78 Aligned_cols=71 Identities=31% Similarity=0.315 Sum_probs=61.5
Q ss_pred ccEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhc
Q 028163 17 YQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALC 94 (212)
Q Consensus 17 ~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~ 94 (212)
+|+|||+|||++.+...+.- ..|-+||+.|+++++..+++|. ..+..+|.|+|||+.||+|||+.+...++
T Consensus 1 m~~L~LmRHgkA~~~~~~~~------D~dR~Lt~~G~~ea~~~a~~L~-~~~~~~D~VL~Spa~Ra~QTae~v~~~~~ 71 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPGIA------DFDRPLTERGRKEAELVAAWLA-GQGVEPDLVLVSPAVRARQTAEIVAEHLG 71 (163)
T ss_pred CceEEEeecccccccCCCCC------CccCcCCHHHHHHHHHHHHHHH-hcCCCCCEEEeChhHHHHHHHHHHHHhhC
Confidence 48999999999988755411 1356999999999999999999 57778999999999999999999998875
No 35
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.63 E-value=2.4e-15 Score=115.27 Aligned_cols=67 Identities=31% Similarity=0.497 Sum_probs=57.9
Q ss_pred CccEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHHHhc
Q 028163 16 FYQNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLGFPIDRVFVSPFLRCIQTAYEVVSALC 94 (212)
Q Consensus 16 ~~~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~~~~~~i~~Spl~R~~qTA~~~~~~l~ 94 (212)
....||||||||.-.. +. -..||+.|++||+.+|++|. +.+.+++.|..|.|.||.+||.+|.+.+.
T Consensus 93 atRhI~LiRHgeY~~~------g~-----~~hLTelGReQAE~tGkRL~-elglk~d~vv~StM~RA~ETadIIlk~l~ 159 (284)
T KOG4609|consen 93 ATRHIFLIRHGEYHVD------GS-----LEHLTELGREQAELTGKRLA-ELGLKFDKVVASTMVRATETADIILKHLP 159 (284)
T ss_pred hhceEEEEeccceecc------Cc-----hhhcchhhHHHHHHHhHHHH-HcCCchhhhhhhhhhhhHHHHHHHHHhCC
Confidence 4588999999997321 11 12799999999999999999 69999999999999999999999999874
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=98.34 E-value=1.2e-06 Score=70.48 Aligned_cols=62 Identities=31% Similarity=0.362 Sum_probs=50.7
Q ss_pred cEEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcC---------CCCCEEEEccchhHHHHHHH
Q 028163 18 QNVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLG---------FPIDRVFVSPFLRCIQTAYE 88 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~---------~~~~~i~~Spl~R~~qTA~~ 88 (212)
+.++++|||++.- + .||..|++|+..+|+++..... ...-.|++|+..||+|||+.
T Consensus 4 ~v~~~~RHg~r~p-------~--------~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~ 68 (242)
T cd07061 4 QVQVLSRHGDRYP-------G--------ELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQA 68 (242)
T ss_pred EEEEEEecCCCCc-------h--------hhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHH
Confidence 5689999999832 2 6999999999999999975221 12346889999999999999
Q ss_pred HHHHhc
Q 028163 89 VVSALC 94 (212)
Q Consensus 89 ~~~~l~ 94 (212)
+..++-
T Consensus 69 ~~~gl~ 74 (242)
T cd07061 69 FLAGLF 74 (242)
T ss_pred HHHhcC
Confidence 999875
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=97.60 E-value=0.00031 Score=58.77 Aligned_cols=48 Identities=23% Similarity=0.275 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHHHHHHHHhhcC-C-------CCCEEEEccchhHHHHHHHHHHHhc
Q 028163 47 HIVEEGRVRAFCTGRRLRANLG-F-------PIDRVFVSPFLRCIQTAYEVVSALC 94 (212)
Q Consensus 47 ~LT~~G~~qa~~l~~~l~~~~~-~-------~~~~i~~Spl~R~~qTA~~~~~~l~ 94 (212)
.||+.|.+|...+|+.+..... . .--.|++|...||++||+.++.++-
T Consensus 62 ~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl~ 117 (347)
T PF00328_consen 62 QLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGLY 117 (347)
T ss_dssp SBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHHS
T ss_pred cccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHHh
Confidence 5999999999999999975321 1 2234889999999999999999885
No 38
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=97.01 E-value=0.0034 Score=54.54 Aligned_cols=76 Identities=26% Similarity=0.458 Sum_probs=51.1
Q ss_pred cEEEEEeCCCCCC--C---CCCccccC-CCCCCCCCCCHHHHHHHHHHHHHHHh---hcC------CCCC--EEEEccch
Q 028163 18 QNVIVMRHGDRAD--N---FEPLWVST-AARPWDPHIVEEGRVRAFCTGRRLRA---NLG------FPID--RVFVSPFL 80 (212)
Q Consensus 18 ~~i~lvRHGe~~~--n---~~~~~~~~-~~~~~D~~LT~~G~~qa~~l~~~l~~---~~~------~~~~--~i~~Spl~ 80 (212)
..-.+-|||.+.- . .+...... .++.+ -.||+.|.+|+..||+.|+. ..+ .+.. .|.||+.-
T Consensus 36 fv~~i~RHGdRaP~~~~yp~dp~~~~~~~~~G~-GqLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~n 114 (411)
T KOG3720|consen 36 FVQVIFRHGDRAPVDTPYPLDPFKEEDFWPRGW-GQLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDVN 114 (411)
T ss_pred EEEEEeecCCCCcccCCCCCCcccccccCCCCc-chhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCcc
Confidence 5566779999862 1 11111110 11111 37999999999999999986 222 1122 26699999
Q ss_pred hHHHHHHHHHHHhc
Q 028163 81 RCIQTAYEVVSALC 94 (212)
Q Consensus 81 R~~qTA~~~~~~l~ 94 (212)
||+.||+.++.++-
T Consensus 115 Rtl~SAqs~laGlf 128 (411)
T KOG3720|consen 115 RTLMSAQSVLAGLF 128 (411)
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999998875
No 39
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=96.51 E-value=0.016 Score=50.47 Aligned_cols=75 Identities=20% Similarity=0.262 Sum_probs=50.7
Q ss_pred cEEEEEeCCCCCCCCC----------CccccCCCCCCCCCCCHHHHHHHHHHHHHHHhh---cCC-------CC--CEEE
Q 028163 18 QNVIVMRHGDRADNFE----------PLWVSTAARPWDPHIVEEGRVRAFCTGRRLRAN---LGF-------PI--DRVF 75 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~----------~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~---~~~-------~~--~~i~ 75 (212)
+.++|.|||-+.-... ..|..+.- ..-.||.+|..+...+|+.+.+- .+. .+ -.||
T Consensus 33 ~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~w~~--~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~ 110 (413)
T PRK10173 33 QVLMMSRHNLRAPLANNGSVLEQSTPNAWPEWDV--PGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAY 110 (413)
T ss_pred EEEEEeecccCCCCCCcchhhhhcCCCCCCCCCC--CcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEE
Confidence 7799999998853321 12222211 13479999999988888866531 111 12 2377
Q ss_pred EccchhHHHHHHHHHHHhc
Q 028163 76 VSPFLRCIQTAYEVVSALC 94 (212)
Q Consensus 76 ~Spl~R~~qTA~~~~~~l~ 94 (212)
+++..||++||+.++.++-
T Consensus 111 a~~~~RT~~Sa~afl~Gl~ 129 (413)
T PRK10173 111 ANSLQRTVATAQFFITGAF 129 (413)
T ss_pred eCCchHHHHHHHHHHHhcC
Confidence 8999999999999988764
No 40
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=95.91 E-value=0.061 Score=47.01 Aligned_cols=75 Identities=21% Similarity=0.189 Sum_probs=49.8
Q ss_pred cEEEEEeCCCCCCCCC---------CccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcC---C-------CCC--EEEE
Q 028163 18 QNVIVMRHGDRADNFE---------PLWVSTAARPWDPHIVEEGRVRAFCTGRRLRANLG---F-------PID--RVFV 76 (212)
Q Consensus 18 ~~i~lvRHGe~~~n~~---------~~~~~~~~~~~D~~LT~~G~~qa~~l~~~l~~~~~---~-------~~~--~i~~ 76 (212)
+.++|-|||-+.-... ..|..+..+ .-.||.+|..|...+|+.+.+-+. + ..+ .|++
T Consensus 36 ~Vvil~RHG~RaP~~~~~~~~~~t~~~w~~W~~~--~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a 113 (436)
T PRK10172 36 SVVIVSRHGVRAPTKATQLMQDVTPDAWPQWPVK--LGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIA 113 (436)
T ss_pred EEEEEeeCCCCCCCCCCcccccCCCCCCCCCCCC--cchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEe
Confidence 6688999999853211 112111111 247999999999999997764221 1 122 3667
Q ss_pred ccchhHHHHHHHHHHHhc
Q 028163 77 SPFLRCIQTAYEVVSALC 94 (212)
Q Consensus 77 Spl~R~~qTA~~~~~~l~ 94 (212)
++..||+.||+.++.++-
T Consensus 114 ~~~~RTi~SAqafl~Gly 131 (436)
T PRK10172 114 DVDQRTRKTGEAFLAGLA 131 (436)
T ss_pred CCchHHHHHHHHHHHhcC
Confidence 888999999999988774
No 41
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=93.43 E-value=0.14 Score=47.23 Aligned_cols=49 Identities=22% Similarity=0.200 Sum_probs=39.5
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcC--C-----------C-CCEEEEccchhHHHHHHHHHHHhc
Q 028163 46 PHIVEEGRVRAFCTGRRLRANLG--F-----------P-IDRVFVSPFLRCIQTAYEVVSALC 94 (212)
Q Consensus 46 ~~LT~~G~~qa~~l~~~l~~~~~--~-----------~-~~~i~~Spl~R~~qTA~~~~~~l~ 94 (212)
-.||..|+-||+.||+.+..... . . --.||+|.-.|.+-||+++++++-
T Consensus 510 GelT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgLL 572 (1018)
T KOG1057|consen 510 GELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLL 572 (1018)
T ss_pred CEecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHHH
Confidence 37999999999999999985321 0 1 123999999999999999999873
No 42
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=88.26 E-value=1.4 Score=38.61 Aligned_cols=50 Identities=20% Similarity=0.196 Sum_probs=39.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhc----CCCCCEEEEccchhHHHHHHHHHHHhc
Q 028163 45 DPHIVEEGRVRAFCTGRRLRANL----GFPIDRVFVSPFLRCIQTAYEVVSALC 94 (212)
Q Consensus 45 D~~LT~~G~~qa~~l~~~l~~~~----~~~~~~i~~Spl~R~~qTA~~~~~~l~ 94 (212)
+-.|...|+..+.++++.+.... +.....|+++-..||.+||+.+..+|.
T Consensus 130 ~~~l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GLf 183 (467)
T KOG1382|consen 130 VDQLEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGLF 183 (467)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhhc
Confidence 45677888888988888876432 334556999999999999999999886
No 43
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=78.76 E-value=2.1 Score=32.92 Aligned_cols=32 Identities=25% Similarity=0.305 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHHHHHhhCCCCcEEEEecCC
Q 028163 177 TVAGARERYAQVIKALADKYPFEDLLLVTHGN 208 (212)
Q Consensus 177 s~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~ 208 (212)
+.+++.+|+..|++.|.+.+++..||+|+|-.
T Consensus 72 ~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~ 103 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAHPDTPILLVSPIP 103 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT-SSS-EEEEE---
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 45689999999999999999999999999743
No 44
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=77.70 E-value=3.7 Score=33.49 Aligned_cols=36 Identities=19% Similarity=0.354 Sum_probs=26.7
Q ss_pred cCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCCCC
Q 028163 175 EETVAGARERYAQVIKALADKYPFEDLLLVTHGNLLSD 212 (212)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~~ 212 (212)
+.|.++..+++++..+...+ -..+|++.+|||.|.+
T Consensus 191 ~~sl~~a~~~~~~i~~aa~~--v~~dii~l~hGGPI~~ 226 (268)
T PF09370_consen 191 ALSLEEAAERIQEIFDAARA--VNPDIIVLCHGGPIAT 226 (268)
T ss_dssp S--HHHHHHHHHHHHHHHHC--C-TT-EEEEECTTB-S
T ss_pred cCCHHHHHHHHHHHHHHHHH--hCCCeEEEEeCCCCCC
Confidence 57899999999999998764 3678999999999864
No 45
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=50.25 E-value=31 Score=31.73 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=28.6
Q ss_pred cCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecC
Q 028163 175 EETVAGARERYAQVIKALADKYPFEDLLLVTHG 207 (212)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~ 207 (212)
.|...++..|+++.++.+.....++.|+||+|.
T Consensus 189 le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HS 221 (642)
T PLN02517 189 TEVRDQTLSRLKSNIELMVATNGGKKVVVVPHS 221 (642)
T ss_pred hhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 477899999999999999876557889999996
No 46
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=47.67 E-value=4.3 Score=33.26 Aligned_cols=50 Identities=30% Similarity=0.476 Sum_probs=41.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCCCCCE-EEEccchhHHHHHHHHHHHhc
Q 028163 45 DPHIVEEGRVRAFCTGRRLRANLGFPIDR-VFVSPFLRCIQTAYEVVSALC 94 (212)
Q Consensus 45 D~~LT~~G~~qa~~l~~~l~~~~~~~~~~-i~~Spl~R~~qTA~~~~~~l~ 94 (212)
|+++.+.|..-+.++.++.....+.++|. |..|+..+|.+||..+..+.-
T Consensus 40 ~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a~~ 90 (272)
T KOG3734|consen 40 DGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNAGI 90 (272)
T ss_pred CCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhcCC
Confidence 47788888888888888876556788888 999999999999999987653
No 47
>PF01244 Peptidase_M19: Membrane dipeptidase (Peptidase family M19); InterPro: IPR008257 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of peptidases belong to the MEROPS peptidase family M19 (membrane dipeptidase family, clan MJ). The protein fold of the peptidase domain for members of this family resembles that of Klebsiella urease, the type example for clan MJ. Renal dipeptidase (rDP) (3.4.13.19 from EC), also known as microsomal dipeptidase, is a zinc-dependent metalloenzyme that hydrolyzes a wide range of dipeptides. It is involved in renal metabolism of glutathione and its conjugates. It is a homodimeric disulphide-linked glycoprotein attached to the renal brush border microvilli membrane by a GPI-anchor. A glutamate residue has recently been shown [,] to be important for the catalytic activity of rDP. rDP seems to be evolutionary related to hypothetical proteins in the PQQ biosynthesis operons of Acinetobacter calcoaceticus and Klebsiella pneumoniae.; GO: 0008235 metalloexopeptidase activity, 0008239 dipeptidyl-peptidase activity, 0016805 dipeptidase activity, 0006508 proteolysis; PDB: 3NEH_B 2RAG_D 3LU2_A 3B40_A 3LY0_A 3FDG_B 2I5G_B 3S2J_A 3S2N_A 3S2L_A ....
Probab=47.62 E-value=27 Score=29.42 Aligned_cols=39 Identities=18% Similarity=0.093 Sum_probs=28.4
Q ss_pred EeCCCCCCCCCCccccCCCCC--CCCCCCHHHHHHHHHHHH
Q 028163 23 MRHGDRADNFEPLWVSTAARP--WDPHIVEEGRVRAFCTGR 61 (212)
Q Consensus 23 vRHGe~~~n~~~~~~~~~~~~--~D~~LT~~G~~qa~~l~~ 61 (212)
||+-.-.||..+.+.+.+... .+.+||+.|++-.+++.+
T Consensus 131 vR~~~Lt~n~~N~~a~g~~~~~~~~~GLT~~G~~vV~~mn~ 171 (320)
T PF01244_consen 131 VRYIGLTWNYRNELADGCGEPGNRDGGLTPFGREVVREMNR 171 (320)
T ss_dssp EEEEES-SSSBBSSBBBTTSTTTTSSSB-HHHHHHHHHHHH
T ss_pred CEEEEEeecCCCccccccccccccCCCcChHHHHHHHHHHH
Confidence 577777788777777666555 689999999998887764
No 48
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=46.43 E-value=36 Score=27.60 Aligned_cols=28 Identities=25% Similarity=0.415 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcEEEEecC
Q 028163 178 VAGARERYAQVIKALADKYPFEDLLLVTHG 207 (212)
Q Consensus 178 ~~~~~~R~~~~l~~l~~~~~~~~vliVsH~ 207 (212)
.+.|++++..-+.++..+ +.+|++|||.
T Consensus 179 D~~F~~K~~~rl~e~~~~--~~tiv~VSHd 206 (249)
T COG1134 179 DAAFQEKCLERLNELVEK--NKTIVLVSHD 206 (249)
T ss_pred CHHHHHHHHHHHHHHHHc--CCEEEEEECC
Confidence 467888888888888654 5899999996
No 49
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=44.24 E-value=38 Score=28.37 Aligned_cols=29 Identities=17% Similarity=0.214 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEecCC
Q 028163 179 AGARERYAQVIKALADKYPFEDLLLVTHGN 208 (212)
Q Consensus 179 ~~~~~R~~~~l~~l~~~~~~~~vliVsH~~ 208 (212)
..+..|+..++..+. .++.++|+||+||.
T Consensus 174 ~~~~ari~Aa~~~~~-~~~~~~ivlIg~G~ 202 (310)
T PF12048_consen 174 ERLFARIEAAIAFAQ-QQGGKNIVLIGHGT 202 (310)
T ss_pred HHHHHHHHHHHHHHH-hcCCceEEEEEeCh
Confidence 456667777776555 45677799999985
No 50
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=43.12 E-value=46 Score=26.36 Aligned_cols=33 Identities=30% Similarity=0.440 Sum_probs=23.2
Q ss_pred cCCHHHHHHHHHHHHHHHHhhC-----CCCcEEEEecC
Q 028163 175 EETVAGARERYAQVIKALADKY-----PFEDLLLVTHG 207 (212)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~-----~~~~vliVsH~ 207 (212)
+....+..+-+..+++.|.+.+ +.+.|++|+|.
T Consensus 56 g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHS 93 (225)
T PF07819_consen 56 GRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHS 93 (225)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEc
Confidence 4566666666666777766655 46789999995
No 51
>COG5564 Predicted TIM-barrel enzyme, possibly a dioxygenase [General function prediction only]
Probab=42.84 E-value=45 Score=26.67 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=26.6
Q ss_pred cCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 175 EETVAGARERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
+-|..++..=+..+.+....- .+++|+++|||.|.
T Consensus 197 ~~Sl~~~vel~~~~~~aar~v--~kd~i~l~~GGPi~ 231 (276)
T COG5564 197 ALSLADCVELIELAAEAARGV--RKDVIPLCHGGPIS 231 (276)
T ss_pred ccCHHHHHHHHHHHHHHHhhh--hhceeeeccCCCcC
Confidence 568888877777666665533 57899999999986
No 52
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=37.79 E-value=75 Score=25.12 Aligned_cols=35 Identities=11% Similarity=0.038 Sum_probs=24.3
Q ss_pred cCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCC
Q 028163 175 EETVAGARERYAQVIKALADKYPFEDLLLVTHGNL 209 (212)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~ 209 (212)
++....+.++..+.++..+.+...+.+|||+|-..
T Consensus 141 ~~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH~pP 175 (239)
T TIGR03729 141 PMSDPERTAIVLKQLKKQLNQLDNKQVIFVTHFVP 175 (239)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCCEEEEEcccc
Confidence 45566676776676666555556678999999753
No 53
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=37.30 E-value=38 Score=28.52 Aligned_cols=38 Identities=11% Similarity=-0.097 Sum_probs=29.5
Q ss_pred eCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHH
Q 028163 24 RHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGR 61 (212)
Q Consensus 24 RHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~ 61 (212)
|--.-.||..+.|.+.++.+.++.||+.|++-.+.+.+
T Consensus 123 R~lgltwn~~N~~g~g~~~~~~~GLs~~Gk~lV~~~N~ 160 (313)
T COG2355 123 RSLGLTWNRDNLFGDGCYERTGGGLTPFGKELVREMNE 160 (313)
T ss_pred eEEEeeeccCCcccCccCCCCCCCCCHHHHHHHHHHHh
Confidence 44444688888888888887889999999988776654
No 54
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=36.79 E-value=80 Score=22.19 Aligned_cols=28 Identities=21% Similarity=0.455 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEecC
Q 028163 180 GARERYAQVIKALADKYPFEDLLLVTHG 207 (212)
Q Consensus 180 ~~~~R~~~~l~~l~~~~~~~~vliVsH~ 207 (212)
.+..++.+.+..+.++++...|+|+.|+
T Consensus 45 ~~~~~~~~~l~~~~~~~~~~~i~itGHS 72 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYPDYSIVITGHS 72 (140)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEET
T ss_pred HHHHHHHHHHHHHHhcccCccchhhccc
Confidence 6667888888888888888889999996
No 55
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=36.61 E-value=71 Score=27.78 Aligned_cols=47 Identities=17% Similarity=0.285 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHHHHhh----c-CC-----CCC--EEEEccchhHHHHHHHHHHHh
Q 028163 47 HIVEEGRVRAFCTGRRLRAN----L-GF-----PID--RVFVSPFLRCIQTAYEVVSAL 93 (212)
Q Consensus 47 ~LT~~G~~qa~~l~~~l~~~----~-~~-----~~~--~i~~Spl~R~~qTA~~~~~~l 93 (212)
-||..|..|-..+|+.+..- + .. .++ .|+|+-+.|++|.|-++.-.+
T Consensus 168 ~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~lf~~ 226 (487)
T KOG3672|consen 168 MLTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFLFLY 226 (487)
T ss_pred ceeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHHHHh
Confidence 47899999999999987631 0 11 122 288999999999998775443
No 56
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=35.30 E-value=70 Score=25.76 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=24.4
Q ss_pred cCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCC
Q 028163 175 EETVAGARERYAQVIKALADKYPFEDLLLVTHGNLL 210 (212)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i 210 (212)
-+|+++..+|+-+.+. ...+++..|+|+|+++.
T Consensus 126 i~s~~eA~~~ive~~~---~~~~~~~~VliaH~~~~ 158 (238)
T cd07397 126 VISLEESAQRIIAAAK---KAPPDLPLILLAHNGPS 158 (238)
T ss_pred CCCHHHHHHHHHHHhh---hcCCCCCeEEEeCcCCc
Confidence 3688888888887774 22346779999999863
No 57
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=34.68 E-value=41 Score=28.20 Aligned_cols=39 Identities=10% Similarity=-0.060 Sum_probs=27.7
Q ss_pred EeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHHH
Q 028163 23 MRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTGR 61 (212)
Q Consensus 23 vRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~~ 61 (212)
||+-.-.||..+.+.+.+....+.+||+.|++-.+++.+
T Consensus 127 vR~i~Lt~n~~N~~a~g~~~~~~~GLt~~G~~vv~~mn~ 165 (309)
T cd01301 127 VRYLGLTWNGDNKFADGCGEKRGGGLTPFGKELVREMNR 165 (309)
T ss_pred CeEEEeeecCCCccccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 355555677666666655555688999999998877754
No 58
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=32.94 E-value=65 Score=26.62 Aligned_cols=27 Identities=19% Similarity=0.300 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHhhCCCCcEEEEecCCC
Q 028163 181 ARERYAQVIKALADKYPFEDLLLVTHGNL 209 (212)
Q Consensus 181 ~~~R~~~~l~~l~~~~~~~~vliVsH~~~ 209 (212)
...++...+..|.. .+..|++||||++
T Consensus 32 ~l~~l~~~i~~l~~--~g~~vilVssGAv 58 (284)
T cd04256 32 RLASIVEQVSELQS--QGREVILVTSGAV 58 (284)
T ss_pred HHHHHHHHHHHHHH--CCCEEEEEeeCcH
Confidence 33344444444432 3678999999975
No 59
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=32.93 E-value=83 Score=28.01 Aligned_cols=33 Identities=12% Similarity=0.156 Sum_probs=28.4
Q ss_pred cCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecC
Q 028163 175 EETVAGARERYAQVIKALADKYPFEDLLLVTHG 207 (212)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~ 207 (212)
.|-..+...+++..++.....+.++.|+||+|.
T Consensus 158 ~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHS 190 (473)
T KOG2369|consen 158 SEERDQYLSKLKKKIETMYKLNGGKKVVLISHS 190 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcCCCceEEEecC
Confidence 577888999999999888877667999999996
No 60
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=31.19 E-value=79 Score=27.32 Aligned_cols=30 Identities=17% Similarity=0.184 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHHHHhhCCCCcEEEEecC
Q 028163 177 TVAGARERYAQVIKALADKYPFEDLLLVTHG 207 (212)
Q Consensus 177 s~~~~~~R~~~~l~~l~~~~~~~~vliVsH~ 207 (212)
...++..++++.++...... ++.|+||+|.
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~-~~kv~li~HS 127 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHS 127 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeC
Confidence 55688888999998887655 7889999996
No 61
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=31.16 E-value=56 Score=26.80 Aligned_cols=28 Identities=18% Similarity=0.218 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEec
Q 028163 179 AGARERYAQVIKALADKYPFEDLLLVTH 206 (212)
Q Consensus 179 ~~~~~R~~~~l~~l~~~~~~~~vliVsH 206 (212)
+.-.+|++++.+.|.+.....+|++|||
T Consensus 46 ~~E~erl~~~r~~i~~~ak~a~VitISH 73 (304)
T COG2248 46 QRELERLRQAREKIQRYAKKADVITISH 73 (304)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCEEEEee
Confidence 3345677888887776555778999999
No 62
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=28.34 E-value=94 Score=25.25 Aligned_cols=28 Identities=32% Similarity=0.363 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEecC
Q 028163 179 AGARERYAQVIKALADKYPFEDLLLVTHG 207 (212)
Q Consensus 179 ~~~~~R~~~~l~~l~~~~~~~~vliVsH~ 207 (212)
...+..+++.+..|+.. ...+|++|||.
T Consensus 163 alTR~~lq~~l~~lw~~-~~~TvllVTHd 190 (248)
T COG1116 163 ALTREELQDELLRLWEE-TRKTVLLVTHD 190 (248)
T ss_pred HHHHHHHHHHHHHHHHh-hCCEEEEEeCC
Confidence 34455566666666643 46899999996
No 63
>PF02604 PhdYeFM_antitox: Antitoxin Phd_YefM, type II toxin-antitoxin system; InterPro: IPR006442 This entry is represented by Bacteriophage P1, prevent-host-death protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family of proteins is characterised by a region of about 55 amino acids toward the N-terminal end of bacterial proteins which are themselves only 85 amino acids, or thereabouts, in length. The best-characterised member is prevent-host-death (phd) of bacteriophage P1, the antidote partner of death-on-curing (doc) (IPR006440 from INTERPRO) in an addiction module. Addiction modules prevent plasmid curing by killing the host cell as the longer-lived killing protein persists while the gene for the shorter-lived antidote is lost. Note, however, that relatively few members of this family appear to be plasmid or phage-encoded. Also, there is little overlap, except for phage P1 itself, of species with this family and with the doc family. ; PDB: 3DBO_A 2ODK_B 3G5O_D 2A6Q_B 3D55_C 3OEI_E 3CTO_C 3K33_D 3KH2_F 3HS2_C ....
Probab=28.05 E-value=1e+02 Score=19.29 Aligned_cols=30 Identities=10% Similarity=0.440 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHHHHHhhCCCCcEEEEecCC
Q 028163 177 TVAGARERYAQVIKALADKYPFEDLLLVTHGN 208 (212)
Q Consensus 177 s~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~ 208 (212)
|..++..++.++++.+... +..|+|.-||.
T Consensus 5 s~~e~r~~~~~~l~~v~~~--~~pv~It~~g~ 34 (75)
T PF02604_consen 5 SITEFRNNFSELLDEVEEG--EEPVIITKNGK 34 (75)
T ss_dssp EHHHHHHTHHHHHHHHHHC--T-EEEEEETTE
T ss_pred cHHHHHHHHHHHHHHHHcC--CCeEEEEECCC
Confidence 5788999999999998752 33477777774
No 64
>PF13479 AAA_24: AAA domain
Probab=26.61 E-value=1.1e+02 Score=23.82 Aligned_cols=34 Identities=9% Similarity=0.206 Sum_probs=26.9
Q ss_pred cCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCC
Q 028163 175 EETVAGARERYAQVIKALADKYPFEDLLLVTHGNL 209 (212)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~ 209 (212)
+--+..+.+++..+++.++. ..+.+||+++|...
T Consensus 105 ~~~yg~~~~~~~~~i~~l~~-~~~~~VI~tah~~~ 138 (213)
T PF13479_consen 105 GKGYGELQQEFMRFIDKLLN-ALGKNVIFTAHAKE 138 (213)
T ss_pred cchHHHHHHHHHHHHHHHHH-HCCCcEEEEEEEEE
Confidence 35588888999999998774 24789999999753
No 65
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=26.58 E-value=53 Score=29.81 Aligned_cols=31 Identities=16% Similarity=0.300 Sum_probs=23.7
Q ss_pred CCHHHHHHHHHHHHHHHHhhCCCCcEEEEecC
Q 028163 176 ETVAGARERYAQVIKALADKYPFEDLLLVTHG 207 (212)
Q Consensus 176 Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~ 207 (212)
|+-..+..-....|...+..+++ +||||||.
T Consensus 179 EPTNHLD~~~i~WLe~~L~~~~g-tviiVSHD 209 (530)
T COG0488 179 EPTNHLDLESIEWLEDYLKRYPG-TVIVVSHD 209 (530)
T ss_pred CCCcccCHHHHHHHHHHHHhCCC-cEEEEeCC
Confidence 55566666677788777767777 99999996
No 66
>PF04270 Strep_his_triad: Streptococcal histidine triad protein ; InterPro: IPR006270 This entry represents a repeated sequence region that includes a His-X-X-His-X-His (histidine triad) motif, which is found in family of Streptococcal proteins. Members of the family are suggested to cleave human complement component 3, and family member PhpA has been shown in vaccine studies to be a protective antigen in mice []. ; PDB: 2CS7_C.
Probab=25.87 E-value=51 Score=19.92 Aligned_cols=31 Identities=16% Similarity=0.099 Sum_probs=19.7
Q ss_pred EEEEEeCCCCCCCCCCccccCCCCCCCCCCCHHHHHHHHHHH
Q 028163 19 NVIVMRHGDRADNFEPLWVSTAARPWDPHIVEEGRVRAFCTG 60 (212)
Q Consensus 19 ~i~lvRHGe~~~n~~~~~~~~~~~~~D~~LT~~G~~qa~~l~ 60 (212)
.=|.||||--.+-.. - ..|++..+++|+...
T Consensus 20 ~gy~vpHgdH~HyI~----k-------~dLs~~E~~aA~~~~ 50 (53)
T PF04270_consen 20 DGYVVPHGDHFHYIP----K-------SDLSASELKAAQAYL 50 (53)
T ss_dssp SEEEEEETTEEEEEE----G-------GGS-HHHHHHHHHHH
T ss_pred CeEEeeCCCcccCCc----h-------hhCCHHHHHHHHHHH
Confidence 458999996543221 1 269998888887654
No 67
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=25.78 E-value=1.4e+02 Score=20.91 Aligned_cols=29 Identities=21% Similarity=0.399 Sum_probs=22.7
Q ss_pred cCCHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Q 028163 175 EETVAGARERYAQVIKALADKYPFEDLLLVTH 206 (212)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH 206 (212)
+++.+++.+|++++++.+- .++.|+|.|-
T Consensus 38 ~~~~~~~~~~l~~~i~~~~---~~~~vivltD 66 (116)
T TIGR00824 38 GENAETLQEKYNAALADLD---TEEEVLFLVD 66 (116)
T ss_pred CcCHHHHHHHHHHHHHhcC---CCCCEEEEEe
Confidence 6899999999999998873 2456777663
No 68
>COG4118 Phd Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]
Probab=24.92 E-value=1.5e+02 Score=19.72 Aligned_cols=32 Identities=9% Similarity=0.317 Sum_probs=24.8
Q ss_pred CCHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCC
Q 028163 176 ETVAGARERYAQVIKALADKYPFEDLLLVTHGNLL 210 (212)
Q Consensus 176 Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i 210 (212)
=+..++..++.++|+++.. ++.|+|.-||..+
T Consensus 5 V~i~e~k~~~S~lL~rV~a---GEev~IT~~G~PV 36 (84)
T COG4118 5 VNIRELRTHLSELLRRVRA---GEEVIITKRGRPV 36 (84)
T ss_pred ccHHHHHHHHHHHHHHHhC---CCEEEEeeCCeEE
Confidence 3578889999999998863 6788888887643
No 69
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=24.43 E-value=1.2e+02 Score=22.77 Aligned_cols=27 Identities=19% Similarity=0.303 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEecCC
Q 028163 180 GARERYAQVIKALADKYPFEDLLLVTHGN 208 (212)
Q Consensus 180 ~~~~R~~~~l~~l~~~~~~~~vliVsH~~ 208 (212)
...+++.+.+.++.. .+.+||+|||.-
T Consensus 161 ~~~~~~~~~l~~~~~--~~~tili~sH~~ 187 (190)
T TIGR01166 161 AGREQMLAILRRLRA--EGMTVVISTHDV 187 (190)
T ss_pred HHHHHHHHHHHHHHH--cCCEEEEEeecc
Confidence 445566666666643 257899999964
No 70
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=24.01 E-value=96 Score=24.96 Aligned_cols=22 Identities=23% Similarity=0.374 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEecC
Q 028163 183 ERYAQVIKALADKYPFEDLLLVTHG 207 (212)
Q Consensus 183 ~R~~~~l~~l~~~~~~~~vliVsH~ 207 (212)
.++++++.+|-. .=+|+||||.
T Consensus 186 ~kIEeLi~eLk~---~yTIviVTHn 207 (253)
T COG1117 186 LKIEELITELKK---KYTIVIVTHN 207 (253)
T ss_pred HHHHHHHHHHHh---ccEEEEEeCC
Confidence 346666666652 3479999996
No 71
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=23.91 E-value=1.2e+02 Score=24.25 Aligned_cols=28 Identities=29% Similarity=0.347 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEecC
Q 028163 179 AGARERYAQVIKALADKYPFEDLLLVTHG 207 (212)
Q Consensus 179 ~~~~~R~~~~l~~l~~~~~~~~vliVsH~ 207 (212)
.-..+|++..+-.++. ..++-+++|||+
T Consensus 165 a~tRe~mQelLldlw~-~tgk~~lliTH~ 192 (259)
T COG4525 165 ALTREQMQELLLDLWQ-ETGKQVLLITHD 192 (259)
T ss_pred HHHHHHHHHHHHHHHH-HhCCeEEEEecc
Confidence 3456778888877774 457889999997
No 72
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=23.19 E-value=1.4e+02 Score=24.36 Aligned_cols=12 Identities=25% Similarity=0.587 Sum_probs=9.2
Q ss_pred CCcEEEEecCCC
Q 028163 198 FEDLLLVTHGNL 209 (212)
Q Consensus 198 ~~~vliVsH~~~ 209 (212)
+..|+||+||+.
T Consensus 47 g~~vvlV~Sga~ 58 (266)
T PRK12314 47 GKEVILVSSGAI 58 (266)
T ss_pred CCeEEEEeeCcc
Confidence 457999999853
No 73
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=23.14 E-value=1.3e+02 Score=23.91 Aligned_cols=33 Identities=15% Similarity=0.238 Sum_probs=26.5
Q ss_pred cCCHHHHHHHHHHHHHHHHhhCCCCcEEEEecC
Q 028163 175 EETVAGARERYAQVIKALADKYPFEDLLLVTHG 207 (212)
Q Consensus 175 ~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~ 207 (212)
.++.......+..+|..|....+.++|-||+|.
T Consensus 69 ~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHS 101 (233)
T PF05990_consen 69 RESARFSGPALARFLRDLARAPGIKRIHILAHS 101 (233)
T ss_pred hhhHHHHHHHHHHHHHHHHhccCCceEEEEEeC
Confidence 356777778888889888865567899999996
No 74
>PF07897 DUF1675: Protein of unknown function (DUF1675); InterPro: IPR012463 The members of this family are sequences derived from hypothetical plant proteins of unknown function. One member of this family (Q9SFV5 from SWISSPROT) is annotated as a putative RNA-binding protein, but no evidence was found to support this.
Probab=22.83 E-value=54 Score=27.17 Aligned_cols=12 Identities=42% Similarity=0.761 Sum_probs=10.4
Q ss_pred cEEEEecCCCCC
Q 028163 200 DLLLVTHGNLLS 211 (212)
Q Consensus 200 ~vliVsH~~~i~ 211 (212)
.|++||||.+++
T Consensus 252 ~i~c~chg~~~~ 263 (284)
T PF07897_consen 252 RIVCVCHGSFLS 263 (284)
T ss_pred EEEEEecCCCCC
Confidence 599999999875
No 75
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=22.74 E-value=1.1e+02 Score=24.88 Aligned_cols=24 Identities=25% Similarity=0.432 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEecC
Q 028163 182 RERYAQVIKALADKYPFEDLLLVTHG 207 (212)
Q Consensus 182 ~~R~~~~l~~l~~~~~~~~vliVsH~ 207 (212)
...+-..|+++... +.+||+|||.
T Consensus 175 ~~~i~~lL~~l~~e--g~tIl~vtHD 198 (254)
T COG1121 175 QKEIYDLLKELRQE--GKTVLMVTHD 198 (254)
T ss_pred HHHHHHHHHHHHHC--CCEEEEEeCC
Confidence 44455666666533 7899999996
No 76
>PRK00865 glutamate racemase; Provisional
Probab=22.13 E-value=3.3e+02 Score=22.00 Aligned_cols=55 Identities=22% Similarity=0.321 Sum_probs=34.7
Q ss_pred HHHHHhCCCCccCCCcccccccCCCCcCCHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Q 028163 149 SELEALLPAGTVDSSVKQVYDQLPQWEETVAGARERYAQVIKALADKYPFEDLLLVTH 206 (212)
Q Consensus 149 ~~~~~~~p~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH 206 (212)
..+.+.+|.. +.-|--+....|.+..|.+++..|+.+.++.|.. ..-+-|+|-|.
T Consensus 22 ~~i~~~lp~~--~~iY~~D~~~~PYG~ks~~~i~~~~~~~~~~L~~-~g~d~iVIaCN 76 (261)
T PRK00865 22 REIRRLLPDE--HIIYVGDTARFPYGEKSEEEIRERTLEIVEFLLE-YGVKMLVIACN 76 (261)
T ss_pred HHHHHHCCCC--CEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHh-CCCCEEEEeCc
Confidence 3556666654 2223223334566568999999999999999985 23344555443
No 77
>PF15524 Toxin_45: Putative toxin 45
Probab=22.01 E-value=62 Score=21.40 Aligned_cols=15 Identities=33% Similarity=0.614 Sum_probs=12.9
Q ss_pred CCCCCCCHHHHHHHH
Q 028163 43 PWDPHIVEEGRVRAF 57 (212)
Q Consensus 43 ~~D~~LT~~G~~qa~ 57 (212)
.+|..|++.|++|.-
T Consensus 61 EWDVQLS~~G~~q~G 75 (94)
T PF15524_consen 61 EWDVQLSETGREQLG 75 (94)
T ss_pred EEEeeeCHhHHHHhc
Confidence 479999999999863
No 78
>cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.
Probab=21.65 E-value=1.6e+02 Score=22.29 Aligned_cols=25 Identities=28% Similarity=0.373 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEecCC
Q 028163 182 RERYAQVIKALADKYPFEDLLLVTHGN 208 (212)
Q Consensus 182 ~~R~~~~l~~l~~~~~~~~vliVsH~~ 208 (212)
.+++.+.+..+.+ .+.+||+|||.-
T Consensus 125 ~~~l~~~l~~~~~--~g~tvIivSH~~ 149 (176)
T cd03238 125 INQLLEVIKGLID--LGNTVILIEHNL 149 (176)
T ss_pred HHHHHHHHHHHHh--CCCEEEEEeCCH
Confidence 3444445555542 367899999963
No 79
>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional
Probab=21.45 E-value=1.9e+02 Score=23.34 Aligned_cols=34 Identities=15% Similarity=0.186 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHHHHHHHHhhCCCCcEE--EEecCCC
Q 028163 176 ETVAGARERYAQVIKALADKYPFEDLL--LVTHGNL 209 (212)
Q Consensus 176 Es~~~~~~R~~~~l~~l~~~~~~~~vl--iVsH~~~ 209 (212)
=+.+++..|+++.-.+|.+.+.++.++ .|--||+
T Consensus 58 is~~~I~~rI~~LA~~I~~dy~~~~~vilgILkGg~ 93 (241)
T PTZ00149 58 LPNGLIKDRVEKLAYDIKQVYGNEELHILCILKGSR 93 (241)
T ss_pred eCHHHHHHHHHHHHHHHHHHcCCCCeEEEEECCCCH
Confidence 468999999999999998877666544 3444443
No 80
>TIGR01618 phage_P_loop phage nucleotide-binding protein. This model represents an uncharacterized family of proteins from a number of phage of Gram-positive bacteria. This protein contains a P-loop motif, G/A-X-X-G-X-G-K-T near its amino end. The function of this protein is unknown.
Probab=21.04 E-value=1.6e+02 Score=23.30 Aligned_cols=30 Identities=3% Similarity=0.065 Sum_probs=23.6
Q ss_pred CHHHHHHHHHHHHHHHHhhCCCCcEEEEecCC
Q 028163 177 TVAGARERYAQVIKALADKYPFEDLLLVTHGN 208 (212)
Q Consensus 177 s~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~ 208 (212)
-|..+..++..++..|.. .+.+|++++|..
T Consensus 114 ~yg~~~~~fl~~l~~L~~--~g~nII~tAhe~ 143 (220)
T TIGR01618 114 HYQKLDLWFLDLLTVLKE--SNKNIYATAWEL 143 (220)
T ss_pred cHHHHHHHHHHHHHHHHh--CCCcEEEEEeec
Confidence 356677788888888864 478999999974
No 81
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=20.92 E-value=1.5e+02 Score=23.70 Aligned_cols=30 Identities=13% Similarity=0.285 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEEecCCC
Q 028163 179 AGARERYAQVIKALADKYPFEDLLLVTHGNL 209 (212)
Q Consensus 179 ~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~ 209 (212)
.+-.+.+...+..+... .+.+||+|||...
T Consensus 175 ~~t~~~V~~ll~~~~~~-~g~tii~VTHd~~ 204 (226)
T COG1136 175 SKTAKEVLELLRELNKE-RGKTIIMVTHDPE 204 (226)
T ss_pred hHHHHHHHHHHHHHHHh-cCCEEEEEcCCHH
Confidence 44455566666666532 3569999999753
No 82
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=20.66 E-value=2.3e+02 Score=20.74 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHHHHHHhhCCCCcEEEEe
Q 028163 176 ETVAGARERYAQVIKALADKYPFEDLLLVT 205 (212)
Q Consensus 176 Es~~~~~~R~~~~l~~l~~~~~~~~vliVs 205 (212)
++..++..+++++++.+.+..+...|++++
T Consensus 74 ~~~~~~~~~~~~li~~i~~~~p~~~i~~~~ 103 (169)
T cd01831 74 PPGEDFTNAYVEFIEELRKRYPDAPIVLML 103 (169)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 578899999999999998776665566654
No 83
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=20.47 E-value=2e+02 Score=20.28 Aligned_cols=34 Identities=6% Similarity=0.018 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHHHHHHHHhhCCCCcEEEEecCCCCC
Q 028163 176 ETVAGARERYAQVIKALADKYPFEDLLLVTHGNLLS 211 (212)
Q Consensus 176 Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH~~~i~ 211 (212)
+...+....+.++++.... .++.|+|-|++|.=|
T Consensus 58 ~~~~~~~~~~~~~i~~~~~--~~~~VlVHC~~G~~R 91 (138)
T smart00195 58 TKISPYFPEAVEFIEDAEK--KGGKVLVHCQAGVSR 91 (138)
T ss_pred CChHHHHHHHHHHHHHHhc--CCCeEEEECCCCCch
Confidence 5566777788888887763 467899999998644
No 84
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=20.21 E-value=1.8e+02 Score=25.69 Aligned_cols=30 Identities=3% Similarity=0.127 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcEEEEecC
Q 028163 178 VAGARERYAQVIKALADKYPFEDLLLVTHG 207 (212)
Q Consensus 178 ~~~~~~R~~~~l~~l~~~~~~~~vliVsH~ 207 (212)
..+...+++..++.+.+....+.|.||+|+
T Consensus 141 ~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHS 170 (440)
T PLN02733 141 LPETMDGLKKKLETVYKASGGKKVNIISHS 170 (440)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 456677888888888776677889999996
No 85
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=20.13 E-value=1.9e+02 Score=21.44 Aligned_cols=31 Identities=23% Similarity=0.422 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Q 028163 176 ETVAGARERYAQVIKALADKYPFEDLLLVTH 206 (212)
Q Consensus 176 Es~~~~~~R~~~~l~~l~~~~~~~~vliVsH 206 (212)
-+.+++..++.++++.+....++..|++++-
T Consensus 84 ~~~~~~~~~l~~li~~i~~~~~~~~iiv~~~ 114 (191)
T cd01836 84 TSIARWRKQLAELVDALRAKFPGARVVVTAV 114 (191)
T ss_pred CCHHHHHHHHHHHHHHHHhhCCCCEEEEECC
Confidence 3578899999999999987666777888763
Done!