Query 028169
Match_columns 212
No_of_seqs 127 out of 967
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 11:43:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028169.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028169hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q46_A TT-ippase; inorganic py 100.0 8.6E-68 2.9E-72 444.9 12.2 161 35-195 1-161 (178)
2 1e9g_A Ppase, inorganic pyroph 100.0 7.2E-67 2.5E-71 465.9 9.7 187 11-199 4-218 (286)
3 2prd_A Pyrophosphate phosphohy 100.0 5.3E-65 1.8E-69 426.5 15.4 160 36-198 1-163 (174)
4 3gvf_A Inorganic pyrophosphata 100.0 7E-65 2.4E-69 432.6 14.2 165 30-194 16-184 (196)
5 3fq3_A Inorganic pyrophosphata 100.0 1.9E-64 6.6E-69 430.2 14.9 160 30-189 16-179 (197)
6 2au7_A Inorganic pyrophosphata 100.0 4.4E-64 1.5E-68 421.4 15.2 159 37-195 1-163 (175)
7 3ld3_A Inorganic pyrophosphata 100.0 9.6E-64 3.3E-68 426.4 15.2 160 30-189 16-179 (199)
8 3d53_A Inorganic pyrophosphata 100.0 1.2E-63 4.1E-68 418.1 14.5 154 36-190 2-159 (173)
9 2bqx_A Inorganic pyrophosphata 100.0 3.3E-63 1.1E-67 415.4 13.9 157 37-194 2-161 (173)
10 3tr4_A Inorganic pyrophosphata 100.0 3.7E-62 1.3E-66 410.6 13.6 151 39-190 6-160 (178)
11 1qez_A Ppase, S-ppase, protein 100.0 2.7E-61 9.2E-66 403.8 14.7 152 40-191 2-156 (173)
12 1sxv_A Inorganic pyrophosphata 100.0 6.9E-60 2.3E-64 395.1 11.2 145 49-193 11-156 (172)
13 2l76_A Nfatc2-interacting prot 52.9 15 0.00052 27.5 4.0 64 47-111 18-94 (95)
14 2k8h_A Small ubiquitin protein 45.3 28 0.00096 26.2 4.5 25 48-72 24-48 (110)
15 1jo6_A KCNMB2, potassium large 31.1 5.4 0.00019 26.3 -1.3 21 86-106 2-33 (45)
16 3goe_A DNA repair protein RAD6 24.5 53 0.0018 24.1 2.8 53 50-108 9-81 (82)
17 4fa8_E Macrophage colony-stimu 21.4 17 0.00057 29.4 -0.4 29 160-188 109-137 (147)
18 2yue_A Protein neuralized; str 21.1 53 0.0018 26.4 2.5 46 105-161 36-84 (168)
No 1
>3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} SCOP: b.40.5.1 PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A
Probab=100.00 E-value=8.6e-68 Score=444.85 Aligned_cols=161 Identities=43% Similarity=0.732 Sum_probs=153.7
Q ss_pred cCCCCCCCCCCCCCCeeEEEEeeCCCCCceEEEecCCCCeEEeeeccccccCccccCccccccCCCCCcceEEEecCccc
Q 028169 35 AHPWHDLEIGPGAPAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPV 114 (212)
Q Consensus 35 ~spwHdIpl~~~~~~~vn~VVEIPrgs~~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlvl~~~p~ 114 (212)
+|||||||++.+.|.+|||||||||||++|||+|+++|.|++||++++++.||+|||||||||++||||||||||+++|+
T Consensus 1 ~spwhdi~~g~~~p~~~nvvIEIP~gs~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl~~~~~ 80 (178)
T 3q46_A 1 MNPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDPFDIMVIMREPV 80 (178)
T ss_dssp CCTTTTSCSCSBTTTBCCCEEEECTTCCEEEEECTTTSCEEEEEECSSSCCCSSEEEECTTCCBTTTBCCEEEECCSSCC
T ss_pred CCccccCCCCCCCCCEEEEEEEECCCCCeeEEECCCCCCEEEeecccCCCCCCcccccCCCccCCCCCeeEEEEEcCCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEEEeeeEEeeeCCCCCcEEEEEecCCCcccCCCCCCCCChhHHHHHHHHHHHhhcccCCcceeehhhhhcccc
Q 028169 115 LPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDCIHSFVFIILSYSLIDYLSQH 194 (212)
Q Consensus 115 ~~G~v~~vrvlG~L~miD~gE~D~KIIaV~~~Dp~~~~i~di~Dl~~~~l~~I~~fF~~YK~leg~~v~~~~~~d~~~~~ 194 (212)
.||++++||+||+|+|+|+||+|||||||+.+||+|++++|++|||++++++|+|||++||.||||.++.++|.+-..|.
T Consensus 81 ~pG~vi~~r~iGvl~m~Dege~D~KiiaV~~~Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~legK~v~~~g~~~~~~A~ 160 (178)
T 3q46_A 81 YPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKDISDVPKAFLDEIAHFFQRYKELQGKTTKIEGWGNAEEAK 160 (178)
T ss_dssp CTTCBC-CEEEEEEEEEETTEECCEEEEECTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTGGGTCCEEEEEEEEHHHHH
T ss_pred CCceEEEEEEEEEEEeecCCCccceEEEeeCCCccccccCChHHCCHHHHHHHHHHHHHhcCcCCCceEeccccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998876544443
Q ss_pred c
Q 028169 195 S 195 (212)
Q Consensus 195 ~ 195 (212)
.
T Consensus 161 ~ 161 (178)
T 3q46_A 161 R 161 (178)
T ss_dssp H
T ss_pred H
Confidence 3
No 2
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A
Probab=100.00 E-value=7.2e-67 Score=465.93 Aligned_cols=187 Identities=24% Similarity=0.360 Sum_probs=176.1
Q ss_pred cccCCCCCCcceeeeeecccCCcccCCCCCCCCCCCCC-CeeEEEEeeCCCCCceEEEecCC-----------CCeEEee
Q 028169 11 NNSGGPPVALNERILSSMSHRSVAAHPWHDLEIGPGAP-AVCNCVVEIGKGGKVKYELDKAS-----------GLIKVDR 78 (212)
Q Consensus 11 ~~~~g~~~~~~~r~~~~~~~~~~~~spwHdIpl~~~~~-~~vn~VVEIPrgs~~KyEid~~~-----------g~i~~Dr 78 (212)
..++|+++|++||+|+. ..|+.+||||+||++++.+ .+|||||||||||++|||+|+++ |.+++||
T Consensus 4 ~~~~G~~~t~~~r~~~~--~~g~~~sp~hdIp~~~~~~~~~~nvVIEIP~gs~~KyEidk~~~~nPIkqd~k~G~lr~dr 81 (286)
T 1e9g_A 4 TRQIGAKNTLEYKVYIE--KDGKPVSAFHDIPLYADKENNIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVR 81 (286)
T ss_dssp EEEEEETTSTTCEEEEE--ETTEEECTTTTSCSEEETTTTEEEEEEEECTTCCBCEEECTTSTTCCEEECEETTEECBCC
T ss_pred eeeecCCCCcceEEEEE--eCCeecCchhhCCCCCCCCCCEEEEEEEECCCCCeEEEEccCCCCCcchhhhcCCcEEEEe
Confidence 45679999999999964 4699999999999998864 89999999999999999999987 7788889
Q ss_pred eccccccCccccCcccccc------------CCCCCcceEEEecCcccCCcceEEEEEeeeEEeeeCCCCCcEEEEEecC
Q 028169 79 VLYSSVVYPHNYGFIPRTI------------CEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD 146 (212)
Q Consensus 79 ~l~~~~~yP~NYGfIPqT~------------~gDgDPLDvlvl~~~p~~~G~v~~vrvlG~L~miD~gE~D~KIIaV~~~ 146 (212)
.+++++.|||||||||||| +|||||||||||+++|+.||++++||+||+|+|+|+||+|||||||+.+
T Consensus 82 ~l~~~~~YP~NYGfIPqTledp~~~~~~t~~~gDgDPLDVlvi~~~p~~pG~vi~vr~IGvl~MiDege~D~KIIaV~~~ 161 (286)
T 1e9g_A 82 NCFPHHGYIHNYGAFPQTWEDPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161 (286)
T ss_dssp EETTCCSCSSEEEECSSCCCCTTSEETTTTEEBCSSCCEEEECCSSCCCTTCEEEEEEEEEECEEETTEECCEEEEEETT
T ss_pred ccCCCCCCccCcccCcccccCcccccccCCCCCCCCceEEEEecCccCCCccEEEEEEeEEEEeccCCCCCceEEEEeCC
Confidence 9999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCh---hHHHHHHHHHHHhhcccCCcceeehh-hhhccccceeec
Q 028169 147 DPEFRHYKDIKELPP---HRLAEIRRFFEDCIHSFVFIILSYSL-IDYLSQHSAVST 199 (212)
Q Consensus 147 Dp~~~~i~di~Dl~~---~~l~~I~~fF~~YK~leg~~v~~~~~-~d~~~~~~~~~~ 199 (212)
||+|++|+|++||++ +++++|+|||++||.++||++|+|.+ ..++++..|.+.
T Consensus 162 Dp~~~~i~di~Dl~~~~p~~l~~i~~fF~~YK~leGK~~n~~~~~~~~~~~~~A~~v 218 (286)
T 1e9g_A 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDI 218 (286)
T ss_dssp STTGGGCCSHHHHHHHSTTHHHHHHHHHHHTTGGGTCCCCEEGGGGCCBCHHHHHHH
T ss_pred CcccccCCCHHHhchhhHHHHHHHHHHHHHhcCcCCCCcceeEecCcCCCHHHHHHH
Confidence 999999999999987 89999999999999999999999999 689998888754
No 3
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1
Probab=100.00 E-value=5.3e-65 Score=426.52 Aligned_cols=160 Identities=38% Similarity=0.605 Sum_probs=151.8
Q ss_pred CCCCCCCCCCCCCCeeEEEEeeCCCCCceEEEecCCCCeEEeeeccccccCccccCccccccCCCCCcceEEEecCcccC
Q 028169 36 HPWHDLEIGPGAPAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVL 115 (212)
Q Consensus 36 spwHdIpl~~~~~~~vn~VVEIPrgs~~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlvl~~~p~~ 115 (212)
|+||+||++++.|..|||||||||||++|||+|+++|.|++||++++++.||+|||||||||++||||||||||+++|+.
T Consensus 1 ~~~h~ip~~~~~p~~~nvvIEIP~gs~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl~~~p~~ 80 (174)
T 2prd_A 1 ANLKSLPVGDKAPEVVHMVIEVPRGSGNKYEYDPDLGAIKLDRVLPGAQFYPGDYGFIPSTLAEDGDPLDGLVLSTYPLL 80 (174)
T ss_dssp CCGGGSCCCTTTTTEEEEEEEECTTCCEEEEEETTTTEEEEEEECSSSCCCSSEEEECSSCCCTTSSCCEEEEECSSCCC
T ss_pred CCcccCCCCCCCCCEEEEEEEecCCCCeEEEEecCCCCEEEeeecCCCCcCCcccccccCcccCCCCceEEEEECCCCCC
Confidence 79999999999899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEeeeEEeeeCCCCCcEEEEEecCCCcccCCCCCCCCChhHHHHHHHHHHHhhccc---CCcceeehhhhhcc
Q 028169 116 PGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF---VFIILSYSLIDYLS 192 (212)
Q Consensus 116 ~G~v~~vrvlG~L~miD~gE~D~KIIaV~~~Dp~~~~i~di~Dl~~~~l~~I~~fF~~YK~le---g~~v~~~~~~d~~~ 192 (212)
||++++||+||+|+|+|+||+|||||||+.+||+|++++|++||+++++++|+|||++||.|+ ||.+...+| .+
T Consensus 81 pG~vi~~r~iGvl~m~Dege~D~KiiaV~~~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le~k~gK~v~~~gw---~~ 157 (174)
T 2prd_A 81 PGVVVEVRVVGLLLMEDEKGGDAKVIGVVAEDQRLDHIQDIGDVPEGVKQEIQHFFETYKALEAKKGKWVKVTGW---RD 157 (174)
T ss_dssp TTCEEEEEEEEEEEEEESSCEEEEEEEEETTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTGGGGGGTCCEEEEEE---EC
T ss_pred CceEEEEEEEEEEEEecCCCCccEEEEEECCCcchhhcCChHHCCHHHHHHHHHHHHHhcCccccCCCceEECcc---cC
Confidence 999999999999999999999999999999999999999999999999999999999999999 887766554 45
Q ss_pred ccceee
Q 028169 193 QHSAVS 198 (212)
Q Consensus 193 ~~~~~~ 198 (212)
+..|.+
T Consensus 158 ~~~A~~ 163 (174)
T 2prd_A 158 RKAALE 163 (174)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 4
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A*
Probab=100.00 E-value=7e-65 Score=432.58 Aligned_cols=165 Identities=35% Similarity=0.552 Sum_probs=150.9
Q ss_pred cCCcccCCCCCCCCCCCCCCeeEEEEeeCCCCC-ceEEEecCCCCeEEeeeccccccCccccCccccccCCCCCcceEEE
Q 028169 30 HRSVAAHPWHDLEIGPGAPAVCNCVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLV 108 (212)
Q Consensus 30 ~~~~~~spwHdIpl~~~~~~~vn~VVEIPrgs~-~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlv 108 (212)
.+|+++++||+||++++.|..|||||||||||+ +|||+|+++|.|++||++++++.||+|||||||||++|||||||||
T Consensus 16 ~~g~~~m~~~~i~~g~~~p~~vnvvIEIP~gs~~~KyE~dk~~g~i~~DR~l~s~~~YP~NYGfIP~Tl~~DgDPLDvlv 95 (196)
T 3gvf_A 16 TQGPGSMSFSNVPAGKDLPQDFNVIIEIPAQSEPVKYEADKALGLLVVDRFIGTGMRYPVNYGFIPQTLSGDGDPVDVLV 95 (196)
T ss_dssp -------CGGGSCSCSBTTTBEEEEEEECTTCCSEEEEEETTTTEEEEEEECTTCCCCSSEEEECTTCCCTTSSCCEEEE
T ss_pred ccCCCCCchhhCCCCCCCCCEEEEEEEecCCCCceEEEEecCCCCEEEEeEcCCCccCCcccccccCccCCCCCceEEEE
Confidence 479999999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred ecCcccCCcceEEEEEeeeEEeeeCCCCCcEEEEEecCC--CcccCCCCCCCCChhHHHHHHHHHHHhhccc-CCcceee
Q 028169 109 LMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD--PEFRHYKDIKELPPHRLAEIRRFFEDCIHSF-VFIILSY 185 (212)
Q Consensus 109 l~~~p~~~G~v~~vrvlG~L~miD~gE~D~KIIaV~~~D--p~~~~i~di~Dl~~~~l~~I~~fF~~YK~le-g~~v~~~ 185 (212)
|+++|+.||++++||+||+|+|+|+||+|||||||+.+| |+|++|+|++|||++++++|+|||++||.|| ||.+...
T Consensus 96 l~~~p~~pG~vi~~r~iGvl~M~Dege~D~KIIaVp~~d~~p~~~~i~di~dlp~~~l~~I~~fF~~YK~le~gK~v~v~ 175 (196)
T 3gvf_A 96 ITPFPLLAGSVVRARALGMLKMTDESGVDAKLVAVPHDKVCPMTANLKSIDDVPAYLKDQIKHFFEQYKALEKGKWVKVE 175 (196)
T ss_dssp CCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEE
T ss_pred ecCCccCCeeEEEEEEEEEEEEecCCCcccEEEEEecCCcCchhhhcCchhhCCHHHHHHHHHHHHHhcCcCCCCeEEec
Confidence 999999999999999999999999999999999999998 9999999999999999999999999999999 8988776
Q ss_pred hhhhhcccc
Q 028169 186 SLIDYLSQH 194 (212)
Q Consensus 186 ~~~d~~~~~ 194 (212)
+|.+-..|.
T Consensus 176 gw~~~~~A~ 184 (196)
T 3gvf_A 176 GWDGIDAAH 184 (196)
T ss_dssp EEECHHHHH
T ss_pred cCcCHHHHH
Confidence 665444333
No 5
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A
Probab=100.00 E-value=1.9e-64 Score=430.17 Aligned_cols=160 Identities=35% Similarity=0.616 Sum_probs=147.4
Q ss_pred cCCcccCCCCCCCCCCCCCCeeEEEEeeCCC-CCceEEEecCCCCeEEeeeccccccCccccCccccccCCCCCcceEEE
Q 028169 30 HRSVAAHPWHDLEIGPGAPAVCNCVVEIGKG-GKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLV 108 (212)
Q Consensus 30 ~~~~~~spwHdIpl~~~~~~~vn~VVEIPrg-s~~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlv 108 (212)
..|+.+|+||+||++++.|+.|||||||||| |++|||+|+++|.|++||++++++.||+|||||||||++|||||||||
T Consensus 16 ~~g~~im~~~~ip~g~~~p~~vnvvIEIP~g~s~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPLDvlv 95 (197)
T 3fq3_A 16 TQGPGSMNIDAISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSEDGDPIDVLV 95 (197)
T ss_dssp ------CCGGGSCSCSSTTSCEEEEEEECTTCCSEEEEEETTTTEEEEEEECCSSBCCSSEEEECTTCCCTTSSCCEEEE
T ss_pred cCCCCcCCHHHCCCCCCCCCEEEEEEEecCCCCCEeEEEecCCCCEEEEeecCCCCcCCcccccccCcccCCCCceEEEE
Confidence 4789999999999999999999999999985 999999999999999999999999999999999999999999999999
Q ss_pred ecCcccCCcceEEEEEeeeEEeeeCCCCCcEEEEEecC--CCcccCCCCCCCCChhHHHHHHHHHHHhhccc-CCcceee
Q 028169 109 LMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF-VFIILSY 185 (212)
Q Consensus 109 l~~~p~~~G~v~~vrvlG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~I~~fF~~YK~le-g~~v~~~ 185 (212)
|+++|+.||++++||+||+|+|+|+||+|||||||+++ ||+|++|+|++|||++++++|+|||++||.|| ||.+..-
T Consensus 96 l~~~p~~pG~vi~~r~iGvl~MiDege~D~KIIaVp~~~~dp~~~~i~di~Dlp~~~l~~I~~fF~~YK~le~~K~v~v~ 175 (197)
T 3fq3_A 96 CNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQIAHFFEHYKDLEPGKWVKIG 175 (197)
T ss_dssp CCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCSTTTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEC
T ss_pred EcCCCCCCceEEEEEEEEEEEEecCCCCccEEEEEECCCCCchhcccCchHHCCHHHHHHHHHHHHHhcCcCCCCeEEeC
Confidence 99999999999999999999999999999999999999 89999999999999999999999999999999 6766555
Q ss_pred hhhh
Q 028169 186 SLID 189 (212)
Q Consensus 186 ~~~d 189 (212)
+|.+
T Consensus 176 ~~~~ 179 (197)
T 3fq3_A 176 DWGD 179 (197)
T ss_dssp CCBC
T ss_pred CCCC
Confidence 4443
No 6
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A*
Probab=100.00 E-value=4.4e-64 Score=421.40 Aligned_cols=159 Identities=33% Similarity=0.557 Sum_probs=152.8
Q ss_pred CCCCCCCCCCCCCeeEEEEeeCCCCC-ceEEEecCCCCeEEeeeccccccCccccCccccccCCCCCcceEEEecCcccC
Q 028169 37 PWHDLEIGPGAPAVCNCVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVL 115 (212)
Q Consensus 37 pwHdIpl~~~~~~~vn~VVEIPrgs~-~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlvl~~~p~~ 115 (212)
+||+||++++.|..|||||||||||+ +|||+|+++|.|++||++++++.||+|||||||||++||||||||||+++|+.
T Consensus 1 ~~~~ip~~~~~p~~~nvvIEIP~gs~p~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl~~~p~~ 80 (175)
T 2au7_A 1 SLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDQFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQ 80 (175)
T ss_dssp CGGGCCSCSBTTTBEEEEEEECTTCCSEEEEECTTTCCEEEEEECSSSCCCSSEEEECTTCCCTTSSCCEEEECCSSCCC
T ss_pred CcccCCCCCCCCCEEEEEEEecCCCCceeEEEecCCCCEEEeeecCCCCcCCcCcCccCCccCCCCCceEEEEECCCCCC
Confidence 69999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEeeeEEeeeCCCCCcEEEEEecC--CCcccCCCCCCCCChhHHHHHHHHHHHhhccc-CCcceeehhhhhcc
Q 028169 116 PGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF-VFIILSYSLIDYLS 192 (212)
Q Consensus 116 ~G~v~~vrvlG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~I~~fF~~YK~le-g~~v~~~~~~d~~~ 192 (212)
||++++||+||+|+|+|+||+|||||||+.+ ||+|++++|++||+++++++|+|||++||.|| ||.++.++|.+-..
T Consensus 81 pG~vi~~r~iGvl~m~Deg~~D~KiiaV~~~k~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le~gK~v~v~gw~~~~~ 160 (175)
T 2au7_A 81 PGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEA 160 (175)
T ss_dssp TTCEEEEEEEEEEEEEETTEECCEEEEEECTTTCSTTTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEEEECHHH
T ss_pred CceEEEEEEEEEEEeecCCCCccEEEEEeCCCCCcchhhCCChHHCCHHHHHHHHHHHHHhhCccCCCCeEEccccCHHH
Confidence 9999999999999999999999999999999 99999999999999999999999999999999 99999998765444
Q ss_pred ccc
Q 028169 193 QHS 195 (212)
Q Consensus 193 ~~~ 195 (212)
|..
T Consensus 161 A~~ 163 (175)
T 2au7_A 161 AKA 163 (175)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 7
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A
Probab=100.00 E-value=9.6e-64 Score=426.42 Aligned_cols=160 Identities=35% Similarity=0.570 Sum_probs=142.9
Q ss_pred cCCcccCCCCCCCCCCCCCCeeEEEEeeCCCC-CceEEEecCCCCeEEeeeccccccCccccCccccccCCCCCcceEEE
Q 028169 30 HRSVAAHPWHDLEIGPGAPAVCNCVVEIGKGG-KVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLV 108 (212)
Q Consensus 30 ~~~~~~spwHdIpl~~~~~~~vn~VVEIPrgs-~~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlv 108 (212)
..|..+|+||+||++++.|..||||||||||| ++|||+|+++|.|++||++++++.||+|||||||||++|||||||||
T Consensus 16 ~~g~~~m~~~~i~~g~~~p~~vnvvIEIP~gs~~~KyE~dk~~G~l~~DR~l~~~~~YP~NYGfIP~Tl~~DGDPLDvlv 95 (199)
T 3ld3_A 16 TQGPGSMNLDDIGSGSNAPEEVNVVIEVSQDSHPVKYEFDEKNGALWVDRFLPTAMYYPCNYGFIPNTIAGDGDPVDVLV 95 (199)
T ss_dssp ----------CCCSCTTTTTSEEEEEEECTTCCSEEEEECTTTCCEEEEEECSSSBCCSSEEEECTTCCCTTSSCCEEEE
T ss_pred cCCCccCChHHCCCCCCCCCEEEEEEEecCCCCCEEEEEecCCCCEEEEEEcCCCCcCCcccccccccccCCCCceEEEE
Confidence 47889999999999999999999999999998 59999999999999999999999999999999999999999999999
Q ss_pred ecCcccCCcceEEEEEeeeEEeeeCCCCCcEEEEEecC--CCcccCCCCCCCCChhHHHHHHHHHHHhhcccC-Ccceee
Q 028169 109 LMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSFV-FIILSY 185 (212)
Q Consensus 109 l~~~p~~~G~v~~vrvlG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~I~~fF~~YK~leg-~~v~~~ 185 (212)
|+++|+.||++++||+||+|+|+|+||+|||||||+.+ ||+|++|+|++|||++++++|+|||++||.||+ |.+..-
T Consensus 96 l~~~p~~pG~vi~vr~IGvl~MiDege~D~KIIaVp~~~~dp~~~~i~di~Dlp~~~l~~I~~fF~~YK~le~gK~v~v~ 175 (199)
T 3ld3_A 96 LARFPVMPGAVICVRPVGVLMMNDEKGEDAKVLAVPATKVDQYYGNIVNYSDLPSSFLDSISHFFSFYKKLEKDKFVSVG 175 (199)
T ss_dssp CCSSCCCTTCEEEEEEEEEEEEEETTEECCEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEE
T ss_pred ecCCCCCCceEEEEEEEEEEEEecCCCCcceEEEEECCCCCccccccCchHHCCHHHHHHHHHHHHHhcCcCCCceEEec
Confidence 99999999999999999999999999999999999999 999999999999999999999999999999984 656554
Q ss_pred hhhh
Q 028169 186 SLID 189 (212)
Q Consensus 186 ~~~d 189 (212)
+|.+
T Consensus 176 gw~~ 179 (199)
T 3ld3_A 176 CWQD 179 (199)
T ss_dssp EEEE
T ss_pred CCCC
Confidence 4433
No 8
>3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A*
Probab=100.00 E-value=1.2e-63 Score=418.07 Aligned_cols=154 Identities=37% Similarity=0.581 Sum_probs=148.3
Q ss_pred CCCCCCCCCCCCCCeeEEEEeeCCCCC-ceEEEecCCCCeEEeeeccccccCccccCccccccCCCCCcceEEEecCccc
Q 028169 36 HPWHDLEIGPGAPAVCNCVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPV 114 (212)
Q Consensus 36 spwHdIpl~~~~~~~vn~VVEIPrgs~-~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlvl~~~p~ 114 (212)
++||+||++++ |..|||||||||||+ +|||+|+++|.|++||++++++.||+|||||||||++||||||||||+++|+
T Consensus 2 m~~~~ip~~~~-p~~~nvvIEIP~gs~p~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl~~~p~ 80 (173)
T 3d53_A 2 MFIKKIKAKAN-NNEINVIIEIPMNSGPIKYEFDKESGALFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPV 80 (173)
T ss_dssp -CGGGSCSCSS-TTCEEEEEEECTTCCSEEEEECTTTCCEEEEEECCSSCCCSSEEEECTTCCCTTSSCCEEEECCSSCC
T ss_pred CchhhCCCCCC-CCeEEEEEEeCCCCCceeEEEecCCCCEEEeeecCCCCcCCcccchhhCCccCCCCceEEEEECCCcc
Confidence 48999999999 999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEEEeeeEEeeeCCCCCcEEEEEecC--CCcccCCCCCCCCChhHHHHHHHHHHHhhccc-CCcceeehhhhh
Q 028169 115 LPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF-VFIILSYSLIDY 190 (212)
Q Consensus 115 ~~G~v~~vrvlG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~I~~fF~~YK~le-g~~v~~~~~~d~ 190 (212)
.||++++||+||+|+|+|+||+|||||||+.+ ||+|++++|++|||++++++|+|||++||.|| ||.+...+|.+-
T Consensus 81 ~~G~vi~~r~iGvl~m~Dege~D~KiiaV~~~k~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le~gK~v~v~gw~~~ 159 (173)
T 3d53_A 81 VPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFEHYKDLEKGKWVKVTGWGDK 159 (173)
T ss_dssp CTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEEEECH
T ss_pred CCceEEEEEEEEEEEEccCCCccceEEEEeCCCCCcchhhcCChhHCCHHHHHHHHHHHHHHcCccCCCcEEEccCcCH
Confidence 99999999999999999999999999999999 99999999999999999999999999999999 899877665543
No 9
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A
Probab=100.00 E-value=3.3e-63 Score=415.37 Aligned_cols=157 Identities=38% Similarity=0.584 Sum_probs=146.1
Q ss_pred CCCCCCCCCCCCCeeEEEEeeCCCCCceEEEecCCCCeEEeeeccccccCccccCccccccCCCCCcceEEEecCcccCC
Q 028169 37 PWHDLEIGPGAPAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLP 116 (212)
Q Consensus 37 pwHdIpl~~~~~~~vn~VVEIPrgs~~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlvl~~~p~~~ 116 (212)
+||+||++++ |..|||||||||||++|||+|+++|.|++||++++++.||+|||||||||++||||||||||+++|+.|
T Consensus 2 ~~~~ip~~~~-p~~~nvvIEIP~gs~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl~~~p~~~ 80 (173)
T 2bqx_A 2 NLEKLEVSHD-ADSLCVVIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQA 80 (173)
T ss_dssp -----CCCEE-TTEEEEEEEECTTCSEEEEECTTTCCEEEEEECSSSCCCSSEEEECSSCCCTTSSCCEEEECCSSCCCT
T ss_pred CcccCCCCCC-CCeEEEEEEECCCCCeEEEEecCCCCEEEeeecCCCCcCcccccccccccCCCCCceEEEEECCCCCCC
Confidence 7999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEeeeEEeeeCCCCCcEEEEEecC--CCcccCCCCCCCCChhHHHHHHHHHHHhhccc-CCcceeehhhhhccc
Q 028169 117 GSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF-VFIILSYSLIDYLSQ 193 (212)
Q Consensus 117 G~v~~vrvlG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~I~~fF~~YK~le-g~~v~~~~~~d~~~~ 193 (212)
|++++||+||+|+|+|+||+|||||||+.+ ||+|++++|++|||++++++|+|||++||.++ ||.+...+|.+-..|
T Consensus 81 G~vi~~r~iGvl~m~D~g~~D~KiiaV~~~k~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le~gK~v~~~g~~~~~~A 160 (173)
T 2bqx_A 81 GSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKESA 160 (173)
T ss_dssp TCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCCTTTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEEEEEHHHH
T ss_pred ceEEEEEEEEEEEeccCCCCccEEEEEeCCCCCcchhhcCChhHCCHHHHHHHHHHHHHhccccCCCceeeCcCcCHHHH
Confidence 999999999999999999999999999999 99999999999999999999999999999999 899888777654444
Q ss_pred c
Q 028169 194 H 194 (212)
Q Consensus 194 ~ 194 (212)
.
T Consensus 161 ~ 161 (173)
T 2bqx_A 161 I 161 (173)
T ss_dssp H
T ss_pred H
Confidence 3
No 10
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} SCOP: b.40.5.0
Probab=100.00 E-value=3.7e-62 Score=410.63 Aligned_cols=151 Identities=36% Similarity=0.584 Sum_probs=142.4
Q ss_pred CCCCCCCCCCCeeEEEEeeCCCCC-ceEEEecCCCCeEEeeeccccccCccccCccccccCCCCCcceEEEecCcccCCc
Q 028169 39 HDLEIGPGAPAVCNCVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPG 117 (212)
Q Consensus 39 HdIpl~~~~~~~vn~VVEIPrgs~-~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlvl~~~p~~~G 117 (212)
|+||++++. ..|||||||||||+ +|||+|+++|.|++||++++++.||+|||||||||+|||||||||||+++|+.||
T Consensus 6 h~ip~g~~~-~~vnvvIEIP~gs~~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl~~~p~~pG 84 (178)
T 3tr4_A 6 FLVSAGKGI-DDFNVIIEIPANGGEVKYEYDKELGFLTVDRFMPTSMRYPCNYGFVPSTLAQDGDPLDVLVLTPVPVQPG 84 (178)
T ss_dssp --CCCEEET-TEEEEEEEECTTCCSEEEEEETTTTEEEEEEECCSSBCCSSEEEECTTCCCTTSSCCEEEECCSSCCCTT
T ss_pred ccCCCCCCC-CEEEEEEEecCCCCcEEEEEecCCCcEEEEEecCcCccCCccccccCCcccCCCCceEEEEECCCCCCCe
Confidence 999999887 99999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEeeeEEeeeCCCCCcEEEEEecC--CCcccCCCCCCCCChhHHHHHHHHHHHhhcccC-Ccceeehhhhh
Q 028169 118 SFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSFV-FIILSYSLIDY 190 (212)
Q Consensus 118 ~v~~vrvlG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~I~~fF~~YK~leg-~~v~~~~~~d~ 190 (212)
++++||+||+|+|+|+||+|||||||+.+ ||+|++|+|++|||++++++|+|||++||.||+ |.+...+|.+-
T Consensus 85 ~vi~~r~iGvl~m~Dege~D~KiIaVp~~~~dp~~~~i~di~dl~~~~l~~i~~fF~~YK~le~gK~v~~~g~~~~ 160 (178)
T 3tr4_A 85 VLMRVRALGIMKMEDEAGEDSKVLAVPVVKACRAYEAIQSLKDISSLLLDAISHFFERYKDLEPNKWAKVKGWEDK 160 (178)
T ss_dssp CEEEEEEEEEEEEEETTEECCEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEEEECH
T ss_pred eEEEEEEEEEEEeccCCCCcceEEEEEcCCCCchhhhcCchhhCCHHHHHHHHHHHHHHcCcCCCceeEeccCcCH
Confidence 99999999999999999999999999999 899999999999999999999999999999994 76766655433
No 11
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1
Probab=100.00 E-value=2.7e-61 Score=403.85 Aligned_cols=152 Identities=44% Similarity=0.695 Sum_probs=144.0
Q ss_pred CCCCCCCCCCeeEEEEeeCCCCCceEEEecCCCCeEEeeeccccccCccccCccccccCCCCCcceEEEecCcccCCcce
Q 028169 40 DLEIGPGAPAVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSF 119 (212)
Q Consensus 40 dIpl~~~~~~~vn~VVEIPrgs~~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlvl~~~p~~~G~v 119 (212)
+||.+.+.|..|||||||||||++|||+|+++|.|++||++++++.||+|||||||||++||||||||||+++|+.||++
T Consensus 2 ~i~~g~~~p~~~nvvIEIP~gs~~KyE~dk~~g~l~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl~~~p~~~G~v 81 (173)
T 1qez_A 2 KLSPGKNAPDVVNVLVEIPQGSNIKYEYDDEEGVIKVDRVLYTSMNYPFNYGFIPGTLEEDGDPLDVLVITNYQLYPGSV 81 (173)
T ss_dssp CCCSCTTTTTSEEEEEEECTTCCEEEEEETTTTEEEEEEECSSSBCCSSEEEECTTCCCTTSSCCEEEECCSSCCCTTCE
T ss_pred CcCCCCCCCCeEEEEEEECCCCCeEEEEecCCCCEEEEeecCCCCcCCccccccccccCCCCCceEEEEECCCCCCCccE
Confidence 46666666789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeeEEeeeCCCCCcEEEEEecC--CCcccCCCCCCCCChhHHHHHHHHHHHhhccc-CCcceeehhhhhc
Q 028169 120 LRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF-VFIILSYSLIDYL 191 (212)
Q Consensus 120 ~~vrvlG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~I~~fF~~YK~le-g~~v~~~~~~d~~ 191 (212)
++||+||+|+|+|+||+|||||||+.+ ||+|++++|++|||++++++|+|||++||.|+ ||.+...+|.+-.
T Consensus 82 i~~r~iGvl~m~Dege~D~KiiaV~~~k~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le~gK~v~~~gw~~~~ 156 (173)
T 1qez_A 82 IEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFSNIKDINDLPQATKNKIVHFFEHYKELEPGKYVKISGWGSAT 156 (173)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEEEECHH
T ss_pred EEEEEEEEEEeecCCCcccEEEEEeCCCCCcchhhcCChHHCCHHHHHHHHHHHHHhccccCCCceEEccccCHH
Confidence 999999999999999999999999999 99999999999999999999999999999999 8998776655433
No 12
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A
Probab=100.00 E-value=6.9e-60 Score=395.06 Aligned_cols=145 Identities=35% Similarity=0.695 Sum_probs=136.4
Q ss_pred CeeEEEEeeCCCCCceEEEecCCCCeEEeeeccccccCccccCccccccCCCCCcceEEEecCcccCCcceEEEEEeeeE
Q 028169 49 AVCNCVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLM 128 (212)
Q Consensus 49 ~~vn~VVEIPrgs~~KyEid~~~g~i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlvl~~~p~~~G~v~~vrvlG~L 128 (212)
-.|||||||||||++|||+|+++|.+++||++++++.||+|||||||||++||||||||||+++|++||++++||+||+|
T Consensus 11 ~~~nvvIEIP~gs~~KyE~Dk~~G~l~~DR~l~~~~~YP~NYGfIP~Tl~~DGDPlDvlvl~~~p~~pG~vi~~r~iGvl 90 (172)
T 1sxv_A 11 MQFDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMF 90 (172)
T ss_dssp CCEEEEEEECTTCCEEC-CCTTTCCCCCCEECSSSCCCSSEEEEETTCCCTTSSCCEEEECCSSCCCTTCEEEEEEEEEE
T ss_pred eEEEEEEEECCCCCeEEEEEcCCCCEEEEeecCCCCCCCcCcCccCCccCCCCCCeEEEEEcCCCcCCceEEEEEEEEEE
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeCCCCCcEEEEEecCCCcccCCCCCCCCChhHHHHHHHHHHHhhccc-CCcceeehhhhhccc
Q 028169 129 PMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF-VFIILSYSLIDYLSQ 193 (212)
Q Consensus 129 ~miD~gE~D~KIIaV~~~Dp~~~~i~di~Dl~~~~l~~I~~fF~~YK~le-g~~v~~~~~~d~~~~ 193 (212)
+|+|+||+|||||||+.+||+|++++|++|||++++++|+|||++||.|| ||.+..-+|.+-..|
T Consensus 91 ~m~Dege~D~KIIaVp~~Dp~~~~i~di~Dlp~~~l~~I~~fF~~YK~le~gK~v~v~gw~~~~~A 156 (172)
T 1sxv_A 91 RMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVKAADWVDRAEA 156 (172)
T ss_dssp EEEETTEECCEEEEEETTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEEEECHHHH
T ss_pred EecCCCCCCCEEEEEeCCCCCccccCChHHCCHHHHHHHHHHHHHhcCcCCCCeEEeCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999 888766555443333
No 13
>2l76_A Nfatc2-interacting protein; ubiquitin-like domain, structural genomics, PSI-biology, Pro structure initiative; NMR {Homo sapiens}
Probab=52.92 E-value=15 Score=27.54 Aligned_cols=64 Identities=20% Similarity=0.222 Sum_probs=41.9
Q ss_pred CCCeeEEEEeeCCCCCceEEEecCCCC------------eEEeeeccccccCccccCccccccC-CCCCcceEEEecC
Q 028169 47 APAVCNCVVEIGKGGKVKYELDKASGL------------IKVDRVLYSSVVYPHNYGFIPRTIC-EDSDPMDVLVLMQ 111 (212)
Q Consensus 47 ~~~~vn~VVEIPrgs~~KyEid~~~g~------------i~~Dr~l~~~~~yP~NYGfIPqT~~-gDgDPLDvlvl~~ 111 (212)
....+|.-|- -+|+...+.+-+.+.+ +..++.++....-..|=---|++++ +|||-+|++++.+
T Consensus 18 ~~~~IniKV~-~~g~ev~FkIK~tt~l~KL~~aYc~r~gv~~~sirFlfDG~rI~~~~TP~~L~meD~DiID~~~~~~ 94 (95)
T 2l76_A 18 TPRLFPLKIR-CRADLVRLPLRMSEPLQSVVDHMATHLGVSPSRILLLFGETELSPTATPRTLKLGVADIIDCVVLTS 94 (95)
T ss_dssp CCCCEEEEEE-CSSSEEEEEECSSSCTHHHHHHHHHHHTSCGGGEEEEETTEECCTTSCHHHHTCCSSCEEEEEECCC
T ss_pred CCCeEEEEEE-cCCcEEEEEEecCChHHHHHHHHHhhcCCChhhEEEEECCcCCCCCCCHhHcCCCCCCEEEEEEecC
Confidence 3456888888 5888899999888765 1111122222223345555667776 8999999999975
No 14
>2k8h_A Small ubiquitin protein; SUMO, post-translational modifier, signaling protein; NMR {Trypanosoma brucei}
Probab=45.29 E-value=28 Score=26.19 Aligned_cols=25 Identities=12% Similarity=0.254 Sum_probs=18.4
Q ss_pred CCeeEEEEeeCCCCCceEEEecCCC
Q 028169 48 PAVCNCVVEIGKGGKVKYELDKASG 72 (212)
Q Consensus 48 ~~~vn~VVEIPrgs~~KyEid~~~g 72 (212)
+..+++.|--.-|....+.+.+.+.
T Consensus 24 ~~~I~IkVk~~~g~~i~fkVk~~t~ 48 (110)
T 2k8h_A 24 TALVAVKVVNADGAEMFFRIKSRTA 48 (110)
T ss_dssp CCCEEEEEEETTSCCEEEEECTTSS
T ss_pred CCeEEEEEECCCCCEEEEEECCCCh
Confidence 3557777777778777888877665
No 15
>1jo6_A KCNMB2, potassium large conductance calcium-activated channel, subfamily M, beta member 2..., large; helix, ION channel, cytoplasmic PART of; NMR {Synthetic} SCOP: j.89.1.1
Probab=31.14 E-value=5.4 Score=26.32 Aligned_cols=21 Identities=19% Similarity=0.240 Sum_probs=15.9
Q ss_pred CccccCccccccC-----------CCCCcceE
Q 028169 86 YPHNYGFIPRTIC-----------EDSDPMDV 106 (212)
Q Consensus 86 yP~NYGfIPqT~~-----------gDgDPLDv 106 (212)
++|.++=+++|+. +||||+|+
T Consensus 2 ~~~~~~k~~~~~~~~~~R~iy~~~~dgd~~dk 33 (45)
T 1jo6_A 2 FIWTSGRTSSSYRHDEKRNIYQKIRDHDLLDK 33 (45)
T ss_dssp CCSSCCCCCCSSSSCSTTSSHHHHHHHHTTTS
T ss_pred cccccccceeeeccccccccccccccCCcccc
Confidence 5677777778773 58999996
No 16
>3goe_A DNA repair protein RAD60; SUMO-like domain, sumoylation, SUMO, genome stability, DNA damage, DNA recombination, nucleus; HET: DNA; 0.97A {Schizosaccharomyces pombe} PDB: 3rcz_A*
Probab=24.51 E-value=53 Score=24.06 Aligned_cols=53 Identities=9% Similarity=0.174 Sum_probs=30.9
Q ss_pred eeEEEEeeCCCCCceEEEecCCCC--------------------eEEeeeccccccCccccCccccccCCCCCcceEEE
Q 028169 50 VCNCVVEIGKGGKVKYELDKASGL--------------------IKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLV 108 (212)
Q Consensus 50 ~vn~VVEIPrgs~~KyEid~~~g~--------------------i~~Dr~l~~~~~yP~NYGfIPqT~~gDgDPLDvlv 108 (212)
.+..+.--.+...-|+++..++.. +.+|--.-.+..+|..|+. .|||-+||++
T Consensus 9 ~~~~~~~~~~~~dl~f~I~~~t~v~kLi~ayc~~~~I~~~~~IrllFDGdRLdp~~tp~Dlem------eD~D~IDvmL 81 (82)
T 3goe_A 9 LITLLLRSSKSEDLRLSIPVDFTVKDLIKRYCTEVKISFHERIRLEFEGEWLDPNDQVQSTEL------EDEDQVSVVL 81 (82)
T ss_dssp EEEEEEEESSSCCEEEEEETTSBHHHHHHHHHHHHTCCCCTTCEEEETTEECCTTSBGGGSSC------CTTCEEEEEC
T ss_pred HHHHhhhccCCCCeEEEecCCCCHHHHHHHHHHHcCCCcCceEEEEEcCcccCccCChhhhCC------cCCceeeeee
Confidence 345555566666666666655421 2222112245566666665 6999999974
No 17
>4fa8_E Macrophage colony-stimulating factor 1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3uf2_A 3uez_E 4adf_G* 1hmc_A 3ejj_A* 3uf5_A 4adq_E*
Probab=21.38 E-value=17 Score=29.42 Aligned_cols=29 Identities=14% Similarity=0.124 Sum_probs=25.7
Q ss_pred ChhHHHHHHHHHHHhhcccCCcceeehhh
Q 028169 160 PPHRLAEIRRFFEDCIHSFVFIILSYSLI 188 (212)
Q Consensus 160 ~~~~l~~I~~fF~~YK~leg~~v~~~~~~ 188 (212)
|-..|+.|+++|+.||.|--+.-|.|+++
T Consensus 109 P~~~Lekvk~v~~~~k~Ll~k~~~~~~~n 137 (147)
T 4fa8_E 109 PLQLLEKVKNVFNETKNLLDKDWNIFSKN 137 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCc
Confidence 56899999999999999988878888876
No 18
>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster}
Probab=21.12 E-value=53 Score=26.41 Aligned_cols=46 Identities=13% Similarity=0.183 Sum_probs=33.7
Q ss_pred eEEEecCcccCCcceEEEEEeeeEEeeeCCCCCcE---EEEEecCCCcccCCCCCCCCCh
Q 028169 105 DVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDK---IIAVCADDPEFRHYKDIKELPP 161 (212)
Q Consensus 105 Dvlvl~~~p~~~G~v~~vrvlG~L~miD~gE~D~K---IIaV~~~Dp~~~~i~di~Dl~~ 161 (212)
+.+|.+++|+.+|+.+.+|+.- -+..|. -|++-..||. .++. ++|+
T Consensus 36 ~givFS~RPl~~~E~~~v~I~~-------~~~~wsG~l~~GvT~~dP~--~l~~--~lP~ 84 (168)
T 2yue_A 36 RAITFSARPVRINERICVKFAE-------ISNNWNGGIRFGFTSNDPV--TLEG--TLPK 84 (168)
T ss_dssp CCEEEESSCCCSSCCEEEEEEE-------CCSSSSSCCEEEEESSCGG--GTTT--CCCS
T ss_pred ceEEEECCCCcCCCEEEEEEEe-------ecCCcceeEEEeeeecCHH--HcCC--CCCC
Confidence 5789999999999999999843 334454 6788888985 3332 5664
Done!