Query 028174
Match_columns 212
No_of_seqs 177 out of 1480
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 07:24:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028174.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028174hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 5.8E-44 1.3E-48 295.1 15.3 177 16-202 55-232 (238)
2 KOG0224 Aquaporin (major intri 100.0 1.2E-41 2.6E-46 284.0 14.2 184 11-201 75-280 (316)
3 PLN00184 aquaporin NIP1; Provi 100.0 3.7E-40 8.1E-45 281.3 18.9 173 18-198 100-275 (296)
4 PF00230 MIP: Major intrinsic 100.0 5.9E-40 1.3E-44 271.8 16.4 169 17-191 59-227 (227)
5 COG0580 GlpF Glycerol uptake f 100.0 1.9E-39 4.1E-44 267.6 19.0 174 18-196 54-240 (241)
6 PTZ00016 aquaglyceroporin; Pro 100.0 2.3E-39 5E-44 276.9 19.6 176 19-198 97-292 (294)
7 PRK05420 aquaporin Z; Provisio 100.0 2.9E-39 6.2E-44 268.2 19.2 172 20-198 51-230 (231)
8 PLN00026 aquaporin NIP; Provi 100.0 1.3E-39 2.8E-44 277.6 16.8 167 20-199 119-285 (298)
9 PLN00166 aquaporin TIP2; Provi 100.0 7.8E-39 1.7E-43 268.1 19.0 172 19-200 70-241 (250)
10 PLN00182 putative aquaporin NI 100.0 9.5E-39 2.1E-43 271.1 18.9 166 19-196 89-254 (283)
11 PLN00027 aquaporin TIP; Provis 100.0 1.5E-38 3.3E-43 267.0 18.8 170 20-199 73-242 (252)
12 PLN00167 aquaporin TIP5; Provi 100.0 4.3E-38 9.3E-43 264.3 18.5 172 20-202 75-246 (256)
13 cd00333 MIP Major intrinsic pr 100.0 3.4E-37 7.4E-42 255.7 19.4 174 18-194 47-228 (228)
14 PLN00183 putative aquaporin NI 100.0 4.3E-37 9.3E-42 260.1 17.3 170 19-201 92-261 (274)
15 TIGR00861 MIP MIP family chann 100.0 1.7E-36 3.7E-41 249.6 17.3 169 19-191 48-216 (216)
16 PLN00184 aquaporin NIP1; Provi 99.8 8.2E-19 1.8E-23 150.2 9.0 108 89-198 50-157 (296)
17 PLN00026 aquaporin NIP; Provi 99.8 8.2E-19 1.8E-23 150.0 9.0 109 87-197 65-173 (298)
18 PLN00183 putative aquaporin NI 99.7 1.8E-17 3.9E-22 140.6 8.5 107 89-197 41-147 (274)
19 PLN00182 putative aquaporin NI 99.7 5.3E-17 1.1E-21 138.3 8.3 107 89-197 38-144 (283)
20 PLN00166 aquaporin TIP2; Provi 99.7 8.6E-17 1.9E-21 135.0 8.8 107 89-197 14-125 (250)
21 PLN00167 aquaporin TIP5; Provi 99.7 1.2E-16 2.6E-21 134.5 9.6 107 89-197 18-129 (256)
22 PTZ00016 aquaglyceroporin; Pro 99.7 1.3E-16 2.8E-21 136.8 9.0 107 90-198 47-153 (294)
23 PRK05420 aquaporin Z; Provisio 99.7 2.4E-16 5.2E-21 131.0 8.8 103 93-197 2-105 (231)
24 cd00333 MIP Major intrinsic pr 99.7 2.7E-16 5.8E-21 130.5 8.6 106 94-201 1-107 (228)
25 PLN00027 aquaporin TIP; Provis 99.6 6.4E-16 1.4E-20 130.0 9.3 106 90-197 17-127 (252)
26 KOG0224 Aquaporin (major intri 99.6 6.2E-16 1.4E-20 130.0 7.1 112 91-204 30-142 (316)
27 KOG0223 Aquaporin (major intri 99.6 2.1E-15 4.6E-20 125.1 8.0 109 88-198 6-114 (238)
28 COG0580 GlpF Glycerol uptake f 99.6 3.8E-15 8.1E-20 123.4 8.6 110 91-202 3-115 (241)
29 TIGR00861 MIP MIP family chann 99.6 4.5E-15 9.8E-20 122.2 7.1 99 98-198 1-104 (216)
30 PF00230 MIP: Major intrinsic 99.5 1.7E-14 3.8E-19 119.4 4.6 107 90-198 5-117 (227)
31 PRK11562 nitrite transporter N 83.8 26 0.00057 29.9 12.8 161 39-210 90-264 (268)
32 COG2116 FocA Formate/nitrite f 72.8 59 0.0013 27.7 11.8 154 37-200 94-262 (265)
33 PRK10805 formate transporter; 62.8 1E+02 0.0022 26.6 13.2 82 32-114 93-183 (285)
34 PF03033 Glyco_transf_28: Glyc 60.9 3.3 7.1E-05 30.6 0.4 19 26-44 7-25 (139)
35 PF04632 FUSC: Fusaric acid re 58.7 1.6E+02 0.0036 27.7 13.1 44 32-75 371-414 (650)
36 COG0730 Predicted permeases [G 49.9 1.5E+02 0.0032 24.5 11.7 33 40-72 66-98 (258)
37 PRK12446 undecaprenyldiphospho 43.1 11 0.00024 33.1 0.9 18 26-43 10-27 (352)
38 PF14990 DUF4516: Domain of un 42.5 60 0.0013 20.1 3.8 35 43-77 3-37 (47)
39 PRK11427 multidrug efflux syst 42.1 3.4E+02 0.0074 26.5 11.4 29 46-74 394-422 (683)
40 COG3301 NrfD Formate-dependent 39.4 2.3E+02 0.005 24.6 8.2 25 47-71 133-157 (305)
41 PF09622 DUF2391: Putative int 39.0 77 0.0017 27.1 5.3 73 36-108 80-156 (267)
42 PRK14218 camphor resistance pr 35.5 1.9E+02 0.0042 21.8 10.7 120 46-193 5-125 (133)
43 TIGR00790 fnt formate/nitrite 33.2 2.8E+02 0.0061 23.0 12.0 74 39-112 75-157 (239)
44 PF02537 CRCB: CrcB-like prote 32.8 1.9E+02 0.0041 20.8 8.5 109 58-190 5-114 (117)
45 PRK09713 focB putative formate 31.6 3.4E+02 0.0073 23.3 12.7 75 40-114 99-182 (282)
46 PRK14217 camphor resistance pr 30.6 2.4E+02 0.0052 21.3 10.0 112 58-194 10-122 (134)
47 PRK14212 camphor resistance pr 27.2 2.7E+02 0.0058 20.8 9.5 112 58-194 8-120 (128)
48 PF14034 Spore_YtrH: Sporulati 26.5 41 0.0009 24.4 1.4 49 149-197 53-101 (102)
49 PRK14198 camphor resistance pr 24.9 2.9E+02 0.0063 20.5 9.1 110 58-192 7-117 (124)
50 PRK09979 putative rho operon l 23.4 24 0.00053 19.3 -0.2 15 25-39 5-19 (33)
51 COG2116 FocA Formate/nitrite f 23.4 4.2E+02 0.0092 22.6 7.2 62 127-193 65-131 (265)
52 PRK14202 camphor resistance pr 23.3 3.2E+02 0.0069 20.3 8.7 111 56-192 10-121 (128)
53 PF01925 TauE: Sulfite exporte 22.5 2.2E+02 0.0048 22.9 5.3 47 32-78 178-227 (240)
54 PF14034 Spore_YtrH: Sporulati 22.2 2.4E+02 0.0053 20.4 4.7 46 28-73 53-100 (102)
55 PRK14206 camphor resistance pr 22.2 3.3E+02 0.0073 20.2 9.5 111 58-191 7-118 (127)
56 PRK14208 camphor resistance pr 21.3 3.5E+02 0.0076 20.1 8.8 110 58-192 8-118 (126)
57 PRK14213 camphor resistance pr 20.5 2.5E+02 0.0055 20.6 4.8 27 45-71 90-116 (118)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.8e-44 Score=295.05 Aligned_cols=177 Identities=49% Similarity=0.803 Sum_probs=159.7
Q ss_pred HHHHHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhH
Q 028174 16 SDLVTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSA 95 (212)
Q Consensus 16 ~~~~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (212)
...+.+++|+|||||+|||||+++++.|++++.+++.|+.+|++|+++|+.+++.+.+...+......+.+.++.+.+|+
T Consensus 55 v~v~i~~~g~iSGaH~NPAVT~a~~~~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~ 134 (238)
T KOG0223|consen 55 VFVLVYSTGHISGAHFNPAVTLAFAVGGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQG 134 (238)
T ss_pred HHHHHhhhccccccccCHHHHHHHHHhCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchh
Confidence 45566788999999999999999999999999999999999999999999999999988644444556677889999999
Q ss_pred HHHHHHHHHHHHHHHHH-hccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcce
Q 028174 96 LGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW 174 (212)
Q Consensus 96 ~~~E~~~T~ilv~~v~~-~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~ 174 (212)
++.|++.||.|++++++ .+|+++. .+.|+.+|+++.+.+++.+++||++|||||+|||++..+ .|+++|
T Consensus 135 ~~~E~ilTf~Lv~~v~~~a~d~~~~-------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~---~w~~hw 204 (238)
T KOG0223|consen 135 LVIEIILTFILVFTVFATATDPRRS-------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG---SWDDHW 204 (238)
T ss_pred HHHHHHHHHHHhheeEEEeecCCCc-------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc---CCCcEE
Confidence 99999999999999998 6676654 478999999999999999999999999999999999986 599999
Q ss_pred ehhhhhHHHHHHHHHHHHHHcchhhhhh
Q 028174 175 IFWVGPFVGALAAAAYHQYILRAAAIKA 202 (212)
Q Consensus 175 vy~v~p~lGaila~ll~~~l~~~~~~~~ 202 (212)
+||++|++|+++++++|+.++.+++.|+
T Consensus 205 iYwvgP~~Ga~~a~~~y~~v~~~~~~~~ 232 (238)
T KOG0223|consen 205 IYWVGPLLGAILAALIYRLVFIPDESEP 232 (238)
T ss_pred EEEhhHHHHHHHHHHHHHHhccCccccc
Confidence 9999999999999999999998874433
No 2
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-41 Score=284.03 Aligned_cols=184 Identities=27% Similarity=0.419 Sum_probs=161.3
Q ss_pred hHHHHHHHHHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCc-------
Q 028174 11 QLVCLSDLVTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGA------- 83 (212)
Q Consensus 11 ~~v~~~~~~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~------- 83 (212)
..|++++++++. |||||+|||||+++++.||+||+|++.|+++|++||++|++.+|.+|++.+..++++.
T Consensus 75 ~av~~gVyvag~---iSGgHlNPAVS~a~~~~g~~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~ 151 (316)
T KOG0224|consen 75 FAVMMGVYVAGR---ISGGHLNPAVSLAMCILGRLPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPK 151 (316)
T ss_pred HHHHHHHHhhcc---ccccccCHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCc
Confidence 467888888776 9999999999999999999999999999999999999999999999999888776542
Q ss_pred -------cccCCCCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchh
Q 028174 84 -------NTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPAR 156 (212)
Q Consensus 84 -------~~~~~~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~ 156 (212)
+.|.+..+.+++|+.|+++|.+|+.++++++|+++. .+ ..+.|+.+|+.+.++.++.+.++|..+||||
T Consensus 152 aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l~aI~D~rN~-~p---~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPAR 227 (316)
T KOG0224|consen 152 ATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCLFAITDKRNP-IP---TGLHPLVIGILVVAIGMSLGYNTGYAINPAR 227 (316)
T ss_pred cceEEEeecCchHhhhhHHHHHHHHHHHHHHhheeEEecCCCC-CC---cchhHHHHHHHHHHHHHHhhcccCcccCccc
Confidence 235678999999999999999999999999999883 33 5688999999999999999999999999999
Q ss_pred hHHHHHHhc-----CCCCC---CcceehhhhhHHHHHHHHHHHHHHcchhhhh
Q 028174 157 SFGAAVIYN-----NDKAW---DDHWIFWVGPFVGALAAAAYHQYILRAAAIK 201 (212)
Q Consensus 157 ~lg~~l~~~-----~~~~~---~~~~vy~v~p~lGaila~ll~~~l~~~~~~~ 201 (212)
||+||++.. .+..+ .+.|++|++|++|+++++++|++++..+.++
T Consensus 228 DlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai~G~~iY~~~Ig~h~~~ 280 (316)
T KOG0224|consen 228 DLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAILGGWIYDFFIGFHIPR 280 (316)
T ss_pred ccchHHHHHHHhcchhhcccCCceeeeeehhhhhhhhhhhhhheeeeeccCCC
Confidence 999999931 12222 4678999999999999999999998765553
No 3
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=3.7e-40 Score=281.32 Aligned_cols=173 Identities=25% Similarity=0.415 Sum_probs=145.8
Q ss_pred HHHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCC---ccccCCCCchhh
Q 028174 18 LVTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGG---ANTVASGYNKGS 94 (212)
Q Consensus 18 ~~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 94 (212)
+.+..+++|||||+|||||+++++.|+++|.+.+.|+++|++|+++|+.+++.+++...+..... .....+..+.++
T Consensus 100 ~~i~~~g~iSGaH~NPAVTla~al~g~~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~ 179 (296)
T PLN00184 100 VLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQ 179 (296)
T ss_pred HHHHHhcCCCccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHH
Confidence 33446789999999999999999999999999999999999999999999999986543221111 111223458899
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcce
Q 028174 95 ALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHW 174 (212)
Q Consensus 95 ~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~ 174 (212)
+++.|+++|++|+++++++.++++.. ....|+.+|+++.+.+++.+++||++|||||||||+++.+ .|+++|
T Consensus 180 af~~E~i~TfvLv~~il~~~~~~~~~-----~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~---~~~~~W 251 (296)
T PLN00184 180 AFVMEFIVTFYLMFIISGVATDNRAI-----GELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG---CYKGIW 251 (296)
T ss_pred HHHHHHHHHHHHHHHHHheeccCcCC-----CcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh---cccccc
Confidence 99999999999999999876654321 2367899999999999999999999999999999999875 688999
Q ss_pred ehhhhhHHHHHHHHHHHHHHcchh
Q 028174 175 IFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 175 vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
+||++|++|+++++++|+++...+
T Consensus 252 Vy~vgPilGa~laal~y~~l~~~~ 275 (296)
T PLN00184 252 IYIVAPTLGAIAGAWVYNTVRYTD 275 (296)
T ss_pred hHHhHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999997643
No 4
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=5.9e-40 Score=271.84 Aligned_cols=169 Identities=39% Similarity=0.620 Sum_probs=148.7
Q ss_pred HHHHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHH
Q 028174 17 DLVTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSAL 96 (212)
Q Consensus 17 ~~~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (212)
....+.++++||||+||+||++.++.|++++++++.|+++|++|+++|+.+++.++++.........+.+.++.+.++++
T Consensus 59 ~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 138 (227)
T PF00230_consen 59 AALIYAFGPISGAHFNPAVTLAFALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAF 138 (227)
T ss_dssp HHHHHHHHHHHTSS-SHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHH
T ss_pred hhhhhhhhhccccccccchhhheeeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhh
Confidence 34555778899999999999999999999999999999999999999999999999886433334455677888999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceeh
Q 028174 97 GAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIF 176 (212)
Q Consensus 97 ~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy 176 (212)
+.|+++|++|+++++...++++.... ..+.|+.+|+.+.+..+..++.||+.+||||+++++++.. .|+++|+|
T Consensus 139 ~~E~~~t~il~~~i~~~~~~~~~~~~---~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~---~~~~~wvy 212 (227)
T PF00230_consen 139 FSEFIGTFILVLVILAVADDKRKFPL---GPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSG---IWDYFWVY 212 (227)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTSSSTS---SGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHT---HHTTTTHH
T ss_pred hhhhhhhhHHHhhhhhhccccccccc---ccccceeEEEEEeecccccccccccccCchhhcCceeecc---cCCeEEEE
Confidence 99999999999999999988876542 2368999999999999999999999999999999999976 49999999
Q ss_pred hhhhHHHHHHHHHHH
Q 028174 177 WVGPFVGALAAAAYH 191 (212)
Q Consensus 177 ~v~p~lGaila~ll~ 191 (212)
|++|++|+++|+++|
T Consensus 213 ~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 213 WVGPFIGAILAALLY 227 (227)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred EehHHHHHHHHHhhC
Confidence 999999999999987
No 5
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=267.59 Aligned_cols=174 Identities=34% Similarity=0.515 Sum_probs=146.4
Q ss_pred HHHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCC------CccccCCC-C
Q 028174 18 LVTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG------GANTVASG-Y 90 (212)
Q Consensus 18 ~~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~------~~~~~~~~-~ 90 (212)
+.+..+++|||||+|||||+++++.|++||++++.||++|++||++|+.++|.++++.++..+. +...+.|+ .
T Consensus 54 ~~iy~~g~iSGaHlNPAVTi~la~~g~fp~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~ 133 (241)
T COG0580 54 VAIYAFGGISGAHLNPAVTIALAVRGRFPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGY 133 (241)
T ss_pred HHHHhccCcCccccChHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcc
Confidence 3344567799999999999999999999999999999999999999999999999987665541 12222333 5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhc---C-
Q 028174 91 NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN---N- 166 (212)
Q Consensus 91 ~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~---~- 166 (212)
+..++++.|+++|++|++.+++..++++. + ....|+.+|+.+....++.++.||..+|||||+|||+... .
T Consensus 134 ~~~~~fl~E~v~T~~L~~~Ila~~~~~~~-~----~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~ 208 (241)
T COG0580 134 SLGQAFLIEFVGTFVLVLGILALTDDGNA-N----AGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWA 208 (241)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhccCcc-c----ccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcc
Confidence 78899999999999999999998875544 2 3488999999999999999999999999999999999542 1
Q ss_pred --CCCCCcceehhhhhHHHHHHHHHHHHHHcc
Q 028174 167 --DKAWDDHWIFWVGPFVGALAAAAYHQYILR 196 (212)
Q Consensus 167 --~~~~~~~~vy~v~p~lGaila~ll~~~l~~ 196 (212)
..++.|.|+||++|++|+++|+++|+.++.
T Consensus 209 ~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 209 ANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred cCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 112258999999999999999999998765
No 6
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=2.3e-39 Score=276.91 Aligned_cols=176 Identities=26% Similarity=0.366 Sum_probs=148.5
Q ss_pred HHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCC-------------ccc
Q 028174 19 VTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGG-------------ANT 85 (212)
Q Consensus 19 ~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~-------------~~~ 85 (212)
....++++||||+|||||++.++.|+++|.+.+.|+++|++|+++|++++|.++++.++..+.+ ...
T Consensus 97 ~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 176 (294)
T PTZ00016 97 GLLVSAGISGGHLNPAVTLGNAVFGKFPWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFA 176 (294)
T ss_pred HHHHhcccCcCccCHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceee
Confidence 3446788999999999999999999999999999999999999999999999998755433211 112
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhc
Q 028174 86 VASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN 165 (212)
Q Consensus 86 ~~~~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~ 165 (212)
+.++.+..++++.|+++|++|+++++++.|+++... ....|+.+|+.+.+.+++.++.||+++||||||||+++..
T Consensus 177 t~p~~s~~~a~~~E~i~T~iLv~~ila~~d~~~~~~----~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~ 252 (294)
T PTZ00016 177 TYPREGNFYAIFSELILTAILLLVILAITDPNNCPA----FNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSA 252 (294)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHhccCccCCC----cCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHH
Confidence 234677899999999999999999999988766432 2357999999999999999999999999999999999862
Q ss_pred ---CCCCCC----cceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 166 ---NDKAWD----DHWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 166 ---~~~~~~----~~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
+...|+ ++|+||++|++|+++|+++|+++++++
T Consensus 253 ~~~g~~~~~~~~~~~WVy~vgP~vGa~~aally~~ll~~~ 292 (294)
T PTZ00016 253 ILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYDKFIPPL 292 (294)
T ss_pred HhccccccCcCCceeeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 222343 689999999999999999999998765
No 7
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=2.9e-39 Score=268.18 Aligned_cols=172 Identities=32% Similarity=0.583 Sum_probs=144.0
Q ss_pred HhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhh--hhcC-----CCccc-cCCCCc
Q 028174 20 TGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEY--NSLG-----GGANT-VASGYN 91 (212)
Q Consensus 20 ~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~--~~~~-----~~~~~-~~~~~~ 91 (212)
..+++++||+|+|||||++.++.|+++|++.+.|+++|++|+++|+.+++.++++.. +..+ .+... .....+
T Consensus 51 i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (231)
T PRK05420 51 AYAVGHISGGHFNPAVSVGLWAGGRFPAKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYS 130 (231)
T ss_pred HHHHhCcccccCCHHHHHHHHHhCCCCHHHhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCccc
Confidence 346789999999999999999999999999999999999999999999998886432 1110 00000 112457
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCC
Q 028174 92 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWD 171 (212)
Q Consensus 92 ~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~ 171 (212)
..++++.|+++|++|+++++...|+++. ....|+.+|+.+....++.++.||+++||||||+|+++.+ +..|+
T Consensus 131 ~~~~~~~E~v~T~iLv~~i~~~~~~~~~------~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g-~~~~~ 203 (231)
T PRK05420 131 LLAALVCEVVLTAFFLLVILGATDKRAP------AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG-GWALE 203 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCC------CcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhC-CCCcc
Confidence 8899999999999999999998886542 3367999999999999999999999999999999999974 23456
Q ss_pred cceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 172 DHWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 172 ~~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
++|+||++|++|+++++++|+++++++
T Consensus 204 ~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 204 QLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred ceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 899999999999999999999998754
No 8
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=1.3e-39 Score=277.58 Aligned_cols=167 Identities=28% Similarity=0.437 Sum_probs=143.8
Q ss_pred HhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHHH
Q 028174 20 TGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAE 99 (212)
Q Consensus 20 ~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 99 (212)
...+++|||||+|||||++.++.|+++|.+.+.|+++|++|+++|+++++.++++... .+. ..++.+.+++++.|
T Consensus 119 i~~~g~ISGaHlNPAVTla~al~g~~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~---~g~--t~p~~s~~~a~~~E 193 (298)
T PLN00026 119 ILSTGHISGAHLNPSLTIAFAALRHFPWKHVPAYIAAQVSASICASFALKGVFHPFMS---GGV--TVPSVSTGQAFALE 193 (298)
T ss_pred HHHhhccCccccCHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---Cce--eeecccHHHHHHHH
Confidence 3467889999999999999999999999999999999999999999999999876321 122 22467889999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehhhh
Q 028174 100 IIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVG 179 (212)
Q Consensus 100 ~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~v~ 179 (212)
+++|++|++++++..++++.. ....++.+|+.+.+.+++.++.||+++||||||+|+++.+ +|+++|+||++
T Consensus 194 fi~TfiLv~vi~~v~~~~~~~-----~~~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~---~~~~~wVy~va 265 (298)
T PLN00026 194 FIITFNLLFVVTAVATDTRAV-----GELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG---NYRAIWIYLVA 265 (298)
T ss_pred HHHHHHHHHhheeeecCCCCc-----CCccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC---CchheeHHHHH
Confidence 999999999999765443321 2356899999999999999999999999999999999864 79999999999
Q ss_pred hHHHHHHHHHHHHHHcchhh
Q 028174 180 PFVGALAAAAYHQYILRAAA 199 (212)
Q Consensus 180 p~lGaila~ll~~~l~~~~~ 199 (212)
|++|+++|+++|+++..+++
T Consensus 266 PilGAilga~ly~~~~~~~~ 285 (298)
T PLN00026 266 PTLGALAGAGTYTAVKLREE 285 (298)
T ss_pred HHHHHHHHHHHHHHHhCccc
Confidence 99999999999999865543
No 9
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=7.8e-39 Score=268.09 Aligned_cols=172 Identities=35% Similarity=0.576 Sum_probs=146.3
Q ss_pred HHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHH
Q 028174 19 VTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGA 98 (212)
Q Consensus 19 ~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (212)
...+++++||+|+|||+|++.++.|+++|.+.+.|+++|++|+++|+.+.+.++++.. .......++.+.+++++.
T Consensus 70 ~i~~~g~iSGah~NPAvt~~~~l~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 145 (250)
T PLN00166 70 GVSIAANISGGHLNPAVTLGLAIGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGES----VPTHGVAAGLGAIEGVVM 145 (250)
T ss_pred HHHHHhcccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCC----CcccccCCCCcHHHHHHH
Confidence 3456788999999999999999999999999999999999999999999988875421 111223456788999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehhh
Q 028174 99 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWV 178 (212)
Q Consensus 99 E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~v 178 (212)
|+++|++|++++++..+++++... ....|+.+|+.+...+++.++.||+++||||||||+++.+ .|+++|+||+
T Consensus 146 E~v~Tf~Lv~~i~~~~~~~~~~~~---~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~---~~~~~wvywv 219 (250)
T PLN00166 146 EIVVTFALVYTVYATAADPKKGSL---GTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG---DFSQIWIYWV 219 (250)
T ss_pred HHHHHHHHHHHHHHhccccccccc---ccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC---CCcccchhhH
Confidence 999999999999987665443211 3478999999999999999999999999999999999865 6999999999
Q ss_pred hhHHHHHHHHHHHHHHcchhhh
Q 028174 179 GPFVGALAAAAYHQYILRAAAI 200 (212)
Q Consensus 179 ~p~lGaila~ll~~~l~~~~~~ 200 (212)
+|++|+++++++|+.++.+..+
T Consensus 220 gPi~Ga~~aa~~y~~l~~~~~~ 241 (250)
T PLN00166 220 GPLVGGALAGLIYGDVFIGSYA 241 (250)
T ss_pred HHHHHHHHHHHHHHHHhcccCC
Confidence 9999999999999988764443
No 10
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=9.5e-39 Score=271.14 Aligned_cols=166 Identities=27% Similarity=0.447 Sum_probs=142.6
Q ss_pred HHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHH
Q 028174 19 VTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGA 98 (212)
Q Consensus 19 ~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (212)
....++++||||+|||||+++++.|+++|.+.+.|+++|++|+++|+++++.+++.... +.....++.+.+++++.
T Consensus 89 ~i~~~g~iSGah~NPAVTla~~~~~~~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~----~~~~~~p~~s~~~a~~~ 164 (283)
T PLN00182 89 MIYSTGHISGAHFNPAVTVTFAIFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPE----AFFGTTPTDSSGQALVA 164 (283)
T ss_pred HHHHhcCCCccccCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----ceeeCCCCcchHHHHHH
Confidence 33467899999999999999999999999999999999999999999999999854211 11223345678999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehhh
Q 028174 99 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWV 178 (212)
Q Consensus 99 E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~v 178 (212)
|+++|++|++++++..++++.. ....++.+|+.+.+.+++.+++||+++||||||+|+++.+ .|.++|+||+
T Consensus 165 E~l~TfiLv~~i~~~~~~~~~~-----~~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~---~~~~~wvY~v 236 (283)
T PLN00182 165 EIIISFLLMFVISGVATDSRAV-----GELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG---RYKGIWVYIV 236 (283)
T ss_pred HHHHHHHHHHHHHhheeccccC-----CcchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc---cccceeHHHH
Confidence 9999999999999875544321 2357899999999999999999999999999999999864 6899999999
Q ss_pred hhHHHHHHHHHHHHHHcc
Q 028174 179 GPFVGALAAAAYHQYILR 196 (212)
Q Consensus 179 ~p~lGaila~ll~~~l~~ 196 (212)
+|++|+++|+++|+++..
T Consensus 237 ap~lGA~lgally~~l~~ 254 (283)
T PLN00182 237 GPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999999974
No 11
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=1.5e-38 Score=266.98 Aligned_cols=170 Identities=35% Similarity=0.584 Sum_probs=144.6
Q ss_pred HhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHHH
Q 028174 20 TGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAE 99 (212)
Q Consensus 20 ~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 99 (212)
...++++||+|+|||+|++.++.|+++|.+.+.|+++|++|+++|+.+.+...++.. .+.....++.+.+++++.|
T Consensus 73 i~~~~~iSGah~NPAvtl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~E 148 (252)
T PLN00027 73 VSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLE----TSAFSLSSGVGVWNAFVFE 148 (252)
T ss_pred HHHHcccCccccChHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc----cccccCCCCccHHHHHHHH
Confidence 336678999999999999999999999999999999999999999999987765421 1223344677899999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehhhh
Q 028174 100 IIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVG 179 (212)
Q Consensus 100 ~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~v~ 179 (212)
+++||+|+++++....++++... ....|+.+|+.+...+++.++.||+++||||||||+++.+ .|+++|+||++
T Consensus 149 ~i~Tf~Lv~~i~~~~~~~~~~~~---~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~---~~~~~wvy~vg 222 (252)
T PLN00027 149 IVMTFGLVYTVYATAVDPKKGDL---GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW---TWTNHWVYWAG 222 (252)
T ss_pred HHHHHHHHHHHHHhccccccCCc---cchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh---cchhhhHHHHH
Confidence 99999999999987543332211 3478999999999999999999999999999999999975 69999999999
Q ss_pred hHHHHHHHHHHHHHHcchhh
Q 028174 180 PFVGALAAAAYHQYILRAAA 199 (212)
Q Consensus 180 p~lGaila~ll~~~l~~~~~ 199 (212)
|++|+++++++|++++.+++
T Consensus 223 P~~Ga~laa~~y~~l~~~~~ 242 (252)
T PLN00027 223 PLIGGGIAGLVYELIFIGST 242 (252)
T ss_pred HHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999986543
No 12
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=4.3e-38 Score=264.32 Aligned_cols=172 Identities=30% Similarity=0.464 Sum_probs=147.0
Q ss_pred HhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHHH
Q 028174 20 TGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAE 99 (212)
Q Consensus 20 ~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 99 (212)
..+++++||+|+|||||++.++.|+++|++.+.|+++|++|+++|+.+++.++++... +.+...++.+.+++++.|
T Consensus 75 i~~~g~iSGah~NPAvtl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~----~~~~~~~~~s~~~~~~~E 150 (256)
T PLN00167 75 VYIAANISGGHVNPAVTFGMAVGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHV----PTYKIAEEMTGFGASVLE 150 (256)
T ss_pred HHHhhcccccccCHHHHHHHHHhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccc----cccccCcccchHHHHHHH
Confidence 3467889999999999999999999999999999999999999999999888654211 112223455778899999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehhhh
Q 028174 100 IIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVG 179 (212)
Q Consensus 100 ~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~v~ 179 (212)
+++|++|++++++..++++... +...|+.+|+.+....++.++.||+.+||||||+|+++.+ .|+++|+||++
T Consensus 151 ~i~T~~L~~~i~~~~~~~~~~~----~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~---~~~~~wvywvg 223 (256)
T PLN00167 151 GVLTFGLVYTVYAAGDPRRGLL----GAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG---SFKNQAVYWVG 223 (256)
T ss_pred HHHHHHHHHHHHHhccccccCC----CCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc---CccCcEEEeHH
Confidence 9999999999998887655321 3467999999999999999999999999999999999864 68999999999
Q ss_pred hHHHHHHHHHHHHHHcchhhhhh
Q 028174 180 PFVGALAAAAYHQYILRAAAIKA 202 (212)
Q Consensus 180 p~lGaila~ll~~~l~~~~~~~~ 202 (212)
|++|+++++++|++++.++.+++
T Consensus 224 P~~Ga~l~a~~y~~l~~~~~~~~ 246 (256)
T PLN00167 224 PLLGGAVAGLLYDNVVFPTQDDR 246 (256)
T ss_pred HHHHHHHHHHHHHHHhCCCcCCC
Confidence 99999999999999997655544
No 13
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=3.4e-37 Score=255.73 Aligned_cols=174 Identities=40% Similarity=0.693 Sum_probs=149.1
Q ss_pred HHHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCc--------cccCCC
Q 028174 18 LVTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGA--------NTVASG 89 (212)
Q Consensus 18 ~~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~ 89 (212)
.....++++||+|+|||+|++.++.|+++|.+.+.|+++|++|+++|+.+++.++++.++...... +.+.++
T Consensus 47 ~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (228)
T cd00333 47 VLVYAVGHISGGHINPAVTLALAVGGRFPLIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPG 126 (228)
T ss_pred HHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCC
Confidence 334567899999999999999999999999999999999999999999999999988665433221 234566
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCC
Q 028174 90 YNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKA 169 (212)
Q Consensus 90 ~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~ 169 (212)
.+.+++++.|+++|++|++.++...++++.... ....++.+|+.+.+.+++.+++||+++|||||+++++..+...+
T Consensus 127 ~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~~---~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~ 203 (228)
T cd00333 127 VSNGNAFFVEFIGTFILVLVVFATTDDPNGPPP---GGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARH 203 (228)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccccccCCC---CCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccc
Confidence 789999999999999999999988776543211 44679999999999999999999999999999999998762226
Q ss_pred CCcceehhhhhHHHHHHHHHHHHHH
Q 028174 170 WDDHWIFWVGPFVGALAAAAYHQYI 194 (212)
Q Consensus 170 ~~~~~vy~v~p~lGaila~ll~~~l 194 (212)
|+++|+||++|++|+++|+++|+++
T Consensus 204 ~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 204 WHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred cceeehhhhHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999864
No 14
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=4.3e-37 Score=260.11 Aligned_cols=170 Identities=26% Similarity=0.366 Sum_probs=145.1
Q ss_pred HHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHH
Q 028174 19 VTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGA 98 (212)
Q Consensus 19 ~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (212)
....++++||||+|||+|++.++.|+++|.+.+.|+++|++|+++|+.+++.+++... ......+..+.+++++.
T Consensus 92 ~i~~~g~vSGah~NPAvTla~~l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-----~~~~~~p~~~~~~~~~~ 166 (274)
T PLN00183 92 VVFSIGSISGAHVNPSVTIAFATFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKA-----DLMTTKPAQGCSSAFWV 166 (274)
T ss_pred HHHHhhccCccccCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----ccccCCCcccHHHHHHH
Confidence 3346789999999999999999999999999999999999999999999988876421 11122344567899999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehhh
Q 028174 99 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWV 178 (212)
Q Consensus 99 E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~v 178 (212)
|+++|++|++.+++..+++++. ....++.+|+.+.+.+++.+++||+++||||+|+|++.. ..|+++|+||+
T Consensus 167 E~v~T~iLv~~i~~~~~~~~~~-----~~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~---~~~~~~wvy~v 238 (274)
T PLN00183 167 EFIATFIVMFLAASLTSQPQSL-----GHLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS---WDFKDIWIYIT 238 (274)
T ss_pred HHHHHHHHHHhhheeeccccCC-----CCceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC---CChhheehHHH
Confidence 9999999999999887765322 235689999999999999999999999999999999985 37999999999
Q ss_pred hhHHHHHHHHHHHHHHcchhhhh
Q 028174 179 GPFVGALAAAAYHQYILRAAAIK 201 (212)
Q Consensus 179 ~p~lGaila~ll~~~l~~~~~~~ 201 (212)
+|++|+++++++||+++.++...
T Consensus 239 apilGailaa~l~~~l~~~~~~~ 261 (274)
T PLN00183 239 APTIGAVAGALMFHLLRLRTQPC 261 (274)
T ss_pred HHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999998765443
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=1.7e-36 Score=249.63 Aligned_cols=169 Identities=40% Similarity=0.711 Sum_probs=142.4
Q ss_pred HHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHH
Q 028174 19 VTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGA 98 (212)
Q Consensus 19 ~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (212)
....++++||+|+|||+|++.++.|+++|.+.+.|+++|++|+++|+.+++.++++.++..........++.+.+++++.
T Consensus 48 ~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (216)
T TIGR00861 48 LVYCVGGISGAHLNPAVTIALLLGRRFPLKRVPVYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFV 127 (216)
T ss_pred HHHHHhcccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHH
Confidence 33466889999999999999999999999999999999999999999999999877542111111222455788999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehhh
Q 028174 99 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWV 178 (212)
Q Consensus 99 E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~v 178 (212)
|+++|++|+++++...+++++... ....++.+|+.+...+++.+++||+++|||||++++++.+ ..+|+++|+||+
T Consensus 128 E~i~T~~lv~~~~~~~~~~~~~~~---~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~-~~~~~~~~vy~v 203 (216)
T TIGR00861 128 EFIGTAILVLVIFATTDPRNRVPR---GGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAG-LAGWGNHWVYWV 203 (216)
T ss_pred HHHHHHHHHHHHheeecCCCCCCC---CccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhc-cccccceeHHHH
Confidence 999999999999988776443221 2368999999999999999999999999999999999864 357999999999
Q ss_pred hhHHHHHHHHHHH
Q 028174 179 GPFVGALAAAAYH 191 (212)
Q Consensus 179 ~p~lGaila~ll~ 191 (212)
+|++|+++++++|
T Consensus 204 ap~~Ga~~a~~~y 216 (216)
T TIGR00861 204 GPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999875
No 16
>PLN00184 aquaporin NIP1; Provisional
Probab=99.77 E-value=8.2e-19 Score=150.16 Aligned_cols=108 Identities=19% Similarity=0.180 Sum_probs=87.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCC
Q 028174 89 GYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDK 168 (212)
Q Consensus 89 ~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~ 168 (212)
+.+.++.+++|+++||+|++++++....+............++.+|+++++.+++++++||+|+|||||+++++..+ .
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~--~ 127 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGR--F 127 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCC--C
Confidence 44578899999999999999998765432221111112234667799999999999999999999999999999653 7
Q ss_pred CCCcceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 169 AWDDHWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 169 ~~~~~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
+|.+.|+||++|++|+++|+++++.++..+
T Consensus 128 ~~~~~~~YiiaQllGA~lga~~~~~l~~~~ 157 (296)
T PLN00184 128 PLKQVPAYVISQVIGSTLAAATLRLLFGLD 157 (296)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 899999999999999999999999988643
No 17
>PLN00026 aquaporin NIP; Provisional
Probab=99.77 E-value=8.2e-19 Score=149.99 Aligned_cols=109 Identities=19% Similarity=0.308 Sum_probs=88.4
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcC
Q 028174 87 ASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNN 166 (212)
Q Consensus 87 ~~~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~ 166 (212)
.++.+.+|.+++||++||+|++++++....+............++.+|+++++.+++++++||+|+||||++++++..+
T Consensus 65 ~~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~- 143 (298)
T PLN00026 65 PPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRH- 143 (298)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCC-
Confidence 3466788999999999999999998643222111111112234689999999999999999999999999999999754
Q ss_pred CCCCCcceehhhhhHHHHHHHHHHHHHHcch
Q 028174 167 DKAWDDHWIFWVGPFVGALAAAAYHQYILRA 197 (212)
Q Consensus 167 ~~~~~~~~vy~v~p~lGaila~ll~~~l~~~ 197 (212)
..|.+.|+||++|++|+++|+++++.++++
T Consensus 144 -~~~~~~~~YiiaQilGAi~aa~~~~~~~~~ 173 (298)
T PLN00026 144 -FPWKHVPAYIAAQVSASICASFALKGVFHP 173 (298)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 789999999999999999999999998865
No 18
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.72 E-value=1.8e-17 Score=140.58 Aligned_cols=107 Identities=19% Similarity=0.279 Sum_probs=89.1
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCC
Q 028174 89 GYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDK 168 (212)
Q Consensus 89 ~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~ 168 (212)
+.+.++.++.|+++||++++++++....++......+....++.+|+.+.+.+++++++||+|+||||++++++..+ .
T Consensus 41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~--i 118 (274)
T PLN00183 41 DLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGH--F 118 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcC--C
Confidence 45678999999999999999999876654432211112225778999999999999999999999999999999743 6
Q ss_pred CCCcceehhhhhHHHHHHHHHHHHHHcch
Q 028174 169 AWDDHWIFWVGPFVGALAAAAYHQYILRA 197 (212)
Q Consensus 169 ~~~~~~vy~v~p~lGaila~ll~~~l~~~ 197 (212)
+|.+.|+||++|++|+++|+++++.+++.
T Consensus 119 ~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~ 147 (274)
T PLN00183 119 PWSKVPLYITAQTVGSVLATYVGVSVYGV 147 (274)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 89999999999999999999999988865
No 19
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.69 E-value=5.3e-17 Score=138.26 Aligned_cols=107 Identities=18% Similarity=0.191 Sum_probs=86.6
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCC
Q 028174 89 GYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDK 168 (212)
Q Consensus 89 ~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~ 168 (212)
..+.+|.+++|+++||+|++..++.................++.+|+.+.+.+++++++||+|+|||++++.++..+ .
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~--~ 115 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRR--F 115 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcC--C
Confidence 34567899999999999999998755432211111112234668999999999999999999999999999999754 7
Q ss_pred CCCcceehhhhhHHHHHHHHHHHHHHcch
Q 028174 169 AWDDHWIFWVGPFVGALAAAAYHQYILRA 197 (212)
Q Consensus 169 ~~~~~~vy~v~p~lGaila~ll~~~l~~~ 197 (212)
+|.+.|+||++|++|+++|+++.+.+++.
T Consensus 116 ~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~ 144 (283)
T PLN00182 116 PWYQVPLYIGAQLTGSLLASLTLRLMFNV 144 (283)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999888853
No 20
>PLN00166 aquaporin TIP2; Provisional
Probab=99.69 E-value=8.6e-17 Score=135.02 Aligned_cols=107 Identities=20% Similarity=0.296 Sum_probs=87.0
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhccCC--CC--CC-CCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHH
Q 028174 89 GYNKGSALGAEIIGTFVLVYTVFSATDPK--RS--AR-DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI 163 (212)
Q Consensus 89 ~~~~~~~~~~E~~~T~ilv~~v~~~~~~~--~~--~~-~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~ 163 (212)
+.+.+|+++.|+++|++|+++.++...+. .. .. +.......++.+|+.+++.+++++++||+|+||||++++.+.
T Consensus 14 ~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~ 93 (250)
T PLN00166 14 SVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIG 93 (250)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHh
Confidence 35667899999999999999999865431 11 10 111122467889999999999999999999999999999996
Q ss_pred hcCCCCCCcceehhhhhHHHHHHHHHHHHHHcch
Q 028174 164 YNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRA 197 (212)
Q Consensus 164 ~~~~~~~~~~~vy~v~p~lGaila~ll~~~l~~~ 197 (212)
. +.+|.+.|+||++|++|+++|+.+++.++.+
T Consensus 94 g--~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~ 125 (250)
T PLN00166 94 G--NITIITGFFYWIAQCLGSIVACLLLVFVTNG 125 (250)
T ss_pred C--CCCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3 4689999999999999999999999988754
No 21
>PLN00167 aquaporin TIP5; Provisional
Probab=99.69 E-value=1.2e-16 Score=134.51 Aligned_cols=107 Identities=21% Similarity=0.320 Sum_probs=88.5
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhccCCCC--C---CCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHH
Q 028174 89 GYNKGSALGAEIIGTFVLVYTVFSATDPKRS--A---RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI 163 (212)
Q Consensus 89 ~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~--~---~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~ 163 (212)
..+.++.+++||++|++|+++.++...+++. . .........++.+|+.+.+.+++++++||+|+|||+++++.+.
T Consensus 18 ~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~ 97 (256)
T PLN00167 18 TRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVG 97 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHh
Confidence 4557789999999999999999876653321 1 0111234578999999999999999999999999999999996
Q ss_pred hcCCCCCCcceehhhhhHHHHHHHHHHHHHHcch
Q 028174 164 YNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRA 197 (212)
Q Consensus 164 ~~~~~~~~~~~vy~v~p~lGaila~ll~~~l~~~ 197 (212)
. +.+|.+.|+||++|++|+++|+++++.+++.
T Consensus 98 g--~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 98 G--HISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred C--CCcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4 4789999999999999999999998888654
No 22
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.68 E-value=1.3e-16 Score=136.79 Aligned_cols=107 Identities=22% Similarity=0.284 Sum_probs=87.3
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCC
Q 028174 90 YNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKA 169 (212)
Q Consensus 90 ~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~ 169 (212)
.+.++.+++|+++|++|+++.++...+.............++.+|+++.+.+++.+++||+|+|||+++++.+..+ .+
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~--i~ 124 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGK--FP 124 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhcc--CC
Confidence 3456899999999999999988765443221111112346788999999999999999999999999999999754 78
Q ss_pred CCcceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 170 WDDHWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 170 ~~~~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
|.+.|.||++|++|+++|+++.+.++++.
T Consensus 125 ~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~ 153 (294)
T PTZ00016 125 WKKLPGYFVAQLLGAFVGAACVYGLYYGF 153 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999988888753
No 23
>PRK05420 aquaporin Z; Provisional
Probab=99.66 E-value=2.4e-16 Score=130.99 Aligned_cols=103 Identities=25% Similarity=0.192 Sum_probs=82.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccCCC-CCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCC
Q 028174 93 GSALGAEIIGTFVLVYTVFSATDPKR-SARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWD 171 (212)
Q Consensus 93 ~~~~~~E~~~T~ilv~~v~~~~~~~~-~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~ 171 (212)
+|.+++|+++|++|++..++.....+ ...........++.+|+.+.+.+++++++||+|+|||+++++.+.. +.+|.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~--~i~~~ 79 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGG--RFPAK 79 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhC--CCCHH
Confidence 57899999999999998886532211 1111111223578999999999999999999999999999999974 47899
Q ss_pred cceehhhhhHHHHHHHHHHHHHHcch
Q 028174 172 DHWIFWVGPFVGALAAAAYHQYILRA 197 (212)
Q Consensus 172 ~~~vy~v~p~lGaila~ll~~~l~~~ 197 (212)
+.|.||++|++|+++|+.+.+.++++
T Consensus 80 ~~~~Y~~aQ~lGa~~ga~l~~~~~~~ 105 (231)
T PRK05420 80 ELVPYIIAQVVGGIAAAAVLYLIASG 105 (231)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999877777654
No 24
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.66 E-value=2.7e-16 Score=130.53 Aligned_cols=106 Identities=25% Similarity=0.247 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCCCC-CCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCc
Q 028174 94 SALGAEIIGTFVLVYTVFSATDPKRSARD-SHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDD 172 (212)
Q Consensus 94 ~~~~~E~~~T~ilv~~v~~~~~~~~~~~~-~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~ 172 (212)
|.++.|+++|+++++..++...+++...+ .......++.+|+.+.+.+++++++||+|+|||+++++.+.. +.+|.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~--~~~~~~ 78 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGG--RFPLIR 78 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhC--CCCHHH
Confidence 45789999999999999986654332211 111235688999999999999999999999999999999975 378999
Q ss_pred ceehhhhhHHHHHHHHHHHHHHcchhhhh
Q 028174 173 HWIFWVGPFVGALAAAAYHQYILRAAAIK 201 (212)
Q Consensus 173 ~~vy~v~p~lGaila~ll~~~l~~~~~~~ 201 (212)
.|+||++|++|+++|+++++.+++++..+
T Consensus 79 ~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~ 107 (228)
T cd00333 79 VIPYIIAQLLGAILGAALLYGLYYGLYLE 107 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 99999999999999999999988765443
No 25
>PLN00027 aquaporin TIP; Provisional
Probab=99.64 E-value=6.4e-16 Score=129.99 Aligned_cols=106 Identities=23% Similarity=0.313 Sum_probs=84.6
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhccC--C--CCCCC-CCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHh
Q 028174 90 YNKGSALGAEIIGTFVLVYTVFSATDP--K--RSARD-SHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY 164 (212)
Q Consensus 90 ~~~~~~~~~E~~~T~ilv~~v~~~~~~--~--~~~~~-~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~ 164 (212)
...+|.++.|+++|++|++++++.... + ...++ .......++.+|+.+.+.+++.+++||+|+||||++++.+..
T Consensus 17 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g 96 (252)
T PLN00027 17 PDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGG 96 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhC
Confidence 346789999999999999998865311 1 11000 111224689999999999999999999999999999999853
Q ss_pred cCCCCCCcceehhhhhHHHHHHHHHHHHHHcch
Q 028174 165 NNDKAWDDHWIFWVGPFVGALAAAAYHQYILRA 197 (212)
Q Consensus 165 ~~~~~~~~~~vy~v~p~lGaila~ll~~~l~~~ 197 (212)
+.+|.+.|+||++|++|+++|+++++++.+.
T Consensus 97 --~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 127 (252)
T PLN00027 97 --NITLLRGILYWIAQLLGSVVACLLLKFSTGG 127 (252)
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999887654
No 26
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.62 E-value=6.2e-16 Score=130.01 Aligned_cols=112 Identities=25% Similarity=0.272 Sum_probs=91.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC-CCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCC
Q 028174 91 NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHV-PVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKA 169 (212)
Q Consensus 91 ~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~-~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~ 169 (212)
...|.+++||++|++|++..+++..+........+ -.-..+.+|++++..+++.+.+||+|+|||++++..++.+ .+
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~--~p 107 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR--LP 107 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC--CC
Confidence 46788999999999999988876655443322211 2345789999999999999999999999999999999865 89
Q ss_pred CCcceehhhhhHHHHHHHHHHHHHHcchhhhhhcC
Q 028174 170 WDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALG 204 (212)
Q Consensus 170 ~~~~~vy~v~p~lGaila~ll~~~l~~~~~~~~~~ 204 (212)
|.++.+|.++|++||++|+.....++.+.-.+..+
T Consensus 108 ~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~G 142 (316)
T KOG0224|consen 108 WKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDG 142 (316)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999998777777766555443
No 27
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.60 E-value=2.1e-15 Score=125.12 Aligned_cols=109 Identities=24% Similarity=0.226 Sum_probs=91.4
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCC
Q 028174 88 SGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNND 167 (212)
Q Consensus 88 ~~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~ 167 (212)
...+.+|.++.||++|+++++..+.............+....++..|+.+++.+++.+++||+|+|||++++..+..+
T Consensus 6 ~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~-- 83 (238)
T KOG0223|consen 6 LSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGK-- 83 (238)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCC--
Confidence 345788999999999999999998755433322222224457899999999999999999999999999999999654
Q ss_pred CCCCcceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 168 KAWDDHWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 168 ~~~~~~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
.++.+...||++|++|+++|+.+.+.+.+.+
T Consensus 84 isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~ 114 (238)
T KOG0223|consen 84 ISLFRAVAYIVAQLLGAIAGAALLKVVTPGQ 114 (238)
T ss_pred CcHHHhHHHHHHHHHHHHHHHHHHheecCcc
Confidence 8899999999999999999999999998874
No 28
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.59 E-value=3.8e-15 Score=123.44 Aligned_cols=110 Identities=25% Similarity=0.273 Sum_probs=87.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccC---CCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCC
Q 028174 91 NKGSALGAEIIGTFVLVYTVFSATDP---KRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNND 167 (212)
Q Consensus 91 ~~~~~~~~E~~~T~ilv~~v~~~~~~---~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~ 167 (212)
+..+.++.||++|++|++...++... +..+..........+.+|+.+.+.+++.+++||+|+|||++++.++..+
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~-- 80 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGR-- 80 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCC--
Confidence 44567899999999999977643221 1111111123457899999999999999999999999999999999654
Q ss_pred CCCCcceehhhhhHHHHHHHHHHHHHHcchhhhhh
Q 028174 168 KAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 202 (212)
Q Consensus 168 ~~~~~~~vy~v~p~lGaila~ll~~~l~~~~~~~~ 202 (212)
.+|++...||++|++|+++|+.+...++.++..+.
T Consensus 81 fp~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~ 115 (241)
T COG0580 81 FPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILET 115 (241)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhh
Confidence 89999999999999999999988888887654443
No 29
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.57 E-value=4.5e-15 Score=122.25 Aligned_cols=99 Identities=22% Similarity=0.227 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCC---CCCC--CCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCc
Q 028174 98 AEIIGTFVLVYTVFSATDPKRSA---RDSH--VPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDD 172 (212)
Q Consensus 98 ~E~~~T~ilv~~v~~~~~~~~~~---~~~~--~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~ 172 (212)
+|+++|++|+++.++...+.+.. +... .....++.+|+.+...+++.+++||+|+|||+++++.+..+ .+|.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~--~~~~~ 78 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRR--FPLKR 78 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCC--CCHHH
Confidence 49999999999998765431111 1110 12356889999999999999999999999999999999754 78999
Q ss_pred ceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 173 HWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 173 ~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
.|+||++|++|+++++++++.+++++
T Consensus 79 ~~~y~~aQ~~Ga~~~~~~~~~~~~~~ 104 (216)
T TIGR00861 79 VPVYIVAQLIGAILGAALLYGLTSGL 104 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 99999999999999999999888764
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.50 E-value=1.7e-14 Score=119.36 Aligned_cols=107 Identities=23% Similarity=0.305 Sum_probs=84.2
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhc---cCCCCC-CCCC--CCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHH
Q 028174 90 YNKGSALGAEIIGTFVLVYTVFSAT---DPKRSA-RDSH--VPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI 163 (212)
Q Consensus 90 ~~~~~~~~~E~~~T~ilv~~v~~~~---~~~~~~-~~~~--~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~ 163 (212)
.+.+|.+++|+++|+++++...+.. .+.... ..+. .....++.+|+.+.+.+++++++||+|+|||+|++..+.
T Consensus 5 ~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~ 84 (227)
T PF00230_consen 5 PSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALT 84 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeee
Confidence 4578999999999999999877532 121111 1000 122356678999999999999999999999999999996
Q ss_pred hcCCCCCCcceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 164 YNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 164 ~~~~~~~~~~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
. +.+|.+...|+++|++|+++|+.+.+.++++.
T Consensus 85 g--~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~ 117 (227)
T PF00230_consen 85 G--RISWKKAIVYIIAQFLGAFLGALLVYALYPDS 117 (227)
T ss_dssp T--SSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHH
T ss_pred e--eecccceeeEEeeccccccccccchhhcccCc
Confidence 5 48899999999999999999999999998875
No 31
>PRK11562 nitrite transporter NirC; Provisional
Probab=83.82 E-value=26 Score=29.85 Aligned_cols=161 Identities=9% Similarity=0.029 Sum_probs=79.2
Q ss_pred HHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhh---hhhcCCCc----cccCCCCchhhHHHHHHHHHHHHHHHHH
Q 028174 39 LFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHE---YNSLGGGA----NTVASGYNKGSALGAEIIGTFVLVYTVF 111 (212)
Q Consensus 39 ~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~E~~~T~ilv~~v~ 111 (212)
-.+.||.++++.+-.+.-=.+|=++|+.+...+.... ........ .....+.+.++.|+-=.++-++..+.++
T Consensus 90 ~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~~~~~ia~~K~~~~~~~~f~~gI~CNwLVclavw 169 (268)
T PRK11562 90 GVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIW 169 (268)
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 3445778888888777766777777776664443221 11000000 0011234567777777777777777776
Q ss_pred HhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcC--CCCCCc----ceehhhhhHHHH-
Q 028174 112 SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNN--DKAWDD----HWIFWVGPFVGA- 184 (212)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~--~~~~~~----~~vy~v~p~lGa- 184 (212)
.....+ . . ... +.+-+.+++.+. ....=...|-- -+...++... ...|.. ...=.+|.++|+
T Consensus 170 ~~~~~~-~-~----gKi--~~i~~pI~~Fv~--~GFEH~IANm~-~~~l~~~~~~~~~~~~~~~~~nlipvtLGNivGG~ 238 (268)
T PRK11562 170 MAIRTE-G-A----AKF--IAIWWCLLAFIA--SGYEHSVANMT-LFALSWFGHHSEAYTLAGIGHNLLWVTLGNTLSGA 238 (268)
T ss_pred HHHhcc-c-c----chh--HHHHHHHHHHHH--cCCcchhHhHH-HHHHHHHccCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 543321 1 1 112 222233332222 22222344522 2322332211 112211 122337888888
Q ss_pred HHHHHHHHHHcchhhhhhcCCCCCCC
Q 028174 185 LAAAAYHQYILRAAAIKALGSFRSNP 210 (212)
Q Consensus 185 ila~ll~~~l~~~~~~~~~~~~~~~~ 210 (212)
++-++.|.+.++++.+++..++++.+
T Consensus 239 v~vg~~y~~~~~~~~~~~~~~~~~~~ 264 (268)
T PRK11562 239 VFMGLGYWYATPKANRPVAAKFNQTE 264 (268)
T ss_pred HHHHHHHHHHhCCCcCchhhhHhhhh
Confidence 45677888888776655555555443
No 32
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=72.76 E-value=59 Score=27.71 Aligned_cols=154 Identities=16% Similarity=0.142 Sum_probs=80.0
Q ss_pred HHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhh-hhcCCCccc--------cCCCCchhhHHHHHHHHHHHHH
Q 028174 37 FGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEY-NSLGGGANT--------VASGYNKGSALGAEIIGTFVLV 107 (212)
Q Consensus 37 la~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~E~~~T~ilv 107 (212)
-.-...++++|++.+--++-=.+|=++|+.++..++.-.- ...+++... -.-+.+..+.|.--.++-++..
T Consensus 94 t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVc 173 (265)
T COG2116 94 TVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANGQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVC 173 (265)
T ss_pred HHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccchhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 3344568899999998888888888888888766662110 011111110 0123345566666666666666
Q ss_pred HHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCc-ceehh----hhhHH
Q 028174 108 YTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDD-HWIFW----VGPFV 182 (212)
Q Consensus 108 ~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~-~~vy~----v~p~l 182 (212)
+.++..-.-|... ..-+.+-+.++ .++.++..=...|-..-. ......+..+|.+ .+--+ +|.++
T Consensus 174 lAvwm~~~~k~~~-------~K~~~m~~pv~--~Fv~~GfeH~VANm~~i~-~~~~~~~~~~~~~fi~~Nlipv~lGNiv 243 (265)
T COG2116 174 LAVWMSYSAKDGA-------AKIFAIILPVM--LFVASGFEHSVANMFMIP-WAAVFSGALTWADFILKNLIPVTLGNIV 243 (265)
T ss_pred HHHHHHhcccchh-------hHHHHHHHHHH--HHHHcCCceeeehHHHHH-HHHHcCChhhhHHHHHHHHHHHHHhchh
Confidence 6665443322211 12233333333 333444444456643322 2333333455655 33222 46666
Q ss_pred HHHH-HHHHHHHHcchhhh
Q 028174 183 GALA-AAAYHQYILRAAAI 200 (212)
Q Consensus 183 Gail-a~ll~~~l~~~~~~ 200 (212)
|+.+ -++.|+++++++.+
T Consensus 244 GG~v~vgl~Y~~~~~~~~~ 262 (265)
T COG2116 244 GGAVFVGLMYWYLYRKQNR 262 (265)
T ss_pred cchhhhhHHHHHhcccccc
Confidence 5544 57788888876544
No 33
>PRK10805 formate transporter; Provisional
Probab=62.82 E-value=1e+02 Score=26.56 Aligned_cols=82 Identities=11% Similarity=0.112 Sum_probs=44.3
Q ss_pred chHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhh--hhhcCCC-------ccccCCCCchhhHHHHHHHH
Q 028174 32 NPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHE--YNSLGGG-------ANTVASGYNKGSALGAEIIG 102 (212)
Q Consensus 32 NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~~~~~~-------~~~~~~~~~~~~~~~~E~~~ 102 (212)
|-..++ ..+.||.++++.+-.+.-=.+|=++|+.++-.+.... .....+. ......+.+.++.|+-=.++
T Consensus 93 n~l~~~-~~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gI~C 171 (285)
T PRK10805 93 TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILA 171 (285)
T ss_pred hHHHHH-HHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 444443 3567899999988666555556666665543332111 1000000 00011235677777777778
Q ss_pred HHHHHHHHHHhc
Q 028174 103 TFVLVYTVFSAT 114 (212)
Q Consensus 103 T~ilv~~v~~~~ 114 (212)
-++..+.++...
T Consensus 172 N~lVclaV~~~~ 183 (285)
T PRK10805 172 NLMVCLAVWMSY 183 (285)
T ss_pred HHHHHHHHHHHH
Confidence 888777776433
No 34
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=60.88 E-value=3.3 Score=30.60 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=16.6
Q ss_pred ccccccchHHHHHHHHhcC
Q 028174 26 VVGGHINPAVTFGLFLARK 44 (212)
Q Consensus 26 iSGaH~NPaVTla~~~~g~ 44 (212)
=|+||+||.+.++..+..+
T Consensus 7 Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 7 GTRGHVYPFLALARALRRR 25 (139)
T ss_dssp SSHHHHHHHHHHHHHHHHT
T ss_pred CChhHHHHHHHHHHHHhcc
Confidence 4789999999999999854
No 35
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=58.73 E-value=1.6e+02 Score=27.72 Aligned_cols=44 Identities=18% Similarity=0.168 Sum_probs=34.2
Q ss_pred chHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhh
Q 028174 32 NPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHE 75 (212)
Q Consensus 32 NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~ 75 (212)
-.+|+.+++..-..|......++.+.++|+.+|....+.+.+..
T Consensus 371 ~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~ 414 (650)
T PF04632_consen 371 MAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHL 414 (650)
T ss_pred HHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 34444444555667889999999999999999999998887763
No 36
>COG0730 Predicted permeases [General function prediction only]
Probab=49.89 E-value=1.5e+02 Score=24.52 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=26.0
Q ss_pred HHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHh
Q 028174 40 FLARKVSLIRAVAYMVAQCLGAICGVGLVKAFM 72 (212)
Q Consensus 40 ~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~ 72 (212)
+-.++.+|+....+...=++|+.+|+.+...+.
T Consensus 66 ~k~~~v~~~~~~~l~~~~~~G~~lG~~l~~~~~ 98 (258)
T COG0730 66 LKRGNVDWKLALILLLGALIGAFLGALLALLLP 98 (258)
T ss_pred HHcCCccHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 334678999999999999999999976655443
No 37
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=43.15 E-value=11 Score=33.10 Aligned_cols=18 Identities=22% Similarity=0.471 Sum_probs=16.0
Q ss_pred ccccccchHHHHHHHHhc
Q 028174 26 VVGGHINPAVTFGLFLAR 43 (212)
Q Consensus 26 iSGaH~NPaVTla~~~~g 43 (212)
=+|||+.||+.++..+..
T Consensus 10 GTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 10 GSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred CcHHHHHHHHHHHHHHHh
Confidence 478999999999999874
No 38
>PF14990 DUF4516: Domain of unknown function (DUF4516)
Probab=42.52 E-value=60 Score=20.10 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=30.8
Q ss_pred cCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhh
Q 028174 43 RKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYN 77 (212)
Q Consensus 43 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~ 77 (212)
++.+|.+-+....+-++--++|+-+++.+|+++++
T Consensus 3 ~Gv~~~~yl~~~~~s~~sM~aGA~vVH~~ykPdlt 37 (47)
T PF14990_consen 3 AGVSWPSYLKSLVASLLSMLAGASVVHNIYKPDLT 37 (47)
T ss_pred CCCcHHHHHHHHHHHHHHHHhhhHHHHHHhCccCC
Confidence 45789999999999999999999999999988754
No 39
>PRK11427 multidrug efflux system protein MdtO; Provisional
Probab=42.15 E-value=3.4e+02 Score=26.51 Aligned_cols=29 Identities=21% Similarity=0.118 Sum_probs=23.9
Q ss_pred chhHHHHHHHHHhHHHHHHHHHHHHHhhh
Q 028174 46 SLIRAVAYMVAQCLGAICGVGLVKAFMKH 74 (212)
Q Consensus 46 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~ 74 (212)
...|....++++++|+++|..+...+.++
T Consensus 394 T~sRa~~RiiGTliGallA~ll~v~l~P~ 422 (683)
T PRK11427 394 SYQKMVLRFGGAFCGAILALLFTLLVMPW 422 (683)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 45688889999999999999988777653
No 40
>COG3301 NrfD Formate-dependent nitrite reductase, membrane component [Inorganic ion transport and metabolism]
Probab=39.43 E-value=2.3e+02 Score=24.56 Aligned_cols=25 Identities=20% Similarity=0.204 Sum_probs=15.5
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHH
Q 028174 47 LIRAVAYMVAQCLGAICGVGLVKAF 71 (212)
Q Consensus 47 ~~~~~~yi~aQ~~Ga~~g~~~~~~~ 71 (212)
+.+.+..+.+=.+|+..|..+.+..
T Consensus 133 ~~~iL~~i~gi~~~aYTGflLaa~~ 157 (305)
T COG3301 133 ALEILMAILGVLLGAYTGFLLAALK 157 (305)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4556666666667777666665443
No 41
>PF09622 DUF2391: Putative integral membrane protein (DUF2391); InterPro: IPR024464 Members of this protein family are found in archaea and bacteria. Their function is unknown.
Probab=38.95 E-value=77 Score=27.07 Aligned_cols=73 Identities=18% Similarity=0.209 Sum_probs=43.0
Q ss_pred HHHHHHhcCC----chhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHHHHHHHHHHHH
Q 028174 36 TFGLFLARKV----SLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVY 108 (212)
Q Consensus 36 Tla~~~~g~~----~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~ilv~ 108 (212)
++-+++.|++ ++.+.+..++-|..=+-+|+.+.....+++.+..+.......+....+..+..|++|.+++-+
T Consensus 80 ~~~L~~l~~l~~~~~~~e~lgkiiv~~vP~siGa~la~~~L~~~~~~~~~~~~~~~~~~~~~~Dl~q~~vGA~~lA~ 156 (267)
T PF09622_consen 80 AAVLTLLGKLTLDTPPREALGKIIVQSVPASIGAALARSQLGGDSDEEEEEEEEDKPERGYLADLGQMIVGALFLAF 156 (267)
T ss_pred HHHHHHHhhCCCCCCHHHHhHhheeeEecHHHHHHHHHHHcCCCCCcccccccccccccccHHHHHHHHHHHHHHhc
Confidence 3344445654 688899999999999999999998888654222111111112233344455555555555443
No 42
>PRK14218 camphor resistance protein CrcB; Provisional
Probab=35.54 E-value=1.9e+02 Score=21.78 Aligned_cols=120 Identities=18% Similarity=0.115 Sum_probs=62.1
Q ss_pred chhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 028174 46 SLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHV 125 (212)
Q Consensus 46 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~ 125 (212)
-|++...++ .+|+.+|+.+-|.+-....+..+ +. -.+..++.-.+++|++-+..-... ++...+
T Consensus 5 ~~~~~~l~V---~~GG~~Ga~lRy~l~~~~~~~~~-------~~-fP~gTl~VNv~GsfllG~l~~~~~-~~~~~~---- 68 (133)
T PRK14218 5 VWWQSLLLV---MLGGAFGSGLRFVIGSCLLQRFG-------AG-FPWGTLAVNLIGSFVAGFLLIWLD-KRGSAG---- 68 (133)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcC-------CC-CcHHHHHHHHHHHHHHHHHHHHHH-hccCCC----
Confidence 355555544 38999999988877533211110 11 235578999999999977543322 211110
Q ss_pred CCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhc-CCCCCCcceehhhhhHHHHHHHHHHHHH
Q 028174 126 PVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN-NDKAWDDHWIFWVGPFVGALAAAAYHQY 193 (212)
Q Consensus 126 ~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~-~~~~~~~~~vy~v~p~lGaila~ll~~~ 193 (212)
.++...+... ++ |..|- + -++......- .+.+|.....|++..++++++++.+=..
T Consensus 69 ---~~~~~~l~tG---fl-GgfTT--F---STf~~E~~~L~~~~~~~~a~~y~~~s~~~gl~a~~lG~~ 125 (133)
T PRK14218 69 ---WPWRMLLIVG---LI-GGLTT--F---SSLMMECLVFVRSDRSLMVGIYLCITLLFGLLFVFLGAR 125 (133)
T ss_pred ---HHHHHHHHHH---Hh-chhcc--H---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122222221 22 22220 0 1233222211 1235555668999999999998766443
No 43
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=33.16 E-value=2.8e+02 Score=22.96 Aligned_cols=74 Identities=16% Similarity=0.117 Sum_probs=44.4
Q ss_pred HHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCC---------ccccCCCCchhhHHHHHHHHHHHHHHH
Q 028174 39 LFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGG---------ANTVASGYNKGSALGAEIIGTFVLVYT 109 (212)
Q Consensus 39 ~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~E~~~T~ilv~~ 109 (212)
-++.||.+|.+.+-.+.-=.+|=++|+.+.-.+........... ......+.+.++.++--+++.++..+.
T Consensus 75 ~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gilcn~lV~la 154 (239)
T TIGR00790 75 ALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGILCNWLVCLA 154 (239)
T ss_pred HHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHH
Confidence 35678899999888877777777777766655443211100000 001122456777777777777877777
Q ss_pred HHH
Q 028174 110 VFS 112 (212)
Q Consensus 110 v~~ 112 (212)
+..
T Consensus 155 v~~ 157 (239)
T TIGR00790 155 VWM 157 (239)
T ss_pred HHH
Confidence 664
No 44
>PF02537 CRCB: CrcB-like protein; InterPro: IPR003691 Three genes, crcA, cspE and crcB when present in high copy confer camphor resistance on a cell and suppress mutations in the chromosomal partition gene mukB in Escherichia coli. The cspE gene has been previously identified as a cold shock-like protein with homologues in all organisms tested []. Camphor and mukB mutations may interfere with chromosome condensation and high copy crcA, cspE and crcB have been implicated as promoting or protecting chromosome folding [].; GO: 0016020 membrane
Probab=32.83 E-value=1.9e+02 Score=20.82 Aligned_cols=109 Identities=17% Similarity=0.098 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHH
Q 028174 58 CLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAV 137 (212)
Q Consensus 58 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v 137 (212)
.+|+.+|+.+-|.+....... .+...+..+..-.++++++-+..-....+.... ....+..++..
T Consensus 5 ~lgg~~Ga~~R~~l~~~~~~~---------~~~~p~gt~~vN~~g~fllG~~~~~~~~~~~~~------~~~~~~~~l~~ 69 (117)
T PF02537_consen 5 ALGGALGALLRYGLSKLLNRR---------WGWFPWGTLLVNVLGCFLLGLLAGLLAKKLASK------WSPSLRLFLGT 69 (117)
T ss_pred HHHHHHHHHHHHHHHHHhccc---------cCCCchHHHHHHHHHHHHHHHHHHHHHHhcccc------CCHHHHHHHHH
Confidence 578999998888775432111 111156678999999999987654332211111 11223333333
Q ss_pred HHHHHHhhCCCCCCCcchhhHHHHHHhc-CCCCCCcceehhhhhHHHHHHHHHH
Q 028174 138 FMVHLATIPITGTGINPARSFGAAVIYN-NDKAWDDHWIFWVGPFVGALAAAAY 190 (212)
Q Consensus 138 ~~~~~~~~~~sG~~lNPA~~lg~~l~~~-~~~~~~~~~vy~v~p~lGaila~ll 190 (212)
..+ |..|- + -++....... .+.+|.+...|.+..+.++++++.+
T Consensus 70 Gf~----G~lTT--f---St~~~e~~~l~~~~~~~~~~~y~~~s~~~g~~~~~~ 114 (117)
T PF02537_consen 70 GFC----GGLTT--F---STFILETFQLFESGRWFRALLYVLVSVILGLLAAWL 114 (117)
T ss_pred HHc----chHHH--H---HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 322 11110 0 0111111111 1235667788999999999888764
No 45
>PRK09713 focB putative formate transporter; Provisional
Probab=31.56 E-value=3.4e+02 Score=23.32 Aligned_cols=75 Identities=5% Similarity=0.009 Sum_probs=41.2
Q ss_pred HHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhh-hhhcCCCc--------cccCCCCchhhHHHHHHHHHHHHHHHH
Q 028174 40 FLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHE-YNSLGGGA--------NTVASGYNKGSALGAEIIGTFVLVYTV 110 (212)
Q Consensus 40 ~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~E~~~T~ilv~~v 110 (212)
...|+.+|++.+-.+.-=.+|=++|+.+.-.+.... ....+... .....+.+.++.|+--.++-++..+.+
T Consensus 99 ~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~~~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV 178 (282)
T PRK09713 99 KSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLAL 178 (282)
T ss_pred HHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 457888998888655544555555554443332211 00000000 001134567788888888888888877
Q ss_pred HHhc
Q 028174 111 FSAT 114 (212)
Q Consensus 111 ~~~~ 114 (212)
+...
T Consensus 179 ~~~~ 182 (282)
T PRK09713 179 WMSY 182 (282)
T ss_pred HHHh
Confidence 7543
No 46
>PRK14217 camphor resistance protein CrcB; Provisional
Probab=30.60 E-value=2.4e+02 Score=21.32 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHH
Q 028174 58 CLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAV 137 (212)
Q Consensus 58 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v 137 (212)
.+|+.+|+.+-|.+-....+.. ... -.+..++.-.+++|++-+..-.... +...+ + .+...+..
T Consensus 10 ~iGG~lGa~~Ry~l~~~~~~~~-------~~~-fP~gTl~VNi~GsfllG~~~~~~~~-~~~~~----~---~~~~~l~t 73 (134)
T PRK14217 10 AIGGSLGAMSRYLVTIMAQNAW-------GIK-FPYGTLLVNTLGSFLAGFFLIVLVG-RFSAE----E---SFRLFLFT 73 (134)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-------CCC-CcHHHHHHHHHHHHHHHHHHHHHHh-ccCCC----H---HHHHHHHH
Confidence 3899999998777643321111 011 2355788999999999776533222 11111 1 12222222
Q ss_pred HHHHHHhhCCCCCCCcchhhHHHHHHhc-CCCCCCcceehhhhhHHHHHHHHHHHHHH
Q 028174 138 FMVHLATIPITGTGINPARSFGAAVIYN-NDKAWDDHWIFWVGPFVGALAAAAYHQYI 194 (212)
Q Consensus 138 ~~~~~~~~~~sG~~lNPA~~lg~~l~~~-~~~~~~~~~vy~v~p~lGaila~ll~~~l 194 (212)
. ++ |..|- + -++......- .+.+|.....|++..++++++++++=..+
T Consensus 74 G---fl-GgfTT--F---STf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 122 (134)
T PRK14217 74 G---FL-GAFTT--F---SSFAAESLFMFEQGYWFKLITNILVNNVGSLSMVFIGTLV 122 (134)
T ss_pred H---Hh-chhcc--H---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 22 22220 0 0233222211 12455567789999999999987765444
No 47
>PRK14212 camphor resistance protein CrcB; Provisional
Probab=27.16 E-value=2.7e+02 Score=20.80 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHH
Q 028174 58 CLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAV 137 (212)
Q Consensus 58 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v 137 (212)
.+|+.+|+..-|.+-....+.. .+.+ .+..++.-.+++|++-+......+ +...+ ..+...+..
T Consensus 8 ~~Gg~~Ga~~Ry~l~~~~~~~~-------~~~f-P~~Tl~vN~~GsfllG~~~~~~~~-~~~~~-------~~~~~~l~t 71 (128)
T PRK14212 8 AAGGALGAVSRYGLNNLTVKLL-------GDSF-PYGTLIVNCLGCFVLGFLMQWGFS-SDSHN-------THLKLMLTA 71 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-------cCCC-chHHHHHHHHHHHHHHHHHHHHHh-ccCCC-------HHHHHHHHh
Confidence 4899999998887753221111 0112 345688999999999765433222 11110 112222222
Q ss_pred HHHHHHhhCCCCCCCcchhhHHHHHHhc-CCCCCCcceehhhhhHHHHHHHHHHHHHH
Q 028174 138 FMVHLATIPITGTGINPARSFGAAVIYN-NDKAWDDHWIFWVGPFVGALAAAAYHQYI 194 (212)
Q Consensus 138 ~~~~~~~~~~sG~~lNPA~~lg~~l~~~-~~~~~~~~~vy~v~p~lGaila~ll~~~l 194 (212)
. + +|..|- + -++......- .+.+|.....|++..++++++++.+=..+
T Consensus 72 G---f-lGgfTT--F---STf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 120 (128)
T PRK14212 72 G---F-LGAFTT--F---STFSYETLDCFKAGDYFNGFSNILANVLLGLLMVFIGAYL 120 (128)
T ss_pred h---H-hcCccc--H---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2 233330 0 0222222211 12456667789999999999987664433
No 48
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=26.53 E-value=41 Score=24.37 Aligned_cols=49 Identities=12% Similarity=0.209 Sum_probs=38.4
Q ss_pred CCCCcchhhHHHHHHhcCCCCCCcceehhhhhHHHHHHHHHHHHHHcch
Q 028174 149 GTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRA 197 (212)
Q Consensus 149 G~~lNPA~~lg~~l~~~~~~~~~~~~vy~v~p~lGaila~ll~~~l~~~ 197 (212)
|+.+.|-|.+-.-++.+...+--+..+|+++-++|+=.|..+.+++...
T Consensus 53 GGTfd~~~~iE~g~~~G~~~~~~KQ~l~Il~Af~GA~~g~~lI~wl~~~ 101 (102)
T PF14034_consen 53 GGTFDTFRSIEKGFFEGELSDIIKQLLYILSAFLGAHTGYILIRWLTGG 101 (102)
T ss_pred hcCchHHHHHHhHhcCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHHcC
Confidence 4678899998888876532333467889999999999999999987653
No 49
>PRK14198 camphor resistance protein CrcB; Provisional
Probab=24.92 E-value=2.9e+02 Score=20.47 Aligned_cols=110 Identities=13% Similarity=0.026 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHH
Q 028174 58 CLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAV 137 (212)
Q Consensus 58 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v 137 (212)
.+|+.+|+..-|.+.... ++.. .+++ .+..++.-.+++|++-+..-.... +...+ + .+...+..
T Consensus 7 ~~GG~lGa~~Ry~l~~~~-~~~~------~~~f-P~~Tl~vN~~GsfllG~l~~~~~~-~~~~~----~---~~~~~l~t 70 (124)
T PRK14198 7 FVGGGLGASLRHAVNMAS-ARLL------GTSF-PYGTFIINVSGSLVMGLIAGYLAF-KGGAP----Q---HWRLFLMT 70 (124)
T ss_pred HHHHHHHHHHHHHHHHHH-HHhc------CCCC-cHHHHHHHHHHHHHHHHHHHHHHh-ccCCC----H---HHHHHHHH
Confidence 489999999888774321 1100 0112 345788999999999876533222 11111 1 12222222
Q ss_pred HHHHHHhhCCCCCCCcchhhHHHHHHhc-CCCCCCcceehhhhhHHHHHHHHHHHH
Q 028174 138 FMVHLATIPITGTGINPARSFGAAVIYN-NDKAWDDHWIFWVGPFVGALAAAAYHQ 192 (212)
Q Consensus 138 ~~~~~~~~~~sG~~lNPA~~lg~~l~~~-~~~~~~~~~vy~v~p~lGaila~ll~~ 192 (212)
. ++ |..|- + -++......- .+.+|.....|++..++++++++++=.
T Consensus 71 G---fl-GgfTT--F---STf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~ 117 (124)
T PRK14198 71 G---IL-GGYTT--F---SAFSLDAALLYERGALGLAALYVLGSVALGIAGLFAGL 117 (124)
T ss_pred H---Hh-ccccc--H---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 22 22330 0 0222222211 124566677899999999999887643
No 50
>PRK09979 putative rho operon leader peptide; Provisional
Probab=23.45 E-value=24 Score=19.34 Aligned_cols=15 Identities=27% Similarity=0.594 Sum_probs=11.7
Q ss_pred cccccccchHHHHHH
Q 028174 25 FVVGGHINPAVTFGL 39 (212)
Q Consensus 25 ~iSGaH~NPaVTla~ 39 (212)
.|||..+||..-++-
T Consensus 5 qisgsslnpscrfss 19 (33)
T PRK09979 5 QISGSSLNPSCRFSS 19 (33)
T ss_pred cccCCcCCccccccc
Confidence 489999999876543
No 51
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=23.44 E-value=4.2e+02 Score=22.59 Aligned_cols=62 Identities=19% Similarity=0.504 Sum_probs=33.2
Q ss_pred CchhHHHHHHHHHHHHHhhC-CCCCCCcchhhHHHHHHhcCCCCCCc---ce-ehhhhhHHHHHHHHHHHHH
Q 028174 127 VLAPLPIGFAVFMVHLATIP-ITGTGINPARSFGAAVIYNNDKAWDD---HW-IFWVGPFVGALAAAAYHQY 193 (212)
Q Consensus 127 ~~~~~~ig~~v~~~~~~~~~-~sG~~lNPA~~lg~~l~~~~~~~~~~---~~-vy~v~p~lGaila~ll~~~ 193 (212)
...++..++.+...+++.+. .||-.+ .+..... .+.+.|++ .| +-+++.++|+++.++++++
T Consensus 65 lvg~~~F~~GLilVv~~g~ELfT~n~m----~~t~~~~-~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~ 131 (265)
T COG2116 65 LVGGLVFSLGLILVVIAGSELFTSNTM----LLTVGVL-SKKISWGQLLRNWLVVYLGNLIGALFVALLFHL 131 (265)
T ss_pred HHHHHHHHHHHHHhhhhCccccccchh----HHHHHHH-hCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555554442 232222 1222222 23466664 34 3457999999999888833
No 52
>PRK14202 camphor resistance protein CrcB; Provisional
Probab=23.27 E-value=3.2e+02 Score=20.35 Aligned_cols=111 Identities=13% Similarity=0.123 Sum_probs=58.3
Q ss_pred HHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHH
Q 028174 56 AQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGF 135 (212)
Q Consensus 56 aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~ 135 (212)
.=.+|+.+|+..-|.+-... +.. .++. .+..+..-.+++|++-+..-.... +...+ + .+...+
T Consensus 10 ~V~~Gg~~Ga~~Ry~l~~~~-~~~-------~~~f-P~gTl~vNi~GsfllG~~~~~~~~-~~~~~----~---~~~~~l 72 (128)
T PRK14202 10 LVGAGGFLGSVARYLVALAL-SFI-------GTGF-PFATFTVNLLGSFLIGFISELALS-TTLVS----P---EARLLL 72 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHH-Hhc-------cCCC-cHHHHHHHHHHHHHHHHHHHHHHh-cCCCC----H---HHHHHH
Confidence 34588999999887765332 111 0112 355788999999999765433221 11110 1 122222
Q ss_pred HHHHHHHHhhCCCCCCCcchhhHHHHHHhc-CCCCCCcceehhhhhHHHHHHHHHHHH
Q 028174 136 AVFMVHLATIPITGTGINPARSFGAAVIYN-NDKAWDDHWIFWVGPFVGALAAAAYHQ 192 (212)
Q Consensus 136 ~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~-~~~~~~~~~vy~v~p~lGaila~ll~~ 192 (212)
.. .++ |..|- + -++......- .+.+|.....|.+..++++++++.+=.
T Consensus 73 ~t---Gf~-GgfTT--F---STf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~ 121 (128)
T PRK14202 73 VT---GFC-GGFTT--F---SSYMYEIAALLRDGELFYASLYLAGSLVGGFVALYSGT 121 (128)
T ss_pred Hh---HHh-ccccc--H---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 122 33330 0 1333333211 124566677899999999999876543
No 53
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=22.47 E-value=2.2e+02 Score=22.86 Aligned_cols=47 Identities=15% Similarity=0.244 Sum_probs=0.0
Q ss_pred chHHHHHHHHhcCCchhHHHH---HHHHHhHHHHHHHHHHHHHhhhhhhh
Q 028174 32 NPAVTFGLFLARKVSLIRAVA---YMVAQCLGAICGVGLVKAFMKHEYNS 78 (212)
Q Consensus 32 NPaVTla~~~~g~~~~~~~~~---yi~aQ~~Ga~~g~~~~~~~~~~~~~~ 78 (212)
|-+-.+.+...|+.++..... .+.+.++|+.+|..+...+.++.++.
T Consensus 178 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~lG~~~~~~i~~~~~~~ 227 (240)
T PF01925_consen 178 SVAALISFLILGDVDWPMLLLSLILLPGAFLGAFLGAKLARKIPQKVFRR 227 (240)
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
No 54
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=22.25 E-value=2.4e+02 Score=20.42 Aligned_cols=46 Identities=20% Similarity=0.369 Sum_probs=33.1
Q ss_pred ccccchHHHHHHHH-hcCC-chhHHHHHHHHHhHHHHHHHHHHHHHhh
Q 028174 28 GGHINPAVTFGLFL-ARKV-SLIRAVAYMVAQCLGAICGVGLVKAFMK 73 (212)
Q Consensus 28 GaH~NPaVTla~~~-~g~~-~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 73 (212)
||-|.|-=.+-.=+ .|++ +..|=+.|+++-++||-.|..++.++.+
T Consensus 53 GGTfd~~~~iE~g~~~G~~~~~~KQ~l~Il~Af~GA~~g~~lI~wl~~ 100 (102)
T PF14034_consen 53 GGTFDTFRSIEKGFFEGELSDIIKQLLYILSAFLGAHTGYILIRWLTG 100 (102)
T ss_pred hcCchHHHHHHhHhcCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHHc
Confidence 45566555555433 3443 5678889999999999999999888754
No 55
>PRK14206 camphor resistance protein CrcB; Provisional
Probab=22.25 E-value=3.3e+02 Score=20.19 Aligned_cols=111 Identities=16% Similarity=0.030 Sum_probs=56.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHH
Q 028174 58 CLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAV 137 (212)
Q Consensus 58 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v 137 (212)
.+|+.+|+.+-|.+-.-..... .++. .+..+..-.+++|++-+........++... -.++...+..
T Consensus 7 ~~Gg~lGa~~Ry~l~~~~~~~~-------~~~f-p~gTl~vNi~GsfllG~~~~~~~~~~~~~~------~~~~~~~l~t 72 (127)
T PRK14206 7 ALGSALGGTLRFWLSGLVAEAT-------GGTF-PWGTLVINVSGSFLIGFFATLTGPEGRVFV------GESWRLFVMV 72 (127)
T ss_pred HHhHHHHHHHHHHHHHHHhhcc-------cCCC-chHHHHHHHHHHHHHHHHHHHHhhcccccC------CHHHHHHHHH
Confidence 4889999998877643211111 0112 345688999999999876533222111100 0112222222
Q ss_pred HHHHHHhhCCCCCCCcchhhHHHHHHhc-CCCCCCcceehhhhhHHHHHHHHHHH
Q 028174 138 FMVHLATIPITGTGINPARSFGAAVIYN-NDKAWDDHWIFWVGPFVGALAAAAYH 191 (212)
Q Consensus 138 ~~~~~~~~~~sG~~lNPA~~lg~~l~~~-~~~~~~~~~vy~v~p~lGaila~ll~ 191 (212)
. ++ |..|- + -++....+.- .+.+|.....|++..++++++++++=
T Consensus 73 G---f~-GgfTT--F---STf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~~G 118 (127)
T PRK14206 73 G---VC-GGFTT--F---SSFSLQTLNLARDGDWLRAGGNVVLSVVFCLLAVWLG 118 (127)
T ss_pred H---Hc-ccccc--H---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22 33330 0 1222222211 12456566789999999999987654
No 56
>PRK14208 camphor resistance protein CrcB; Provisional
Probab=21.31 E-value=3.5e+02 Score=20.10 Aligned_cols=110 Identities=18% Similarity=0.157 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHH
Q 028174 58 CLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAV 137 (212)
Q Consensus 58 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v 137 (212)
.+|+.+|+..-|.+... .++.. .++ -.+..++.-.+++|++-+........ ...+ + .+...+..
T Consensus 8 ~~GG~~Ga~~Ry~l~~~-~~~~~------~~~-fP~~Tl~vNi~GsfllG~~~~~~~~~-~~~~----~---~~~~~l~t 71 (126)
T PRK14208 8 CLGGALGSGARYLTSAW-ALRAF------GPD-FPRGTLLVNVSGSFLLAGIMTASLQS-EAVP----P---DLRLFLAA 71 (126)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhc------CCC-CcHHHHHHHHHHHHHHHHHHHHHHhc-cCCC----H---HHHHHHHH
Confidence 48999999988877432 11110 011 23457889999999987765433221 1110 1 12222222
Q ss_pred HHHHHHhhCCCCCCCcchhhHHHHHHhc-CCCCCCcceehhhhhHHHHHHHHHHHH
Q 028174 138 FMVHLATIPITGTGINPARSFGAAVIYN-NDKAWDDHWIFWVGPFVGALAAAAYHQ 192 (212)
Q Consensus 138 ~~~~~~~~~~sG~~lNPA~~lg~~l~~~-~~~~~~~~~vy~v~p~lGaila~ll~~ 192 (212)
. + +|..|- + -++....... .+.+|.....|.+..++++++++.+=.
T Consensus 72 G---f-lGgfTT--F---STf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~ 118 (126)
T PRK14208 72 G---V-MGGFTT--Y---SSFNYETLALLEQGRLAAAAAYLLATVLGCLAAAFAAT 118 (126)
T ss_pred H---H-hcchhh--H---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 122220 0 0222222211 124566677899999999999876543
No 57
>PRK14213 camphor resistance protein CrcB; Provisional
Probab=20.47 E-value=2.5e+02 Score=20.59 Aligned_cols=27 Identities=7% Similarity=0.084 Sum_probs=21.6
Q ss_pred CchhHHHHHHHHHhHHHHHHHHHHHHH
Q 028174 45 VSLIRAVAYMVAQCLGAICGVGLVKAF 71 (212)
Q Consensus 45 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~ 71 (212)
-++.++..|+..++.++++++.+-+.+
T Consensus 90 ~~~~~a~~y~~~s~~~gl~a~~~G~~l 116 (118)
T PRK14213 90 KRVKESILYIALTLAGSLLAFWCGWTI 116 (118)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357788999999999999988765544
Done!