Query 028174
Match_columns 212
No_of_seqs 177 out of 1480
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 11:51:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028174.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028174hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cn5_A Aquaporin; membrane pro 100.0 1.3E-46 4.3E-51 321.4 13.9 195 18-212 110-304 (304)
2 3gd8_A Aquaporin-4; proton exc 100.0 7.6E-44 2.6E-48 293.1 17.9 171 19-197 53-223 (223)
3 3iyz_A Aquaporin-4; water tran 100.0 1.6E-43 5.5E-48 304.3 18.6 174 18-199 100-273 (340)
4 2f2b_A Aquaporin AQPM; protein 100.0 4.2E-43 1.4E-47 292.8 18.4 175 17-196 67-245 (246)
5 2zz9_A Aquaporin-4; water tran 100.0 2E-43 6.9E-48 301.0 16.7 173 18-198 61-233 (301)
6 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 3.6E-43 1.2E-47 295.6 17.1 172 19-198 57-229 (266)
7 2w2e_A AQY1, aquaporin, aquapo 100.0 5.6E-43 1.9E-47 296.2 18.2 172 18-200 98-269 (279)
8 2o9g_A Aquaporin Z; integral m 100.0 2.5E-43 8.7E-48 292.0 15.2 173 18-197 52-232 (234)
9 2b6o_A Aquaporin-0, lens fiber 100.0 1.2E-42 4.1E-47 292.3 19.1 172 19-198 55-226 (263)
10 1j4n_A Aquaporin 1; membrane p 100.0 2.7E-43 9.3E-48 297.3 15.2 172 19-198 65-236 (271)
11 1ldf_A Glycerol uptake facilit 100.0 1E-42 3.5E-47 295.4 16.8 177 19-198 55-258 (281)
12 3c02_A Aquaglyceroporin; membr 100.0 6E-43 2E-47 293.6 12.7 180 18-200 56-247 (258)
13 3llq_A Aquaporin Z 2; aquapori 100.0 5.5E-42 1.9E-46 286.4 15.7 170 19-195 78-253 (256)
14 2b6o_A Aquaporin-0, lens fiber 99.7 2E-17 7E-22 138.7 8.8 105 91-199 8-112 (263)
15 3gd8_A Aquaporin-4; proton exc 99.7 7E-17 2.4E-21 132.4 8.7 108 91-200 2-111 (223)
16 3d9s_A Aquaporin-5, AQP-5; aqu 99.7 7.1E-17 2.4E-21 135.5 7.9 106 90-199 9-114 (266)
17 2zz9_A Aquaporin-4; water tran 99.7 4.3E-16 1.5E-20 132.6 11.4 108 90-199 10-119 (301)
18 3llq_A Aquaporin Z 2; aquapori 99.7 8.4E-17 2.9E-21 134.2 6.6 107 89-197 26-133 (256)
19 3c02_A Aquaglyceroporin; membr 99.7 9.6E-17 3.3E-21 134.3 6.2 108 91-200 8-115 (258)
20 1j4n_A Aquaporin 1; membrane p 99.6 1.8E-16 6.1E-21 133.5 7.5 106 91-198 9-121 (271)
21 2f2b_A Aquaporin AQPM; protein 99.6 6.4E-16 2.2E-20 128.5 10.4 107 91-199 3-126 (246)
22 1ldf_A Glycerol uptake facilit 99.6 1.4E-16 4.8E-21 134.8 6.2 107 90-198 5-111 (281)
23 2o9g_A Aquaporin Z; integral m 99.6 1.5E-16 5.1E-21 131.4 5.7 105 92-198 4-109 (234)
24 3iyz_A Aquaporin-4; water tran 99.6 2E-16 6.9E-21 136.0 6.4 106 91-198 50-157 (340)
25 3cn5_A Aquaporin; membrane pro 99.6 5E-16 1.7E-20 132.4 7.4 107 90-198 58-167 (304)
26 2w2e_A AQY1, aquaporin, aquapo 99.6 6.6E-16 2.2E-20 130.4 6.3 106 91-198 43-155 (279)
27 3tds_E Formate/nitrite transpo 75.1 17 0.00057 29.8 8.8 153 38-201 95-262 (268)
28 3kcu_A Probable formate transp 64.3 59 0.002 26.7 10.7 77 39-115 99-184 (285)
29 3s2u_A UDP-N-acetylglucosamine 59.7 2.2 7.5E-05 36.1 0.4 18 27-44 12-29 (365)
30 3kly_A Putative formate transp 25.1 2.8E+02 0.0095 22.5 11.5 74 42-115 101-183 (280)
No 1
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=1.3e-46 Score=321.38 Aligned_cols=195 Identities=83% Similarity=1.371 Sum_probs=159.4
Q ss_pred HHHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHH
Q 028174 18 LVTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALG 97 (212)
Q Consensus 18 ~~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (212)
+.+.++++|||||+|||||+++++.|+++|++++.|+++|++||++|+.++|.++++.++..+.+.+.+.++.+.+++++
T Consensus 110 ~~v~~~g~iSGaHlNPAVTla~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~ 189 (304)
T 3cn5_A 110 VLVYCTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALG 189 (304)
T ss_dssp HHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHH
T ss_pred eeeeEeeccCCCccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHH
Confidence 34456788999999999999999999999999999999999999999999999999877666555555667789999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehh
Q 028174 98 AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFW 177 (212)
Q Consensus 98 ~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~ 177 (212)
.|+++||+|+++++...|+++...+.+.+.+.|+.+|+++.+..++.++.||+.+||||||||+++..+...|+++|+||
T Consensus 190 ~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~Wvyw 269 (304)
T 3cn5_A 190 AEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFW 269 (304)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEe
Confidence 99999999999999888765543221123478999999999999999999999999999999999854445799999999
Q ss_pred hhhHHHHHHHHHHHHHHcchhhhhhcCCCCCCCCC
Q 028174 178 VGPFVGALAAAAYHQYILRAAAIKALGSFRSNPSN 212 (212)
Q Consensus 178 v~p~lGaila~ll~~~l~~~~~~~~~~~~~~~~~~ 212 (212)
++|++|+++|+++|++++.+++.+...++|..+.|
T Consensus 270 vgPiiGa~laa~~y~~l~~~~~~~~~~~~~~~~~~ 304 (304)
T 3cn5_A 270 VGPFIGAAVAAAYHQYVLRAAAIKALGEFRSNPTN 304 (304)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCC-------------
T ss_pred ehHHHHHHHHHHHHHHHhCCCCCCcccccccCCCC
Confidence 99999999999999999988766665566665554
No 2
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.6e-44 Score=293.07 Aligned_cols=171 Identities=42% Similarity=0.765 Sum_probs=149.1
Q ss_pred HHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHH
Q 028174 19 VTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGA 98 (212)
Q Consensus 19 ~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (212)
.++.++++||||+|||||+++++.|+++|++++.|+++|++|+++|+.++|.++++.... ..+.+.+.++.+..++++.
T Consensus 53 ~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~-~lg~~~~~~~~s~~~~~~~ 131 (223)
T 3gd8_A 53 MVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTMVHGNLTAGHGLLV 131 (223)
T ss_dssp HHHHHHHHHCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHT-TTTCCCCCTTSCHHHHHHH
T ss_pred HHheecccccceEcHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-ceeeccCCCccCHHHHHHH
Confidence 345678899999999999999999999999999999999999999999999999875432 1233455667889999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehhh
Q 028174 99 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWV 178 (212)
Q Consensus 99 E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~v 178 (212)
|+++||+|++++++..|+++... ....|+.+|+++.+.....++.||++|||||||||+++.+ +|+++|+||+
T Consensus 132 E~i~Tf~Lv~~i~~~~~~~~~~~----~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~---~w~~~Wvy~v 204 (223)
T 3gd8_A 132 ELIITFQLVFTIFASCDSKRTDV----TGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWV 204 (223)
T ss_dssp HHHHHHHHHHHHHHHTCTTCSCC----CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCCc----cCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc---CCCcEEeehh
Confidence 99999999999999988766432 3467999999998777777788999999999999999975 7999999999
Q ss_pred hhHHHHHHHHHHHHHHcch
Q 028174 179 GPFVGALAAAAYHQYILRA 197 (212)
Q Consensus 179 ~p~lGaila~ll~~~l~~~ 197 (212)
+|++|+++++++|++++.|
T Consensus 205 gP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 205 GPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp HHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 9999999999999998754
No 3
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-43 Score=304.32 Aligned_cols=174 Identities=43% Similarity=0.758 Sum_probs=150.6
Q ss_pred HHHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHH
Q 028174 18 LVTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALG 97 (212)
Q Consensus 18 ~~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (212)
+.++++++|||||+|||||+++++.|+++|.+++.||++|++||++|+.++|.++++.... ..+.+.+.++.+..++++
T Consensus 100 ~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~-~lg~~~~~~~~s~~~~f~ 178 (340)
T 3iyz_A 100 TMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLL 178 (340)
T ss_pred HheeEeeccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcC-ceeeccCCCccCHHHHHH
Confidence 3445779999999999999999999999999999999999999999999999998765321 123344556788999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehh
Q 028174 98 AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFW 177 (212)
Q Consensus 98 ~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~ 177 (212)
.|+++||+|+++++++.++++... ....|+.+|+++.+.....++.||++|||||||||+++.+ .|.++|+||
T Consensus 179 ~E~i~Tf~Lv~~Ila~~d~~~~~~----~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~---~w~~~WVyw 251 (340)
T 3iyz_A 179 VELIITFQLVFTIFASCDDKRTDV----TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYW 251 (340)
T ss_pred HHHHHHHHHHHHHHHhhcCccCCc----ccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc---CCCcEeehh
Confidence 999999999999999888765432 3467999999998888887899999999999999999865 799999999
Q ss_pred hhhHHHHHHHHHHHHHHcchhh
Q 028174 178 VGPFVGALAAAAYHQYILRAAA 199 (212)
Q Consensus 178 v~p~lGaila~ll~~~l~~~~~ 199 (212)
++|++|+++|+++|++++.+++
T Consensus 252 vgPiiGailaallY~~l~~p~~ 273 (340)
T 3iyz_A 252 VGPIIGAVLAGALYEYVFCPDV 273 (340)
T ss_pred HHHHHHHHHHHHHHHHHhCCCh
Confidence 9999999999999999986643
No 4
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=4.2e-43 Score=292.78 Aligned_cols=175 Identities=31% Similarity=0.420 Sum_probs=150.6
Q ss_pred HHHHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhh-hcCCCccccCCCCchhhH
Q 028174 17 DLVTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYN-SLGGGANTVASGYNKGSA 95 (212)
Q Consensus 17 ~~~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 95 (212)
.+.+..++++||||+|||||+++++.|+++|++++.|+++|++||++|+.++|.+++++.. ......+.+.++.+.+++
T Consensus 67 ~~~v~~~g~iSGaH~NPAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~ 146 (246)
T 2f2b_A 67 AASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQA 146 (246)
T ss_dssp HHHHHHHTTTTCCCCSHHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHH
T ss_pred HHHhheecccccceeCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHH
Confidence 3445567899999999999999999999999999999999999999999999999987422 122233444467889999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHH--h-cCCCCCCc
Q 028174 96 LGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI--Y-NNDKAWDD 172 (212)
Q Consensus 96 ~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~--~-~~~~~~~~ 172 (212)
++.|+++|++|++++++..++++.. ....|+.+|+.+.+.+++.+++||+++||||||||+++ . +++..|++
T Consensus 147 ~~~E~i~Tf~Lv~~i~~~~~~~~~~-----~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~ 221 (246)
T 2f2b_A 147 MLAEVVGTFLLMITIMGIAVDERAP-----KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNY 221 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTSC-----TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGG
T ss_pred HHHHHHHHHHHHheeeEEecCCCCC-----CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcce
Confidence 9999999999999999876654432 34789999999999999999999999999999999993 3 34678999
Q ss_pred ceehhhhhHHHHHHHHHHHHHHcc
Q 028174 173 HWIFWVGPFVGALAAAAYHQYILR 196 (212)
Q Consensus 173 ~~vy~v~p~lGaila~ll~~~l~~ 196 (212)
.|+||++|++|+++|+++|+++++
T Consensus 222 ~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 222 YSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEeeeHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999875
No 5
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=2e-43 Score=301.02 Aligned_cols=173 Identities=43% Similarity=0.762 Sum_probs=149.9
Q ss_pred HHHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHH
Q 028174 18 LVTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALG 97 (212)
Q Consensus 18 ~~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (212)
+.++.+++|||||+|||||+++++.|+++|++++.|+++|++||++|+.++|.++++.... ..+.+.+.++.+..++++
T Consensus 61 ~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~-~~g~~~~~~~~s~~~~f~ 139 (301)
T 2zz9_A 61 TMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLL 139 (301)
T ss_dssp HHHHHHGGGTCCCCSHHHHHHHHHTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGG-TSSCCCCCSSCCHHHHHH
T ss_pred HhhheeccCCcceeChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-ceeeecCCcccchHHHHH
Confidence 3445778999999999999999999999999999999999999999999999999875432 223344556788999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehh
Q 028174 98 AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFW 177 (212)
Q Consensus 98 ~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~ 177 (212)
.|+++||+|++++++..++++... ....|+.+|+.+.+.....++.||+.+||||||||+++.+ .|.++|+||
T Consensus 140 ~E~i~Tf~Lv~~Il~~~d~~~~~~----~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~---~w~~~WVy~ 212 (301)
T 2zz9_A 140 VELIITFQLVFTIFASCDDKRTDV----TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYW 212 (301)
T ss_dssp HHHHHHHHHHHHHHHHSCSSSSCC----SSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC---CCTTTTHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCc----cchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC---CCcceeeee
Confidence 999999999999999887765422 3478999999998888888889999999999999999975 799999999
Q ss_pred hhhHHHHHHHHHHHHHHcchh
Q 028174 178 VGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 178 v~p~lGaila~ll~~~l~~~~ 198 (212)
++|++|+++|+++|++++.++
T Consensus 213 vgPiiGailaa~ly~~l~~~~ 233 (301)
T 2zz9_A 213 VGPIIGAVLAGALYEYVFCPD 233 (301)
T ss_dssp HHHHHHHHHHHHHHHTTTC--
T ss_pred eHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999998653
No 6
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-43 Score=295.61 Aligned_cols=172 Identities=39% Similarity=0.662 Sum_probs=150.8
Q ss_pred HHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHH
Q 028174 19 VTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGA 98 (212)
Q Consensus 19 ~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (212)
.+..++++||||+|||||+++++.|+++|++++.|+++|++||++|+.+++.++++.... ..+.+.+.++.+..++++.
T Consensus 57 ~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~-~~g~~~~~~~~s~~~~~~~ 135 (266)
T 3d9s_A 57 LAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARG-NLAVNALNNNTTQGQAMVV 135 (266)
T ss_dssp HHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHT-TTTCCCCCTTSCHHHHHHH
T ss_pred HHHHHcccCcceECHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccC-ceeeccCCccccHHHHHHH
Confidence 445678899999999999999999999999999999999999999999999999875422 2233445567889999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCc-ceehh
Q 028174 99 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDD-HWIFW 177 (212)
Q Consensus 99 E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~-~~vy~ 177 (212)
|+++||+|++++++..|+++... ....|+.+|+++.+..+..+++||+++||||||||+++.+ .|++ +|+||
T Consensus 136 E~i~Tf~Lv~~il~~~d~~~~~~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~~Wvy~ 208 (266)
T 3d9s_A 136 ELILTFQLALCIFASTDSRRTSP----VGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN---RFSPAHWVFW 208 (266)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCSC----CCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT---CCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCc----cchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC---CcccCEeeee
Confidence 99999999999999887665422 3478999999999999999999999999999999999875 7888 99999
Q ss_pred hhhHHHHHHHHHHHHHHcchh
Q 028174 178 VGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 178 v~p~lGaila~ll~~~l~~~~ 198 (212)
++|++|+++|+++|++++.++
T Consensus 209 vgP~~Ga~la~~~y~~l~~~~ 229 (266)
T 3d9s_A 209 VGPIVGAVLAAILYFYLLFPN 229 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTSCC
T ss_pred hHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999997653
No 7
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=5.6e-43 Score=296.15 Aligned_cols=172 Identities=34% Similarity=0.501 Sum_probs=150.1
Q ss_pred HHHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHH
Q 028174 18 LVTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALG 97 (212)
Q Consensus 18 ~~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (212)
+.+..++++||||+|||||+++++.|+++|++++.|+++|++||++|+.++|.++++... ..+.+.++.+..++++
T Consensus 98 ~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~----~~t~~~~~~s~~~~~~ 173 (279)
T 2w2e_A 98 VGVFITYRVSGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA----FANALGGGASRTRGLF 173 (279)
T ss_dssp HHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCC----CSCCCCTTCCHHHHHH
T ss_pred HHHHHHhhcCccccChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccce----eeccCCccccHHHHHH
Confidence 344567899999999999999999999999999999999999999999999999976531 2334455678899999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehh
Q 028174 98 AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFW 177 (212)
Q Consensus 98 ~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~ 177 (212)
.|+++||+|++++++..++++.. ..+.|+.+|+++.+..++.++.||+++||||||||+++.+ ..|.++|+||
T Consensus 174 ~E~i~Tf~Lv~~Il~~~~~~~~~-----~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~--~~~~~~WVy~ 246 (279)
T 2w2e_A 174 LEAFGTAILCLTVLMLAVEKHRA-----TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAAR--SFPNYHWIYW 246 (279)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSTT-----GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHT--CCCTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCCC-----cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhc--cchhhhhHHH
Confidence 99999999999999887665432 3478999999999999999999999999999999999975 3457899999
Q ss_pred hhhHHHHHHHHHHHHHHcchhhh
Q 028174 178 VGPFVGALAAAAYHQYILRAAAI 200 (212)
Q Consensus 178 v~p~lGaila~ll~~~l~~~~~~ 200 (212)
++|++|+++|+++|+++...+.+
T Consensus 247 vgPiiGa~la~~ly~~l~~~~~~ 269 (279)
T 2w2e_A 247 LGPILGAFLAYSIWQMWKWLNYQ 269 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHccCCC
Confidence 99999999999999999865543
No 8
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=2.5e-43 Score=291.97 Aligned_cols=173 Identities=31% Similarity=0.541 Sum_probs=146.6
Q ss_pred HHHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhh--hhhc-----CCCcc-ccCCC
Q 028174 18 LVTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHE--YNSL-----GGGAN-TVASG 89 (212)
Q Consensus 18 ~~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~~~-----~~~~~-~~~~~ 89 (212)
+.++.++++||||+|||||+++++.|+++|++++.|+++|++||++|+.++|.++++. ++.. ..+.. ....+
T Consensus 52 ~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~ 131 (234)
T 2o9g_A 52 TMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGG 131 (234)
T ss_dssp HHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTC
T ss_pred HHHHHhhccCcceeCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCc
Confidence 3344678899999999999999999999999999999999999999999999998753 2110 01111 11235
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCC
Q 028174 90 YNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKA 169 (212)
Q Consensus 90 ~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~ 169 (212)
.+.+++++.|+++|++|++++++..|+++. ....|+.+|+.+....++.++.||+++||||||||+++.+ +..
T Consensus 132 ~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~------~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g-~~~ 204 (234)
T 2o9g_A 132 YSMLSALVVELVLSAGFLLVIHGATDKFAP------AGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQG-GWA 204 (234)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTSTTSC------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-SHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCCCCc------cchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhC-CCC
Confidence 788999999999999999999998875432 3478999999999999999999999999999999999974 345
Q ss_pred CCcceehhhhhHHHHHHHHHHHHHHcch
Q 028174 170 WDDHWIFWVGPFVGALAAAAYHQYILRA 197 (212)
Q Consensus 170 ~~~~~vy~v~p~lGaila~ll~~~l~~~ 197 (212)
|+++|+||++|++|+++|+++|++++++
T Consensus 205 ~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 205 LEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 7799999999999999999999999875
No 9
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=1.2e-42 Score=292.30 Aligned_cols=172 Identities=34% Similarity=0.618 Sum_probs=151.7
Q ss_pred HHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHH
Q 028174 19 VTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGA 98 (212)
Q Consensus 19 ~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (212)
.+..++++||||+|||||+++++.|+++|.+.+.|+++|++||++|+.+++.++++.... ..+.+.+.++.+..++++.
T Consensus 55 ~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~ 133 (263)
T 2b6o_A 55 LVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATIV 133 (263)
T ss_dssp HHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCS-SCSCCCCCTTCCHHHHHHH
T ss_pred HHHHhhccCcCeeChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccc-ccccccCCccccHHHHHHH
Confidence 445678999999999999999999999999999999999999999999999999865422 1233445677889999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehhh
Q 028174 99 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWV 178 (212)
Q Consensus 99 E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~v 178 (212)
|+++||+|+++++++.|+++... ....|+.+|+.+.+..++.++.||+++||||||||+++.+ .|+++|+||+
T Consensus 134 E~i~Tf~Lv~~il~~~d~~~~~~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~Wvy~v 206 (263)
T 2b6o_A 134 EIFLTLQFVLCIFATYDERRNGR----LGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWV 206 (263)
T ss_dssp HHHHHHHHHHHHHHHSCTTSCSS----CCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT---CCTTCTHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCC----cccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC---CccceeHHHH
Confidence 99999999999999987665422 3478999999999999999999999999999999999875 8999999999
Q ss_pred hhHHHHHHHHHHHHHHcchh
Q 028174 179 GPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 179 ~p~lGaila~ll~~~l~~~~ 198 (212)
+|++|+++|+++|++++.++
T Consensus 207 gP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 207 GPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp HHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999997653
No 10
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=2.7e-43 Score=297.34 Aligned_cols=172 Identities=45% Similarity=0.789 Sum_probs=148.4
Q ss_pred HHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCccccCCCCchhhHHHH
Q 028174 19 VTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGA 98 (212)
Q Consensus 19 ~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (212)
.++.+++|||||+|||||+++++.|+++|++++.|+++|++||++|+.++|.++++.... ..+.+...++.+..++++.
T Consensus 65 ~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 143 (271)
T 1j4n_A 65 LAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN-SLGLNALAPGVNSGQGLGI 143 (271)
T ss_dssp HHHHHHHHHCCCCCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTC-CTTCCCCCTTCCTTGGGHH
T ss_pred HHHHHhcCCcceEcHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCccc-ccccccCCCccchHHHHHH
Confidence 345678999999999999999999999999999999999999999999999998653221 1233444567788999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCcceehhh
Q 028174 99 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWV 178 (212)
Q Consensus 99 E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~~~vy~v 178 (212)
|+++||+|++++++..|+++... ....|+.+|+.+.+.....++.||+.+||||||||+++.+ .|+++|+||+
T Consensus 144 E~i~T~~Lv~~i~~~~d~~~~~~----~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~---~~~~~wv~~v 216 (271)
T 1j4n_A 144 EIIGTLQLVLCVLATTDRRRRDL----GGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH---NFQDHWIFWV 216 (271)
T ss_dssp HHHHHHHHHHHHHHHTCSSCCCC----CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT---CCTTTTHHHH
T ss_pred HHHHHHHHHHHHHhhccccCCCc----cccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC---CCcceeHHHH
Confidence 99999999999999887765422 3478999999999887877789999999999999999864 7999999999
Q ss_pred hhHHHHHHHHHHHHHHcchh
Q 028174 179 GPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 179 ~p~lGaila~ll~~~l~~~~ 198 (212)
+|++|+++|+++|++++.++
T Consensus 217 gP~~Ga~la~~~y~~~~~~~ 236 (271)
T 1j4n_A 217 GPFIGAALAVLIYDFILAPR 236 (271)
T ss_dssp HHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999998653
No 11
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=1e-42 Score=295.42 Aligned_cols=177 Identities=27% Similarity=0.361 Sum_probs=148.8
Q ss_pred HHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcC-----------------C
Q 028174 19 VTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLG-----------------G 81 (212)
Q Consensus 19 ~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~-----------------~ 81 (212)
.+..++++||||+|||||+++++.|+++|++++.|+++|++||++|+.++|.++++.++..+ .
T Consensus 55 ~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 134 (281)
T 1ldf_A 55 AIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGT 134 (281)
T ss_dssp HHHHHHHHHCCCCSHHHHHHHHHHSCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTT
T ss_pred HhheecccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccce
Confidence 34456889999999999999999999999999999999999999999999999987543211 1
Q ss_pred CccccCCCCchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHH
Q 028174 82 GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAA 161 (212)
Q Consensus 82 ~~~~~~~~~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~ 161 (212)
..+.+.++.+.+++++.|+++||+|++++++..|+++.... ..+.|+.+|+.+.+..++.++.||+++||||||||+
T Consensus 135 f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~---~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPa 211 (281)
T 1ldf_A 135 FSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPR---GPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPK 211 (281)
T ss_dssp TSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHCTTSSSCC---GGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred eeccCCccccHHHHHHHHHHHHHHHHHHHHHHhccCCCCcc---cchHHHHHHHHHHHHHHhcccccccccCcHhhHHHH
Confidence 12234456789999999999999999999999887654311 357899999999999999999999999999999999
Q ss_pred HHhc----CCC------CCCcceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 162 VIYN----NDK------AWDDHWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 162 l~~~----~~~------~~~~~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
++.. +.. +|.++|+||++|++|+++|+++|++++.++
T Consensus 212 l~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~~ 258 (281)
T 1ldf_A 212 VFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRH 258 (281)
T ss_dssp HHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHhcccccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCcc
Confidence 9862 111 223799999999999999999999998654
No 12
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=6e-43 Score=293.56 Aligned_cols=180 Identities=20% Similarity=0.264 Sum_probs=149.4
Q ss_pred HHHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCC----CccccCCCCchh
Q 028174 18 LVTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG----GANTVASGYNKG 93 (212)
Q Consensus 18 ~~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 93 (212)
+.+..++++||||+|||||+++++.|+++|++++.|+++|++||++|+.++|.++++.++..+. +......+.+..
T Consensus 56 ~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~ 135 (258)
T 3c02_A 56 FGILVSAKLSGAHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLT 135 (258)
T ss_dssp HHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHH
T ss_pred HHHheecccCcCeeChHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchH
Confidence 3444678899999999999999999999999999999999999999999999999887654321 111222345566
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCch-hHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhc---CCCC
Q 028174 94 SALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLA-PLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN---NDKA 169 (212)
Q Consensus 94 ~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~-~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~---~~~~ 169 (212)
++++.|+++||+|++++++..|+|+.... ..+. |+.+|+++....++.++.||+++||||||||+++.. +...
T Consensus 136 ~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~~---~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~ 212 (258)
T 3c02_A 136 GAFFNELILTGILLLVILVVVDENICGKF---HILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDT 212 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHCSC---CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcccCCcc---cccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccc
Confidence 79999999999999999998876643111 3467 999999999999999999999999999999999863 2233
Q ss_pred C----CcceehhhhhHHHHHHHHHHHHHHcchhhh
Q 028174 170 W----DDHWIFWVGPFVGALAAAAYHQYILRAAAI 200 (212)
Q Consensus 170 ~----~~~~vy~v~p~lGaila~ll~~~l~~~~~~ 200 (212)
| .++|+||++|++|+++|+++|++++.++..
T Consensus 213 ~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~~~ 247 (258)
T 3c02_A 213 FTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPLVD 247 (258)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred cccCCceeehHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 4 679999999999999999999999876544
No 13
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=5.5e-42 Score=286.37 Aligned_cols=170 Identities=33% Similarity=0.510 Sum_probs=144.0
Q ss_pred HHhhcccccccccchHHHHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhh--hhhcCCC---c-cccCCCCch
Q 028174 19 VTGCVIFVVGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHE--YNSLGGG---A-NTVASGYNK 92 (212)
Q Consensus 19 ~~~~~~~iSGaH~NPaVTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~~~~~~---~-~~~~~~~~~ 92 (212)
.++.+++|||||+|||||+++++.|+++|++++.|+++|++||++|+.++|.++++. ++..+.. . ...+...+.
T Consensus 78 ~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~ 157 (256)
T 3llq_A 78 MAYAVGGISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSL 157 (256)
T ss_dssp HHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCH
T ss_pred HHheeeccccceEchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCH
Confidence 345677899999999999999999999999999999999999999999999998542 2211101 1 111235788
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCCCc
Q 028174 93 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDD 172 (212)
Q Consensus 93 ~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~~~ 172 (212)
.++++.|+++||+|++++++..|+++. ....|+.+|+++.+..++.++.||+++||||||||+++.+ +..|++
T Consensus 158 ~~~f~~E~i~Tf~Lv~~il~~~d~~~~------~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g-~~~~~~ 230 (256)
T 3llq_A 158 VSALLIEIILTAFFLIVILGSTHGRVP------AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG-GWALQQ 230 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTSC------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCC------ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcC-CCcccc
Confidence 999999999999999999998876543 3478999999999999999999999999999999999864 345779
Q ss_pred ceehhhhhHHHHHHHHHHHHHHc
Q 028174 173 HWIFWVGPFVGALAAAAYHQYIL 195 (212)
Q Consensus 173 ~~vy~v~p~lGaila~ll~~~l~ 195 (212)
+|+||++|++|+++|+++|+++.
T Consensus 231 ~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 231 LWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeeeeeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999985
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.71 E-value=2e-17 Score=138.68 Aligned_cols=105 Identities=23% Similarity=0.190 Sum_probs=88.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCC
Q 028174 91 NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAW 170 (212)
Q Consensus 91 ~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~ 170 (212)
+.++.++.||++|++|+++.++...+.... .......++.+|+++++.+++.+++||+|+|||++++..+.. +.+|
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~--~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g--~~~~ 83 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPG--PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGS--QMSL 83 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSS--SCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTT--CSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhc--CCCH
Confidence 567899999999999999998766542111 101224678999999999999999999999999999999964 4889
Q ss_pred CcceehhhhhHHHHHHHHHHHHHHcchhh
Q 028174 171 DDHWIFWVGPFVGALAAAAYHQYILRAAA 199 (212)
Q Consensus 171 ~~~~vy~v~p~lGaila~ll~~~l~~~~~ 199 (212)
.+.|.||++|++|+++|+.+++.+++++.
T Consensus 84 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~ 112 (263)
T 2b6o_A 84 LRAICYVVAQLLGAVAGAAVLYSVTPPAV 112 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 99999999999999999999999997643
No 15
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.68 E-value=7e-17 Score=132.40 Aligned_cols=108 Identities=17% Similarity=0.167 Sum_probs=87.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccCCCCC-C-CCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCC
Q 028174 91 NKGSALGAEIIGTFVLVYTVFSATDPKRSA-R-DSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDK 168 (212)
Q Consensus 91 ~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~-~-~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~ 168 (212)
+.+|.+++||++|++|++..++......+. + ...+....++.+|+++++.+++.+++||+|+|||+|++..+.. +.
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g--~~ 79 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTR--KI 79 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT--SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcC--CC
Confidence 368899999999999999888765432111 1 1111235678899999999999999999999999999999864 48
Q ss_pred CCCcceehhhhhHHHHHHHHHHHHHHcchhhh
Q 028174 169 AWDDHWIFWVGPFVGALAAAAYHQYILRAAAI 200 (212)
Q Consensus 169 ~~~~~~vy~v~p~lGaila~ll~~~l~~~~~~ 200 (212)
+|.+...|+++|++|+++|+.+.+.+++++..
T Consensus 80 ~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~ 111 (223)
T 3gd8_A 80 SIAKSVFYIAAQCLGAIIGAGILYLVTPPSVV 111 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 89999999999999999999999998876543
No 16
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.67 E-value=7.1e-17 Score=135.50 Aligned_cols=106 Identities=23% Similarity=0.206 Sum_probs=88.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCC
Q 028174 90 YNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKA 169 (212)
Q Consensus 90 ~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~ 169 (212)
.+.++.+++||++|++|++..++...+..... ......++.+|+++++.+++++++||+|+|||+|++..+.. +.+
T Consensus 9 ~~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~--~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g--~~~ 84 (266)
T 3d9s_A 9 VAFLKAVFAEFLATLIFVFFGLGSALKWPSAL--PTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGN--QIS 84 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSC--CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTS--SSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--ccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhc--CCC
Confidence 35678999999999999999887664322211 11234678999999999999999999999999999999964 488
Q ss_pred CCcceehhhhhHHHHHHHHHHHHHHcchhh
Q 028174 170 WDDHWIFWVGPFVGALAAAAYHQYILRAAA 199 (212)
Q Consensus 170 ~~~~~vy~v~p~lGaila~ll~~~l~~~~~ 199 (212)
|.+.+.||++|++|+++|+.+.+.+++++.
T Consensus 85 ~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~ 114 (266)
T 3d9s_A 85 LLRAFFYVAAQLVGAIAGAGILYGVAPLNA 114 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 999999999999999999999999997643
No 17
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.66 E-value=4.3e-16 Score=132.62 Aligned_cols=108 Identities=17% Similarity=0.160 Sum_probs=88.1
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhccCCCCCCC--CCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCC
Q 028174 90 YNKGSALGAEIIGTFVLVYTVFSATDPKRSARD--SHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNND 167 (212)
Q Consensus 90 ~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~--~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~ 167 (212)
.+.+|.+++||++|++|++..++.......... .......++.+|+++++.+++++++||+|+|||+|++..+.. +
T Consensus 10 ~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g--~ 87 (301)
T 2zz9_A 10 QAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTR--K 87 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTS--S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhc--C
Confidence 357899999999999999998875543221111 111234678999999999999999999999999999999965 4
Q ss_pred CCCCcceehhhhhHHHHHHHHHHHHHHcchhh
Q 028174 168 KAWDDHWIFWVGPFVGALAAAAYHQYILRAAA 199 (212)
Q Consensus 168 ~~~~~~~vy~v~p~lGaila~ll~~~l~~~~~ 199 (212)
.+|.+...|+++|++|+++|+.+.+.+++++.
T Consensus 88 ~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~ 119 (301)
T 2zz9_A 88 ISIAKSVFYITAQCLGAIIGAGILYLVTPPSV 119 (301)
T ss_dssp SCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 89999999999999999999999999987643
No 18
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.66 E-value=8.4e-17 Score=134.16 Aligned_cols=107 Identities=26% Similarity=0.215 Sum_probs=84.9
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhccC-CCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCC
Q 028174 89 GYNKGSALGAEIIGTFVLVYTVFSATDP-KRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNND 167 (212)
Q Consensus 89 ~~~~~~~~~~E~~~T~ilv~~v~~~~~~-~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~ 167 (212)
..+.+|.+++||++|++|++..++.... ........+....++.+|+++++.+++++++||+|+|||+|++..+.. +
T Consensus 26 ~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g--~ 103 (256)
T 3llq_A 26 SYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAG--R 103 (256)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT--S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhc--C
Confidence 3457899999999999999988765321 111111111234578999999999999999999999999999999965 4
Q ss_pred CCCCcceehhhhhHHHHHHHHHHHHHHcch
Q 028174 168 KAWDDHWIFWVGPFVGALAAAAYHQYILRA 197 (212)
Q Consensus 168 ~~~~~~~vy~v~p~lGaila~ll~~~l~~~ 197 (212)
.+|.+.+.|+++|++|+++|+.+.+.+++.
T Consensus 104 ~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~ 133 (256)
T 3llq_A 104 FPASSLVPYVIAQVAGAIVAAAALYVIATG 133 (256)
T ss_dssp SCGGGHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 899999999999999999999998888753
No 19
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.65 E-value=9.6e-17 Score=134.28 Aligned_cols=108 Identities=21% Similarity=0.198 Sum_probs=86.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCC
Q 028174 91 NKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAW 170 (212)
Q Consensus 91 ~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~ 170 (212)
+.+|.+++||++|++|++..+++.......+........++.+|+++++.+++++++||+|+|||+|++..+.. +.+|
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g--~~~~ 85 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSIN--KFDL 85 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT--SSCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhC--CCcH
Confidence 56789999999999999987653321111111111234678899999999999999999999999999999965 4899
Q ss_pred CcceehhhhhHHHHHHHHHHHHHHcchhhh
Q 028174 171 DDHWIFWVGPFVGALAAAAYHQYILRAAAI 200 (212)
Q Consensus 171 ~~~~vy~v~p~lGaila~ll~~~l~~~~~~ 200 (212)
.+...|+++|++|+++|+.+.+.+++++..
T Consensus 86 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~ 115 (258)
T 3c02_A 86 KKIPVYFFAQLLGAFVGTSTVYGLYHGFIS 115 (258)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcchhhh
Confidence 999999999999999999999999876543
No 20
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.65 E-value=1.8e-16 Score=133.49 Aligned_cols=106 Identities=17% Similarity=0.202 Sum_probs=85.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccCC------CCCCC-CCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHH
Q 028174 91 NKGSALGAEIIGTFVLVYTVFSATDPK------RSARD-SHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI 163 (212)
Q Consensus 91 ~~~~~~~~E~~~T~ilv~~v~~~~~~~------~~~~~-~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~ 163 (212)
+.+|.+++||++|++|++..++..... +.... .......++.+|+++++.+++++++||+|+|||+|++..+.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 467899999999999999877643211 00011 00123467899999999999999999999999999999996
Q ss_pred hcCCCCCCcceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 164 YNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 164 ~~~~~~~~~~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
. +.+|.+...||++|++|+++|+.+.+.++++.
T Consensus 89 g--~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 121 (271)
T 1j4n_A 89 C--QISVLRAIMYIIAQCVGAIVATAILSGITSSL 121 (271)
T ss_dssp T--SSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred C--CCCHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 5 48899999999999999999999999888643
No 21
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.64 E-value=6.4e-16 Score=128.48 Aligned_cols=107 Identities=22% Similarity=0.174 Sum_probs=85.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccC-----CCCC-----CCCCC-------CCchhHHHHHHHHHHHHHhhCCCCCCCc
Q 028174 91 NKGSALGAEIIGTFVLVYTVFSATDP-----KRSA-----RDSHV-------PVLAPLPIGFAVFMVHLATIPITGTGIN 153 (212)
Q Consensus 91 ~~~~~~~~E~~~T~ilv~~v~~~~~~-----~~~~-----~~~~~-------~~~~~~~ig~~v~~~~~~~~~~sG~~lN 153 (212)
+.+|.+++||++|++|++..++.... +.+. +...+ ....++.+|+++++.+++.+++||+|+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 56789999999999999987743211 1000 00000 0126889999999999999999999999
Q ss_pred chhhHHHHHHhcCCCCCCcceehhhhhHHHHHHHHHHHHHHcchhh
Q 028174 154 PARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAA 199 (212)
Q Consensus 154 PA~~lg~~l~~~~~~~~~~~~vy~v~p~lGaila~ll~~~l~~~~~ 199 (212)
||+|++..+.. +.+|.+...|+++|++|+++|+.+.+.+++++.
T Consensus 83 PAVTla~~~~g--~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~ 126 (246)
T 2f2b_A 83 PAVTIGLWSVK--KFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGA 126 (246)
T ss_dssp HHHHHHHHHTT--SSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHH
T ss_pred HHHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 99999999965 489999999999999999999999999988743
No 22
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.64 E-value=1.4e-16 Score=134.82 Aligned_cols=107 Identities=21% Similarity=0.145 Sum_probs=85.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCC
Q 028174 90 YNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKA 169 (212)
Q Consensus 90 ~~~~~~~~~E~~~T~ilv~~v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~ 169 (212)
.+.++.+++||++|++|++..+++.......+...+....++.+|+++++.+++++++||+|+|||+|++..+..+ .+
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~ 82 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFAC--FD 82 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSC--CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCC--CC
Confidence 3568899999999999999777533211000011112236889999999999999999999999999999999754 89
Q ss_pred CCcceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 170 WDDHWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 170 ~~~~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
|.+...|+++|++|+++|+.+.+.+++++
T Consensus 83 ~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~ 111 (281)
T 1ldf_A 83 KRKVIPFIVSQVAGAFCAAALVYGLYYNL 111 (281)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999998888764
No 23
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.64 E-value=1.5e-16 Score=131.36 Aligned_cols=105 Identities=23% Similarity=0.156 Sum_probs=85.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhccCCC-CCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCCCC
Q 028174 92 KGSALGAEIIGTFVLVYTVFSATDPKR-SARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAW 170 (212)
Q Consensus 92 ~~~~~~~E~~~T~ilv~~v~~~~~~~~-~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~~~ 170 (212)
..|.+++||++|++|++..++....++ ...........++.+|+++++.+++.+++||+|+|||+|++..+.. +.+|
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g--~~~~ 81 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGG--RFPA 81 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT--SSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhC--CCCH
Confidence 578899999999999998876432221 1111111234678999999999999999999999999999999965 4899
Q ss_pred CcceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 171 DDHWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 171 ~~~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
.+...|+++|++|+++|+.+.+.++++.
T Consensus 82 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~ 109 (234)
T 2o9g_A 82 KEVVGYVIAQVVGGIVAAALLYLIASGK 109 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 9999999999999999999998888643
No 24
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.63 E-value=2e-16 Score=136.03 Aligned_cols=106 Identities=17% Similarity=0.140 Sum_probs=86.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccCCCC--CCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcCCC
Q 028174 91 NKGSALGAEIIGTFVLVYTVFSATDPKRS--ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDK 168 (212)
Q Consensus 91 ~~~~~~~~E~~~T~ilv~~v~~~~~~~~~--~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~~~ 168 (212)
+.+|.+++||++||+|++..++....... ..........++.+|+++++.+++++++||+|+|||+|++..+.. ..
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G--~~ 127 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTR--KI 127 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcC--CC
Confidence 45889999999999999988865432211 111111345688999999999999999999999999999999864 48
Q ss_pred CCCcceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 169 AWDDHWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 169 ~~~~~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
+|.+...||++|++|+++|+.+.+.+++++
T Consensus 128 ~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~ 157 (340)
T 3iyz_A 128 SIAKSVFYITAQCLGAIIGAGILYLVTPPS 157 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 999999999999999999999988888654
No 25
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.62 E-value=5e-16 Score=132.44 Aligned_cols=107 Identities=19% Similarity=0.253 Sum_probs=86.2
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhccC---CCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcC
Q 028174 90 YNKGSALGAEIIGTFVLVYTVFSATDP---KRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNN 166 (212)
Q Consensus 90 ~~~~~~~~~E~~~T~ilv~~v~~~~~~---~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~ 166 (212)
.+.+|.+++||++|++|++..++.... ........+....++.+|+++++.+++++++||+|+|||+|++..+..+
T Consensus 58 ~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~- 136 (304)
T 3cn5_A 58 WSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARK- 136 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCC-
Confidence 356789999999999999988754321 1111111112346788999999999999999999999999999999654
Q ss_pred CCCCCcceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 167 DKAWDDHWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 167 ~~~~~~~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
.+|.+...|+++|++|+++|+.+.+.+++++
T Consensus 137 -~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 167 (304)
T 3cn5_A 137 -VELLRALVYMIAQCLGAICGVGLVKAFMKGP 167 (304)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 8899999999999999999999999998765
No 26
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.60 E-value=6.6e-16 Score=130.40 Aligned_cols=106 Identities=18% Similarity=0.283 Sum_probs=84.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhc---cCCCC---CCCC-CCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHH
Q 028174 91 NKGSALGAEIIGTFVLVYTVFSAT---DPKRS---ARDS-HVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI 163 (212)
Q Consensus 91 ~~~~~~~~E~~~T~ilv~~v~~~~---~~~~~---~~~~-~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~ 163 (212)
+.++.+++||++|++|++..++.. ..... .... ......++.+|+++++.+++++++||+|+|||+|++..+.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 567789999999999999876531 11110 0000 0122467899999999999999999999999999999996
Q ss_pred hcCCCCCCcceehhhhhHHHHHHHHHHHHHHcchh
Q 028174 164 YNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAA 198 (212)
Q Consensus 164 ~~~~~~~~~~~vy~v~p~lGaila~ll~~~l~~~~ 198 (212)
. +.+|.+...|+++|++|+++|+.+.+.+++++
T Consensus 123 g--~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~ 155 (279)
T 2w2e_A 123 R--AIPPFRGILMAFTQIVAGMAAAGAASAMTPGE 155 (279)
T ss_dssp T--SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred C--CCCHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 5 48999999999999999999999999988654
No 27
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=75.12 E-value=17 Score=29.84 Aligned_cols=153 Identities=10% Similarity=0.065 Sum_probs=74.6
Q ss_pred HHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhcCCCc--------cccCCCCchhhHHHHHHHHHHHHHHH
Q 028174 38 GLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGA--------NTVASGYNKGSALGAEIIGTFVLVYT 109 (212)
Q Consensus 38 a~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~E~~~T~ilv~~ 109 (212)
.-.+.||.+|.+.+--+.-=.+|=++|+.++-.+....-. .+.+. .....+.+.++.|+-=.++-++..+.
T Consensus 95 ~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~-~~~~~~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVcla 173 (268)
T 3tds_E 95 AGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGL-VDKGPVAEFFANTAASKASMPFTALFFRGILCNILVCVS 173 (268)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-TSSSHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-CCCcHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 3456789999999888777777777777666544421100 00000 00012356677777777788877777
Q ss_pred HHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHhcC--CCCCCcce----ehhhhhHHH
Q 028174 110 VFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNN--DKAWDDHW----IFWVGPFVG 183 (212)
Q Consensus 110 v~~~~~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~lg~~l~~~~--~~~~~~~~----vy~v~p~lG 183 (212)
+......|... -.-+.+-+.+++. ......=...|--. +...++.+. +.+|.+.+ .=.+|.++|
T Consensus 174 Vw~~~~~k~~~-------gKi~~i~~pi~~F--v~~GfEH~VANm~~-~~~~~~~~~~~~~t~~~~~~nlipvtlGNiiG 243 (268)
T 3tds_E 174 VLCSFRTNSDT-------AKIIMIFLCLFAI--ITSGFEHSVANMTI-YSVSLFSPTISTVTIGGAIYNLVAVTLGNIVG 243 (268)
T ss_dssp HHHHHSCSCHH-------HHHHHHHHHHHHH--HHHTCCCHHHHHHH-HHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCchh-------hHHHHHHHHHHHH--HHccchHHHHHHHH-HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 76543322211 1112222222222 22222212223211 112222221 33443322 223688888
Q ss_pred HH-HHHHHHHHHcchhhhh
Q 028174 184 AL-AAAAYHQYILRAAAIK 201 (212)
Q Consensus 184 ai-la~ll~~~l~~~~~~~ 201 (212)
+. +-++.|.+.++++++.
T Consensus 244 G~~fvgl~y~~~~~~~~~~ 262 (268)
T 3tds_E 244 GALFMGLGTYILGKEKLNA 262 (268)
T ss_dssp HHTTHHHHHHHHHCCC---
T ss_pred HHHHHHHHHHHHhCCcccc
Confidence 74 4677888888765543
No 28
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=64.27 E-value=59 Score=26.71 Aligned_cols=77 Identities=14% Similarity=0.167 Sum_probs=43.3
Q ss_pred HHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHHhh--hhhhhcCC--C-----ccccCCCCchhhHHHHHHHHHHHHHHH
Q 028174 39 LFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMK--HEYNSLGG--G-----ANTVASGYNKGSALGAEIIGTFVLVYT 109 (212)
Q Consensus 39 ~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~~~~~~~~--~-----~~~~~~~~~~~~~~~~E~~~T~ilv~~ 109 (212)
..+.||.+|.+.+--+.-=.+|=++|+.++-.+.. ......++ . ......+.+.++.|+-=.++-++..+.
T Consensus 99 a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVcla 178 (285)
T 3kcu_A 99 AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLA 178 (285)
T ss_dssp HHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 34578899988876665555666666655544321 11110000 0 000123456778888778888888877
Q ss_pred HHHhcc
Q 028174 110 VFSATD 115 (212)
Q Consensus 110 v~~~~~ 115 (212)
+.....
T Consensus 179 Vw~~~~ 184 (285)
T 3kcu_A 179 VWMSYS 184 (285)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 776543
No 29
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=59.68 E-value=2.2 Score=36.08 Aligned_cols=18 Identities=28% Similarity=0.540 Sum_probs=15.7
Q ss_pred cccccchHHHHHHHHhcC
Q 028174 27 VGGHINPAVTFGLFLARK 44 (212)
Q Consensus 27 SGaH~NPaVTla~~~~g~ 44 (212)
||||++|+++++..+..+
T Consensus 12 TgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 12 TGGHVFPALACAREFQAR 29 (365)
T ss_dssp SHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhC
Confidence 679999999999998743
No 30
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=25.06 E-value=2.8e+02 Score=22.53 Aligned_cols=74 Identities=16% Similarity=0.243 Sum_probs=41.8
Q ss_pred hcCCchhHHHHHHHHHhHHHHHHHHHHHHHhh--hhhhhcCC--C-----ccccCCCCchhhHHHHHHHHHHHHHHHHHH
Q 028174 42 ARKVSLIRAVAYMVAQCLGAICGVGLVKAFMK--HEYNSLGG--G-----ANTVASGYNKGSALGAEIIGTFVLVYTVFS 112 (212)
Q Consensus 42 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~~~~~~~~--~-----~~~~~~~~~~~~~~~~E~~~T~ilv~~v~~ 112 (212)
.||.+|++.+--+.-=.+|=++|+.++-.+.. ......++ . ......+.+.++.|+-=.++-++..+.+..
T Consensus 101 ~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~ 180 (280)
T 3kly_A 101 SGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWM 180 (280)
T ss_dssp SSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888777766666666666665544421 11110000 0 000123456778888778888888877776
Q ss_pred hcc
Q 028174 113 ATD 115 (212)
Q Consensus 113 ~~~ 115 (212)
...
T Consensus 181 ~~~ 183 (280)
T 3kly_A 181 TFS 183 (280)
T ss_dssp HTT
T ss_pred Hhh
Confidence 543
Done!