Query 028178
Match_columns 212
No_of_seqs 135 out of 1092
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 11:58:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028178.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028178hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1olm_A SEC14-like protein 2; l 94.9 0.41 1.4E-05 40.4 12.4 34 89-122 350-385 (403)
2 2p9r_A Alpha-2-M, alpha-2-macr 93.1 1.2 4.2E-05 29.6 10.5 65 42-108 15-86 (102)
3 2d7n_A Filamin-C; beta-sandwic 92.9 0.31 1.1E-05 32.5 6.1 46 64-109 21-69 (93)
4 2ee9_A Filamin-B; beta-sandwic 92.7 0.28 9.4E-06 32.9 5.7 47 63-109 28-77 (95)
5 2d7p_A Filamin-C; beta-sandwic 91.2 1.1 3.7E-05 30.8 7.5 54 51-109 32-88 (112)
6 2dmb_A Filamin-B; beta-sandwic 90.7 1.5 5.3E-05 30.6 8.0 47 63-109 41-90 (124)
7 2d7m_A Filamin-C; beta-sandwic 90.3 1.6 5.4E-05 29.9 7.8 46 64-109 43-91 (115)
8 3rgh_A Filamin-A; cell adhesio 89.9 2.3 8E-05 28.3 8.2 45 64-108 38-85 (100)
9 3cnk_A Filamin-A; FLNA24, X-RA 89.4 2 6.9E-05 27.8 7.4 45 64-108 29-76 (89)
10 2dj4_A Filamin-B; beta-sandwic 88.8 2.2 7.6E-05 28.8 7.5 46 63-108 41-89 (108)
11 2ee6_A Filamin-B; beta-sandwic 88.5 2.5 8.4E-05 28.4 7.5 44 64-108 41-86 (105)
12 4dzg_A PLIG; lysozyme inhibito 88.3 2 6.8E-05 29.6 7.0 66 31-108 28-96 (114)
13 2dlg_A Filamin-B; beta-sandwic 88.2 0.81 2.8E-05 30.9 4.8 46 64-109 30-78 (102)
14 1v05_A Filamin C; actin-bindin 86.9 4.1 0.00014 26.7 7.7 45 64-108 36-83 (96)
15 2e9j_A Filamin-B; beta-sandwic 86.3 1.7 5.8E-05 30.0 5.7 45 64-108 53-100 (119)
16 2dic_A Filamin-B; beta-sandwic 86.3 4.6 0.00016 27.0 7.9 44 64-108 41-86 (105)
17 2dia_A Filamin-B; beta-sandwic 85.9 4.3 0.00015 27.6 7.6 45 64-108 41-88 (113)
18 2w0p_A Filamin-A; alternative 85.7 5.6 0.00019 26.0 8.2 44 64-108 33-78 (94)
19 2eea_A Filamin-B; beta-sandwic 85.6 5.2 0.00018 27.3 7.9 44 64-108 51-96 (115)
20 2dmc_A Filamin-B; beta-sandwic 84.7 1.1 3.9E-05 30.9 4.1 46 64-109 44-92 (116)
21 2nqc_A Filamin-C; immunoglobul 83.3 5.4 0.00019 28.4 7.4 44 64-108 75-119 (138)
22 2bp3_A Filamin A; structural p 83.1 6.1 0.00021 25.9 7.2 44 64-108 36-81 (97)
23 2k9u_A Gamma filamin; cytoskel 83.0 7.5 0.00026 26.6 7.9 44 64-108 48-93 (119)
24 3d33_A Domain of unknown funct 80.2 9.7 0.00033 25.9 7.4 45 64-108 48-97 (108)
25 2eec_A Filamin-B; beta-sandwic 79.1 9.8 0.00034 26.4 7.4 53 51-108 42-95 (125)
26 2k7p_A Filamin-A; IG-like, ABP 78.2 12 0.00043 27.7 8.2 44 64-108 127-172 (188)
27 2ds4_A Tripartite motif protei 78.0 8.7 0.0003 25.7 6.8 45 64-108 48-97 (113)
28 2dib_A Filamin-B; beta-sandwic 77.5 2.5 8.5E-05 29.5 3.9 46 64-109 56-104 (128)
29 4fxk_A Complement C4 beta chai 77.1 21 0.00071 31.6 10.7 66 40-108 131-202 (656)
30 2d7o_A Filamin-C; beta-sandwic 76.5 6.5 0.00022 26.6 5.7 44 64-108 41-86 (111)
31 2k7p_A Filamin-A; IG-like, ABP 76.5 6 0.0002 29.5 6.0 45 64-108 33-80 (188)
32 3osv_A Flagellar basal-BODY RO 75.3 9.8 0.00034 26.8 6.6 55 45-107 25-90 (138)
33 4b7l_A Filamin-B; structural p 75.3 11 0.00038 31.1 7.8 45 64-108 286-335 (347)
34 3irp_X URO-adherence factor A; 74.6 5.1 0.00018 34.2 5.7 45 64-108 329-373 (429)
35 2di9_A Filamin-B; beta-sandwic 74.4 16 0.00056 25.4 7.5 44 64-108 61-106 (131)
36 3c12_A FLGD, flagellar protein 73.3 21 0.00072 25.0 8.0 43 65-107 39-92 (138)
37 2hr0_A Complement C3 beta chai 72.3 45 0.0015 29.6 11.6 65 40-107 117-189 (645)
38 3hd7_B Syntaxin-1A; membrane p 72.0 20 0.00068 24.2 9.1 20 133-152 21-40 (109)
39 1qfh_A Protein (gelation facto 71.3 9.4 0.00032 28.8 6.1 45 64-109 134-181 (212)
40 2di8_A Filamin-B; beta-sandwic 70.7 21 0.00073 24.0 7.4 44 64-108 41-86 (111)
41 2k7q_A Filamin-A; IG-like, ABP 70.1 9.7 0.00033 28.3 5.8 46 63-108 29-77 (191)
42 1wlh_A Gelation factor; ABP-12 66.8 13 0.00043 29.9 6.2 45 64-109 233-280 (311)
43 2k7q_A Filamin-A; IG-like, ABP 66.7 18 0.00063 26.7 6.7 44 64-108 127-172 (191)
44 2pn5_A TEP1R, thioester-contai 65.8 40 0.0014 32.8 10.5 66 42-108 113-185 (1325)
45 3sd2_A Putative member of DUF3 63.9 30 0.001 23.2 6.8 63 32-109 27-92 (101)
46 3hrz_A Cobra venom factor; ser 63.5 26 0.00088 31.3 8.1 64 42-108 117-183 (627)
47 4g9s_B Inhibitor of G-type lys 62.8 32 0.0011 23.1 7.8 65 31-108 26-93 (111)
48 2k8e_A UPF0339 protein YEGP; p 59.2 32 0.0011 24.1 6.3 60 43-109 14-91 (130)
49 1jcd_A Major outer membrane li 58.7 25 0.00084 20.5 5.3 44 133-176 4-47 (52)
50 1wlh_A Gelation factor; ABP-12 57.9 19 0.00065 28.8 5.8 45 64-108 142-189 (311)
51 3cu7_A Complement C5; Mg domai 57.3 52 0.0018 33.0 9.7 64 42-108 137-207 (1676)
52 2j3s_A Filamin-A; cytoskeleton 56.7 9.9 0.00034 30.3 3.8 44 65-108 131-177 (288)
53 1qle_D Cytochrome AA3, ccytoch 55.7 25 0.00085 19.6 4.3 29 166-194 13-41 (43)
54 2b39_A C3; thioester, immune d 55.0 75 0.0026 31.8 10.4 63 42-107 140-210 (1661)
55 1gl2_D Syntaxin 8, vesicle tra 53.5 34 0.0012 20.5 5.3 46 132-177 8-53 (65)
56 3jqw_A COLH protein, collagena 52.6 54 0.0018 22.5 11.0 76 31-118 37-115 (121)
57 1qfh_A Protein (gelation facto 52.6 25 0.00084 26.4 5.3 45 64-108 43-90 (212)
58 1m56_D Cytochrome C oxidase; m 52.0 33 0.0011 19.9 4.8 29 166-194 21-49 (51)
59 3prx_B Cobra venom factor; imm 49.4 95 0.0033 31.2 10.0 45 64-108 158-205 (1642)
60 2nps_D Syntaxin-6; vesicle fus 48.2 49 0.0017 20.9 6.4 46 132-177 18-63 (82)
61 2x5p_A FBA2, fibronectin bindi 46.6 26 0.00088 24.2 4.1 52 65-118 43-97 (121)
62 3afg_A Subtilisin-like serine 44.9 87 0.003 27.2 8.2 56 64-120 458-515 (539)
63 2j3s_A Filamin-A; cytoskeleton 42.5 71 0.0024 25.1 6.8 44 64-108 227-272 (288)
64 4acq_A Alpha-2-macroglobulin; 41.8 1.9E+02 0.0065 28.6 10.8 64 42-108 117-188 (1451)
65 3fn2_A Putative sensor histidi 40.0 41 0.0014 22.5 4.0 39 67-105 50-91 (106)
66 3c75_A Amicyanin; copper prote 38.1 95 0.0033 21.3 7.0 16 87-102 102-117 (132)
67 1n7s_D SNAP-25A; neuronal snar 36.2 69 0.0024 19.1 5.0 46 132-177 9-54 (66)
68 1sfc_D Protein (SNAP-25B), pro 36.1 79 0.0027 20.2 5.0 45 133-177 29-73 (87)
69 3isy_A Bsupi, intracellular pr 34.7 1.1E+02 0.0038 21.0 7.2 40 43-83 17-60 (120)
70 3e8v_A Possible transglutamina 33.2 82 0.0028 20.1 4.6 41 64-104 17-67 (82)
71 3hd7_A Vesicle-associated memb 29.3 1.2E+02 0.004 19.6 9.4 31 150-181 36-66 (91)
72 1nqj_A Class 1 collagenase; be 29.1 1.4E+02 0.0047 20.4 9.5 74 31-118 39-117 (119)
73 2lsj_B DNA polymerase kappa; R 34.6 12 0.00041 18.3 0.0 11 198-208 5-15 (26)
74 2pnv_A Small conductance calci 27.0 85 0.0029 17.4 3.4 19 137-155 20-38 (43)
75 2yko_A LINE-1 ORF1P; RNA-bindi 26.0 1.8E+02 0.0061 22.5 6.2 26 133-158 6-31 (233)
76 2knc_A Integrin alpha-IIB; tra 25.8 1E+02 0.0036 17.9 4.6 24 186-209 22-45 (54)
77 2k49_A UPF0339 protein SO_3888 24.9 1.7E+02 0.0057 20.0 5.3 50 51-106 5-72 (118)
78 2l8s_A Integrin alpha-1; trans 24.2 1.1E+02 0.0039 17.8 4.4 23 186-208 19-41 (54)
79 1wmd_A Protease; alpha-beta hy 24.0 87 0.003 26.2 4.6 43 65-107 366-419 (434)
80 3v1a_A Computational design, M 23.9 34 0.0012 19.6 1.3 17 195-211 9-25 (48)
81 3bid_A UPF0339 protein NMB1088 23.6 1.3E+02 0.0044 18.1 4.3 20 64-83 10-29 (64)
82 1z65_A PRPLP, prion-like prote 23.6 80 0.0027 15.9 2.5 18 1-18 1-18 (30)
83 1kd8_B GABH BLL, GCN4 acid bas 22.8 95 0.0033 16.4 3.9 24 135-158 3-26 (36)
84 1l4a_D S-SNAP25 fusion protein 22.6 1.1E+02 0.0038 19.5 3.9 45 133-177 30-74 (87)
85 3ogl_Q JAZ1 incomplete degron 22.3 29 0.00098 16.2 0.7 11 198-208 9-19 (21)
86 3kpt_A Collagen adhesion prote 20.7 1E+02 0.0036 25.1 4.3 41 65-105 267-313 (355)
No 1
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=94.95 E-value=0.41 Score=40.36 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=28.8
Q ss_pred EEEEEcCCceeeEEEEEcCCC--CCeEEEEEEEEcc
Q 028178 89 KFVFKAPRSGMYQFCFHNPTS--TPEEVSFYIHIGH 122 (212)
Q Consensus 89 ~~~f~~~~~G~y~~Cf~n~~~--~~~~V~f~i~~g~ 122 (212)
.=++++.++|.|.++|+|+.| ..|+|.+.+.+..
T Consensus 350 ~G~~~~~~~G~y~l~fdNs~S~~~~k~l~y~v~v~~ 385 (403)
T 1olm_A 350 DGTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLL 385 (403)
T ss_dssp EEEEECCSCEEEEEEEECTTCCCCSEEEEEEEEEEC
T ss_pred cCEEEcCCCeEEEEEEeccccceeceEEEEEEEEeC
Confidence 345789999999999999998 4799999988854
No 2
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=93.14 E-value=1.2 Score=29.63 Aligned_cols=65 Identities=15% Similarity=0.187 Sum_probs=41.6
Q ss_pred CCCEEEEeEEEEEeCccccCCCCCceeEEEEcCCCceeeeeec--ccCCEE--EEEc---CCceeeEEEEEcCC
Q 028178 42 KEDTITGNVFVTTDHELFWNSDHPGIDFTVTCPDGSIVRALKG--TSGDKF--VFKA---PRSGMYQFCFHNPT 108 (212)
Q Consensus 42 ~~~~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~~~--~~~g~~--~f~~---~~~G~y~~Cf~n~~ 108 (212)
+|++|.+. .-+.+.+..+ .....+.+.|.||+|+.+.+... ...|.+ .|.. ...|.|++......
T Consensus 15 PGetV~~~-~~~~~~~~~p-~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~~ 86 (102)
T 2p9r_A 15 PGQTVKFR-VVSMDENFHP-LNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKS 86 (102)
T ss_dssp TTCEEEEE-EEEECGGGCB-CCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTT
T ss_pred CCCEEEEE-EEEECCCCcC-CCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEECC
Confidence 57888877 5455543211 12333789999999999887432 234644 4444 34699999998754
No 3
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=92.91 E-value=0.31 Score=32.48 Aligned_cols=46 Identities=13% Similarity=0.204 Sum_probs=34.1
Q ss_pred CCceeEEEEcCCCceeeee-ecccCC--EEEEEcCCceeeEEEEEcCCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGD--KFVFKAPRSGMYQFCFHNPTS 109 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~ 109 (212)
..++.+.|.+|+|..+.-. .+...| ...|++.+.|.|.+++.-...
T Consensus 21 ~~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~g~ 69 (93)
T 2d7n_A 21 KGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGN 69 (93)
T ss_dssp SSCEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEESSS
T ss_pred CCCEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEECCE
Confidence 4569999999999865432 223445 567889999999999986554
No 4
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.72 E-value=0.28 Score=32.92 Aligned_cols=47 Identities=13% Similarity=0.147 Sum_probs=34.5
Q ss_pred CCCceeEEEEcCCCceeeee-ecccCC--EEEEEcCCceeeEEEEEcCCC
Q 028178 63 DHPGIDFTVTCPDGSIVRAL-KGTSGD--KFVFKAPRSGMYQFCFHNPTS 109 (212)
Q Consensus 63 ~~~~i~~~v~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~ 109 (212)
...++.+.|.+|+|..+.-. .+...| ...|++.+.|.|.+++.-...
T Consensus 28 g~~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~G~ 77 (95)
T 2ee9_A 28 RKGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGS 77 (95)
T ss_dssp CTTSEEEEEECTTSCEECCEEEECSSSCEEEECCCCSSEEEEEEEEESSC
T ss_pred CCCCEEEEEECCCCCccccEEEeCCCCeEEEEEEecCCEeEEEEEEECCE
Confidence 35679999999999765543 223445 466789999999999986553
No 5
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=91.15 E-value=1.1 Score=30.79 Aligned_cols=54 Identities=17% Similarity=0.203 Sum_probs=37.2
Q ss_pred EEEEeCccccCCCCCceeEEEEcCCCceeeeee-cccCC--EEEEEcCCceeeEEEEEcCCC
Q 028178 51 FVTTDHELFWNSDHPGIDFTVTCPDGSIVRALK-GTSGD--KFVFKAPRSGMYQFCFHNPTS 109 (212)
Q Consensus 51 y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~~-~~~~g--~~~f~~~~~G~y~~Cf~n~~~ 109 (212)
|.|...+ .+..+.+.|.+|+|..+.-.. ....| ...|++++.|.|.+.+.-...
T Consensus 32 F~V~~~~-----a~g~l~v~V~~P~g~~~~~~v~d~~~gty~v~ytP~~~G~h~v~V~~~g~ 88 (112)
T 2d7p_A 32 FAVQLNG-----ARGVIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGA 88 (112)
T ss_dssp EEEECTT-----CCSCEEEEEECSSSCBCCCEECSCBTTEEEEEECCSSCEEEEEEEEESSC
T ss_pred EEEEeCC-----CCCCEEEEEECCCCCeeeeEEEeCCCCeEEEEEEcCCCEeEEEEEEECCe
Confidence 5565544 235799999999997655432 23445 456889999999998885543
No 6
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=90.65 E-value=1.5 Score=30.59 Aligned_cols=47 Identities=19% Similarity=0.273 Sum_probs=34.0
Q ss_pred CCCceeEEEEcCCCceeeee-ecccCC--EEEEEcCCceeeEEEEEcCCC
Q 028178 63 DHPGIDFTVTCPDGSIVRAL-KGTSGD--KFVFKAPRSGMYQFCFHNPTS 109 (212)
Q Consensus 63 ~~~~i~~~v~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~ 109 (212)
....+.+.|.+|+|..+.-+ .+...| ...|++.+.|.|.+++.-...
T Consensus 41 G~~~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~g~ 90 (124)
T 2dmb_A 41 GKGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGV 90 (124)
T ss_dssp CSCCEEEEEECTTSCBCCCEEEECTTSCEEEEEECSSCEEEEEEEEESSC
T ss_pred CCCcEEEEEECCCCCEEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEECCE
Confidence 35679999999998655433 223445 467889999999999985543
No 7
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=90.32 E-value=1.6 Score=29.92 Aligned_cols=46 Identities=13% Similarity=0.206 Sum_probs=33.2
Q ss_pred CCceeEEEEcCCCceeeee-ecccCC--EEEEEcCCceeeEEEEEcCCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGD--KFVFKAPRSGMYQFCFHNPTS 109 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~ 109 (212)
...+.+.|.+|+|..+... .+...| ..+|++.+.|.|.+.+.-...
T Consensus 43 ~~~l~V~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~ 91 (115)
T 2d7m_A 43 EGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGD 91 (115)
T ss_dssp SSCEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEEEESSC
T ss_pred CCEEEEEEECCCCCeeeeEEEECCCCEEEEEEEeCCCceEEEEEEECCE
Confidence 4569999999998655433 223445 456889999999999986543
No 8
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=89.91 E-value=2.3 Score=28.31 Aligned_cols=45 Identities=7% Similarity=0.153 Sum_probs=31.5
Q ss_pred CCceeEEEEcCCCceeeee-ecccCCE--EEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGDK--FVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|+|..+.-+ .+...|. .+|++...|.|.+.+.-..
T Consensus 38 ~~~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~p~~~G~y~i~V~~~g 85 (100)
T 3rgh_A 38 SAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGG 85 (100)
T ss_dssp SCCEEEEEECTTSCBCEEEEEECSSSEEEEEEECCSSEEEEEEEEETT
T ss_pred CceEEEEEECCCCCEeEEEEEeCCCCEEEEEEEeCCCeeEEEEEEECC
Confidence 4579999999998655433 2334454 5688899999988876443
No 9
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=89.42 E-value=2 Score=27.82 Aligned_cols=45 Identities=13% Similarity=0.097 Sum_probs=31.4
Q ss_pred CCceeEEEEcCCCceeeee-ecccCCE--EEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGDK--FVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|+|..+.-+ .+...|. .+|++.++|.|.+.+.-..
T Consensus 29 ~~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 76 (89)
T 3cnk_A 29 NNMLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGH 76 (89)
T ss_dssp SCCEEEEEECSSSCCSEEEEEEEETTEEEEEEECCSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCceeEEEEECCCCEEEEEEEECCCccEEEEEEECC
Confidence 4568999999998643222 2334564 5688999999999888544
No 10
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=88.84 E-value=2.2 Score=28.84 Aligned_cols=46 Identities=11% Similarity=0.217 Sum_probs=32.9
Q ss_pred CCCceeEEEEcCCCceeeee-ecccCCE--EEEEcCCceeeEEEEEcCC
Q 028178 63 DHPGIDFTVTCPDGSIVRAL-KGTSGDK--FVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 63 ~~~~i~~~v~~p~g~~v~~~-~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 108 (212)
....+.+.|.+|+|..+.-+ .+...|. .+|++.+.|.|.+.+.-..
T Consensus 41 G~~~l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 89 (108)
T 2dj4_A 41 GLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYAD 89 (108)
T ss_dssp CSCCEEEEEECSSSCEECCCCEECSSSEEEEEECCSSCEEEEEEEEESS
T ss_pred CCceEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCeeEEEEEEECC
Confidence 35679999999999654432 2334564 5678899999999988554
No 11
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.46 E-value=2.5 Score=28.43 Aligned_cols=44 Identities=14% Similarity=0.290 Sum_probs=33.1
Q ss_pred CCceeEEEEcCCCceeeeeecccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|.+..+ +-.+...| ..+|++..+|.|.+.+.-..
T Consensus 41 ~~~l~v~v~~p~~~~v-~v~d~~dGty~v~Y~p~~~G~y~I~V~~~g 86 (105)
T 2ee6_A 41 AGGLSIAVEGPSKAEI-TFDDHKNGSCGVSYIAQEPGNYEVSIKFND 86 (105)
T ss_dssp CCCEEEEEESSSCEEE-EECCCCSSCCCEEEEESSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCEE-EEEECCCCEEEEEEEECCCceEEEEEEECC
Confidence 4679999999998655 32334455 57899999999999998544
No 12
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=88.34 E-value=2 Score=29.61 Aligned_cols=66 Identities=17% Similarity=0.112 Sum_probs=45.2
Q ss_pred CcceEEEecCCCCCEEEEeEEEEEeCccccCCCCCceeEEEEcCCCce---eeeeecccCCEEEEEcCCceeeEEEEEcC
Q 028178 31 DTECVYEHVIYKEDTITGNVFVTTDHELFWNSDHPGIDFTVTCPDGSI---VRALKGTSGDKFVFKAPRSGMYQFCFHNP 107 (212)
Q Consensus 31 ~~~Cf~e~v~~~~~~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p~g~~---v~~~~~~~~g~~~f~~~~~G~y~~Cf~n~ 107 (212)
+...+...+. .|+.+.+. . +. +..+.+.|.+|+++. ++.......+.++-+.+.+|.|++=+...
T Consensus 28 ~~~~Y~~~a~-aGQ~l~V~-l---s~-------~~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 28 DTIHYTLVAX-AGQTMTVX-I---GG-------SSNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp CCEEEECCC--CCCEEEC--C---EE-------STTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEECC
T ss_pred CceEEEEEec-CCCEEEEE-e---CC-------CCcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEec
Confidence 3467777777 48888877 3 22 345888999999874 34443334458888999999999999987
Q ss_pred C
Q 028178 108 T 108 (212)
Q Consensus 108 ~ 108 (212)
.
T Consensus 96 r 96 (114)
T 4dzg_A 96 R 96 (114)
T ss_dssp H
T ss_pred c
Confidence 4
No 13
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=88.22 E-value=0.81 Score=30.93 Aligned_cols=46 Identities=15% Similarity=0.206 Sum_probs=33.8
Q ss_pred CCceeEEEEcCCCceeeee-ecccCCE--EEEEcCCceeeEEEEEcCCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGDK--FVFKAPRSGMYQFCFHNPTS 109 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g~--~~f~~~~~G~y~~Cf~n~~~ 109 (212)
..++.+.|.+|+|..+.-. .+...|. .+|++.+.|.|.+.+.-...
T Consensus 30 ~~~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP~e~G~h~v~V~~~g~ 78 (102)
T 2dlg_A 30 SSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQ 78 (102)
T ss_dssp GGGCEEEEECTTSCEEECEEEECSSSEEEEEBCCCTTCEEEEEEESSSS
T ss_pred CCCEEEEEECCCCCEeeeEEEECCCCEEEEEEEecCCEeEEEEEEECCE
Confidence 4579999999999765543 2334454 56789999999999986553
No 14
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=86.87 E-value=4.1 Score=26.71 Aligned_cols=45 Identities=11% Similarity=0.097 Sum_probs=31.2
Q ss_pred CCceeEEEEcCCCceeee-eecccCCE--EEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRA-LKGTSGDK--FVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~-~~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|+|..+.- -.+...|. .+|++.+.|.|.+.+.-..
T Consensus 36 ~~~l~v~v~~p~~~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 83 (96)
T 1v05_A 36 TNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGD 83 (96)
T ss_dssp SCCEEEEEECSSSCCSEEEEEECSTTEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCeeEEEEEeCCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 456899999999854321 12334564 5688999999999888544
No 15
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.33 E-value=1.7 Score=30.01 Aligned_cols=45 Identities=13% Similarity=0.217 Sum_probs=32.1
Q ss_pred CCceeEEEEcCCCceeeee-ecccCCE--EEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGDK--FVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|+|..+.-+ .+...|. .+|++.+.|.|.+.+.-..
T Consensus 53 ~~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 100 (119)
T 2e9j_A 53 EGLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGG 100 (119)
T ss_dssp CCCEECCEECTTCCCCCEEEEECCSSEEEEEECCCSCSEEEECCEESS
T ss_pred CCeEEEEEECCCCCEEEEEEEECCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 5679999999998654433 2234564 5678899999999888554
No 16
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=86.28 E-value=4.6 Score=27.04 Aligned_cols=44 Identities=16% Similarity=0.175 Sum_probs=31.8
Q ss_pred CCceeEEEEcCCCceeeeeecccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
..++.+.|.+|.+..+.-. +...| ..+|++..+|.|.+.+.-..
T Consensus 41 ~g~l~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~g 86 (105)
T 2dic_A 41 IGGLGITVEGPSESKINCR-DNKDGSCSAEYIPFAPGDYDVNITYGG 86 (105)
T ss_dssp SSCEEEEEESSSCCCCEEE-ECSSSCEEEEECCSSCEEEEEEEEETT
T ss_pred CCceEEEEECCCCCeEEEE-ECCCCeEEEEEEeCCCeEEEEEEEECC
Confidence 4568899999987554332 23455 56788999999999988544
No 17
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=85.95 E-value=4.3 Score=27.59 Aligned_cols=45 Identities=9% Similarity=0.225 Sum_probs=32.8
Q ss_pred CCceeEEEEcCCCceeeee-ecccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|+|..+.-. .+...| ..+|++...|.|.+.+.-..
T Consensus 41 ~~~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 88 (113)
T 2dia_A 41 PGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGG 88 (113)
T ss_dssp SCCEEEEEEETTTEECEEEEEECTTSEEEEEEECSSCEEEEEEEEETT
T ss_pred CccEEEEEECCCCCEeeEEEEECCCCEEEEEEEeCCCccEEEEEEECC
Confidence 4679999999988655443 233456 45688999999999998654
No 18
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=85.65 E-value=5.6 Score=25.96 Aligned_cols=44 Identities=11% Similarity=0.230 Sum_probs=31.6
Q ss_pred CCceeEEEEcCCCceeeeeecccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|.+..+.- .+...| ..+|++..+|.|.+.+.-..
T Consensus 33 ~~~~~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g 78 (94)
T 2w0p_A 33 AGGLAIAVEGPSKAEISF-EDRKDGSCGVAYVVQEPGDYEVSVKFNE 78 (94)
T ss_dssp SCCEEEEEEESSCCEEEE-EECTTSCEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCeEEE-EECCCCEEEEEEEECCCceEEEEEEECC
Confidence 456888999998854432 233445 46788999999999988544
No 19
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.57 E-value=5.2 Score=27.27 Aligned_cols=44 Identities=11% Similarity=0.255 Sum_probs=32.2
Q ss_pred CCceeEEEEcCCCceeeeeecccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|++..+. -.+...| ..+|++.++|.|.+.+.-..
T Consensus 51 ~~~l~v~v~~p~~~~~~-v~d~~dGty~v~Y~p~~~G~y~I~V~~~g 96 (115)
T 2eea_A 51 EGGLDLAIEGPSKAEIS-CIDNKDGTCTVTYLPTLPGDYSILVKYND 96 (115)
T ss_dssp SSCEEEEEESSSCCEEC-CBCCSSSEEEEEEECSSCSCEEEEEEESS
T ss_pred CCceEEEEECCCCceEE-EEECCCCEEEEEEEeCCCeeEEEEEEECC
Confidence 46799999999985442 2334556 46788999999999888544
No 20
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=84.73 E-value=1.1 Score=30.93 Aligned_cols=46 Identities=13% Similarity=0.189 Sum_probs=33.9
Q ss_pred CCceeEEEEcCCCceeeee-ecccCC--EEEEEcCCceeeEEEEEcCCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGD--KFVFKAPRSGMYQFCFHNPTS 109 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~ 109 (212)
...+.+.|.+|+|..+-.. .....| ..+|++.+.|.|.+.+.-...
T Consensus 44 ~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~e~G~h~v~V~~~g~ 92 (116)
T 2dmc_A 44 LSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGN 92 (116)
T ss_dssp STTBCCEEECTTSCBCCEEEEEETTTEEEEEECCCSCEEEEEECBBSSS
T ss_pred CCCEEEEEECCCCCEEeeEEEeCCCCeEEEEEEeCCCeeEEEEEEECCE
Confidence 4579999999999755433 223455 457899999999999986553
No 21
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=83.31 E-value=5.4 Score=28.36 Aligned_cols=44 Identities=9% Similarity=0.160 Sum_probs=31.5
Q ss_pred CCceeEEEEcCCCceeeeeecccCC-EEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGD-KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g-~~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|++..+.-.. ..+| ..+|++.++|.|.+.+.-..
T Consensus 75 ~g~l~v~I~gPs~~~~~~~d-~~dGy~V~YtP~~~G~y~I~Vk~~g 119 (138)
T 2nqc_A 75 SGALSVTIDGPSKVQLDCRE-CPEGHVVTYTPMAPGNYLIAIKYGG 119 (138)
T ss_dssp SCCEEEEEESSSCCEEEEEE-ETTEEEEEEECCSCEEEEEEEEESS
T ss_pred CCcEEEEEECCCCCeeeEEE-CCCcEEEEEEcCCCEEEEEEEEECC
Confidence 45699999999986554332 3344 45688999999998887444
No 22
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=83.07 E-value=6.1 Score=25.92 Aligned_cols=44 Identities=9% Similarity=0.233 Sum_probs=31.0
Q ss_pred CCceeEEEEcCCCceeeeeecccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|.+..+.- .+...| ..+|++.++|.|.+.+.-..
T Consensus 36 ~~~l~v~v~~p~~~~~~v-~d~~dGty~v~Y~p~~~G~y~i~V~~~g 81 (97)
T 2bp3_A 36 EGGLSLAIEGPSKAEISC-TDNQDGTCSVSYLPVLPGDYSILVKYNE 81 (97)
T ss_dssp SEEEEEEEEESSCCEEEE-EECSSSEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCEEEE-EECCCCEEEEEEEeCCCCcEEEEEEECC
Confidence 456888899998754432 233456 46788999999999988543
No 23
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=82.98 E-value=7.5 Score=26.62 Aligned_cols=44 Identities=11% Similarity=0.265 Sum_probs=31.7
Q ss_pred CCceeEEEEcCCCceeeeeecccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|.+-.+. -.+...| ..+|++.++|.|.+.+.-..
T Consensus 48 ~~~l~v~v~~p~~~~~~-v~d~~dGty~v~Y~p~~~G~y~I~V~~~g 93 (119)
T 2k9u_A 48 AGGLSIAVEGPSKAEIA-FEDRKDGSCGVSYVVQEPGDYEVSIKFND 93 (119)
T ss_dssp SEEEEEEEESSSCCEEE-EECCSSSEEEEEEECCSSEEEEEEEEETS
T ss_pred CCcEEEEEeCCCCCeEE-EEECCCCEEEEEEEECCCceEEEEEEECC
Confidence 45689999999884332 2334556 46788999999999998554
No 24
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=80.24 E-value=9.7 Score=25.89 Aligned_cols=45 Identities=9% Similarity=0.093 Sum_probs=33.9
Q ss_pred CCceeEEEE-cCCCceeeeeecccC--CEEEEEc--CCceeeEEEEEcCC
Q 028178 64 HPGIDFTVT-CPDGSIVRALKGTSG--DKFVFKA--PRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~-~p~g~~v~~~~~~~~--g~~~f~~--~~~G~y~~Cf~n~~ 108 (212)
..++.+.|+ +.+|+++|++.-... ..+.+.. ..+|.|.+=+.+..
T Consensus 48 ~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~~ 97 (108)
T 3d33_A 48 DRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGTP 97 (108)
T ss_dssp CSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEES
T ss_pred CCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeCC
Confidence 467999999 788999998754333 4555554 57899999998873
No 25
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.12 E-value=9.8 Score=26.41 Aligned_cols=53 Identities=13% Similarity=0.195 Sum_probs=35.5
Q ss_pred EEEEeCccccCCCCCceeEEEEcCCCceeeeeecccCC-EEEEEcCCceeeEEEEEcCC
Q 028178 51 FVTTDHELFWNSDHPGIDFTVTCPDGSIVRALKGTSGD-KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 51 y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~~~~~~g-~~~f~~~~~G~y~~Cf~n~~ 108 (212)
|.+...+. ....+.+.|.+|++..+--. +..+| ...|++.++|.|.+.+.-..
T Consensus 42 F~v~t~da----G~~~l~v~i~gp~~~~~~~~-d~~dGy~V~Y~P~~~G~y~I~V~~~g 95 (125)
T 2eec_A 42 FFINTTRA----GPGTLSVTIEGPSKVKMDCQ-ETPEGYKVMYTPMAPGNYLISVKYGG 95 (125)
T ss_dssp EEEECTTT----CSCCEEEEEESSSCCCCEEE-ECSSSEEEEECCSSCEEEEEEEEESS
T ss_pred EEEEEcCC----CCCcEEEEEECCCCCcceeE-ECCCCEEEEEEcCCCeEEEEEEEECC
Confidence 44555432 34679999999998654333 23455 45678899999998888544
No 26
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=78.21 E-value=12 Score=27.73 Aligned_cols=44 Identities=9% Similarity=0.233 Sum_probs=32.5
Q ss_pred CCceeEEEEcCCCceeeeeecccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|.+..+.- .+...| ..+|++..+|.|.+++.-..
T Consensus 127 ~g~l~v~I~gp~~~~~~~-~d~~dGty~v~Y~p~~~G~y~i~V~~~g 172 (188)
T 2k7p_A 127 EGGLSLAIEGPSKAEISC-TDNQDGTCSVSYLPVLPGDYSILVKYNE 172 (188)
T ss_dssp SSCEEEEEECSSCCEEEE-EECTTSEEEEEEECCSSEEEEEEEEETT
T ss_pred CCCeEEEEeCCCCCeEEE-EECCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 456899999998755432 334556 56788999999999998544
No 27
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.03 E-value=8.7 Score=25.70 Aligned_cols=45 Identities=16% Similarity=0.251 Sum_probs=30.7
Q ss_pred CCceeEEEEcCCC--ceee-eeecccCCE--EEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDG--SIVR-ALKGTSGDK--FVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g--~~v~-~~~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|++ ..+. +-.+...|. .+|++.+.|.|.+++.-..
T Consensus 48 g~~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~~g 97 (113)
T 2ds4_A 48 GDNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKE 97 (113)
T ss_dssp CCCEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEEESS
T ss_pred CceEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEECC
Confidence 3468999999986 3322 223344564 5688999999999988554
No 28
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=77.53 E-value=2.5 Score=29.45 Aligned_cols=46 Identities=9% Similarity=0.141 Sum_probs=33.1
Q ss_pred CCceeEEEEcCCCceeeee-ecccCCE--EEEEcCCceeeEEEEEcCCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGDK--FVFKAPRSGMYQFCFHNPTS 109 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g~--~~f~~~~~G~y~~Cf~n~~~ 109 (212)
...+.+.|.+|+|..+.-. .+...|. ..|++.+.|.|++.+.-...
T Consensus 56 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~~~i~V~~~g~ 104 (128)
T 2dib_A 56 GDHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDV 104 (128)
T ss_dssp CSCCCEECCCSSSCCCCCEEEECSSSEEEEEECCSSCSEEEEEEBSSSC
T ss_pred CccEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCEeEEEEEEECCE
Confidence 4568999999998654432 2334564 56889999999999986553
No 29
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=77.05 E-value=21 Score=31.60 Aligned_cols=66 Identities=14% Similarity=0.151 Sum_probs=42.9
Q ss_pred CCCCCEEEEeEEEEEeCccccCCCCCceeEEEEcCCCceeeeeec-ccCCEE--EEEc---CCceeeEEEEEcCC
Q 028178 40 IYKEDTITGNVFVTTDHELFWNSDHPGIDFTVTCPDGSIVRALKG-TSGDKF--VFKA---PRSGMYQFCFHNPT 108 (212)
Q Consensus 40 ~~~~~~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~~~-~~~g~~--~f~~---~~~G~y~~Cf~n~~ 108 (212)
-++|++|.+. .-+.+.+.. +.+..+.+.|.||+|+.+.++.. ...|-+ .|.. ...|.|++-+....
T Consensus 131 YrPGqtV~~r-~i~~d~~~~--p~~~~~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~~ 202 (656)
T 4fxk_A 131 YNPGQRVRYR-VFALDQKMR--PSTDTITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFSD 202 (656)
T ss_dssp ECTTCEEEEE-EEEECSSSS--BCCCCEEEEEECTTCCEEEEEEECCTTSEEEEEEECCTTCCSEEEEEEEEESS
T ss_pred cCCCCEEEEE-EEEECCccC--cCcccceEEEECCCCcEEeeeEEecCCceEEEEecCCCCCCCcCEEEEEEEcC
Confidence 3467888877 445554322 13456899999999999876532 234644 4443 34599999997543
No 30
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=76.47 E-value=6.5 Score=26.63 Aligned_cols=44 Identities=14% Similarity=0.262 Sum_probs=31.4
Q ss_pred CCceeEEEEcCCCceeeeeecccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|.+..+. -.+...| ...|++.++|.|.+.+.-..
T Consensus 41 ~~~l~v~v~gp~~~~~~-v~d~~dGty~V~Y~p~~~G~y~I~V~~~g 86 (111)
T 2d7o_A 41 EGGLSLAVEGPSKAEIT-CKDNKDGTCTVSYLPTAPGDYSIIVRFDD 86 (111)
T ss_dssp SSCBCCEEESSSCCCBC-CCCCSSSEEEEEECCSSCEEEEEECBBSS
T ss_pred CCcEEEEEECCCCceEE-EEECCCCEEEEEEEeCCCeEEEEEEEECC
Confidence 45688899999875442 2334556 45688999999999998554
No 31
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=76.46 E-value=6 Score=29.53 Aligned_cols=45 Identities=11% Similarity=0.232 Sum_probs=33.6
Q ss_pred CCceeEEEEcCCCceeeee-ecccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
..++.+.|.+|+|+...-. .+...| ...|++.+.|.|++.+.-..
T Consensus 33 ~~~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~g 80 (188)
T 2k7p_A 33 KGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDN 80 (188)
T ss_dssp SSCEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEETT
T ss_pred CceEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEECC
Confidence 4569999999999875432 223456 45688999999999998664
No 32
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=75.30 E-value=9.8 Score=26.84 Aligned_cols=55 Identities=15% Similarity=0.216 Sum_probs=37.8
Q ss_pred EEEEeEEEEEeCccccCCCCCceeEEEEcCCCceeeeee--cccCCEEEEEcC---------CceeeEEEEEcC
Q 028178 45 TITGNVFVTTDHELFWNSDHPGIDFTVTCPDGSIVRALK--GTSGDKFVFKAP---------RSGMYQFCFHNP 107 (212)
Q Consensus 45 ~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~~--~~~~g~~~f~~~---------~~G~y~~Cf~n~ 107 (212)
.+.+. |.+... ...+.+.|+|.+|+++..-. ..+.|.+.|... .+|.|.+-+.-.
T Consensus 25 ~~~~~-~~l~~~-------a~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a~ 90 (138)
T 3osv_A 25 TFKAS-LNLPVS-------SSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTS 90 (138)
T ss_dssp CEEEE-EEESBC-------EEEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred eEEEE-EECCCC-------CcEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEEE
Confidence 45666 666432 24699999999999998743 345676666542 368999988654
No 33
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=75.25 E-value=11 Score=31.10 Aligned_cols=45 Identities=11% Similarity=0.134 Sum_probs=32.5
Q ss_pred CCceeEEEEcCCCceeeee---ecccCCE--EEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL---KGTSGDK--FVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~---~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|+|..+--. .+...|. .+|++.++|.|.+-+.-..
T Consensus 286 ~g~l~v~V~~P~G~~~~~~v~~~~~~~gty~v~y~P~~~G~~~I~V~~~g 335 (347)
T 4b7l_A 286 QGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYLPKVTGLHKVTVLFAG 335 (347)
T ss_dssp SCCEEEEEECTTSCEEECEEEESSTTCSEEEEEECCCSSSEEEEEEEETT
T ss_pred CCceEEEEECCCCCeecCEEEEEcCCCCEEEEEEEECCCEeEEEEEEECC
Confidence 5679999999999765432 2233454 5688999999998877544
No 34
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=74.65 E-value=5.1 Score=34.19 Aligned_cols=45 Identities=20% Similarity=0.311 Sum_probs=38.7
Q ss_pred CCceeEEEEcCCCceeeeeecccCCEEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGDKFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g~~~f~~~~~G~y~~Cf~n~~ 108 (212)
-+++.|.+.+|+|.++....-...|.+.|.--.+|.|.+-|..+.
T Consensus 329 l~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P~ 373 (429)
T 3irp_X 329 AAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMPE 373 (429)
T ss_dssp CTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCCT
T ss_pred cCCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECCC
Confidence 356899999999998887777788999999889999999997654
No 35
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=74.39 E-value=16 Score=25.36 Aligned_cols=44 Identities=14% Similarity=0.233 Sum_probs=31.7
Q ss_pred CCceeEEEEcCCCceeeeeecccCCE--EEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGDK--FVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|.+..+.- .+...|. .+|++.++|.|.+.+.-..
T Consensus 61 ~~~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g 106 (131)
T 2di9_A 61 TGGLGLTVEGPCEAKIEC-SDNGDGTCSVSYLPTKPGEYFVNILFEE 106 (131)
T ss_dssp SSCEEEEECSSSCCEEEE-EECSSSEEEEEEECSSSSEEEEEEEESS
T ss_pred CCeeEEEEEecCCceEEE-EECCCCEEEEEEEeCCCeeEEEEEEECC
Confidence 456899999998854432 3344564 5688999999999988544
No 36
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=73.35 E-value=21 Score=25.04 Aligned_cols=43 Identities=19% Similarity=0.365 Sum_probs=31.9
Q ss_pred CceeEEEEcCCCceeeeee--cccCCEEEEEcC---------CceeeEEEEEcC
Q 028178 65 PGIDFTVTCPDGSIVRALK--GTSGDKFVFKAP---------RSGMYQFCFHNP 107 (212)
Q Consensus 65 ~~i~~~v~~p~g~~v~~~~--~~~~g~~~f~~~---------~~G~y~~Cf~n~ 107 (212)
..+.+.|+|.+|+++..-. ..+.|.+.|... .+|.|.+.+.-.
T Consensus 39 ~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a~ 92 (138)
T 3c12_A 39 GFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQT 92 (138)
T ss_dssp EEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred CEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEEE
Confidence 4699999999999998743 345666677642 368999999744
No 37
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=72.28 E-value=45 Score=29.59 Aligned_cols=65 Identities=14% Similarity=0.140 Sum_probs=42.8
Q ss_pred CCCCCEEEEeEEEEEeCccccCCCCCceeEEEEcCCCceeeeeecc---cCCEE--EEEcC---CceeeEEEEEcC
Q 028178 40 IYKEDTITGNVFVTTDHELFWNSDHPGIDFTVTCPDGSIVRALKGT---SGDKF--VFKAP---RSGMYQFCFHNP 107 (212)
Q Consensus 40 ~~~~~~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~~~~---~~g~~--~f~~~---~~G~y~~Cf~n~ 107 (212)
-++|++|.+. .-+.+.+..+ .+..+.+.|.||+|+.+.+..-. ..|.+ .|..+ ..|.|++-+...
T Consensus 117 YrPGqtV~~r-~i~~d~~~~p--~~~~v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 189 (645)
T 2hr0_A 117 YTPGSTVLYR-IFTVNHKLLP--VGRTVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYE 189 (645)
T ss_dssp CCTTSEEEEE-EEEECTTSCB--CCCEEEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEET
T ss_pred CCCCCEEEEE-EEEECCCCcc--cCceEEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEEC
Confidence 3467888877 5455543221 23468999999999999874332 45644 45443 469999999864
No 38
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=71.95 E-value=20 Score=24.20 Aligned_cols=20 Identities=15% Similarity=0.200 Sum_probs=10.7
Q ss_pred CCcchHHHHHHHHHHHHHHH
Q 028178 133 EHLDPIYVRIAELREALETV 152 (212)
Q Consensus 133 ~~~~~l~~~l~~l~~~l~~i 152 (212)
+++..++.++..|.+.+.++
T Consensus 21 ~eI~~Ie~~I~eL~~iF~dl 40 (109)
T 3hd7_B 21 SEIIKLENSIRELHDMFMDM 40 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34555666665555555444
No 39
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=71.31 E-value=9.4 Score=28.84 Aligned_cols=45 Identities=7% Similarity=0.061 Sum_probs=32.9
Q ss_pred CCceeEEEEcCCCceeeee-ecccCC--EEEEEcCCceeeEEEEEcCCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGD--KFVFKAPRSGMYQFCFHNPTS 109 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~ 109 (212)
...+.+.|.+|+| .+.-. .+...| ..+|++.+.|.|.+++.-...
T Consensus 134 ~~~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g~ 181 (212)
T 1qfh_A 134 GDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGK 181 (212)
T ss_dssp CCCEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEETTE
T ss_pred CCcEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECCE
Confidence 4569999999998 33222 344567 567889999999999986553
No 40
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=70.74 E-value=21 Score=23.99 Aligned_cols=44 Identities=16% Similarity=0.243 Sum_probs=31.0
Q ss_pred CCceeEEEEcCCCceeeeeecccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|.+-.+.- .+...| ...|++.++|.|.+.+.-..
T Consensus 41 ~g~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g 86 (111)
T 2di8_A 41 YGGISLAVEGPSKVDIQT-EDLEDGTCKVSYFPTVPGVYIVSTKFAD 86 (111)
T ss_dssp BCCEEEEEESSSCCCEEC-CBCTTSCEEEEECCCSCSEEEEEEEESS
T ss_pred CCceEEEEEcCCCceEEE-EECCCCEEEEEEEeCCCeEEEEEEEECC
Confidence 356889999998744422 233446 56788999999999888544
No 41
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=70.15 E-value=9.7 Score=28.32 Aligned_cols=46 Identities=20% Similarity=0.159 Sum_probs=33.7
Q ss_pred CCCceeEEEEcCCCceeeee-ecccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 63 DHPGIDFTVTCPDGSIVRAL-KGTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 63 ~~~~i~~~v~~p~g~~v~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
+...+.+.|.+|+|+.+.-. .....| ...|++.+.|.|.+-+....
T Consensus 29 ~~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~g 77 (191)
T 2k7q_A 29 DLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNG 77 (191)
T ss_dssp CSSSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEETT
T ss_pred CCCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEECC
Confidence 34579999999999765433 223445 46788999999998888765
No 42
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=66.80 E-value=13 Score=29.88 Aligned_cols=45 Identities=7% Similarity=0.061 Sum_probs=33.2
Q ss_pred CCceeEEEEcCCCceeeee-ecccCCE--EEEEcCCceeeEEEEEcCCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGDK--FVFKAPRSGMYQFCFHNPTS 109 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g~--~~f~~~~~G~y~~Cf~n~~~ 109 (212)
...+.+.|.+|+| .+.-. .+...|. .+|++.+.|.|.+++.-...
T Consensus 233 ~~~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~g~ 280 (311)
T 1wlh_A 233 GDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGK 280 (311)
T ss_dssp CSCEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEETTE
T ss_pred CCcEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEECCE
Confidence 3458999999999 44322 2445675 67889999999999996653
No 43
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=66.66 E-value=18 Score=26.75 Aligned_cols=44 Identities=9% Similarity=0.243 Sum_probs=31.2
Q ss_pred CCceeEEEEcCCCceeeeeecccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|.+..+.- .+...| ..+|++.++|.|.+++.-..
T Consensus 127 ~g~l~v~V~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~i~V~~~g 172 (191)
T 2k7q_A 127 YGGLSLSIEGPSKVDINT-EDLEDGTCRVTYCPTEPGNYIINIKFAD 172 (191)
T ss_dssp SEEEEEEEEESSCEEEEE-EECTTSCEEEEEEESSCEEEEEEEEETT
T ss_pred CCceEEEEECCCCceEEE-EECCCCEEEEEEEeCCCceEEEEEEECC
Confidence 345888888998754422 233456 57889999999999998554
No 44
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=65.84 E-value=40 Score=32.84 Aligned_cols=66 Identities=17% Similarity=0.237 Sum_probs=41.8
Q ss_pred CCCEEEEeEEEEEeCccccCCCCCceeEEEEcCCCceeeeeecc--cCCEE--EEEc---CCceeeEEEEEcCC
Q 028178 42 KEDTITGNVFVTTDHELFWNSDHPGIDFTVTCPDGSIVRALKGT--SGDKF--VFKA---PRSGMYQFCFHNPT 108 (212)
Q Consensus 42 ~~~~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~~~~--~~g~~--~f~~---~~~G~y~~Cf~n~~ 108 (212)
+|++|.+. --+.+.+..+......+.+.|.||+|+.+.++... ..|.+ +|.. ...|.|++=.....
T Consensus 113 PGqtV~~r-~~~~~~~~~p~~~~~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~~ 185 (1325)
T 2pn5_A 113 PGDTVNFR-VIVLDTELKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVEG 185 (1325)
T ss_dssp TTCEEEEE-EEEEETTSSCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEETT
T ss_pred CCCEEEEE-EEEecCCccccccCccEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeCC
Confidence 67888777 33444432111112358999999999999876543 45644 4443 34699999988643
No 45
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=63.89 E-value=30 Score=23.16 Aligned_cols=63 Identities=16% Similarity=0.153 Sum_probs=42.5
Q ss_pred cceEEEecCCCCCEEEEeEEEEEeCccccCCCCCceeEEEEcC-CCceeeeeecccCCEEEEE--cCCceeeEEEEEcCC
Q 028178 32 TECVYEHVIYKEDTITGNVFVTTDHELFWNSDHPGIDFTVTCP-DGSIVRALKGTSGDKFVFK--APRSGMYQFCFHNPT 108 (212)
Q Consensus 32 ~~Cf~e~v~~~~~~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p-~g~~v~~~~~~~~g~~~f~--~~~~G~y~~Cf~n~~ 108 (212)
++|-+. .| .+.+. |.- .-+.+.+.|.+. +|+.+|+.....-...++. .+.+|+|.+=+....
T Consensus 27 ~~~A~I----~n-vlsV~-F~~---------~~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI~~~~ 91 (101)
T 3sd2_A 27 EKCAIL----SN-ILNVS-FGR---------AKDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHIILND 91 (101)
T ss_dssp EEEEEE----TT-EEEEE-ESS---------CCSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEEEETT
T ss_pred cccEEE----eC-EEEEE-ecc---------CCCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEEEeCC
Confidence 456665 35 66666 531 245799999986 7999998765444455554 566899998776654
Q ss_pred C
Q 028178 109 S 109 (212)
Q Consensus 109 ~ 109 (212)
.
T Consensus 92 ~ 92 (101)
T 3sd2_A 92 C 92 (101)
T ss_dssp E
T ss_pred c
Confidence 3
No 46
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=63.54 E-value=26 Score=31.29 Aligned_cols=64 Identities=9% Similarity=0.089 Sum_probs=36.5
Q ss_pred CCCEEEEeEEEEEeCccccCCCCCceeEEEEcCCCceeeeeeccc--CCEEEEEc-CCceeeEEEEEcCC
Q 028178 42 KEDTITGNVFVTTDHELFWNSDHPGIDFTVTCPDGSIVRALKGTS--GDKFVFKA-PRSGMYQFCFHNPT 108 (212)
Q Consensus 42 ~~~~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~~~~~--~g~~~f~~-~~~G~y~~Cf~n~~ 108 (212)
+|+++.+. .-+.+.+. .+.+..+.+.|.||+|+.+..+.-.. ++.|.... ...|.|++......
T Consensus 117 PGqtV~~r-~i~~d~~~--~p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~~ 183 (627)
T 3hrz_A 117 PGSPVLYR-VFSMDHNT--SKMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEH 183 (627)
T ss_dssp TTCEECEE-EEESCC---------CEEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEETT
T ss_pred CCCEEEEE-EEEECCCC--cccCccEEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEECC
Confidence 56777766 33333321 11245689999999999998643222 22333322 34699999998543
No 47
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=62.75 E-value=32 Score=23.08 Aligned_cols=65 Identities=15% Similarity=0.124 Sum_probs=43.5
Q ss_pred CcceEEEecCCCCCEEEEeEEEEEeCccccCCCCCceeEEEEcCCCceeeee---ecccCCEEEEEcCCceeeEEEEEcC
Q 028178 31 DTECVYEHVIYKEDTITGNVFVTTDHELFWNSDHPGIDFTVTCPDGSIVRAL---KGTSGDKFVFKAPRSGMYQFCFHNP 107 (212)
Q Consensus 31 ~~~Cf~e~v~~~~~~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~---~~~~~g~~~f~~~~~G~y~~Cf~n~ 107 (212)
+...+...+. .|+.+.+. . .. ....+.|..|.+...... ......+++.+.+.+|+|++=+...
T Consensus 26 ~~~~Y~~~a~-aGQ~l~v~-l--~s---------~~~~~~i~~pg~~~~~~~~~~~~~~~~~~~~~LP~sG~Y~I~V~~~ 92 (111)
T 4g9s_B 26 DYDTYTFYAK-KGQKVHVS-I--SN---------EGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYELRVLQT 92 (111)
T ss_dssp CCEEEEEEEC-TTCEEEEE-E--SC---------TTCEEEEECTTCSSCEECSTTCTTCCTTSCEECSSSEEEEEEEECC
T ss_pred CceEEEEEec-CCCEEEEE-E--ec---------CCccEEEECCCCccccccccccccCCceEEEEecCCccEEEEEEec
Confidence 4567777888 48888877 3 22 235677888876543321 1222346788899999999999865
Q ss_pred C
Q 028178 108 T 108 (212)
Q Consensus 108 ~ 108 (212)
.
T Consensus 93 r 93 (111)
T 4g9s_B 93 R 93 (111)
T ss_dssp H
T ss_pred c
Confidence 4
No 48
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=59.24 E-value=32 Score=24.14 Aligned_cols=60 Identities=12% Similarity=0.254 Sum_probs=43.2
Q ss_pred CCEEEEeEEEEEeCccccCCCCCceeEEEEcCCCceeeeeec------------------ccCCEEEEEcCCceeeEEEE
Q 028178 43 EDTITGNVFVTTDHELFWNSDHPGIDFTVTCPDGSIVRALKG------------------TSGDKFVFKAPRSGMYQFCF 104 (212)
Q Consensus 43 ~~~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~~~------------------~~~g~~~f~~~~~G~y~~Cf 104 (212)
|..+.+. |++.... +....+.++.++|++|..++. ...+.|.......|+|.+-+
T Consensus 14 ~~~Mag~-FEi~~~~------~G~~rfrLka~NGeiI~sSe~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~~f~L 86 (130)
T 2k8e_A 14 GVIMAGW-FELSKSS------DNQFRFVLKAGNGETILTSELYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNL 86 (130)
T ss_dssp CCCCCCE-EEEEECT------TCCEEEEEECTTSCEEEECCCBSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEEEEEE
T ss_pred cceeeee-EEEEEcC------CCCEEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHHhhccccchheeeeccCCCEEEEE
Confidence 4556677 8887642 457999999999999986531 12346777777788888888
Q ss_pred EcCCC
Q 028178 105 HNPTS 109 (212)
Q Consensus 105 ~n~~~ 109 (212)
.....
T Consensus 87 ka~Ng 91 (130)
T 2k8e_A 87 KAANH 91 (130)
T ss_dssp ECTTS
T ss_pred EeCCC
Confidence 77654
No 49
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=58.70 E-value=25 Score=20.51 Aligned_cols=44 Identities=7% Similarity=0.069 Sum_probs=26.2
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Q 028178 133 EHLDPIYVRIAELREALETVSAEQRYLKALESRHRSTNESTRKR 176 (212)
Q Consensus 133 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~r 176 (212)
.+++.|...++.|...+..+..+...++.--..-.+-....+.|
T Consensus 4 aki~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~R 47 (52)
T 1jcd_A 4 AKADQASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQR 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34667777888888888888777666654333233333344444
No 50
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=57.93 E-value=19 Score=28.78 Aligned_cols=45 Identities=22% Similarity=0.378 Sum_probs=32.6
Q ss_pred CCceeEEEEcCCCceeeee-ecccCCE--EEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGDK--FVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|+|..+... .+...|. ..|++.+.|.|.+++.-..
T Consensus 142 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~g 189 (311)
T 1wlh_A 142 GDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG 189 (311)
T ss_dssp CCCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEECC
Confidence 4568999999998644332 2334564 5688999999999998654
No 51
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=57.35 E-value=52 Score=32.97 Aligned_cols=64 Identities=19% Similarity=0.257 Sum_probs=42.2
Q ss_pred CCCEEEEeEEEEEeCccccCCCCCceeEEEEcCCCceeeeeecc-cCCEEE---EEc---CCceeeEEEEEcCC
Q 028178 42 KEDTITGNVFVTTDHELFWNSDHPGIDFTVTCPDGSIVRALKGT-SGDKFV---FKA---PRSGMYQFCFHNPT 108 (212)
Q Consensus 42 ~~~~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~~~~-~~g~~~---f~~---~~~G~y~~Cf~n~~ 108 (212)
+|++|.+. .-+.+.+.. +.+..+.+.|.||+|+.+.++... ..|.++ |.. ...|.|++=+....
T Consensus 137 PGqtV~~r-~i~~d~~~~--p~~~~v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~~ 207 (1676)
T 3cu7_A 137 PDQSVKVR-VYSLNDDLK--PAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKE 207 (1676)
T ss_dssp TTCEECEE-EEEECTTCS--CCCCCEEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBSS
T ss_pred CCCEEEEE-EEEECCCCc--ccccceEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEecC
Confidence 67777766 444454322 123569999999999998876422 456555 343 34699999998754
No 52
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=56.72 E-value=9.9 Score=30.26 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=30.0
Q ss_pred CceeEEEEcCCCceeeeee-cccCC--EEEEEcCCceeeEEEEEcCC
Q 028178 65 PGIDFTVTCPDGSIVRALK-GTSGD--KFVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 65 ~~i~~~v~~p~g~~v~~~~-~~~~g--~~~f~~~~~G~y~~Cf~n~~ 108 (212)
.++.+.|.+|+|..+.-.. ....| ..+|++.+.|.|.+|+.-..
T Consensus 131 ~~l~~~V~~psG~~~~~~v~~~~~g~y~v~f~P~e~G~h~v~V~~~g 177 (288)
T 2j3s_A 131 QDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYKG 177 (288)
T ss_dssp CCEEEEEECTTCCEEEEBC-------CCCBCCCCSCEEEEEEEEETT
T ss_pred CceEEEEECCCCCeeeeEEEeCCCCEEEEEEecccceeeEEEEEECC
Confidence 4688999999998764332 12334 45688999999999988543
No 53
>1qle_D Cytochrome AA3, ccytochrome C oxidase; oxidoreductase/immune system, complex (oxidoreductase/antibody), electron transport; HET: HEA PC1; 3.0A {Paracoccus denitrificans} SCOP: f.23.8.1
Probab=55.75 E-value=25 Score=19.62 Aligned_cols=29 Identities=10% Similarity=0.028 Sum_probs=18.4
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 028178 166 HRSTNESTRKRVVFYTVSEYLLLAGAGAL 194 (212)
Q Consensus 166 ~~~~~es~~~rv~~~si~~i~vli~~~~~ 194 (212)
|.++-+.--+-..|.+++-++++++++++
T Consensus 13 hE~Ty~gFi~~~k~gt~~~~~~ll~maif 41 (43)
T 1qle_D 13 QQATFAGFIKGATWVSILSIAVLVFLALA 41 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444555677777777777777653
No 54
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=54.99 E-value=75 Score=31.82 Aligned_cols=63 Identities=19% Similarity=0.256 Sum_probs=41.2
Q ss_pred CCCEEEEeEEEEEeCccccCCCCCceeEEEEcCCCceeeeeecc---cCC--EEEEEcC---CceeeEEEEEcC
Q 028178 42 KEDTITGNVFVTTDHELFWNSDHPGIDFTVTCPDGSIVRALKGT---SGD--KFVFKAP---RSGMYQFCFHNP 107 (212)
Q Consensus 42 ~~~~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~~~~---~~g--~~~f~~~---~~G~y~~Cf~n~ 107 (212)
+|++|.+. .-+.+.+.. +.+..+.+.|.||+|+.+.+..-. ..| .+.|..+ ..|.|++=+...
T Consensus 140 PGqtV~~r-~i~~d~~~~--p~~~~v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 210 (1661)
T 2b39_A 140 PGSTVLYR-VFTVDHKLL--PVGQTVFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYE 210 (1661)
T ss_dssp TTSEEEEE-EEEECTTSC--CCCCCEEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEET
T ss_pred CCCEEEEE-EEEECCCCc--ccCceEEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEee
Confidence 56777766 444454322 123568999999999998875333 345 4555543 459999998754
No 55
>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=53.49 E-value=34 Score=20.52 Aligned_cols=46 Identities=15% Similarity=0.173 Sum_probs=34.0
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 028178 132 DEHLDPIYVRIAELREALETVSAEQRYLKALESRHRSTNESTRKRV 177 (212)
Q Consensus 132 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv 177 (212)
+++++.+...+.++.....+|-.|.+.+-..-...-...+++..++
T Consensus 8 D~~Ld~L~~~v~~lk~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~l 53 (65)
T 1gl2_D 8 DAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKL 53 (65)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888899999999999998887776665555555666655554
No 56
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} SCOP: b.23.2.0 PDB: 3jqx_A
Probab=52.57 E-value=54 Score=22.54 Aligned_cols=76 Identities=17% Similarity=0.146 Sum_probs=50.2
Q ss_pred CcceEEEecCCCCCEEEEeEEEEEeCccccCCCCCceeEEEEcCCCceeeeeecccCC---EEEEEcCCceeeEEEEEcC
Q 028178 31 DTECVYEHVIYKEDTITGNVFVTTDHELFWNSDHPGIDFTVTCPDGSIVRALKGTSGD---KFVFKAPRSGMYQFCFHNP 107 (212)
Q Consensus 31 ~~~Cf~e~v~~~~~~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~~~~~~g---~~~f~~~~~G~y~~Cf~n~ 107 (212)
....|..++++ ...|.+. +.- . ...++...+++.+++.+.... .+| .-.|.+.++|.|-+.+..-
T Consensus 37 d~D~y~F~V~~-~g~v~I~-l~~--~------~~~~~~w~ly~~~~nyv~y~~--~~gn~~~~~~~~~~pGkYYl~Vy~y 104 (121)
T 3jqw_A 37 DQDYFYFDVIT-PGEVKID-INK--L------GYGGATWVVYDENNNAVSYAT--DDGQNLSGKFKADKPGRYYIHLYMF 104 (121)
T ss_dssp CCEEEEEEESS-CEEEEEE-EEE--C------SSSEEEEEEECTTSCEEEECE--ECSSEEEEEEEECSCEEEEEEEEEE
T ss_pred CeeEEEEEeCC-CCeEEEE-EEe--c------CCCcEEEEEEeCCCCeEEEec--cCCCEEEEEEEeCCCeeEEEEEEEe
Confidence 47899999996 6677777 433 2 245799999988776665544 233 2346777999999999975
Q ss_pred CCCCeEEEEEE
Q 028178 108 TSTPEEVSFYI 118 (212)
Q Consensus 108 ~~~~~~V~f~i 118 (212)
........|.+
T Consensus 105 ~~~~g~Y~l~i 115 (121)
T 3jqw_A 105 NGSYMPYRINI 115 (121)
T ss_dssp ECSCEEEEEEE
T ss_pred cCCCccEEEEE
Confidence 44333334433
No 57
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=52.57 E-value=25 Score=26.44 Aligned_cols=45 Identities=22% Similarity=0.378 Sum_probs=32.4
Q ss_pred CCceeEEEEcCCCceeeee-ecccCCE--EEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRAL-KGTSGDK--FVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~-~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|+|..+.-. .+...|. ..|++.+.|.|.+-+.-..
T Consensus 43 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g 90 (212)
T 1qfh_A 43 GDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG 90 (212)
T ss_dssp CCCEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEETT
T ss_pred CCeEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEECC
Confidence 4569999999998654433 2334564 5688999999999988654
No 58
>1m56_D Cytochrome C oxidase; membrane protein, oxidoreductase; HET: HEA PEH; 2.30A {Rhodobacter sphaeroides} SCOP: f.23.8.1 PDB: 1m57_D*
Probab=51.99 E-value=33 Score=19.89 Aligned_cols=29 Identities=14% Similarity=-0.057 Sum_probs=18.5
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 028178 166 HRSTNESTRKRVVFYTVSEYLLLAGAGAL 194 (212)
Q Consensus 166 ~~~~~es~~~rv~~~si~~i~vli~~~~~ 194 (212)
|.++-+.--+-..|.+++-++++++++++
T Consensus 21 he~Ty~gFi~~~k~gt~~~~~~ll~laif 49 (51)
T 1m56_D 21 QEKTFAGFVRMVTWAAVVIVAALIFLALA 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455667777777777777764
No 59
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=49.45 E-value=95 Score=31.17 Aligned_cols=45 Identities=9% Similarity=0.121 Sum_probs=30.6
Q ss_pred CCceeEEEEcCCCceeeeeecccCCEEEEEc---CCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGDKFVFKA---PRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g~~~f~~---~~~G~y~~Cf~n~~ 108 (212)
+..+.+.|.||+|+.+..+.-...-..+|.. ...|.|++......
T Consensus 158 ~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~~~ 205 (1642)
T 3prx_B 158 NKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEH 205 (1642)
T ss_dssp CCCEEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEETT
T ss_pred CceEEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEeCC
Confidence 4568999999999999876432222234443 34699999998543
No 60
>2nps_D Syntaxin-6; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Homo sapiens}
Probab=48.23 E-value=49 Score=20.88 Aligned_cols=46 Identities=22% Similarity=0.255 Sum_probs=34.0
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 028178 132 DEHLDPIYVRIAELREALETVSAEQRYLKALESRHRSTNESTRKRV 177 (212)
Q Consensus 132 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv 177 (212)
+++++.+...+.+|.....+|-+|.+..-.--...-...+++..++
T Consensus 18 D~~Ld~L~~~v~~LK~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~L 63 (82)
T 2nps_D 18 DEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRL 63 (82)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999998887776655555555555555554
No 61
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=46.61 E-value=26 Score=24.21 Aligned_cols=52 Identities=13% Similarity=0.199 Sum_probs=36.0
Q ss_pred CceeEEEEcCCCceeeeeecccCCEEEEEcCCceeeEEEEEcCCCC---CeEEEEEE
Q 028178 65 PGIDFTVTCPDGSIVRALKGTSGDKFVFKAPRSGMYQFCFHNPTST---PEEVSFYI 118 (212)
Q Consensus 65 ~~i~~~v~~p~g~~v~~~~~~~~g~~~f~~~~~G~y~~Cf~n~~~~---~~~V~f~i 118 (212)
.+..|.|++.+|+.+.... ..|.+.+.--..|.|.+-=.-.... ...+.|.+
T Consensus 43 ~GA~F~l~~~~g~~v~~~~--sdG~~~~~~L~~G~Y~l~EtkAP~GY~l~~~i~ftV 97 (121)
T 2x5p_A 43 AGATMELRDSSGKTISTWI--SDGQVKDFYLMPGKYTFVETAAPDGYEVATAITFTV 97 (121)
T ss_dssp CCCEEEEECTTSCEEEEEE--CCSSCEEEEECSEEEEEEEEECCTTCCCCCCEEEEE
T ss_pred CCCEEEEEECCCCEEEEEE--eCCEEEEcccCCcEEEEEEEeCCCCcccCCCEEEEE
Confidence 5688999999999876543 4688888877889998865543321 23455555
No 62
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=44.92 E-value=87 Score=27.25 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=40.1
Q ss_pred CCceeEEEEcCCCceeeeeecc--cCCEEEEEcCCceeeEEEEEcCCCCCeEEEEEEEE
Q 028178 64 HPGIDFTVTCPDGSIVRALKGT--SGDKFVFKAPRSGMYQFCFHNPTSTPEEVSFYIHI 120 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~--~~g~~~f~~~~~G~y~~Cf~n~~~~~~~V~f~i~~ 120 (212)
..+++++|++|+|..+...... ...+..+.....|+|.+-+...... ..+.|++.+
T Consensus 458 ~~dldl~l~~p~G~~~~~~~~~~~~~E~v~~~~~~~G~y~i~V~~~~~s-g~y~~~l~~ 515 (539)
T 3afg_A 458 GSDLDLYLYDPNGNQVDYSYTAYYGFEKVGYYNPTAGTWTIKVVSYSGS-ANYQVDVVS 515 (539)
T ss_dssp TCEEEEEEECTTSCEEEEECCSSBSCEEEEEESCCSEEEEEEEEEEESC-EEEEEEEEE
T ss_pred CCCeEEEEECCCCCEeeccccCCCceeEEEECCCCCEEEEEEEEeccCC-ceEEEEEEE
Confidence 4679999999999987654322 2235678888999999999875543 455666665
No 63
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=42.45 E-value=71 Score=25.12 Aligned_cols=44 Identities=11% Similarity=0.239 Sum_probs=29.9
Q ss_pred CCceeEEEEcCCCceeeeeecccCCE--EEEEcCCceeeEEEEEcCC
Q 028178 64 HPGIDFTVTCPDGSIVRALKGTSGDK--FVFKAPRSGMYQFCFHNPT 108 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 108 (212)
...+.+.|.+|.+..+.- .+...|. .+|++.++|.|.+++.-..
T Consensus 227 ~g~l~v~v~gp~~~~~~~-~d~~dGt~~v~y~p~~~G~y~i~V~~~~ 272 (288)
T 2j3s_A 227 AGGLAIAVEGPSKAEISF-EDRKDGSCGVAYVVQEPGDYEVSVKFNE 272 (288)
T ss_dssp SEEEEEEEEESSCEEEEE-EECTTSEEEEEEEESSCEEEEEEEEETT
T ss_pred CCceEEEEeCCCCcceeE-EECCCCEEEEEEEcCCCeeEEEEEEECC
Confidence 445788888887644322 3345564 5788899999999888543
No 64
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=41.76 E-value=1.9e+02 Score=28.62 Aligned_cols=64 Identities=17% Similarity=0.245 Sum_probs=38.8
Q ss_pred CCCEEEEeEEEEEeCccccCCCCCce-eEEEEcCCCceeeeeec--ccCCEE--EEEc---CCceeeEEEEEcCC
Q 028178 42 KEDTITGNVFVTTDHELFWNSDHPGI-DFTVTCPDGSIVRALKG--TSGDKF--VFKA---PRSGMYQFCFHNPT 108 (212)
Q Consensus 42 ~~~~i~~~~y~v~~~~~~~~~~~~~i-~~~v~~p~g~~v~~~~~--~~~g~~--~f~~---~~~G~y~~Cf~n~~ 108 (212)
+|+.+.+. --+.+.+.. +.+..+ .++|.||+|+.+.++.. ...|.+ +|.. ...|.|+|-.....
T Consensus 117 Pgq~V~~r-v~~~~~~~~--p~~~~~~~v~i~dp~g~~i~~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~~ 188 (1451)
T 4acq_A 117 PGQTVKFR-VVSMDENFH--PLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKS 188 (1451)
T ss_dssp TTCEEEEE-EEEECTTCC--BCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTT
T ss_pred CCCEEEEE-EEEECCCCc--CccCceeEEEEECCCCCEEEEeeeccCCCCeEEEEeECCCCCCceeEEEEEEecC
Confidence 56777766 333343311 122344 68999999999987543 234643 4443 34699999998654
No 65
>3fn2_A Putative sensor histidine kinase domain; GUT microbiome, structural genomics protein structure initiative; HET: MSE; 1.90A {Clostridium symbiosum atcc 14940}
Probab=39.99 E-value=41 Score=22.50 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=28.8
Q ss_pred eeEEEEcCCCceeeeeecccCCEEEEEcCCcee---eEEEEE
Q 028178 67 IDFTVTCPDGSIVRALKGTSGDKFVFKAPRSGM---YQFCFH 105 (212)
Q Consensus 67 i~~~v~~p~g~~v~~~~~~~~g~~~f~~~~~G~---y~~Cf~ 105 (212)
=.+.|+|.+|.++........+...+-+.++|. +++||.
T Consensus 50 ~~lrI~D~~G~vi~~~~~~a~~~~~vLa~~g~n~lGW~Ley~ 91 (106)
T 3fn2_A 50 GYVRITDKDGQVITYEDGSVQDKTVFLTNEGANKLGWKLEFL 91 (106)
T ss_dssp CEEEEECTTSCBCSCCCSCSTTEEEEEEECSCCTTCCEEEEE
T ss_pred CcEEEEcCCCCEEecCCCCcCcceeehhhcCCCccceEEEEE
Confidence 357899999999986666666787888877763 466664
No 66
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=38.11 E-value=95 Score=21.26 Aligned_cols=16 Identities=13% Similarity=0.505 Sum_probs=11.0
Q ss_pred CCEEEEEcCCceeeEE
Q 028178 87 GDKFVFKAPRSGMYQF 102 (212)
Q Consensus 87 ~g~~~f~~~~~G~y~~ 102 (212)
...++++..++|.|.+
T Consensus 102 G~t~~~tF~~~G~y~y 117 (132)
T 3c75_A 102 DQAYAITFNEAGSYDY 117 (132)
T ss_dssp TEEEEEEECSCEEEEE
T ss_pred CCEEEEEcCCCEEEEE
Confidence 3356666678898864
No 67
>1n7s_D SNAP-25A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_D 3rk3_D 3rl0_D 1kil_D 3hd7_D* 3hd9_D 3ipd_D 1urq_D 1xtg_B
Probab=36.24 E-value=69 Score=19.13 Aligned_cols=46 Identities=22% Similarity=0.249 Sum_probs=32.6
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 028178 132 DEHLDPIYVRIAELREALETVSAEQRYLKALESRHRSTNESTRKRV 177 (212)
Q Consensus 132 ~~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv 177 (212)
++.++.+...+.++.....+|-.|.+.+-..-.+.-...+++..++
T Consensus 9 D~~Ld~L~~~v~~lk~la~~ig~El~~Qn~~Ld~l~~~~d~~~~~l 54 (66)
T 1n7s_D 9 DENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRI 54 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 3457778888888888888888887776665566656666665554
No 68
>1sfc_D Protein (SNAP-25B), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=36.06 E-value=79 Score=20.19 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=31.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 028178 133 EHLDPIYVRIAELREALETVSAEQRYLKALESRHRSTNESTRKRV 177 (212)
Q Consensus 133 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv 177 (212)
+.++.|...+.+|.....+|-.|.+.+-..-.+.-..++++..++
T Consensus 29 ~~Ld~Ls~~v~rLk~la~~ig~Eld~Qn~~Ld~i~~~~D~~~~rl 73 (87)
T 1sfc_D 29 ENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRI 73 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 456777777777777777787777776666566666666666555
No 69
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=34.70 E-value=1.1e+02 Score=20.97 Aligned_cols=40 Identities=10% Similarity=-0.051 Sum_probs=25.5
Q ss_pred CCEEEEeEEEEEeCcccc----CCCCCceeEEEEcCCCceeeeee
Q 028178 43 EDTITGNVFVTTDHELFW----NSDHPGIDFTVTCPDGSIVRALK 83 (212)
Q Consensus 43 ~~~i~~~~y~v~~~~~~~----~~~~~~i~~~v~~p~g~~v~~~~ 83 (212)
|+.+.+. +.+...+... -++....++.|+|++|+.+|..+
T Consensus 17 g~~v~~~-ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS 60 (120)
T 3isy_A 17 PEQIKFN-MSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYS 60 (120)
T ss_dssp SSCEEEE-EEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETT
T ss_pred CCeEEEE-EEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEcc
Confidence 4455666 6665433211 02456789999999999999543
No 70
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=33.20 E-value=82 Score=20.14 Aligned_cols=41 Identities=12% Similarity=0.188 Sum_probs=23.6
Q ss_pred CCceeEEEEcCCC-ceeeeeecccCCEEEEEc---------CCceeeEEEE
Q 028178 64 HPGIDFTVTCPDG-SIVRALKGTSGDKFVFKA---------PRSGMYQFCF 104 (212)
Q Consensus 64 ~~~i~~~v~~p~g-~~v~~~~~~~~g~~~f~~---------~~~G~y~~Cf 104 (212)
+-.|.|.+++-.. -.+....-..+|.++|++ +..|.|-+--
T Consensus 17 gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~~G~Gd~~v~A~k~G~~g~a~ 67 (82)
T 3e8v_A 17 DATVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSK 67 (82)
T ss_dssp TCEEEEEEEETTEEEEEEEEECCTTSEEEEECCSEEEEEEEEETTEEEEEE
T ss_pred CCEEEEEEEEchheeEEEEEEECCCceEEEEEcCCceEEEeccCCEEEEEE
Confidence 4457777776321 122223345668888888 7777765553
No 71
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=29.31 E-value=1.2e+02 Score=19.59 Aligned_cols=31 Identities=10% Similarity=0.255 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 028178 150 ETVSAEQRYLKALESRHRSTNESTRKRVVFYT 181 (212)
Q Consensus 150 ~~i~~~q~~~~~re~~~~~~~es~~~rv~~~s 181 (212)
+++.+.-+-+......++..+...+++. ||-
T Consensus 36 ~~L~~kt~~L~~~s~~F~~~A~~l~rkm-wwk 66 (91)
T 3hd7_A 36 SELDDRADALQAGASQFETSAAKLKRKY-WWK 66 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 3333333444444455666666665554 443
No 72
>1nqj_A Class 1 collagenase; beta sandwich, metalloprotease, collagen-binding domain, lithium, chlorine, hydrolase; 1.00A {Clostridium histolyticum} SCOP: b.23.2.1 PDB: 2o8o_A 1nqd_A
Probab=29.07 E-value=1.4e+02 Score=20.39 Aligned_cols=74 Identities=12% Similarity=0.088 Sum_probs=44.5
Q ss_pred CcceEEEecCCCCCEEEEeEEEEEeCccccCCCCCceeEEEEcCCC--ceeeeeecccCC---EEEEEcCCceeeEEEEE
Q 028178 31 DTECVYEHVIYKEDTITGNVFVTTDHELFWNSDHPGIDFTVTCPDG--SIVRALKGTSGD---KFVFKAPRSGMYQFCFH 105 (212)
Q Consensus 31 ~~~Cf~e~v~~~~~~i~~~~y~v~~~~~~~~~~~~~i~~~v~~p~g--~~v~~~~~~~~g---~~~f~~~~~G~y~~Cf~ 105 (212)
....|..+|++ ...|.++ + ... ...+++..+++.++ +.+-.. ..+| .-+|.+. +|.|-+.++
T Consensus 39 ~~D~y~f~v~~-~g~v~I~-l--~~~------~~~~~~w~ly~~~dl~nyv~y~--~~~gn~~~~~~~~~-pGkYYl~Vy 105 (119)
T 1nqj_A 39 SRDYYSFEVKE-EGEVNIE-L--DKK------DEFGVTWTLHPESNINDRITYG--QVDGNKVSNKVKLR-PGKYYLLVY 105 (119)
T ss_dssp CEEEEEEEESS-CEEEEEE-E--EES------SSSEEEEEEEECC----CCEEC--EEETTEEEEEEEEC-SEEEEEEEE
T ss_pred CcEEEEEECCC-CCeEEEE-E--EeC------CCCCEEEEEEccCCCccceEEe--ecCCCcEEEEEEcC-CcEEEEEEE
Confidence 36789999995 6677777 4 332 13568999998876 544332 2222 2346665 999999998
Q ss_pred cCCCCCeEEEEEE
Q 028178 106 NPTSTPEEVSFYI 118 (212)
Q Consensus 106 n~~~~~~~V~f~i 118 (212)
.- +..-...|.+
T Consensus 106 ~y-~~~g~Y~l~v 117 (119)
T 1nqj_A 106 KY-SGSGNYELRV 117 (119)
T ss_dssp EE-ESCEEEEEEE
T ss_pred Ee-CCCceEEEEE
Confidence 64 3333444433
No 73
>2lsj_B DNA polymerase kappa; REV1, RIR, POL kappa, translesion synthesis, TLS, CTD, prote binding-protein binding complex; HET: DNA; NMR {Mus musculus}
Probab=34.59 E-value=12 Score=18.29 Aligned_cols=11 Identities=18% Similarity=0.338 Sum_probs=7.9
Q ss_pred HHHHHhccccc
Q 028178 198 YIRRLFGKTAA 208 (212)
Q Consensus 198 ~lk~fF~~kk~ 208 (212)
+=++||.+|+.
T Consensus 5 ~K~SFFdKKRs 15 (26)
T 2lsj_B 5 HKKSFFDKKRS 15 (26)
Confidence 34789988775
No 74
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=27.04 E-value=85 Score=17.39 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=10.3
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 028178 137 PIYVRIAELREALETVSAE 155 (212)
Q Consensus 137 ~l~~~l~~l~~~l~~i~~~ 155 (212)
.++.+|..|+.++.++...
T Consensus 20 ~LE~Ri~~LE~KLd~L~~~ 38 (43)
T 2pnv_A 20 DFEKRIVTLETKLETLIGS 38 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555443
No 75
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=25.96 E-value=1.8e+02 Score=22.45 Aligned_cols=26 Identities=12% Similarity=0.378 Sum_probs=19.6
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHH
Q 028178 133 EHLDPIYVRIAELREALETVSAEQRY 158 (212)
Q Consensus 133 ~~~~~l~~~l~~l~~~l~~i~~~q~~ 158 (212)
..++++++.+..|++.+.+|.....-
T Consensus 6 sRvd~~EErIs~le~rleei~q~eq~ 31 (233)
T 2yko_A 6 SRCDQLEERVSAAEDEINEIKREGKF 31 (233)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34778899999999999888765433
No 76
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=25.84 E-value=1e+02 Score=17.94 Aligned_cols=24 Identities=17% Similarity=0.061 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHhcccccc
Q 028178 186 LLLAGAGALQVMYIRRLFGKTAAY 209 (212)
Q Consensus 186 ~vli~~~~~Qv~~lk~fF~~kk~~ 209 (212)
.+++++-+.-+.+--.||++|+.+
T Consensus 22 GLllL~li~~~LwK~GFFkR~~~~ 45 (54)
T 2knc_A 22 GLLLLTILVLAMWKVGFFKRNRPP 45 (54)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCCS
T ss_pred HHHHHHHHHHHHHHcCcccCCCCC
Confidence 344444555566666899998754
No 77
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=24.89 E-value=1.7e+02 Score=19.97 Aligned_cols=50 Identities=6% Similarity=0.209 Sum_probs=32.2
Q ss_pred EEEEeCccccCCCCCceeEEEEcCCCceeeeeec-----------------c-cCCEEEEEcCCceeeEEEEEc
Q 028178 51 FVTTDHELFWNSDHPGIDFTVTCPDGSIVRALKG-----------------T-SGDKFVFKAPRSGMYQFCFHN 106 (212)
Q Consensus 51 y~v~~~~~~~~~~~~~i~~~v~~p~g~~v~~~~~-----------------~-~~g~~~f~~~~~G~y~~Cf~n 106 (212)
|++... .+....|.++.+||++|..++. . ....|.......|.|.|=+..
T Consensus 5 FEi~~~------~~g~~rFrLka~NgeiI~sSe~Y~sk~~a~~gI~sVk~na~~~~~fe~~~~~~gk~yF~Lka 72 (118)
T 2k49_A 5 YELSKS------SNDQFKFVLKAGNGEVILTSELYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLKA 72 (118)
T ss_dssp EEEEEC------TTSCEEEEEECSSSCEEEECCCBSSHHHHHHHHHHHHHHTTCGGGEEEEEETTTEEEEEEEC
T ss_pred EEEEEc------CCCCEEEEEEECCCCEEEECCCcCCHHHHHHHHHHHHHhCcccceEEEEEccCCCEEEEEEc
Confidence 777553 2456999999999999986442 1 123566666666666654444
No 78
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=24.20 E-value=1.1e+02 Score=17.79 Aligned_cols=23 Identities=13% Similarity=0.053 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHhccccc
Q 028178 186 LLLAGAGALQVMYIRRLFGKTAA 208 (212)
Q Consensus 186 ~vli~~~~~Qv~~lk~fF~~kk~ 208 (212)
.+++++-..-+.+--.||++|+.
T Consensus 19 GLLLL~Lii~~LwK~GFFKR~~~ 41 (54)
T 2l8s_A 19 GLLLLMLLILALWKIGFFKRPLK 41 (54)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHHHHHHcCcccCCCc
Confidence 34444445555566689998874
No 79
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=23.96 E-value=87 Score=26.18 Aligned_cols=43 Identities=23% Similarity=0.399 Sum_probs=28.3
Q ss_pred CceeEEEEcCCCceeeeeecc--------cC---CEEEEEcCCceeeEEEEEcC
Q 028178 65 PGIDFTVTCPDGSIVRALKGT--------SG---DKFVFKAPRSGMYQFCFHNP 107 (212)
Q Consensus 65 ~~i~~~v~~p~g~~v~~~~~~--------~~---g~~~f~~~~~G~y~~Cf~n~ 107 (212)
.++++.|+.|+|..++-.... .. .+..+..+..|+|++-+...
T Consensus 366 ndldl~v~~~~g~~~~~n~~~~~~~~~~d~~~n~E~v~~~~~~~G~y~i~V~~~ 419 (434)
T 1wmd_A 366 NDLDLVITAPNGTQYVGNDFTSPYNDNWDGRNNVENVFINAPQSGTYTIEVQAY 419 (434)
T ss_dssp SEEEEEEECTTSCEEETTCCSSSTTSCCCSSCSEEEEEESSCCSEEEEEEEEEE
T ss_pred eccCEEEEeCCCCEEeCCCccccccCCCCCCCceeEEEEcCCCCeEEEEEEEEE
Confidence 479999999999886521111 11 24556667788888887643
No 80
>3v1a_A Computational design, MID1-APO1; helix-turn-helix, metal binding, homodimer, de novo protein, binding protein; 0.98A {Artificial gene} PDB: 3v1b_A* 3v1c_A* 3v1d_A* 3v1f_A* 3v1e_A
Probab=23.86 E-value=34 Score=19.57 Aligned_cols=17 Identities=29% Similarity=0.436 Sum_probs=14.3
Q ss_pred HHHHHHHHhcccccccC
Q 028178 195 QVMYIRRLFGKTAAYGR 211 (212)
Q Consensus 195 Qv~~lk~fF~~kk~~~~ 211 (212)
|++.|+.|.+.-+.++|
T Consensus 9 Q~~~I~~~I~qAk~~rR 25 (48)
T 3v1a_A 9 QIKNIHSFIHQAKAAGR 25 (48)
T ss_dssp HHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 88899999888877776
No 81
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=23.59 E-value=1.3e+02 Score=18.12 Aligned_cols=20 Identities=5% Similarity=0.125 Sum_probs=16.1
Q ss_pred CCceeEEEEcCCCceeeeee
Q 028178 64 HPGIDFTVTCPDGSIVRALK 83 (212)
Q Consensus 64 ~~~i~~~v~~p~g~~v~~~~ 83 (212)
+....|.++.+||++|..++
T Consensus 10 ~G~frfrLka~NGevI~sSe 29 (64)
T 3bid_A 10 KGEYRWRLKAANHEIIAQGE 29 (64)
T ss_dssp TSCEEEEEECTTSCEEEECC
T ss_pred CCCEEEEEEeCCCCEEEECC
Confidence 45689999999999998544
No 82
>1z65_A PRPLP, prion-like protein doppel, doppelganger; transmembrane helix, DHPC, mouse doppel, unknown function; NMR {Synthetic}
Probab=23.57 E-value=80 Score=15.90 Aligned_cols=18 Identities=22% Similarity=0.180 Sum_probs=9.1
Q ss_pred CCccchhHHHHHHHHHHH
Q 028178 1 MRRRSAQVCLVIGFILSF 18 (212)
Q Consensus 1 ~~~~~~~~~~~~~~l~~l 18 (212)
||+.----|+++.+.|++
T Consensus 1 MrkhLG~~wlai~c~LLf 18 (30)
T 1z65_A 1 MKNRLGTWWVAILCMLLA 18 (30)
T ss_dssp CCSSCSSHHHHHHHHHHH
T ss_pred CcchhhhhHHHHHHHHHH
Confidence 565544445655554443
No 83
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=22.80 E-value=95 Score=16.39 Aligned_cols=24 Identities=13% Similarity=0.239 Sum_probs=11.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHH
Q 028178 135 LDPIYVRIAELREALETVSAEQRY 158 (212)
Q Consensus 135 ~~~l~~~l~~l~~~l~~i~~~q~~ 158 (212)
++.++..+..|...-.++.++...
T Consensus 3 MnQLE~KVEeLl~~~~~Le~eV~R 26 (36)
T 1kd8_B 3 VKQLKAKVEELKSKLWHLKNKVAR 26 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHH
Confidence 344555555555555555444433
No 84
>1l4a_D S-SNAP25 fusion protein; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1
Probab=22.55 E-value=1.1e+02 Score=19.53 Aligned_cols=45 Identities=18% Similarity=0.213 Sum_probs=29.5
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 028178 133 EHLDPIYVRIAELREALETVSAEQRYLKALESRHRSTNESTRKRV 177 (212)
Q Consensus 133 ~~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv 177 (212)
+.++.+...+.+|.....+|-.|.+.+-..-.+.-..++++..++
T Consensus 30 ~~Ld~ls~~l~rLk~mA~~mg~Eld~Qn~~LD~i~~~~D~~~~rl 74 (87)
T 1l4a_D 30 NNMKEVSSMIGNLRNMAIDMGNEIGSQNRQVDRIQQKAESNESRI 74 (87)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346666666777777777777776666655565556666666655
No 85
>3ogl_Q JAZ1 incomplete degron peptide; leucine-rich repeats, ubiquitin ligase, SCF, protein binding; HET: 7JA; 3.18A {Arabidopsis thaliana} PDB: 3ogm_Q*
Probab=22.27 E-value=29 Score=16.18 Aligned_cols=11 Identities=18% Similarity=0.356 Sum_probs=7.9
Q ss_pred HHHHHhccccc
Q 028178 198 YIRRLFGKTAA 208 (212)
Q Consensus 198 ~lk~fF~~kk~ 208 (212)
.|.+||.++|.
T Consensus 9 SLqRFleKRk~ 19 (21)
T 3ogl_Q 9 SLHRFLEKRKD 19 (26)
T ss_pred HHHHHHHHhhc
Confidence 57788887763
No 86
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=20.69 E-value=1e+02 Score=25.15 Aligned_cols=41 Identities=20% Similarity=0.232 Sum_probs=28.8
Q ss_pred CceeEEEEcCCCceee------eeecccCCEEEEEcCCceeeEEEEE
Q 028178 65 PGIDFTVTCPDGSIVR------ALKGTSGDKFVFKAPRSGMYQFCFH 105 (212)
Q Consensus 65 ~~i~~~v~~p~g~~v~------~~~~~~~g~~~f~~~~~G~y~~Cf~ 105 (212)
.+..|.|++++|..+. ...-...|.+.|.--..|.|.+==.
T Consensus 267 ~GA~F~l~~~~g~~~~~~~~~~~~~td~~G~~~~~~L~~G~Y~l~E~ 313 (355)
T 3kpt_A 267 KGAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIFET 313 (355)
T ss_dssp SCCEEEEEETTSCBCBSSSSBCEEECCTTSEEEEEEEESSEEEEEEE
T ss_pred CCCEEEEEeCCCCEEEeccceEEEEECCCCeEEECcCCCceEEEEEE
Confidence 4688899999988775 2233356888888777788876443
Done!