Your job contains 1 sequence.
>028191
MDISLWLKLLFAVELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENL
GMAMIYTLVTSAKEWLSERYSQDAGIDNTGEEELEKDEVIVPHGEPVTVETFLAWRERFE
AELALERAKLMPESALTAPKEKKLTGRQWFESGRATAVSQKGAVTVNEVSDDEDDEDIDF
DDDDFEDDEVDMLEHYLAEKSDSSTHSSRQPS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028191
(212 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2017532 - symbol:AT1G51730 species:3702 "Arabi... 526 1.3e-50 1
ZFIN|ZDB-GENE-040718-270 - symbol:rwdd1 "RWD domain conta... 192 3.3e-15 1
MGI|MGI:1913771 - symbol:Rwdd1 "RWD domain containing 1" ... 185 1.8e-14 1
UNIPROTKB|Q9H446 - symbol:RWDD1 "RWD domain-containing pr... 184 2.3e-14 1
POMBASE|SPCC1393.09c - symbol:SPCC1393.09c "RWD domain pr... 113 2.7e-05 1
UNIPROTKB|G4MRT5 - symbol:MGG_04566 "RWD domain-containin... 112 4.9e-05 1
WB|WBGene00012037 - symbol:T26E3.4 species:6239 "Caenorha... 112 5.5e-05 1
>TAIR|locus:2017532 [details] [associations]
symbol:AT1G51730 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR006575 Pfam:PF05773
PROSITE:PS50908 SMART:SM00591 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC025294 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 eggNOG:NOG301416
HOGENOM:HOG000237961 OMA:LDSIYCG UniGene:At.19414 UniGene:At.21082
EMBL:AY081291 EMBL:BT000383 IPI:IPI00533675 PIR:C96556
RefSeq:NP_175584.1 ProteinModelPortal:Q9C8I1 SMR:Q9C8I1
STRING:Q9C8I1 PaxDb:Q9C8I1 PRIDE:Q9C8I1 EnsemblPlants:AT1G51730.1
GeneID:841598 KEGG:ath:AT1G51730 TAIR:At1g51730 InParanoid:Q9C8I1
PhylomeDB:Q9C8I1 ProtClustDB:CLSN2679429 ArrayExpress:Q9C8I1
Genevestigator:Q9C8I1 Uniprot:Q9C8I1
Length = 252
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 114/198 (57%), Positives = 128/198 (64%)
Query: 13 VELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSA 72
V+LAL+FSHTE YPDE PLL+VKS+RGI DL ILKEKLEQEASENLGMAMIYTLV+SA
Sbjct: 59 VQLALVFSHTENYPDEAPLLDVKSIRGIHVSDLTILKEKLEQEASENLGMAMIYTLVSSA 118
Query: 73 KEWLSERYSQDAGIDNTGEEELEKDEVIVPHGEPVTVETFXXXXXXXXXXXXXXXXXXMP 132
K+WLSE Y QD + E ++DEVIVPHGEPVT+ETF MP
Sbjct: 119 KDWLSEHYGQDDAAEFAEVEAAKEDEVIVPHGEPVTLETFLAWRERYEAELALERAKLMP 178
Query: 133 ESALTAPKEKKLTGRQWFESGRATAVSQKGAVTV-NEVSXXXXXXXXXXXXXXXXXXXXX 191
ESALTAPKEKKLTGRQWFESGR +G V + +E
Sbjct: 179 ESALTAPKEKKLTGRQWFESGRG-----RGTVVIADEEDEEEDEEDIDFEDEDFEDDEED 233
Query: 192 MLEHYLAEKSDSSTHSSR 209
MLEHYLAEKSDSS +R
Sbjct: 234 MLEHYLAEKSDSSAPPTR 251
>ZFIN|ZDB-GENE-040718-270 [details] [associations]
symbol:rwdd1 "RWD domain containing 1" species:7955
"Danio rerio" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR006575 Pfam:PF05773 PROSITE:PS50908 SMART:SM00591
ZFIN:ZDB-GENE-040718-270 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 EMBL:CT027708 GeneTree:ENSGT00390000009168
IPI:IPI00491916 Ensembl:ENSDART00000143928 Bgee:F1Q5G7
Uniprot:F1Q5G7
Length = 240
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 51/144 (35%), Positives = 73/144 (50%)
Query: 13 VELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSA 72
+EL L F++ EKYPDEPPL + S ++ D + + L+Q+A ENLGM MI+TLVT+
Sbjct: 48 LELTLKFTYVEKYPDEPPLWEIFSQENLEDSDAEEILTLLKQQAEENLGMVMIFTLVTAV 107
Query: 73 KEWLSERYSQDAGI----DNTGEEELEKDEVIVPHGEPVTVETFXXXXXXXXXXXXXXXX 128
+E L+E Q ++E E+ E G VT+ETF
Sbjct: 108 QEKLNEIIDQIKSRREEEKQRKQKEAEEAEKRAFQGTVVTIETFLSWKAKFEAEMIELKK 167
Query: 129 XXMPESALTAPKEKKLTGRQWFES 152
E + +KKLTG+Q FE+
Sbjct: 168 KRQKEEEQSG--KKKLTGKQLFET 189
>MGI|MGI:1913771 [details] [associations]
symbol:Rwdd1 "RWD domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006575 Pfam:PF05773 PROSITE:PS50908
SMART:SM00591 MGI:MGI:1913771 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 eggNOG:NOG301416 GeneTree:ENSGT00390000009168
CTD:51389 HOGENOM:HOG000237961 HOVERGEN:HBG060864 OMA:LDSIYCG
OrthoDB:EOG46T32H EMBL:AF503942 EMBL:AK003262 EMBL:AK005278
EMBL:AK011277 EMBL:BC062136 IPI:IPI00132659 RefSeq:NP_079890.1
UniGene:Mm.28528 ProteinModelPortal:Q9CQK7 SMR:Q9CQK7 STRING:Q9CQK7
PhosphoSite:Q9CQK7 PaxDb:Q9CQK7 PRIDE:Q9CQK7 DNASU:66521
Ensembl:ENSMUST00000019917 GeneID:66521 KEGG:mmu:66521
UCSC:uc007eun.1 InParanoid:Q9CQK7 ChiTaRS:RWDD1 NextBio:321924
Bgee:Q9CQK7 CleanEx:MM_RWDD1 Genevestigator:Q9CQK7
GermOnline:ENSMUSG00000019782 Uniprot:Q9CQK7
Length = 243
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 49/144 (34%), Positives = 72/144 (50%)
Query: 13 VELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSA 72
V+ L F+++EKYPDE PL + S ++ D+ + + L +A ENLGM MI+TLVT+
Sbjct: 48 VQTTLKFTYSEKYPDETPLYEIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAV 107
Query: 73 KEWLSERYSQ----DAGIDNTGEEELEKDEVIVPHGEPVTVETFXXXXXXXXXXXXXXXX 128
+E L+E Q E+E E+ E + HG PVT+E F
Sbjct: 108 QEKLNEIVDQIKTRREEEKKQKEKEAEEAEKKLFHGTPVTIENFLSWKAKFDAELLEIKK 167
Query: 129 XXMPESALTAPKEKKLTGRQWFES 152
M E + KL+G+Q FE+
Sbjct: 168 KRMKEEEQAG--KNKLSGKQLFET 189
>UNIPROTKB|Q9H446 [details] [associations]
symbol:RWDD1 "RWD domain-containing protein 1" species:9606
"Homo sapiens" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR006575 Pfam:PF05773 PROSITE:PS50908 SMART:SM00591
EMBL:CH471051 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
EMBL:AL121953 eggNOG:NOG301416 EMBL:AF132958 EMBL:AF092134
EMBL:AK290727 EMBL:AK301089 EMBL:BC015802 IPI:IPI00034010
IPI:IPI00479265 RefSeq:NP_001007465.1 RefSeq:NP_057036.2
RefSeq:NP_057188.2 UniGene:Hs.532164 PDB:2EBM PDBsum:2EBM
ProteinModelPortal:Q9H446 SMR:Q9H446 DIP:DIP-34520N IntAct:Q9H446
MINT:MINT-1436573 STRING:Q9H446 PhosphoSite:Q9H446 DMDM:34098713
PaxDb:Q9H446 PRIDE:Q9H446 DNASU:51389 Ensembl:ENST00000466444
GeneID:51389 KEGG:hsa:51389 UCSC:uc003pxb.3 CTD:51389
GeneCards:GC06P116938 HGNC:HGNC:20993 HPA:HPA028712 HPA:HPA028713
neXtProt:NX_Q9H446 PharmGKB:PA134967923 HOGENOM:HOG000237961
HOVERGEN:HBG060864 InParanoid:Q9H446 OMA:LDSIYCG OrthoDB:EOG46T32H
PhylomeDB:Q9H446 EvolutionaryTrace:Q9H446 GenomeRNAi:51389
NextBio:54913 ArrayExpress:Q9H446 Bgee:Q9H446 CleanEx:HS_RWDD1
Genevestigator:Q9H446 GermOnline:ENSG00000111832 Uniprot:Q9H446
Length = 243
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 49/144 (34%), Positives = 72/144 (50%)
Query: 13 VELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSA 72
V+ L F+++EKYPDE PL + S ++ D+ + + L +A ENLGM MI+TLVT+
Sbjct: 48 VQTTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAV 107
Query: 73 KEWLSERYSQ----DAGIDNTGEEELEKDEVIVPHGEPVTVETFXXXXXXXXXXXXXXXX 128
+E L+E Q E+E E+ E + HG PVT+E F
Sbjct: 108 QEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKK 167
Query: 129 XXMPESALTAPKEKKLTGRQWFES 152
M E + KL+G+Q FE+
Sbjct: 168 KRMKEEEQAG--KNKLSGKQLFET 189
>POMBASE|SPCC1393.09c [details] [associations]
symbol:SPCC1393.09c "RWD domain protein, implicated in
translation" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006575 Pfam:PF05773 PROSITE:PS50908
SMART:SM00591 PomBase:SPCC1393.09c GO:GO:0005829 GO:GO:0005634
EMBL:CU329672 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
eggNOG:NOG301416 OrthoDB:EOG4BVW4C PIR:T40957 RefSeq:NP_587967.1
HSSP:Q96BH1 ProteinModelPortal:O94721 PRIDE:O94721
EnsemblFungi:SPCC1393.09c.1 GeneID:2538880 KEGG:spo:SPCC1393.09c
OMA:ENNIGMS NextBio:20800060 Uniprot:O94721
Length = 215
Score = 113 (44.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 40/107 (37%), Positives = 60/107 (56%)
Query: 16 ALIFSH--TEKYPDEPPLLNVK-SLRGIQAGDLKI--LKEKLEQEASENLGMAMIYTLVT 70
+LIF+ +E YPDE P + + S G+ +I LK+ + Q A E LGMAMI++L +
Sbjct: 46 SLIFTCQLSEAYPDEVPDVKITFSEPHPWLGEEEIERLKQVVAQNAEECLGMAMIFSLCS 105
Query: 71 SAKEW----LSERYSQDA-GIDNTGEEELEKDEVIVPHGEPVTVETF 112
AKE L E+ ++ I+ +E E++ HG PVTVE+F
Sbjct: 106 VAKEETNAILIEQSQRETQAIEERHRKEAEQENKKF-HGTPVTVESF 151
>UNIPROTKB|G4MRT5 [details] [associations]
symbol:MGG_04566 "RWD domain-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR006575 Pfam:PF05773
PROSITE:PS50908 SMART:SM00591 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 EMBL:CM001231 RefSeq:XP_003710912.1
ProteinModelPortal:G4MRT5 EnsemblFungi:MGG_04566T0 GeneID:2677929
KEGG:mgr:MGG_04566 Uniprot:G4MRT5
Length = 230
Score = 112 (44.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 43/157 (27%), Positives = 69/157 (43%)
Query: 15 LALIFSHTEKYPDEPPLLNVKSLRGIQAG--------DLKILKEKLEQEASENLGMAMIY 66
+ L + E YPD P L++ + + + D + L +E+ +ENLGMAM++
Sbjct: 49 MLLTVQYPEAYPDVAPRLDLAAPQNSTSSHPYFNVSDDKETLLAGVEETINENLGMAMVF 108
Query: 67 TLVTSAKEWLSERYSQDAGIDNTGEEE-----LEKDEVIVPHGEPVTVETFXXXXXXXXX 121
T+V++ KE +E+ D E+E E++E HGEPV E+F
Sbjct: 109 TVVSALKE-AAEQLVVDRREAKAREQEEAALAAEREENKKFHGEPVNPESFMRWRAGFLK 167
Query: 122 XXXXXXXXXMPESALTAPKEK-----KLTGRQWFESG 153
E K+K KLTG+Q ++ G
Sbjct: 168 EMEEQRLREEEERLAELKKQKVKEPVKLTGKQLWQQG 204
>WB|WBGene00012037 [details] [associations]
symbol:T26E3.4 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR006575 Pfam:PF05773 PROSITE:PS50908 SMART:SM00591
GO:GO:0040010 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
eggNOG:NOG301416 GeneTree:ENSGT00390000009168 EMBL:Z82053
OMA:LDSIYCG PIR:F87952 PIR:T25299 RefSeq:NP_493207.1
ProteinModelPortal:O18131 SMR:O18131 STRING:O18131 PaxDb:O18131
EnsemblMetazoa:T26E3.4 GeneID:173136 KEGG:cel:CELE_T26E3.4
UCSC:T26E3.4 CTD:173136 WormBase:T26E3.4 HOGENOM:HOG000018679
InParanoid:O18131 NextBio:878417 Uniprot:O18131
Length = 240
Score = 112 (44.5 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 42/146 (28%), Positives = 63/146 (43%)
Query: 11 FAVELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILK--EKLEQEASENLGMAMIYTL 68
F VEL + F TE YPDE P++ + + + +I + +KL A ENLGM M++ +
Sbjct: 52 FDVELGIEF--TENYPDEIPIITLNGIEDAFTAE-RIAESIDKLRSVAEENLGMVMVFAI 108
Query: 69 VTSAKEWLSERYS-QDAGIDNTGEEELEKDEVIVP---HGEPVTVETFXXXXXXXXXXXX 124
V++ ++ + E + + E E EK E G VT +TF
Sbjct: 109 VSALQDEIGELVDVKKRAKEEKVEIEKEKKEAESRKKFEGTVVTPDTFRAWKDRFDEERK 168
Query: 125 XXXXXXMPESALTAPKEKKLTGRQWF 150
E A +LTGRQ F
Sbjct: 169 AEIDAA--EKERLASLAGRLTGRQLF 192
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.127 0.351 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 212 173 0.00097 108 3 11 23 0.50 32
31 0.48 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 584 (62 KB)
Total size of DFA: 148 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.24u 0.10s 16.34t Elapsed: 00:00:00
Total cpu time: 16.24u 0.10s 16.34t Elapsed: 00:00:00
Start: Fri May 10 06:56:03 2013 End: Fri May 10 06:56:03 2013