BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028191
(212 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CQK7|RWDD1_MOUSE RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1
Length = 243
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 84/145 (57%), Gaps = 6/145 (4%)
Query: 12 AVELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTS 71
V+ L F+++EKYPDE PL + S ++ D+ + + L +A ENLGM MI+TLVT+
Sbjct: 47 TVQTTLKFTYSEKYPDETPLYEIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTA 106
Query: 72 AKEWLSERYSQ----DAGIDNTGEEELEKDEVIVPHGEPVTVETFLAWRERFEAELALER 127
+E L+E Q E+E E+ E + HG PVT+E FL+W+ +F+AEL +
Sbjct: 107 VQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKKLFHGTPVTIENFLSWKAKFDAELLEIK 166
Query: 128 AKLMPESALTAPKEKKLTGRQWFES 152
K M E + KL+G+Q FE+
Sbjct: 167 KKRMKEEEQAG--KNKLSGKQLFET 189
>sp|Q99ND9|RWDD1_RAT RWD domain-containing protein 1 OS=Rattus norvegicus GN=Rwdd1 PE=2
SV=1
Length = 243
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 84/145 (57%), Gaps = 6/145 (4%)
Query: 12 AVELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTS 71
V+ L F+++EKYPDE PL + S ++ D+ + + L +A ENLGM MI+TLVT+
Sbjct: 47 TVQTTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTA 106
Query: 72 AKEWLSERYSQ----DAGIDNTGEEELEKDEVIVPHGEPVTVETFLAWRERFEAELALER 127
+E L+E Q E+E E+ E + HG PVT+E FL+W+ +F+AEL +
Sbjct: 107 VQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKKLFHGTPVTIENFLSWKAKFDAELLEIK 166
Query: 128 AKLMPESALTAPKEKKLTGRQWFES 152
K M E + KL+G+Q FE+
Sbjct: 167 KKRMKEEEQAG--KNKLSGKQLFET 189
>sp|Q9H446|RWDD1_HUMAN RWD domain-containing protein 1 OS=Homo sapiens GN=RWDD1 PE=1 SV=1
Length = 243
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 83/145 (57%), Gaps = 6/145 (4%)
Query: 12 AVELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTS 71
V+ L F+++EKYPDE PL + S ++ D+ + + L +A ENLGM MI+TLVT+
Sbjct: 47 TVQTTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTA 106
Query: 72 AKEWLSERYSQ----DAGIDNTGEEELEKDEVIVPHGEPVTVETFLAWRERFEAELALER 127
+E L+E Q E+E E+ E + HG PVT+E FL W+ +F+AEL +
Sbjct: 107 VQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIK 166
Query: 128 AKLMPESALTAPKEKKLTGRQWFES 152
K M E + KL+G+Q FE+
Sbjct: 167 KKRMKEEEQAG--KNKLSGKQLFET 189
>sp|O94721|YCF9_SCHPO RWD domain-containing protein C1393.09c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1393.09c PE=4
SV=1
Length = 215
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 23/160 (14%)
Query: 16 ALIFSH--TEKYPDEPPLLNVKSLRG---IQAGDLKILKEKLEQEASENLGMAMIYTLVT 70
+LIF+ +E YPDE P + + + +++ LK+ + Q A E LGMAMI++L +
Sbjct: 46 SLIFTCQLSEAYPDEVPDVKITFSEPHPWLGEEEIERLKQVVAQNAEECLGMAMIFSLCS 105
Query: 71 SAKE-----WLSERYSQDAGIDNTGEEELEKDEVIVPHGEPVTVETFLAWRERFEA---- 121
AKE + + + I+ +E E++ HG PVTVE+F W++ F+A
Sbjct: 106 VAKEETNAILIEQSQRETQAIEERHRKEAEQENKKF-HGTPVTVESFTEWKKGFDAWRNE 164
Query: 122 ELALERAKLMPESALT--------APKEKKLTGRQWFESG 153
+L LE+ + E+ A EK++TGR+ FE+
Sbjct: 165 QLKLEQESKLKEALSAASSSNARKAILEKRMTGRELFENN 204
>sp|Q03768|GIR2_YEAST Protein GIR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GIR2 PE=1 SV=1
Length = 265
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 60 LGMAMIYTLVTSAKE----WLSERYSQDAGIDNTGEEELEKDEVIVPHGEPVTVETFLAW 115
LGM M + L++S KE W SE+ ++ +E EK E HG VT E++L W
Sbjct: 140 LGMQMCFALISSIKERCEQWYSEQLNKLEKQYELEAQEREKKEQAKFHGTKVTRESYLEW 199
Query: 116 RERFEAELAL-ERAKLMPESALTAPKEKKLTGRQWFESG 153
R +F EL L ER ++ A KLTG+Q FE G
Sbjct: 200 RSKFRQELKLDERDQVRRMKAHHG----KLTGKQMFEQG 234
>sp|Q9QZR0|RNF25_MOUSE E3 ubiquitin-protein ligase RNF25 OS=Mus musculus GN=Rnf25 PE=1
SV=2
Length = 456
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 13 VELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSA 72
V L+ +YP E P +++++ RG+ + + + L A E LG AM+Y L+
Sbjct: 61 VCFTLVLRIPVQYPHEVPQISIRNPRGLSDEQIHKISQALGHVAKEGLGTAMLYELIEKG 120
Query: 73 KEWLS 77
KE L+
Sbjct: 121 KEILT 125
>sp|Q5E9N3|RNF25_BOVIN E3 ubiquitin-protein ligase RNF25 OS=Bos taurus GN=RNF25 PE=2 SV=1
Length = 458
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 13 VELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSA 72
V L+ +YP E P +++++ RG+ + + + L A LG AM+Y L+
Sbjct: 62 VCFTLVLQVPTQYPHEVPQISIRNPRGLSDEQIHKISQALSHVAEAGLGTAMLYELIEKG 121
Query: 73 KEWLSE 78
KE L++
Sbjct: 122 KEILTD 127
>sp|Q9P2K8|E2AK4_HUMAN Eukaryotic translation initiation factor 2-alpha kinase 4 OS=Homo
sapiens GN=EIF2AK4 PE=1 SV=3
Length = 1649
Score = 38.9 bits (89), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 25 YPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKEWLSE 78
YPD P + +K+ +G+ + +LK +LE+ A ++ G MI+ L + +LSE
Sbjct: 83 YPDVVPEIELKNAKGLSNESVNLLKSRLEELAKKHCGEVMIFELAYHVQSFLSE 136
>sp|Q6NW29|RWDD4_HUMAN RWD domain-containing protein 4 OS=Homo sapiens GN=RWDD4 PE=1 SV=3
Length = 188
Score = 38.1 bits (87), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 11 FAVELALIFSHTEKYPDEPPLLNVKSL--RGIQAGDLKILKEKLEQEASENLGMAMIYTL 68
F +E+ S TE YP PP+L++ + I + + + KL++ NLG AM YTL
Sbjct: 45 FLIEI----SWTETYPQTPPILSMNAFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTL 100
Query: 69 VTSAKE 74
AK+
Sbjct: 101 FEYAKD 106
>sp|Q96BH1|RNF25_HUMAN E3 ubiquitin-protein ligase RNF25 OS=Homo sapiens GN=RNF25 PE=1
SV=1
Length = 459
Score = 37.7 bits (86), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 13 VELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSA 72
V L+ +YP E P +++++ RG+ + + + L A LG AM+Y L+
Sbjct: 62 VCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGLGTAMLYELIEKG 121
Query: 73 KEWLSE 78
KE L++
Sbjct: 122 KEILTD 127
>sp|Q9LX30|GCN2_ARATH Probable serine/threonine-protein kinase GCN2 OS=Arabidopsis
thaliana GN=GCN2 PE=2 SV=2
Length = 1241
Score = 37.4 bits (85), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 13 VELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENL--GMAMIYTLVT 70
+ LI YP + P L + +G+ D + L LE +A+ N G MI+ LV
Sbjct: 80 ISAMLIVRCLPGYPYKCPKLQITPEQGLTTADAEKLLSLLEDQANSNAREGRVMIFNLVE 139
Query: 71 SAKEWLSE 78
+A+E+LSE
Sbjct: 140 AAQEFLSE 147
>sp|Q9QZ05|E2AK4_MOUSE Eukaryotic translation initiation factor 2-alpha kinase 4 OS=Mus
musculus GN=Eif2ak4 PE=1 SV=2
Length = 1648
Score = 37.4 bits (85), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 13 VELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSA 72
V++ L YPD P + +K+ +G+ + +LK LE+ A + G MI+ L
Sbjct: 71 VQVELQVKCPPTYPDVVPEIELKNAKGLSNESVNLLKSHLEELAKKQCGEVMIFELAHHV 130
Query: 73 KEWLSE 78
+ +LSE
Sbjct: 131 QSFLSE 136
>sp|Q569B7|RWDD4_RAT RWD domain-containing protein 4 OS=Rattus norvegicus GN=Rwdd4 PE=2
SV=1
Length = 188
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 19 FSHTEKYPDEPPLLNVKSL--RGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSAKE 74
S TE YP PP++++ + I + + + KL++ NLG AM YTL AK+
Sbjct: 49 ISWTETYPQTPPVISMNAFFNNTISSAVKQSILAKLQEAVEVNLGTAMTYTLFEYAKD 106
>sp|Q75JN1|IFKC_DICDI Probable serine/threonine-protein kinase ifkC OS=Dictyostelium
discoideum GN=ifkC PE=3 SV=1
Length = 1700
Score = 34.7 bits (78), Expect = 0.51, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 13 VELALIFSHTEKYPDEPPLLNVKSLRGIQAGDLKILKEKLEQEASENLGMAMIYTLVTSA 72
V + L+ EKYP P + V +G+ L+EKL +E+ +G MI+ L A
Sbjct: 131 VSIYLVVGFPEKYPVVLPSIQVLVNKGLPQKKAIELEEKLIRESQGKIGNIMIFDLCEIA 190
Query: 73 KEWLSE 78
K++L+E
Sbjct: 191 KDFLNE 196
>sp|Q7JWR9|ZC3HF_DROME Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila
melanogaster GN=CG8635 PE=1 SV=1
Length = 404
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 8/54 (14%)
Query: 102 PHGEPVTVETFLAWRERFEAELALERAKLMPE-----SALTAPKEKKLTGRQWF 150
P+ VT+E+FLAW++R ++A ++AKL E S + K+ ++GR+ F
Sbjct: 235 PNQTRVTLESFLAWKKR---KIAEKKAKLAAEEERKKSDFSKGKQFGISGREMF 285
>sp|Q28Y69|ZC3HF_DROPS Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA21225 PE=3 SV=1
Length = 406
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 8/49 (16%)
Query: 107 VTVETFLAWRERFEAELALERAKLMPE-----SALTAPKEKKLTGRQWF 150
VT+ETFLAW++R +L ++AK++ E S + K+ ++GR+ F
Sbjct: 241 VTLETFLAWKKR---KLQEKKAKMVAEEERKKSDFSKGKQFGISGREMF 286
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.129 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,671,623
Number of Sequences: 539616
Number of extensions: 3449515
Number of successful extensions: 32727
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 26284
Number of HSP's gapped (non-prelim): 4147
length of query: 212
length of database: 191,569,459
effective HSP length: 112
effective length of query: 100
effective length of database: 131,132,467
effective search space: 13113246700
effective search space used: 13113246700
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)