BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028194
(212 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1
SV=1
Length = 516
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 32/212 (15%)
Query: 7 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVE-STKGTRTSSGTFISASED 65
+PR + F + S E+ +++ AK RL S+ + ET + +T R S ++S E
Sbjct: 316 KPRIVRFLDIISDEEIETVKELAKPRL--SRATVHDPETGKLTTAHYRVSKSAWLSGYE- 372
Query: 66 KTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQ 117
+ ++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 373 -SPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTG-- 429
Query: 118 MSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFP 177
R+A++L Y+SDV GG T+FP +G V P++G + +Y+LFP
Sbjct: 430 --NRIATWLFYMSDVSAGGATVFP---------------EVGASVWPKKGTAVFWYNLFP 472
Query: 178 NGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209
+G D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct: 473 SGEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 504
>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1
PE=2 SV=2
Length = 534
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 32/212 (15%)
Query: 7 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVE-STKGTRTSSGTFISASED 65
+PR + F + S + + + AK RL S+ + ET + +T R S ++S ED
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRL--SRATVHDPETGKLTTAQYRVSKSAWLSGYED 391
Query: 66 KTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQ 117
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 392 P--VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTG-- 447
Query: 118 MSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFP 177
R+A++L Y+SDV GG T+FP +G V P++G + +Y+LF
Sbjct: 448 --NRIATWLFYMSDVSAGGATVFP---------------EVGASVWPKKGTAVFWYNLFA 490
Query: 178 NGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209
+G D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct: 491 SGEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522
>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2
SV=2
Length = 534
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 7 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDK 66
+PR + F + S + + + AK RL+ + ++ +E+ R S ++S ED
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVH-YRISKSAWLSGYEDP 392
Query: 67 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 118
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 393 --VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTG--- 447
Query: 119 SQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPN 178
R+A++L Y+SDV GG T+FP +G V P++G + +Y+LF +
Sbjct: 448 -NRIATWLFYMSDVSAGGATVFP---------------EVGASVWPKKGTAVFWYNLFAS 491
Query: 179 GTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209
G D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct: 492 GEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522
>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2
SV=1
Length = 534
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 7 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDK 66
+PR + F + S + + + AK RL+ + ++ +E+ R S ++S E+
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVH-YRISKSAWLSGYENP 392
Query: 67 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 118
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 393 --VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTG--- 447
Query: 119 SQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPN 178
R+A++L Y+SDV GG T+FP +G V P++G + +Y+LF +
Sbjct: 448 -NRIATWLFYMSDVSAGGATVFP---------------EVGASVWPKKGTAVFWYNLFAS 491
Query: 179 GTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209
G D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct: 492 GEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522
>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1
SV=2
Length = 534
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 7 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDK 66
+PR + F + S + + + AK RL+ + ++ +E+ R S ++S E+
Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVH-YRISKSAWLSGYENP 392
Query: 67 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 118
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 393 --VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTG--- 447
Query: 119 SQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPN 178
R+A++L Y+SDV GG T+FP +G V P++G + +Y+LF +
Sbjct: 448 -NRIATWLFYMSDVSAGGATVFP---------------EVGASVWPKKGTAVFWYNLFAS 491
Query: 179 GTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209
G D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct: 492 GEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522
>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1
SV=1
Length = 534
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 7 RPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDK 66
+PR + F + S + + + AK RL+ + ++ +E+ R S ++S E+
Sbjct: 334 KPRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVH-YRISKSAWLSGYENP 392
Query: 67 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 118
++ I +I T L + E V Y +G +Y+ H+D AF G
Sbjct: 393 --VVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTG--- 447
Query: 119 SQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPN 178
R+A++L Y+SDV GG T+FP +G V P++G + +Y+LF +
Sbjct: 448 -NRIATWLFYMSDVLAGGATVFP---------------EVGASVWPKKGTAVFWYNLFAS 491
Query: 179 GTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209
G D ++ H +CPV+ G KWV+ KW+ ++ Q
Sbjct: 492 GEGDYSTRHAACPVLVGNKWVSNKWLHERGQ 522
>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2
SV=1
Length = 534
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 24/204 (11%)
Query: 8 PRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGET-VESTKGTRTSSGTFISASEDK 66
P + + + S E+ + I AK +L ++ +R +T V + R S +++ ED
Sbjct: 337 PHIVRYYDVMSDEEIEKIKQLAKPKL--ARATVRDPKTGVLTVASYRVSKSSWLE--EDD 392
Query: 67 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMS---QRLA 123
++ + ++ + T L E V Y +G +Y+ H+D F+ + + RLA
Sbjct: 393 DPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFD-FSRRPFDSTLKSEGNRLA 451
Query: 124 SFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDR 183
+FL Y+SDVE GG T+FP D+ G + P++G + +Y+LF +G D
Sbjct: 452 TFLNYMSDVEAGGATVFP-----------DF----GAAIWPKKGTAVFWYNLFRSGEGDY 496
Query: 184 TSLHGSCPVIKGEKWVATKWIRDQ 207
+ H +CPV+ G KWV+ KW ++
Sbjct: 497 RTRHAACPVLVGCKWVSNKWFHER 520
>sp|Q6W3F0|P4HA3_MOUSE Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2
SV=1
Length = 542
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 2 QVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFIS 61
+V+ RP + +F S E+ Q I A+ L+ S +A GE + R S ++
Sbjct: 338 EVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVA--SGEKQLQVE-YRISKSAWLK 394
Query: 62 ASEDKTGILELIEHKIARATMLP--QTHGEAFNVLRYEIGQKYDSHYD-AFNPAE--YGP 116
+ D +L ++H+IA T L + E V+ Y IG Y+ H+D A +P+ Y
Sbjct: 395 DTVDP--MLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRM 452
Query: 117 QMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLF 176
+ R+A+F++YLS VE GG T F + N V + L +++L
Sbjct: 453 KSGNRVATFMIYLSSVEAGGATAFIYGN---------------FSVPVVKNAALFWWNLH 497
Query: 177 PNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209
+G D +LH CPV+ G+KWVA KWI + Q
Sbjct: 498 RSGEGDGDTLHAGCPVLVGDKWVANKWIHEYGQ 530
>sp|Q75UG4|P4HA3_BOVIN Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2
SV=1
Length = 544
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 2 QVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFIS 61
+V+ P + + +F S + Q+I A+ L+ S +A GE + R S ++
Sbjct: 340 EVIHLEPYVVLYHDFVSDAEAQTIRGLAEPWLQRSVVA--SGEKQLPVE-YRISKSAWLK 396
Query: 62 ASEDKTGILELIEHKIARATMLP--QTHGEAFNVLRYEIGQKYDSHYD-AFNPAE--YGP 116
+ D +L ++H+IA T L + E V+ Y IG Y+ H+D A +P+ Y
Sbjct: 397 DTVDP--VLVTLDHRIAALTGLDVQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRM 454
Query: 117 QMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLF 176
R+A+F++YLS VE GG T F + N V + L +++L
Sbjct: 455 NSGNRVATFMIYLSSVEAGGATAFIYGN---------------FSVPVVKNAALFWWNLH 499
Query: 177 PNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209
+G D +LH +CPV+ G+KWVA KWI + Q
Sbjct: 500 RSGEGDGDTLHAACPVLVGDKWVANKWIHEYGQ 532
>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans
GN=phy-2 PE=1 SV=1
Length = 539
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 32/218 (14%)
Query: 1 MQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTF- 59
+++L + P A+ F N + + I A +LK + TV+++K T+
Sbjct: 318 VEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRA--------TVQNSKTGELEHATYR 369
Query: 60 ISASE----DKTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYG 115
IS S D +++ + +I T L Q E V Y +G YD H+D E
Sbjct: 370 ISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKN 429
Query: 116 P----QMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLL 171
R+A+ L Y+S E GG T+F +G V P + D L
Sbjct: 430 AFKTLNTGNRIATVLFYMSQPERGGATVF---------------NHLGTAVFPSKNDALF 474
Query: 172 FYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209
+Y+L +G D + H +CPV+ G KWV+ KWI ++ Q
Sbjct: 475 WYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWIHEKGQ 512
>sp|Q7Z4N8|P4HA3_HUMAN Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1
SV=1
Length = 544
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 2 QVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFIS 61
+V+ P + +F S + Q I A+ L+ S +A GE + R S ++
Sbjct: 340 EVIHLEPYIALYHDFVSDSEAQKIRELAEPWLQRSVVA--SGEKQLQVE-YRISKSAWLK 396
Query: 62 ASEDKTGILELIEHKIARATMLP--QTHGEAFNVLRYEIGQKYDSHYD-AFNPAE--YGP 116
+ D L + H+IA T L + E V+ Y IG Y+ H+D A +P+ Y
Sbjct: 397 DTVDPK--LVTLNHRIAALTGLDVRPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRM 454
Query: 117 QMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLF 176
+ R+A+F++YLS VE GG T F + N L V R L +++L
Sbjct: 455 KSGNRVATFMIYLSSVEAGGATAFIYAN---------------LSVPVVRNAALFWWNLH 499
Query: 177 PNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209
+G D +LH CPV+ G+KWVA KWI + Q
Sbjct: 500 RSGEGDSDTLHAGCPVLVGDKWVANKWIHEYGQ 532
>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1
SV=1
Length = 535
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 8 PRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGET-VESTKGTRTSSGTFISASEDK 66
P + + + S E+ + I AK +L ++ +R +T V + R S +++ ED
Sbjct: 336 PHIVRYYDVMSDEEIERIKEIAKPKL--ARATVRDPKTGVLTVASYRVSKSSWLE--EDD 391
Query: 67 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGP----QMSQRL 122
++ + ++ T L E V Y +G +Y+ H+D E R+
Sbjct: 392 DPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRV 451
Query: 123 ASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTID 182
A+FL Y+SDVE GG T+FP +G + P++G + +Y+L +G D
Sbjct: 452 ATFLNYMSDVEAGGATVFP---------------DLGAAIWPKKGTAVFWYNLLRSGEGD 496
Query: 183 RTSLHGSCPVIKGEKWVATKWIRDQEQ 209
+ H +CPV+ G KWV+ KW ++ Q
Sbjct: 497 YRTRHAACPVLVGCKWVSNKWFHERGQ 523
>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2
SV=1
Length = 537
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 8 PRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGET-VESTKGTRTSSGTFISASEDK 66
P + + + S E+ + I AK +L ++ +R +T V + R S +++ ED
Sbjct: 338 PHIVRYYDVMSDEEIERIKEIAKPKL--ARATVRDPKTGVLTVASYRVSKSSWLE--EDD 393
Query: 67 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYD--------AFNPAEYGPQM 118
++ + ++ T L E V Y +G +Y+ H+D AF G
Sbjct: 394 DPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTG--- 450
Query: 119 SQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPN 178
R+A+FL Y+SDVE GG T+FP +G + P++G + +Y+L +
Sbjct: 451 -NRVATFLNYMSDVEAGGATVFP---------------DLGAAIWPKKGTAVFWYNLLRS 494
Query: 179 GTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209
G D + H +CPV+ G KWV+ KW ++ Q
Sbjct: 495 GEGDYRTRHAACPVLVGCKWVSNKWFHERGQ 525
>sp|Q6W3E9|P4HA3_RAT Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3
PE=2 SV=1
Length = 544
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 2 QVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFIS 61
+V+ RP + +F S E+ Q I A+ L+ S +A GE + R S ++
Sbjct: 340 EVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRSVVA--SGEKQLQVE-YRISKSAWLK 396
Query: 62 ASEDKTGILELIEHKIARATMLP--QTHGEAFNVLRYEIGQKYDSHYD-AFNPAE--YGP 116
+ D +L ++ +IA T L + E V+ Y IG Y+ H+D A +P+ Y
Sbjct: 397 DTVDP--VLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYKM 454
Query: 117 QMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLF 176
+ R A+ ++YLS VE GG T F + N V + L +++L
Sbjct: 455 KSGNRAATLMIYLSSVEAGGATAFIYGN---------------FSVPVVKNAALFWWNLH 499
Query: 177 PNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209
+G D +LH CPV+ G+KWVA KWI + Q
Sbjct: 500 RSGEGDDDTLHAGCPVLVGDKWVANKWIHEYGQ 532
>sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L593 PE=1 SV=1
Length = 242
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 30/200 (15%)
Query: 15 NFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDKTGILELIE 74
N + +CQ I+ A +L SQ+ + K R S +IS + +++ I
Sbjct: 65 NLINPTKCQEIMQFANGKLFDSQV------LSGTDKNIRNSQQMWISKN---NPMVKPIF 115
Query: 75 HKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAF-----NPAEYGPQMSQRLASFLLYL 129
I R +P + E V+RY Q Y+ H+D+ +E+ + QR+ + L+YL
Sbjct: 116 ENICRQFNVPFDNAEDLQVVRYLPNQYYNEHHDSCCDSSKQCSEFIERGGQRILTVLIYL 175
Query: 130 SDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGT-IDRTSLHG 188
++ G T FP N K KP+ GD L+FY L N SLH
Sbjct: 176 NNEFSDGHTYFPNLNQ---------------KFKPKTGDALVFYPLANNSNKCHPYSLHA 220
Query: 189 SCPVIKGEKWVATKWIRDQE 208
PV GEKW+A W R+++
Sbjct: 221 GMPVTSGEKWIANLWFRERK 240
>sp|Q8BG58|P4HTM_MOUSE Transmembrane prolyl 4-hydroxylase OS=Mus musculus GN=P4htm PE=2
SV=1
Length = 503
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 85/196 (43%), Gaps = 42/196 (21%)
Query: 47 ESTKGTRTSSGTFISASEDKTGILELIEHKIARATML-PQT--HGEAFNVLRYEIGQKYD 103
ES + R S T++ E ++ I ++ R T L P+ E V+RY G Y
Sbjct: 268 ESNELVRNSHHTWLHQGEGAHHVMRAIRQRVLRLTRLSPEIVEFSEPLQVVRYGEGGHYH 327
Query: 104 SHYDA-------------FNPAEYGP-QMSQRLASFLLYLSDVEEGGETMFPFENGIFLD 149
+H D+ E P + S R + L YL++V GGET+FP + +
Sbjct: 328 AHVDSGPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVAD----N 383
Query: 150 SGYDYKKCI----------------GLKVKPRRGDGLLFYSLFPNGT-----IDRTSLHG 188
YD I L+VKP++G + +Y+ P+G +D SLHG
Sbjct: 384 RTYDEMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGEVDDYSLHG 443
Query: 189 SCPVIKGEKWVATKWI 204
C V +G KW+A WI
Sbjct: 444 GCLVTRGTKWIANNWI 459
>sp|Q9NXG6|P4HTM_HUMAN Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1
SV=2
Length = 502
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 42/196 (21%)
Query: 47 ESTKGTRTSSGTFISASEDKTGILELIEHKIARATML-PQT--HGEAFNVLRYEIGQKYD 103
ES++ R S T++ E I+ I ++ R T L P+ E V+RY G Y
Sbjct: 267 ESSELVRNSHHTWLYQGEGAHHIMRAIRQRVLRLTRLSPEIVELSEPLQVVRYGEGGHYH 326
Query: 104 SHYDA-------------FNPAEYGP-QMSQRLASFLLYLSDVEEGGETMFPFENGIFLD 149
+H D+ E P + S R + L YL++V GGET+FP + +
Sbjct: 327 AHVDSGPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVAD----N 382
Query: 150 SGYDYKKCI----------------GLKVKPRRGDGLLFYSLFPNG-----TIDRTSLHG 188
YD I L+VKP++G + +Y+ P+G +D SLHG
Sbjct: 383 RTYDEMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGDVDDYSLHG 442
Query: 189 SCPVIKGEKWVATKWI 204
C V +G KW+A WI
Sbjct: 443 GCLVTRGTKWIANNWI 458
>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans
GN=dpy-18 PE=1 SV=2
Length = 559
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 30/215 (13%)
Query: 1 MQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFI 60
+++ + P A+ F + S ++ +I AK +L + + +S G ++ I
Sbjct: 321 VEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVH-------DSVTGKLVTATYRI 373
Query: 61 SAS----EDKTGILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGP 116
S S E + ++E + +I T L E + Y IG YD H+D E
Sbjct: 374 SKSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKS 433
Query: 117 QMS----QRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLF 172
S R+A+ L Y+S GG T+F L P + D L +
Sbjct: 434 FESLGTGNRIATVLFYMSQPSHGGGTVFTEAKSTIL---------------PTKNDALFW 478
Query: 173 YSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQ 207
Y+L+ G + + H +CPV+ G KWV+ KWI ++
Sbjct: 479 YNLYKQGDGNPDTRHAACPVLVGIKWVSNKWIHEK 513
>sp|Q13JL5|Y7756_BURXL PKHD-type hydroxylase Bxeno_B2756 OS=Burkholderia xenovorans
(strain LB400) GN=Bxeno_B2756 PE=3 SV=1
Length = 227
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 39/205 (19%)
Query: 11 LYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFIS-----ASED 65
L+ PN +AEQ + + ++RL + A G +G I+ A E
Sbjct: 3 LHIPNVLNAEQLRIV----RERLDTAGDAWVDGRATAGYQGAPVKRNQQIAEHTPIAREL 58
Query: 66 KTGILELIE-HKIARATMLP-QTHGEAFNVLRYEIGQKYDSHYD-AFNPAEYGPQMSQRL 122
IL IE + + +++LP Q + FN RYE G ++ SH D A G ++ +
Sbjct: 59 GDVILASIERNPLFISSVLPNQVYPPLFN--RYEGGMQFGSHVDGAVRVLPNGVKLRTDV 116
Query: 123 ASFLLYLSDVEE--GGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGT 180
S L++SD + GGE + G+ +VK GD +++ +
Sbjct: 117 -SVTLFISDPADYDGGELVIEDTYGV-------------QQVKLPAGDMIVYPA------ 156
Query: 181 IDRTSLHGSCPVIKGEKWVATKWIR 205
TSLH PV +G + + W++
Sbjct: 157 ---TSLHQVTPVTRGVRVASFFWVQ 178
>sp|B7KDQ8|Y1929_CYAP7 PKHD-type hydroxylase PCC7424_1929 OS=Cyanothece sp. (strain PCC
7424) GN=PCC7424_1929 PE=3 SV=1
Length = 220
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 27/121 (22%)
Query: 95 RYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDY 154
RYE+G Y +H D G + SF L+L+ ++ +E G + G D
Sbjct: 85 RYEVGMSYGTHIDN---GLMGSNFWRSDVSFTLFLTAPKD-------YEGGELVIEGADD 134
Query: 155 KKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKW----IRDQEQH 210
+K L + + +L Y P+ T LH PV KG + VA W +RD +
Sbjct: 135 EKAYKLDL-----NSVLVY---PSST-----LHRVEPVTKGTRLVAVGWVQSLVRDASER 181
Query: 211 E 211
E
Sbjct: 182 E 182
>sp|B4RYP8|Y3560_ALTMD PKHD-type hydroxylase MADE_1017445/MADE_1018490 OS=Alteromonas
macleodii (strain DSM 17117 / Deep ecotype)
GN=MADE_1017445 PE=3 SV=1
Length = 226
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 31/128 (24%)
Query: 91 FNVLRYEIGQKYDSHYDA-FNPAEYGPQMSQRLASFLLYLSDVE--EGGETMFPFENGIF 147
FN RY Q Y H DA P + + S ++L+ E EGGE +
Sbjct: 83 FN--RYSESQTYGYHVDAAIMRIPNTPDVLRSDMSMTVFLTPKEDYEGGE--------LV 132
Query: 148 LDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIR-- 205
+ +G+ +K VK G +L+ S +SLH PV KGE+ A WI+
Sbjct: 133 IQTGFGEQK-----VKCDAGSAILYPS---------SSLHKVTPVTKGERIAAITWIQSM 178
Query: 206 --DQEQHE 211
DQ+ E
Sbjct: 179 VSDQQMRE 186
>sp|B2TA88|Y7102_BURPP PKHD-type hydroxylase Bphyt_7102 OS=Burkholderia phytofirmans
(strain DSM 17436 / PsJN) GN=Bphyt_7102 PE=3 SV=1
Length = 227
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 39/205 (19%)
Query: 11 LYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFIS-----ASED 65
L+ PN +AEQ + + ++RL + A G +G I+ A E
Sbjct: 3 LHIPNVLNAEQLRLV----RERLDQAGDAWVDGRATAGYQGAPVKRNQQIAEHTPVAREL 58
Query: 66 KTGILELIE-HKIARATMLP-QTHGEAFNVLRYEIGQKYDSHYD-AFNPAEYGPQMSQRL 122
IL IE + + + +LP Q + FN RYE G ++ SH D A G ++ +
Sbjct: 59 GDVILASIERNPLFISAVLPNQVYPPLFN--RYEGGMQFGSHVDGAVRVLPNGVKLRTDV 116
Query: 123 ASFLLYLSDVEE--GGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGT 180
S L++SD + GGE + G+ +VK GD +++ +
Sbjct: 117 -SVTLFISDPADYDGGELVIEDTYGV-------------QQVKLPAGDMIVYPA------ 156
Query: 181 IDRTSLHGSCPVIKGEKWVATKWIR 205
TSLH PV +G + + W++
Sbjct: 157 ---TSLHQVTPVTRGARIASFFWVQ 178
>sp|B8IJ69|Y1077_METNO PKHD-type hydroxylase Mnod_1077 OS=Methylobacterium nodulans
(strain ORS2060 / LMG 21967) GN=Mnod_1077 PE=3 SV=1
Length = 227
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 76/203 (37%), Gaps = 40/203 (19%)
Query: 11 LYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDKTGIL 70
++ PN + + IA + RL+ + G + R I D L
Sbjct: 3 VHVPNVLTPAE----IALCRARLEAGEWI--DGRATAGQQAARAKHNLQIPEDSDTAREL 56
Query: 71 -ELIEHKIAR-----ATMLP-QTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRL- 122
ELI + R A LP + FN RY++G + +H D A G M R
Sbjct: 57 GELILRALGRSPLFNAAALPLRVLPPLFN--RYDVGMSFRNHVDGAVRAIPGAGMRLRAD 114
Query: 123 ASFLLYLSDVE--EGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGT 180
S L+L+D + EGGE + G VK GD +++ +
Sbjct: 115 VSTTLFLTDPDAYEGGELVIEDTFGSH-------------AVKLPAGDMIVYPA------ 155
Query: 181 IDRTSLHGSCPVIKGEKWVATKW 203
TSLH P+ +G +W A W
Sbjct: 156 ---TSLHRVEPITRGSRWSAFFW 175
>sp|Q0AP20|Y1675_MARMM PKHD-type hydroxylase Mmar10_1675 OS=Maricaulis maris (strain
MCS10) GN=Mmar10_1675 PE=3 SV=1
Length = 219
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 33/117 (28%)
Query: 93 VLRYEIGQKYDSHYDAFNPAEYGPQMSQRLA--SFLLYLSDVE--EGGETMFPFENGIFL 148
V RY G Y H D M R A SF L+LSD + +GGE + +G
Sbjct: 83 VSRYRDGMAYGPHID-------DALMGGRRADLSFTLFLSDPDSYDGGELVMDGPDG--- 132
Query: 149 DSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIR 205
++K GD +++ + +++H PV +GE+ W+R
Sbjct: 133 ----------ETEIKLAAGDAVVYAT---------SAIHQVAPVTRGERVAVVGWVR 170
>sp|A0KT36|Y717_SHESA PKHD-type hydroxylase Shewana3_0717 OS=Shewanella sp. (strain
ANA-3) GN=Shewana3_0717 PE=3 SV=1
Length = 224
Score = 30.8 bits (68), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 26/142 (18%)
Query: 72 LIEHKIARATMLP-QTHGEAFNVLRYEIGQKYDSHYD-AFNPAEYGPQMSQRLASFLLYL 129
L+ H + + LP Q + FN RY+ G+ + H D A G + A+ L
Sbjct: 64 LLAHPLFVSAALPLQFYPPLFN--RYQGGETFGYHIDNAIRSTSEGMVRTDLSATLFLSE 121
Query: 130 SDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGS 189
D +GGE + + Y + +K G +L+ S TSLH
Sbjct: 122 PDTYQGGE--------LVIQDTYGQQS-----IKLAAGSLVLYPS---------TSLHQV 159
Query: 190 CPVIKGEKWVATKWIRDQEQHE 211
PV GE+ A W++ + E
Sbjct: 160 TPVTSGERTAAFMWLQSMVRDE 181
>sp|A2C3W6|Y1619_PROM1 PKHD-type hydroxylase NATL1_16191 OS=Prochlorococcus marinus
(strain NATL1A) GN=NATL1_16191 PE=3 SV=1
Length = 221
Score = 30.4 bits (67), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 32/145 (22%)
Query: 71 ELIEHKIARATMLPQ-THGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYL 129
++I + + ++ LP HG F + +G Y SH D NP Y P L SF L+L
Sbjct: 65 KIISNPLLKSFTLPSLIHGVMFT--QSLVGHSYGSHID--NP--YMPSGRSDL-SFTLFL 117
Query: 130 SDVE--EGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLH 187
+ E EGGE N K+K G+ +++ S T LH
Sbjct: 118 NAPEDYEGGELCIQTINKTE-------------KIKLSAGEIIIYPS---------TQLH 155
Query: 188 GSCPVIKGEKWVATKWIRDQEQHED 212
V GE+ V WI+ Q+ +
Sbjct: 156 SVAEVKDGERHVCVGWIQSYVQNNE 180
>sp|Q0HF55|Y3244_SHESM PKHD-type hydroxylase Shewmr4_3244 OS=Shewanella sp. (strain MR-4)
GN=Shewmr4_3244 PE=3 SV=1
Length = 224
Score = 30.4 bits (67), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 26/142 (18%)
Query: 72 LIEHKIARATMLP-QTHGEAFNVLRYEIGQKYDSHYD-AFNPAEYGPQMSQRLASFLLYL 129
L+ H + + LP Q + FN RY+ G+ + H D A G + A+ L
Sbjct: 64 LLAHPLFVSAALPLQFYPPLFN--RYQGGETFGYHIDNAIRSTSEGMVRTDLSATLFLSE 121
Query: 130 SDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGS 189
D +GGE + + Y + +K G +L+ S TSLH
Sbjct: 122 PDTYQGGE--------LVIQDTYGQQS-----IKLAAGSLVLYPS---------TSLHQV 159
Query: 190 CPVIKGEKWVATKWIRDQEQHE 211
PV GE+ A W++ + E
Sbjct: 160 TPVTSGERTAAFMWLQSMVRDE 181
>sp|C1DC72|Y496_LARHH PKHD-type hydroxylase LHK_00496 OS=Laribacter hongkongensis (strain
HLHK9) GN=LHK_00496 PE=3 SV=1
Length = 226
Score = 30.4 bits (67), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 91 FNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRL---ASFLLYLSDVEE--GGETMFPFENG 145
FN RYE G + +H D N Y P + + S L+LSD +E GGE + G
Sbjct: 84 FN--RYEGGMNFGNHVD--NALRYLPGTTDAVRTDVSATLFLSDPDEYDGGELVVEDTYG 139
Query: 146 IFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIR 205
+ VK GD +++ S TSLH PV +G + + WI+
Sbjct: 140 VH-------------SVKLPAGDIVVYPS---------TSLHRVEPVSRGARVASFMWIQ 177
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,698,354
Number of Sequences: 539616
Number of extensions: 3362318
Number of successful extensions: 7143
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 7092
Number of HSP's gapped (non-prelim): 43
length of query: 212
length of database: 191,569,459
effective HSP length: 112
effective length of query: 100
effective length of database: 131,132,467
effective search space: 13113246700
effective search space used: 13113246700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)