Query 028194
Match_columns 212
No_of_seqs 147 out of 1173
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 12:24:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028194.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028194hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jig_A Prolyl-4 hydroxylase; h 100.0 1E-53 3.5E-58 346.0 19.1 203 1-209 13-220 (224)
2 3itq_A Prolyl 4-hydroxylase, a 100.0 3.8E-54 1.3E-58 345.4 9.9 183 1-208 32-214 (216)
3 3dkq_A PKHD-type hydroxylase S 100.0 5.5E-37 1.9E-41 249.4 7.9 175 4-211 15-200 (243)
4 2hbt_A EGL nine homolog 1; pro 99.9 5.1E-27 1.7E-31 191.8 16.6 172 8-208 26-215 (247)
5 3kt7_A PKHD-type hydroxylase T 99.5 8.9E-13 3.1E-17 117.7 15.7 177 6-211 31-233 (633)
6 2rg4_A Uncharacterized protein 98.9 2.3E-09 8E-14 85.4 8.4 95 91-205 105-206 (216)
7 2rdq_A 1-deoxypentalenic acid 98.1 5.5E-06 1.9E-10 68.1 6.1 182 9-207 32-253 (288)
8 2fct_A Syringomycin biosynthes 98.0 5.3E-05 1.8E-09 63.0 10.5 182 8-204 21-258 (313)
9 2a1x_A Phytanoyl-COA dioxygena 97.9 0.00016 5.5E-09 59.9 12.8 180 9-206 35-254 (308)
10 2iuw_A Alkylated repair protei 97.6 0.0013 4.4E-08 52.8 12.4 169 9-202 41-226 (238)
11 3emr_A ECTD; double stranded b 97.5 0.0001 3.5E-09 61.5 5.6 174 9-205 47-267 (310)
12 3gja_A CYTC3; halogenase, beta 97.4 0.00031 1.1E-08 58.8 7.5 175 9-202 24-258 (319)
13 3s57_A Alpha-ketoglutarate-dep 97.3 0.0071 2.4E-07 47.3 13.3 178 2-202 4-199 (204)
14 3i3q_A Alpha-ketoglutarate-dep 97.0 0.019 6.4E-07 45.1 13.1 108 69-202 85-199 (211)
15 3tht_A Alkylated DNA repair pr 96.9 0.0055 1.9E-07 51.8 10.0 143 4-173 107-259 (345)
16 2opw_A Phyhd1 protein; double- 96.8 0.0036 1.2E-07 51.1 7.6 93 99-204 150-264 (291)
17 3nnf_A CURA; non-HAEM Fe(II)/a 95.8 0.064 2.2E-06 44.2 9.6 127 10-140 42-174 (344)
18 1w9y_A 1-aminocyclopropane-1-c 93.5 0.3 1E-05 40.5 8.3 87 90-205 156-252 (319)
19 1dcs_A Deacetoxycephalosporin 91.1 0.94 3.2E-05 37.3 8.3 89 89-205 157-266 (311)
20 1gp6_A Leucoanthocyanidin diox 91.1 0.88 3E-05 38.2 8.3 87 90-206 211-307 (356)
21 3oox_A Putative 2OG-Fe(II) oxy 87.8 2.6 8.8E-05 34.6 8.6 102 75-205 147-270 (312)
22 1odm_A Isopenicillin N synthas 86.5 2.7 9.3E-05 34.8 8.1 45 159-205 239-287 (331)
23 3pl0_A Uncharacterized protein 84.1 0.93 3.2E-05 36.4 3.9 55 120-194 171-226 (254)
24 3on7_A Oxidoreductase, iron/as 80.4 5 0.00017 32.4 7.1 87 90-205 151-253 (280)
25 1nx8_A CARC, carbapenem syntha 68.1 4.5 0.00015 32.1 3.8 40 158-205 230-271 (273)
26 3dqy_A Toluene 1,2-dioxygenase 67.0 8.7 0.0003 25.8 4.6 49 125-195 4-52 (106)
27 2og5_A Putative oxygenase; non 65.3 4.3 0.00015 33.9 3.2 40 159-206 291-334 (357)
28 1otj_A Alpha-ketoglutarate-dep 64.3 6.9 0.00024 31.2 4.2 41 159-207 235-276 (283)
29 2wbq_A L-arginine beta-hydroxy 64.2 5 0.00017 33.4 3.4 40 159-206 296-339 (358)
30 4aiv_A Probable nitrite reduct 58.8 19 0.00064 24.9 5.2 55 120-195 7-62 (119)
31 1ds1_A Clavaminate synthase 1; 58.3 6.8 0.00023 32.0 3.2 40 159-206 259-302 (324)
32 2dbn_A Hypothetical protein YB 57.0 4 0.00014 35.5 1.5 37 160-205 365-403 (461)
33 3o2g_A Gamma-butyrobetaine dio 55.0 8 0.00027 32.7 3.1 41 158-206 327-370 (388)
34 2i7f_A Ferredoxin component of 53.8 26 0.00089 23.4 5.1 51 123-195 4-55 (108)
35 3rcq_A Aspartyl/asparaginyl be 52.6 54 0.0018 25.0 7.2 77 90-202 103-179 (197)
36 2pp6_A Gifsy-2 prophage ATP-bi 51.8 13 0.00043 25.3 3.0 24 162-206 62-85 (102)
37 3gce_A Ferredoxin component of 51.6 14 0.00049 25.5 3.6 51 123-195 11-61 (121)
38 3eat_X Pyoverdine biosynthesis 51.5 9.5 0.00033 30.8 2.9 43 158-208 240-283 (293)
39 1vm9_A Toluene-4-monooxygenase 51.4 19 0.00065 24.3 4.1 28 160-196 28-55 (111)
40 4gjz_A Lysine-specific demethy 47.8 28 0.00096 26.3 5.1 38 156-204 197-234 (235)
41 2opw_A Phyhd1 protein; double- 46.8 13 0.00043 29.6 3.0 23 9-31 16-38 (291)
42 3pvj_A Alpha-ketoglutarate-dep 46.8 13 0.00046 29.7 3.1 36 100-141 92-127 (277)
43 1otj_A Alpha-ketoglutarate-dep 44.6 16 0.00053 29.1 3.2 35 102-142 96-130 (283)
44 2qpz_A Naphthalene 1,2-dioxyge 42.0 34 0.0012 22.5 4.2 27 160-196 29-55 (103)
45 1fqt_A Rieske-type ferredoxin 40.9 29 0.001 23.3 3.8 49 124-195 7-56 (112)
46 1oih_A Putative alkylsulfatase 40.3 19 0.00065 28.9 3.1 38 99-142 102-139 (301)
47 1oih_A Putative alkylsulfatase 39.9 23 0.00077 28.5 3.5 41 158-206 243-284 (301)
48 2q4a_A Clavaminate synthase-li 39.9 15 0.00052 29.9 2.5 33 159-200 293-325 (330)
49 3r1j_A Alpha-ketoglutarate-dep 39.7 18 0.0006 29.4 2.8 36 100-141 98-133 (301)
50 2de6_D Ferredoxin component of 38.8 30 0.001 23.5 3.6 50 124-195 6-56 (115)
51 1rie_A Rieske iron-sulfur prot 38.0 27 0.00091 24.5 3.2 21 166-195 62-82 (129)
52 2q4a_A Clavaminate synthase-li 37.0 20 0.00067 29.2 2.7 38 99-142 114-151 (330)
53 3azc_A Cytochrome B6-F complex 43.2 7.2 0.00025 27.9 0.0 57 119-195 13-71 (133)
54 1rfs_A Rieske protein; iron-su 36.0 13 0.00043 26.7 1.2 27 160-195 49-77 (139)
55 1nx8_A CARC, carbapenem syntha 34.0 22 0.00074 28.0 2.4 37 100-142 96-134 (273)
56 3c0d_A Putative nitrite reduct 29.8 43 0.0015 22.8 3.1 52 123-195 6-58 (119)
57 3d8c_A Hypoxia-inducible facto 28.9 52 0.0018 27.2 4.0 43 157-208 258-301 (349)
58 2jo6_A Nitrite reductase [NAD( 28.6 51 0.0017 22.1 3.3 52 123-195 7-60 (113)
59 2wbq_A L-arginine beta-hydroxy 28.3 38 0.0013 27.8 3.1 37 100-143 163-199 (358)
60 2og5_A Putative oxygenase; non 27.9 41 0.0014 27.8 3.2 37 100-142 174-210 (357)
61 2jza_A Nitrite reductase [NAD( 27.8 59 0.002 22.5 3.6 52 123-195 4-57 (130)
62 3o2g_A Gamma-butyrobetaine dio 27.6 36 0.0012 28.5 2.9 35 102-142 200-234 (388)
63 4aay_B AROB; oxidoreductase, r 27.0 69 0.0024 23.7 4.0 22 165-195 92-113 (175)
64 3eat_X Pyoverdine biosynthesis 26.9 31 0.0011 27.7 2.2 36 101-142 108-145 (293)
65 3al5_A HTYW5, JMJC domain-cont 25.4 65 0.0022 26.4 4.0 41 158-209 238-278 (338)
66 3gkq_A Terminal oxygenase comp 25.2 84 0.0029 26.6 4.6 55 120-196 29-83 (389)
67 3gcf_A Terminal oxygenase comp 23.9 83 0.0028 26.7 4.4 54 120-195 32-85 (394)
68 2zyl_A Possible oxidoreductase 22.3 98 0.0033 25.8 4.5 54 121-195 24-77 (386)
69 3gke_A DDMC; rieske cluster, n 21.6 72 0.0025 26.2 3.5 53 121-195 7-59 (349)
70 3pvj_A Alpha-ketoglutarate-dep 20.6 80 0.0027 25.0 3.5 41 158-206 232-273 (277)
71 1nkz_B Light-harvesting protei 20.5 49 0.0017 18.5 1.5 15 16-30 2-16 (41)
No 1
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=100.00 E-value=1e-53 Score=346.04 Aligned_cols=203 Identities=42% Similarity=0.778 Sum_probs=175.6
Q ss_pred CeEeeccccEEEecCCCCHHHHHHHHHHhccCceecEEeecC-CceeeeccceeeeceeeeCCCCChhHHHHHHHHHHHH
Q 028194 1 MQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQ-GETVESTKGTRTSSGTFISASEDKTGILELIEHKIAR 79 (212)
Q Consensus 1 ~e~ls~~P~i~~i~~fLs~~ec~~li~~~~~~~~~s~v~~~~-g~~~~~~~~~R~s~~~~l~~~~~~~~~~~~l~~ri~~ 79 (212)
||+||++|+|++++||||++||++||+++++.++++.+.... |. ...+.+|+|..+|+.... ++++++|++||.+
T Consensus 13 ~e~ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~--~~~~~~R~s~~~~l~~~~--~~~~~~i~~ri~~ 88 (224)
T 2jig_A 13 VVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGK--SVDSEIRTSTGTWFAKGE--DSVISKIEKRVAQ 88 (224)
T ss_dssp EEEEETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTE--EEECSSBCSEEEECCTTC--SHHHHHHHHHHHH
T ss_pred eEEEeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCc--ccccCCEEEeeeEecCCC--CHHHHHHHHHHHH
Confidence 589999999999999999999999999999989999887643 33 245679999999998654 3689999999999
Q ss_pred hhCCCCCCCCcceEEecCCCcccccccccCCCCCCC--CCCCcceEEEEEeeccccCCccccCCCCCCcccCCCCCcccc
Q 028194 80 ATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYG--PQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKC 157 (212)
Q Consensus 80 ~~g~~~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~--~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~ 157 (212)
++++|...+|++||+||++|++|++|+|++...... ..+++|++|+|+||||+++||||+||..... ..++.+.+|
T Consensus 89 ~~gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~--~~~~~~~~c 166 (224)
T 2jig_A 89 VTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQK--VTGDGWSEC 166 (224)
T ss_dssp HHTCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSC--CCSTTSCTT
T ss_pred HhCCCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccc--ccccccccc
Confidence 999999999999999999999999999998643211 2357999999999999999999999986522 223344555
Q ss_pred --cceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccceEEEEEeccccccc
Q 028194 158 --IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209 (212)
Q Consensus 158 --~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G~K~~~~~W~~~~~~ 209 (212)
.+++|+|++|+||||+|++++|+.|++++|+||||++|+||++++|++.++.
T Consensus 167 ~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~~~ 220 (224)
T 2jig_A 167 AKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVAPI 220 (224)
T ss_dssp GGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEESSCC
T ss_pred ccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEEcCCc
Confidence 4799999999999999999999999999999999999999999999998763
No 2
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=100.00 E-value=3.8e-54 Score=345.36 Aligned_cols=183 Identities=35% Similarity=0.697 Sum_probs=161.3
Q ss_pred CeEeeccccEEEecCCCCHHHHHHHHHHhccCceecEEeecCCceeeeccceeeeceeeeCCCCChhHHHHHHHHHHHHh
Q 028194 1 MQVLSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRTSSGTFISASEDKTGILELIEHKIARA 80 (212)
Q Consensus 1 ~e~ls~~P~i~~i~~fLs~~ec~~li~~~~~~~~~s~v~~~~g~~~~~~~~~R~s~~~~l~~~~~~~~~~~~l~~ri~~~ 80 (212)
|+++|++|+|++++||||++||++|++++++.+++|.+.. + ...+++|+|+++|+.. ++++++|++||+++
T Consensus 32 v~~l~~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~--~---~~~~~~RtS~~~wl~~----~~~v~~i~~Ri~~~ 102 (216)
T 3itq_A 32 IISKFEEPLIVVLGNVLSDEECDELIELSKSKLARSKVGS--S---RDVNDIRTSSGAFLDD----NELTAKIEKRISSI 102 (216)
T ss_dssp EEEEETTTTEEEEESCSCHHHHHHHHHHHHHHHC-------------CCCCGGGTTCEECCC----CHHHHHHHHHHHHH
T ss_pred EEEeeCCCCEEEECCcCCHHHHHHHHHHhhcccccceecc--C---CccCCcEeeeeEEeCC----cHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999899988732 1 2457799999999976 36999999999999
Q ss_pred hCCCCCCCCcceEEecCCCcccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCCCCCcccCCCCCcccccce
Q 028194 81 TMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGL 160 (212)
Q Consensus 81 ~g~~~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~ 160 (212)
+|++...+|++||+||++|++|++|+|++..... ...++|++|+++||||+++||||+||. .++
T Consensus 103 ~gl~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~-~~~~~R~~T~l~YLnd~~~GGeT~Fp~---------------~~~ 166 (216)
T 3itq_A 103 MNVPASHGEGLHILNYEVDQQYKAHYDYFAEHSR-SAANNRISTLVMYLNDVEEGGETFFPK---------------LNL 166 (216)
T ss_dssp HTSCGGGBCCCEEEEECBTCCEEEECSSCCTTSG-GGGGCEEEEEEEECSCCSEECCEEETT---------------TTE
T ss_pred cCceeccccceeEEEeCCCCccccccCCCcCCCc-ccCCceEEEEEEecccCCcCceeEecC---------------CCC
Confidence 9999999999999999999999999999864321 124789999999999999999999997 679
Q ss_pred EEeeccCCEEEEeeeCCCCCcCCCCcccccCCccceEEEEEecccccc
Q 028194 161 KVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQE 208 (212)
Q Consensus 161 ~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G~K~~~~~W~~~~~ 208 (212)
+|+|++|+||+|+|++++|++|.+++|+||||++|+||++++|+|.++
T Consensus 167 ~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~~~ 214 (216)
T 3itq_A 167 SVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGT 214 (216)
T ss_dssp EECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEESSC
T ss_pred EEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEecCC
Confidence 999999999999999999999999999999999999999999999875
No 3
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=100.00 E-value=5.5e-37 Score=249.37 Aligned_cols=175 Identities=19% Similarity=0.233 Sum_probs=137.4
Q ss_pred eeccccEEEecCCCCHHHHHHHHHHhcc-CceecEEeecCCceeeeccceeeeceeeeCCCCChhHHHHHHHHHHHHhhC
Q 028194 4 LSWRPRALYFPNFASAEQCQSIIATAKK-RLKPSQLALRQGETVESTKGTRTSSGTFISASEDKTGILELIEHKIARATM 82 (212)
Q Consensus 4 ls~~P~i~~i~~fLs~~ec~~li~~~~~-~~~~s~v~~~~g~~~~~~~~~R~s~~~~l~~~~~~~~~~~~l~~ri~~~~g 82 (212)
|--.+.+++|+||||++||++||++++. .+.++.+.. |. ....+|.+ .++... +++++.|++||.++++
T Consensus 15 ~~~~~~i~~i~dvLs~~Ec~~li~~~e~~~~~dg~~t~--g~---~~~~vr~n--~~l~~d---~~~~~~l~~~i~~~l~ 84 (243)
T 3dkq_A 15 LYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQTS--GA---MATTRKRN--QQLDKD---DPVAVALGQQIMDRLL 84 (243)
T ss_dssp CCCBTTBEEECCSSCHHHHHHHHHHHHTSCCEEECCCS--SB---SSCCCEEE--EECCTT---CHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEECCCCCHHHHHHHHHHHhhCCCccCcccC--CC---ccccceee--eEECCC---CHHHHHHHHHHHHHHc
Confidence 3346789999999999999999999975 666654432 21 23445654 455432 2689999999999877
Q ss_pred CC--------CCCCCcceEEecCCCcccccccccCCCCCCCCCCCcceEEEEEeecc--ccCCccccCCCCCCcccCCCC
Q 028194 83 LP--------QTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSD--VEEGGETMFPFENGIFLDSGY 152 (212)
Q Consensus 83 ~~--------~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd--~~~GGeT~Fp~~~~~~~~~~~ 152 (212)
.. ....|++|++||++|++|++|+|++.....+ ...+|.+|+++|||| +++||||+|+...
T Consensus 85 ~~~~f~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~-~~~~r~~T~~lYLndp~~~~GGetvf~~~~-------- 155 (243)
T 3dkq_A 85 AHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPD-GMIRTDLSATLFLSEPENYQGGELVIQDTY-------- 155 (243)
T ss_dssp TCHHHHHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEETT-EEEECCEEEEEECSCGGGEEECCEEEEETT--------
T ss_pred cCcchhhcccccccccceEEEECCCCeeccCCCCCCCCCCC-ccccceEEEEEEeCCCCCCCCceEEEeeCC--------
Confidence 65 1246779999999999999999998643110 023689999999999 6799999999742
Q ss_pred CcccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccceEEEEEecccccccCC
Q 028194 153 DYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQHE 211 (212)
Q Consensus 153 ~~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G~K~~~~~W~~~~~~~~ 211 (212)
...+|+|++|+||+|++ .++|+||||++|+||++++|+++..+.+
T Consensus 156 -----~~~~V~P~~G~~v~F~s---------~~lH~v~pV~~G~R~~~~~Wi~s~vr~~ 200 (243)
T 3dkq_A 156 -----GQQSIKLSAGSLVLYPS---------SSLHQVTPVLSGERTAAFMWLQSMVRDE 200 (243)
T ss_dssp -----EEEEECCCTTCEEEEET---------TSEEEECCEEEECEEEEEEEEEESCCCH
T ss_pred -----CcEEEecCCCEEEEECC---------CCeEcCccccccCEEEEEEehhhccCCh
Confidence 35789999999999986 6899999999999999999999987763
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.95 E-value=5.1e-27 Score=191.83 Aligned_cols=172 Identities=22% Similarity=0.268 Sum_probs=124.1
Q ss_pred ccEEEecCCCCHHHHHHHHHHhcc-----CceecEEeecCCceeeeccceeeeceeeeCCCCChhH----HHHHHHHHHH
Q 028194 8 PRALYFPNFASAEQCQSIIATAKK-----RLKPSQLALRQGETVESTKGTRTSSGTFISASEDKTG----ILELIEHKIA 78 (212)
Q Consensus 8 P~i~~i~~fLs~~ec~~li~~~~~-----~~~~s~v~~~~g~~~~~~~~~R~s~~~~l~~~~~~~~----~~~~l~~ri~ 78 (212)
+.+++++|||+++||++|++.++. .++++.+... . ....+.+|++...|++......+ +.+++.+.+.
T Consensus 26 ~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~--~-~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~ 102 (247)
T 2hbt_A 26 HGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQ--K-SDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIR 102 (247)
T ss_dssp TSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEEC--C-SSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHHhhhhcCCccccccccc--c-ccccccccccceeeecccccchhHHHHHHHHHHHHHH
Confidence 467999999999999999999874 4677766531 1 12457799999999987542111 2333333332
Q ss_pred HhhC-CCCC---CCCcceEEecCC-CcccccccccCCCCCCCCCCCcceEEEEEeeccc----cCCccccCCCCCCcccC
Q 028194 79 RATM-LPQT---HGEAFNVLRYEI-GQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDV----EEGGETMFPFENGIFLD 149 (212)
Q Consensus 79 ~~~g-~~~~---~~E~~qv~rY~~-G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~----~~GGeT~Fp~~~~~~~~ 149 (212)
.+.+ +... ..+.+|+++|.+ |++|++|.|... ..+|.+|+++|||+. +.||+|.|.....
T Consensus 103 ~ln~~lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~-------~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~---- 171 (247)
T 2hbt_A 103 HCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPN-------GDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK---- 171 (247)
T ss_dssp HTTTTSTTCCEEEECCEEEEEECSSSCCEEEECSSCS-------CCSEEEEEEEECBTTCCHHHHBCCEEECCTTC----
T ss_pred HHhhhcCcccccccceEEEEEecCCCCcccccccCCC-------CCCceEEEEEEeCCCCCCCCCceeEEEecCCC----
Confidence 2222 1111 125689999996 999999999832 457999999999984 5699998654211
Q ss_pred CCCCcccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccceEEEEEecccccc
Q 028194 150 SGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQE 208 (212)
Q Consensus 150 ~~~~~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G~K~~~~~W~~~~~ 208 (212)
.....|.|+.|++|+|.+ +..++|+++|+ .|.||+++.||+...
T Consensus 172 -------~~~~~v~P~~grlv~F~s-------~~~~~H~V~p~-~~~R~sit~W~~~~~ 215 (247)
T 2hbt_A 172 -------AQFADIEPKFDRLLFFWS-------DRRNPHEVQPA-YATRYAITVWYFDAD 215 (247)
T ss_dssp -------SSCEEECCBTTEEEEEEC-------STTCCEEECCB-SSCEEEEEEEEEEHH
T ss_pred -------CceEEEEcCCCEEEEEec-------CCCceeeeccC-CCEEEEEEEEEcCCc
Confidence 034799999999999987 23489999995 589999999998643
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=99.48 E-value=8.9e-13 Score=117.65 Aligned_cols=177 Identities=15% Similarity=0.114 Sum_probs=113.1
Q ss_pred ccc-cEEEecCCCCHHHHHHHHHHhcc--CceecEEeecCCceeeeccceeeeceeeeCC--CCC--hhHHH--------
Q 028194 6 WRP-RALYFPNFASAEQCQSIIATAKK--RLKPSQLALRQGETVESTKGTRTSSGTFISA--SED--KTGIL-------- 70 (212)
Q Consensus 6 ~~P-~i~~i~~fLs~~ec~~li~~~~~--~~~~s~v~~~~g~~~~~~~~~R~s~~~~l~~--~~~--~~~~~-------- 70 (212)
.+| ..++|+|||.++..+.|++.+.. .+..... .-. +-.++.+-.-+.. .++ ..+.+
T Consensus 31 s~PFpH~VIdnfl~d~lle~V~~Efp~~i~f~~Ket----DlY----k~~QsgdLanl~~l~~e~l~~lp~l~~Lr~~L~ 102 (633)
T 3kt7_A 31 SQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKET----DIY----RVNQSGDLANLSGLDWDDLSRLPNLFKLRQILY 102 (633)
T ss_dssp CSSSCCEEESSCBCHHHHHHHHHHHHHHCCCEEEEC----SSE----EEEECCCTTCTTSCCTTCCTTCHHHHHHHHHHT
T ss_pred CCCcceEEECCCCCHHHHHHHHHHhhhccCcccccc----ccc----ceeccccccccccCChhhhccChHHHHHHHHHh
Confidence 445 46899999999999999888753 2322110 000 0011111000000 000 00122
Q ss_pred -HHHHHHHHHhhCC-CCC-CCCcceEEecCCCcccccccccCCCCCCCCCCCcceEEEEEeeccc------cCCccccCC
Q 028194 71 -ELIEHKIARATML-PQT-HGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDV------EEGGETMFP 141 (212)
Q Consensus 71 -~~l~~ri~~~~g~-~~~-~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~------~~GGeT~Fp 141 (212)
..+...+.+++|+ ++. ..-.+++.+|.+|++|.+|.|.+ +.|.+|+++|||++ ..||++.+.
T Consensus 103 S~~Fr~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G~fL~~H~D~~---------~~RrvS~VLYLN~pd~~W~~e~GGeL~Ly 173 (633)
T 3kt7_A 103 SKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVI---------GSRRISFILYLPDPDRKWKSHYGGGLRLF 173 (633)
T ss_dssp SHHHHHHHHHHHTCCCCCSSCCCEEEEEECTTCEEEEECCCC---------TTEEEEEEEECSCTTSCCCGGGBCCEEEC
T ss_pred cHHHHHHHHHHhCCcccCCCceeEEEEEeCCCCeeeecCCCC---------CCeEEEEEEEcCCCCCCCCccCCceEEEe
Confidence 2234456678888 443 23458999999999999999954 34999999999983 369999976
Q ss_pred CCCCcccCCCCCcccccceEEeeccCCEEEEeeeCCCCCcC-CCCcccccCCcc-ceEEEEEecccccccCC
Q 028194 142 FENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTID-RTSLHGSCPVIK-GEKWVATKWIRDQEQHE 211 (212)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~v~P~~G~av~f~n~~~~g~~d-~~~~H~~~pV~~-G~K~~~~~W~~~~~~~~ 211 (212)
.......+. .....+|.|..|++|||.+ . ..++|++.||.. ..|++++.||+.....+
T Consensus 174 d~d~~~~P~-----~d~~~~I~P~fNrLV~F~v-------sp~~S~H~V~eV~~~~~RlSItGWF~~p~~~~ 233 (633)
T 3kt7_A 174 PSILPNVPH-----SDPSAKLVPQFNQIAFFKV-------LPGFSFHDXEEVKVDKHRLSIQGWYHIPQVGE 233 (633)
T ss_dssp CEEETTEEC-----SSCSEEECCCTTEEEEEEC-------CTTTCCEEECCBCSSCCEEEEEEEEECCCTTS
T ss_pred cCCCcCCCC-----CCceEEEecCCCeEEEEEc-------CCCCCcCCCCccCCCCCEEEEEEEeccCCCcc
Confidence 532110000 0135689999999999986 2 279999999984 58999999999876544
No 6
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=98.94 E-value=2.3e-09 Score=85.45 Aligned_cols=95 Identities=17% Similarity=0.040 Sum_probs=70.1
Q ss_pred ceEEecCCCcccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCCCCCccc---CC---CCCcccccceEEee
Q 028194 91 FNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFL---DS---GYDYKKCIGLKVKP 164 (212)
Q Consensus 91 ~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~---~~---~~~~~~~~~~~v~P 164 (212)
.-+.+|.+|+++++|.+. ++.+|.++|||.+..||++.|........ +. +..........|+|
T Consensus 105 ~W~~~~~~G~~~~~H~H~-----------~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P 173 (216)
T 2rg4_A 105 IWINILPEGGVHGSHIHP-----------HSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAP 173 (216)
T ss_dssp EEEEEECTTCCEEEECCT-----------TCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECC
T ss_pred EEEEEcCCCCcccCccCC-----------CCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecC
Confidence 457899999999999882 47899999999988999999976432110 00 00000012248999
Q ss_pred ccCCEEEEeeeCCCCCcCCCCcccccCCcc-ceEEEEEeccc
Q 028194 165 RRGDGLLFYSLFPNGTIDRTSLHGSCPVIK-GEKWVATKWIR 205 (212)
Q Consensus 165 ~~G~av~f~n~~~~g~~d~~~~H~~~pV~~-G~K~~~~~W~~ 205 (212)
+.|++|+|++ ...|++.|... +.|+++..-+.
T Consensus 174 ~~G~lvlFpS---------~l~H~V~p~~~~~~RiSIsFN~~ 206 (216)
T 2rg4_A 174 KVGDVLLWES---------WLRHEVPMNMAEEDRISVSFNYA 206 (216)
T ss_dssp CTTEEEEEET---------TSCEEECCCCSSSCEEEEEEEEE
T ss_pred CCCeEEEECC---------CCEEeccCCCCCCCEEEEEEEee
Confidence 9999999997 79999999886 58888765543
No 7
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=98.06 E-value=5.5e-06 Score=68.08 Aligned_cols=182 Identities=15% Similarity=0.078 Sum_probs=96.5
Q ss_pred cEEEecCCCCHHHHHHHHHHhccCceecEEeecCCceeeeccceee-ec--eeeeCCCCChhHH--HHHHHHHHHHhhCC
Q 028194 9 RALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGETVESTKGTRT-SS--GTFISASEDKTGI--LELIEHKIARATML 83 (212)
Q Consensus 9 ~i~~i~~fLs~~ec~~li~~~~~~~~~s~v~~~~g~~~~~~~~~R~-s~--~~~l~~~~~~~~~--~~~l~~ri~~~~g~ 83 (212)
..+++++||++++|++|.+.+...+........ +... .....+. .. ..++.....-..+ -.+|...+++++|-
T Consensus 32 Gyvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~p-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~l~~~~~~llG~ 109 (288)
T 2rdq_A 32 GYLFLRNVLDRDLVKTVAEQMREGLVALGAADP-HATL-EELTIDSFESVDEVAMHDYVKYDAFWNNPSTIKVFEQVFGE 109 (288)
T ss_dssp SEEEECSCSCHHHHHHHHHHHHHHHHHHSCCCT-TCCT-TTCCCSCSTTSCHHHHHHHCCHHHHHTSHHHHHHHHHHHSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHHHhcCCCCC-CCCc-chhhhhhhcccccccccchHHHHHHHcCHHHHHHHHHHhCC
Confidence 468999999999999999988753321111000 0000 0000000 00 0000000000001 12344445566664
Q ss_pred CCCCCCcceEEecCC----------CcccccccccCCCCCCCCCCCcceEEEEEeecccc-CCccccC-CCCCCccc-CC
Q 028194 84 PQTHGEAFNVLRYEI----------GQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVE-EGGETMF-PFENGIFL-DS 150 (212)
Q Consensus 84 ~~~~~E~~qv~rY~~----------G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~-~GGeT~F-p~~~~~~~-~~ 150 (212)
+.-.. ...+.+..+ |....||.|..... ...+.+|+.|+|.|+. +.|.|.| |....... ..
T Consensus 110 ~~~l~-~~~~~~~~p~~~~~k~p~~g~~~~wHqD~~~~~-----~~~~~v~~wiaL~d~~~enG~l~vvPGSH~~~~~~~ 183 (288)
T 2rdq_A 110 PVFVF-LSTTIRYYPSQAGSEEPSFHYLTPFHQDGFYIG-----PNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDH 183 (288)
T ss_dssp CEEEE-EEEEEEEECCCTTCSSCCCTTSCCSBCHHHHSC-----SCCCCEEEEEESSCCCTTTCEEEEETTTTSSCCCCC
T ss_pred Cceee-eeeeeeecCCcccccccCcCCCcCccccccccC-----CCCCeEEEEEECCCCCccCCcEEEEeCCcccccccc
Confidence 42111 122333223 44678999985421 2346899999999985 5677766 43321111 00
Q ss_pred --------------CC---C-cccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc----eEEEEEeccccc
Q 028194 151 --------------GY---D-YKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG----EKWVATKWIRDQ 207 (212)
Q Consensus 151 --------------~~---~-~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G----~K~~~~~W~~~~ 207 (212)
+. + ..+...+.+.-++|++|||. ..++|++.|..+. .||++..|+...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGdv~lf~---------~~~~H~s~~N~s~~~R~~R~s~~~~~~~~ 253 (288)
T 2rdq_A 184 VLNESFRRFGHPVRGIPPTEVSEDEHLLHSPMEPGDILLFH---------AHMCHKSIPNLSKDPRLMRMSMDTRVQPA 253 (288)
T ss_dssp EEEEEEEETTEEEEECCGGGSCTTSCEECCCCCTTCEEEEE---------TTCCEEEECCCCCTTCCCEEEEEEEEEET
T ss_pred ccchhhhccCcccccCCCccccccCceeecccCCCCEEEEe---------CCceecCCCCCCCCccceEEEEEEEEecC
Confidence 00 0 01112356677899999996 4999999999875 378998887654
No 8
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=97.97 E-value=5.3e-05 Score=62.97 Aligned_cols=182 Identities=14% Similarity=0.115 Sum_probs=94.6
Q ss_pred ccEEEecCCCCHHHHHHHHHHhccCceec--EEeecCCceeeeccceeeeceeeeCCCCChhHHH-----HHHHHHHHHh
Q 028194 8 PRALYFPNFASAEQCQSIIATAKKRLKPS--QLALRQGETVESTKGTRTSSGTFISASEDKTGIL-----ELIEHKIARA 80 (212)
Q Consensus 8 P~i~~i~~fLs~~ec~~li~~~~~~~~~s--~v~~~~g~~~~~~~~~R~s~~~~l~~~~~~~~~~-----~~l~~ri~~~ 80 (212)
...+++++||+++||++|.+.+...+... .+.. .+... .....|.....+.. . ..+. ..|...++++
T Consensus 21 dGyvvl~~~l~~e~v~~l~~~~~~~l~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~---~-~~~~~~~~~p~l~~~~~~l 94 (313)
T 2fct_A 21 NGFIGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQ-DLDAI-SGGTNIANYDRHLD---D-DFLASHICRPEICDRVESI 94 (313)
T ss_dssp HSEEEEEESSCHHHHHHHHHHHHHHHTCCTTCSCC-CCCC-----CGGGGBCGGGT---C-HHHHHHTTCHHHHHHHHHH
T ss_pred CCEEECCCCCCHHHHHHHHHHHHHHHhcccccccc-ccccc-CCccchhccccccc---c-HHHHHHHcChHHHHHHHHH
Confidence 35689999999999999987765422111 1110 00000 00001111101110 1 0111 3355556677
Q ss_pred hCCCCCCCCcceEEecCCCcccccccccCCCCCCC------CCCCc--ceEEEEEeecccc-CCccccC-CCCCCccc--
Q 028194 81 TMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYG------PQMSQ--RLASFLLYLSDVE-EGGETMF-PFENGIFL-- 148 (212)
Q Consensus 81 ~g~~~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~------~~~~~--R~~T~liYLnd~~-~GGeT~F-p~~~~~~~-- 148 (212)
+|-+.......-+.+...++...||.|...-...+ +.... +.+|+.|+|.|+. +.|.|.| |.......
T Consensus 95 lG~~~~~~~~~~~~k~Pg~~~~~wHqD~~~~~~~g~p~~~~p~~~~~~~~l~~wiaL~D~~~enG~l~~vPGSH~~~~~~ 174 (313)
T 2fct_A 95 LGPNVLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQIIWPENEEFGGTITVWTAFTDANIANGCLQFIPGTQNSMNYD 174 (313)
T ss_dssp HCSCEEEEEEEEEEECTTCCEECCBCCSSSCTTTSSCSEECCTTSCCCSCEEEEEESSCBCTTBTCEEEETTCTTSCCBC
T ss_pred cCCCeEeeeeeEEEeCCCCCCCCccccccccccCCCccccccccccccCeEEEEEEeccCCccCCCEEEEcCCCcCCccc
Confidence 77332111112233433334478999985421110 00011 6899999999984 5677765 43321100
Q ss_pred -------C---------CC-------CC---------c--ccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCc-
Q 028194 149 -------D---------SG-------YD---------Y--KKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVI- 193 (212)
Q Consensus 149 -------~---------~~-------~~---------~--~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~- 193 (212)
. .+ .+ + .....+.+.-++|++|||. ..++|++.|..
T Consensus 175 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~---------~~l~H~s~~N~~ 245 (313)
T 2fct_A 175 ETKRMTYEPDANNSVVKDGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFW---------STLMHASYPHSG 245 (313)
T ss_dssp TTSCCCCCTTTCSSCEETTEEEEBTTBCGGGGBSSTTCCCCGGGCEEECBCTTEEEEEE---------TTSEEEECCBCS
T ss_pred cccccccChhhhhhhhhccccccccccchhhhccccccCCccCceeEeeeCCceEEEEe---------CCceeeCCCCCC
Confidence 0 00 00 0 1124578889999999996 49999999998
Q ss_pred -cc-eEEEEEecc
Q 028194 194 -KG-EKWVATKWI 204 (212)
Q Consensus 194 -~G-~K~~~~~W~ 204 (212)
+. .|+++..-+
T Consensus 246 ss~~~R~a~~~~y 258 (313)
T 2fct_A 246 ESQEMRMGFASRY 258 (313)
T ss_dssp SSSSCEEEEEEEE
T ss_pred CCCCceEEEEEEE
Confidence 43 677765433
No 9
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=97.93 E-value=0.00016 Score=59.93 Aligned_cols=180 Identities=16% Similarity=0.116 Sum_probs=93.3
Q ss_pred cEEEecCCCCHHHHHHHHHHhccCceec-----EEeecC---Cceeeeccceee--eceeeeCCCCChhHHH------HH
Q 028194 9 RALYFPNFASAEQCQSIIATAKKRLKPS-----QLALRQ---GETVESTKGTRT--SSGTFISASEDKTGIL------EL 72 (212)
Q Consensus 9 ~i~~i~~fLs~~ec~~li~~~~~~~~~s-----~v~~~~---g~~~~~~~~~R~--s~~~~l~~~~~~~~~~------~~ 72 (212)
..+++++||+++||++|.+.++..+... .....+ +....... .+. ....|. .+ +.+ .+
T Consensus 35 Gyvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~--~~~~~l~~~p~ 108 (308)
T 2a1x_A 35 GFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPS-EKMITKVQDFQ---ED--KELFRYCTLPE 108 (308)
T ss_dssp SEEEETTCSCHHHHHHHHHHHHHHHTTSCCCSSCEEECCEEECCCE------EECCEEECCT---TS--HHHHHHHHCHH
T ss_pred CEEEccCCCCHHHHHHHHHHHHHHHhccccCCCccccccccccccccCch-HHHHhhhhhhh---hC--HHHHHHHhCHH
Confidence 4689999999999999999876522110 000000 00000000 010 001121 11 222 23
Q ss_pred HHHHHHHhhCCCCCCCCcceEEecCC-Ccc---cccccccCCCCCCCCCCCcceEEEEEeecccc-CCccccC-CCCCCc
Q 028194 73 IEHKIARATMLPQTHGEAFNVLRYEI-GQK---YDSHYDAFNPAEYGPQMSQRLASFLLYLSDVE-EGGETMF-PFENGI 146 (212)
Q Consensus 73 l~~ri~~~~g~~~~~~E~~qv~rY~~-G~~---y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~-~GGeT~F-p~~~~~ 146 (212)
|...+++++|-+.......-+.+... |+. ..||.|...-.. ....+.+|+.|+|.|+. +.|.|.| |.....
T Consensus 109 l~~~~~~llG~~~~~~~~~~~~k~P~~g~~~~~~~wHqD~~~~~~---~p~~~~v~~wiaL~D~~~enG~l~~vPGSH~~ 185 (308)
T 2a1x_A 109 ILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPF---RPSDLIVCAWTAMEHISRNNGCLVVLPGTHKG 185 (308)
T ss_dssp HHHHHHHHHCSSEEEEEEEEEEECCC--------CCBCGGGGCCE---ECGGGEEEEEEESSCBCTTBTCEEECTTGGGS
T ss_pred HHHHHHHhcCCCcceecceEEEcCCCCCCCccCCCCccCCccccC---CCCCCeEEEEEEeeccCCCCCcEEEEcCCCCC
Confidence 44556667774322111122333332 322 479999753210 11247899999999984 5677766 432211
Q ss_pred cc-C-------CC--------CCcc-cccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCcc-ceEEEEEecccc
Q 028194 147 FL-D-------SG--------YDYK-KCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK-GEKWVATKWIRD 206 (212)
Q Consensus 147 ~~-~-------~~--------~~~~-~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~-G~K~~~~~W~~~ 206 (212)
.. . .+ .++. +...+.+.-++|++|||. ..++|++.|..+ ..|+++...+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGd~vlf~---------~~~~H~s~~N~s~~~R~~~~~~y~~ 254 (308)
T 2a1x_A 186 SLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFH---------PLLIHGSGQNKTQGFRKAISCHFAS 254 (308)
T ss_dssp CCCCCCC-----------CCCCC-CCCSCCEEECBCTTCEEEEC---------TTCCEEECCBCSSSCEEEEEEEEEE
T ss_pred ccccccccccccCccccccCCccccccCCeEEccCCCccEEEEC---------CCccccCCCCCCCCceEEEEEEEEC
Confidence 10 0 00 0011 124577888999999995 599999999876 478887765543
No 10
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=97.57 E-value=0.0013 Score=52.79 Aligned_cols=169 Identities=15% Similarity=0.125 Sum_probs=94.0
Q ss_pred cEEEecCCCCHHHHHHHHHHhcc--CceecEEeecCCceeeeccceeeeceeeeCC------------CCChhHHHHHHH
Q 028194 9 RALYFPNFASAEQCQSIIATAKK--RLKPSQLALRQGETVESTKGTRTSSGTFISA------------SEDKTGILELIE 74 (212)
Q Consensus 9 ~i~~i~~fLs~~ec~~li~~~~~--~~~~s~v~~~~g~~~~~~~~~R~s~~~~l~~------------~~~~~~~~~~l~ 74 (212)
.+.++++||+++|.++|++.... .+....... -|... .. -|. .+|+.. .....+.+..|.
T Consensus 41 gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~-~g~~~--~~-~R~--~~~~g~~~Y~Ys~~~~~~~p~wp~~l~~l~ 114 (238)
T 2iuw_A 41 RVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIR-EDITY--QQ-PRL--TAWYGELPYTYSRITMEPNPHWHPVLRTLK 114 (238)
T ss_dssp EEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEES-SSCEE--EC-SSE--EEEEECCCTTSCHHHHCCBSSCCHHHHHHH
T ss_pred cEEEECCCCCHHHHHHHHHHHHHhCCCccCceec-CCccc--cc-CCe--eEEcCCCccccCCcccCCCCCCCHHHHHHH
Confidence 49999999999999999988742 344332211 12211 11 111 123321 001124677788
Q ss_pred HHHHHhhCCCCCCCCcceEEecCCCc-ccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCCCCCcccCCCCC
Q 028194 75 HKIARATMLPQTHGEAFNVLRYEIGQ-KYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYD 153 (212)
Q Consensus 75 ~ri~~~~g~~~~~~E~~qv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~ 153 (212)
++++++++.+ .+..-|..|.+|+ .-.+|.|....- ..+..++|+-+ |+...|-...........+
T Consensus 115 ~~~~~~~g~~---~n~~LvN~Y~~G~d~i~~H~D~~~~~----~~~~~IaslSL-------G~~~~f~f~~~~~~~~~~~ 180 (238)
T 2iuw_A 115 NRIEENTGHT---FNSLLCNLYRNEKDSVDWHSDDEPSL----GRCPIIASLSF-------GATRTFEMRKKPPPEENGD 180 (238)
T ss_dssp HHHHHHHSCC---CCEEEEEEECSTTCCEEEECCCCGGG----CSSCCEEEEEE-------ESCEEEEEEECCC------
T ss_pred HHHHHHhCCC---CCEEEEEEECCCCCceeCCcCChhhc----CCCCcEEEEEC-------CCCEEEEEeccCCccccCc
Confidence 8888887754 3356789999997 999999974311 11245655553 3333332110000000000
Q ss_pred cccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCc--cceEEEEEe
Q 028194 154 YKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVI--KGEKWVATK 202 (212)
Q Consensus 154 ~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~--~G~K~~~~~ 202 (212)
......++|.-..|++|++.- .......|++.+.. .+.|+.+|.
T Consensus 181 ~~~~~~~~i~L~~gsllvM~G-----~~r~~w~H~I~~~~~~~~~RIsLTf 226 (238)
T 2iuw_A 181 YTYVERVKIPLDHGTLLIMEG-----ATQADWQHRVPKEYHSREPRVNLTF 226 (238)
T ss_dssp --CCCEEEEEECTTCEEEEEE-----THHHHEEEEECCCSSCCCCEEEEEE
T ss_pred ccCCceEEEEcCCCCEEEECh-----hhhCccEecCCCcCCCCCCEEEEEe
Confidence 000135789999999999963 22234469988763 567877763
No 11
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=97.53 E-value=0.0001 Score=61.52 Aligned_cols=174 Identities=17% Similarity=0.107 Sum_probs=92.6
Q ss_pred cEEEecCCCCHHHHHHHHHHhccCceec-------EEeecCCceeeeccceeeeceeeeCCCCChhHHH------HHHHH
Q 028194 9 RALYFPNFASAEQCQSIIATAKKRLKPS-------QLALRQGETVESTKGTRTSSGTFISASEDKTGIL------ELIEH 75 (212)
Q Consensus 9 ~i~~i~~fLs~~ec~~li~~~~~~~~~s-------~v~~~~g~~~~~~~~~R~s~~~~l~~~~~~~~~~------~~l~~ 75 (212)
..+++++||+++||++|.+.++..+... .+....| ...|.-...+.. ++++ .+|..
T Consensus 47 Gyvvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~------~~~r~~~~~~~~-----~~~f~~l~~~p~l~~ 115 (310)
T 3emr_A 47 GFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPES------NDIRSIFHVHQD-----DNYFQDVANDKRILD 115 (310)
T ss_dssp SEEEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEECTTT------CCEEEEECHHHH-----CHHHHHHHTCHHHHH
T ss_pred CEEEccCCCCHHHHHHHHHHHHHHHhcccccCCccceecCCC------cceeEEeehhhc-----cHHHHHHHhChHHHH
Confidence 4689999999999999999886522211 1111111 112321111111 1222 23444
Q ss_pred HHHHhhCCCCCCCCcceEEecC---CCcccccccccCCCC-CCCCCCCcceEEEEEeecccc-CCccccC-CCCCCcccC
Q 028194 76 KIARATMLPQTHGEAFNVLRYE---IGQKYDSHYDAFNPA-EYGPQMSQRLASFLLYLSDVE-EGGETMF-PFENGIFLD 149 (212)
Q Consensus 76 ri~~~~g~~~~~~E~~qv~rY~---~G~~y~~H~D~~~~~-~~~~~~~~R~~T~liYLnd~~-~GGeT~F-p~~~~~~~~ 149 (212)
.+++++|-+....-. .+.+. .|....||.|...-. ..+ ....+.+|+.|+|.|+. +.|.|.| |........
T Consensus 116 i~~~llG~~~~l~~s--~~~~k~p~~g~~~~wHqD~~~~~~~~g-~P~~~~v~~wiaL~D~t~enG~l~viPGSH~~~~~ 192 (310)
T 3emr_A 116 IVRHLLGSDVYVHQS--RINYKPGFKGKEFDWHSDFETWHVEDG-MPRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVS 192 (310)
T ss_dssp HHHHHHTSCEEEEEE--EEECCCTTCCCCEEEECHHHHHHHHHC-CCSSCEEEEEEESSCBCSSSCCCEECTTGGGEEEE
T ss_pred HHHHHcCCceEEEee--EEEEcCCCCCCCCCcCCCCccccccCC-CcccceEEEEEEecCCCCcCCCEEEEeCCCCCccc
Confidence 455666643211111 12233 256788999964210 000 01257899999999984 5677766 332211100
Q ss_pred C-C---------------CCcc----------ccc-ceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc-eEEEEE
Q 028194 150 S-G---------------YDYK----------KCI-GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG-EKWVAT 201 (212)
Q Consensus 150 ~-~---------------~~~~----------~~~-~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G-~K~~~~ 201 (212)
. + .... ... .+.+.-++|++|||. ..++|++.|-.+. .|+++.
T Consensus 193 ~~g~~p~~~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~aGdvl~f~---------~~~~H~s~~N~S~~~R~~l~ 263 (310)
T 3emr_A 193 CVGETPDNNYKESLKKQKLGVPDEESLRELTRIGGGISVPTGKAGSVTLFE---------SNTMHGSTSNITPYPRNNLF 263 (310)
T ss_dssp CCC-----------------CCCHHHHHHHHHHHTSCBCCCBSTTCEEEEE---------TTCCEEECCCCSSCCCCEEE
T ss_pred ccccccccccccccccccccCCCHHHHHHHHhccCceEEeeeCCceEEEEe---------CCceecCCCCCCCCCeEEEE
Confidence 0 0 0000 011 456677899999996 4999999998764 566665
Q ss_pred eccc
Q 028194 202 KWIR 205 (212)
Q Consensus 202 ~W~~ 205 (212)
.-+.
T Consensus 264 ~~y~ 267 (310)
T 3emr_A 264 MVYN 267 (310)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4443
No 12
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=97.44 E-value=0.00031 Score=58.77 Aligned_cols=175 Identities=14% Similarity=0.123 Sum_probs=89.9
Q ss_pred cEEEecCCCCHHHHHHHHHHhccCcee--cEEeecCCceeeeccceeeeceeeeCCCCChhHHH------HHHHHHHHHh
Q 028194 9 RALYFPNFASAEQCQSIIATAKKRLKP--SQLALRQGETVESTKGTRTSSGTFISASEDKTGIL------ELIEHKIARA 80 (212)
Q Consensus 9 ~i~~i~~fLs~~ec~~li~~~~~~~~~--s~v~~~~g~~~~~~~~~R~s~~~~l~~~~~~~~~~------~~l~~ri~~~ 80 (212)
..++++++|+++|+++|.+.+...+.. ..+.. +.. ....|.....+.. ++.+ .+|...++++
T Consensus 24 Gyv~i~~~l~~~~v~~l~~~i~~~l~~~~~~~~~--~~~---g~~~~~~~~~~~~-----~~~f~~l~~~p~l~~~~~~l 93 (319)
T 3gja_A 24 GYIGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYP--DSN---GKANISNYDRHLD-----IDLLAEHIMRPEIVDRVGSL 93 (319)
T ss_dssp SEEEEEESSCHHHHHHHHHHHHHHHHCCTTCSSC--SCS---SHHHHTTTTGGGT-----CHHHHHHHHCHHHHHHHHHH
T ss_pred CEEECcCCCCHHHHHHHHHHHHHHhhcCcccccc--CCC---ccchhhhhhhccc-----CHHHHHHHcChHHHHHHHHH
Confidence 457899999999999998887653321 11110 000 0011211111111 1222 2344455666
Q ss_pred hCCCCCCCCcceEEecCCCcccccccccCCCCCCC------CCCC-----cceEEEEEeecccc-CCccccC-CCCCCcc
Q 028194 81 TMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYG------PQMS-----QRLASFLLYLSDVE-EGGETMF-PFENGIF 147 (212)
Q Consensus 81 ~g~~~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~------~~~~-----~R~~T~liYLnd~~-~GGeT~F-p~~~~~~ 147 (212)
+|-+.-..-..-+.+...++...||.|.......+ +... .+.+|+.|+|.|+. +-|.|.| |......
T Consensus 94 lG~~~~~~~s~~~~k~Pg~~~~~wHqD~~y~~~~g~p~~~~P~~~~~p~~~~~v~~wiaL~d~t~enG~l~vvPGSH~~~ 173 (319)
T 3gja_A 94 IGRNLLCWRSEFFPKYQGDEGTDWHQAATFAHATGKPQIIWPSDEGRPAFIGTITVWTAFTHSTEQNGCLQLMPGTHTSM 173 (319)
T ss_dssp HCSSEEEEEEEEEEECTTCCCEEEEEECCBCTTTCCBSEECCCCSSSCEECCCEEEEEESSCBCTTTTCEEECSCC---C
T ss_pred cCCceEEeeeeEeecCCCCCCCCcccCCcccccCCCccccCccccccccccceEEEEEEeccCCCcCcCEEEEeCCccCc
Confidence 77432111111233443333478999975321110 1111 13599999999984 4566665 3322111
Q ss_pred c-C-----------------CC-------CC-----------cccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccC
Q 028194 148 L-D-----------------SG-------YD-----------YKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCP 191 (212)
Q Consensus 148 ~-~-----------------~~-------~~-----------~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~p 191 (212)
. + .+ .+ ...+..+.+.-++|++|||.. .++|++.|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~d~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~~---------~~~H~s~~ 244 (319)
T 3gja_A 174 NYDESKGMDYDADAINQREKDGIKRGFFGYDYRSLQKDPDWKPDESQAYPMVLKPGEAVIFWS---------NTMHASLP 244 (319)
T ss_dssp EECCC------------------------------------------CCBCCBCTTEEEEEET---------TSCEEECC
T ss_pred ccCcccccccCchhhhhhccccccccccccchhhhccccccccccCceeEeeECCCeEEEEcC---------CccccCCC
Confidence 0 0 00 00 001234667778999999964 99999999
Q ss_pred Cc--cc-eEEEEEe
Q 028194 192 VI--KG-EKWVATK 202 (212)
Q Consensus 192 V~--~G-~K~~~~~ 202 (212)
-. +. .|+++..
T Consensus 245 N~~ts~~~R~a~~~ 258 (319)
T 3gja_A 245 HTGSKTDYRMGFAA 258 (319)
T ss_dssp CCSCTTCCEEEEEE
T ss_pred CCCCCCCcEEEEEE
Confidence 98 54 6776654
No 13
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=97.29 E-value=0.0071 Score=47.28 Aligned_cols=178 Identities=13% Similarity=0.068 Sum_probs=97.3
Q ss_pred eEeeccccEEEecCCCCHHHHHHHHHHhcc--Cc---eecEEeecCCceeee----------ccceeeeceeeeCCCCCh
Q 028194 2 QVLSWRPRALYFPNFASAEQCQSIIATAKK--RL---KPSQLALRQGETVES----------TKGTRTSSGTFISASEDK 66 (212)
Q Consensus 2 e~ls~~P~i~~i~~fLs~~ec~~li~~~~~--~~---~~s~v~~~~g~~~~~----------~~~~R~s~~~~l~~~~~~ 66 (212)
|-|-..-..+++++||+++|+++|.+.... .+ +...+.. -|+.... ...++-|........ .
T Consensus 4 ~~~~~~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~-~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~~~p--w 80 (204)
T 3s57_A 4 RHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQV-FGKWHSVPRKQATYGDAGLTYTFSGLTLSPKP--W 80 (204)
T ss_dssp EEEEETTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEE-TTEEEECSSEEEEEECTTCCEEETTEEECCEE--C
T ss_pred ceeeeCCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEE-CCeEeccCcEEEEECCCCCCcccCCCcccCCC--C
Confidence 345555667899999999999999887643 44 2222221 1221100 011222221111111 1
Q ss_pred hHHHHHHHHHHHHhhCCCCCCCCcceEEecCCCc-ccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCCCCC
Q 028194 67 TGILELIEHKIARATMLPQTHGEAFNVLRYEIGQ-KYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENG 145 (212)
Q Consensus 67 ~~~~~~l~~ri~~~~g~~~~~~E~~qv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~ 145 (212)
.+.+..|.++++++++.+. ...-+..|.+|+ .-.+|.|....- ..+.-++|+-+ |+...|-....
T Consensus 81 p~~L~~l~~~~~~~~g~~~---n~~LvN~Y~~G~d~i~~H~D~~~~~----~~~~~IasvSL-------G~~~~f~~~~~ 146 (204)
T 3s57_A 81 IPVLERIRDHVSGVTGQTF---NFVLINRYKDGSDHICEHRDDEREL----APGSPIASVSF-------GASRDFVFRHK 146 (204)
T ss_dssp CHHHHHHHHHHHHHHCCCC---SEEEEEEESSTTCCEEEECCCCTTB----CTTCCEEEEEE-------ESCEEEEEEEG
T ss_pred CHHHHHHHHHHHHHhCCCC---ceeEEEEECCCCCcccceecChhhc----cCCCcEEEEEC-------CCceEEEEEEc
Confidence 2578888999988887543 346788999999 899999975321 12334444442 22222211100
Q ss_pred cccCCCCCcccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCcc--ceEEEEEe
Q 028194 146 IFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK--GEKWVATK 202 (212)
Q Consensus 146 ~~~~~~~~~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~--G~K~~~~~ 202 (212)
.....+ .......++|.-..|+++++. |.......|++.+... |.|+.+|.
T Consensus 147 ~~~~~~-~~~~~~~~~~~L~~GsllvM~-----g~~q~~w~H~Ip~~~~~~~~RislTF 199 (204)
T 3s57_A 147 DSRGKS-PSRRVAVVRLPLAHGSLLMMN-----HPTNTHWYHSLPVRKKVLAPRVNLTF 199 (204)
T ss_dssp GGCSSS-CSCCCCCEEEEECTTEEEEEE-----TTHHHHEEEEECCCTTCCSCEEEEEE
T ss_pred CCCccc-cccCCceEEEECCCCCEEEEC-----chhhheeEeeccccCCCCCCEEEEEe
Confidence 000000 000013578999999999995 2223335688766652 67887764
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=97.02 E-value=0.019 Score=45.12 Aligned_cols=108 Identities=21% Similarity=0.224 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHhhCCCCCCCCcceEEecCCCcccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCCCCCccc
Q 028194 69 ILELIEHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFL 148 (212)
Q Consensus 69 ~~~~l~~ri~~~~g~~~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~ 148 (212)
.+..|.+++....|++....+..-+..|.+|+.-.+|.|..... .+..++|+-+ |+...|-......
T Consensus 85 ~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~~G~~i~~H~D~~e~~-----~~~pI~svSL-------G~~~~f~f~~~~~- 151 (211)
T 3i3q_A 85 SFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPD-----LRAPIVSVSL-------GLPAIFQFGGLKR- 151 (211)
T ss_dssp HHHHHHHHHHHHTTCTTCCCCEEEEEEECTTCCEEEECCCCCSC-----TTSCEEEEEE-------ESCEEEEECCSST-
T ss_pred HHHHHHHHHHHhcCCCCcCCCEEEEEEEcCCCCcccccCCCccc-----cCCCEEEEEC-------CCCeEEEEecccC-
Confidence 56778888888777643333557888999999999999963211 1234666553 3444443211000
Q ss_pred CCCCCcccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCcc-------ceEEEEEe
Q 028194 149 DSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK-------GEKWVATK 202 (212)
Q Consensus 149 ~~~~~~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~-------G~K~~~~~ 202 (212)
.....+|.-..|+++++. |.... ..|++.++.. +.|+.+|.
T Consensus 152 -------~~~~~~i~L~~GsllvM~-----G~~r~-~~H~I~~~~~~~~p~~~~~RIsLTF 199 (211)
T 3i3q_A 152 -------NDPLKRLLLEHGDVVVWG-----GESRL-FYHGIQPLKAGFHPLTIDCRYNLTF 199 (211)
T ss_dssp -------TSCCEEEEECTTCEEEEC-----GGGTT-CCEEECCCCCCCBTTTBTCEEEEEE
T ss_pred -------CCceEEEECCCCCEEEEC-----chHHc-eEeccCcccCCcCCCCCCCEEEEEe
Confidence 013578999999999994 33222 5799998886 34777764
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=96.93 E-value=0.0055 Score=51.77 Aligned_cols=143 Identities=15% Similarity=0.167 Sum_probs=71.6
Q ss_pred eeccccEEEecCCCCHHHHHHHHHHhccCceecEEeec---CCce-eeeccceeeece------eeeCCCCChhHHHHHH
Q 028194 4 LSWRPRALYFPNFASAEQCQSIIATAKKRLKPSQLALR---QGET-VESTKGTRTSSG------TFISASEDKTGILELI 73 (212)
Q Consensus 4 ls~~P~i~~i~~fLs~~ec~~li~~~~~~~~~s~v~~~---~g~~-~~~~~~~R~s~~------~~l~~~~~~~~~~~~l 73 (212)
.+.-|.+.++++|||++|.+.|++...-.-....+... .+.. ...-..++-+.. .|-. . -+ +.+..|
T Consensus 107 ~~lp~Gl~~~p~fis~~Ee~~Ll~~i~w~~~~~~~~~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~-~-~P-~~L~~l 183 (345)
T 3tht_A 107 QALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSG-G-LP-DICESF 183 (345)
T ss_dssp CSCCTTEEEETTCSCHHHHHHHHTTCC----------------CEEECCC-------------------C-CC-HHHHHH
T ss_pred ccCCCceEEEcCcCCHHHHHHHHHhcccCCccccccCcccccCceEEEECCcccccccccccCCCCCc-C-cC-HHHHHH
Confidence 45567899999999999999998766421111111100 0000 000011111110 1100 0 11 346677
Q ss_pred HHHHHHhhCCCCCCCCcceEEecCCCcccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCCCCCcccCCCCC
Q 028194 74 EHKIARATMLPQTHGEAFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYD 153 (212)
Q Consensus 74 ~~ri~~~~g~~~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~ 153 (212)
.+|+.+. ++........-+..|.+|+.-.+|.|.... .+..++|+-+ |+...|-.....
T Consensus 184 ~~r~~~~-~~~~~~~n~~lvN~Y~~G~~I~~H~D~~~~------~~~~I~slSL-------G~~~~f~f~~~~------- 242 (345)
T 3tht_A 184 LEKWLRK-GYIKHKPDQMTINQYEPGQGIPAHIDTHSA------FEDEIVSLSL-------GSEIVMDFKHPD------- 242 (345)
T ss_dssp HHHHHHH-TSCSSCCSEEEEEEECTTCCEEEECCCTTT------BCSCEEEEEE-------SSCEEEEEECTT-------
T ss_pred HHHHHhc-ccCCCCCCEEEEEEecCCCCEeeccCCchh------cCCeEEEEEC-------CCceeEEEccCC-------
Confidence 7777642 332223345778899999999999998542 2244555442 333333221100
Q ss_pred cccccceEEeeccCCEEEEe
Q 028194 154 YKKCIGLKVKPRRGDGLLFY 173 (212)
Q Consensus 154 ~~~~~~~~v~P~~G~av~f~ 173 (212)
...++|.-..|+++++.
T Consensus 243 ---~~~~~l~L~~gsLlvM~ 259 (345)
T 3tht_A 243 ---GIAVPVMLPRRSLLVMT 259 (345)
T ss_dssp ---SCEEEEEECTTEEEEEC
T ss_pred ---CceEEEEcCCCcEEEEC
Confidence 02467888888888884
No 16
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=96.78 E-value=0.0036 Score=51.11 Aligned_cols=93 Identities=17% Similarity=0.132 Sum_probs=59.5
Q ss_pred CcccccccccCCCCCCCCCCCc-ceEEEEEeecccc-CCccccC-CCCCCcccC-----C-----CC--------Ccccc
Q 028194 99 GQKYDSHYDAFNPAEYGPQMSQ-RLASFLLYLSDVE-EGGETMF-PFENGIFLD-----S-----GY--------DYKKC 157 (212)
Q Consensus 99 G~~y~~H~D~~~~~~~~~~~~~-R~~T~liYLnd~~-~GGeT~F-p~~~~~~~~-----~-----~~--------~~~~~ 157 (212)
|+...||.|...-. .... +.+|+.|+|.|+. ++|.|.| |........ . +. .+...
T Consensus 150 ~~~~~wHqD~~~~~----~~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (291)
T 2opw_A 150 GGEVSPHQDASFLY----TEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNS 225 (291)
T ss_dssp BCCEEEECGGGTSC----EESSSCEEEEEEESSCBCTTTTCEEEETTCSSSCCSEEEEECC----CCEEEEECCCCCCGG
T ss_pred CCCcCCeeCCcccc----cCCCCceEEEEEEcccCCCCCCCEEEECCccCCCcccccccCCCCCCCcceeeccccCCCcC
Confidence 34578999986421 1123 7999999999985 5677766 433211100 0 00 11122
Q ss_pred cceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc-eEEEEEecc
Q 028194 158 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG-EKWVATKWI 204 (212)
Q Consensus 158 ~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G-~K~~~~~W~ 204 (212)
..+.+.-++|++|||.. .++|++.|..+. .|+++..-+
T Consensus 226 ~~v~~~~~aGd~~~f~~---------~~~H~s~~N~s~~~R~~~~~~~ 264 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHG---------EVVHKSKQNLSDRSRQAYTFHL 264 (291)
T ss_dssp GCEEECBCTTCEEEEET---------TCEEEECCBCSSSCCCEEEEEE
T ss_pred CeeecccCCCcEEEEcC---------CceecCCCCCCCCceEEEEEEE
Confidence 45778899999999964 899999998874 566655433
No 17
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=95.81 E-value=0.064 Score=44.22 Aligned_cols=127 Identities=10% Similarity=0.013 Sum_probs=66.2
Q ss_pred EEEecCCCCHHHHHHHHHHhccCceecEEeecCCc-eeeeccceeeeceeeeCCCC-C-hhHHHHHHHHHHHHhhCCCCC
Q 028194 10 ALYFPNFASAEQCQSIIATAKKRLKPSQLALRQGE-TVESTKGTRTSSGTFISASE-D-KTGILELIEHKIARATMLPQT 86 (212)
Q Consensus 10 i~~i~~fLs~~ec~~li~~~~~~~~~s~v~~~~g~-~~~~~~~~R~s~~~~l~~~~-~-~~~~~~~l~~ri~~~~g~~~~ 86 (212)
-.+++|++|++|.+.|++..+.....+.+...... .......+|+..-.+ +... + -+.+..++..-+..++|-..-
T Consensus 42 YLvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~s~~lrs~~H~~-~~f~~h~~s~l~~rll~vl~~LlG~el~ 120 (344)
T 3nnf_A 42 YCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAY-DLVKYDFVSSFIQEKLALLNYITGKNLM 120 (344)
T ss_dssp EEEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTSCCCCBCSEEEE-CSSCHHHHHHHHGGGHHHHHHHHTSCEE
T ss_pred eEEEcCCCCHHHHHHHHHHHHHHhhchhhhcccceecCCCccchhcccccc-hhHHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 47899999999999999988753233222110000 000123345321111 1110 1 012334444445555665432
Q ss_pred CCCcceEEecCCCc-ccccccccCCCCCCCCCCCcceEEEEEeecccc--CCccccC
Q 028194 87 HGEAFNVLRYEIGQ-KYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVE--EGGETMF 140 (212)
Q Consensus 87 ~~E~~qv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~--~GGeT~F 140 (212)
... -+...+.||+ -|-||.|...-... ....|-+|+=|=|.+.. .+|...+
T Consensus 121 i~q-s~~fe~kPG~KGFpWH~D~~~F~~~--~~eD~a~S~WIpLd~i~~e~nGGM~~ 174 (344)
T 3nnf_A 121 IMH-NALFSVEPNHKGLPWHVGVGSFSFT--KTEDFGASIWIPLDKITKEHRGGMQY 174 (344)
T ss_dssp EEE-EEEEEECBTCCBSCSBCTTTTTTTB--CTTSCEEEEEEESSCBCTTTBCSEEE
T ss_pred eee-cceEeeCCCCCCCCceecccccccc--cCCCCeEEEEEECCCCCccCCCceEE
Confidence 222 2556778876 49999994321110 12458899999999875 3555554
No 18
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=93.53 E-value=0.3 Score=40.54 Aligned_cols=87 Identities=17% Similarity=0.176 Sum_probs=56.8
Q ss_pred cceEEecCCCc------ccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCCCCCcccCCCCCcccccceEEe
Q 028194 90 AFNVLRYEIGQ------KYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVK 163 (212)
Q Consensus 90 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~ 163 (212)
.+++.+|.+.. ...+|+|.. .+|+|+ .|...|| +.... + ...+.|+
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~--qd~~v~G-LQV~~-~------------g~Wi~V~ 207 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAG------------GIILLF--QDDKVSG-LQLLK-D------------GQWIDVP 207 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSS------------SEEEEE--ESSSCCC-EEEEE-T------------TEEEECC
T ss_pred eeEEEecCCCcccccccccccccCCC------------ceEEEE--ecCCCCe-eeEee-C------------CeEEEcc
Confidence 47899998632 356777753 688884 4434455 33322 1 1568999
Q ss_pred eccCCEEEEe----eeCCCCCcCCCCcccccCCccceEEEEEeccc
Q 028194 164 PRRGDGLLFY----SLFPNGTIDRTSLHGSCPVIKGEKWVATKWIR 205 (212)
Q Consensus 164 P~~G~av~f~----n~~~~g~~d~~~~H~~~pV~~G~K~~~~~W~~ 205 (212)
|..|.+||-- ....||. -..++|++..-..+.||++..+++
T Consensus 208 p~pgalvVNiGD~l~~~SnG~-~kS~~HRVv~~~~~~R~Sia~F~~ 252 (319)
T 1w9y_A 208 PMRHSIVVNLGDQLEVITNGK-YKSVMHRVIAQKDGARMSLASFYN 252 (319)
T ss_dssp CCTTCEEEEECHHHHHHTTTS-SCCCCEEECCCSSSCCEEEEEEEE
T ss_pred cCCCcEEEEhHHHHHHHhCCe-eecccceecCCCCCCceEEEEEec
Confidence 9999888742 1123443 368999998766678999887765
No 19
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=91.07 E-value=0.94 Score=37.31 Aligned_cols=89 Identities=13% Similarity=0.194 Sum_probs=56.4
Q ss_pred CcceEEecCCC---------c-ccccccccCCCCCCCCCCCcceEEEEEeeccccCCc--cccCCCCCCcccCCCCCccc
Q 028194 89 EAFNVLRYEIG---------Q-KYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGG--ETMFPFENGIFLDSGYDYKK 156 (212)
Q Consensus 89 E~~qv~rY~~G---------~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GG--eT~Fp~~~~~~~~~~~~~~~ 156 (212)
-.+++.+|.+- + ...+|+|.. .+|+|+. |...|| .+.... ++
T Consensus 157 ~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g------------~lTlL~q--d~~v~G~~~LqV~~-~g----------- 210 (311)
T 1dcs_A 157 PLLRFRYFPQVPEHRSAEEQPLRMAPHYDLS------------MVTLIQQ--TPCANGFVSLQAEV-GG----------- 210 (311)
T ss_dssp CEEEEEEECC-----------CCEEEEEECS------------SEEEEEE--ECCTTCCCCEEEEE-TT-----------
T ss_pred hhhheecCCCCCcccccCccccccccccCCC------------eEEEEec--CCCCCCceeEEEEe-CC-----------
Confidence 35789999852 1 267888864 5788854 423444 254433 11
Q ss_pred ccceEEeeccCCEEEEe----eeCCCCCcCCCCcccccCCc-----cceEEEEEeccc
Q 028194 157 CIGLKVKPRRGDGLLFY----SLFPNGTIDRTSLHGSCPVI-----KGEKWVATKWIR 205 (212)
Q Consensus 157 ~~~~~v~P~~G~av~f~----n~~~~g~~d~~~~H~~~pV~-----~G~K~~~~~W~~ 205 (212)
..+.|+|.+|.+||-- ....||.. ..++|++.... ...||++..+++
T Consensus 211 -~W~~V~p~pg~lvVNiGD~l~~~TnG~~-kS~~HRVv~~~~~~~~~~~R~Si~~F~~ 266 (311)
T 1dcs_A 211 -AFTDLPYRPDAVLVFCGAIATLVTGGQV-KAPRHHVAAPRRDQIAGSSRTSSVFFLR 266 (311)
T ss_dssp -EEEECCCCTTCEEEEECHHHHHHTTSCS-CCCCEEECCC----CTTCCEEEEEEEEC
T ss_pred -EEEeCcCCCCeEEEEHHHHHHHHhCCcc-cCCCceEeCCCcccCCCCCeEEEEEEEc
Confidence 5689999999988742 11234433 68899997654 457999987765
No 20
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=91.07 E-value=0.88 Score=38.25 Aligned_cols=87 Identities=14% Similarity=0.162 Sum_probs=56.4
Q ss_pred cceEEecCCC------cccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCCCCCcccCCCCCcccccceEEe
Q 028194 90 AFNVLRYEIG------QKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVK 163 (212)
Q Consensus 90 ~~qv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~ 163 (212)
.+++.+|.+. -...+|+|.. .+|+|+. |. .|| +.... ++ ..+.|+
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~q--d~-v~G-LQV~~-~g------------~Wi~V~ 261 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDVS------------ALTFILH--NM-VPG-LQLFY-EG------------KWVTAK 261 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCCS------------SEEEEEE--CS-CCC-EEEEE-TT------------EEEECC
T ss_pred eeeeeecCCCCCcccccCcCCccCCC------------eEEEEEE--cC-CCC-eEEec-CC------------cEEECc
Confidence 4788999863 2366788853 5788854 43 445 33322 11 568999
Q ss_pred eccCCEEEEe----eeCCCCCcCCCCcccccCCccceEEEEEecccc
Q 028194 164 PRRGDGLLFY----SLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRD 206 (212)
Q Consensus 164 P~~G~av~f~----n~~~~g~~d~~~~H~~~pV~~G~K~~~~~W~~~ 206 (212)
|..|.+||-- ..+.||. -..++|++..-....||++..+++-
T Consensus 262 p~pgalvVNiGD~l~~~TnG~-~kS~~HRVv~~~~~~R~Sia~F~~P 307 (356)
T 1gp6_A 262 CVPDSIVMHIGDTLEILSNGK-YKSILHRGLVNKEKVRISWAVFCEP 307 (356)
T ss_dssp CCTTCEEEEECHHHHHHTTTS-SCCCCEEECCCSSCCEEEEEEEEEC
T ss_pred CCCCeEEEEeccHHHHhcCCE-eeccCceecCCCCCCEEEEEEeecC
Confidence 9999988743 1123443 3688999986555689999877653
No 21
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=87.82 E-value=2.6 Score=34.59 Aligned_cols=102 Identities=18% Similarity=0.190 Sum_probs=60.4
Q ss_pred HHHHHhhCCCCCC--------CCcceEEecCCC------cccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccC
Q 028194 75 HKIARATMLPQTH--------GEAFNVLRYEIG------QKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMF 140 (212)
Q Consensus 75 ~ri~~~~g~~~~~--------~E~~qv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~F 140 (212)
+-++..+|++... .-.+++.+|.+- -...+|+|.. .+|+|+ .|. .|| +..
T Consensus 147 ~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g------------~lTlL~--qd~-v~G-LqV 210 (312)
T 3oox_A 147 EAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDIN------------TITLLL--GAE-EGG-LEV 210 (312)
T ss_dssp HHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCS------------SEEEEE--CCT-TSC-EEE
T ss_pred HHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCc------------eEEEEe--EcC-cCc-eEE
Confidence 3344446776431 234788899863 2356788853 578884 452 344 433
Q ss_pred CCCCCcccCCCCCcccccceEEeeccCCEEEEe----eeCCCCCcCCCCcccccCCc----cceEEEEEeccc
Q 028194 141 PFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFY----SLFPNGTIDRTSLHGSCPVI----KGEKWVATKWIR 205 (212)
Q Consensus 141 p~~~~~~~~~~~~~~~~~~~~v~P~~G~av~f~----n~~~~g~~d~~~~H~~~pV~----~G~K~~~~~W~~ 205 (212)
...++ ..+.|+|..|.+||-- ....||. -..++|++.... ...||++..+++
T Consensus 211 ~~~~g------------~W~~V~p~pg~~vVNiGD~l~~~TnG~-~kS~~HRVv~~~~~~~~~~R~Sia~F~~ 270 (312)
T 3oox_A 211 LDRDG------------QWLPINPPPGCLVINIGDMLERLTNNV-LPSTVHRVVNPPPERRGVPRYSTPFFLH 270 (312)
T ss_dssp ECTTS------------CEEECCCCSSCEEEEECHHHHHHTTTS-SCCCCEEECCCCGGGTTSCEEECCEEEC
T ss_pred ECCCC------------cEEECCCCCCeEEEEhHHHHHHHhCCe-ecCCCceEeCCCccCCCCCEEEEEEEec
Confidence 21111 4689999999988742 0123443 368899996432 235998877765
No 22
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=86.54 E-value=2.7 Score=34.80 Aligned_cols=45 Identities=9% Similarity=0.078 Sum_probs=31.4
Q ss_pred ceEEeeccCCEEEEe----eeCCCCCcCCCCcccccCCccceEEEEEeccc
Q 028194 159 GLKVKPRRGDGLLFY----SLFPNGTIDRTSLHGSCPVIKGEKWVATKWIR 205 (212)
Q Consensus 159 ~~~v~P~~G~av~f~----n~~~~g~~d~~~~H~~~pV~~G~K~~~~~W~~ 205 (212)
.+.|+|.+|.+||-- ....||. -..++|++.. ....||++..+++
T Consensus 239 Wi~V~p~pgalvVNiGD~l~~~TnG~-~kS~~HRVv~-~~~~R~Sia~F~~ 287 (331)
T 1odm_A 239 YQDIEADDTGYLINCGSYMAHLTNNY-YKAPIHRVKW-VNAERQSLPFFVN 287 (331)
T ss_dssp EEECCCCTTSEEEEECHHHHHHTTTS-SCCCCEEEEC-CCSCEEEEEEEEC
T ss_pred eEECCCCCCeEEEEccHHHHHHhCCE-eeCCCceeCC-CCCCEEEEEEEEc
Confidence 588999999988742 1123443 3688999964 2457999987765
No 23
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=84.15 E-value=0.93 Score=36.40 Aligned_cols=55 Identities=25% Similarity=0.321 Sum_probs=36.7
Q ss_pred cceEEEEEeeccccCCccccCCCCCCcccCCCCCcccccceEEe-eccCCEEEEeeeCCCCCcCCCCcccccCCcc
Q 028194 120 QRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVK-PRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK 194 (212)
Q Consensus 120 ~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~-P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~ 194 (212)
.-++.++|--+++ +||+|........ ....++ -+.|+++++. |.+.+|.+.||..
T Consensus 171 d~v~v~lv~R~Ni-~GGet~I~~~~~~-----------~~~~~~l~~p~d~llv~--------D~~~~H~vTpI~~ 226 (254)
T 3pl0_A 171 DFVAVVFIGRQGV-RGGETRVFDAAGP-----------QGVRFTLEQPWTVLLLD--------DQQVIHESTPLLP 226 (254)
T ss_dssp SEEEEEEEEEESE-EECCEEEEETTSS-----------EEEEECCCSTTCEEEEE--------TTTEEEEECCEEE
T ss_pred CEEEEEEecCCcc-ccceEEEEcCCCC-----------ccceeEecCCCcEEEEe--------CCcccCCCCcccc
Confidence 4566666666554 5899987654221 233333 3778888885 6789999999975
No 24
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=80.40 E-value=5 Score=32.38 Aligned_cols=87 Identities=16% Similarity=0.156 Sum_probs=54.2
Q ss_pred cceEEecCCCc--------ccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCCCCCcccCCCCCcccccceE
Q 028194 90 AFNVLRYEIGQ--------KYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLK 161 (212)
Q Consensus 90 ~~qv~rY~~G~--------~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~ 161 (212)
-+++.+|.+-. ...+|+|.. .+|+|+ .| ..|| +.....++ ..+.
T Consensus 151 ~lr~~~YP~~~~~~~~~~~g~~~HtD~g------------~lTlL~--qd-~~~G-LqV~~~~g------------~W~~ 202 (280)
T 3on7_A 151 LLRILHYPPMTGDEEMGAIRAAAHEDIN------------LITVLP--TA-NEPG-LQVKAKDG------------SWLD 202 (280)
T ss_dssp EEEEEEECCCCTTCCCCSEEEEEECCCS------------SEEEEE--CC-SCCC-EEEECTTS------------CEEE
T ss_pred eEEEEECCCCCCccccCcccccCCCCCC------------eEEEEE--ec-CCCC-eEEEcCCC------------CEEE
Confidence 47899998531 256788853 578874 44 2344 43321111 4689
Q ss_pred EeeccCCEEEEe----eeCCCCCcCCCCcccccCCc----cceEEEEEeccc
Q 028194 162 VKPRRGDGLLFY----SLFPNGTIDRTSLHGSCPVI----KGEKWVATKWIR 205 (212)
Q Consensus 162 v~P~~G~av~f~----n~~~~g~~d~~~~H~~~pV~----~G~K~~~~~W~~ 205 (212)
|+|.+|.+||-- ....||. -..++|++.... ...||++..+++
T Consensus 203 V~p~pg~~vVNiGD~l~~~Tng~-~kS~~HRVv~~~~~~~~~~R~Si~~F~~ 253 (280)
T 3on7_A 203 VPSDFGNIIINIGDMLQEASDGY-FPSTSHRVINPEGTDKTKSRISLPLFLH 253 (280)
T ss_dssp CCCCTTCEEEEECHHHHHHTTTS-SCCCCEEEECCTTCCTTSCEEECCEEEC
T ss_pred CcCCCCEEEEEcChHHHHHhCCc-ccCCCceEeCCCCCCCCCCeEEEEEEEc
Confidence 999999988742 1123443 368899986542 347999877765
No 25
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=68.10 E-value=4.5 Score=32.13 Aligned_cols=40 Identities=15% Similarity=-0.027 Sum_probs=33.8
Q ss_pred cceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCcc--ceEEEEEeccc
Q 028194 158 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK--GEKWVATKWIR 205 (212)
Q Consensus 158 ~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~--G~K~~~~~W~~ 205 (212)
..+.++=++|++|||.| .+++|+..+-.. +.|+..+.|+.
T Consensus 230 ~~~~~~w~~GD~~i~DN--------~~vlH~R~~f~~~~~~R~l~R~~i~ 271 (273)
T 1nx8_A 230 YYYKHFWEDGDLLIMDN--------RRVIHEREEFNDDDIVRRLYRGQTA 271 (273)
T ss_dssp TEEEECCCTTCEEEEET--------TTEEEEECCCCCTTCEEEEEEEEEE
T ss_pred eEEEeEecCCCEEEEEC--------CeeeeccccCCCCCCCeEEEEeecc
Confidence 35788889999999998 699999999764 47888888875
No 26
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=66.98 E-value=8.7 Score=25.79 Aligned_cols=49 Identities=18% Similarity=0.221 Sum_probs=32.6
Q ss_pred EEEeeccccCCccccCCCCCCcccCCCCCcccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc
Q 028194 125 FLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 195 (212)
Q Consensus 125 ~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G 195 (212)
.+.-+.|..+|+...|...+ ..+.|--..|....|.| ...|.++|+..|
T Consensus 4 ~v~~~~~l~~g~~~~~~~~g-------------~~i~v~r~~g~~~A~~~---------~CpH~g~~L~~g 52 (106)
T 3dqy_A 4 YILRQGDLPPGEMQRYEGGP-------------EPVMVCNVDGEFFAVQD---------TCTHGDWALSDG 52 (106)
T ss_dssp EEEEGGGSCTTCEEEECCSS-------------SCEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred EEEEHHHCCCCCEEEEEECC-------------EEEEEEEECCEEEEEeC---------cCCCCCCCCcCc
Confidence 34456677777665554321 23444447888888876 889999999876
No 27
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=65.32 E-value=4.3 Score=33.90 Aligned_cols=40 Identities=13% Similarity=0.378 Sum_probs=33.3
Q ss_pred ceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCcc----ceEEEEEecccc
Q 028194 159 GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK----GEKWVATKWIRD 206 (212)
Q Consensus 159 ~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~----G~K~~~~~W~~~ 206 (212)
.+.++=++|++|||.| .+++|+..+... +.|+..+.|+..
T Consensus 291 ~~~~~w~pGDivi~DN--------~~vlH~R~~f~d~~~~~~R~L~R~~i~~ 334 (357)
T 2og5_A 291 AVTHRLLPGELAIVDN--------RVTVHGRTEFTPRYDGTDRWLQRTFVLT 334 (357)
T ss_dssp CEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCSCEEEEEEEES
T ss_pred eEEEeeCCCCEEEEeC--------CccccCCCCCCCCCCCCCcEEEEEEEcc
Confidence 4778888999999998 799999988752 379999999864
No 28
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=64.31 E-value=6.9 Score=31.22 Aligned_cols=41 Identities=10% Similarity=0.030 Sum_probs=34.3
Q ss_pred ceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCcc-ceEEEEEeccccc
Q 028194 159 GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK-GEKWVATKWIRDQ 207 (212)
Q Consensus 159 ~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~-G~K~~~~~W~~~~ 207 (212)
.+.++=++|++|||.| .+++|+..+-.. +.|+..+.|+...
T Consensus 235 ~~~~~w~~GDv~i~DN--------~~~lH~r~~f~~~~~R~l~R~~i~~d 276 (283)
T 1otj_A 235 QVRWRWQPNDIAIWDN--------RVTQHYANADYLPQRRIMHRATILGD 276 (283)
T ss_dssp EEEECCCTTCEEEEET--------TSEEEEECCCCTTSCEEEEEEEEECC
T ss_pred EEEeeEcCCCEEEEEC--------cceeecccCCCCCCceEEEEEEEecC
Confidence 4677788999999998 699999999763 5799999998754
No 29
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=64.22 E-value=5 Score=33.36 Aligned_cols=40 Identities=20% Similarity=0.380 Sum_probs=33.5
Q ss_pred ceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCc---cc-eEEEEEecccc
Q 028194 159 GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVI---KG-EKWVATKWIRD 206 (212)
Q Consensus 159 ~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~---~G-~K~~~~~W~~~ 206 (212)
.+.++=++|+++||.| .+++|+..+-. .| .||..+.|+..
T Consensus 296 ~~~~~w~pGDv~i~DN--------r~vlH~R~~f~~~~~~~~R~L~R~~i~~ 339 (358)
T 2wbq_A 296 LYELVLDQGDVAFIDN--------RRAVHGRRAFQPRYDGRDRWLKRINITR 339 (358)
T ss_dssp CEEEECCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEES
T ss_pred ceEEeecCCCEEEEeC--------cccccCCCCCCCCCCCCCceEEEEEEec
Confidence 5778889999999998 79999988865 24 69999999864
No 30
>4aiv_A Probable nitrite reductase [NAD(P)H] small subuni; oxidoreductase, nitrite metabolism; 2.00A {Mycobacterium tuberculosis}
Probab=58.82 E-value=19 Score=24.92 Aligned_cols=55 Identities=7% Similarity=0.006 Sum_probs=35.8
Q ss_pred cceEEEEEeeccccCCccccCCCCCCcccCCCCCcccccc-eEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc
Q 028194 120 QRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIG-LKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 195 (212)
Q Consensus 120 ~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~-~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G 195 (212)
-+.+.-+.-+.|..+|+...+....+ .. +-++...|.+-.+.| ...|.+.|+.+|
T Consensus 7 ~~~W~~Vc~~~dL~~g~~~~~~~~~G------------~~v~l~r~~dG~v~A~~n---------~CpH~ga~L~~~ 62 (119)
T 4aiv_A 7 IQVWTTACAYDHLIPGRGVGVLLDDG------------SQVALFRLDDGSVHAVGN---------VDPFSGAAVMSR 62 (119)
T ss_dssp EEEEEEEEEGGGSCTTCCEEEECTTS------------CEEEEEECTTSCEEEEES---------BCTTTCCBCGGG
T ss_pred ccceeEeeEHHHcCCCCceEEEEcCC------------cEEEEEEcCCCeEEEEEC---------CCCCCCCccccC
Confidence 35677888888887775444432211 12 334556677777765 899999998765
No 31
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=58.33 E-value=6.8 Score=32.03 Aligned_cols=40 Identities=25% Similarity=0.435 Sum_probs=33.1
Q ss_pred ceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCcc---c-eEEEEEecccc
Q 028194 159 GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK---G-EKWVATKWIRD 206 (212)
Q Consensus 159 ~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~---G-~K~~~~~W~~~ 206 (212)
.+.++=++|++|||.| .+++|+-.+... | .|+....|+..
T Consensus 259 ~~~~~w~~GDv~i~DN--------~~~lH~R~~f~~~~~~~~R~L~R~~v~~ 302 (324)
T 1ds1_A 259 TEAVYLEPGDLLIVDN--------FRTTHARTPFSPRWDGKDRWLHRVYIRT 302 (324)
T ss_dssp CEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEEC
T ss_pred cEEEeeCCCCEEEEeC--------CceeecCCccCCCCCCCCcEEEEEEEec
Confidence 5778889999999998 699999888753 2 79999999753
No 32
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=57.03 E-value=4 Score=35.48 Aligned_cols=37 Identities=24% Similarity=0.501 Sum_probs=28.9
Q ss_pred eEEee--ccCCEEEEeeeCCCCCcCCCCcccccCCccceEEEEEeccc
Q 028194 160 LKVKP--RRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIR 205 (212)
Q Consensus 160 ~~v~P--~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G~K~~~~~W~~ 205 (212)
+...| ++|+.|+|.+ ++.|++.|+..|..+....++-
T Consensus 365 mv~iP~vePGD~V~WH~---------D~iH~V~~~h~g~~~s~V~YIp 403 (461)
T 2dbn_A 365 LTSIPKLEAGDSVWWHC---------DVIHSVAPVENQQGWGNVMYIP 403 (461)
T ss_dssp CEECCCBCTTCEEEEET---------TCCEEECCBSSCCSCCCEEECC
T ss_pred eeeCCCCCCCCEEEEcC---------CCccccccCCCCCcceeEEEec
Confidence 34444 6899999965 9999999999998776666554
No 33
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=54.99 E-value=8 Score=32.69 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=34.2
Q ss_pred cceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCcc--c-eEEEEEecccc
Q 028194 158 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK--G-EKWVATKWIRD 206 (212)
Q Consensus 158 ~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~--G-~K~~~~~W~~~ 206 (212)
..+.++=++|+++||.| .+++|+..+-.. | .|+....|+..
T Consensus 327 ~~~~~~~~pGd~vi~DN--------r~~lH~R~~f~~~~~~~R~L~r~yi~~ 370 (388)
T 3o2g_A 327 SKFTFKMNPGDVITFDN--------WRLLHGRRSYEAGTEISRHLEGAYADW 370 (388)
T ss_dssp TCEEECCCTTCEEEEET--------TTEEEEECCCCCCSSCSCEEEEEEECH
T ss_pred hEEEEEcCCCcEEEEeC--------cEEeeCCCCcCCCCCCCEEEEEEEEcc
Confidence 34888889999999998 799999988764 4 79999999853
No 34
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=53.81 E-value=26 Score=23.39 Aligned_cols=51 Identities=16% Similarity=0.110 Sum_probs=32.5
Q ss_pred EEEEEeeccccCCccccCCCCCCcccCCCCCccccc-ceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc
Q 028194 123 ASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCI-GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 195 (212)
Q Consensus 123 ~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~-~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G 195 (212)
+..+.-+.+..+|+...|...+. . -+-++- .|....|.| ...|.++|+..|
T Consensus 4 w~~v~~~~~l~~g~~~~~~~~g~------------~~v~v~r~-~g~~~A~~~---------~CpH~g~~L~~g 55 (108)
T 2i7f_A 4 KLRLCQVASVKDGEPVAVYQEKM------------PALAVYNV-DGEVFVTDN---------LCTHGNAMLTDG 55 (108)
T ss_dssp EEEEEEGGGCBTTBCEEECCTTS------------SCEEEEEE-TTEEEEEES---------BCSSSSCBGGGS
T ss_pred cEEEEEHhHcCCCCeEEEEECCe------------eEEEEEEE-CCEEEEEeC---------cCCCCCCCCCCC
Confidence 34455677777776555543210 1 233344 788888876 899999999776
No 35
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=52.58 E-value=54 Score=24.96 Aligned_cols=77 Identities=14% Similarity=0.017 Sum_probs=52.4
Q ss_pred cceEEecCCCcccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCCCCCcccCCCCCcccccceEEeeccCCE
Q 028194 90 AFNVLRYEIGQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDG 169 (212)
Q Consensus 90 ~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~P~~G~a 169 (212)
...+.+-.+|.+-.+|.|.. +-.+++.+=|--+.+| ..|.. .+....=+.|.+
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~----------n~~lR~HL~L~~p~~~--~~i~V---------------~~~~~~w~eGe~ 155 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPT----------NCRLRMHLGLVIPKEG--CKIRC---------------ANETKTWEEGKV 155 (197)
T ss_dssp EEEEEEECTTEEEEEECCSC----------TTEEEEEEEEECCSSS--EEEEE---------------TTEEECCCBTCE
T ss_pred eEEEEEeCCCCCcCCeeCCC----------CCeEEEEEEEEeCCCC--cEEEE---------------CCEEEEeeCCcE
Confidence 56889999999999999953 2345555555544322 11211 344556678999
Q ss_pred EEEeeeCCCCCcCCCCcccccCCccceEEEEEe
Q 028194 170 LLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATK 202 (212)
Q Consensus 170 v~f~n~~~~g~~d~~~~H~~~pV~~G~K~~~~~ 202 (212)
++| |....|++---..+.|+++-.
T Consensus 156 ~~f---------Dds~~Hev~N~~d~~RvvL~~ 179 (197)
T 3rcq_A 156 LIF---------DDSFEHEVWQDASSFRLIFIV 179 (197)
T ss_dssp EEE---------CTTSCEEEEECSSSCEEEEEE
T ss_pred EEE---------cCCeEEEEEECCCCCEEEEEE
Confidence 999 568899997777778877644
No 36
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=51.77 E-value=13 Score=25.31 Aligned_cols=24 Identities=38% Similarity=0.692 Sum_probs=20.1
Q ss_pred EeeccCCEEEEeeeCCCCCcCCCCcccccCCccceEEEEEecccc
Q 028194 162 VKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRD 206 (212)
Q Consensus 162 v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G~K~~~~~W~~~ 206 (212)
.+|++|+.|+| .|..|+++.|-+.
T Consensus 62 YrP~r~D~Vv~---------------------~Gk~y~Vtr~~~~ 85 (102)
T 2pp6_A 62 VIPRRGDRVVL---------------------RGSEFTVTRIRRF 85 (102)
T ss_dssp CCCCTTCEEEE---------------------TTEEEEEEEEEEE
T ss_pred cccCCCCEEEE---------------------cCcEEEEEEEEEE
Confidence 68999999999 4889999888553
No 37
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=51.57 E-value=14 Score=25.47 Aligned_cols=51 Identities=14% Similarity=0.082 Sum_probs=34.3
Q ss_pred EEEEEeeccccCCccccCCCCCCcccCCCCCcccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc
Q 028194 123 ASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 195 (212)
Q Consensus 123 ~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G 195 (212)
+..+.-+.|..+|+...|...+ ..+.|--..|....|.| .+.|.++|+..|
T Consensus 11 w~~v~~~~el~~g~~~~~~~~g-------------~~v~v~r~~g~~~A~~n---------~CpH~g~~L~~G 61 (121)
T 3gce_A 11 PVRVATLDQLKPGVPTAFDVDG-------------DEVMVVRDGDSVYAISN---------LCSHAEAYLDMG 61 (121)
T ss_dssp CEEEEEGGGSCTTCCEEEEETT-------------EEEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred cEEEEEHHHCCCCCEEEEEECC-------------EEEEEEEECCEEEEEeC---------cCCCCCCCCCCC
Confidence 4556678888777766664321 22333335788888876 889999999877
No 38
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=51.53 E-value=9.5 Score=30.82 Aligned_cols=43 Identities=16% Similarity=0.115 Sum_probs=33.4
Q ss_pred cceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc-eEEEEEecccccc
Q 028194 158 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG-EKWVATKWIRDQE 208 (212)
Q Consensus 158 ~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G-~K~~~~~W~~~~~ 208 (212)
..++.+=++|++|||.| .+++|...+-..+ .|+.-+.|+....
T Consensus 240 ~~~~~~w~~GDlviwDN--------r~vlH~r~~~~~~~~R~l~R~~i~gd~ 283 (293)
T 3eat_X 240 AHYAHRWRSDDLVIADN--------LTLLHGREAFAHRAPRHLRRVHIHAEP 283 (293)
T ss_dssp TEEEECCCTTCEEEEET--------TTEEEEECCBSSCCCEEEEEEEEEEEE
T ss_pred cEEEEEcCCCCEEEEeC--------CceEEcccCCCCCCceEEEEEEEcCCc
Confidence 34777788999999998 7999999876543 5788888876543
No 39
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=51.45 E-value=19 Score=24.26 Aligned_cols=28 Identities=14% Similarity=0.132 Sum_probs=21.2
Q ss_pred eEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccce
Q 028194 160 LKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGE 196 (212)
Q Consensus 160 ~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G~ 196 (212)
+-++-..|....|.| ...|.++|+..|.
T Consensus 28 ~v~r~~~g~~~A~~~---------~CpH~g~~L~~g~ 55 (111)
T 1vm9_A 28 LIVNSEEHGVKAYQA---------MCPHQEILLSEGS 55 (111)
T ss_dssp EEEEETTTEEEEEES---------BCSSSSCBGGGSE
T ss_pred EEEEeCCCeEEEEeC---------cCCCCCcCCCCce
Confidence 445556788888876 8999999988763
No 40
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=47.79 E-value=28 Score=26.26 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=30.1
Q ss_pred cccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccceEEEEEecc
Q 028194 156 KCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWI 204 (212)
Q Consensus 156 ~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G~K~~~~~W~ 204 (212)
+...+.+.-++|++|+.+. ..+|.+.-+ +.-.++|.|+
T Consensus 197 ~~~~~~~~l~pGD~LyiP~---------gW~H~V~~l--~~sisvn~w~ 234 (235)
T 4gjz_A 197 KAPFLSCILSPGEILFIPV---------KYWHYVRAL--DLSFSVSFWW 234 (235)
T ss_dssp GCCCEEEEECTTCEEEECT---------TCEEEEEES--SSEEEEEEEE
T ss_pred CCCcEEEEECCCCEEEeCC---------CCcEEEEEC--CCEEEEEEec
Confidence 3456788899999999985 789999876 3467888886
No 41
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=46.79 E-value=13 Score=29.62 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=20.6
Q ss_pred cEEEecCCCCHHHHHHHHHHhcc
Q 028194 9 RALYFPNFASAEQCQSIIATAKK 31 (212)
Q Consensus 9 ~i~~i~~fLs~~ec~~li~~~~~ 31 (212)
..+++++||+++||++|.+.+..
T Consensus 16 Gyvvl~~~l~~e~v~~l~~~~~~ 38 (291)
T 2opw_A 16 GFLVLEGFLSAEECVAMQQRIGE 38 (291)
T ss_dssp SEEEETTSSCHHHHHHHHHHHHH
T ss_pred CEEEecCCCCHHHHHHHHHHHHH
Confidence 56899999999999999998865
No 42
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=46.75 E-value=13 Score=29.67 Aligned_cols=36 Identities=19% Similarity=0.147 Sum_probs=25.2
Q ss_pred cccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCC
Q 028194 100 QKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFP 141 (212)
Q Consensus 100 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp 141 (212)
+...||.|..... ..-.+++|.-+.-+..||+|.|-
T Consensus 92 ~~~~wH~D~sy~~------~pp~~~~l~~~~~p~~GG~T~~~ 127 (277)
T 3pvj_A 92 DNAVWHTDVTFLP------TPALGAVLSAKQLPAYGGDTLWA 127 (277)
T ss_dssp GGSSCBCTTTTSS------SCCCEEEEEEEECCSSCCCEEEE
T ss_pred cCCCceeeCCCcC------CCCceEEEEeeccCCCCCCcEee
Confidence 4577999987642 22346666666677789999874
No 43
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=44.57 E-value=16 Score=29.08 Aligned_cols=35 Identities=17% Similarity=0.135 Sum_probs=24.5
Q ss_pred cccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCC
Q 028194 102 YDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPF 142 (212)
Q Consensus 102 y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 142 (212)
-.+|+|..... ..-.+++|.-+.-+..||+|.|-+
T Consensus 96 ~~wHtD~sy~~------~pp~~~~L~c~~~p~~GG~T~~~d 130 (283)
T 1otj_A 96 DNWHTDVTFIE------TPPAGAILAAKELPSTGGDTLWTS 130 (283)
T ss_dssp CSCBCTTTTSS------SCEEEEEEEEEECCSSCCCEEEEE
T ss_pred CCcEeeccCcc------CCCceEEEEEEecCCCCCcceeee
Confidence 35999987632 234566666666778899999855
No 44
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=42.00 E-value=34 Score=22.52 Aligned_cols=27 Identities=19% Similarity=0.135 Sum_probs=20.4
Q ss_pred eEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccce
Q 028194 160 LKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGE 196 (212)
Q Consensus 160 ~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G~ 196 (212)
+-++ ..|....|.| ...|.++|+..|.
T Consensus 29 ~v~r-~~g~~~A~~~---------~CpH~g~~L~~g~ 55 (103)
T 2qpz_A 29 ALYE-VEGEIYATDN---------LCTHGSARMSDGY 55 (103)
T ss_dssp EEEE-ETTEEEEEES---------BCSSSSCBGGGSE
T ss_pred EEEE-ECCEEEEECC---------cCCCCCCCCCCCe
Confidence 3445 7788888876 8999999987663
No 45
>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B*
Probab=40.95 E-value=29 Score=23.32 Aligned_cols=49 Identities=16% Similarity=0.158 Sum_probs=30.6
Q ss_pred EEEEeeccccCCccccCCCCCCcccCCCCCcccccce-EEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc
Q 028194 124 SFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGL-KVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 195 (212)
Q Consensus 124 T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~-~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G 195 (212)
..+.-+++..+|+...|...+ ..+ -++. .|....|.| ...|.++|+..|
T Consensus 7 ~~v~~~~~l~~g~~~~~~~~g-------------~~i~v~r~-~g~~~A~~n---------~CpH~g~~L~~g 56 (112)
T 1fqt_A 7 TRVCDRRDVPEGEALKVESGG-------------TSVAIFNV-DGELFATQD---------RCTHGDWSLSDG 56 (112)
T ss_dssp EEEEEGGGSCTTCEEEEEETT-------------EEEEEEEE-TTEEEEEES---------BCTTSSCBSSTT
T ss_pred EEeEeHHHCCCCCeEEEEECC-------------EEEEEEEE-CCEEEEEEC---------CCCCCCcCCCCC
Confidence 345566777666555543311 122 3343 788888876 899999998776
No 46
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=40.25 E-value=19 Score=28.90 Aligned_cols=38 Identities=21% Similarity=0.171 Sum_probs=25.1
Q ss_pred CcccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCC
Q 028194 99 GQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPF 142 (212)
Q Consensus 99 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 142 (212)
+....+|.|..... ..-.+++|.=+.-+..||+|.|-+
T Consensus 102 ~~~~~wHtD~sy~~------~pP~~~~L~c~~~p~~GG~T~~ad 139 (301)
T 1oih_A 102 QRANSWHTDVTFVE------AYPKASILRSVVAPASGGDTVWAN 139 (301)
T ss_dssp -CCCSCBCTTTTSS------SCCSEEEEEEEECCSSCCCEEEEE
T ss_pred CcCcCCEecccCcC------CCCceEEEEEeecCCCCCcccccc
Confidence 34567999987642 223566666666677899998743
No 47
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=39.91 E-value=23 Score=28.46 Aligned_cols=41 Identities=12% Similarity=0.074 Sum_probs=33.6
Q ss_pred cceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCcc-ceEEEEEecccc
Q 028194 158 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIK-GEKWVATKWIRD 206 (212)
Q Consensus 158 ~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~-G~K~~~~~W~~~ 206 (212)
..+.++=++|++|||.| .+++|...+-.. +.|+..+.|+..
T Consensus 243 ~~~~~~w~~GDvvi~DN--------r~~lH~r~~f~~~~~R~l~R~~i~g 284 (301)
T 1oih_A 243 NTVRWRWEAGDVAIWDN--------RATQHYAVDDYGTQPRIVRRVTLAG 284 (301)
T ss_dssp GEEEECCCTTCEEEEET--------TSEEEEECCCCTTSCCEEEEEEECC
T ss_pred ceEEEEEcCCCEEEEEc--------cceeecccCCCCCCceEEEEEEEeC
Confidence 45778888999999998 699999998764 378888888864
No 48
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=39.87 E-value=15 Score=29.90 Aligned_cols=33 Identities=30% Similarity=0.344 Sum_probs=26.2
Q ss_pred ceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccceEEEE
Q 028194 159 GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVA 200 (212)
Q Consensus 159 ~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G~K~~~ 200 (212)
.+.++=++|++|||.| .+++|+..|- .|.+.++
T Consensus 293 ~~~~~w~~GDv~i~DN--------~~~lH~R~~f-~g~rR~l 325 (330)
T 2q4a_A 293 CVAVPWQRGDVLLIDN--------WAVLHSRRPF-DPPRRVL 325 (330)
T ss_dssp CBCCCCCTTCEEEEET--------TTEEEEECCE-ESCCEEE
T ss_pred EeecCCCCCCEEEEec--------ccccccCCCC-CCCceEE
Confidence 4677778999999998 6999999994 5754444
No 49
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=39.69 E-value=18 Score=29.43 Aligned_cols=36 Identities=25% Similarity=0.204 Sum_probs=24.5
Q ss_pred cccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCC
Q 028194 100 QKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFP 141 (212)
Q Consensus 100 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp 141 (212)
....||.|..... ..-.+++|.-+.-+..||+|.|-
T Consensus 98 ~~~~wH~D~s~~~------~pp~~~~l~~~~~p~~GG~T~fa 133 (301)
T 3r1j_A 98 KATRWHTDVTFAA------NYPAASILRAVTLPSYGGSTLWA 133 (301)
T ss_dssp -CCSCBCTTTTSS------SCCSEEEEEEEECCSSCCCEEEE
T ss_pred CCCCCccccCCcc------CCCceeEEEEeecCCCCCCCeeE
Confidence 4567999987642 22346666666667789999874
No 50
>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D*
Probab=38.79 E-value=30 Score=23.46 Aligned_cols=50 Identities=18% Similarity=0.044 Sum_probs=29.8
Q ss_pred EEEEeeccccCCccccCCCCCCcccCCCCCccccc-ceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc
Q 028194 124 SFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCI-GLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 195 (212)
Q Consensus 124 T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~-~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G 195 (212)
..+.-+.+..+|+...|...+ . .+.|--..|....|.| ...|.++|+..|
T Consensus 6 ~~v~~~~el~~g~~~~~~~~g-------------~~~v~v~r~~g~~~A~~n---------~CpH~g~~L~~g 56 (115)
T 2de6_D 6 LKVCAASDMQPGTIRRVNRVG-------------AAPLAVYRVGDQFYATED---------TCTHGIASLSEG 56 (115)
T ss_dssp EEEEEGGGCCTTEEEEEEETT-------------EEEEEEEEETTEEEEEES---------BCTTSSCBGGGS
T ss_pred EEeEEHHHCCCCCeEEEEECC-------------ccEEEEEEECCEEEEEeC---------CCCCCCCCCcCC
Confidence 344556676666655553311 2 2222222777777766 899999998766
No 51
>1rie_A Rieske iron-sulfur protein; oxidoreductase, cytochrome BC1 complex, histidine ligands, rieske iron-sulfur cluster, electron transport; 1.50A {Bos taurus} SCOP: b.33.1.1
Probab=38.02 E-value=27 Score=24.46 Aligned_cols=21 Identities=14% Similarity=0.300 Sum_probs=17.6
Q ss_pred cCCEEEEeeeCCCCCcCCCCcccccCCccc
Q 028194 166 RGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 195 (212)
Q Consensus 166 ~G~av~f~n~~~~g~~d~~~~H~~~pV~~G 195 (212)
.|....|.| .+.|.+||+..|
T Consensus 62 ~g~~~a~~~---------~C~H~g~~l~~g 82 (129)
T 1rie_A 62 KPEWVILIG---------VCTHLGCVPIAN 82 (129)
T ss_dssp STTEEEEEC---------CCTTTSCCCEET
T ss_pred CCeEEEEEC---------ccCCCCeecccc
Confidence 688888876 899999998765
No 52
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=37.01 E-value=20 Score=29.23 Aligned_cols=38 Identities=21% Similarity=0.149 Sum_probs=25.5
Q ss_pred CcccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCC
Q 028194 99 GQKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPF 142 (212)
Q Consensus 99 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 142 (212)
+....+|+|..... ..-.+++|.=+.-+..||+|.|-+
T Consensus 114 ~~~~~~HtD~sy~~------~pP~~~~L~c~~~p~~GG~T~~ad 151 (330)
T 2q4a_A 114 DQKIPFHHEMAQVR------EFPSKLFFYCEIEPKCGGETPIVL 151 (330)
T ss_dssp TSCEEEECTTTTST------TCCSEEEEEEEECCSEECCCCEEE
T ss_pred ccccccccccCCCC------CCCceEEEECcCCCCcCCceeeec
Confidence 45667999987542 122456666666677899998854
No 53
>3azc_A Cytochrome B6-F complex iron-sulfur subunit; rieske, thermosynechococcus elongatu photosynthesis, electron transport; 2.00A {Thermosynechococcus elongatus}
Probab=43.19 E-value=7.2 Score=27.87 Aligned_cols=57 Identities=12% Similarity=0.014 Sum_probs=37.8
Q ss_pred CcceEEEEEeeccccCCccccCCCCCCcccCCCCCcccccceEEeeccCC--EEEEeeeCCCCCcCCCCcccccCCccc
Q 028194 119 SQRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGD--GLLFYSLFPNGTIDRTSLHGSCPVIKG 195 (212)
Q Consensus 119 ~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~P~~G~--av~f~n~~~~g~~d~~~~H~~~pV~~G 195 (212)
.-.-+|+.-||.+...|+...+...-+. ..+.|+-..|. +..|.| .+.|.++|+..|
T Consensus 13 ~g~~v~~~~~~~~l~~g~~~~v~~l~g~-----------~~vlv~~~~G~~~v~A~~n---------~CpH~g~~L~~g 71 (133)
T 3azc_A 13 LGNDIKVSEYLAKHLPGDRSLAQGIKGD-----------PTYVIVTEDHQIANYGLNA---------VCTHLGCVVPWN 71 (133)
Confidence 3456778888999888877666521110 23455556676 666665 888999998765
No 54
>1rfs_A Rieske protein; iron-sulfur protein, electron transport; 1.83A {Spinacia oleracea} SCOP: b.33.1.1 PDB: 1q90_C*
Probab=36.02 E-value=13 Score=26.67 Aligned_cols=27 Identities=15% Similarity=0.000 Sum_probs=16.6
Q ss_pred eEEeeccCCE--EEEeeeCCCCCcCCCCcccccCCccc
Q 028194 160 LKVKPRRGDG--LLFYSLFPNGTIDRTSLHGSCPVIKG 195 (212)
Q Consensus 160 ~~v~P~~G~a--v~f~n~~~~g~~d~~~~H~~~pV~~G 195 (212)
+.|+-..|.+ ..|.| .+.|.++|+..|
T Consensus 49 ilv~~~~G~i~~~A~~n---------~CpH~g~~L~~g 77 (139)
T 1rfs_A 49 YLVVESDKTLATFGINA---------VCTHLGCVVPFN 77 (139)
T ss_dssp EEEBCTTSSBCSEEEEC---------BCTTTCCBCCEE
T ss_pred EEEEeCCCcEEEEEEeC---------cCCCCCCCCccC
Confidence 3444455555 44544 788888888654
No 55
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=34.02 E-value=22 Score=28.01 Aligned_cols=37 Identities=22% Similarity=-0.076 Sum_probs=24.5
Q ss_pred cccccccccCCCCCCCCCCCcceEEEEEeecccc--CCccccCCC
Q 028194 100 QKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVE--EGGETMFPF 142 (212)
Q Consensus 100 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~--~GGeT~Fp~ 142 (212)
....+|+|..... ..-.+++|.=+.-+. +||+|.|-+
T Consensus 96 ~~~~~HtD~sy~~------~pp~~~~L~c~~~p~~~~GG~T~~~d 134 (273)
T 1nx8_A 96 GQLPFHADGGLLL------SQVDQVFLYAAEIKNVKFRGATTVCD 134 (273)
T ss_dssp SCEEEECTTTTTT------CCCCEEEEEEEEEESCSSSSCEEEEE
T ss_pred cCCCCcCCCCCcc------CCCeeEEEEeEeCCCCCCCCcchhhh
Confidence 3566999987532 123455555566666 899999865
No 56
>3c0d_A Putative nitrite reductase NADPH (small subunit) oxidoreductase protein; NESG, VPR162, Q87HB1, XRAY, structure; 2.40A {Vibrio parahaemolyticus rimd 2210633} SCOP: b.33.1.3
Probab=29.79 E-value=43 Score=22.84 Aligned_cols=52 Identities=12% Similarity=-0.105 Sum_probs=33.0
Q ss_pred EEEEEeeccccCCccccCCCCCCcccCCCCCcccccceEEeeccCCEEEEeeeCCCCCcCCCCccccc-CCccc
Q 028194 123 ASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSC-PVIKG 195 (212)
Q Consensus 123 ~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~-pV~~G 195 (212)
+..+.-+.+..+|+...|...+. .-+-++-..|.+..|.| .+.|.++ |+..|
T Consensus 6 w~~v~~~~el~~g~~~~~~~~g~------------~v~v~r~~~G~~~A~~n---------~CpH~g~~~L~~G 58 (119)
T 3c0d_A 6 KVKLCQLDDLMPFIGATVLIEGE------------RVALFYIPDSGVYAVQD---------WDPIGKAYVMSRG 58 (119)
T ss_dssp EEEEEEGGGSCBTCCEEEEETTE------------EEEEEEETTTEEEEEES---------EETTTTEECGGGS
T ss_pred cEEEEEHHHCCCCCeEEEEECCe------------EEEEEEecCCeEEEEeC---------CCCCCCCccCCCe
Confidence 45566677777766555533110 12344556788888876 8899888 77766
No 57
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=28.90 E-value=52 Score=27.19 Aligned_cols=43 Identities=16% Similarity=0.210 Sum_probs=35.2
Q ss_pred ccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCc-cceEEEEEecccccc
Q 028194 157 CIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVI-KGEKWVATKWIRDQE 208 (212)
Q Consensus 157 ~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~-~G~K~~~~~W~~~~~ 208 (212)
+..+.+.-++|++|+.+. ..+|.+..+. .+.-.++|.|++...
T Consensus 258 ~~~~~~~l~pGD~LyiP~---------gWwH~V~~l~d~~~sisvn~w~~~~~ 301 (349)
T 3d8c_A 258 VVGYETVVGPGDVLYIPM---------YWWHHIESLLNGGITITVNFWYKGAP 301 (349)
T ss_dssp CCEEEEEECTTCEEEECT---------TCEEEEEECTTSCCEEEEEEEEECCC
T ss_pred CCcEEEEECCCCEEEECC---------CCcEEEEEcCCCCcEEEEEEEcCCCC
Confidence 346788889999999985 8999999987 467889999987543
No 58
>2jo6_A Nitrite reductase [NAD(P)H] small subunit; all beta, ISP domain, rieske iron-sulfur protein, 3-layer sandwich, structural genomics, PSI-2; NMR {Escherichia coli} SCOP: b.33.1.3
Probab=28.61 E-value=51 Score=22.08 Aligned_cols=52 Identities=6% Similarity=-0.042 Sum_probs=30.9
Q ss_pred EEEEEeeccccCCccccCCCCCCcccCCCCCcccccceEEeeccC-CEEEEeeeCCCCCcCCCCccccc-CCccc
Q 028194 123 ASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRG-DGLLFYSLFPNGTIDRTSLHGSC-PVIKG 195 (212)
Q Consensus 123 ~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~P~~G-~av~f~n~~~~g~~d~~~~H~~~-pV~~G 195 (212)
+..+.-+++..+|+...|...+. .-+-++-..| .+..|.| ...|.++ |+..|
T Consensus 7 w~~v~~~~el~~g~~~~~~~~g~------------~i~v~r~~~g~~~~A~~n---------~CpH~g~~~L~~G 60 (113)
T 2jo6_A 7 WKDICKIDDILPETGVCALLGDE------------QVAIFRPYHSDQVFAISN---------IDPFFESSVLSRG 60 (113)
T ss_dssp CEEEEETTTSCTTEEEEEEETTE------------EEEEEECSSSSCCEEEES---------SCSSSCCSCSTTS
T ss_pred heEEeeHHHCCCCCeEEEEECCE------------EEEEEEECCCCEEEEEeC---------cCCCCCCcccCCe
Confidence 34455666766665554432110 1233455577 5777766 8999999 78765
No 59
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=28.31 E-value=38 Score=27.84 Aligned_cols=37 Identities=19% Similarity=0.025 Sum_probs=23.8
Q ss_pred cccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCCC
Q 028194 100 QKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPFE 143 (212)
Q Consensus 100 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~ 143 (212)
+...+|+|..... ..-.+++|.-|..+. ||+|.|-..
T Consensus 163 ~~l~~HtD~sy~~------~pp~~~~L~cl~~p~-gG~T~~ad~ 199 (358)
T 2wbq_A 163 QELGWHTEDAFSP------YRADYVGLLSLRNPD-GVATTLAGV 199 (358)
T ss_dssp SCEEEECTTTTCT------TCCSEEEEEEEECTT-CCEEEEEEC
T ss_pred CCccccccCCCCC------CCCCeEEEEeEecCC-CCCceEEec
Confidence 3457999987532 122455665566666 899998653
No 60
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=27.87 E-value=41 Score=27.76 Aligned_cols=37 Identities=14% Similarity=-0.000 Sum_probs=24.5
Q ss_pred cccccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCC
Q 028194 100 QKYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPF 142 (212)
Q Consensus 100 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 142 (212)
....+|+|..... ..-.+++|.-|..+.+||+|.|-.
T Consensus 174 ~~l~~HtD~sy~~------~pP~~~~L~cl~~~~~GG~t~~~~ 210 (357)
T 2og5_A 174 TLLTFHNENAFHE------HRPDFVMLLCLRADPTGRAGLRTA 210 (357)
T ss_dssp SCEEEECTTTTCT------TCCSEEEEEEEECCTTSCCCEEEE
T ss_pred ccccccccCCCCC------CCCCeEEEEEEccCCCCCccEEEe
Confidence 3456899987532 223466666677778899987643
No 61
>2jza_A Nitrite reductase [NAD(P)H] small subunit; ISP domain, rieske iron-sulfur protein, 3-layer beta- sandwich; NMR {Pectobacterium atrosepticum SCRI1043} SCOP: b.33.1.3
Probab=27.81 E-value=59 Score=22.52 Aligned_cols=52 Identities=13% Similarity=0.108 Sum_probs=30.0
Q ss_pred EEEEEeeccccCCccccCCCCCCcccCCCCCcccccceEEeeccC-CEEEEeeeCCCCCcCCCCcccccC-Cccc
Q 028194 123 ASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRG-DGLLFYSLFPNGTIDRTSLHGSCP-VIKG 195 (212)
Q Consensus 123 ~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~P~~G-~av~f~n~~~~g~~d~~~~H~~~p-V~~G 195 (212)
+..+.-+.+..+|+...|...+. .-+-++-..| .+..|.| .+.|.+++ +..|
T Consensus 4 w~~v~~~~el~~g~~~~~~~~g~------------~i~v~r~~~g~~v~A~~n---------~CpH~g~~~L~~G 57 (130)
T 2jza_A 4 WTTVCKLDDILPGTGVCALVEQQ------------QIAVFRPRNDEQVYAISN---------IDPFAQASVLSRG 57 (130)
T ss_dssp EEEEEETTTSCTTBCCEEEETTE------------EEEEEBCSSSSCCEEEBC---------CCTTTSSGGGTSS
T ss_pred eEEEEEHHHCCCCCeEEEEECCc------------EEEEEEECCCCEEEEEeC---------cCCCCCCCcCCCc
Confidence 34455666766665444432110 1233444466 6777766 89999994 7766
No 62
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=27.63 E-value=36 Score=28.55 Aligned_cols=35 Identities=14% Similarity=0.071 Sum_probs=24.4
Q ss_pred cccccccCCCCCCCCCCCcceEEEEEeeccccCCccccCCC
Q 028194 102 YDSHYDAFNPAEYGPQMSQRLASFLLYLSDVEEGGETMFPF 142 (212)
Q Consensus 102 y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 142 (212)
..+|+|..... ..-.+++|.-+.-+..||+|.|-+
T Consensus 200 l~~HtD~sy~~------~pp~~~~L~c~~~~~~GG~T~~~d 234 (388)
T 3o2g_A 200 LSFHTDYPALH------HPPGVQLLHCIKQTVTGGDSEIVD 234 (388)
T ss_dssp EEEECSCTTSS------SCCSEEEEEEEECCSSSCCEEEEE
T ss_pred cccccCCCccC------CCCcEEEEEEEecCCCCCcCeeec
Confidence 45899987642 223456776777778999999854
No 63
>4aay_B AROB; oxidoreductase, rieske, iron sulfur, molybdopterin; HET: MGD; 2.70A {Rhizobium species}
Probab=27.02 E-value=69 Score=23.73 Aligned_cols=22 Identities=23% Similarity=0.262 Sum_probs=17.6
Q ss_pred ccCCEEEEeeeCCCCCcCCCCcccccCCccc
Q 028194 165 RRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 195 (212)
Q Consensus 165 ~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G 195 (212)
..|....|.| .+.|.++|+..|
T Consensus 92 ~~G~v~A~~n---------~CpH~G~~L~~g 113 (175)
T 4aay_B 92 PDGDIVGFST---------ICPHKGFPLSYS 113 (175)
T ss_dssp TTTCEEEEEC---------BCTTTCCBCEEE
T ss_pred CCCEEEEEeC---------CCCCCCCCCccC
Confidence 3688888876 899999998754
No 64
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=26.91 E-value=31 Score=27.71 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=23.1
Q ss_pred ccccccccCCCCCCCCCCCcceEEEEEeecccc--CCccccCCC
Q 028194 101 KYDSHYDAFNPAEYGPQMSQRLASFLLYLSDVE--EGGETMFPF 142 (212)
Q Consensus 101 ~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~--~GGeT~Fp~ 142 (212)
...||+|..... ..-.+++|.-+.-+. .||+|.|-+
T Consensus 108 ~~~wHtD~sy~~------~pp~~~~L~c~~~p~~~~GG~T~~~d 145 (293)
T 3eat_X 108 YVPLHWDGMYLE------TVPEFQVFHCVDAPGDSDGGRTTFSS 145 (293)
T ss_dssp CEEEECTTTTSS------EEEEEEEEEEEECCSCCSBCCEEEEE
T ss_pred CccceECCCCcC------CCCceEEEEeEeCCCCCCCCceEEee
Confidence 345899987532 223456665555554 799999854
No 65
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=25.45 E-value=65 Score=26.38 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=32.9
Q ss_pred cceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccceEEEEEeccccccc
Q 028194 158 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGEKWVATKWIRDQEQ 209 (212)
Q Consensus 158 ~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G~K~~~~~W~~~~~~ 209 (212)
..+.+.-++|++|+.+. ..+|.+..+ +.-.+++.|++..+.
T Consensus 238 ~~~~~~L~pGD~LyiP~---------gWwH~v~~l--~~sisvn~~~~~~~~ 278 (338)
T 3al5_A 238 RRYECSLEAGDVLFIPA---------LWFHNVISE--EFGVGVNIFWKHLPS 278 (338)
T ss_dssp CEEEEEECTTCEEEECT---------TCEEEEEES--SCEEEEEEEECSSCG
T ss_pred CCEEEEECCCCEEEECC---------CCeEEEeeC--CCEEEEEEEecCCcc
Confidence 45778888999999985 789999987 456788999887553
No 66
>3gkq_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske nonheme iron oxygenase, electron transfer, putidaredoxin-type ferredoxin; 2.10A {Sphingomonas}
Probab=25.22 E-value=84 Score=26.58 Aligned_cols=55 Identities=11% Similarity=-0.035 Sum_probs=37.9
Q ss_pred cceEEEEEeeccccCCccccCCCCCCcccCCCCCcccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccce
Q 028194 120 QRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKGE 196 (212)
Q Consensus 120 ~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G~ 196 (212)
.+.+..+..+.++.+|+-..+...+. .-+-++ ..|.+..|.| .+.|.|+|+..|.
T Consensus 29 ~~~W~~V~~~~ELp~G~~~~v~i~G~------------~VvV~R-~dG~v~A~~N---------~CpHRGa~Ls~G~ 83 (389)
T 3gkq_A 29 RNHWYPVRLSAEVAEASPVPVQLLGE------------KVLLNR-VDGVVHAIAD---------RCLHRGVTLSDKV 83 (389)
T ss_dssp SSEEEEEEEGGGSCBTCCEEEEETTE------------EEEEEE-ETTEEEEEES---------SCTTTCCCGGGGC
T ss_pred cCccEEEEEHHHCCCCCeEEEEECCE------------EEEEEE-eCCeEEEeCC---------cCCCCCCCccCCc
Confidence 45677777888887766554433211 124455 7899999987 8999999998763
No 67
>3gcf_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske oxygenase, 2Fe-2S, electron transfer, oxidoreductase; 2.30A {Nocardioides aromaticivorans}
Probab=23.94 E-value=83 Score=26.66 Aligned_cols=54 Identities=13% Similarity=0.082 Sum_probs=37.5
Q ss_pred cceEEEEEeeccccCCccccCCCCCCcccCCCCCcccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc
Q 028194 120 QRLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 195 (212)
Q Consensus 120 ~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G 195 (212)
.+.+..+..+.++.+|+-..+...+. .-+-++ ..|.+..|.| .+.|.|+|+..|
T Consensus 32 ~~~W~~V~~~~ELp~G~~~~v~i~G~------------~VvV~R-~dG~v~A~~N---------~CpHRGa~Ls~G 85 (394)
T 3gcf_A 32 DNHWHPAAFDHELAEGEFVAVTMLGE------------KVLLTR-AKGEVKAIAD---------GCAHRGVPFSKE 85 (394)
T ss_dssp ESEEEEEEEGGGCCBTCEEEEEETTE------------EEEEEE-ETTEEEEEES---------SCTTTCCCGGGS
T ss_pred cccCEEEEEHHHCCCCCeEEEEECCE------------EEEEEE-eCCeEEEeeC---------cCCCCCCCCcCC
Confidence 45677777888887766555443211 124455 7899888887 899999999876
No 68
>2zyl_A Possible oxidoreductase; KSHA, cholesterol, rieske; 2.30A {Mycobacterium tuberculosis}
Probab=22.35 E-value=98 Score=25.84 Aligned_cols=54 Identities=17% Similarity=-0.031 Sum_probs=36.5
Q ss_pred ceEEEEEeeccccCCccccCCCCCCcccCCCCCcccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc
Q 028194 121 RLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 195 (212)
Q Consensus 121 R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G 195 (212)
|-+..+....++.+|.-..+...+. .-+-++-..|.+..|.| .+.|.|+|+..|
T Consensus 24 ~~W~~v~~~~el~~g~~~~~~~~g~------------~vvl~R~~~G~v~a~~n---------~CpHrga~L~~g 77 (386)
T 2zyl_A 24 RGWHCLGVAKDYLEGKPHGVEAFGT------------KLVVFADSHGDLKVLDG---------YCRHMGGDLSEG 77 (386)
T ss_dssp SEEEEEEEGGGGCSSSCEEEEETTE------------EEEEEECTTSCEEEEES---------BCTTTCCBGGGS
T ss_pred cceEEEEEHHHCCCCCeEEEEECCe------------EEEEEECCCCCEEEEcC---------cCCCCCCCCCCC
Confidence 4567777788877655444432210 22445667888888877 899999998766
No 69
>3gke_A DDMC; rieske cluster, non-heme mononuclear iron, oxygenase, oxidoreductase; 1.75A {Stenotrophomonas maltophilia} PDB: 3gb4_A 3gl0_A* 3gl2_A* 3gob_A* 3gte_A 3gts_A*
Probab=21.62 E-value=72 Score=26.21 Aligned_cols=53 Identities=8% Similarity=-0.073 Sum_probs=34.1
Q ss_pred ceEEEEEeeccccCCccccCCCCCCcccCCCCCcccccceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc
Q 028194 121 RLASFLLYLSDVEEGGETMFPFENGIFLDSGYDYKKCIGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG 195 (212)
Q Consensus 121 R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G 195 (212)
+.+-.+....++ .|.-..+...+. .-+-++-..|.+..|.| .+.|.|+|+..|
T Consensus 7 ~~W~~v~~~~el-~g~~~~~~~~g~------------~vvv~R~~~G~v~a~~n---------~CpHrg~~L~~G 59 (349)
T 3gke_A 7 NAWYVAALPEEL-SEKPLGRTILDT------------PLALYRQPDGVVAALLD---------ICPHRFAPLSDG 59 (349)
T ss_dssp SSCEEEECGGGC-CSSCEEEEETTE------------EEEEEECTTSCEEEEES---------SCTTTCCCGGGC
T ss_pred cccEEEEEHHHC-CCCeEEEEECCE------------EEEEEEcCCCcEEEEeC---------cCCCCCcCCccC
Confidence 345556666677 554433332110 23455667889988987 899999999876
No 70
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=20.59 E-value=80 Score=25.00 Aligned_cols=41 Identities=10% Similarity=0.088 Sum_probs=30.2
Q ss_pred cceEEeeccCCEEEEeeeCCCCCcCCCCcccccCCccc-eEEEEEecccc
Q 028194 158 IGLKVKPRRGDGLLFYSLFPNGTIDRTSLHGSCPVIKG-EKWVATKWIRD 206 (212)
Q Consensus 158 ~~~~v~P~~G~av~f~n~~~~g~~d~~~~H~~~pV~~G-~K~~~~~W~~~ 206 (212)
..++.+=++|+++||.| ..++|.+.+-..+ .|..-+.++..
T Consensus 232 ~~~r~~W~~GDlviwDN--------r~~lH~a~~d~~~~~R~~~R~ti~g 273 (277)
T 3pvj_A 232 FSIRWRWQENDVAFWDN--------RVTQHFAVDDYRPNRRVMHRATILG 273 (277)
T ss_dssp GEEEECCCTTCEEEEET--------TSEEEEECCCCTTSCCEEEEEEECC
T ss_pred cEEEEeeCCCCEEEEeC--------CceeeeccCCCCCCccEEEEEEecC
Confidence 35777788999999998 6899999876543 45555665543
No 71
>1nkz_B Light-harvesting protein B-800/850, beta chain; light harvesting complex II, trans-membrane helices, rhodopi glucoside; HET: CXM RG1 BOG BCL; 2.00A {Rhodoblastus acidophilus} SCOP: f.3.1.1 PDB: 1kzu_B* 2fkw_B* 1ijd_B*
Probab=20.48 E-value=49 Score=18.50 Aligned_cols=15 Identities=20% Similarity=0.116 Sum_probs=11.5
Q ss_pred CCCHHHHHHHHHHhc
Q 028194 16 FASAEQCQSIIATAK 30 (212)
Q Consensus 16 fLs~~ec~~li~~~~ 30 (212)
-||++|++++=+...
T Consensus 2 gLT~~EA~EfH~~~~ 16 (41)
T 1nkz_B 2 TLTAEQSEELHKYVI 16 (41)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 389999998876653
Done!