Query 028200
Match_columns 212
No_of_seqs 231 out of 1973
Neff 7.6
Searched_HMMs 13730
Date Mon Mar 25 12:35:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028200.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/028200hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1iyma_ g.44.1.1 (A:) EL5 RING 99.8 1.2E-19 8.4E-24 116.8 4.3 52 155-206 3-55 (55)
2 d1chca_ g.44.1.1 (A:) Immediat 99.6 7.9E-17 5.8E-21 107.7 3.9 47 157-205 5-51 (68)
3 d3dplr1 g.44.1.1 (R:19-106) RI 99.6 2.5E-16 1.8E-20 110.4 4.7 52 156-207 20-86 (88)
4 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.6 6E-16 4.4E-20 102.4 5.0 53 156-208 2-57 (65)
5 d1fbva4 g.44.1.1 (A:356-434) C 99.6 1.1E-15 8.3E-20 104.9 5.9 51 157-210 23-74 (79)
6 d1ur6b_ g.44.1.1 (B:) Not-4 N- 99.5 7.4E-16 5.4E-20 97.6 2.5 48 159-206 2-51 (52)
7 d1v87a_ g.44.1.1 (A:) Deltex p 99.5 3.4E-15 2.5E-19 109.1 5.2 51 157-207 25-95 (114)
8 d2baya1 g.44.1.2 (A:1-56) Pre- 99.5 2.5E-15 1.9E-19 96.5 2.3 50 159-210 2-51 (56)
9 d1vyxa_ g.44.1.3 (A:) IE1B pro 99.4 5.4E-14 4E-18 91.3 3.8 53 154-206 3-59 (60)
10 d1rmda2 g.44.1.1 (A:1-86) V(D) 99.4 6.5E-14 4.7E-18 97.4 3.5 49 156-207 22-71 (86)
11 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.4 8.1E-14 5.9E-18 100.0 2.8 51 155-208 19-72 (103)
12 d1bora_ g.44.1.1 (A:) Acute pr 99.3 7.1E-14 5.2E-18 89.5 0.9 48 156-209 5-52 (56)
13 d1jm7b_ g.44.1.1 (B:) bard1 RI 99.2 6.2E-13 4.5E-17 94.2 1.2 50 155-208 20-69 (97)
14 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 99.2 5.1E-12 3.7E-16 85.9 4.7 51 155-208 6-57 (78)
15 d2c2la2 g.44.1.2 (A:225-304) S 99.2 3.7E-12 2.7E-16 87.0 3.6 50 156-208 6-56 (80)
16 d1wgma_ g.44.1.2 (A:) Ubiquiti 99.0 1E-10 7.6E-15 82.8 4.6 51 156-209 21-72 (98)
17 d1wima_ g.44.1.1 (A:) UbcM4-in 98.8 1.2E-09 8.7E-14 76.2 2.5 45 157-201 5-57 (94)
18 d1f62a_ g.50.1.2 (A:) Williams 95.5 0.0031 2.3E-07 37.7 2.1 44 159-202 2-49 (51)
19 d1mm2a_ g.50.1.2 (A:) Mi2-beta 92.8 0.0082 6E-07 37.2 -0.2 48 154-204 6-57 (61)
20 d1wila_ g.50.1.3 (A:) Hypothet 92.7 0.032 2.3E-06 36.6 2.6 35 155-190 13-47 (89)
21 d1fp0a1 g.50.1.2 (A:19-88) Nuc 92.7 0.021 1.6E-06 36.2 1.7 48 155-205 5-56 (70)
22 d1we9a_ g.50.1.2 (A:) PHD fing 88.8 0.091 6.6E-06 32.3 1.9 48 156-203 5-58 (64)
23 d2cs3a1 g.44.1.3 (A:8-87) Prot 87.7 0.46 3.4E-05 29.9 4.7 37 157-193 8-45 (80)
24 d1wema_ g.50.1.2 (A:) Death as 86.9 0.26 1.9E-05 31.0 3.4 46 156-202 15-69 (76)
25 d1z60a1 g.49.1.2 (A:328-386) T 86.0 0.086 6.2E-06 32.2 0.5 45 156-200 14-58 (59)
26 d1wewa_ g.50.1.2 (A:) Sumoylat 84.7 0.29 2.1E-05 31.2 2.7 47 156-204 15-73 (78)
27 d1wepa_ g.50.1.2 (A:) PHD fing 75.7 1.9 0.00014 27.2 4.3 46 158-203 12-63 (79)
28 d1weoa_ g.44.1.1 (A:) Cellulos 72.6 2.3 0.00017 27.5 4.1 50 156-205 15-69 (93)
29 d1y02a2 g.50.1.1 (A:20-70) Rif 71.9 0.15 1.1E-05 30.2 -1.9 44 159-202 2-46 (51)
30 d1wesa_ g.50.1.2 (A:) PHD Inhi 71.2 0.5 3.6E-05 29.7 0.5 40 160-203 18-65 (71)
31 d1weva_ g.50.1.2 (A:) PHD fing 70.9 0.48 3.5E-05 30.7 0.4 48 156-203 15-72 (88)
32 d1zbdb_ g.50.1.1 (B:) Effector 68.4 1 7.4E-05 31.1 1.7 51 154-204 45-101 (124)
33 d1joca1 g.50.1.1 (A:1348-1411) 64.9 2.4 0.00018 25.6 2.9 37 155-191 6-43 (64)
34 d2gmga1 a.4.5.82 (A:1-105) Hyp 64.7 0.63 4.6E-05 31.5 -0.0 31 173-208 68-98 (105)
35 d1dvpa2 g.50.1.1 (A:149-220) H 62.0 2.8 0.0002 26.0 2.8 35 156-190 12-47 (72)
36 d1rutx3 g.39.1.3 (X:83-113) LI 57.8 2 0.00015 22.4 1.2 27 159-186 4-30 (31)
37 d2o35a1 a.293.1.1 (A:2-80) Hyp 57.7 2.1 0.00015 27.1 1.5 11 182-192 40-50 (79)
38 d2akla2 g.41.3.5 (A:3-40) Hypo 54.7 3 0.00022 22.7 1.7 24 159-182 5-30 (38)
39 d2co8a2 g.39.1.3 (A:8-43) Nedd 54.0 1.6 0.00012 23.6 0.4 28 156-186 7-35 (36)
40 d1vfya_ g.50.1.1 (A:) vps27p p 53.9 4.1 0.0003 24.7 2.5 35 157-191 5-40 (67)
41 d1weea_ g.50.1.2 (A:) PHD fing 51.5 2 0.00015 26.4 0.7 44 159-203 18-66 (72)
42 d2apob1 g.41.16.1 (B:403-457) 43.8 6.6 0.00048 23.1 2.1 20 193-212 15-34 (55)
43 d2d8ya1 g.39.1.3 (A:9-43) Epli 42.8 5 0.00036 21.4 1.3 27 157-186 7-34 (35)
44 d2d8va1 g.43.1.1 (A:8-61) Zinc 42.6 6 0.00044 23.1 1.8 26 160-189 4-30 (54)
45 d1lkoa2 g.41.5.1 (A:148-191) R 42.1 3.8 0.00028 23.0 0.8 25 173-203 9-33 (44)
46 d2ey4e1 g.41.16.1 (E:4-55) Rib 40.3 5.7 0.00041 23.1 1.4 20 193-212 13-32 (52)
47 d2dloa1 g.39.1.3 (A:8-42) Thyr 36.5 4.2 0.0003 21.7 0.3 27 157-186 8-34 (35)
48 d1v6ga1 g.39.1.3 (A:1-41) Acti 35.7 4.6 0.00034 22.3 0.4 28 156-186 14-41 (41)
49 d2ct7a1 g.44.1.4 (A:8-80) Ring 35.1 2.6 0.00019 26.1 -0.8 36 158-193 19-57 (73)
50 d1lv3a_ g.39.1.9 (A:) Hypothet 35.0 6.3 0.00046 24.0 1.1 12 196-207 8-19 (65)
51 d1wfka_ g.50.1.1 (A:) Zinc fin 32.2 14 0.001 23.4 2.6 47 156-202 8-62 (88)
52 d2epqa1 g.37.1.1 (A:380-411) P 32.0 7 0.00051 19.8 0.8 11 158-168 4-14 (32)
53 d2jnea1 g.41.18.1 (A:1-71) Hyp 31.9 8.2 0.00059 23.8 1.2 38 158-204 3-41 (71)
54 d2dlqa3 g.37.1.1 (A:63-92) GLI 31.8 6.2 0.00045 19.7 0.5 15 155-169 2-16 (30)
55 d2pk7a1 b.171.1.1 (A:3-61) Unc 29.9 7 0.00051 23.2 0.6 13 196-208 8-20 (59)
56 d1b8ta3 g.39.1.3 (A:101-143) C 28.2 10 0.00075 21.0 1.1 29 156-186 14-42 (43)
57 d1b8ta1 g.39.1.3 (A:1-35) Cyst 27.8 8.4 0.00061 20.0 0.6 28 156-186 6-34 (35)
58 d2cu8a1 g.39.1.3 (A:8-37) Cyst 27.2 15 0.0011 18.7 1.5 15 194-208 2-16 (30)
59 d2drpa2 g.37.1.1 (A:140-165) T 27.0 7.9 0.00058 18.5 0.4 10 160-169 4-13 (26)
60 d1x6aa1 g.39.1.3 (A:8-41) Lim 25.3 12 0.00087 19.5 1.0 27 157-186 8-34 (34)
61 d2jnya1 b.171.1.1 (A:1-59) Unc 24.2 17 0.0013 21.3 1.7 27 156-182 9-38 (59)
62 d2pnxa1 g.50.1.2 (A:195-245) I 23.2 9.7 0.0007 21.5 0.3 39 159-202 4-50 (51)
63 d2gyc11 g.41.8.6 (1:1-52) Ribo 23.0 15 0.0011 21.2 1.1 15 194-208 36-50 (52)
64 d1x3ha1 g.39.1.3 (A:8-42) Leup 22.7 10 0.00076 19.9 0.4 27 157-186 8-34 (35)
65 d1x3ha2 g.39.1.3 (A:43-74) Leu 22.7 12 0.00088 19.4 0.6 26 159-184 1-29 (32)
66 d2dlqa4 g.37.1.1 (A:8-34) GLI- 22.3 15 0.0011 17.7 0.9 10 196-205 2-11 (27)
67 d2j9ub1 g.41.11.1 (B:115-161) 22.1 10 0.00075 21.2 0.3 9 158-166 4-12 (47)
No 1
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.76 E-value=1.2e-19 Score=116.82 Aligned_cols=52 Identities=27% Similarity=0.781 Sum_probs=45.4
Q ss_pred cCCCccccccccccCCCCeEEc-CCCCcccHHHHHHHHhcCCCCCcccccccC
Q 028200 155 EEEDVCPTCLEEYDAENPRIIT-KCEHHFHLACIFEWMERSDTCPVCNQEMIF 206 (212)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l-~C~H~FH~~CI~~Wl~~~~tCPvCr~~l~~ 206 (212)
+++..|+|||++|..++.++.+ .|+|.||..||.+||+++++||+||+.|++
T Consensus 3 ed~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~i~v 55 (55)
T d1iyma_ 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVVV 55 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSCC
T ss_pred CCCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHHhCCcCCCCCCEeEC
Confidence 4566799999999887766655 699999999999999999999999998863
No 2
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.62 E-value=7.9e-17 Score=107.68 Aligned_cols=47 Identities=34% Similarity=0.875 Sum_probs=41.7
Q ss_pred CCccccccccccCCCCeEEcCCCCcccHHHHHHHHhcCCCCCccccccc
Q 028200 157 EDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQEMI 205 (212)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~l~ 205 (212)
.+.|+||++.|. ++.+.++|||.||..||.+||+++.+||+||+++.
T Consensus 5 ~d~C~IC~~~~~--~~~~~~~C~H~Fc~~Ci~~w~~~~~~CP~CR~~i~ 51 (68)
T d1chca_ 5 AERCPICLEDPS--NYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCC--SCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCccCCcCcc--CCcEEeCCCCcCcHHHHHHHHHhCCcCCCCCcchH
Confidence 456999999985 35678999999999999999999999999999873
No 3
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=2.5e-16 Score=110.43 Aligned_cols=52 Identities=29% Similarity=0.635 Sum_probs=44.2
Q ss_pred CCCccccccccccCCC---------------CeEEcCCCCcccHHHHHHHHhcCCCCCcccccccCC
Q 028200 156 EEDVCPTCLEEYDAEN---------------PRIITKCEHHFHLACIFEWMERSDTCPVCNQEMIFD 207 (212)
Q Consensus 156 e~~~C~ICle~~~~~~---------------~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~l~~~ 207 (212)
.++.|+||++.+.... .+..++|||.||..||.+||+.+++||+||+++.++
T Consensus 20 ~~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~~ 86 (88)
T d3dplr1 20 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQ 86 (88)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCCEE
T ss_pred CCCcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHHHCCcCCCCCCccccc
Confidence 4556999999885422 467789999999999999999999999999998765
No 4
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=6e-16 Score=102.42 Aligned_cols=53 Identities=19% Similarity=0.483 Sum_probs=42.0
Q ss_pred CCCcccccccccc--CCCCeEEcCCCCcccHHHHHHHHhc-CCCCCcccccccCCC
Q 028200 156 EEDVCPTCLEEYD--AENPRIITKCEHHFHLACIFEWMER-SDTCPVCNQEMIFDL 208 (212)
Q Consensus 156 e~~~C~ICle~~~--~~~~~~~l~C~H~FH~~CI~~Wl~~-~~tCPvCr~~l~~~~ 208 (212)
++.+|+||++.+. ......+++|||.||..||.+|+++ +.+||+||+.+..++
T Consensus 2 dd~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~~~~ 57 (65)
T d1g25a_ 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSN 57 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCC
T ss_pred CCCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcCcCCCCCCCcCccccc
Confidence 4567999999863 2344567899999999999999965 568999999885543
No 5
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=1.1e-15 Score=104.88 Aligned_cols=51 Identities=27% Similarity=0.656 Sum_probs=43.3
Q ss_pred CCccccccccccCCCCeEEcCCCCcccHHHHHHHHh-cCCCCCcccccccCCCCC
Q 028200 157 EDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWME-RSDTCPVCNQEMIFDLPV 210 (212)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~-~~~tCPvCr~~l~~~~~~ 210 (212)
...|+||++.+.. .++++|||.||..||.+||+ ++++||+||+.|.....+
T Consensus 23 ~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~~~~i 74 (79)
T d1fbva4 23 FQLCKICAENDKD---VKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTEPI 74 (79)
T ss_dssp TTBCTTTSSSBCC---EECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCCCCCCS
T ss_pred CCCCccCCCcCCC---eEEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCccCCcee
Confidence 4569999998864 67899999999999999997 457899999999765544
No 6
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=7.4e-16 Score=97.55 Aligned_cols=48 Identities=19% Similarity=0.470 Sum_probs=39.9
Q ss_pred ccccccccccCCCC-eEEcCCCCcccHHHHHHHHhcC-CCCCcccccccC
Q 028200 159 VCPTCLEEYDAENP-RIITKCEHHFHLACIFEWMERS-DTCPVCNQEMIF 206 (212)
Q Consensus 159 ~C~ICle~~~~~~~-~~~l~C~H~FH~~CI~~Wl~~~-~tCPvCr~~l~~ 206 (212)
.|+|||++|..++. ...++|||.||..||.+|++.. .+||+||+.+..
T Consensus 2 eCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~~~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 2 ECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE 51 (52)
T ss_dssp EETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTSCCBCTTTCCBCSC
T ss_pred CCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhcCCCCCccCCcCCC
Confidence 49999999976544 4456899999999999999864 579999998753
No 7
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.52 E-value=3.4e-15 Score=109.06 Aligned_cols=51 Identities=29% Similarity=0.594 Sum_probs=40.7
Q ss_pred CCccccccccccC---------------CCCeEEcCCCCcccHHHHHHHHhcC-----CCCCcccccccCC
Q 028200 157 EDVCPTCLEEYDA---------------ENPRIITKCEHHFHLACIFEWMERS-----DTCPVCNQEMIFD 207 (212)
Q Consensus 157 ~~~C~ICle~~~~---------------~~~~~~l~C~H~FH~~CI~~Wl~~~-----~tCPvCr~~l~~~ 207 (212)
++.|+||++.+.. ...+.+++|+|.||..||.+||+++ .+||+||+.+-.+
T Consensus 25 ~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T d1v87a_ 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred cccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhccC
Confidence 4469999998743 2346678999999999999999864 4899999877544
No 8
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.50 E-value=2.5e-15 Score=96.46 Aligned_cols=50 Identities=14% Similarity=0.280 Sum_probs=43.6
Q ss_pred ccccccccccCCCCeEEcCCCCcccHHHHHHHHhcCCCCCcccccccCCCCC
Q 028200 159 VCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQEMIFDLPV 210 (212)
Q Consensus 159 ~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~l~~~~~~ 210 (212)
.|+||++.+. ++++...|||.||..||.+||+++++||+||+.+..++.+
T Consensus 2 ~C~Ic~~~~~--~Pv~~~~cGh~fc~~cI~~~l~~~~~CP~c~~~l~~~dLi 51 (56)
T d2baya1 2 LCAISGKVPR--RPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIV 51 (56)
T ss_dssp CCTTTCSCCS--SEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGCE
T ss_pred CCccCCchHH--hcCccCCCCCcccHHHHHHHHhhccCCCccCCcCCHHhce
Confidence 6999999885 4566667999999999999999999999999999877654
No 9
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=99.41 E-value=5.4e-14 Score=91.27 Aligned_cols=53 Identities=25% Similarity=0.406 Sum_probs=40.0
Q ss_pred ccCCCccccccccccCCCC--eEEcCCCCcccHHHHHHHHhc--CCCCCcccccccC
Q 028200 154 IEEEDVCPTCLEEYDAENP--RIITKCEHHFHLACIFEWMER--SDTCPVCNQEMIF 206 (212)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~--~~~l~C~H~FH~~CI~~Wl~~--~~tCPvCr~~l~~ 206 (212)
+++..+|+||++++..... .....|+|.||..||.+|++. +.+||+||+++.+
T Consensus 3 ded~~~C~IC~~~~~~~~~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~~~~ 59 (60)
T d1vyxa_ 3 DEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp TCSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCCCCCccCCccCCCceeEecccCCCCCEEcHHHHHHHHhhCCCCCCcccCCeeec
Confidence 4667789999998864321 122335699999999999954 5689999998765
No 10
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.39 E-value=6.5e-14 Score=97.38 Aligned_cols=49 Identities=22% Similarity=0.510 Sum_probs=41.0
Q ss_pred CCCccccccccccCCCCeEEcCCCCcccHHHHHHHHhcC-CCCCcccccccCC
Q 028200 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS-DTCPVCNQEMIFD 207 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~-~tCPvCr~~l~~~ 207 (212)
++..|+||++.|.. .++++|||.||..||.+|++.. .+||+||..+...
T Consensus 22 ~~l~C~IC~~~~~~---pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~~~ 71 (86)
T d1rmda2 22 KSISCQICEHILAD---PVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPT 71 (86)
T ss_dssp HHTBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGG
T ss_pred cCcCCccCCcchhc---ceecCCCChhhHHHHHHHHhhCCCcCcccCCCCChh
Confidence 34579999999865 6788999999999999999754 5899999987543
No 11
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=8.1e-14 Score=99.96 Aligned_cols=51 Identities=27% Similarity=0.715 Sum_probs=41.3
Q ss_pred cCCCccccccccccCCCCeEEcCCCCcccHHHHHHHHhcCC---CCCcccccccCCC
Q 028200 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSD---TCPVCNQEMIFDL 208 (212)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~---tCPvCr~~l~~~~ 208 (212)
++...|+||++.|.. .+.++|||.||..||.+|+++.+ +||+||+.+...+
T Consensus 19 ~~~l~CpIC~~~~~~---pv~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 72 (103)
T d1jm7a_ 19 QKILECPICLELIKE---PVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72 (103)
T ss_dssp HHHTSCSSSCCCCSS---CCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTT
T ss_pred ccCcCCCccCchhCC---eEEcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCChhh
Confidence 345569999999864 45689999999999999997753 7999999885443
No 12
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=7.1e-14 Score=89.53 Aligned_cols=48 Identities=19% Similarity=0.429 Sum_probs=40.0
Q ss_pred CCCccccccccccCCCCeEEcCCCCcccHHHHHHHHhcCCCCCcccccccCCCC
Q 028200 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQEMIFDLP 209 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~l~~~~~ 209 (212)
+...|+||++.|.. .++++|||.||..||.+| +.+||+||+.+.....
T Consensus 5 ~~l~C~IC~~~~~~---p~~lpCgH~fC~~Ci~~~---~~~CP~Cr~~~~~~~~ 52 (56)
T d1bora_ 5 QFLRCQQCQAEAKC---PKLLPCLHTLCSGCLEAS---GMQCPICQAPWPLGAD 52 (56)
T ss_dssp CCSSCSSSCSSCBC---CSCSTTSCCSBTTTCSSS---SSSCSSCCSSSSCCSS
T ss_pred CCCCCcccCcccCC---CEEecCCCHHhHHHHHcC---CCcCcCCCCcccCCCC
Confidence 34589999999865 457899999999999877 6789999999976654
No 13
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=6.2e-13 Score=94.23 Aligned_cols=50 Identities=26% Similarity=0.565 Sum_probs=40.3
Q ss_pred cCCCccccccccccCCCCeEEcCCCCcccHHHHHHHHhcCCCCCcccccccCCC
Q 028200 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVCNQEMIFDL 208 (212)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~l~~~~ 208 (212)
++...|+||++.|.. ++.+++|||.||..||.+|+. .+||+||+.+...+
T Consensus 20 ~~~l~C~IC~~~~~~--pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~ 69 (97)
T d1jm7b_ 20 EKLLRCSRCTNILRE--PVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQD 69 (97)
T ss_dssp HHTTSCSSSCSCCSS--CBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCSS
T ss_pred hhcCCCccCCchhhc--CceeCCCCCchhHHHHHHHHh--ccccccCCcCchhh
Confidence 345679999999954 555678999999999999985 45999999876544
No 14
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.21 E-value=5.1e-12 Score=85.86 Aligned_cols=51 Identities=22% Similarity=0.481 Sum_probs=43.1
Q ss_pred cCCCccccccccccCCCCeEEcCCCCcccHHHHHHHHhcC-CCCCcccccccCCC
Q 028200 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS-DTCPVCNQEMIFDL 208 (212)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~-~tCPvCr~~l~~~~ 208 (212)
.++..|+||++.|.. .++++|||.|+..||.+|++.+ .+||+|+..+..++
T Consensus 6 P~~l~CpIc~~~m~d---PV~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l~~~~ 57 (78)
T d1t1ha_ 6 PEYFRCPISLELMKD---PVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAG 57 (78)
T ss_dssp SSSSSCTTTSCCCSS---EEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCC
T ss_pred CccCCCcCcCchhhC---ceEccCCCcchHHHHHHHHHHCCCCCCcccccCCccc
Confidence 357789999999965 5678999999999999999875 57999999886554
No 15
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.20 E-value=3.7e-12 Score=87.04 Aligned_cols=50 Identities=16% Similarity=0.107 Sum_probs=42.5
Q ss_pred CCCccccccccccCCCCeEEcCCCCcccHHHHHHHHhc-CCCCCcccccccCCC
Q 028200 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMER-SDTCPVCNQEMIFDL 208 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~-~~tCPvCr~~l~~~~ 208 (212)
++..|+||++.|.. .++++|||.|+..||.+|+.+ +.+||+||+.+..++
T Consensus 6 ~~l~CpIc~~l~~d---Pv~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~~~ 56 (80)
T d2c2la2 6 DYLCGKISFELMRE---PCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQ 56 (80)
T ss_dssp STTBCTTTCSBCSS---EEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGG
T ss_pred ccccCcCcCchhhh---hcccCCcCeecHHHHHHHHhcCCccCCCccccccccc
Confidence 56789999999966 568999999999999999975 457999999876543
No 16
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.01 E-value=1e-10 Score=82.77 Aligned_cols=51 Identities=12% Similarity=0.068 Sum_probs=43.2
Q ss_pred CCCccccccccccCCCCeEEcCCC-CcccHHHHHHHHhcCCCCCcccccccCCCC
Q 028200 156 EEDVCPTCLEEYDAENPRIITKCE-HHFHLACIFEWMERSDTCPVCNQEMIFDLP 209 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~-H~FH~~CI~~Wl~~~~tCPvCr~~l~~~~~ 209 (212)
++..||||++.|.. .++++|+ |.|+..||.+||+++.+||+||+.+..++.
T Consensus 21 ~~f~CPI~~~lm~d---PV~~~~~~~ty~r~~I~~~l~~~~~~P~~~~~l~~~~L 72 (98)
T d1wgma_ 21 DEFLDPIMSTLMCD---PVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQI 72 (98)
T ss_dssp TTTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTS
T ss_pred HHhCCcCchhHHHH---HHhcccccchhhHHHHHHHHHhcCCcccccccccchhh
Confidence 46789999999976 6677765 579999999999999999999999876553
No 17
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.76 E-value=1.2e-09 Score=76.22 Aligned_cols=45 Identities=29% Similarity=0.626 Sum_probs=37.2
Q ss_pred CCccccccccccCCCCeEEcCCCCcccHHHHHHHHhcC--------CCCCccc
Q 028200 157 EDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS--------DTCPVCN 201 (212)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~--------~tCPvCr 201 (212)
...|+||++++..++...+++|+|.||..||..|++.+ -+||.|+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~ 57 (94)
T d1wima_ 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAA 57 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTT
T ss_pred CCcCccCCCcccCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCC
Confidence 45699999999777767778999999999999999642 2699854
No 18
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.48 E-value=0.0031 Score=37.72 Aligned_cols=44 Identities=23% Similarity=0.607 Sum_probs=32.8
Q ss_pred ccccccccccCCCCeEEcCCCCcccHHHHHHHHhcC----CCCCcccc
Q 028200 159 VCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQ 202 (212)
Q Consensus 159 ~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~ 202 (212)
.|.||...-..++-+..-.|...||..|+..-+... =.||.|+.
T Consensus 2 ~C~vC~~~~~~~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~ 49 (51)
T d1f62a_ 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCcCcCCCCCCCCEEEcCCCCCCCCCCCCCCCCCcCCCCCEECcCCcC
Confidence 488998765555555556799999999999877543 25999975
No 19
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.85 E-value=0.0082 Score=37.21 Aligned_cols=48 Identities=17% Similarity=0.444 Sum_probs=34.4
Q ss_pred ccCCCccccccccccCCCCeEEcCCCCcccHHHHHHHHhcC----CCCCcccccc
Q 028200 154 IEEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQEM 204 (212)
Q Consensus 154 ~ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~~l 204 (212)
++.++.|.||.+ .++-+..-.|.-.||..||...+... =.||.|+...
T Consensus 6 d~~~~~C~~C~~---~g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~~ 57 (61)
T d1mm2a_ 6 DHHMEFCRVCKD---GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp CSSCSSCTTTCC---CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred cCCcCCCcCCCC---CCeEEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcCcc
Confidence 345667999986 34545556789999999998766442 3699997644
No 20
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.71 E-value=0.032 Score=36.55 Aligned_cols=35 Identities=26% Similarity=0.571 Sum_probs=25.4
Q ss_pred cCCCccccccccccCCCCeEEcCCCCcccHHHHHHH
Q 028200 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEW 190 (212)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~W 190 (212)
..+..|.|| +.|..+...-.=-|+.+||..|+.+-
T Consensus 13 ~~D~mC~vC-~v~t~~~l~pCRvCtRv~H~~CL~r~ 47 (89)
T d1wila_ 13 VNDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHH
T ss_pred CcCcccccc-CcccccceecceeecchhhHHHHHHh
Confidence 346679999 88876543222237999999999985
No 21
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.71 E-value=0.021 Score=36.23 Aligned_cols=48 Identities=21% Similarity=0.567 Sum_probs=34.3
Q ss_pred cCCCccccccccccCCCCeEEcCCCCcccHHHHHHHHhcC----CCCCccccccc
Q 028200 155 EEEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERS----DTCPVCNQEMI 205 (212)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~----~tCPvCr~~l~ 205 (212)
+...+|.||.. .++.+..-.|...||..|+...+... =.||.|+....
T Consensus 5 d~c~~C~~C~~---~~~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 56 (70)
T d1fp0a1 5 DSATICRVCQK---PGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 56 (70)
T ss_dssp SSSSCCSSSCS---SSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCS
T ss_pred CCCCCCCCCCC---cCEEEECCCCChhhccccCCCCcCcCCCCCEECcCCcCcCc
Confidence 34456777765 45556666799999999999887553 25999976543
No 22
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=88.77 E-value=0.091 Score=32.35 Aligned_cols=48 Identities=31% Similarity=0.621 Sum_probs=33.5
Q ss_pred CCCccccccccccCCCCeE-EcCCCCcccHHHHHHHH---h--cCCCCCccccc
Q 028200 156 EEDVCPTCLEEYDAENPRI-ITKCEHHFHLACIFEWM---E--RSDTCPVCNQE 203 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~~~-~l~C~H~FH~~CI~~Wl---~--~~~tCPvCr~~ 203 (212)
....|.||...+..++..+ .-.|+..||..|+..=. . ..-.||.|+..
T Consensus 5 ~~~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~ 58 (64)
T d1we9a_ 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCcCcCcCCCCCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCc
Confidence 3456999999886665544 56799999999986321 1 12369999753
No 23
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.67 E-value=0.46 Score=29.91 Aligned_cols=37 Identities=19% Similarity=0.331 Sum_probs=28.2
Q ss_pred CCccccccccccCCCCeEEcC-CCCcccHHHHHHHHhc
Q 028200 157 EDVCPTCLEEYDAENPRIITK-CEHHFHLACIFEWMER 193 (212)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l~-C~H~FH~~CI~~Wl~~ 193 (212)
...|.+|.|.+++.+-+.... =+|.||..|-+..+++
T Consensus 8 ~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sik~ 45 (80)
T d2cs3a1 8 PLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKA 45 (80)
T ss_dssp SCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHH
T ss_pred ceeeeeehhhhcCCceEeCCCCcCCceeccccHHHHHh
Confidence 467999999998766443211 1799999999999976
No 24
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.89 E-value=0.26 Score=31.02 Aligned_cols=46 Identities=22% Similarity=0.497 Sum_probs=30.2
Q ss_pred CCCccccccccccCCCCeEEcCCCCcccHHHHH------HHH---hcCCCCCcccc
Q 028200 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIF------EWM---ERSDTCPVCNQ 202 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~------~Wl---~~~~tCPvCr~ 202 (212)
+...| ||...+..+.-+..-.|.-.||..|+. ..+ ...-.||.|+.
T Consensus 15 ~~~~C-iC~~~~~~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~~C~~ 69 (76)
T d1wema_ 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTI 69 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHH
T ss_pred CcCEE-ECCCccCCCeEEEECCCCCcCCccccCCCcccccccCCCCCcEECCCCcC
Confidence 34458 898776554444456789999999982 111 22357999964
No 25
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.00 E-value=0.086 Score=32.23 Aligned_cols=45 Identities=22% Similarity=0.535 Sum_probs=31.5
Q ss_pred CCCccccccccccCCCCeEEcCCCCcccHHHHHHHHhcCCCCCcc
Q 028200 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLACIFEWMERSDTCPVC 200 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~CI~~Wl~~~~tCPvC 200 (212)
....|--|+..+.....-...+|+++|+.+|=.--=+.-..||-|
T Consensus 14 ~~~~C~gC~~~l~~~~~y~C~~C~~~FC~dCD~fiHe~lh~CpgC 58 (59)
T d1z60a1 14 GERFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp SCCEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CCCCccCCCCcCCCCceEECcCCCCccccccchhhhhhhcCCCCC
Confidence 345699999888654334467899999999944322444679987
No 26
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=84.73 E-value=0.29 Score=31.21 Aligned_cols=47 Identities=19% Similarity=0.463 Sum_probs=30.2
Q ss_pred CCCccccccccccCCCCeEEc---CCCCcccHHHHHH----H--Hh---cCCCCCcccccc
Q 028200 156 EEDVCPTCLEEYDAENPRIIT---KCEHHFHLACIFE----W--ME---RSDTCPVCNQEM 204 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l---~C~H~FH~~CI~~----W--l~---~~~tCPvCr~~l 204 (212)
+...| ||......+ ..+.. .|...||..|+-- + .. ..-.||.|+...
T Consensus 15 ~~~~C-~C~~~~~~~-~~i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T d1wewa_ 15 IKVRC-VCGNSLETD-SMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCCC-SSCCCCCCS-CEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CccEe-ECCCccCCC-cEEEEeCCCCCcCCCccccCccccccccccCCCCEEECCCCcCcC
Confidence 34457 999877544 34555 4999999999831 1 11 124699997643
No 27
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.68 E-value=1.9 Score=27.19 Aligned_cols=46 Identities=26% Similarity=0.458 Sum_probs=30.6
Q ss_pred CccccccccccCCCCeE-EcCCCCcccHHHHH--HHH-hc--CCCCCccccc
Q 028200 158 DVCPTCLEEYDAENPRI-ITKCEHHFHLACIF--EWM-ER--SDTCPVCNQE 203 (212)
Q Consensus 158 ~~C~ICle~~~~~~~~~-~l~C~H~FH~~CI~--~Wl-~~--~~tCPvCr~~ 203 (212)
.++-||...+..+...+ .-.|.-.||..|+. ... .. .-.||.|+..
T Consensus 12 pv~CiC~~~~~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~C~~~ 63 (79)
T d1wepa_ 12 PVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAV 63 (79)
T ss_dssp CCCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTT
T ss_pred CeEeECCCccCCCCcEEECCCCCCcEeccccCcchhcCCCCCEEECccCcCC
Confidence 34559998776554433 45689999999985 222 11 2469999864
No 28
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=72.63 E-value=2.3 Score=27.54 Aligned_cols=50 Identities=18% Similarity=0.450 Sum_probs=34.8
Q ss_pred CCCccccccccccC---CCCeE-EcCCCCcccHHHHH-HHHhcCCCCCccccccc
Q 028200 156 EEDVCPTCLEEYDA---ENPRI-ITKCEHHFHLACIF-EWMERSDTCPVCNQEMI 205 (212)
Q Consensus 156 e~~~C~ICle~~~~---~~~~~-~l~C~H~FH~~CI~-~Wl~~~~tCPvCr~~l~ 205 (212)
...+|-||-+.+.. +++-+ .-.|+--.|..|.. ++-+.++.||.|+....
T Consensus 15 ~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Yk 69 (93)
T d1weoa_ 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred ccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhh
Confidence 46679999998733 33222 34588888999975 33355788999988653
No 29
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.94 E-value=0.15 Score=30.22 Aligned_cols=44 Identities=16% Similarity=0.545 Sum_probs=29.3
Q ss_pred ccccccccccCCCCe-EEcCCCCcccHHHHHHHHhcCCCCCcccc
Q 028200 159 VCPTCLEEYDAENPR-IITKCEHHFHLACIFEWMERSDTCPVCNQ 202 (212)
Q Consensus 159 ~C~ICle~~~~~~~~-~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~ 202 (212)
.|.+|...|..-... ..-.||.+|+..|...+......|..|.+
T Consensus 2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~~~~RvC~~C~~ 46 (51)
T d1y02a2 2 SCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR 46 (51)
T ss_dssp CCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred CccccCCcccCCccCcccccCCcccCccccCCCCCCCeECHhHhh
Confidence 488899988654332 23569999999998776555567887754
No 30
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=71.23 E-value=0.5 Score=29.68 Aligned_cols=40 Identities=23% Similarity=0.492 Sum_probs=24.5
Q ss_pred cccccccccCCCCeEEcC---C-CCcccHHHHHHHHhcC----CCCCccccc
Q 028200 160 CPTCLEEYDAENPRIITK---C-EHHFHLACIFEWMERS----DTCPVCNQE 203 (212)
Q Consensus 160 C~ICle~~~~~~~~~~l~---C-~H~FH~~CI~~Wl~~~----~tCPvCr~~ 203 (212)
+-||...... + .+... | ...||..||. |... -.||.|+..
T Consensus 18 ~CiC~~~~~~-~-~i~c~~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~ 65 (71)
T d1wesa_ 18 YCLCNQVSYG-E-MIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 65 (71)
T ss_dssp CSTTCCCCCS-S-EECCSCTTCSCCCEETTTTT--CSSCCSSCCCCTTTSSC
T ss_pred EEEeCCCCCC-C-EEEEECCCCCCcCccCccCC--CCcCCCCcEECcCCccc
Confidence 4499976432 2 33433 4 3579999984 4332 369999763
No 31
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=70.94 E-value=0.48 Score=30.66 Aligned_cols=48 Identities=19% Similarity=0.388 Sum_probs=31.2
Q ss_pred CCCccccccccccCC-CCeE-EcCCCCcccHHHHHHHHh-----c---CCCCCccccc
Q 028200 156 EEDVCPTCLEEYDAE-NPRI-ITKCEHHFHLACIFEWME-----R---SDTCPVCNQE 203 (212)
Q Consensus 156 e~~~C~ICle~~~~~-~~~~-~l~C~H~FH~~CI~~Wl~-----~---~~tCPvCr~~ 203 (212)
...+|.||......+ +.++ .-.|...||..|+...+. . .-.||.|...
T Consensus 15 ~~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~ 72 (88)
T d1weva_ 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred CcCCccCCCCccCCCCCeEEEcCCCCCccccccCCCcccccccccCCCeEECcccCch
Confidence 355799998754332 2233 456899999999875431 1 2359999654
No 32
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=68.45 E-value=1 Score=31.13 Aligned_cols=51 Identities=18% Similarity=0.354 Sum_probs=32.6
Q ss_pred ccCCCccccccccccC-C-CCeEEcCCCCcccHHHHHH-HHhc---CCCCCcccccc
Q 028200 154 IEEEDVCPTCLEEYDA-E-NPRIITKCEHHFHLACIFE-WMER---SDTCPVCNQEM 204 (212)
Q Consensus 154 ~ee~~~C~ICle~~~~-~-~~~~~l~C~H~FH~~CI~~-Wl~~---~~tCPvCr~~l 204 (212)
.+....|.+|...|.. . .......||+.||..|-.. +... .-.|-+|.+.+
T Consensus 45 ~~~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~~~~~~~~~~~~w~C~~C~k~r 101 (124)
T d1zbdb_ 45 GDGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQR 101 (124)
T ss_dssp SCSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHHH
T ss_pred ccCCCcCcccCCcccCCCCCCCcCccCCcccccCCCCCccCCCCCCCEECccCcchH
Confidence 3456679999999864 2 3345678999999999422 1001 13477776543
No 33
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.93 E-value=2.4 Score=25.57 Aligned_cols=37 Identities=19% Similarity=0.381 Sum_probs=26.9
Q ss_pred cCCCccccccccccCCCCeE-EcCCCCcccHHHHHHHH
Q 028200 155 EEEDVCPTCLEEYDAENPRI-ITKCEHHFHLACIFEWM 191 (212)
Q Consensus 155 ee~~~C~ICle~~~~~~~~~-~l~C~H~FH~~CI~~Wl 191 (212)
++...|.+|-..|..-.... .=.||++|+..|...++
T Consensus 6 ~~~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs~~~~ 43 (64)
T d1joca1 6 NEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNA 43 (64)
T ss_dssp GGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEE
T ss_pred ccCCcCcCcCCcccCCccccchhhhCCeecccccCCce
Confidence 45567999999996644333 34599999999976544
No 34
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=64.68 E-value=0.63 Score=31.53 Aligned_cols=31 Identities=26% Similarity=0.495 Sum_probs=21.7
Q ss_pred eEEcCCCCcccHHHHHHHHhcCCCCCcccccccCCC
Q 028200 173 RIITKCEHHFHLACIFEWMERSDTCPVCNQEMIFDL 208 (212)
Q Consensus 173 ~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~l~~~~ 208 (212)
..+.+||-.|- .=+++-..||.|+.+++..+
T Consensus 68 p~CrkCGfvFr-----~~~kkPSRCP~CKSE~Ie~P 98 (105)
T d2gmga1 68 AQCRKCGFVFK-----AEINIPSRCPKCKSEWIEEP 98 (105)
T ss_dssp CBBTTTCCBCC-----CCSSCCSSCSSSCCCCBCCC
T ss_pred hhhhhcCCeec-----ccCCCCCCCCCCCCccccCC
Confidence 34566888882 22455678999999887654
No 35
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=61.99 E-value=2.8 Score=25.99 Aligned_cols=35 Identities=23% Similarity=0.456 Sum_probs=25.8
Q ss_pred CCCccccccccccCCCC-eEEcCCCCcccHHHHHHH
Q 028200 156 EEDVCPTCLEEYDAENP-RIITKCEHHFHLACIFEW 190 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~-~~~l~C~H~FH~~CI~~W 190 (212)
+.+.|.+|...|..-+. ...-.||++|+..|...+
T Consensus 12 ~~~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~~~~ 47 (72)
T d1dvpa2 12 DGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQ 47 (72)
T ss_dssp CCSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEE
T ss_pred cCCccccCCCcccCccccccccccCCeeChhhhCCc
Confidence 34579999999966443 334569999999997654
No 36
>d1rutx3 g.39.1.3 (X:83-113) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.80 E-value=2 Score=22.39 Aligned_cols=27 Identities=22% Similarity=0.538 Sum_probs=18.8
Q ss_pred ccccccccccCCCCeEEcCCCCcccHHH
Q 028200 159 VCPTCLEEYDAENPRIITKCEHHFHLAC 186 (212)
Q Consensus 159 ~C~ICle~~~~~~~~~~l~C~H~FH~~C 186 (212)
.|+-|...+...+-+ +=-=+++||..|
T Consensus 4 ~Ca~C~~~I~~~e~V-mRA~~~VyHl~C 30 (31)
T d1rutx3 4 ACSACGQSIPASELV-MRAQGNVYHLKC 30 (31)
T ss_dssp ECTTTCCEECTTSEE-EEETTEEECGGG
T ss_pred ccccccCcCChhHhh-eecccceeeecc
Confidence 488898888665533 222479999988
No 37
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=57.69 E-value=2.1 Score=27.11 Aligned_cols=11 Identities=27% Similarity=0.908 Sum_probs=10.3
Q ss_pred ccHHHHHHHHh
Q 028200 182 FHLACIFEWME 192 (212)
Q Consensus 182 FH~~CI~~Wl~ 192 (212)
||..|+.+|+.
T Consensus 40 FCRNCLskWy~ 50 (79)
T d2o35a1 40 FCRNCLSNWYR 50 (79)
T ss_dssp CCHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999984
No 38
>d2akla2 g.41.3.5 (A:3-40) Hypothetical protein PA0128, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=54.70 E-value=3 Score=22.69 Aligned_cols=24 Identities=29% Similarity=0.819 Sum_probs=18.4
Q ss_pred ccccccccc--cCCCCeEEcCCCCcc
Q 028200 159 VCPTCLEEY--DAENPRIITKCEHHF 182 (212)
Q Consensus 159 ~C~ICle~~--~~~~~~~~l~C~H~F 182 (212)
.||-|-.+| ..+...+...|+|-+
T Consensus 5 ~CP~C~seytYedg~l~vCPeC~hEW 30 (38)
T d2akla2 5 PCPQCNSEYTYEDGALLVCPECAHEW 30 (38)
T ss_dssp CCTTTCCCCCEECSSSEEETTTTEEE
T ss_pred cCCCCCCcceEcCCCEEECCcccCcC
Confidence 499999987 556677777788864
No 39
>d2co8a2 g.39.1.3 (A:8-43) Nedd9 interacting protein with calponin homology, NICAL (MICAL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.00 E-value=1.6 Score=23.63 Aligned_cols=28 Identities=29% Similarity=0.533 Sum_probs=18.9
Q ss_pred CCCccccccccccCCCCeEEcCC-CCcccHHH
Q 028200 156 EEDVCPTCLEEYDAENPRIITKC-EHHFHLAC 186 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C-~H~FH~~C 186 (212)
..++|.+|-...-.-+ .+.+ |+.||..|
T Consensus 7 ~~~~C~~C~K~VY~~E---rl~a~g~~yHk~C 35 (36)
T d2co8a2 7 AGDLCALCGEHLYVLE---RLCVNGHFFHRSC 35 (36)
T ss_dssp SSCBCSSSCCBCCTTT---BCCBTTBCCBTTT
T ss_pred CCCcccccCCEEeeee---EEEecCcEecccc
Confidence 4577999987753322 2233 89999888
No 40
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=53.93 E-value=4.1 Score=24.69 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=25.2
Q ss_pred CCccccccccccCCCCeE-EcCCCCcccHHHHHHHH
Q 028200 157 EDVCPTCLEEYDAENPRI-ITKCEHHFHLACIFEWM 191 (212)
Q Consensus 157 ~~~C~ICle~~~~~~~~~-~l~C~H~FH~~CI~~Wl 191 (212)
.+.|.+|-..|..-.... .-.||.+|+..|...++
T Consensus 5 ~~~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~ 40 (67)
T d1vfya_ 5 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSI 40 (67)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEE
T ss_pred CcccccCCCcccCcccccccccCCCEecccccCCcE
Confidence 356999999996543322 34599999999976553
No 41
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=51.48 E-value=2 Score=26.36 Aligned_cols=44 Identities=20% Similarity=0.256 Sum_probs=29.0
Q ss_pred ccccccccccCCCC-eEEcCCCCcccHHHHHHHHh----cCCCCCccccc
Q 028200 159 VCPTCLEEYDAENP-RIITKCEHHFHLACIFEWME----RSDTCPVCNQE 203 (212)
Q Consensus 159 ~C~ICle~~~~~~~-~~~l~C~H~FH~~CI~~Wl~----~~~tCPvCr~~ 203 (212)
.| ||...+..++. +..-.|...||..|+..=.. ..-.||.|+..
T Consensus 18 ~C-~C~~~~~~~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~~C~~~ 66 (72)
T d1weea_ 18 DC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp CC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred Ee-eCCCCcCCCCeEEEeCCCCCcCchhhcCCccccCCCCcEECcCCcCc
Confidence 47 78876655554 33467999999999753211 23469998664
No 42
>d2apob1 g.41.16.1 (B:403-457) Ribosome biogenesis protein Nop10 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=43.78 E-value=6.6 Score=23.07 Aligned_cols=20 Identities=20% Similarity=0.738 Sum_probs=16.6
Q ss_pred cCCCCCcccccccCCCCCCC
Q 028200 193 RSDTCPVCNQEMIFDLPVDY 212 (212)
Q Consensus 193 ~~~tCPvCr~~l~~~~~~~~ 212 (212)
-+..||.|......-.|..|
T Consensus 15 L~~~CP~CG~~t~~a~P~rf 34 (55)
T d2apob1 15 LKEICPKCGEKTVIPKPPKF 34 (55)
T ss_dssp SSSBCSSSCSBCBCCCCCCC
T ss_pred ccccCcCCCCccCccCCCCC
Confidence 36789999998888888776
No 43
>d2d8ya1 g.39.1.3 (A:9-43) Eplin, LIMA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.78 E-value=5 Score=21.37 Aligned_cols=27 Identities=19% Similarity=0.532 Sum_probs=18.3
Q ss_pred CCccccccccccCCCCeEEcCC-CCcccHHH
Q 028200 157 EDVCPTCLEEYDAENPRIITKC-EHHFHLAC 186 (212)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l~C-~H~FH~~C 186 (212)
.+.|.+|-...-.-+ .+.+ |+.||..|
T Consensus 7 ~~kC~~C~K~VY~~E---~~~a~g~~~Hk~C 34 (35)
T d2d8ya1 7 RETCVECQKTVYPME---RLLANQQVFHISC 34 (35)
T ss_dssp SCBCTTTCCBCCTTS---EEECSSSEEETTT
T ss_pred CcccccCCCEEeeee---eEecCCeehhhcc
Confidence 567999987754422 2234 88999887
No 44
>d2d8va1 g.43.1.1 (A:8-61) Zinc finger FYVE domain-containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.59 E-value=6 Score=23.09 Aligned_cols=26 Identities=23% Similarity=0.493 Sum_probs=19.5
Q ss_pred cccccccccCCCCeEEcCC-CCcccHHHHHH
Q 028200 160 CPTCLEEYDAENPRIITKC-EHHFHLACIFE 189 (212)
Q Consensus 160 C~ICle~~~~~~~~~~l~C-~H~FH~~CI~~ 189 (212)
|.||.++- .+..+.| |-.||..|..+
T Consensus 4 C~ICneDA----~lrC~gCdgdLyC~rC~rE 30 (54)
T d2d8va1 4 CCICNEDA----TLRCAGCDGDLYCARCFRE 30 (54)
T ss_dssp CTTTCSCC----CEEETTTTSEEECSSHHHH
T ss_pred eEEecCCC----ceEecCCCCceehHHHHHH
Confidence 88998842 3566777 78899998766
No 45
>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=42.13 E-value=3.8 Score=23.05 Aligned_cols=25 Identities=16% Similarity=0.401 Sum_probs=15.8
Q ss_pred eEEcCCCCcccHHHHHHHHhcCCCCCccccc
Q 028200 173 RIITKCEHHFHLACIFEWMERSDTCPVCNQE 203 (212)
Q Consensus 173 ~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~ 203 (212)
.+.+.|||++-.. +--..||+|...
T Consensus 9 W~C~~CGyi~~g~------~aP~~CPvC~~p 33 (44)
T d1lkoa2 9 WRCRNCGYVHEGT------GAPELCPACAHP 33 (44)
T ss_dssp EEETTTCCEEEEE------ECCSBCTTTCCB
T ss_pred EEcCCCCcEEECC------CCCCcCCCCCCc
Confidence 3456788886531 224689999763
No 46
>d2ey4e1 g.41.16.1 (E:4-55) Ribosome biogenesis protein Nop10 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=40.31 E-value=5.7 Score=23.10 Aligned_cols=20 Identities=25% Similarity=0.728 Sum_probs=15.8
Q ss_pred cCCCCCcccccccCCCCCCC
Q 028200 193 RSDTCPVCNQEMIFDLPVDY 212 (212)
Q Consensus 193 ~~~tCPvCr~~l~~~~~~~~ 212 (212)
-+..||.|......-.|..|
T Consensus 13 L~~~CP~CG~~t~~a~Parf 32 (52)
T d2ey4e1 13 LKEVCPVCGEKTKVAHPPRF 32 (52)
T ss_dssp SSSBCTTTCCBCEESSCCCC
T ss_pred ccccCcCCCCcccccCCCCC
Confidence 36789999988887777766
No 47
>d2dloa1 g.39.1.3 (A:8-42) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.50 E-value=4.2 Score=21.67 Aligned_cols=27 Identities=26% Similarity=0.592 Sum_probs=18.7
Q ss_pred CCccccccccccCCCCeEEcCCCCcccHHH
Q 028200 157 EDVCPTCLEEYDAENPRIITKCEHHFHLAC 186 (212)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l~C~H~FH~~C 186 (212)
-+.|.+|-+.+.+ .++--.|-.||-.|
T Consensus 8 lEkC~~C~~~I~d---riLrA~Gk~yHP~C 34 (35)
T d2dloa1 8 LEKCATCSQPILD---RILRAMGKAYHPGC 34 (35)
T ss_dssp CCBCTTTCCBCCS---CCEEETTEEECTTT
T ss_pred HHHHHHhchHHHH---HHHHHhCCCCCCCC
Confidence 4469999988765 23333678888776
No 48
>d1v6ga1 g.39.1.3 (A:1-41) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.65 E-value=4.6 Score=22.30 Aligned_cols=28 Identities=14% Similarity=0.272 Sum_probs=19.3
Q ss_pred CCCccccccccccCCCCeEEcCCCCcccHHH
Q 028200 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLAC 186 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~C 186 (212)
-...|..|.+-++ +..+.. =+|.||-.|
T Consensus 14 fG~~C~~C~~~It-G~V~~A--g~~~yHP~C 41 (41)
T d1v6ga1 14 YGTRCFSCDQFIE-GEVVSA--LGKTYHPDC 41 (41)
T ss_dssp CCCBCTTTCCBCC-SCCEEE--TTEEECTTT
T ss_pred hCcccccccCEee-eeeeEe--cCcccCCCC
Confidence 3557999988664 444443 468999877
No 49
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.06 E-value=2.6 Score=26.08 Aligned_cols=36 Identities=22% Similarity=0.587 Sum_probs=23.8
Q ss_pred Cccccccccc--cCCCC-eEEcCCCCcccHHHHHHHHhc
Q 028200 158 DVCPTCLEEY--DAENP-RIITKCEHHFHLACIFEWMER 193 (212)
Q Consensus 158 ~~C~ICle~~--~~~~~-~~~l~C~H~FH~~CI~~Wl~~ 193 (212)
.-||-|--.+ +.+.. .+...|++.||..|-.+|-..
T Consensus 19 k~CP~C~~~~~~~~~~~~~~C~~C~~~fC~~C~~~w~~~ 57 (73)
T d2ct7a1 19 LWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQ 57 (73)
T ss_dssp ECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBCCTT
T ss_pred CCCCCCCCEeEECCCCCEEEcCCCCCeECcccCcchhcC
Confidence 3577776544 23333 344579999999999888433
No 50
>d1lv3a_ g.39.1.9 (A:) Hypothetical zinc finger protein YacG {Escherichia coli [TaxId: 562]}
Probab=35.03 E-value=6.3 Score=23.97 Aligned_cols=12 Identities=25% Similarity=1.146 Sum_probs=8.8
Q ss_pred CCCcccccccCC
Q 028200 196 TCPVCNQEMIFD 207 (212)
Q Consensus 196 tCPvCr~~l~~~ 207 (212)
.||+|++.+.+.
T Consensus 8 ~CP~C~k~~~w~ 19 (65)
T d1lv3a_ 8 NCPTCGKTVVWG 19 (65)
T ss_dssp ECTTTCCEEECS
T ss_pred eCCCCCCccccC
Confidence 489998877553
No 51
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.20 E-value=14 Score=23.44 Aligned_cols=47 Identities=17% Similarity=0.346 Sum_probs=32.2
Q ss_pred CCCccccccccccCCCCeEE-cCCCCcccHHHHHHHHhc-------CCCCCcccc
Q 028200 156 EEDVCPTCLEEYDAENPRII-TKCEHHFHLACIFEWMER-------SDTCPVCNQ 202 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~-l~C~H~FH~~CI~~Wl~~-------~~tCPvCr~ 202 (212)
.+..|.+|...|..-+.... -.||-+||..|...++.. ...|-.|-.
T Consensus 8 ~~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~RVC~~C~~ 62 (88)
T d1wfka_ 8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHT 62 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHHH
T ss_pred ccCcCcccCchhccccccccccccChhhChHHhCCccccCCCCCCCCeECHHHHH
Confidence 45569999999976544333 459999999998766532 125777743
No 52
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.01 E-value=7 Score=19.80 Aligned_cols=11 Identities=27% Similarity=0.776 Sum_probs=6.5
Q ss_pred Ccccccccccc
Q 028200 158 DVCPTCLEEYD 168 (212)
Q Consensus 158 ~~C~ICle~~~ 168 (212)
..||||...|.
T Consensus 4 ~~cpic~qrfk 14 (32)
T d2epqa1 4 YSCPVCGLRFK 14 (32)
T ss_dssp SEETTTTEECS
T ss_pred cccchHHHHhh
Confidence 34666666553
No 53
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=31.86 E-value=8.2 Score=23.81 Aligned_cols=38 Identities=29% Similarity=0.645 Sum_probs=21.9
Q ss_pred CccccccccccCCC-CeEEcCCCCcccHHHHHHHHhcCCCCCcccccc
Q 028200 158 DVCPTCLEEYDAEN-PRIITKCEHHFHLACIFEWMERSDTCPVCNQEM 204 (212)
Q Consensus 158 ~~C~ICle~~~~~~-~~~~l~C~H~FH~~CI~~Wl~~~~tCPvCr~~l 204 (212)
..||+|.-+++..+ ......|...| +....||-|.++|
T Consensus 3 ~~CP~C~~eL~~~~~~~~C~~C~~~~---------~~~a~CPdC~~~L 41 (71)
T d2jnea1 3 LHCPQCQHVLDQDNGHARCRSCGEFI---------EMKALCPDCHQPL 41 (71)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEE---------EEEEECTTTCSBC
T ss_pred CcCCCccCcccccCCCEehhhhhhhh---------eeEEeCCccccHH
Confidence 35899988765422 22223343332 3456688888876
No 54
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.83 E-value=6.2 Score=19.66 Aligned_cols=15 Identities=27% Similarity=0.631 Sum_probs=10.9
Q ss_pred cCCCccccccccccC
Q 028200 155 EEEDVCPTCLEEYDA 169 (212)
Q Consensus 155 ee~~~C~ICle~~~~ 169 (212)
+...+|.+|.|.|..
T Consensus 2 eqvftcs~cqe~f~r 16 (30)
T d2dlqa3 2 EQVFTCSVCQETFRR 16 (30)
T ss_dssp CCCEECSSSCCEESS
T ss_pred cceEEeHHHHHHHHH
Confidence 345679999998853
No 55
>d2pk7a1 b.171.1.1 (A:3-61) Uncharacterized protein PFL1779 {Pseudomonas fluorescens [TaxId: 294]}
Probab=29.86 E-value=7 Score=23.23 Aligned_cols=13 Identities=23% Similarity=0.912 Sum_probs=10.0
Q ss_pred CCCcccccccCCC
Q 028200 196 TCPVCNQEMIFDL 208 (212)
Q Consensus 196 tCPvCr~~l~~~~ 208 (212)
.||+|+..+.++.
T Consensus 8 ~CP~ck~~L~~~~ 20 (59)
T d2pk7a1 8 ACPICKGPLKLSA 20 (59)
T ss_dssp CCTTTCCCCEECT
T ss_pred ECCCCCCcceEeC
Confidence 5999998887654
No 56
>d1b8ta3 g.39.1.3 (A:101-143) Cysteine-rich (intestinal) protein, CRP, CRIP {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=28.19 E-value=10 Score=20.96 Aligned_cols=29 Identities=28% Similarity=0.518 Sum_probs=20.0
Q ss_pred CCCccccccccccCCCCeEEcCCCCcccHHH
Q 028200 156 EEDVCPTCLEEYDAENPRIITKCEHHFHLAC 186 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C~H~FH~~C 186 (212)
..+.|+.|-...-.-+.+.. =|+.||..|
T Consensus 14 ~~~kC~~C~k~VY~~E~~~~--~g~~~Hk~C 42 (43)
T d1b8ta3 14 GSDGCPRCGQAVYAAEKVIG--AGKSWHKSC 42 (43)
T ss_dssp CCEECTTTSCEECSSSCEEE--TTEEECTTT
T ss_pred CCCcCccCCCEeeHHHHhhc--CCCccccCC
Confidence 45779999877544343332 589999887
No 57
>d1b8ta1 g.39.1.3 (A:1-35) Cysteine-rich (intestinal) protein, CRP, CRIP {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=27.85 E-value=8.4 Score=20.01 Aligned_cols=28 Identities=21% Similarity=0.545 Sum_probs=18.1
Q ss_pred CCCccccccccccCCCCeEEcCC-CCcccHHH
Q 028200 156 EEDVCPTCLEEYDAENPRIITKC-EHHFHLAC 186 (212)
Q Consensus 156 e~~~C~ICle~~~~~~~~~~l~C-~H~FH~~C 186 (212)
....|..|....--.+.+ .| |..||..|
T Consensus 6 gg~kcg~c~ktvy~aeev---qc~g~sfhk~c 34 (35)
T d1b8ta1 6 GGKKCGVCQKAVYFAEEV---QCEGSSFHKSC 34 (35)
T ss_dssp CCEECTTTCCEECSSCCE---EETTEEECTTT
T ss_pred CCceeccccceEeeeeee---eecCccccccc
Confidence 345689998764333323 36 78899887
No 58
>d2cu8a1 g.39.1.3 (A:8-37) Cysteine-rich (intestinal) protein, CRP, CRIP {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.16 E-value=15 Score=18.69 Aligned_cols=15 Identities=27% Similarity=0.866 Sum_probs=11.6
Q ss_pred CCCCCcccccccCCC
Q 028200 194 SDTCPVCNQEMIFDL 208 (212)
Q Consensus 194 ~~tCPvCr~~l~~~~ 208 (212)
+..||-|.+.+.+-+
T Consensus 2 ~~~CprC~K~VYfaE 16 (30)
T d2cu8a1 2 ASKCPKCDKTVYFAE 16 (30)
T ss_dssp CCBCTTTCCBCCTTT
T ss_pred CCcCCCCCCceeeHH
Confidence 457999999887654
No 59
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}
Probab=27.04 E-value=7.9 Score=18.55 Aligned_cols=10 Identities=40% Similarity=1.321 Sum_probs=7.4
Q ss_pred cccccccccC
Q 028200 160 CPTCLEEYDA 169 (212)
Q Consensus 160 C~ICle~~~~ 169 (212)
||.|+.+|..
T Consensus 4 cp~cfkeftr 13 (26)
T d2drpa2 4 CPFCFKEFTR 13 (26)
T ss_dssp CTTTCCEESC
T ss_pred CchhhHHhcc
Confidence 8888887743
No 60
>d1x6aa1 g.39.1.3 (A:8-41) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.31 E-value=12 Score=19.50 Aligned_cols=27 Identities=19% Similarity=0.495 Sum_probs=19.7
Q ss_pred CCccccccccccCCCCeEEcCCCCcccHHH
Q 028200 157 EDVCPTCLEEYDAENPRIITKCEHHFHLAC 186 (212)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l~C~H~FH~~C 186 (212)
...|-.|-+.+.. +++.-=.|.||-+|
T Consensus 8 ge~C~~C~~~itG---pvMvAG~~K~HPEC 34 (34)
T d1x6aa1 8 GEFCHGCSLLMTG---PFMVAGEFKYHPEC 34 (34)
T ss_dssp SCBCTTTCCBCCS---CCBCCTTCCBCTTS
T ss_pred HHHhhhhHhhccc---ceeeecccccCCCC
Confidence 4569999886553 55666789999877
No 61
>d2jnya1 b.171.1.1 (A:1-59) Uncharacterized protein Cgl1405/cg1592 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=24.16 E-value=17 Score=21.30 Aligned_cols=27 Identities=15% Similarity=0.196 Sum_probs=16.8
Q ss_pred CCCcccccccccc---CCCCeEEcCCCCcc
Q 028200 156 EEDVCPTCLEEYD---AENPRIITKCEHHF 182 (212)
Q Consensus 156 e~~~C~ICle~~~---~~~~~~~l~C~H~F 182 (212)
+-..||+|-..+. .+..++...|+..|
T Consensus 9 ~iL~CP~ck~~L~~~~~~~~Lvc~~~~~~Y 38 (59)
T d2jnya1 9 EVLACPKDKGPLRYLESEQLLVNERLNLAY 38 (59)
T ss_dssp CCCBCTTTCCBCEEETTTTEEEETTTTEEE
T ss_pred HHhcCCCCCCEeEEeCCCCEEEcCccCccc
Confidence 4457999987763 23345556676665
No 62
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}
Probab=23.17 E-value=9.7 Score=21.55 Aligned_cols=39 Identities=31% Similarity=0.646 Sum_probs=22.7
Q ss_pred ccccccccccCCCCeEEcC---C-CCcccHHHHHHHHhcC----CCCCcccc
Q 028200 159 VCPTCLEEYDAENPRIITK---C-EHHFHLACIFEWMERS----DTCPVCNQ 202 (212)
Q Consensus 159 ~C~ICle~~~~~~~~~~l~---C-~H~FH~~CI~~Wl~~~----~tCPvCr~ 202 (212)
-| ||...... + .+.-. | .-.||..||. |... =.||.|++
T Consensus 4 yC-~C~~~~~~-~-mi~Cd~~~C~~~WfH~~Cvg--l~~~p~~~w~C~~C~~ 50 (51)
T d2pnxa1 4 YC-LCHQVSYG-E-MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 50 (51)
T ss_dssp ET-TTTEECCS-E-EEECSCTTCSSCEEEGGGGT--CSSCCSSCCCCHHHHC
T ss_pred EE-EcCCCCCC-C-EEEEecCCCCCCCEeCCccC--CCcCCCCcEECcCCCC
Confidence 47 78766432 2 33322 3 4579999985 3222 24888875
No 63
>d2gyc11 g.41.8.6 (1:1-52) Ribosomal protein L33p {Escherichia coli [TaxId: 562]}
Probab=23.00 E-value=15 Score=21.19 Aligned_cols=15 Identities=27% Similarity=0.401 Sum_probs=11.5
Q ss_pred CCCCCcccccccCCC
Q 028200 194 SDTCPVCNQEMIFDL 208 (212)
Q Consensus 194 ~~tCPvCr~~l~~~~ 208 (212)
.+-||+|++-+.+.+
T Consensus 36 ~Ky~p~~~khtlhkE 50 (52)
T d2gyc11 36 KKFDPVVRQHVIYKE 50 (52)
T ss_dssp CCBCCSSSSSBCCCC
T ss_pred EccCCCCCceeeEEe
Confidence 456999998887764
No 64
>d1x3ha1 g.39.1.3 (A:8-42) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.69 E-value=10 Score=19.91 Aligned_cols=27 Identities=19% Similarity=0.436 Sum_probs=18.7
Q ss_pred CCccccccccccCCCCeEEcCCCCcccHHH
Q 028200 157 EDVCPTCLEEYDAENPRIITKCEHHFHLAC 186 (212)
Q Consensus 157 ~~~C~ICle~~~~~~~~~~l~C~H~FH~~C 186 (212)
...|..|...+.. + ++.--+..||.+|
T Consensus 8 apkC~~C~~~I~g-~--~v~Al~~~wHpeC 34 (35)
T d1x3ha1 8 SPKCGGCNRPVLE-N--YLSAMDTVWHPEC 34 (35)
T ss_dssp SCBCTTTCCBCCS-S--CEEETTEEECTTT
T ss_pred ChhhhhcCCcccc-h--heeecCCccCccc
Confidence 4569999988754 3 2334578888877
No 65
>d1x3ha2 g.39.1.3 (A:43-74) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.68 E-value=12 Score=19.35 Aligned_cols=26 Identities=27% Similarity=0.660 Sum_probs=16.6
Q ss_pred ccccccccccCCCCeEE---cCCCCcccH
Q 028200 159 VCPTCLEEYDAENPRII---TKCEHHFHL 184 (212)
Q Consensus 159 ~C~ICle~~~~~~~~~~---l~C~H~FH~ 184 (212)
+|..|+..|..+.--.. .-|..+||.
T Consensus 1 VC~~C~~PF~~~~Fy~~~g~PyCe~HyH~ 29 (32)
T d1x3ha2 1 VCGDCFTSFSTGSFFELDGRPFCELHYHH 29 (32)
T ss_dssp BCSSSCCBSCSSCCEESSSCEECHHHHHH
T ss_pred CcCccCCcCCCCCeEeECCccchHHhhhh
Confidence 58889998866542211 228888875
No 66
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.31 E-value=15 Score=17.72 Aligned_cols=10 Identities=30% Similarity=1.291 Sum_probs=6.6
Q ss_pred CCCccccccc
Q 028200 196 TCPVCNQEMI 205 (212)
Q Consensus 196 tCPvCr~~l~ 205 (212)
.||.|.+.+.
T Consensus 2 qcp~c~k~f~ 11 (27)
T d2dlqa4 2 ECPTCHKKFL 11 (27)
T ss_dssp CCTTTCCCCS
T ss_pred cCcchHHHHH
Confidence 4788877654
No 67
>d2j9ub1 g.41.11.1 (B:115-161) Vacuolar protein-sorting-associated protein 36, VPS36 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=22.12 E-value=10 Score=21.24 Aligned_cols=9 Identities=44% Similarity=1.084 Sum_probs=6.9
Q ss_pred Ccccccccc
Q 028200 158 DVCPTCLEE 166 (212)
Q Consensus 158 ~~C~ICle~ 166 (212)
-+||||+-.
T Consensus 4 W~CPICm~~ 12 (47)
T d2j9ub1 4 WVCPICMVS 12 (47)
T ss_dssp EECTTTCCE
T ss_pred eecceeeee
Confidence 369999864
Done!