Your job contains 1 sequence.
>028201
MNIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKI
LARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVAVGMKGASKAMAAMNKQMEPAK
QAKVMREFQKQSAQMDMTTEMMSDTIDDALDNDEAEEETEELTNQVLDEIGVDVASQLSA
APKGKIASKNTEDASSSGIDELEKRLAALRNP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028201
(212 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024107 - symbol:VPS2.3 "vacuolar protein sort... 740 2.8e-73 1
TAIR|locus:2163396 - symbol:VPS2.2 species:3702 "Arabidop... 600 1.9e-58 1
TAIR|locus:2054612 - symbol:VPS2.1 species:3702 "Arabidop... 321 7.1e-29 1
UNIPROTKB|F1NR65 - symbol:CHMP2B "Charged multivesicular ... 306 2.8e-27 1
UNIPROTKB|Q5F3A2 - symbol:CHMP2B "Charged multivesicular ... 303 5.7e-27 1
ZFIN|ZDB-GENE-040426-2539 - symbol:chmp2bb "chromatin mod... 302 7.3e-27 1
DICTYBASE|DDB_G0292400 - symbol:vps2B "SNF7 family protei... 293 6.6e-26 1
UNIPROTKB|Q9UQN3 - symbol:CHMP2B "Charged multivesicular ... 293 6.6e-26 1
UNIPROTKB|E2R417 - symbol:CHMP2B "Uncharacterized protein... 290 1.4e-25 1
UNIPROTKB|F2Z5Q1 - symbol:CHMP2B "Uncharacterized protein... 290 1.4e-25 1
MGI|MGI:1916192 - symbol:Chmp2b "charged multivesicular b... 290 1.4e-25 1
UNIPROTKB|Q3SX42 - symbol:CHMP2B "Charged multivesicular ... 287 2.9e-25 1
WB|WBGene00007216 - symbol:C01A2.4 species:6239 "Caenorha... 286 3.6e-25 1
FB|FBgn0035589 - symbol:CHMP2B "Charged multivesicular bo... 285 4.6e-25 1
ZFIN|ZDB-GENE-040426-2922 - symbol:bc2 "putative breast a... 281 1.2e-24 1
UNIPROTKB|E2RIU2 - symbol:CHMP2A "Uncharacterized protein... 278 2.6e-24 1
UNIPROTKB|Q3T0U5 - symbol:CHMP2A "Chromatin modifying pro... 274 6.8e-24 1
UNIPROTKB|O43633 - symbol:CHMP2A "Charged multivesicular ... 274 6.8e-24 1
UNIPROTKB|C9J0A7 - symbol:CHMP2B "Charged multivesicular ... 148 1.0e-23 2
ZFIN|ZDB-GENE-070628-3 - symbol:chmp2ba "chromatin modify... 272 1.1e-23 1
MGI|MGI:1916203 - symbol:Chmp2a "charged multivesicular b... 270 1.8e-23 1
RGD|1305050 - symbol:Chmp2a "charged multivesicular body ... 270 1.8e-23 1
UNIPROTKB|Q5ZHN1 - symbol:CHMP2A "Charged multivesicular ... 268 2.9e-23 1
FB|FBgn0039402 - symbol:vps2 "vps2" species:7227 "Drosoph... 257 4.3e-22 1
CGD|CAL0003689 - symbol:VPS2 species:5476 "Candida albica... 249 3.0e-21 1
UNIPROTKB|Q5A501 - symbol:VPS2 "Putative uncharacterized ... 249 3.0e-21 1
ASPGD|ASPL0000001940 - symbol:AN6898 species:162425 "Emer... 248 3.9e-21 1
SGD|S000001485 - symbol:DID4 "Class E Vps protein of the ... 242 1.7e-20 1
WB|WBGene00012903 - symbol:vps-2 species:6239 "Caenorhabd... 238 4.4e-20 1
POMBASE|SPAC4F8.01 - symbol:did4 "ESCRT III complex subun... 237 5.7e-20 1
DICTYBASE|DDB_G0290087 - symbol:vps2A "SNF7 family protei... 212 2.5e-17 1
TAIR|locus:2172686 - symbol:VPS24.1 species:3702 "Arabido... 199 6.0e-16 1
WB|WBGene00020866 - symbol:T27F7.1 species:6239 "Caenorha... 191 4.2e-15 1
DICTYBASE|DDB_G0284769 - symbol:vps24 "SNF7 family protei... 172 4.4e-13 1
UNIPROTKB|I3LSS2 - symbol:CHMP2A "Uncharacterized protein... 172 4.4e-13 1
UNIPROTKB|Q7LBR1 - symbol:CHMP1B "Charged multivesicular ... 168 1.2e-12 1
MGI|MGI:1920159 - symbol:Chmp1a "charged multivesicular b... 168 1.2e-12 1
RGD|1311083 - symbol:Chmp1a "charged multivesicular body ... 168 1.2e-12 1
RGD|1593500 - symbol:Chmp1b "charged multivesicular body ... 168 1.2e-12 1
UNIPROTKB|F1NPS5 - symbol:CHMP1A "Uncharacterized protein... 166 1.9e-12 1
UNIPROTKB|F1NVQ6 - symbol:CHMP1B "Charged multivesicular ... 166 1.9e-12 1
UNIPROTKB|Q32KR9 - symbol:CHMP1A "Uncharacterized protein... 166 1.9e-12 1
UNIPROTKB|Q5E994 - symbol:CHMP1B "Charged multivesicular ... 166 1.9e-12 1
UNIPROTKB|I3LU89 - symbol:CHMP1A "Uncharacterized protein... 166 1.9e-12 1
UNIPROTKB|Q58CS7 - symbol:CHMP3 "Charged multivesicular b... 165 2.4e-12 1
MGI|MGI:1914314 - symbol:Chmp1b "charged multivesicular b... 165 2.4e-12 1
UNIPROTKB|E1BZL2 - symbol:CHMP1A "Uncharacterized protein... 164 3.1e-12 1
UNIPROTKB|Q9HD42 - symbol:CHMP1A "Charged multivesicular ... 164 3.1e-12 1
UNIPROTKB|Q9Y3E7 - symbol:CHMP3 "Charged multivesicular b... 164 3.1e-12 1
MGI|MGI:1914278 - symbol:2610002M06Rik "RIKEN cDNA 261000... 164 3.1e-12 1
RGD|1566265 - symbol:RGD1566265 "similar to RIKEN cDNA 26... 164 3.1e-12 1
ZFIN|ZDB-GENE-040426-1474 - symbol:chmp1a "chromatin modi... 164 3.1e-12 1
UNIPROTKB|E1C230 - symbol:VPS24 "Uncharacterized protein"... 162 5.0e-12 1
UNIPROTKB|E2RTK6 - symbol:CHMP1A "Uncharacterized protein... 162 5.0e-12 1
ZFIN|ZDB-GENE-030131-8370 - symbol:chmp1b "chromatin modi... 162 5.0e-12 1
UNIPROTKB|Q5ZKX1 - symbol:CHMP1B "Charged multivesicular ... 161 6.4e-12 1
ZFIN|ZDB-GENE-040426-2600 - symbol:chmp3 "charged multive... 160 8.2e-12 1
UNIPROTKB|I3LFQ9 - symbol:CHMP3 "Uncharacterized protein"... 158 1.3e-11 1
RGD|708556 - symbol:Chmp3 "charged multivesicular body pr... 158 1.3e-11 1
UNIPROTKB|E2RDX0 - symbol:CHMP3 "Uncharacterized protein"... 159 2.4e-11 1
MGI|MGI:1913950 - symbol:Chmp3 "charged multivesicular bo... 154 3.5e-11 1
FB|FBgn0036805 - symbol:Chmp1 "Chmp1" species:7227 "Droso... 149 1.2e-10 1
RGD|1306781 - symbol:Chmp2b "charged multivesicular body ... 148 1.5e-10 1
DICTYBASE|DDB_G0267394 - symbol:vps46 "SNF7 family protei... 145 3.2e-10 1
UNIPROTKB|F8VVT7 - symbol:CHMP1A "Charged multivesicular ... 144 4.1e-10 1
FB|FBgn0037231 - symbol:vps24 "Charged multivesicular bod... 143 5.2e-10 1
UNIPROTKB|F1SVC7 - symbol:CHMP3 "Uncharacterized protein"... 141 8.4e-10 1
WB|WBGene00017735 - symbol:F23C8.6 species:6239 "Caenorha... 137 2.2e-09 1
TAIR|locus:2007883 - symbol:VPS46.1 "vacuolar protein sor... 132 7.6e-09 1
CGD|CAL0000893 - symbol:orf19.4307 species:5476 "Candida ... 135 1.2e-08 1
UNIPROTKB|Q5AG72 - symbol:DID2 "Putative uncharacterized ... 135 1.2e-08 1
TAIR|locus:2032607 - symbol:VPS46.2 species:3702 "Arabido... 130 1.2e-08 1
UNIPROTKB|F5H875 - symbol:CHMP1A "Charged multivesicular ... 129 1.6e-08 1
UNIPROTKB|H9L0W3 - symbol:CHMP2A "Charged multivesicular ... 114 6.1e-07 1
TAIR|locus:2075924 - symbol:VPS24.2 species:3702 "Arabido... 117 6.9e-06 1
SGD|S000006435 - symbol:DID2 "Class E protein of the vacu... 116 1.0e-05 1
SGD|S000001524 - symbol:VPS24 "Subunit of the ESCRT-III c... 101 0.00012 2
POMBASE|SPBC13G1.12 - symbol:did2 "ESCRT III complex subu... 104 0.00046 1
ASPGD|ASPL0000002845 - symbol:vps24 species:162425 "Emeri... 103 0.00090 1
>TAIR|locus:2024107 [details] [associations]
symbol:VPS2.3 "vacuolar protein sorting-associated
protein 2.3" species:3702 "Arabidopsis thaliana" [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISS] [GO:0000815 "ESCRT III complex"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC003027 GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177218 KO:K12192 OMA:DPQKTLK
EMBL:AY052238 EMBL:AY060501 IPI:IPI00517467 PIR:D86170
RefSeq:NP_563696.1 UniGene:At.26425 ProteinModelPortal:Q941D5
SMR:Q941D5 IntAct:Q941D5 PRIDE:Q941D5 EnsemblPlants:AT1G03950.1
GeneID:839362 KEGG:ath:AT1G03950 TAIR:At1g03950 InParanoid:Q941D5
PhylomeDB:Q941D5 ProtClustDB:CLSN2687652 Genevestigator:Q941D5
Uniprot:Q941D5
Length = 210
Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 152/210 (72%), Positives = 164/210 (78%)
Query: 1 MNIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKI 60
MNIF+KKPNP+E LRESKREM ATRG+EKEIG+LQ EEKKLV EIKRTAK+GNEGATKI
Sbjct: 1 MNIFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKI 60
Query: 61 LARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAK 120
LARQLIRLRQQIANLQGSRAQ+RGIATHTQAMHAH+SV M+PAK
Sbjct: 61 LARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAK 120
Query: 121 QAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSA 180
QAKVMREFQKQSAQMDMTTEMMSD+I QVLDEIG+D+ASQLS+
Sbjct: 121 QAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSS 180
Query: 181 APKGKIASKNTEDASSSGIDELEKRLAALR 210
APKGKI K ED SSGIDELEKRLAALR
Sbjct: 181 APKGKIGGKKAEDVGSSGIDELEKRLAALR 210
>TAIR|locus:2163396 [details] [associations]
symbol:VPS2.2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] InterPro:IPR005024
Pfam:PF03357 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0015031
EMBL:AB017065 EMBL:AB024024 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 EMBL:AK227410 EMBL:BT005848
IPI:IPI00548186 IPI:IPI00892046 RefSeq:NP_001119371.1
RefSeq:NP_199269.1 UniGene:At.30067 ProteinModelPortal:Q0WTY4
IntAct:Q0WTY4 STRING:Q0WTY4 PaxDb:Q0WTY4 PRIDE:Q0WTY4
EnsemblPlants:AT5G44560.1 GeneID:834483 KEGG:ath:AT5G44560
TAIR:At5g44560 InParanoid:Q0WTY4 OMA:APKGRIG PhylomeDB:Q0WTY4
ProtClustDB:CLSN2916725 Genevestigator:Q0WTY4 Uniprot:Q0WTY4
Length = 222
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 130/220 (59%), Positives = 155/220 (70%)
Query: 1 MNIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKI 60
MNIF KK PK+ALR SKREM ATRG+E+EI +LQ EEK+LVAEIK+TAKTGNE ATKI
Sbjct: 1 MNIFKKKTTPKDALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKI 60
Query: 61 LARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAK 120
LARQL+RLRQQI NLQGSRAQIRG+ THTQA++A +S+ QM P K
Sbjct: 61 LARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTK 120
Query: 121 QAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSA 180
QAKV+++FQKQSAQ+DMT EMMS+ I QVLDEIGV VASQLS+
Sbjct: 121 QAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSS 180
Query: 181 APKGKIASKNT----------EDASSSGIDELEKRLAALR 210
APKG+IA+K +++ SS +DELEKRLA+LR
Sbjct: 181 APKGRIATKTAAPPASTAATNKNSESSEVDELEKRLASLR 220
>TAIR|locus:2054612 [details] [associations]
symbol:VPS2.1 species:3702 "Arabidopsis thaliana"
[GO:0015031 "protein transport" evidence=IEA;IMP] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005771 "multivesicular body" evidence=IDA] [GO:0006944
"cellular membrane fusion" evidence=RCA] [GO:0009644 "response to
high light intensity" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] [GO:0048193 "Golgi vesicle transport" evidence=RCA]
InterPro:IPR005024 Pfam:PF03357 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0015031 GO:GO:0005771 GO:GO:0000815
eggNOG:COG5491 KO:K12191 OMA:MEWLFGK EMBL:AC006420 EMBL:AY090953
EMBL:AY088685 EMBL:AJ628449 EMBL:AJ628450 EMBL:AJ628451
EMBL:AJ628452 EMBL:AJ628453 EMBL:AJ628454 EMBL:AJ628455
EMBL:AJ628456 EMBL:AJ628457 EMBL:AJ628458 EMBL:AJ628459
EMBL:AJ628460 EMBL:AJ628461 EMBL:AJ628462 EMBL:AJ628463
EMBL:AJ628464 EMBL:AJ628465 EMBL:AJ628466 EMBL:AJ628467
EMBL:AJ628468 EMBL:AJ628469 EMBL:AJ628470 EMBL:AJ628471
EMBL:AJ628472 EMBL:AJ628473 EMBL:AJ628474 EMBL:AJ628475
EMBL:AJ628476 EMBL:AJ628477 EMBL:AJ628478 EMBL:AJ628479
EMBL:AJ628480 EMBL:AJ628481 EMBL:AJ628482 EMBL:AJ628483
EMBL:AJ628484 EMBL:AJ628485 EMBL:AJ628486 EMBL:AJ628487
EMBL:AJ628488 EMBL:AJ628489 EMBL:AJ628490 EMBL:AJ628491
EMBL:AJ628492 EMBL:AJ628493 EMBL:AJ628494 EMBL:AJ628495
EMBL:AJ628496 EMBL:AJ628497 EMBL:AJ628498 EMBL:AJ628499
EMBL:AJ628500 EMBL:AJ628501 EMBL:AJ628502 EMBL:AJ628503
EMBL:AJ628504 EMBL:AJ628505 EMBL:AJ628506 EMBL:AJ628507
EMBL:AJ628508 EMBL:AJ628509 EMBL:AJ628510 EMBL:AJ628511
EMBL:AJ628512 EMBL:AJ628513 EMBL:AJ628514 EMBL:AJ628515
EMBL:AJ628516 EMBL:AJ628517 EMBL:AJ628518 EMBL:AJ628519
EMBL:AJ628520 EMBL:AJ628521 EMBL:AJ628522 EMBL:AJ628523
EMBL:AJ628524 EMBL:AJ628525 EMBL:AJ628526 EMBL:AJ628527
EMBL:AJ628528 EMBL:AJ628529 EMBL:AJ628530 EMBL:AJ628531
EMBL:AJ628532 EMBL:AJ628533 EMBL:AJ628534 EMBL:AJ628535
EMBL:AJ628536 EMBL:AJ628537 EMBL:AJ628538 EMBL:AJ628539
EMBL:AJ628540 EMBL:AJ628541 EMBL:AJ628542 EMBL:AJ628543
EMBL:AJ628544 EMBL:AJ628545 EMBL:AJ628546 IPI:IPI00528753
PIR:D84478 RefSeq:NP_565336.1 UniGene:At.20774
ProteinModelPortal:Q9SKI2 SMR:Q9SKI2 IntAct:Q9SKI2 STRING:Q9SKI2
PaxDb:Q9SKI2 PRIDE:Q9SKI2 EnsemblPlants:AT2G06530.1 GeneID:815211
KEGG:ath:AT2G06530 TAIR:At2g06530 InParanoid:Q9SKI2
PhylomeDB:Q9SKI2 ProtClustDB:CLSN2688018 Genevestigator:Q9SKI2
Uniprot:Q9SKI2
Length = 225
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 79/222 (35%), Positives = 117/222 (52%)
Query: 1 MN-IFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATK 59
MN IF K+ P E LRE+KR + + R +E+E LQ +EKKL+ EIK+TAK G GA K
Sbjct: 2 MNSIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVK 61
Query: 60 ILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPA 119
++A+ LIR R QI ++Q++G++ Q + + ++ QM
Sbjct: 62 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 121
Query: 120 KQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLS 179
K+M+EF++Q+ +M+M +E+M D I QVLDEIG+D+ +L
Sbjct: 122 SLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELV 181
Query: 180 AAPKGKIA---SKN-------TEDASSSGID-ELEKRLAALR 210
AP G +A +KN T S GID +L+ RL LR
Sbjct: 182 NAPSGAVAVPAAKNKVVQAEATGAEDSGGIDSDLQARLDNLR 223
>UNIPROTKB|F1NR65 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005739 GO:GO:0005634 GO:GO:0015031
GeneTree:ENSGT00550000074737 OMA:DPQKTLK IPI:IPI00591923
EMBL:AADN02042324 Ensembl:ENSGALT00000024990 Uniprot:F1NR65
Length = 214
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 64/210 (30%), Positives = 119/210 (56%)
Query: 2 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKIL 61
++F KK + ++E RE++ R + ++ AL+++EK+L EIK+ AKTGN+ A K+L
Sbjct: 3 SLFKKK-TVDDIIKEQNRELRGTQRTITRDRAALEKQEKQLELEIKKMAKTGNKEACKVL 61
Query: 62 ARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQ 121
A+QL++LR+Q +++ ++T T+ M++ + +M+P K
Sbjct: 62 AKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKT 121
Query: 122 AKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAA 181
+ M+ FQK++ +M+MT EM++DT+ QVLDEIG++++ +++ A
Sbjct: 122 LQTMQNFQKENMKMEMTEEMINDTLDDIFDASDEEEESQDIVNQVLDEIGIEISGKMAKA 181
Query: 182 PKGK--IASKNTEDASSSGIDELEKRLAAL 209
P + S +T AS+ +E+E++L AL
Sbjct: 182 PSAARGLPSASTSKASTISDEEIERQLKAL 211
>UNIPROTKB|Q5F3A2 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
CTD:25978 eggNOG:NOG268821 HOVERGEN:HBG102628 KO:K12192
OrthoDB:EOG469QW1 EMBL:AJ851748 IPI:IPI00591923
RefSeq:NP_001025963.1 UniGene:Gga.9706 ProteinModelPortal:Q5F3A2
STRING:Q5F3A2 GeneID:418461 KEGG:gga:418461 InParanoid:Q5F3A2
NextBio:20821640 Uniprot:Q5F3A2
Length = 214
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 63/210 (30%), Positives = 119/210 (56%)
Query: 2 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKIL 61
++F KK + ++E RE++ R + ++ AL+++E++L EIK+ AKTGN+ A K+L
Sbjct: 3 SLFKKK-TVDDIIKEQNRELRGTQRTITRDRAALEKQERQLELEIKKMAKTGNKEACKVL 61
Query: 62 ARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQ 121
A+QL++LR+Q +++ ++T T+ M++ + +M+P K
Sbjct: 62 AKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKT 121
Query: 122 AKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAA 181
+ M+ FQK++ +M+MT EM++DT+ QVLDEIG++++ +++ A
Sbjct: 122 LQTMQNFQKENMKMEMTEEMINDTLDDIFDASDEEEESQDIVNQVLDEIGIEISGKMAKA 181
Query: 182 PKGK--IASKNTEDASSSGIDELEKRLAAL 209
P + S +T AS+ +E+E++L AL
Sbjct: 182 PSAARGLPSASTSKASTISDEEIERQLKAL 211
>ZFIN|ZDB-GENE-040426-2539 [details] [associations]
symbol:chmp2bb "chromatin modifying protein 2Bb"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-2539
GO:GO:0015031 GeneTree:ENSGT00550000074737 EMBL:CR762462
IPI:IPI00493945 Ensembl:ENSDART00000125682 ArrayExpress:F1QLN0
Bgee:F1QLN0 Uniprot:F1QLN0
Length = 263
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 64/210 (30%), Positives = 118/210 (56%)
Query: 2 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKIL 61
++F KK + ++E +E++ R + ++ AL+++EK+L EIK+ AKTGN A K+L
Sbjct: 52 SLFKKK-TVDDVIKEQNKELRGTQRQIARDRTALEKQEKQLEMEIKKMAKTGNRDACKVL 110
Query: 62 ARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQ 121
A+QL+++R+Q +++ ++T T+ M++ + +M+P K
Sbjct: 111 AKQLVQVRKQKTRTYAVSSKVTSMSTQTKLMNSQMKMAGAMATTTKTMQAVNKKMDPKKT 170
Query: 122 AKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAA 181
+ ++ FQK++A+MDMT EMM+DT+ QVLDEIG++++ +++ A
Sbjct: 171 MQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEEESQDIVNQVLDEIGIEISGKMAHA 230
Query: 182 PKGKIASKNTEDASSSGI-DE-LEKRLAAL 209
P + + A + GI DE +E++L AL
Sbjct: 231 PSAARKTPSAATAKADGISDEDIERQLKAL 260
>DICTYBASE|DDB_G0292400 [details] [associations]
symbol:vps2B "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0010008
"endosome membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0292400 GenomeReviews:CM000155_GR GO:GO:0015031
GO:GO:0010008 EMBL:AAFI02000190 eggNOG:COG5491 KO:K12191
OMA:MEWLFGK RefSeq:XP_629585.1 ProteinModelPortal:Q54DB1
STRING:Q54DB1 EnsemblProtists:DDB0234176 GeneID:8628645
KEGG:ddi:DDB_G0292400 ProtClustDB:CLSZ2429397 Uniprot:Q54DB1
Length = 198
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 66/193 (34%), Positives = 104/193 (53%)
Query: 1 MNIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKI 60
M +F K+ PKE LRE++R + + R +++E ALQ +EKK++ +IK+ AK G + KI
Sbjct: 1 MFLFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSAKI 60
Query: 61 LARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAK 120
+A+ L+R R I + Q++ ++ Q + + ++ QM +
Sbjct: 61 MAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQMNLPQ 120
Query: 121 QAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSA 180
K+M EF++QS +MDM EMM+DT+ QVLDEIG+D+ASQL
Sbjct: 121 FTKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEEEQSQEILNQVLDEIGIDLASQLVD 180
Query: 181 APK--G-KIASKN 190
AP G +ASK+
Sbjct: 181 APTTVGTSVASKH 193
>UNIPROTKB|Q9UQN3 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9606 "Homo sapiens" [GO:0008219 "cell death" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IPI] [GO:0005829 "cytosol" evidence=TAS]
[GO:0016044 "cellular membrane organization" evidence=TAS]
[GO:0016197 "endosomal transport" evidence=TAS] [GO:0005622
"intracellular" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0031902
GO:GO:0015031 GO:GO:0008219 GO:GO:0016197 Orphanet:803
GO:GO:0016044 HOGENOM:HOG000177218 CTD:25978 eggNOG:NOG268821
HOVERGEN:HBG102628 KO:K12192 OMA:DPQKTLK EMBL:AF151842
EMBL:AL080122 EMBL:AK296072 EMBL:CR533456 EMBL:AK222654
EMBL:AC123511 EMBL:AC130885 EMBL:BC001553 IPI:IPI00550181
PIR:T12468 RefSeq:NP_001231573.1 RefSeq:NP_054762.2
UniGene:Hs.476930 PDB:2JQK PDBsum:2JQK ProteinModelPortal:Q9UQN3
SMR:Q9UQN3 IntAct:Q9UQN3 MINT:MINT-1430090 STRING:Q9UQN3
PhosphoSite:Q9UQN3 DMDM:73917746 PaxDb:Q9UQN3 PRIDE:Q9UQN3
DNASU:25978 Ensembl:ENST00000263780 Ensembl:ENST00000471660
GeneID:25978 KEGG:hsa:25978 UCSC:uc003dqp.4 GeneCards:GC03P087360
HGNC:HGNC:24537 HPA:HPA035069 MIM:600795 MIM:609512 MIM:614696
neXtProt:NX_Q9UQN3 Orphanet:275864 PharmGKB:PA142672112
InParanoid:Q9UQN3 PhylomeDB:Q9UQN3 ChiTaRS:CHMP2B
EvolutionaryTrace:Q9UQN3 GenomeRNAi:25978 NextBio:47630
ArrayExpress:Q9UQN3 Bgee:Q9UQN3 CleanEx:HS_CHMP2B
Genevestigator:Q9UQN3 GermOnline:ENSG00000083937 Uniprot:Q9UQN3
Length = 213
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 63/210 (30%), Positives = 117/210 (55%)
Query: 2 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKIL 61
++F KK + ++E RE++ R + ++ AL+++EK+L EIK+ AK GN+ A K+L
Sbjct: 3 SLFKKK-TVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVL 61
Query: 62 ARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQ 121
A+QL+ LR+Q +++ ++T T+ M++ + +M+P K
Sbjct: 62 AKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKT 121
Query: 122 AKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAA 181
+ M+ FQK++ +M+MT EM++DT+ QVLDEIG++++ +++ A
Sbjct: 122 LQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKA 181
Query: 182 PKG--KIASKNTEDASSSGIDELEKRLAAL 209
P + S +T A+ S +E+E++L AL
Sbjct: 182 PSAARSLPSASTSKATISD-EEIERQLKAL 210
>UNIPROTKB|E2R417 [details] [associations]
symbol:CHMP2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0005739
GO:GO:0005634 GO:GO:0015031 GeneTree:ENSGT00550000074737 CTD:25978
KO:K12192 OMA:DPQKTLK EMBL:AAEX03016386 EMBL:AAEX03016387
RefSeq:XP_544799.3 ProteinModelPortal:E2R417 SMR:E2R417
Ensembl:ENSCAFT00000012434 GeneID:487675 KEGG:cfa:487675
NextBio:20861232 Uniprot:E2R417
Length = 213
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 62/210 (29%), Positives = 117/210 (55%)
Query: 2 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKIL 61
++F KK + ++E RE++ R + ++ AL+++EK+L EIK+ AK GN+ A ++L
Sbjct: 3 SLFKKK-TVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVL 61
Query: 62 ARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQ 121
A+QL+ LR+Q +++ ++T T+ M++ + +M+P K
Sbjct: 62 AKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKT 121
Query: 122 AKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAA 181
+ M+ FQK++ +M+MT EM++DT+ QVLDEIG++++ +++ A
Sbjct: 122 LQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKA 181
Query: 182 PKG--KIASKNTEDASSSGIDELEKRLAAL 209
P + S +T A+ S +E+E++L AL
Sbjct: 182 PSAARSLPSASTSKATISD-EEIERQLKAL 210
>UNIPROTKB|F2Z5Q1 [details] [associations]
symbol:CHMP2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0005739 GO:GO:0005634
GO:GO:0015031 GeneTree:ENSGT00550000074737 OMA:DPQKTLK
EMBL:CU633644 ProteinModelPortal:F2Z5Q1 SMR:F2Z5Q1
Ensembl:ENSSSCT00000013128 Uniprot:F2Z5Q1
Length = 213
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 62/210 (29%), Positives = 117/210 (55%)
Query: 2 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKIL 61
++F KK + ++E RE++ R + ++ AL+++EK+L EIK+ AK GN+ A ++L
Sbjct: 3 SLFKKK-TVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVL 61
Query: 62 ARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQ 121
A+QL+ LR+Q +++ ++T T+ M++ + +M+P K
Sbjct: 62 AKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKT 121
Query: 122 AKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAA 181
+ M+ FQK++ +M+MT EM++DT+ QVLDEIG++++ +++ A
Sbjct: 122 LQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKA 181
Query: 182 PKG--KIASKNTEDASSSGIDELEKRLAAL 209
P + S +T A+ S +E+E++L AL
Sbjct: 182 PSAARSLPSASTSKATISD-EEIERQLKAL 210
>MGI|MGI:1916192 [details] [associations]
symbol:Chmp2b "charged multivesicular body protein 2B"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=ISO] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1916192 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 CTD:25978 eggNOG:NOG268821
HOVERGEN:HBG102628 KO:K12192 OMA:DPQKTLK OrthoDB:EOG469QW1
ChiTaRS:CHMP2B EMBL:AK004506 EMBL:AK084111 EMBL:BC042626
EMBL:BC055809 IPI:IPI00222386 RefSeq:NP_081155.1 UniGene:Mm.432944
ProteinModelPortal:Q8BJF9 SMR:Q8BJF9 STRING:Q8BJF9
PhosphoSite:Q8BJF9 PaxDb:Q8BJF9 PRIDE:Q8BJF9
Ensembl:ENSMUST00000004965 GeneID:68942 KEGG:mmu:68942
UCSC:uc007zqj.1 InParanoid:Q8BJF9 NextBio:328237 Bgee:Q8BJF9
CleanEx:MM_CHMP2B Genevestigator:Q8BJF9
GermOnline:ENSMUSG00000004843 Uniprot:Q8BJF9
Length = 213
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 62/210 (29%), Positives = 117/210 (55%)
Query: 2 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKIL 61
++F KK + ++E RE++ R + ++ AL+++EK+L EIK+ AK GN+ A ++L
Sbjct: 3 SLFKKK-TVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVL 61
Query: 62 ARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQ 121
A+QL+ LR+Q +++ ++T T+ M++ + +M+P K
Sbjct: 62 AKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKT 121
Query: 122 AKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAA 181
+ M+ FQK++ +M+MT EM++DT+ QVLDEIG++++ +++ A
Sbjct: 122 LQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKA 181
Query: 182 PKG--KIASKNTEDASSSGIDELEKRLAAL 209
P + S +T A+ S +E+E++L AL
Sbjct: 182 PSAARSLPSASTSKATISD-EEIERQLKAL 210
>UNIPROTKB|Q3SX42 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 EMBL:BC104514 IPI:IPI00696266
RefSeq:NP_001030549.1 UniGene:Bt.19768 ProteinModelPortal:Q3SX42
STRING:Q3SX42 Ensembl:ENSBTAT00000010436 GeneID:615954
KEGG:bta:615954 CTD:25978 eggNOG:NOG268821 HOVERGEN:HBG102628
InParanoid:Q3SX42 KO:K12192 OMA:DPQKTLK OrthoDB:EOG469QW1
NextBio:20899880 Uniprot:Q3SX42
Length = 213
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 61/210 (29%), Positives = 117/210 (55%)
Query: 2 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKIL 61
++F KK + ++E RE++ R + ++ AL+++EK+L EIK+ AK GN+ A ++L
Sbjct: 3 SLFKKK-TVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVL 61
Query: 62 ARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQ 121
A+QL+ LR+Q +++ ++T T+ M++ + +M+P K
Sbjct: 62 AKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKT 121
Query: 122 AKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAA 181
+ M+ FQK++ +M+MT EM++DT+ QVLDEIG++++ +++ A
Sbjct: 122 LQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKA 181
Query: 182 PKG--KIASKNTEDASSSGIDELEKRLAAL 209
P + S +T ++ S +E+E++L AL
Sbjct: 182 PSAARSLPSASTSKSTISD-EEIERQLKAL 210
>WB|WBGene00007216 [details] [associations]
symbol:C01A2.4 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 eggNOG:COG5491 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 KO:K12192 EMBL:Z81029 PIR:T18795
RefSeq:NP_493357.2 ProteinModelPortal:O02208 SMR:O02208
IntAct:O02208 STRING:O02208 PaxDb:O02208 EnsemblMetazoa:C01A2.4.1
EnsemblMetazoa:C01A2.4.2 GeneID:182050 KEGG:cel:CELE_C01A2.4
UCSC:C01A2.4 CTD:182050 WormBase:C01A2.4 InParanoid:O02208
OMA:EVERNRT NextBio:916198 Uniprot:O02208
Length = 207
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 72/211 (34%), Positives = 108/211 (51%)
Query: 1 MNIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKI 60
MNIFSK P+PKE R +KRE++ R +E + + + EK+L EIK+ A G+ A +
Sbjct: 1 MNIFSK-PDPKELERANKRELRKTNRDLESDRRQMDRREKELEQEIKKLAAKGHNDAARH 59
Query: 61 LARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAK 120
LA+QL++LR Q G A+I G+ M + + + QM K
Sbjct: 60 LAKQLVQLRNQKTKSIGMSARISGVQAQNSHMQSMAKMGSAMGTTVKTMKAMNAQMPLEK 119
Query: 121 QAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSA 180
A MREFQ +M +T EMM+DT+ QVLDEIG+++ S+L+
Sbjct: 120 VAANMREFQMAQEKMGLTEEMMNDTLDSILDAPGDADEQDAIVNQVLDEIGIEMNSKLAN 179
Query: 181 APKGKIASKNTEDASSSGIDELEKRLAALRN 211
P + +K + A + D+LE +LA LR+
Sbjct: 180 VPA--LPTKVSSTAPAD-FDDLEAQLARLRS 207
>FB|FBgn0035589 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:7227 "Drosophila melanogaster" [GO:0015031 "protein
transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
EMBL:AE014296 GO:GO:0015031 GeneTree:ENSGT00550000074737 CTD:25978
eggNOG:NOG268821 KO:K12192 OMA:DPQKTLK EMBL:AY061433
RefSeq:NP_647947.1 UniGene:Dm.850 SMR:Q9VRJ5 STRING:Q9VRJ5
EnsemblMetazoa:FBtr0077166 GeneID:38599 KEGG:dme:Dmel_CG4618
UCSC:CG4618-RA FlyBase:FBgn0035589 InParanoid:Q9VRJ5
OrthoDB:EOG4MPG6C GenomeRNAi:38599 NextBio:809457 Uniprot:Q9VRJ5
Length = 212
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 64/210 (30%), Positives = 110/210 (52%)
Query: 2 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKIL 61
NIF KKP KE RE+ R ++ ATR +E+E +++EE+KL EI+R A GN A +IL
Sbjct: 4 NIFGKKPTVKEQQRENDRSLRKATRDIERERRKMEEEERKLELEIRRNAAAGNNDACRIL 63
Query: 62 ARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQ 121
A+QL+ +R+Q + + +I+ I + M A+ ++ M P
Sbjct: 64 AKQLVEIRKQKSRTYAAAGKIQSIGYQNKNMGANIALSEAMGTTAKTMGEMNKVMRPEAI 123
Query: 122 AKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAA 181
+ +R+FQ + +M+MT EM++DT+ +VLDEIG++++ ++S+
Sbjct: 124 GETVRQFQAANMKMEMTDEMINDTLDDMLNESGDEEESNAVVNKVLDEIGIEISGKMSSI 183
Query: 182 PKGKIASKNTEDASSSGIDELEKRLAALRN 211
P S + E + ++ +LA LR+
Sbjct: 184 PA--TGSSDFETSGKRTEKDIADQLAKLRS 211
>ZFIN|ZDB-GENE-040426-2922 [details] [associations]
symbol:bc2 "putative breast adenocarcinoma marker"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-040426-2922 GO:GO:0031902 GO:GO:0015031
eggNOG:COG5491 HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191
OrthoDB:EOG4HMJBJ EMBL:BC045320 IPI:IPI00492134 RefSeq:NP_998682.1
UniGene:Dr.75361 ProteinModelPortal:Q7ZW25 STRING:Q7ZW25
PRIDE:Q7ZW25 GeneID:798901 KEGG:dre:798901 InParanoid:Q7ZW25
NextBio:20933600 ArrayExpress:Q7ZW25 Uniprot:Q7ZW25
Length = 220
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 67/216 (31%), Positives = 115/216 (53%)
Query: 2 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKIL 61
++F ++ P+E LR+++R + A R +++E L+Q+EKK++A+IK+ AK G A KI+
Sbjct: 3 SLFGRRKTPEEMLRQNQRALNRAMRDLDRERQRLEQQEKKIIADIKKMAKQGQMDAVKIM 62
Query: 62 ARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQ 121
A+ L+R R+ + RA I+ ++ Q + +++S+ Q++ +
Sbjct: 63 AKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQI 122
Query: 122 AKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAA 181
K+M EF++QS MDM EMM+D I QVLDE+G+ ++ +LS
Sbjct: 123 QKIMMEFERQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLSDELSNL 182
Query: 182 PK--GKI---ASKNTEDASS-SGID-ELEKRLAALR 210
P G + A K E + + D +LE+RL LR
Sbjct: 183 PATGGSLSVAAGKKAEPQPTLADADADLEERLNNLR 218
>UNIPROTKB|E2RIU2 [details] [associations]
symbol:CHMP2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0015031 CTD:27243 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 EMBL:AAEX03000690 RefSeq:XP_850536.1
ProteinModelPortal:E2RIU2 Ensembl:ENSCAFT00000003684 GeneID:476364
KEGG:cfa:476364 NextBio:20852037 Uniprot:E2RIU2
Length = 222
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 65/217 (29%), Positives = 115/217 (52%)
Query: 3 IFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILA 62
+F ++ P+E LR+++R + A R +++E L+ +EKK++A+IK+ AK G A +I+A
Sbjct: 4 LFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMA 63
Query: 63 RQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQA 122
+ L+R R+ + RA I+ ++ Q + +++S+ Q++ +
Sbjct: 64 KDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQ 123
Query: 123 KVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 182
K+M EF++Q+ MDM EMM+D I QVLDE+G+ + +LS P
Sbjct: 124 KIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLP 183
Query: 183 K--GKIA----SKNTEDASSSGID---ELEKRLAALR 210
G ++ K E A+S+ +D +LE+RL LR
Sbjct: 184 STGGSLSVAASGKKAEAAASALVDADADLEERLKNLR 220
>UNIPROTKB|Q3T0U5 [details] [associations]
symbol:CHMP2A "Chromatin modifying protein 2A" species:9913
"Bos taurus" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0015031 eggNOG:COG5491 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
OMA:MEWLFGK GeneTree:ENSGT00550000074737 EMBL:DAAA02047921
EMBL:BC102258 IPI:IPI00705335 RefSeq:NP_001029722.1 UniGene:Bt.5624
STRING:Q3T0U5 Ensembl:ENSBTAT00000018429 GeneID:523847
KEGG:bta:523847 InParanoid:Q3T0U5 NextBio:20873841 Uniprot:Q3T0U5
Length = 222
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 64/217 (29%), Positives = 114/217 (52%)
Query: 3 IFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILA 62
+F ++ P+E LR+++R + A R +++E L+ +EKK++A+IK+ AK G A +I+A
Sbjct: 4 LFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMA 63
Query: 63 RQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQA 122
+ L+R R+ + RA I+ ++ Q + +++S+ Q++ +
Sbjct: 64 KDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQ 123
Query: 123 KVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 182
K+M EF++Q+ MDM EMM+D I QVLDE+G+ + +LS P
Sbjct: 124 KIMMEFERQAEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVAQVLDELGLSLTDELSNLP 183
Query: 183 K--GKIA----SKNTEDASSSGID---ELEKRLAALR 210
G ++ K E +S+ +D +LE+RL LR
Sbjct: 184 STGGSLSVAAGGKKAEATASALVDADADLEERLKNLR 220
>UNIPROTKB|O43633 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 GO:GO:0016197 GO:GO:0016044
EMBL:CH471135 eggNOG:COG5491 CTD:27243 HOGENOM:HOG000177218
HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ EMBL:AF042384
EMBL:AJ277113 EMBL:AY364248 EMBL:BT007298 EMBL:CR457002
EMBL:AK311974 EMBL:BC002502 IPI:IPI00004416 RefSeq:NP_055268.1
RefSeq:NP_940818.1 UniGene:Hs.12107 ProteinModelPortal:O43633
SMR:O43633 DIP:DIP-48533N IntAct:O43633 MINT:MINT-5005843
STRING:O43633 PhosphoSite:O43633 OGP:O43633 PaxDb:O43633
PeptideAtlas:O43633 PRIDE:O43633 DNASU:27243
Ensembl:ENST00000312547 GeneID:27243 KEGG:hsa:27243 UCSC:uc002qti.3
GeneCards:GC19M059062 HGNC:HGNC:30216 HPA:HPA041153 HPA:HPA042031
MIM:610893 neXtProt:NX_O43633 PharmGKB:PA142672111
InParanoid:O43633 OMA:MEWLFGK PhylomeDB:O43633 ChiTaRS:CHMP2A
GenomeRNAi:27243 NextBio:50143 Bgee:O43633 CleanEx:HS_CHMP2A
Genevestigator:O43633 GermOnline:ENSG00000130724 Uniprot:O43633
Length = 222
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 65/217 (29%), Positives = 114/217 (52%)
Query: 3 IFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILA 62
+F ++ P+E LR+++R + A R +++E L+ +EKK++A+IK+ AK G A +I+A
Sbjct: 4 LFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMA 63
Query: 63 RQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQA 122
+ L+R R+ + RA I+ ++ Q + +++S+ Q++ +
Sbjct: 64 KDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQ 123
Query: 123 KVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 182
K+M EF++Q+ MDM EMM+D I QVLDE+G+ + +LS P
Sbjct: 124 KIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLP 183
Query: 183 K--GKIA----SKNTEDASSSGID---ELEKRLAALR 210
G ++ K E A+S+ D +LE+RL LR
Sbjct: 184 STGGSLSVAAGGKKAEAAASALADADADLEERLKNLR 220
>UNIPROTKB|C9J0A7 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
HOGENOM:HOG000177218 EMBL:AC123511 EMBL:AC130885 HGNC:HGNC:24537
ChiTaRS:CHMP2B IPI:IPI00947040 ProteinModelPortal:C9J0A7
STRING:C9J0A7 PRIDE:C9J0A7 Ensembl:ENST00000494980
ArrayExpress:C9J0A7 Bgee:C9J0A7 Uniprot:C9J0A7
Length = 183
Score = 148 (57.2 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 32/97 (32%), Positives = 57/97 (58%)
Query: 115 QMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDV 174
+M+P K + M+ FQK++ +M+MT EM++DT+ QVLDEIG+++
Sbjct: 85 KMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEI 144
Query: 175 ASQLSAAPKG--KIASKNTEDASSSGIDELEKRLAAL 209
+ +++ AP + S +T A+ S +E+E++L AL
Sbjct: 145 SGKMAKAPSAARSLPSASTSKATISD-EEIERQLKAL 180
Score = 139 (54.0 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 28/70 (40%), Positives = 48/70 (68%)
Query: 2 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKIL 61
++F KK + ++E RE++ R + ++ AL+++EK+L EIK+ AK GN+ A K+L
Sbjct: 3 SLFKKK-TVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVL 61
Query: 62 ARQLIRLRQQ 71
A+QL+ LR+Q
Sbjct: 62 AKQLVHLRKQ 71
Score = 36 (17.7 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 9/42 (21%), Positives = 21/42 (50%)
Query: 11 KEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKT 52
KEA + +++ H + + +Q KK+ + ++T +T
Sbjct: 55 KEACKVLAKQLVHLRKQKTRTFATMQAVNKKM--DPQKTLQT 94
>ZFIN|ZDB-GENE-070628-3 [details] [associations]
symbol:chmp2ba "chromatin modifying protein 2Ba"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-070628-3 GO:GO:0015031 eggNOG:COG5491
HOGENOM:HOG000177218 GeneTree:ENSGT00550000074737
HOVERGEN:HBG102628 KO:K12192 OrthoDB:EOG469QW1 EMBL:CR361551
IPI:IPI00509438 RefSeq:NP_001116769.1 UniGene:Dr.144266
Ensembl:ENSDART00000055866 GeneID:569532 KEGG:dre:569532
OMA:SADEEEC NextBio:20889725 Uniprot:B0UXH0
Length = 216
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 61/212 (28%), Positives = 115/212 (54%)
Query: 2 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKIL 61
++F KK + ++E +E++ R + ++ AL+++E+++ EIK+ AKTGN A KIL
Sbjct: 3 SLFKKK-TVDDIIKEQSKELRGTQRQITRDRAALERQERQMEMEIKKMAKTGNREACKIL 61
Query: 62 ARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQ 121
A+QL++LR+Q +++ ++T T+ M++ + +M+P K
Sbjct: 62 AKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQTVNKRMDPKKT 121
Query: 122 AKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAA 181
+ M++FQK++ +M MT +M++ T+ QVLDEIG++++ ++ A
Sbjct: 122 LQTMQDFQKENMKMGMTEDMLNSTLDEIFDESADEEECQDIVNQVLDEIGIEISGKMVRA 181
Query: 182 PK-GKI---ASKNTEDASSSGIDELEKRLAAL 209
P GKI AS ++ E+E++L AL
Sbjct: 182 PSTGKILPGASPAKSKTATISDAEIERQLKAL 213
>MGI|MGI:1916203 [details] [associations]
symbol:Chmp2a "charged multivesicular body protein 2A"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=ISO]
InterPro:IPR005024 Pfam:PF03357 MGI:MGI:1916203 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
OMA:MEWLFGK EMBL:AK005267 EMBL:BC012230 IPI:IPI00119020
RefSeq:NP_081161.1 UniGene:Mm.295670 ProteinModelPortal:Q9DB34
SMR:Q9DB34 STRING:Q9DB34 PaxDb:Q9DB34 PRIDE:Q9DB34
Ensembl:ENSMUST00000005711 GeneID:68953 KEGG:mmu:68953
UCSC:uc009ffc.2 GeneTree:ENSGT00550000074737 InParanoid:Q9DB34
NextBio:328271 Bgee:Q9DB34 CleanEx:MM_CHMP2A Genevestigator:Q9DB34
GermOnline:ENSMUSG00000033916 Uniprot:Q9DB34
Length = 222
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 64/217 (29%), Positives = 113/217 (52%)
Query: 3 IFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILA 62
+F ++ P+E LR+++R + A R +++E L+ +EKK++A+IK+ AK G A +I+A
Sbjct: 4 LFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMA 63
Query: 63 RQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQA 122
+ L+R R+ + RA I+ ++ Q + +++S+ Q++ +
Sbjct: 64 KDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQ 123
Query: 123 KVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 182
K+M EF++Q+ MDM EMM+D I QVLDE+G+ + +LS P
Sbjct: 124 KIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLP 183
Query: 183 K--GKIA----SKNTEDASSSGID---ELEKRLAALR 210
G ++ K E +S+ D +LE+RL LR
Sbjct: 184 STGGSLSVAAGGKKAEATASALADADADLEERLKNLR 220
>RGD|1305050 [details] [associations]
symbol:Chmp2a "charged multivesicular body protein 2A"
species:10116 "Rattus norvegicus" [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
InterPro:IPR005024 Pfam:PF03357 RGD:1305050 GO:GO:0005829
GO:GO:0015031 eggNOG:COG5491 CTD:27243 HOGENOM:HOG000177218
HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
GeneTree:ENSGT00550000074737 EMBL:BC167093 EMBL:CH474090
IPI:IPI00360875 RefSeq:NP_001102376.1 UniGene:Rn.203178 SMR:B2RZB5
STRING:B2RZB5 Ensembl:ENSRNOT00000030931 GeneID:365191
KEGG:rno:365191 UCSC:RGD:1305050 NextBio:686824
Genevestigator:B2RZB5 Uniprot:B2RZB5
Length = 222
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 64/217 (29%), Positives = 113/217 (52%)
Query: 3 IFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILA 62
+F ++ P+E LR+++R + A R +++E L+ +EKK++A+IK+ AK G A +I+A
Sbjct: 4 LFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMA 63
Query: 63 RQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQA 122
+ L+R R+ + RA I+ ++ Q + +++S+ Q++ +
Sbjct: 64 KDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQ 123
Query: 123 KVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 182
K+M EF++Q+ MDM EMM+D I QVLDE+G+ + +LS P
Sbjct: 124 KIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLP 183
Query: 183 K--GKIA----SKNTEDASSSGID---ELEKRLAALR 210
G ++ K E +S+ D +LE+RL LR
Sbjct: 184 STGGSLSVAAGGKKAEATASALADADADLEERLKNLR 220
>UNIPROTKB|Q5ZHN1 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0031902 GO:GO:0015031
eggNOG:COG5491 EMBL:AJ721103 IPI:IPI00594797 RefSeq:NP_001074361.1
UniGene:Gga.7026 ProteinModelPortal:Q5ZHN1 STRING:Q5ZHN1
PRIDE:Q5ZHN1 GeneID:776036 KEGG:gga:776036 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 InParanoid:Q5ZHN1 KO:K12191
OrthoDB:EOG4HMJBJ NextBio:20922661 Uniprot:Q5ZHN1
Length = 220
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 61/215 (28%), Positives = 114/215 (53%)
Query: 3 IFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILA 62
+F ++ P+E LR+++R + A R +++E L+ +EKK++ +IK+ AK G A KI+A
Sbjct: 4 LFGRRKTPEELLRQNQRALTRAMRELDRERQKLEAQEKKIIIDIKKMAKQGQMDAVKIMA 63
Query: 63 RQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQA 122
+ L+R R+ + RA ++ ++ Q + +++S+ Q++ +
Sbjct: 64 KDLVRTRRYVKKFITMRANVQAVSLKIQTLKSNNSMALAMKGVTKAMATMNRQLKLPQIQ 123
Query: 123 KVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 182
K+M EF+KQ+ MDM E+M+D I QVLDE+G+++ +L+ P
Sbjct: 124 KIMMEFEKQAGIMDMKEELMNDAIDDAMGDEDDEEESDAVVSQVLDELGLNLTDELATLP 183
Query: 183 K--GKIASKN--TEDASSSGID---ELEKRLAALR 210
G +A+ +A+++ D +LE+RL LR
Sbjct: 184 PPGGSLAAGEGRAAEAAAALADADADLEERLKNLR 218
>FB|FBgn0039402 [details] [associations]
symbol:vps2 "vps2" species:7227 "Drosophila melanogaster"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 EMBL:AE014297 GO:GO:0015031 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 FlyBase:FBgn0039402 EMBL:BT003747
RefSeq:NP_651455.1 UniGene:Dm.10330 SMR:Q9VBI3 IntAct:Q9VBI3
MINT:MINT-1674416 STRING:Q9VBI3 EnsemblMetazoa:FBtr0084967
GeneID:43164 KEGG:dme:Dmel_CG14542 UCSC:CG14542-RA CTD:43164
InParanoid:Q9VBI3 GenomeRNAi:43164 NextBio:832507 Uniprot:Q9VBI3
Length = 256
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 57/201 (28%), Positives = 102/201 (50%)
Query: 3 IFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILA 62
+F KK +P E LR+++R + A R +++E ++Q+EKK++A+IK+ AK G A KI+A
Sbjct: 4 LFGKKISPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKIIADIKKMAKEGQMDAVKIMA 63
Query: 63 RQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQA 122
+ L+R R+ +A I+ ++ Q + + +++ Q+ +
Sbjct: 64 KDLVRTRRYAKKFMLMKANIQAVSLKIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQIQ 123
Query: 123 KVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 182
K++++F+KQS MDM EM++D I QVLDE+G+ + QL P
Sbjct: 124 KILQDFEKQSEMMDMKEEMINDAIDDAMEDEGDEEETDAVVSQVLDELGLQLGEQLGDLP 183
Query: 183 KGKIASKNTEDASSSGIDELE 203
AS + A +G + +
Sbjct: 184 S---ASGSLSIAGGAGAQKAQ 201
>CGD|CAL0003689 [details] [associations]
symbol:VPS2 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0006623 "protein targeting to
vacuole" evidence=ISS] [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0045053 "protein retention in Golgi apparatus"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 CGD:CAL0003689 GO:GO:0006623
EMBL:AACQ01000063 EMBL:AACQ01000062 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 RefSeq:XP_716784.1
RefSeq:XP_716844.1 ProteinModelPortal:Q5A501 STRING:Q5A501
GeneID:3641513 GeneID:3641546 KEGG:cal:CaO19.8560
KEGG:cal:CaO19.945 Uniprot:Q5A501
Length = 235
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 59/202 (29%), Positives = 100/202 (49%)
Query: 4 FSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILAR 63
F KK P+E LR+++R ++ R + +EI LQQ+EKKL+++IK++AK+G + KI A+
Sbjct: 9 FGKKLTPQERLRKNQRALEKTQRELSREITKLQQQEKKLISDIKKSAKSGQISSAKIQAK 68
Query: 64 QLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAK 123
LIR + ++ + Q++ I+ Q++ ++ + M + ++
Sbjct: 69 DLIRTKSYVSKFTSMKTQLQAISLRIQSVRSNQQMAMSMRDATRVLGGMNRSMNLPQLSR 128
Query: 124 VMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQ----VLDEIGVDVASQLS 179
+ +EF K+S MD E M D I + VLDEIGVD+ + L
Sbjct: 129 IAQEFAKESDMMDQKQEFMDDAIDDAMAMDEDELGEEEQVDEILSKVLDEIGVDLNTTLK 188
Query: 180 AAPKGKIASKNTEDASSSGIDE 201
P G I + N E A + + E
Sbjct: 189 DTPTG-INAGNIEQADRARVAE 209
>UNIPROTKB|Q5A501 [details] [associations]
symbol:VPS2 "Putative uncharacterized protein DID4"
species:237561 "Candida albicans SC5314" [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006623 "protein targeting to vacuole"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0003689
GO:GO:0006623 EMBL:AACQ01000063 EMBL:AACQ01000062 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177218 KO:K12191 RefSeq:XP_716784.1
RefSeq:XP_716844.1 ProteinModelPortal:Q5A501 STRING:Q5A501
GeneID:3641513 GeneID:3641546 KEGG:cal:CaO19.8560
KEGG:cal:CaO19.945 Uniprot:Q5A501
Length = 235
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 59/202 (29%), Positives = 100/202 (49%)
Query: 4 FSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILAR 63
F KK P+E LR+++R ++ R + +EI LQQ+EKKL+++IK++AK+G + KI A+
Sbjct: 9 FGKKLTPQERLRKNQRALEKTQRELSREITKLQQQEKKLISDIKKSAKSGQISSAKIQAK 68
Query: 64 QLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAK 123
LIR + ++ + Q++ I+ Q++ ++ + M + ++
Sbjct: 69 DLIRTKSYVSKFTSMKTQLQAISLRIQSVRSNQQMAMSMRDATRVLGGMNRSMNLPQLSR 128
Query: 124 VMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQ----VLDEIGVDVASQLS 179
+ +EF K+S MD E M D I + VLDEIGVD+ + L
Sbjct: 129 IAQEFAKESDMMDQKQEFMDDAIDDAMAMDEDELGEEEQVDEILSKVLDEIGVDLNTTLK 188
Query: 180 AAPKGKIASKNTEDASSSGIDE 201
P G I + N E A + + E
Sbjct: 189 DTPTG-INAGNIEQADRARVAE 209
>ASPGD|ASPL0000001940 [details] [associations]
symbol:AN6898 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0045053 "protein retention in Golgi apparatus"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0000815
"ESCRT III complex" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0015031 EMBL:BN001301 GO:GO:0000815 OMA:MEWLFGK GO:GO:0070676
EnsemblFungi:CADANIAT00007700 Uniprot:C8V2X5
Length = 226
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 65/219 (29%), Positives = 103/219 (47%)
Query: 4 FSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILAR 63
F K+ P E LR+ +R + R +++E L+ +EKKL+ +IK++AK G GA KI A+
Sbjct: 8 FGKRMTPAERLRKHQRALDRTQRELDRERTKLENQEKKLIQDIKKSAKNGQIGACKIQAK 67
Query: 64 QLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQME-PAKQA 122
L+R R+ I R Q++ I+ Q + ++ + QM PA Q
Sbjct: 68 DLVRTRRYIQKFYQMRTQLQAISLRIQTVRSNEQMMQSMKGATMLLGSMNRQMNLPALQ- 126
Query: 123 KVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 182
++ EF++++ MD EMM D I +VLDEIGVD++ L P
Sbjct: 127 RIAMEFERENDIMDQRQEMMDDAIDEATGIEGEEEEGEDIVKEVLDEIGVDLSQALGETP 186
Query: 183 KG----KIASKNTEDASSSG-------IDELEKRLAALR 210
G ++ A +G D+L+ RL +LR
Sbjct: 187 SGIQKESVSEGRVAQAIGAGGAGGASDDDDLQARLDSLR 225
>SGD|S000001485 [details] [associations]
symbol:DID4 "Class E Vps protein of the ESCRT-III complex"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IC] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IMP]
[GO:0000815 "ESCRT III complex" evidence=IDA] [GO:0045324 "late
endosome to vacuole transport" evidence=IPI] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 SGD:S000001485 GO:GO:0015031
EMBL:BK006944 GO:GO:0045324 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 GO:GO:0043162 OrthoDB:EOG4WT0M1
GO:GO:0045053 EMBL:Z28002 PIR:S37812 RefSeq:NP_012924.2 PDB:2V6X
PDBsum:2V6X ProteinModelPortal:P36108 SMR:P36108 DIP:DIP-1916N
IntAct:P36108 MINT:MINT-404147 STRING:P36108 PaxDb:P36108
EnsemblFungi:YKL002W GeneID:853868 KEGG:sce:YKL002W CYGD:YKL002w
EvolutionaryTrace:P36108 NextBio:975133 Genevestigator:P36108
GermOnline:YKL002W GO:GO:0070676 Uniprot:P36108
Length = 232
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 57/200 (28%), Positives = 98/200 (49%)
Query: 3 IFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILA 62
+F K P+E L++++R ++ R +E+E L+ ++KKLV+EIK++AK G A K+ A
Sbjct: 7 VFGKNVTPQERLKKNQRALERTQRELEREKRKLELQDKKLVSEIKKSAKNGQVAAAKVQA 66
Query: 63 RQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQA 122
+ L+R R I +AQ++ I+ QA+ + + M +
Sbjct: 67 KDLVRTRNYIQKFDNMKAQLQAISLRIQAVRSSDQMTRSMSEATGLLAGMNRTMNLPQLQ 126
Query: 123 KVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXX-QVLDEIGVDVASQLSAA 181
++ EF+KQS M E M + I +VLDEIGVD+ SQL +
Sbjct: 127 RISMEFEKQSDLMGQRQEFMDEAIDNVMGDEVDEDEEADEIVNKVLDEIGVDLNSQLQST 186
Query: 182 PKGKIASKNTEDASSSGIDE 201
P+ +++ + ++ GI E
Sbjct: 187 PQNLVSNAPIAE-TAMGIPE 205
>WB|WBGene00012903 [details] [associations]
symbol:vps-2 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0009792 GO:GO:0015031 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 EMBL:AL110485 RefSeq:NP_496717.1
ProteinModelPortal:Q9U2F6 SMR:Q9U2F6 IntAct:Q9U2F6 STRING:Q9U2F6
PaxDb:Q9U2F6 EnsemblMetazoa:Y46G5A.12.1 EnsemblMetazoa:Y46G5A.12.2
EnsemblMetazoa:Y46G5A.12.3 GeneID:174908 KEGG:cel:CELE_Y46G5A.12
UCSC:Y46G5A.12.1 CTD:174908 WormBase:Y46G5A.12 InParanoid:Q9U2F6
NextBio:885996 Uniprot:Q9U2F6
Length = 237
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 48/180 (26%), Positives = 89/180 (49%)
Query: 3 IFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILA 62
+F ++ P E LR+++R + A R +++E ++ +EKK++A+IK AK + K++A
Sbjct: 4 LFGRRKTPAELLRQNQRALNKAIRELDRERARMEAQEKKVIADIKNMAKKNQMDSVKVMA 63
Query: 63 RQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQA 122
+ L+R R+ I +A I+ ++ Q + + ++ Q+ +
Sbjct: 64 KDLVRTRRYIKKFIVMKANIQAVSLKVQTLKSQDAMASAMKGVTKAMQSMNRQLNLPQIQ 123
Query: 123 KVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 182
K+M EF+KQS MDM E+M D I QVLDE+G+ + +++ P
Sbjct: 124 KIMMEFEKQSEIMDMKEEVMGDAIDDALGDAGDEEETDQIVNQVLDELGIQMGEEMAGLP 183
>POMBASE|SPAC4F8.01 [details] [associations]
symbol:did4 "ESCRT III complex subunit Did4" species:4896
"Schizosaccharomyces pombe" [GO:0000815 "ESCRT III complex"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006900 "membrane
budding" evidence=IC] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISO] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPAC4F8.01 EMBL:CU329670
GO:GO:0000815 GO:GO:0043328 eggNOG:COG5491 HOGENOM:HOG000177218
KO:K12191 OMA:MEWLFGK GO:GO:0006900 PIR:T38831 RefSeq:NP_593871.3
ProteinModelPortal:O14177 STRING:O14177 EnsemblFungi:SPAC4F8.01.1
GeneID:2543521 KEGG:spo:SPAC4F8.01 OrthoDB:EOG4WT0M1
NextBio:20804531 GO:GO:0045053 Uniprot:O14177
Length = 210
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 58/205 (28%), Positives = 97/205 (47%)
Query: 3 IFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILA 62
+F +P+E LR +R + A R +++E L Q E+ L+ EIK +AK GN GA +I A
Sbjct: 7 LFGGGKSPQEQLRAHQRSLGRAERELDRERTKLDQRERALIQEIKGSAKAGNTGAARIQA 66
Query: 63 RQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQA 122
R L+RLR + ++ Q++ I+ Q M + M A
Sbjct: 67 RDLMRLRNSRKKMMNAKTQLQAISLRLQTMRTSEQMMQSMRGATRLLTGMNKSMNIPAMA 126
Query: 123 KVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQL--SA 180
++ ++F++++ M+ EM+ + + +VLDEIGVD++ L +A
Sbjct: 127 RITQQFERENEIMEQRQEMIDENMDDALEEDDEEEADELVN-KVLDEIGVDLSQGLPDAA 185
Query: 181 APKGKIASKNTEDASSSGIDELEKR 205
G + TED + +DEL KR
Sbjct: 186 TQIGTVPELKTEDNLQARLDELAKR 210
>DICTYBASE|DDB_G0290087 [details] [associations]
symbol:vps2A "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0290087 GO:GO:0015031 GenomeReviews:CM000154_GR
GO:GO:0000815 eggNOG:COG5491 KO:K12191 EMBL:AAFI02000152
RefSeq:XP_635908.2 ProteinModelPortal:Q54GK9 STRING:Q54GK9
EnsemblProtists:DDB0234032 GeneID:8627474 KEGG:ddi:DDB_G0290087
OMA:QDMFEDD Uniprot:Q54GK9
Length = 206
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 54/211 (25%), Positives = 101/211 (47%)
Query: 1 MNIFS-KKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATK 59
M+ F K P++ L++SKRE+ R M++E+ L+ E++ + +IK+ AK G K
Sbjct: 1 MSFFGGNKKTPEQELKDSKRELSKGQREMDRELNRLKIVEQEYIGKIKQLAKAGRNDEAK 60
Query: 60 ILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPA 119
+A L++LR Q+ ++ ++ + ++T T + A+ ++ Q +
Sbjct: 61 RMANDLVKLRGQMERMRATKTTLSAVSTKTTTIKANQTMANAMASATKAMSTMNKQTDLV 120
Query: 120 KQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQL- 178
+ K M E++KQ+ +++MT EMM D +V+DE+ +D ++
Sbjct: 121 QLQKTMMEYEKQTQRVEMTEEMMQDMFEDDEVDEEADDILS----KVVDEVCLDNYQKMP 176
Query: 179 SAAPKGKIASKNTEDASSSGIDELEKRLAAL 209
S A K S T + +EL K L +L
Sbjct: 177 SVAQKDLPYSSKTSTFKTED-EELNKLLQSL 206
>TAIR|locus:2172686 [details] [associations]
symbol:VPS24.1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0006623 "protein targeting to vacuole" evidence=RCA]
InterPro:IPR005024 Pfam:PF03357 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177219 KO:K12193 EMBL:AB005243
EMBL:AY054614 EMBL:AY128742 EMBL:AF083749 EMBL:AK220831
IPI:IPI00546218 RefSeq:NP_197686.1 UniGene:At.8736
ProteinModelPortal:Q9FFB3 SMR:Q9FFB3 IntAct:Q9FFB3 STRING:Q9FFB3
PaxDb:Q9FFB3 PRIDE:Q9FFB3 EnsemblPlants:AT5G22950.1 GeneID:832359
KEGG:ath:AT5G22950 TAIR:At5g22950 InParanoid:Q9FFB3 OMA:MKIVNNL
PhylomeDB:Q9FFB3 ProtClustDB:CLSN2686097 Genevestigator:Q9FFB3
Uniprot:Q9FFB3
Length = 229
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 53/218 (24%), Positives = 101/218 (46%)
Query: 1 MNIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKI 60
MNI KP+PK+ LR+ +R+++ R +E++I +Q+EE+ + IK AK + + K
Sbjct: 5 MNIIKPKPDPKQLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMVSAKA 64
Query: 61 LARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAK 120
LA++++ R+ + L ++AQ+ I+ H A + M+ +
Sbjct: 65 LAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPQ 124
Query: 121 QAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSA 180
A M+EF K+ + + E +++ I +VL I + A++L
Sbjct: 125 MAATMQEFSKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETAAELPV 184
Query: 181 A--------PKGKIASKNTEDASSSGIDELEKRLAALR 210
A P K ++ E+A + G+D+ E+ L +R
Sbjct: 185 AVRKERIKVPAQKASTSREEEAVAEGVDD-EEELEEIR 221
>WB|WBGene00020866 [details] [associations]
symbol:T27F7.1 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0015031
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0019915
eggNOG:COG5491 GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
KO:K12193 OMA:MSKEMMK EMBL:FO081509 NextBio:881441
RefSeq:NP_494919.1 ProteinModelPortal:Q9GYK4 SMR:Q9GYK4
IntAct:Q9GYK4 STRING:Q9GYK4 PaxDb:Q9GYK4 EnsemblMetazoa:T27F7.1.1
EnsemblMetazoa:T27F7.1.2 EnsemblMetazoa:T27F7.1.3 GeneID:173863
KEGG:cel:CELE_T27F7.1 UCSC:T27F7.1.1 CTD:173863 WormBase:T27F7.1
InParanoid:Q9GYK4 Uniprot:Q9GYK4
Length = 208
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 41/146 (28%), Positives = 78/146 (53%)
Query: 1 MNIFSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKI 60
M +F KK +PKE +RE +R+M+ R +++++ ++Q+EE+K+ EIK AK G++ I
Sbjct: 1 MGLFGKKKDPKEEVRELQRKMRQEMRSLDRQVYSIQREEQKVTKEIKEAAKKGDKDVCLI 60
Query: 61 LARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAK 120
LA+ +I+ R+ I+ + S+AQI + Q A + ++ +
Sbjct: 61 LAKSMIQSRKAISKIHVSKAQINSVIMCMQEQLATIRMAGSLQKSTEVMKSMQQLVKVPE 120
Query: 121 QAKVMREFQKQSAQMDMTTEMMSDTI 146
K MRE + ++ + EM+ +T+
Sbjct: 121 IMKTMREMSAEMMKLGIIEEMIEETL 146
>DICTYBASE|DDB_G0284769 [details] [associations]
symbol:vps24 "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0284769 GenomeReviews:CM000153_GR EMBL:AAFI02000071
GO:GO:0015031 GO:GO:0000815 eggNOG:COG5491 KO:K12193 OMA:MSKEMMK
RefSeq:XP_638395.1 ProteinModelPortal:Q54P63 STRING:Q54P63
PRIDE:Q54P63 EnsemblProtists:DDB0234036 GeneID:8624764
KEGG:ddi:DDB_G0284769 InParanoid:Q54P63 ProtClustDB:CLSZ2437297
Uniprot:Q54P63
Length = 207
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 50/208 (24%), Positives = 93/208 (44%)
Query: 4 FSKKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILAR 63
F KKP P+E +++ KRE++ RG++ ++ A+ +EKK V IK K G++ + K LA+
Sbjct: 4 FLKKPTPEELVKKWKRELRREDRGLDTQLRAIDMQEKKTVRMIKERVKAGDQKSAKTLAK 63
Query: 64 QLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAK 123
+++ R+ + ++AQ+ ++ Q+ A + V ++ + K
Sbjct: 64 EIVNSRKAKERIYTAKAQMNSVSMQLQSNLAMTKVQGNLAKSTEIMKMMNDLIKLPELNK 123
Query: 124 VMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK 183
VM + + + EM+SD +++DEI V Q+S+AP
Sbjct: 124 VMMAMGSEMTKAGIMEEMISDVFDMQGEDLEEEAEMEVN--KIMDEILVS-GPQVSSAPL 180
Query: 184 GKIASKNTEDASSSGIDELEKRLAALRN 211
+ EL RL AL++
Sbjct: 181 ETHQQEEVVQEKQED-SELLDRLKALKS 207
>UNIPROTKB|I3LSS2 [details] [associations]
symbol:CHMP2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0015031 GeneTree:ENSGT00550000074737
Ensembl:ENSSSCT00000030728 OMA:FITMRAN Uniprot:I3LSS2
Length = 167
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 46/165 (27%), Positives = 80/165 (48%)
Query: 55 EGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXX 114
+ A +I+A+ L+R R+ + RA I+ ++ Q + +++S+
Sbjct: 1 QDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNR 60
Query: 115 QMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDV 174
Q++ + K+M EF++Q+ MDM EMM+D I QVLDE+G+ +
Sbjct: 61 QLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVAQVLDELGLSL 120
Query: 175 ASQLSAAPK--GKIA----SKNTEDASSSGID---ELEKRLAALR 210
+LS P G ++ K E A+S+ +D +LE+RL LR
Sbjct: 121 TDELSNLPSTGGSLSVAASGKKAEAAASALVDADADLEERLKNLR 165
>UNIPROTKB|Q7LBR1 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9606 "Homo sapiens" [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000910
"cytokinesis" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0051301 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 CTD:57132 HOVERGEN:HBG080200 KO:K12197 OMA:EHLFNLK
EMBL:AF306520 EMBL:AF281064 EMBL:BC065933 EMBL:BC012733
IPI:IPI00156984 RefSeq:NP_065145.2 UniGene:Hs.656244 PDB:3EAB
PDBsum:3EAB ProteinModelPortal:Q7LBR1 SMR:Q7LBR1 DIP:DIP-48534N
IntAct:Q7LBR1 MINT:MINT-6946813 PhosphoSite:Q7LBR1 DMDM:73917735
PeptideAtlas:Q7LBR1 PRIDE:Q7LBR1 DNASU:57132
Ensembl:ENST00000526991 GeneID:57132 KEGG:hsa:57132 UCSC:uc002kqe.3
GeneCards:GC18P011851 HGNC:HGNC:24287 MIM:606486 neXtProt:NX_Q7LBR1
PharmGKB:PA142672110 EvolutionaryTrace:Q7LBR1 GenomeRNAi:57132
NextBio:63047 ArrayExpress:Q7LBR1 Bgee:Q7LBR1 CleanEx:HS_C18orf2
CleanEx:HS_CHMP1B Genevestigator:Q7LBR1 Uniprot:Q7LBR1
Length = 199
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 48/191 (25%), Positives = 80/191 (41%)
Query: 21 MQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRA 80
++ A + + + +EEK A+IK+ + GN +I A IR + Q N A
Sbjct: 11 LKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSA 70
Query: 81 QIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTE 140
++ +A Q V M K + +M +F+ Q +D+ T+
Sbjct: 71 RVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQ 130
Query: 141 MMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGID 200
M DT+ ++ DE G+D+ +L P+G+ S T AS+ D
Sbjct: 131 QMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-D 186
Query: 201 ELEKRLAALRN 211
EL +RLA LR+
Sbjct: 187 ELSQRLARLRD 197
>MGI|MGI:1920159 [details] [associations]
symbol:Chmp1a "charged multivesicular body protein 1A"
species:10090 "Mus musculus" [GO:0000794 "condensed nuclear
chromosome" evidence=ISO] [GO:0000910 "cytokinesis" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005815 "microtubule organizing center" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=ISO] [GO:0012505 "endomembrane system"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0016363 "nuclear matrix" evidence=ISO]
[GO:0016458 "gene silencing" evidence=ISO] [GO:0019904 "protein
domain specific binding" evidence=ISO] [GO:0045014 "negative
regulation of transcription by glucose" evidence=ISO] [GO:0045749
"negative regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 MGI:MGI:1920159
GO:GO:0045892 GO:GO:0051301 GO:GO:0016192 GO:GO:0015031
GO:GO:0012505 GO:GO:0006351 GO:GO:0010008 GO:GO:0005815
GO:GO:0000794 GO:GO:0016363 GO:GO:0007076 GO:GO:0005769
GO:GO:0045749 GO:GO:0016458 GO:GO:0045014 eggNOG:COG5491
HOGENOM:HOG000241980 HOVERGEN:HBG080200 KO:K12197 OrthoDB:EOG4PVP0T
GeneTree:ENSGT00550000074957 CTD:5119 ChiTaRS:CHMP1A EMBL:AK046416
EMBL:AK159830 EMBL:BC010524 EMBL:BC023807 EMBL:BC036138
EMBL:BC036152 IPI:IPI00122318 RefSeq:NP_663581.1 UniGene:Mm.41596
ProteinModelPortal:Q921W0 STRING:Q921W0 PhosphoSite:Q921W0
PaxDb:Q921W0 PRIDE:Q921W0 DNASU:234852 Ensembl:ENSMUST00000000759
GeneID:234852 KEGG:mmu:234852 UCSC:uc009nuk.2 InParanoid:Q921W0
OMA:DKFEQQV NextBio:382397 Bgee:Q921W0 CleanEx:MM_CHMP1A
Genevestigator:Q921W0 GermOnline:ENSMUSG00000000743 Uniprot:Q921W0
Length = 196
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 45/192 (23%), Positives = 83/192 (43%)
Query: 20 EMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSR 79
+++ + +EK +++ K A++K+ + N ++ A IR + + N
Sbjct: 7 QLKFTAKQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMA 66
Query: 80 AQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTT 139
+++ +A+ Q V M+ K + VM F++Q +D+ T
Sbjct: 67 SRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSAMDLQKVSAVMDRFEQQVQNLDVHT 126
Query: 140 EMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI 199
+M D++ Q+ +E G++V QLS P+G AS E + S
Sbjct: 127 SVMEDSVSSATTLTTPQEQVDSLIVQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQE 184
Query: 200 DELEKRLAALRN 211
D+L +RLAALRN
Sbjct: 185 DQLSRRLAALRN 196
>RGD|1311083 [details] [associations]
symbol:Chmp1a "charged multivesicular body protein 1A"
species:10116 "Rattus norvegicus" [GO:0000794 "condensed nuclear
chromosome" evidence=IEA;ISO] [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0005769 "early endosome" evidence=IEA;ISO]
[GO:0005815 "microtubule organizing center" evidence=IEA;ISO]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA;ISO]
[GO:0012505 "endomembrane system" evidence=IEA;ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA;ISO] [GO:0016363 "nuclear matrix"
evidence=IEA;ISO] [GO:0016458 "gene silencing" evidence=IEA;ISO]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IEA;ISO] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR005024 Pfam:PF03357 RGD:1311083 GO:GO:0016192
GO:GO:0015031 GO:GO:0012505 GO:GO:0005815 GO:GO:0000794
GO:GO:0016363 GO:GO:0007076 GO:GO:0005769 GO:GO:0045749
GO:GO:0016458 GO:GO:0045014 KO:K12197 OrthoDB:EOG4PVP0T
GeneTree:ENSGT00550000074957 CTD:5119 IPI:IPI00360574
RefSeq:NP_001076782.1 UniGene:Rn.6239 ProteinModelPortal:D4AE79
PRIDE:D4AE79 Ensembl:ENSRNOT00000021483 GeneID:365024
KEGG:rno:365024 UCSC:RGD:1311083 NextBio:686501 Uniprot:D4AE79
Length = 196
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 45/192 (23%), Positives = 83/192 (43%)
Query: 20 EMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSR 79
+++ + +EK +++ K A++K+ + N ++ A IR + + N
Sbjct: 7 QLKFTAKQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMA 66
Query: 80 AQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTT 139
+++ +A+ Q V M+ K + VM F++Q +D+ T
Sbjct: 67 SRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSAMDLQKVSAVMDRFEQQVQNLDVHT 126
Query: 140 EMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI 199
+M D++ Q+ +E G++V QLS P+G AS E + S
Sbjct: 127 SVMEDSVSSATTLTTPQEQVDSLIVQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQE 184
Query: 200 DELEKRLAALRN 211
D+L +RLAALRN
Sbjct: 185 DQLSRRLAALRN 196
>RGD|1593500 [details] [associations]
symbol:Chmp1b "charged multivesicular body protein 1B"
species:10116 "Rattus norvegicus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] InterPro:IPR005024 Pfam:PF03357 RGD:1593500
GO:GO:0015031 eggNOG:COG5491 HOGENOM:HOG000241980
HOVERGEN:HBG080200 OrthoDB:EOG4PVP0T EMBL:BC168175 IPI:IPI00764309
UniGene:Rn.39132 STRING:B4F787 UCSC:RGD:1593500
Genevestigator:B4F787 Uniprot:B4F787
Length = 230
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 48/191 (25%), Positives = 80/191 (41%)
Query: 21 MQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRA 80
++ A + + + +EEK A+IK+ + GN +I A IR + Q N A
Sbjct: 42 LKFAAKELNRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSA 101
Query: 81 QIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTE 140
++ +A Q V M K + +M +F+ Q +D+ T+
Sbjct: 102 RVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQ 161
Query: 141 MMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGID 200
M DT+ ++ DE G+D+ +L P+G+ S T AS+ D
Sbjct: 162 QMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-D 217
Query: 201 ELEKRLAALRN 211
EL +RLA LR+
Sbjct: 218 ELSQRLARLRD 228
>UNIPROTKB|F1NPS5 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0015031 "protein transport" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0012505 "endomembrane system"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016458 "gene silencing" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IEA] [GO:0045014 "negative
regulation of transcription by glucose" evidence=IEA] [GO:0045749
"negative regulation of S phase of mitotic cell cycle"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0016192
GO:GO:0015031 GO:GO:0012505 GO:GO:0005815 GO:GO:0000794
GO:GO:0016363 GO:GO:0007076 GO:GO:0005769 GO:GO:0045749
GO:GO:0016458 GO:GO:0045014 GeneTree:ENSGT00550000074957
OMA:DKFEQQV EMBL:AADN02054137 EMBL:AADN02054138 IPI:IPI00639789
Ensembl:ENSGALT00000033674 ArrayExpress:F1NPS5 Uniprot:F1NPS5
Length = 204
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 44/199 (22%), Positives = 88/199 (44%)
Query: 13 ALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQI 72
+L ++ +++ + +EK +++ K A++K+ + N ++ A IR + +
Sbjct: 8 SLADTLFQLKFTAKQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEG 67
Query: 73 ANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQS 132
N +++ +A+ Q V M+ K + VM +F++Q
Sbjct: 68 LNWLRMASRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSSMDLQKVSAVMDKFEQQV 127
Query: 133 AQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTE 192
+D+ T +M D++ Q+ +E G+++ QL+ P+G AS E
Sbjct: 128 QNLDVHTSVMEDSMSSATTLTTPQEQVDSLIVQIAEENGLEIMDQLNQLPEG--ASAVGE 185
Query: 193 DASSSGIDELEKRLAALRN 211
+ S D+L +RLAALRN
Sbjct: 186 SSMRSQEDQLSRRLAALRN 204
>UNIPROTKB|F1NVQ6 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074957 IPI:IPI00582566 OMA:EHLFNLK
EMBL:AADN02013150 Ensembl:ENSGALT00000006500 Uniprot:F1NVQ6
Length = 199
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 48/191 (25%), Positives = 80/191 (41%)
Query: 21 MQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRA 80
++ A + + + +EEK A+IK+ + GN +I A IR + Q N A
Sbjct: 11 LKFAAKELNRNSKRCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAINFLRMSA 70
Query: 81 QIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTE 140
++ +A Q V M K + +M +F+ Q +D+ T+
Sbjct: 71 RVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQ 130
Query: 141 MMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGID 200
M DT+ ++ DE G+D+ +L P+G+ S T AS+ D
Sbjct: 131 QMEDTMSNTTTLTTPQNQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-D 186
Query: 201 ELEKRLAALRN 211
EL +RLA LR+
Sbjct: 187 ELSQRLARLRD 197
>UNIPROTKB|Q32KR9 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045749 "negative regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045014 "negative regulation of
transcription by glucose" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0016458 "gene silencing"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0016192 GO:GO:0015031 GO:GO:0012505
GO:GO:0005815 GO:GO:0000794 GO:GO:0016363 GO:GO:0007076
GO:GO:0005769 GO:GO:0045749 GO:GO:0016458 GO:GO:0045014
eggNOG:COG5491 HOGENOM:HOG000241980 HOVERGEN:HBG080200 KO:K12197
OrthoDB:EOG4PVP0T GeneTree:ENSGT00550000074957 CTD:5119 OMA:DKFEQQV
EMBL:DAAA02046271 EMBL:BC109956 IPI:IPI00706934
RefSeq:NP_001178189.1 RefSeq:XP_003583421.1 UniGene:Bt.31614
UniGene:Bt.66111 STRING:Q32KR9 Ensembl:ENSBTAT00000047273
Ensembl:ENSBTAT00000047394 GeneID:504669 GeneID:789414
KEGG:bta:504669 KEGG:bta:789414 InParanoid:Q32KR9 NextBio:20929673
Uniprot:Q32KR9
Length = 196
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 45/192 (23%), Positives = 83/192 (43%)
Query: 20 EMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSR 79
+++ + +EK +++ K A++K+ + N ++ A IR + + N
Sbjct: 7 QLKFTAKQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMA 66
Query: 80 AQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTT 139
+++ +A+ Q V M+ K + VM F++Q +D+ T
Sbjct: 67 SRVDAVASKVQTAVTMKGVTKNMAQVTKALDRALSTMDLQKVSAVMDRFEQQVQNLDVHT 126
Query: 140 EMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI 199
+M D++ Q+ +E G++V QLS P+G AS E + S
Sbjct: 127 SVMEDSMSSATTLTTPQEQVDSLILQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQE 184
Query: 200 DELEKRLAALRN 211
D+L +RLAALRN
Sbjct: 185 DQLSRRLAALRN 196
>UNIPROTKB|Q5E994 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829 GO:GO:0051301
GO:GO:0031902 GO:GO:0015031 GO:GO:0007049 CTD:57132
HOVERGEN:HBG080200 KO:K12197 EMBL:BT021026 EMBL:BC105547
IPI:IPI00713299 RefSeq:NP_001014904.1 UniGene:Bt.803
ProteinModelPortal:Q5E994 GeneID:512033 KEGG:bta:512033
NextBio:20870218 Uniprot:Q5E994
Length = 199
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 48/191 (25%), Positives = 80/191 (41%)
Query: 21 MQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRA 80
++ A + + + +EEK A+IK+ + GN +I A IR + Q N A
Sbjct: 11 LKFAAKELGRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSA 70
Query: 81 QIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTE 140
++ +A Q V M K + +M +F+ Q +D+ T+
Sbjct: 71 RVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQ 130
Query: 141 MMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGID 200
M DT+ ++ DE G+D+ +L P+G+ S T AS+ D
Sbjct: 131 QMEDTMSSTTTLTTPQGQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-D 186
Query: 201 ELEKRLAALRN 211
EL +RLA LR+
Sbjct: 187 ELSQRLARLRD 197
>UNIPROTKB|I3LU89 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045749 "negative regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045014 "negative regulation of
transcription by glucose" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0016458 "gene silencing"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0016192 GO:GO:0015031 GO:GO:0012505
GO:GO:0005815 GO:GO:0000794 GO:GO:0016363 GO:GO:0007076
GO:GO:0005769 GO:GO:0045749 GO:GO:0016458 GO:GO:0045014 KO:K12197
GeneTree:ENSGT00550000074957 CTD:5119 OMA:DKFEQQV EMBL:FP325274
RefSeq:NP_001230289.1 UniGene:Ssc.54250 Ensembl:ENSSSCT00000027461
GeneID:100628127 KEGG:ssc:100628127 Uniprot:I3LU89
Length = 196
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 45/192 (23%), Positives = 84/192 (43%)
Query: 20 EMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSR 79
+++ + +EK +++ K A++K+ + N ++ A IR + + N
Sbjct: 7 QLKFTAKQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMA 66
Query: 80 AQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTT 139
+++ +A+ Q V M+ K + VM +F++Q +D+ T
Sbjct: 67 SRVDAVASKVQTAVTMKGVTKNMAQVTKALDRALSTMDLQKVSAVMDKFEQQVQNLDVHT 126
Query: 140 EMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI 199
+M D++ Q+ +E G++V QLS P+G AS E + S
Sbjct: 127 AVMEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQE 184
Query: 200 DELEKRLAALRN 211
D+L +RLAALRN
Sbjct: 185 DQLSRRLAALRN 196
>UNIPROTKB|Q58CS7 [details] [associations]
symbol:CHMP3 "Charged multivesicular body protein 3"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491
EMBL:BT021870 EMBL:BC114072 IPI:IPI00688889 RefSeq:NP_001030223.2
UniGene:Bt.28232 ProteinModelPortal:Q58CS7 SMR:Q58CS7 STRING:Q58CS7
Ensembl:ENSBTAT00000018071 GeneID:507722 KEGG:bta:507722 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 InParanoid:Q58CS7 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB NextBio:20868194 Uniprot:Q58CS7
Length = 222
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 55/224 (24%), Positives = 100/224 (44%)
Query: 1 MNIFSK---KPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGA 57
M +F K KP PKE + E +++ R ++++I +Q+EE+K+ +K AK G +
Sbjct: 1 MGLFGKTQEKP-PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDV 59
Query: 58 TKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQME 117
+LA+++IR R+ ++ L S+A + + + A V ++
Sbjct: 60 CVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVK 119
Query: 118 -PAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEI--GV-- 172
P QA MRE K+ + + EM+ DT ++L EI G
Sbjct: 120 IPEIQA-TMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALG 178
Query: 173 DVASQLSAA-----PKGKIASKNTEDASSSGIDELEKRLAALRN 211
S+++ A P G +A+ E+ ++ ++ RLA LR+
Sbjct: 179 KAPSKVTDALPEPEPLGAMAASEDEEEEEEALEAMQSRLATLRS 222
>MGI|MGI:1914314 [details] [associations]
symbol:Chmp1b "charged multivesicular body protein 1B"
species:10090 "Mus musculus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1914314 GO:GO:0005829 GO:GO:0051301 GO:GO:0031902
GO:GO:0015031 GO:GO:0007049 EMBL:AK014091 EMBL:AK151071
EMBL:CT010307 EMBL:BC002229 IPI:IPI00117187 RefSeq:NP_077152.1
UniGene:Mm.73777 ProteinModelPortal:Q99LU0 SMR:Q99LU0 IntAct:Q99LU0
STRING:Q99LU0 PhosphoSite:Q99LU0 PaxDb:Q99LU0 PRIDE:Q99LU0
GeneID:67064 KEGG:mmu:67064 UCSC:uc008flu.2 CTD:57132
eggNOG:COG5491 HOGENOM:HOG000241980 HOVERGEN:HBG080200
InParanoid:Q99LU0 KO:K12197 OrthoDB:EOG4PVP0T NextBio:323464
CleanEx:MM_CHMP1B Genevestigator:Q99LU0
GermOnline:ENSMUSG00000031242 Uniprot:Q99LU0
Length = 199
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 48/191 (25%), Positives = 80/191 (41%)
Query: 21 MQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRA 80
++ A + + + +EEK A+IK+ + GN +I A IR + Q N A
Sbjct: 11 LKFAAKELNRSSKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQGVNFLRMSA 70
Query: 81 QIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTE 140
++ +A Q V M K + +M +F+ Q +D+ T+
Sbjct: 71 RVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQ 130
Query: 141 MMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGID 200
M DT+ ++ DE G+D+ +L P+G+ S T AS+ D
Sbjct: 131 QMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-D 186
Query: 201 ELEKRLAALRN 211
EL +RLA LR+
Sbjct: 187 ELSQRLARLRD 197
>UNIPROTKB|E1BZL2 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031 KO:K12197
GeneTree:ENSGT00550000074957 CTD:5119 EMBL:AADN02054137
EMBL:AADN02054138 IPI:IPI00679422 RefSeq:NP_001020611.1
UniGene:Gga.12873 Ensembl:ENSGALT00000009948 GeneID:415841
KEGG:gga:415841 NextBio:20819384 ArrayExpress:E1BZL2 Uniprot:E1BZL2
Length = 196
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 43/192 (22%), Positives = 84/192 (43%)
Query: 20 EMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSR 79
+++ + +EK +++ K A++K+ + N ++ A IR + + N
Sbjct: 7 QLKFTAKQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGLNWLRMA 66
Query: 80 AQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTT 139
+++ +A+ Q V M+ K + VM +F++Q +D+ T
Sbjct: 67 SRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSSMDLQKVSAVMDKFEQQVQNLDVHT 126
Query: 140 EMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI 199
+M D++ Q+ +E G+++ QL+ P+G AS E + S
Sbjct: 127 SVMEDSMSSATTLTTPQEQVDSLIVQIAEENGLEIMDQLNQLPEG--ASAVGESSMRSQE 184
Query: 200 DELEKRLAALRN 211
D+L +RLAALRN
Sbjct: 185 DQLSRRLAALRN 196
>UNIPROTKB|Q9HD42 [details] [associations]
symbol:CHMP1A "Charged multivesicular body protein 1a"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0016363 "nuclear matrix" evidence=IDA]
[GO:0016458 "gene silencing" evidence=IDA] [GO:0000794 "condensed
nuclear chromosome" evidence=IDA] [GO:0045749 "negative regulation
of S phase of mitotic cell cycle" evidence=IMP] [GO:0005769 "early
endosome" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=IDA] [GO:0005815 "microtubule organizing center"
evidence=IDA] [GO:0012505 "endomembrane system" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045014 "negative
regulation of transcription by glucose" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0008237 "metallopeptidase activity"
evidence=TAS] [GO:0008270 "zinc ion binding" evidence=TAS]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0051301 GO:GO:0016192
GO:GO:0015031 GO:GO:0008270 GO:GO:0012505 GO:GO:0008237
GO:GO:0006351 GO:GO:0010008 GO:GO:0005815 GO:GO:0000794
GO:GO:0016363 GO:GO:0007076 GO:GO:0005769 GO:GO:0045749
GO:GO:0016458 GO:GO:0045014 EMBL:AC010538 HOGENOM:HOG000241980
HOVERGEN:HBG080200 OrthoDB:EOG4PVP0T CTD:5119 EMBL:U58048
EMBL:AF281063 EMBL:D38554 EMBL:BT006841 EMBL:BC007527 EMBL:BC010000
EMBL:BC132711 EMBL:BC132713 IPI:IPI00382452 IPI:IPI01015759
PIR:JC4963 RefSeq:NP_002759.2 UniGene:Hs.589427 PDB:2JQ9 PDB:2YMB
PDB:4A5X PDBsum:2JQ9 PDBsum:2YMB PDBsum:4A5X
ProteinModelPortal:Q9HD42 DIP:DIP-50647N IntAct:Q9HD42
MINT:MINT-6946738 STRING:Q9HD42 PhosphoSite:Q9HD42 DMDM:62510514
PaxDb:Q9HD42 PRIDE:Q9HD42 DNASU:5119 Ensembl:ENST00000397901
GeneID:5119 KEGG:hsa:5119 UCSC:uc002fnu.3 GeneCards:GC16M089710
H-InvDB:HIX0013363 HGNC:HGNC:8740 MIM:164010 neXtProt:NX_Q9HD42
PharmGKB:PA33085 eggNOG:NOG331649 ChiTaRS:CHMP1A
EvolutionaryTrace:Q9HD42 GenomeRNAi:5119 NextBio:19738
ArrayExpress:Q9HD42 Bgee:Q9HD42 CleanEx:HS_CHMP1A
Genevestigator:Q9HD42 Uniprot:Q9HD42
Length = 196
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 45/192 (23%), Positives = 82/192 (42%)
Query: 20 EMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSR 79
+++ + +EK +++ K A++K+ N ++ A IR + + N
Sbjct: 7 QLKFTAKQLEKLAKKAEKDSKAEQAKVKKALLQKNVECARVYAENAIRKKNEGVNWLRMA 66
Query: 80 AQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTT 139
+++ +A+ Q V M+ K + VM F++Q +D+ T
Sbjct: 67 SRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQNLDVHT 126
Query: 140 EMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI 199
+M D++ Q+ +E G++V QLS P+G AS E + S
Sbjct: 127 SVMEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQE 184
Query: 200 DELEKRLAALRN 211
D+L +RLAALRN
Sbjct: 185 DQLSRRLAALRN 196
>UNIPROTKB|Q9Y3E7 [details] [associations]
symbol:CHMP3 "Charged multivesicular body protein 3"
species:9606 "Homo sapiens" [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0006915 EMBL:CH471053 GO:GO:0031902 GO:GO:0015031
GO:GO:0016197 GO:GO:0007049 GO:GO:0000910 GO:GO:0005546
GO:GO:0008333 GO:GO:0030496 GO:GO:0005769 GO:GO:0051036
GO:GO:0016044 EMBL:AC064848 eggNOG:COG5491 CTD:51652
HOGENOM:HOG000177219 HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB EMBL:AF219226 EMBL:AY364249 EMBL:AF151907
EMBL:AK290725 EMBL:AK294389 EMBL:AK312353 EMBL:AK315835
EMBL:AC015971 EMBL:AC068288 EMBL:BC004419 IPI:IPI00100673
IPI:IPI00478935 IPI:IPI00979305 IPI:IPI00981241
RefSeq:NP_001005753.1 RefSeq:NP_001180446.1 RefSeq:NP_001185883.1
RefSeq:NP_057163.1 UniGene:Hs.591582 PDB:2GD5 PDB:2XZE PDB:3FRT
PDB:3FRV PDBsum:2GD5 PDBsum:2XZE PDBsum:3FRT PDBsum:3FRV
ProteinModelPortal:Q9Y3E7 SMR:Q9Y3E7 DIP:DIP-48532N IntAct:Q9Y3E7
MINT:MINT-1185988 STRING:Q9Y3E7 PhosphoSite:Q9Y3E7 DMDM:73917763
PaxDb:Q9Y3E7 PRIDE:Q9Y3E7 DNASU:51652 Ensembl:ENST00000263856
Ensembl:ENST00000409225 Ensembl:ENST00000409727
Ensembl:ENST00000439940 GeneID:100526767 GeneID:51652
KEGG:hsa:100526767 KEGG:hsa:51652 UCSC:uc002srj.3 CTD:100526767
GeneCards:GC02M086730 HGNC:HGNC:29865 HPA:HPA015673 MIM:610052
neXtProt:NX_Q9Y3E7 PharmGKB:PA134920495 PhylomeDB:Q9Y3E7
ChiTaRS:CHMP3 EvolutionaryTrace:Q9Y3E7 NextBio:55614 Bgee:Q9Y3E7
CleanEx:HS_VPS24 Genevestigator:Q9Y3E7 GermOnline:ENSG00000115561
Uniprot:Q9Y3E7
Length = 222
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 55/224 (24%), Positives = 100/224 (44%)
Query: 1 MNIFSK---KPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGA 57
M +F K KP PKE + E +++ R ++++I +Q+EE+K+ +K AK G +
Sbjct: 1 MGLFGKTQEKP-PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDV 59
Query: 58 TKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQME 117
+LA+++IR R+ ++ L S+A + + + A V ++
Sbjct: 60 CIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVK 119
Query: 118 -PAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEI--GV-- 172
P QA MRE K+ + + EM+ DT ++L EI G
Sbjct: 120 IPEIQA-TMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALG 178
Query: 173 DVASQLSAA-----PKGKIASKNTEDASSSGIDELEKRLAALRN 211
S+++ A P G +A+ E+ ++ ++ RLA LR+
Sbjct: 179 KAPSKVTDALPEPEPPGAMAASEDEEEEEEALEAMQSRLATLRS 222
>MGI|MGI:1914278 [details] [associations]
symbol:2610002M06Rik "RIKEN cDNA 2610002M06 gene"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 MGI:MGI:1914278
GO:GO:0005829 GO:GO:0051301 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 HOVERGEN:HBG080200 KO:K12197
GermOnline:ENSMUSG00000031242 EMBL:AK011297 EMBL:AK019383
EMBL:AL669851 EMBL:AL844897 EMBL:BC016070 IPI:IPI00173121
RefSeq:NP_080197.2 UniGene:Mm.37274 ProteinModelPortal:Q9CQD4
SMR:Q9CQD4 STRING:Q9CQD4 PRIDE:Q9CQD4 Ensembl:ENSMUST00000120722
GeneID:67028 KEGG:mmu:67028 UCSC:uc009ucj.2
GeneTree:ENSGT00550000074957 InParanoid:Q9CQD4 NextBio:323352
Bgee:Q9CQD4 CleanEx:MM_2610002M06RIK Genevestigator:Q9CQD4
Uniprot:Q9CQD4
Length = 199
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/191 (24%), Positives = 79/191 (41%)
Query: 21 MQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRA 80
++ A + + + +EEK A+IK+ + GN +I A IR + Q N A
Sbjct: 11 LKFAAKELNRNAKKCDKEEKAEKAKIKKAIQKGNTEVARIHAENAIRQKNQAINFLRMSA 70
Query: 81 QIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTE 140
++ +A Q V M K + +M +F+ Q +D+ T+
Sbjct: 71 RVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLRSMNLEKISALMDKFEHQFETLDVQTQ 130
Query: 141 MMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGID 200
M DT+ ++ DE G+D+ +L P+G+ S AS+ D
Sbjct: 131 QMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGASVASTEQ-D 186
Query: 201 ELEKRLAALRN 211
EL +RLA LR+
Sbjct: 187 ELSQRLARLRD 197
>RGD|1566265 [details] [associations]
symbol:RGD1566265 "similar to RIKEN cDNA 2610002M06"
species:10116 "Rattus norvegicus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 RGD:1566265
GO:GO:0015031 KO:K12197 GeneTree:ENSGT00550000074957 EMBL:CH473969
RefSeq:NP_001128061.1 UniGene:Rn.8881 SMR:G3V6A6
Ensembl:ENSRNOT00000003188 GeneID:363487 KEGG:rno:363487 CTD:363487
NextBio:683469 Uniprot:G3V6A6
Length = 199
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/191 (24%), Positives = 79/191 (41%)
Query: 21 MQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRA 80
++ A + + + +EEK A+IK+ + GN +I A IR + Q N A
Sbjct: 11 LKFAAKELNRNAKKCDKEEKAEKAKIKKAIQKGNTEVARIHAENAIRQKNQAINFLRMSA 70
Query: 81 QIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTE 140
++ +A Q V M K + +M +F+ Q +D+ T+
Sbjct: 71 RVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLRSMNLEKISALMDKFEHQFETLDVQTQ 130
Query: 141 MMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGID 200
M DT+ ++ DE G+D+ +L P+G+ S AS+ D
Sbjct: 131 QMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGASVASTEQ-D 186
Query: 201 ELEKRLAALRN 211
EL +RLA LR+
Sbjct: 187 ELSQRLARLRD 197
>ZFIN|ZDB-GENE-040426-1474 [details] [associations]
symbol:chmp1a "chromatin modifying protein 1A"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-040426-1474 GO:GO:0015031 GO:GO:0010008 GO:GO:0021549
eggNOG:COG5491 HOGENOM:HOG000241980 HOVERGEN:HBG080200 KO:K12197
GeneTree:ENSGT00550000074957 EMBL:AY398372 EMBL:BC056577
EMBL:BC067665 IPI:IPI00505457 RefSeq:NP_956857.1 UniGene:Dr.10291
ProteinModelPortal:Q6PHF0 STRING:Q6PHF0 PRIDE:Q6PHF0
Ensembl:ENSDART00000122477 GeneID:393535 KEGG:dre:393535 CTD:5119
NextBio:20814556 ArrayExpress:Q6PHF0 Bgee:Q6PHF0 Uniprot:Q6PHF0
Length = 198
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 42/192 (21%), Positives = 81/192 (42%)
Query: 20 EMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSR 79
+++ ++ +E+ +++ K A++K+ + N ++ A IR + + N
Sbjct: 7 QLKFTSKQLERLAKKAEKDSKSEQAKVKKALQQKNVECARVYAENAIRKKNEGLNWLRMA 66
Query: 80 AQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTT 139
+++ +A+ Q V M+ K + VM +F+ Q +D+ T
Sbjct: 67 SRVDAVASKVQTALTMKGVAKNMTQVTKALDKALSSMDLQKVSAVMDKFETQVQNLDVHT 126
Query: 140 EMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI 199
+M D++ Q+ +E G++V QLS P G A T +
Sbjct: 127 SVMEDSMSSATTLSTPQQQVDDLILQIAEESGLEVEDQLSQLPAGASALGETSARAQEKE 186
Query: 200 DELEKRLAALRN 211
D+L +RLAALRN
Sbjct: 187 DQLSRRLAALRN 198
>UNIPROTKB|E1C230 [details] [associations]
symbol:VPS24 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK CTD:40542
EMBL:AADN02014773 IPI:IPI00579079 RefSeq:XP_420858.2
UniGene:Gga.12935 Ensembl:ENSGALT00000025484 GeneID:422918
KEGG:gga:422918 NextBio:20825474 Uniprot:E1C230
Length = 218
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 58/223 (26%), Positives = 97/223 (43%)
Query: 1 MNIFSKKPN--PKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGAT 58
M +F K P PKE + E +++ R ++++I +Q+EE+K+ IK AK G +
Sbjct: 1 MGLFGKTPEKPPKELVNEWSLKIRKEMRVIDRQIRDIQREEEKVKRSIKDAAKKGQKDVC 60
Query: 59 KILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQME- 117
ILA++LIR R+ ++ L S+A + + + A V ++
Sbjct: 61 VILAKELIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKI 120
Query: 118 PAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQ 177
P QA MRE K+ + + EM+ DT ++L EI A
Sbjct: 121 PEIQA-TMRELSKEMMKAGIIEEMLEDTFESMEDEEEMEEEAEMEIDKILFEI---TAGA 176
Query: 178 LSAAPKGKIASKNTED---ASSSGIDE------LEKRLAALRN 211
L AP K+ E +++ +DE ++ RLA LR+
Sbjct: 177 LGKAPS-KVTDALPEPEAMGAAAAVDEEEDIEAMQSRLATLRS 218
>UNIPROTKB|E2RTK6 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0045014 "negative regulation of transcription by
glucose" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0016458 "gene silencing" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0016192 GO:GO:0015031 GO:GO:0012505
GO:GO:0005815 GO:GO:0000794 GO:GO:0016363 GO:GO:0007076
GO:GO:0005769 GO:GO:0045749 GO:GO:0016458 GO:GO:0045014 KO:K12197
GeneTree:ENSGT00550000074957 CTD:5119 OMA:DKFEQQV EMBL:AAEX03003952
RefSeq:XP_546776.2 Ensembl:ENSCAFT00000037000 GeneID:489656
KEGG:cfa:489656 NextBio:20862808 Uniprot:E2RTK6
Length = 196
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 44/192 (22%), Positives = 83/192 (43%)
Query: 20 EMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSR 79
+++ + +EK +++ K A++K+ + N ++ A IR + + N
Sbjct: 7 QLKFTAKQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMA 66
Query: 80 AQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTT 139
+++ +A+ Q V M+ K + VM F++Q +D+ T
Sbjct: 67 SRVDAVASKVQTAVTMKGVTKNMAQVTKALDRALSTMDLQKVSAVMDRFEQQVQNLDVHT 126
Query: 140 EMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI 199
+M D++ Q+ +E G++V QL+ P+G AS E + S
Sbjct: 127 AVMEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLNQLPEG--ASAVGESSVRSQE 184
Query: 200 DELEKRLAALRN 211
D+L +RLAALRN
Sbjct: 185 DQLSRRLAALRN 196
>ZFIN|ZDB-GENE-030131-8370 [details] [associations]
symbol:chmp1b "chromatin modifying protein 1B"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-030131-8370
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 CTD:57132 eggNOG:COG5491
HOVERGEN:HBG080200 KO:K12197 OrthoDB:EOG4PVP0T EMBL:AY398326
EMBL:BC045934 EMBL:BC065462 EMBL:BC067569 IPI:IPI00508359
RefSeq:NP_956308.1 UniGene:Dr.8435 ProteinModelPortal:Q7ZVB1
STRING:Q7ZVB1 PRIDE:Q7ZVB1 GeneID:336426 KEGG:dre:336426
InParanoid:Q7ZVB1 OMA:EHLFNLK NextBio:20811727 Uniprot:Q7ZVB1
Length = 199
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 45/191 (23%), Positives = 81/191 (42%)
Query: 21 MQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRA 80
++ A + +++ +EEK ++K+ + GN +I A IR + Q N A
Sbjct: 11 LKFAAKELQRNSKKCDKEEKAEKVKVKKAIQKGNMEVARIHAENAIRQKNQSVNFLRMSA 70
Query: 81 QIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTE 140
++ +A Q + V M K + +M +F++Q +D+ T
Sbjct: 71 RVDAVAARVQTAVTMNQVTKSMAGVVKGMDATLKSMNLEKISGLMEKFERQFETLDVQTA 130
Query: 141 MMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGID 200
M D++ ++ DE G+D+ +L P+G+ S T AS+ D
Sbjct: 131 QMEDSMSSTTTLTTPQGQVDTLMMEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-D 186
Query: 201 ELEKRLAALRN 211
EL +RLA LR+
Sbjct: 187 ELSQRLAKLRD 197
>UNIPROTKB|Q5ZKX1 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 CTD:57132 eggNOG:COG5491
HOGENOM:HOG000241980 HOVERGEN:HBG080200 KO:K12197 OrthoDB:EOG4PVP0T
EMBL:AJ719963 IPI:IPI00582566 RefSeq:NP_001006428.1
UniGene:Gga.6697 ProteinModelPortal:Q5ZKX1 STRING:Q5ZKX1
GeneID:422143 KEGG:gga:422143 InParanoid:Q5ZKX1 NextBio:20824822
Uniprot:Q5ZKX1
Length = 199
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 47/191 (24%), Positives = 80/191 (41%)
Query: 21 MQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRA 80
++ A + + + +EEK A+IK+ + GN +I A IR + Q N A
Sbjct: 11 LKFAAKELNRNSKRCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAINFLRMSA 70
Query: 81 QIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTE 140
++ +A Q V M K + +M +F+ Q +D+ T+
Sbjct: 71 RVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQ 130
Query: 141 MMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGID 200
M +T+ ++ DE G+D+ +L P+G+ S T AS+ D
Sbjct: 131 QMENTMSNTTTLTTPQNQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-D 186
Query: 201 ELEKRLAALRN 211
EL +RLA LR+
Sbjct: 187 ELSQRLARLRD 197
>ZFIN|ZDB-GENE-040426-2600 [details] [associations]
symbol:chmp3 "charged multivesicular body protein
3" species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-2600
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK OrthoDB:EOG4VT5ZB
EMBL:BC066696 IPI:IPI00491816 RefSeq:NP_998485.1 UniGene:Dr.48763
ProteinModelPortal:Q6NY88 SMR:Q6NY88 STRING:Q6NY88 PRIDE:Q6NY88
Ensembl:ENSDART00000055487 GeneID:406621 KEGG:dre:406621
InParanoid:Q6NY88 NextBio:20818164 Bgee:Q6NY88 Uniprot:Q6NY88
Length = 221
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 56/223 (25%), Positives = 100/223 (44%)
Query: 1 MNIFSK---KPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGA 57
M +F K KP PK+ + E +++ R ++++I +Q+EE+K+ IK AK G +
Sbjct: 1 MGLFGKTQEKP-PKDLINEWSLKIRKEMRVIDRQIRDIQREEEKVKRSIKDAAKKGQKDV 59
Query: 58 TKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQME 117
ILA+++I+ ++ I L S+AQ+ + + + V ++
Sbjct: 60 CIILAKEMIQSKRAINKLYASKAQMNSVLLSMKNQLSVLRVAGALQKSTEVMKAMQSLVK 119
Query: 118 -PAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEI--GV-- 172
P QA MR+ K+ + + EM+ DT+ ++L EI G
Sbjct: 120 IPEIQA-TMRDLSKEMMKAGIIEEMLEDTLEGMDDEEEMEEAAEAEVDKILFEITAGALG 178
Query: 173 DVASQLSAAPK----GKIASKNTEDASSSGIDELEKRLAALRN 211
S+++ P G A+ E I+E++ RLAALR+
Sbjct: 179 KAPSKVTDLPDPVAIGATAAPEEESEEEEEIEEMQSRLAALRS 221
>UNIPROTKB|I3LFQ9 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK EMBL:CU467088
RefSeq:XP_003354782.1 Ensembl:ENSSSCT00000031530 GeneID:100522249
KEGG:ssc:100522249 Uniprot:I3LFQ9
Length = 221
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 55/224 (24%), Positives = 101/224 (45%)
Query: 1 MNIFSK---KPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGA 57
M +F K KP PKE + E +++ R ++++I +Q+EE+K+ +K AK G +
Sbjct: 1 MGLFGKTQEKP-PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDV 59
Query: 58 TKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQME 117
+LA+++IR R+ ++ L S+A + + + A V ++
Sbjct: 60 CVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVK 119
Query: 118 -PAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEI--GV-- 172
P QA MRE K+ + + EM+ DT ++L EI G
Sbjct: 120 IPEIQA-TMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGALG 178
Query: 173 DVASQLSAA-----PKGKIASKNTEDASSSGIDELEKRLAALRN 211
S+++ A P G +A+ E+ + ++ ++ RLA LR+
Sbjct: 179 KAPSKVTDALPEPEPPGAMAASEDEEEEEA-LEAMQSRLATLRS 221
>RGD|708556 [details] [associations]
symbol:Chmp3 "charged multivesicular body protein 3"
species:10116 "Rattus norvegicus" [GO:0000815 "ESCRT III complex"
evidence=IC] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IMP]
[GO:0005769 "early endosome" evidence=IDA] [GO:0005770 "late
endosome" evidence=IDA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008333 "endosome to
lysosome transport" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030496 "midbody" evidence=IDA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0051036 "regulation of
endosome size" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
RGD:708556 GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 GO:GO:0005770
GO:GO:0007049 GO:GO:0000910 GO:GO:0005546 GO:GO:0008333
GO:GO:0030496 GO:GO:0005769 GO:GO:0051036 GO:GO:0000815
eggNOG:COG5491 CTD:51652 GeneTree:ENSGT00550000074896
HOGENOM:HOG000177219 HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB EMBL:AY150169 IPI:IPI00192445 RefSeq:NP_758834.1
UniGene:Rn.162751 ProteinModelPortal:Q8CGS4 SMR:Q8CGS4
STRING:Q8CGS4 PhosphoSite:Q8CGS4 Ensembl:ENSRNOT00000010253
GeneID:282834 KEGG:rno:282834 UCSC:RGD:708556 InParanoid:Q8CGS4
NextBio:624897 Genevestigator:Q8CGS4 GermOnline:ENSRNOG00000007356
Uniprot:Q8CGS4
Length = 223
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 56/225 (24%), Positives = 101/225 (44%)
Query: 1 MNIFSK---KPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGA 57
M +F K KP PKE + E +++ R ++++I +Q+EE+K+ +K AK G +
Sbjct: 1 MGLFGKTQEKP-PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEV 59
Query: 58 TKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQME 117
+LA+++IR R+ ++ L S+A + + + A V ++
Sbjct: 60 CVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVK 119
Query: 118 -PAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEI--GV-- 172
P QA MRE K+ + + EM+ DT ++L EI G
Sbjct: 120 IPEIQA-TMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALG 178
Query: 173 DVASQLSAA-----PKGKIA-SKNTEDASSSGIDELEKRLAALRN 211
S+++ A P G +A S+ E+ ++ ++ RLA LR+
Sbjct: 179 KAPSKVTDALPEPEPAGAMAASEGDEEDDEEDLEAMQSRLATLRS 223
>UNIPROTKB|E2RDX0 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 OMA:NIDRQIR EMBL:AAEX03010929
Ensembl:ENSCAFT00000011979 NextBio:20851539 Uniprot:E2RDX0
Length = 292
Score = 159 (61.0 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 55/224 (24%), Positives = 101/224 (45%)
Query: 1 MNIFSK---KPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGA 57
M +F K KP PKE + E +++ R ++++I +Q+EE+K+ +K AK G +
Sbjct: 72 MGLFGKTQEKP-PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDV 130
Query: 58 TKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQME 117
+LA+++IR R+ ++ L S+A + + + A V ++
Sbjct: 131 CVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVK 190
Query: 118 -PAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEI--GV-- 172
P QA MRE K+ + + EM+ DT ++L EI G
Sbjct: 191 IPEIQA-TMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGALG 249
Query: 173 DVASQLSAA-----PKGKIASKNTEDASSSGIDELEKRLAALRN 211
S+++ A P G +A+ E+ + ++ ++ RLA LR+
Sbjct: 250 KAPSKVTDALPEPEPSGAMAASEDEEEEEA-LEAMQSRLATLRS 292
>MGI|MGI:1913950 [details] [associations]
symbol:Chmp3 "charged multivesicular body protein 3"
species:10090 "Mus musculus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0005546 "phosphatidylinositol-4,5-bisphosphate
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005770 "late endosome" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030496 "midbody" evidence=ISO]
[GO:0051036 "regulation of endosome size" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1913950 GO:GO:0005829 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 GO:GO:0000910 GO:GO:0005546 GO:GO:0008333
GO:GO:0030496 GO:GO:0005769 GO:GO:0051036 eggNOG:COG5491 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK OrthoDB:EOG4VT5ZB
EMBL:AK009414 EMBL:AK014818 EMBL:AK016677 EMBL:AK018611
EMBL:AK083562 EMBL:BC049964 IPI:IPI00347275 RefSeq:NP_080059.2
UniGene:Mm.181278 ProteinModelPortal:Q9CQ10 SMR:Q9CQ10
IntAct:Q9CQ10 STRING:Q9CQ10 PhosphoSite:Q9CQ10 PaxDb:Q9CQ10
PRIDE:Q9CQ10 Ensembl:ENSMUST00000059462 Ensembl:ENSMUST00000065364
GeneID:66700 KEGG:mmu:66700 UCSC:uc009cgw.1 InParanoid:Q9CQ10
NextBio:322405 Bgee:Q9CQ10 CleanEx:MM_VPS24 Genevestigator:Q9CQ10
GermOnline:ENSMUSG00000053119 Uniprot:Q9CQ10
Length = 224
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 55/226 (24%), Positives = 101/226 (44%)
Query: 1 MNIFSK---KPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGA 57
M +F K KP PKE + E +++ R ++++I +Q+EE+K+ +K AK G +
Sbjct: 1 MGLFGKTQEKP-PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEV 59
Query: 58 TKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQME 117
+LA+++IR R+ ++ L S+A + + + A V ++
Sbjct: 60 CVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVK 119
Query: 118 -PAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEI--GV-- 172
P QA MRE K+ + + EM+ DT ++L EI G
Sbjct: 120 IPEIQA-TMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALG 178
Query: 173 DVASQLSAA-----PKGKIAS--KNTEDASSSGIDELEKRLAALRN 211
S+++ A P G +A+ + E+ ++ ++ RLA LR+
Sbjct: 179 KAPSKVTDALPEPEPAGAMAASEEGEEEEDEEDLEAMQSRLATLRS 224
>FB|FBgn0036805 [details] [associations]
symbol:Chmp1 "Chmp1" species:7227 "Drosophila melanogaster"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 EMBL:AE014296 GO:GO:0015031 eggNOG:COG5491 KO:K12197
GeneTree:ENSGT00550000074957 OMA:AKMATIT EMBL:AY060798
RefSeq:NP_649051.3 UniGene:Dm.3851 STRING:Q95SH2
EnsemblMetazoa:FBtr0075092 GeneID:40036 KEGG:dme:Dmel_CG4108
UCSC:CG4108-RA CTD:40036 FlyBase:FBgn0036805 InParanoid:Q95SH2
OrthoDB:EOG4GTHW3 GenomeRNAi:40036 NextBio:816669 Uniprot:Q95SH2
Length = 203
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 44/190 (23%), Positives = 79/190 (41%)
Query: 21 MQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRA 80
++ A + +E+ ++EEK A+ K+ + GN +I A IR + Q N A
Sbjct: 13 LKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQKNQAVNYLRMSA 72
Query: 81 QIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTE 140
++ +A+ Q+ V M K + +M +F+ Q +D+ +
Sbjct: 73 RVDAVASRVQSALTTRKVTGSMAGVVKAMDAAMKGMNLEKISSLMEKFESQFEDLDVQSS 132
Query: 141 MMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGID 200
+M T+ QV DE G+++ +L + + + +T A S D
Sbjct: 133 VMEGTMSDTVTTSVPQGDVDNLLQQVADEAGLELNMELPSGVQSQSVGAST--AVSQEQD 190
Query: 201 ELEKRLAALR 210
EL +RLA LR
Sbjct: 191 ELTQRLARLR 200
>RGD|1306781 [details] [associations]
symbol:Chmp2b "charged multivesicular body protein 2B"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
InterPro:IPR005024 Pfam:PF03357 RGD:1306781 GO:GO:0005739
GO:GO:0005634 GO:GO:0015031 GeneTree:ENSGT00550000074737
IPI:IPI00766292 Ensembl:ENSRNOT00000000904 Uniprot:F1M8B7
Length = 107
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 32/97 (32%), Positives = 57/97 (58%)
Query: 115 QMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDV 174
+M+P K + M+ FQK++ +M+MT EM++DT+ QVLDEIG+++
Sbjct: 9 KMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEI 68
Query: 175 ASQLSAAPKG--KIASKNTEDASSSGIDELEKRLAAL 209
+ +++ AP + S +T A+ S +E+E++L AL
Sbjct: 69 SGKMAKAPSAARSLPSASTSKATISD-EEIERQLKAL 104
>DICTYBASE|DDB_G0267394 [details] [associations]
symbol:vps46 "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0045324 "late endosome to vacuole transport" evidence=ISS]
[GO:0006623 "protein targeting to vacuole" evidence=ISS]
[GO:0005770 "late endosome" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0267394 GenomeReviews:CM000150_GR EMBL:AAFI02000003
GO:GO:0010008 GO:GO:0005770 GO:GO:0006623 GO:GO:0045324
eggNOG:COG5491 KO:K12197 OMA:EHLFNLK EMBL:AF081802
RefSeq:XP_647634.1 ProteinModelPortal:O96552 STRING:O96552
PRIDE:O96552 EnsemblProtists:DDB0191317 GeneID:8616449
KEGG:ddi:DDB_G0267394 Uniprot:O96552
Length = 192
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 37/186 (19%), Positives = 81/186 (43%)
Query: 20 EMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSR 79
+++ ++ +EK+ +Q EK ++K+ + GN +I A+ IR + Q N
Sbjct: 7 QLKFTSKQLEKQSKKSEQSEKAQKIKLKKAIEQGNMDGARIYAQNAIREKNQSLNYLRLA 66
Query: 80 AQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTT 139
++I +A+ + SV M+ K +VM +F++Q +D+ +
Sbjct: 67 SRIDAVASRVETAIRMKSVTGSMANIVKSMEKSMRNMDLEKITQVMDQFERQFEDLDVQS 126
Query: 140 EMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI 199
+ + + QV DE G++V Q+ +AP K+ T++ + +
Sbjct: 127 VYVENAMNQTTTLSTPADQVDLLISQVADEHGLNVGMQMGSAPSEKVQQGETDELTER-L 185
Query: 200 DELEKR 205
+ L+++
Sbjct: 186 NRLKQK 191
>UNIPROTKB|F8VVT7 [details] [associations]
symbol:CHMP1A "Charged multivesicular body protein 1a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:AC010538 HGNC:HGNC:8740 ChiTaRS:CHMP1A IPI:IPI01022543
ProteinModelPortal:F8VVT7 Ensembl:ENST00000550102
ArrayExpress:F8VVT7 Bgee:F8VVT7 Uniprot:F8VVT7
Length = 187
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 45/192 (23%), Positives = 81/192 (42%)
Query: 20 EMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSR 79
+++ + +EK +++ K A++K+ N ++ A IR + + N
Sbjct: 7 QLKFTAKQLEKLAKKAEKDSKAEQAKVKKALLQKNVECARVYAENAIRKKNEGVNWLRMA 66
Query: 80 AQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTT 139
+++ +A S V M+ K + VM F++Q +D+ T
Sbjct: 67 SRVDAVA---------SKVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQNLDVHT 117
Query: 140 EMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI 199
+M D++ Q+ +E G++V QLS P+G AS E + S
Sbjct: 118 SVMEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQE 175
Query: 200 DELEKRLAALRN 211
D+L +RLAALRN
Sbjct: 176 DQLSRRLAALRN 187
>FB|FBgn0037231 [details] [associations]
symbol:vps24 "Charged multivesicular body protein 3"
species:7227 "Drosophila melanogaster" [GO:0015031 "protein
transport" evidence=IEA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] InterPro:IPR005024 Pfam:PF03357 EMBL:AE014297
GO:GO:0006911 GO:GO:0015031 eggNOG:COG5491
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK EMBL:AY058381
RefSeq:NP_649451.1 UniGene:Dm.20141 SMR:Q9VN02 IntAct:Q9VN02
MINT:MINT-896357 STRING:Q9VN02 EnsemblMetazoa:FBtr0078958
GeneID:40542 KEGG:dme:Dmel_CG9779 UCSC:CG9779-RA CTD:40542
FlyBase:FBgn0037231 InParanoid:Q9VN02 OrthoDB:EOG4Z614S
GenomeRNAi:40542 NextBio:819274 Uniprot:Q9VN02
Length = 223
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 45/223 (20%), Positives = 97/223 (43%)
Query: 1 MNIFSKKPN--PKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGAT 58
M +F + P+ PKE ++E +++ ++++I ++Q+EE+K+ +K+ A+ +
Sbjct: 1 MGLFGRTPSKDPKEQVQEWTHKIRKEGNQLDRQIRSIQREEEKVKRSLKQAAQKNDRDTC 60
Query: 59 KILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEP 118
ILA++++ R+ I + S+A + I + + V +
Sbjct: 61 VILAKEIVNARKAINRIYTSKAHLNSIQMQMKNQLSTLRVAGSLQKSTEVLQAMQSLVRY 120
Query: 119 AKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEI--G----V 172
+ A +MR+ K+ + + EM+ +T+ +VL EI G
Sbjct: 121 PELAGIMRDMSKEMMKAGIIEEMLDETMDSLEESEELEEEASKEVDKVLWEITDGKLGEA 180
Query: 173 DVASQLSAAPKGKIASKNTE----DASSSGIDELEKRLAALRN 211
+ + + A K ++ E D + E++ RLA+LR+
Sbjct: 181 PLPPEATPADKASASAARVEAEQDDEEGEELQEMQSRLASLRS 223
>UNIPROTKB|F1SVC7 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 EMBL:CU467088
Ensembl:ENSSSCT00000009004 Uniprot:F1SVC7
Length = 217
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 49/216 (22%), Positives = 95/216 (43%)
Query: 6 KKPNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQL 65
K +P + E +++ R ++++I +Q+EE+K+ +K AK G + +LA+++
Sbjct: 4 KGSSPMTQVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEM 63
Query: 66 IRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQME-PAKQAKV 124
IR R+ ++ L S+A + + + A V ++ P QA
Sbjct: 64 IRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQA-T 122
Query: 125 MREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEI--GV--DVASQLSA 180
MRE K+ + + EM+ DT ++L EI G S+++
Sbjct: 123 MRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGALGKAPSKVTD 182
Query: 181 A-----PKGKIASKNTEDASSSGIDELEKRLAALRN 211
A P G +A+ E+ + ++ ++ RLA LR+
Sbjct: 183 ALPEPEPPGAMAASEDEEEEEA-LEAMQSRLATLRS 217
>WB|WBGene00017735 [details] [associations]
symbol:F23C8.6 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0015031 GO:GO:0040011
eggNOG:COG5491 HOGENOM:HOG000241980 KO:K12197
GeneTree:ENSGT00550000074957 EMBL:FO081207 OMA:AKMATIT PIR:T33826
RefSeq:NP_490974.1 ProteinModelPortal:Q9TXI3 STRING:Q9TXI3
PaxDb:Q9TXI3 EnsemblMetazoa:F23C8.6 GeneID:171801
KEGG:cel:CELE_F23C8.6 UCSC:F23C8.6 CTD:171801 WormBase:F23C8.6
InParanoid:Q9TXI3 NextBio:872753 Uniprot:Q9TXI3
Length = 205
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 42/199 (21%), Positives = 78/199 (39%)
Query: 13 ALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQI 72
AL + +++ A + +EK +++EK ++ K GN+ ++ A IR + +
Sbjct: 9 ALEKHLFDLKFAAKQLEKNAQRCEKDEKVEKDKLTAAIKKGNKEVAQVHAENAIRKKNEA 68
Query: 73 ANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQS 132
N A+I +A Q V M K ++M F++
Sbjct: 69 VNYIKMAARIDAVAARVQTAATQKRVTASMSGVVKAMESAMKSMNLEKVQQLMDRFERDF 128
Query: 133 AQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTE 192
+D+TT+ M T+ + D+ G+++ +L P + T
Sbjct: 129 EDLDVTTKTMEKTMDGTTVLNAPKSQVDALIAEAADKAGIELNQEL---PSNVPTALPTG 185
Query: 193 DASSSGIDELEKRLAALRN 211
+ S +L +RLAALRN
Sbjct: 186 TQAVSEDKDLTERLAALRN 204
>TAIR|locus:2007883 [details] [associations]
symbol:VPS46.1 "vacuolar protein sorting 46.1"
species:3702 "Arabidopsis thaliana" [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000578 "embryonic axis specification"
evidence=IGI] [GO:0009790 "embryo development" evidence=IGI]
[GO:0032509 "endosome transport via multivesicular body sorting
pathway" evidence=IGI] [GO:0040007 "growth" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR005024
Pfam:PF03357 EMBL:CP002684 GO:GO:0040007 GO:GO:0015031
GO:GO:0000578 eggNOG:COG5491 KO:K12197 GO:GO:0032509 OMA:AKMATIT
EMBL:AY085606 EMBL:AK118350 IPI:IPI00533081 RefSeq:NP_173215.1
UniGene:At.41817 IntAct:Q8LE58 STRING:Q8LE58
EnsemblPlants:AT1G17730.1 GeneID:838349 KEGG:ath:AT1G17730
TAIR:At1g17730 InParanoid:Q8LE58 ProtClustDB:CLSN2682103
Genevestigator:Q8LE58 Uniprot:Q8LE58
Length = 203
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 40/193 (20%), Positives = 79/193 (40%)
Query: 20 EMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSR 79
E++ ++ ++++ ++EE+ ++K+ + GN +I A IR R + N
Sbjct: 13 ELKFTSKSLQRQARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLS 72
Query: 80 AQIRGIATH--TQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDM 137
+++ + TQA A + ++ K ++ M F+KQ M++
Sbjct: 73 SRLDAVVARLDTQAKMATITKSMTNIVKSLESSLTTGNLQ--KMSETMDSFEKQFVNMEV 130
Query: 138 TTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSS 197
E M + + QV D+ G++V+ L P G TE+
Sbjct: 131 QAEFMDNAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQ-PAGHAIPTKTEEKVEE 189
Query: 198 GIDELEKRLAALR 210
D+L +RLA L+
Sbjct: 190 --DDLTRRLAELK 200
>CGD|CAL0000893 [details] [associations]
symbol:orf19.4307 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005770 "late endosome" evidence=IEA] [GO:0032511
"late endosome to vacuole transport via multivesicular body sorting
pathway" evidence=IEA] [GO:0006623 "protein targeting to vacuole"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0000893
GO:GO:0005739 GO:GO:0015031 EMBL:AACQ01000021 EMBL:AACQ01000022
eggNOG:COG5491 KO:K12197 RefSeq:XP_720614.1 RefSeq:XP_720742.1
ProteinModelPortal:Q5AG72 STRING:Q5AG72 GeneID:3637690
GeneID:3637809 KEGG:cal:CaO19.11783 KEGG:cal:CaO19.4307
Uniprot:Q5AG72
Length = 292
Score = 135 (52.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 47/205 (22%), Positives = 82/205 (40%)
Query: 8 PNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIR 67
P L +S +++ + + ++ +EE + A+IK+ GN ++ A+ IR
Sbjct: 89 PPTMAGLEQSLFQLKFTAKQLNRQATKASKEELQEKAKIKKALSQGNNDIAQLYAQNAIR 148
Query: 68 LRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMRE 127
+ NL ++I +A+ Q SV M + + VM +
Sbjct: 149 KSNERINLLRLASRIDAVASRVQTAVTMRSVTGNMTQVIRGMDKALQTMNLERISLVMDK 208
Query: 128 FQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIA 187
F+ Q +D +T T QV DE G+++ L+A K +I
Sbjct: 209 FETQFEDLDASTNYYETTTNNVNALTTPQDQVDELLNQVADEAGIEMKQGLNAT-KVEIT 267
Query: 188 SKNTEDA-SSSGIDELEKRLAALRN 211
S ++ S D+L +RL ALRN
Sbjct: 268 SPVAPNSISEEKEDKLAERLRALRN 292
>UNIPROTKB|Q5AG72 [details] [associations]
symbol:DID2 "Putative uncharacterized protein DID2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0000893
GO:GO:0005739 GO:GO:0015031 EMBL:AACQ01000021 EMBL:AACQ01000022
eggNOG:COG5491 KO:K12197 RefSeq:XP_720614.1 RefSeq:XP_720742.1
ProteinModelPortal:Q5AG72 STRING:Q5AG72 GeneID:3637690
GeneID:3637809 KEGG:cal:CaO19.11783 KEGG:cal:CaO19.4307
Uniprot:Q5AG72
Length = 292
Score = 135 (52.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 47/205 (22%), Positives = 82/205 (40%)
Query: 8 PNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIR 67
P L +S +++ + + ++ +EE + A+IK+ GN ++ A+ IR
Sbjct: 89 PPTMAGLEQSLFQLKFTAKQLNRQATKASKEELQEKAKIKKALSQGNNDIAQLYAQNAIR 148
Query: 68 LRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMRE 127
+ NL ++I +A+ Q SV M + + VM +
Sbjct: 149 KSNERINLLRLASRIDAVASRVQTAVTMRSVTGNMTQVIRGMDKALQTMNLERISLVMDK 208
Query: 128 FQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIA 187
F+ Q +D +T T QV DE G+++ L+A K +I
Sbjct: 209 FETQFEDLDASTNYYETTTNNVNALTTPQDQVDELLNQVADEAGIEMKQGLNAT-KVEIT 267
Query: 188 SKNTEDA-SSSGIDELEKRLAALRN 211
S ++ S D+L +RL ALRN
Sbjct: 268 SPVAPNSISEEKEDKLAERLRALRN 292
>TAIR|locus:2032607 [details] [associations]
symbol:VPS46.2 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS;RCA] [GO:0000578 "embryonic axis specification"
evidence=IGI] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0032509 "endosome transport via
multivesicular body sorting pathway" evidence=IGI] [GO:0040007
"growth" evidence=IGI] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0010286 "heat acclimation" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR005024 Pfam:PF03357
EMBL:CP002684 GO:GO:0040007 GO:GO:0015031 GO:GO:0009793
EMBL:AC008017 GO:GO:0000578 KO:K12197 OMA:EHLFNLK GO:GO:0032509
ProtClustDB:CLSN2682103 UniGene:At.22952 UniGene:At.71264
EMBL:AY059851 EMBL:AY081673 IPI:IPI00527973 PIR:G96755
RefSeq:NP_565053.1 ProteinModelPortal:Q9SSM4 IntAct:Q9SSM4
STRING:Q9SSM4 PRIDE:Q9SSM4 EnsemblPlants:AT1G73030.1 GeneID:843634
KEGG:ath:AT1G73030 TAIR:At1g73030 InParanoid:Q9SSM4
PhylomeDB:Q9SSM4 ArrayExpress:Q9SSM4 Genevestigator:Q9SSM4
Uniprot:Q9SSM4
Length = 203
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 36/191 (18%), Positives = 75/191 (39%)
Query: 20 EMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSR 79
+++ ++ ++++ ++EEK ++K+ + GN +I A IR R + N
Sbjct: 13 DLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLA 72
Query: 80 AQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTT 139
+++ + +++ K ++ M F+KQ M++
Sbjct: 73 SRLDAVVARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQA 132
Query: 140 EMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI 199
E M + + QV D+ G++V+ L P G TE+
Sbjct: 133 EFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQ-PAGHAIPTKTEEKVDE-- 189
Query: 200 DELEKRLAALR 210
D+L +RLA L+
Sbjct: 190 DDLSRRLAELK 200
>UNIPROTKB|F5H875 [details] [associations]
symbol:CHMP1A "Charged multivesicular body protein 1a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:AC010538 IPI:IPI01015759 HGNC:HGNC:8740 ChiTaRS:CHMP1A
ProteinModelPortal:F5H875 SMR:F5H875 Ensembl:ENST00000535997
ArrayExpress:F5H875 Bgee:F5H875 Uniprot:F5H875
Length = 132
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 35/132 (26%), Positives = 57/132 (43%)
Query: 80 AQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTT 139
+++ +A+ Q V M+ K + VM F++Q +D+ T
Sbjct: 3 SRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQNLDVHT 62
Query: 140 EMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI 199
+M D++ Q+ +E G++V QLS P+G AS E + S
Sbjct: 63 SVMEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQE 120
Query: 200 DELEKRLAALRN 211
D+L +RLAALRN
Sbjct: 121 DQLSRRLAALRN 132
>UNIPROTKB|H9L0W3 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 GeneTree:ENSGT00550000074737
EMBL:AADN02053084 EMBL:AADN02053085 Ensembl:ENSGALT00000029274
OMA:EMMNDAT Uniprot:H9L0W3
Length = 104
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 123 KVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 182
K+M EF+KQ+ MDM E+M+D I QVLDE+G+++ +L+ P
Sbjct: 8 KIMMEFEKQAEIMDMKEELMNDAIDDAMGDEDDEEESDAVVSQVLDELGLNLTDELATLP 67
Query: 183 K--GKIASKN--TEDASSSGID---ELEKRLAALR 210
G +A+ +A+++ D +LE+RL LR
Sbjct: 68 PPGGSLAAGEGRAAEAAAALADADADLEERLKNLR 102
>TAIR|locus:2075924 [details] [associations]
symbol:VPS24.2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0000815
"ESCRT III complex" evidence=ISS] InterPro:IPR005024 Pfam:PF03357
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177219 KO:K12193 EMBL:AL353992
IPI:IPI00548688 PIR:T48976 RefSeq:NP_190086.1 UniGene:At.53746
ProteinModelPortal:Q9LXH5 SMR:Q9LXH5 EnsemblPlants:AT3G45000.1
GeneID:823635 KEGG:ath:AT3G45000 TAIR:At3g45000 InParanoid:Q9LXH5
OMA:AFSKEMT PhylomeDB:Q9LXH5 ArrayExpress:Q9LXH5
Genevestigator:Q9LXH5 Uniprot:Q9LXH5
Length = 200
Score = 117 (46.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 41/184 (22%), Positives = 75/184 (40%)
Query: 35 LQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHA 94
+++EE+ + IK + K + K LAR+++ R+ + L ++AQ+ I+ H A
Sbjct: 10 IEREERNVHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIA 69
Query: 95 HSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXX 154
+ M+ + A M+ F K+ + + E +SD +
Sbjct: 70 TAVTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAVDNALDSED 129
Query: 155 XXXXXXXXXXQVLDEIGVDVASQLSAA--------PKGKIASKNTEDASSSGIDELEKRL 206
+VL I + A++L A P K + + EDA G+D E+ L
Sbjct: 130 IEEEIEEEVDKVLTAIAGETAAELPEAVRKQKMNVPAQKAETLHGEDAIVEGVDA-EEEL 188
Query: 207 AALR 210
A+R
Sbjct: 189 EAIR 192
>SGD|S000006435 [details] [associations]
symbol:DID2 "Class E protein of the vacuolar protein-sorting
(Vps) pathway" species:4932 "Saccharomyces cerevisiae" [GO:0006623
"protein targeting to vacuole" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0012505 "endomembrane system"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0032511 "late endosome to vacuole transport via multivesicular
body sorting pathway" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005770 "late endosome"
evidence=IDA] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0005768 "endosome" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 SGD:S000006435 GO:GO:0012505
EMBL:BK006944 GO:GO:0010008 GO:GO:0005770 GO:GO:0006623
eggNOG:COG5491 HOGENOM:HOG000241980 KO:K12197
GeneTree:ENSGT00550000074957 GO:GO:0032511 OrthoDB:EOG42Z80Q
EMBL:Z28260 RefSeq:NP_012961.3 RefSeq:NP_012963.3 PDB:3GGZ
PDBsum:3GGZ ProteinModelPortal:P69771 IntAct:P69771
MINT:MINT-4493543 STRING:P69771 PaxDb:P69771 EnsemblFungi:YKR035W-A
GeneID:853906 GeneID:853909 KEGG:sce:YKR035W-A KEGG:sce:YKR037C
CYGD:YKR035w-a KO:K11573 EvolutionaryTrace:P69771 NextBio:975236
Genevestigator:P69771 GermOnline:YKR035W-A Uniprot:P69771
Length = 204
Score = 116 (45.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 41/204 (20%), Positives = 82/204 (40%)
Query: 9 NPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRL 68
N L + +++ ++ ++K+ +EEK+ ++KR A NE ++I A IR
Sbjct: 4 NSAAGLENTLFQLKFTSKQLQKQANKASKEEKQETNKLKR-ALNENEDISRIYASNAIRK 62
Query: 69 RQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREF 128
+ + L +++ +A+ Q V M + +M +F
Sbjct: 63 KNERLQLLKLASRVDSVASRVQTAVTMRQVSASMGQVCKGMDKALQNMNLQQITMIMDKF 122
Query: 129 QKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDV--ASQLSAAPKGKI 186
++Q +D + + D +V DE G+++ +++L P+ K
Sbjct: 123 EQQFEDLDTSVNVYEDMGVNSDAMLVDNDKVDELMSKVADENGMELKQSAKLDNVPEIKA 182
Query: 187 ASKNTEDASSSGIDELEKRLAALR 210
N +D D+L +RL ALR
Sbjct: 183 KEVNVDDEKE---DKLAQRLRALR 203
>SGD|S000001524 [details] [associations]
symbol:VPS24 "Subunit of the ESCRT-III complex" species:4932
"Saccharomyces cerevisiae" [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IC] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000815
"ESCRT III complex" evidence=IDA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0070676 "intralumenal vesicle formation" evidence=IMP]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
SGD:S000001524 GO:GO:0015031 GO:GO:0012505 EMBL:BK006944
GO:GO:0045324 GO:GO:0000815 EMBL:X71621 eggNOG:COG5491
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219 KO:K12193
GO:GO:0043162 GO:GO:0070676 OrthoDB:EOG4F7RVD EMBL:Z28041
EMBL:AY557901 PIR:S37862 RefSeq:NP_012883.1
ProteinModelPortal:P36095 SMR:P36095 DIP:DIP-7295N IntAct:P36095
MINT:MINT-468346 STRING:P36095 PaxDb:P36095 EnsemblFungi:YKL041W
GeneID:853825 KEGG:sce:YKL041W CYGD:YKL041w OMA:NIDRQIR
NextBio:975014 Genevestigator:P36095 GermOnline:YKL041W
Uniprot:P36095
Length = 224
Score = 101 (40.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 28/139 (20%), Positives = 60/139 (43%)
Query: 8 PNPKEALRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIR 67
P+PKE R + ++ R +EK + L + K IK++AK + ++ A++L +
Sbjct: 11 PDPKEQQRRIRSVLRKNGRNIEKSLRELTVLQNKTQQLIKKSAKKNDVRTVRLYAKELYQ 70
Query: 68 LRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMRE 127
+ +Q + SRAQ+ + +++ + + M E
Sbjct: 71 INKQYDRMYTSRAQLDSVRMKIDEAIRMNTLSNQMADSAGLMREVNSLVRLPQLRNTMIE 130
Query: 128 FQKQSAQMDMTTEMMSDTI 146
+K+ + + +EM+ DT+
Sbjct: 131 LEKELMKSGIISEMVDDTM 149
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 185 KIASKNTEDASSSGIDELEKRLAALRN 211
+I + ++ + ++E+ +RL AL+N
Sbjct: 198 EIPDEKVDEEADRMVNEMRERLRALQN 224
>POMBASE|SPBC13G1.12 [details] [associations]
symbol:did2 "ESCRT III complex subunit Did2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000815 "ESCRT III
complex" evidence=ISM] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005770 "late endosome" evidence=ISO] [GO:0006623
"protein targeting to vacuole" evidence=IC] [GO:0006900 "membrane
budding" evidence=IC] [GO:0012505 "endomembrane system"
evidence=IEA] [GO:0032511 "late endosome to vacuole transport via
multivesicular body sorting pathway" evidence=ISO] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IC]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPBC13G1.12 EMBL:CU329671
GO:GO:0012505 GenomeReviews:CU329671_GR GO:GO:0005770 GO:GO:0006623
GO:GO:0000815 eggNOG:COG5491 HOGENOM:HOG000241980 GO:GO:0032511
PIR:T39413 RefSeq:NP_596562.2 STRING:O60074 GeneID:2539670
OrthoDB:EOG42Z80Q NextBio:20800824 GO:GO:0006900 GO:GO:0043162
Uniprot:O60074
Length = 200
Score = 104 (41.7 bits), Expect = 0.00046, P = 0.00046
Identities = 41/198 (20%), Positives = 77/198 (38%)
Query: 14 LRESKREMQHATRGMEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIA 73
L S +++ A + + K+ +EE+ ++K+ GN +I A IR +Q+
Sbjct: 4 LEASLFQLKFAAKSLNKQSLKAAKEERAEREKVKKAITKGNSEIARIYASNAIRKQQESL 63
Query: 74 NLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSA 133
NL ++I +++ Q +V M ++VM +F+ Q
Sbjct: 64 NLLKLSSRIDAVSSRLQTAVTMRAVSGNMAGVVRGMDRAMKTMNLEMISQVMDKFEAQFD 123
Query: 134 QMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTED 193
+++ T M+ + V DE G++ ++ AS T
Sbjct: 124 DVNVQTGYMNKAMGSVTAVDTPQEDVDLLMQTVADEAGLEFNQNMNNNLSVPAASVPTPA 183
Query: 194 ASSSGIDELEKRLAALRN 211
A D L++RL ALR+
Sbjct: 184 APVED-DNLQERLRALRS 200
>ASPGD|ASPL0000002845 [details] [associations]
symbol:vps24 species:162425 "Emericella nidulans"
[GO:0071467 "cellular response to pH" evidence=IMP;IPI] [GO:0043936
"asexual sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0030448 "hyphal growth" evidence=IEA] [GO:0043328
"protein targeting to vacuole involved in ubiquitin-dependent
protein catabolic process via the multivesicular body sorting
pathway" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0000815 "ESCRT III complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 EMBL:BN001301 eggNOG:COG5491
HOGENOM:HOG000177219 KO:K12193 OMA:MSKEMMK EMBL:AACD01000115
OrthoDB:EOG4F7RVD RefSeq:XP_664524.1 ProteinModelPortal:Q5AXR0
STRING:Q5AXR0 EnsemblFungi:CADANIAT00007726 GeneID:2870630
KEGG:ani:AN6920.2 Uniprot:Q5AXR0
Length = 228
Score = 103 (41.3 bits), Expect = 0.00090, P = 0.00090
Identities = 47/220 (21%), Positives = 91/220 (41%)
Query: 8 PNPKEALRESKREMQHATRGMEKEIGALQQEEKK----LVAEIKRT------AKTGNEGA 57
P+P+ +R+ + ++ TR ++++I L+ + K +V KR AK N A
Sbjct: 11 PDPQTQMRKCNQLIRANTRQLDRDIAQLKALDGKTRQTIVNASKRAQRNPARAKQANLEA 70
Query: 58 TKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQME 117
K+LAR+L+R+R+Q L SRAQ++ + A + +
Sbjct: 71 -KMLARELVRVRRQTTRLTTSRAQLQSVQMQVNEAFAVRKIQGSLQKSTGIMKDVNTLIR 129
Query: 118 PAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQ 177
+ + M + + + + EM+ D I ++L EI SQ
Sbjct: 130 LPQLSATMHQLATELVRAGIIEEMVDDAIPNNELLEDEEAEADEEVDKILQEILQGKLSQ 189
Query: 178 LSAA-PKGKI-----ASKNTEDASSSGIDELEKRLAALRN 211
+ P+ + A + ED ++ + ++ RL AL++
Sbjct: 190 VDEVKPERPLEEPQQAEEEFEDQEAA-LAQMRGRLEALKS 228
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.122 0.312 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 212 178 0.00086 109 3 10 23 0.47 32
31 0.39 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 79
No. of states in DFA: 532 (57 KB)
Total size of DFA: 152 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.83u 0.13s 24.96t Elapsed: 00:00:01
Total cpu time: 24.84u 0.13s 24.97t Elapsed: 00:00:01
Start: Fri May 10 07:34:13 2013 End: Fri May 10 07:34:14 2013