BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028207
(212 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O46606|DDHD1_BOVIN Phospholipase DDHD1 OS=Bos taurus GN=DDHD1 PE=1 SV=1
Length = 875
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 62 VPVKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYR 120
V V+GGLYEVD+ + C+PVYWN D V+RG WF W P+ E+ + +E +
Sbjct: 260 VCVRGGLYEVDVTQGECYPVYWNQSDKIPVMRGQWFIDG---TWQPLEEEESNLIEQEHL 316
Query: 121 SQVWHRRTFNLLDF-LQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDAS------ 173
S+ ++ D + + K + H + D E +L DA+
Sbjct: 317 SRFRGQQMQESFDIEVSKPIDGKDAIHSFKLSRNHVDWHSVD---EVYLYSDATTSKIAR 373
Query: 174 ------GFSSIISFSGNGIKLRRGYSQ--TISANPSKVLVLLLLV 210
GFS S +G +L RGY + T+ PS+ ++ +V
Sbjct: 374 TVTQKLGFSKA---SSSGTRLHRGYVEEATLEDKPSQTTHIVFVV 415
>sp|Q8NEL9|DDHD1_HUMAN Phospholipase DDHD1 OS=Homo sapiens GN=DDHD1 PE=1 SV=2
Length = 900
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 23 CSE-GPRERASSIKKSDVQASLTESVRSAELYEVEEERV-GVPVKGGLYEVDLVRRHCFP 80
CS GP + D +S E VE + V V+GGLYEVD+ + C+P
Sbjct: 216 CSPTGPASSSGEDDDEDRACGFCQSTTGHEPEMVELVNIEPVCVRGGLYEVDVTQGECYP 275
Query: 81 VYWN-GDNRRVLRGHWFARKGGLDWLPIREDVAEQLEI----AYRSQVWHRRTFNL---- 131
VYWN D V+RG WF W P+ E+ + +E +R Q + F++
Sbjct: 276 VYWNQADKIPVMRGQWFIDG---TWQPLEEEESNLIEQEHLNCFRGQQM-QENFDIEVSK 331
Query: 132 -LDFLQLELTCKALLQYIYFLGLHALFTGEDDTWE--AWLNVDASGFSSIISFSGNGIKL 188
+D + K ++ + + ++ D T A GFS S +G +L
Sbjct: 332 SIDGKDAVHSFKLSRNHVDWHSVDEVYLYSDATTSKIARTVTQKLGFSKA---SSSGTRL 388
Query: 189 RRGYSQ--TISANPSKVLVLLLLV 210
RGY + T+ PS+ ++ +V
Sbjct: 389 HRGYVEEATLEDKPSQTTHIVFVV 412
>sp|P87109|YDK2_SCHPO Probable phospholipase C20G8.02, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC20G8.02 PE=3 SV=1
Length = 757
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 26 GPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVKGG---LYEVDLVRRHCFPVY 82
GP E + A +E + + L VE + PV LY V++V R P+Y
Sbjct: 112 GPTEIKKAKNFLPFSAEDSEHIEKSYLKAVENDGQSEPVNVNEDYLYSVNVVSRELSPIY 171
Query: 83 WNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLD 133
W+G R+LRG WF +G P E++A Q+E Y + +R N D
Sbjct: 172 WDGPVYRILRGTWFFSRGD-KLYPCEENLATQVEEGYLNSCPYREFSNEKD 221
>sp|Q6NZC7|S23IP_MOUSE SEC23-interacting protein OS=Mus musculus GN=Sec23ip PE=1 SV=2
Length = 998
Score = 47.4 bits (111), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 42 SLTESVRSAELY---EVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFAR 98
S+ +S+ E+Y + + E V + GG Y+V L R VYW + V R WF
Sbjct: 285 SVLDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYDRMRKSVYWEEEPTEVRRCTWF-Y 343
Query: 99 KGGLD--WLPIREDVAEQLEIAYRSQV----WHRR 127
KG D ++P E+ +E+LE Y+ V WHRR
Sbjct: 344 KGDTDSRFIPYTEEFSEKLEAEYKKAVSTNQWHRR 378
>sp|Q9Y6Y8|S23IP_HUMAN SEC23-interacting protein OS=Homo sapiens GN=SEC23IP PE=1 SV=1
Length = 1000
Score = 44.7 bits (104), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 42 SLTESVRSAELY---EVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFAR 98
S+ +S+ E+Y + + E V + GG Y+V L R YW + V R WF
Sbjct: 289 SVFDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYDRIRKAAYWEEEPAEVRRCTWF-Y 347
Query: 99 KGGLD--WLPIREDVAEQLEIAYRSQV----WHRR 127
KG D ++P E+ +E+LE Y+ V WHRR
Sbjct: 348 KGDTDSRFIPYTEEFSEKLEAEYKKAVTTNQWHRR 382
>sp|Q12204|YOR22_YEAST Probable phospholipase YOR022C, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YOR022C PE=1
SV=1
Length = 715
Score = 37.0 bits (84), Expect = 0.10, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 42 SLTESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGG 101
S+ +S R + + +E R + + L++VDL P YW G +V RG WF
Sbjct: 58 SVDDSNRLEKASKRQERRPVLVNEDYLFKVDLSHMELSPTYWEGPTYQVRRGVWFDSSNQ 117
Query: 102 LDWLPIREDVAEQLEIAYR 120
P+ D+ ++E Y+
Sbjct: 118 ----PLSSDLTSEIEGLYK 132
>sp|Q80Y98|DDHD2_MOUSE Phospholipase DDHD2 OS=Mus musculus GN=Ddhd2 PE=1 SV=3
Length = 699
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 58 ERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLD--WLPIREDVAEQL 115
ER+ VP GG Y+V L R + VYW+ V R WF KG D ++P E ++ L
Sbjct: 79 ERI-VPTDGGRYDVHLGERMRYAVYWDELPSEVRRCTWFY-KGDKDNKYVPYSESFSQVL 136
Query: 116 EIAY 119
E Y
Sbjct: 137 EDTY 140
>sp|O94830|DDHD2_HUMAN Phospholipase DDHD2 OS=Homo sapiens GN=DDHD2 PE=1 SV=2
Length = 711
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 62 VPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLD--WLPIREDVAEQLEIAY 119
VP GG Y+V L R + VYW+ V R WF KG D ++P E ++ LE Y
Sbjct: 82 VPTDGGRYDVHLGERMRYAVYWDELASEVRRCTWFY-KGDKDNKYVPYSESFSQVLEETY 140
>sp|Q32NQ7|DAAF3_XENLA Dynein assembly factor 3, axonemal OS=Xenopus laevis GN=dnaaf3 PE=2
SV=1
Length = 485
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 79 FPV--YWNGDNRRVLRGHWFARKGGLDW 104
FP+ YW+G NRR L + +RKG DW
Sbjct: 178 FPIDKYWDGKNRRHLGTRYDSRKGAYDW 205
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,762,649
Number of Sequences: 539616
Number of extensions: 3234594
Number of successful extensions: 7739
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 7726
Number of HSP's gapped (non-prelim): 18
length of query: 212
length of database: 191,569,459
effective HSP length: 112
effective length of query: 100
effective length of database: 131,132,467
effective search space: 13113246700
effective search space used: 13113246700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)