BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028214
(212 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8K1A0|METL5_MOUSE Methyltransferase-like protein 5 OS=Mus musculus GN=Mettl5 PE=2
SV=2
Length = 209
Score = 221 bits (563), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/206 (53%), Positives = 142/206 (68%), Gaps = 6/206 (2%)
Query: 1 MKLKQLESVLGDLEQFSNPKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCG 60
+KLK+LES L +++ F PK+ LEQYPT PHIA+ MLYT N++ D+ NK VAD GCGCG
Sbjct: 4 LKLKELESRLQEVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKAVADLGCGCG 63
Query: 61 TLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGH--VDTV 117
L A +LGA + DID D+LE+ ++N + EL ++D +QCD+ +L R DTV
Sbjct: 64 VLSIGAAMLGAGLCVGFDIDEDALEIFNKNVEEFELTNVDMIQCDVYSLSNRMSKLFDTV 123
Query: 118 VMNPPFGTR-KKGVDMDFLSMALKVASQAVYSLHKTSTREHVKKAALRDFNASSAEVLCE 176
+MNPPFGT+ KG DM FL AL +A AVYSLHK+STREH++K A E++ E
Sbjct: 124 IMNPPFGTKNNKGTDMAFLKTALGMARTAVYSLHKSSTREHIQKKAAE--WKVKIEIIAE 181
Query: 177 LRYDVPQLYKFHKKKEVDIAVDLWRF 202
LRYD+P LY FHKKK VDI VDL RF
Sbjct: 182 LRYDLPALYNFHKKKSVDIEVDLIRF 207
>sp|Q9NRN9|METL5_HUMAN Methyltransferase-like protein 5 OS=Homo sapiens GN=METTL5 PE=1
SV=1
Length = 209
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 141/206 (68%), Gaps = 6/206 (2%)
Query: 1 MKLKQLESVLGDLEQFSNPKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCG 60
++LK+LES L ++ F PK+ LEQYPT PHIA+ MLYT N++ D+ NKVVAD GCGCG
Sbjct: 4 VRLKELESRLQQVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKVVADLGCGCG 63
Query: 61 TLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR--GHVDTV 117
L +LGA + DID D+LE+ + NA + EL +ID VQCD+ L R DTV
Sbjct: 64 VLSIGTAMLGAGLCVGFDIDEDALEIFNRNAEEFELTNIDMVQCDVCLLSNRMSKSFDTV 123
Query: 118 VMNPPFGTR-KKGVDMDFLSMALKVASQAVYSLHKTSTREHVKKAALRDFNASSAEVLCE 176
+MNPPFGT+ KG DM FL AL++A AVYSLHK+STREHV+K A +++ E
Sbjct: 124 IMNPPFGTKNNKGTDMAFLKTALEMARTAVYSLHKSSTREHVQKKAAE--WKIKIDIIAE 181
Query: 177 LRYDVPQLYKFHKKKEVDIAVDLWRF 202
LRYD+P YKFHKKK VDI VDL RF
Sbjct: 182 LRYDLPASYKFHKKKSVDIEVDLIRF 207
>sp|Q57732|Y284_METJA Uncharacterized protein MJ0284 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0284 PE=4 SV=1
Length = 219
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 16/211 (7%)
Query: 1 MKLKQLESVLGDLEQFSNPKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCG 60
+K K LE +L L++ NPK +LEQY +A+ +L+ A N F N VV D GCG G
Sbjct: 2 IKKKHLEMMLDSLKRHPNPKADLEQYTIDGKLAADILFFAVNDF---YNNVVIDLGCGTG 58
Query: 61 TLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL----------EW 110
L + +LGA + I IDID +S+E A ENA L +D+DF DIR++ E
Sbjct: 59 RLAIGSKILGAKRAIGIDIDRESIEAAKENAKKLNVDVDFYCMDIRDVDDEFLNNVLGED 118
Query: 111 RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHKTSTREHVKKAALRDFNASS 170
R V+ NPPFG +KK D FL AL++ +Y++H T++ V K +
Sbjct: 119 RDLKRVVIQNPPFGAQKKHADRVFLDKALEIGD-IIYTIHNYPTKDFVIKYV--EDKGGK 175
Query: 171 AEVLCELRYDVPQLYKFHKKKEVDIAVDLWR 201
+ E + +P +Y+FHKKK V+I V ++R
Sbjct: 176 ITHIYEAFFRIPAIYEFHKKKVVEIPVVIFR 206
>sp|A5IN97|PRMA_THEP1 Ribosomal protein L11 methyltransferase OS=Thermotoga petrophila
(strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=prmA PE=3
SV=1
Length = 264
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H +RM + N V+ D GCG G L AA LGA QV+A+D+D ++E
Sbjct: 108 FGTGLHPTTRMSVFFLKKYLKEGNTVL-DVGCGTGILAIAAKKLGASQVVAVDVDEQAVE 166
Query: 86 LASENAADLELDIDFVQCDIRNLEWRGHVDTVVMN 120
+A EN ++D+ D+ + E G D VV N
Sbjct: 167 VAEENVRKNDVDVLVKWSDLLS-EVEGTFDIVVSN 200
>sp|Q1QA78|PRMA_PSYCK Ribosomal protein L11 methyltransferase OS=Psychrobacter
cryohalolentis (strain K5) GN=prmA PE=3 SV=1
Length = 308
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 26 YPTGPHIASRML--YTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDS 83
+ TG H +R+ + E D+++KVV D+GCG G LG AA LLGA V A+DID +
Sbjct: 140 FGTGYHATTRLCLDWLTEQ---DLTDKVVIDYGCGSGILGIAALLLGARHVYAVDIDPQA 196
Query: 84 LELASENAADLELD 97
+ ++NAA +D
Sbjct: 197 VLATNQNAARNSVD 210
>sp|Q9X0G8|PRMA_THEMA Ribosomal protein L11 methyltransferase OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=prmA PE=3 SV=1
Length = 264
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H +RM + N V+ D GCG G L AA LGA +V+A+D+D ++E
Sbjct: 108 FGTGLHPTTRMSVFFLKKYLKEGNTVL-DVGCGTGILAIAAKKLGASRVVAVDVDEQAVE 166
Query: 86 LASENAADLELDIDFVQCDIRNLEWRGHVDTVVMN 120
+A EN ++D+ D+ + E G D VV N
Sbjct: 167 VAEENVRKNDVDVLVKWSDLLS-EVEGTFDIVVSN 200
>sp|B1L841|PRMA_THESQ Ribosomal protein L11 methyltransferase OS=Thermotoga sp. (strain
RQ2) GN=prmA PE=3 SV=1
Length = 264
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H +RM + N V+ D GCG G L AA LGA QV+A+D+D ++E
Sbjct: 108 FGTGLHPTTRMSVFFLKKYLKEGNTVL-DVGCGTGILAIAAKKLGASQVVAVDVDEQAVE 166
Query: 86 LASENAADLELDIDFVQCDIRNLEWRGHVDTVVMN 120
+A EN ++D+ D+ + + G D VV N
Sbjct: 167 VAEENVRKNDVDVLVKWSDLLS-DVEGTFDIVVSN 200
>sp|B0VLL0|PRMA_ACIBS Ribosomal protein L11 methyltransferase OS=Acinetobacter baumannii
(strain SDF) GN=prmA PE=3 SV=1
Length = 301
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H AS L DV NK+V D+GCG G LG AA LLGA +V A DID ++
Sbjct: 138 FGTGNH-ASTFLCLQWLGKTDVKNKIVIDYGCGSGILGVAALLLGAKKVYATDIDPQAVL 196
Query: 86 LASENA 91
+NA
Sbjct: 197 ATKQNA 202
>sp|C4K4P6|PRMA_HAMD5 Ribosomal protein L11 methyltransferase OS=Hamiltonella defensa
subsp. Acyrthosiphon pisum (strain 5AT) GN=prmA PE=3
SV=1
Length = 305
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + +S D+ NK++ DFGCG G L AA LGA Q I IDID ++E
Sbjct: 144 FGTGTHPTTALCLEWLDSL-DLQNKILIDFGCGSGILAIAALKLGAKQAIGIDIDPQAIE 202
Query: 86 LASENA 91
+ +NA
Sbjct: 203 ASRDNA 208
>sp|A7MXI3|PRMA_VIBHB Ribosomal protein L11 methyltransferase OS=Vibrio harveyi (strain
ATCC BAA-1116 / BB120) GN=prmA PE=3 SV=1
Length = 295
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + S D+S K V DFGCG G L AA LGA++VI IDID +L+
Sbjct: 138 FGTGTHPTTALCLEWLESL-DLSGKTVIDFGCGSGILAIAAIKLGAEKVIGIDIDPQALQ 196
Query: 86 LASENA 91
+ +NA
Sbjct: 197 ASRDNA 202
>sp|Q3IIC0|PRMA_PSEHT Ribosomal protein L11 methyltransferase OS=Pseudoalteromonas
haloplanktis (strain TAC 125) GN=prmA PE=3 SV=1
Length = 293
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + S D++ K V DFGCG G LG AA LGA+++I IDID +LE
Sbjct: 137 FGTGTHATTALCLKWLES-QDLTGKTVVDFGCGSGILGIAAIKLGAERMIGIDIDPQALE 195
Query: 86 LASENA 91
+ +NA
Sbjct: 196 ASLDNA 201
>sp|Q4FRP0|PRMA_PSYA2 Ribosomal protein L11 methyltransferase OS=Psychrobacter arcticus
(strain DSM 17307 / 273-4) GN=prmA PE=3 SV=1
Length = 308
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 26 YPTGPHIASRML--YTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDS 83
+ TG H +R+ + E D+ +KVV D+GCG G LG AA LLGA V A+DID +
Sbjct: 140 FGTGYHATTRLCLDWLTEQ---DLKDKVVIDYGCGSGILGIAALLLGARHVYAVDIDPQA 196
Query: 84 LELASENAADLELD 97
+ ++NAA +D
Sbjct: 197 VLATNQNAARNSVD 210
>sp|A5WFX2|PRMA_PSYWF Ribosomal protein L11 methyltransferase OS=Psychrobacter sp.
(strain PRwf-1) GN=prmA PE=3 SV=1
Length = 307
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H +R+ D+S+KV+ D+GCG G LG AA LLGA QV ++DID ++
Sbjct: 136 FGTGYHATTRLCLDWLTD-QDLSDKVIIDYGCGSGILGIAALLLGAKQVYSVDIDPQAVL 194
Query: 86 LASENA 91
+NA
Sbjct: 195 ATKQNA 200
>sp|B8F6T6|PRMA_HAEPS Ribosomal protein L11 methyltransferase OS=Haemophilus parasuis
serovar 5 (strain SH0165) GN=prmA PE=3 SV=1
Length = 294
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + T +S D+++K V DFGCG G L AA LGA + I IDID ++
Sbjct: 137 FGTGTHPTTALCLTWLDSL-DLTDKTVIDFGCGSGILAIAALKLGAKKAIGIDIDPQAI- 194
Query: 86 LASENAADL 94
LAS+N A++
Sbjct: 195 LASQNNAEV 203
>sp|B0V7H8|PRMA_ACIBY Ribosomal protein L11 methyltransferase OS=Acinetobacter baumannii
(strain AYE) GN=prmA PE=3 SV=1
Length = 301
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H AS L DV +K+V D+GCG G LG AA LLGA +V A DID ++
Sbjct: 138 FGTGNH-ASTFLCLQWLGKTDVKDKIVIDYGCGSGILGVAALLLGAKKVYATDIDPQAVL 196
Query: 86 LASENA 91
+NA
Sbjct: 197 ATKQNA 202
>sp|A3M6R7|PRMA_ACIBT Ribosomal protein L11 methyltransferase OS=Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755) GN=prmA PE=3 SV=2
Length = 301
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H AS L DV +K+V D+GCG G LG AA LLGA +V A DID ++
Sbjct: 138 FGTGNH-ASTFLCLQWLGKTDVKDKIVIDYGCGSGILGVAALLLGAKKVYATDIDPQAVL 196
Query: 86 LASENA 91
+NA
Sbjct: 197 ATKQNA 202
>sp|B7IC17|PRMA_ACIB5 Ribosomal protein L11 methyltransferase OS=Acinetobacter baumannii
(strain AB0057) GN=prmA PE=3 SV=1
Length = 301
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H AS L DV +K+V D+GCG G LG AA LLGA +V A DID ++
Sbjct: 138 FGTGNH-ASTFLCLQWLGKTDVKDKIVIDYGCGSGILGVAALLLGAKKVYATDIDPQAVL 196
Query: 86 LASENA 91
+NA
Sbjct: 197 ATKQNA 202
>sp|B7H0I7|PRMA_ACIB3 Ribosomal protein L11 methyltransferase OS=Acinetobacter baumannii
(strain AB307-0294) GN=prmA PE=3 SV=1
Length = 301
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H AS L DV +K+V D+GCG G LG AA LLGA +V A DID ++
Sbjct: 138 FGTGNH-ASTFLCLQWLGKTDVKDKIVIDYGCGSGILGVAALLLGAKKVYATDIDPQAVL 196
Query: 86 LASENA 91
+NA
Sbjct: 197 ATKQNA 202
>sp|C4LAF1|PRMA_TOLAT Ribosomal protein L11 methyltransferase OS=Tolumonas auensis
(strain DSM 9187 / TA4) GN=prmA PE=3 SV=1
Length = 292
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + +S D+ K + DFGCG G L AA LGA++VI IDID ++E
Sbjct: 135 FGTGTHPTTALCLQWLDSL-DLKGKTLVDFGCGSGILAIAALKLGAERVIGIDIDPQAIE 193
Query: 86 LASENA 91
+ +NA
Sbjct: 194 ASRDNA 199
>sp|Q8DD03|PRMA_VIBVU Ribosomal protein L11 methyltransferase OS=Vibrio vulnificus
(strain CMCP6) GN=prmA PE=3 SV=1
Length = 295
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + S D+S K V DFGCG G L AA LGA++VI IDID +L
Sbjct: 138 FGTGTHPTTALCLEWLESL-DLSGKTVIDFGCGSGILAIAAIKLGAEKVIGIDIDPQALL 196
Query: 86 LASENA 91
+ +NA
Sbjct: 197 ASKDNA 202
>sp|A0KNJ1|PRMA_AERHH Ribosomal protein L11 methyltransferase OS=Aeromonas hydrophila
subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=prmA
PE=3 SV=1
Length = 292
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + + D++ K V DFGCG G LG AA LGA +VI IDID +++
Sbjct: 135 FGTGTHPTTALCLQWLDGL-DLAGKTVVDFGCGSGILGIAALKLGAARVIGIDIDPQAIQ 193
Query: 86 LASENA 91
+ +NA
Sbjct: 194 ASRDNA 199
>sp|Q58338|Y928_METJA Putative protein methyltransferase MJ0928 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0928 PE=3 SV=1
Length = 197
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDI 105
DV NK V + G G G + A GA +++ +DI+ +++LA ENA ++I F + D+
Sbjct: 32 DVKNKDVLEIGVGTGLISIACAKKGAKKIVGVDINPYAVKLAKENAKLNNVNISFFESDL 91
Query: 106 RNLEWRGHVDTVVMNPPF 123
G D ++ NPP+
Sbjct: 92 FE-NVTGKFDVILFNPPY 108
>sp|Q15ZR4|PRMA_PSEA6 Ribosomal protein L11 methyltransferase OS=Pseudoalteromonas
atlantica (strain T6c / ATCC BAA-1087) GN=prmA PE=3 SV=1
Length = 292
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + ++ ++S+K+V DFGCG G LG AA LGA +V+ IDID +L
Sbjct: 137 FGTGTHPTTALCLRWLDAL-ELSDKLVVDFGCGSGILGIAAIKLGAKRVVGIDIDPQAL- 194
Query: 86 LASENAAD 93
L+S+ AD
Sbjct: 195 LSSQTNAD 202
>sp|Q87KU2|PRMA_VIBPA Ribosomal protein L11 methyltransferase OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=prmA PE=3 SV=1
Length = 295
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + S D+S K V DFGCG G L AA LGA++VI IDID +L
Sbjct: 138 FGTGTHPTTALCLEWLESM-DLSGKTVIDFGCGSGILAIAAIKLGAEKVIGIDIDPQALL 196
Query: 86 LASENA 91
+ +NA
Sbjct: 197 ASKDNA 202
>sp|Q489G6|PRMA_COLP3 Ribosomal protein L11 methyltransferase OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=prmA PE=3
SV=1
Length = 293
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + T + D+ +K V DFGCG G L AA LGA +VI IDID +L+
Sbjct: 138 FGTGTHPTTALCLTWLDGL-DLQDKTVVDFGCGSGILSLAALKLGAKKVIGIDIDPQALQ 196
Query: 86 LASENA 91
+ NA
Sbjct: 197 ASLANA 202
>sp|A4SJL7|PRMA_AERS4 Ribosomal protein L11 methyltransferase OS=Aeromonas salmonicida
(strain A449) GN=prmA PE=3 SV=1
Length = 292
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + + D++ K V DFGCG G LG AA LGA +VI IDID +++
Sbjct: 135 FGTGTHPTTALCLQWLDGL-DLAGKTVVDFGCGSGILGIAALKLGAARVIGIDIDPQAIQ 193
Query: 86 LASENA 91
+ +NA
Sbjct: 194 ASHDNA 199
>sp|O86951|PRMA_THENE Ribosomal protein L11 methyltransferase OS=Thermotoga neapolitana
GN=prmA PE=3 SV=2
Length = 264
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H ++M + ++VV D GCG G L A LGA V+A+D+D ++E
Sbjct: 108 FGTGLHPTTQMSVLFLKKYLKKGDRVV-DVGCGTGILAIVAKKLGASYVLAVDVDEQAVE 166
Query: 86 LASENAADLELDIDFVQCDIRNLEWRGHVDTVVMN 120
+A EN +D+ + D+ + E G D VV N
Sbjct: 167 VAKENVQKNSVDVTVKRSDLLS-EVEGVFDLVVSN 200
>sp|Q9KV64|PRMA_VIBCH Ribosomal protein L11 methyltransferase OS=Vibrio cholerae serotype
O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=prmA
PE=3 SV=1
Length = 295
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + ++ D+S K V DFGCG G L AA LGA +VI IDID +L
Sbjct: 138 FGTGTHPTTALCLEWLDNL-DLSGKTVIDFGCGSGILAIAAIKLGAAKVIGIDIDPQALL 196
Query: 86 LASENAA 92
+ +NAA
Sbjct: 197 ASKDNAA 203
>sp|A6VZL5|PRMA_MARMS Ribosomal protein L11 methyltransferase OS=Marinomonas sp. (strain
MWYL1) GN=prmA PE=3 SV=1
Length = 296
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + +S D +K + D+GCG G LG A LLGA+ ++ IDID +++
Sbjct: 139 FGTGTHPTTALCLQWLDSI-DCKDKTIIDYGCGSGILGIAGLLLGANNMVGIDIDPQAVQ 197
Query: 86 LASENAADLELDIDFVQCDIRNLEWRGHVDTVVMN 120
NA ++D ++ + E D VV N
Sbjct: 198 ATEANAERNKIDPSRLEVKLPPYESDLQADIVVAN 232
>sp|Q97J51|Y1435_CLOAB Uncharacterized RNA methyltransferase CA_C1435 OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=CA_C1435 PE=3 SV=1
Length = 456
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 44 FGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQ 102
GDVSNK V D CG GT+G A+ A++VI I++ +++E A EN + + F+
Sbjct: 306 LGDVSNKTVFDLYCGTGTIGQLAS-KKAEKVIGIELIEEAVEAAKENTKLNNISNCSFIA 364
Query: 103 CDIRNL--EWRGHVDTVVMNPPFGTRKKGVDMDFLSMALKV-ASQAVY 147
D+ + E + DT++++PP + GV + + +K A + VY
Sbjct: 365 GDVAKVITEIKEKPDTIILDPP----RPGVSPNAMKYVIKFNAPEIVY 408
>sp|Q0HQK1|PRMA_SHESR Ribosomal protein L11 methyltransferase OS=Shewanella sp. (strain
MR-7) GN=prmA PE=3 SV=1
Length = 293
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + +S D+SN+ V DFGCG G L AA LGA +V IDID ++E
Sbjct: 137 FGTGTHPTTALCLEWLDSL-DLSNEEVIDFGCGSGILAVAALKLGAKKVTGIDIDYQAIE 195
Query: 86 LASENA 91
+ NA
Sbjct: 196 ASKANA 201
>sp|Q0HN86|PRMA_SHESM Ribosomal protein L11 methyltransferase OS=Shewanella sp. (strain
MR-4) GN=prmA PE=3 SV=1
Length = 293
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + +S D+SN+ V DFGCG G L AA LGA +V IDID ++E
Sbjct: 137 FGTGTHPTTALCLEWLDSL-DLSNEEVIDFGCGSGILAVAALKLGAKKVTGIDIDYQAIE 195
Query: 86 LASENA 91
+ NA
Sbjct: 196 ASKANA 201
>sp|A0KS74|PRMA_SHESA Ribosomal protein L11 methyltransferase OS=Shewanella sp. (strain
ANA-3) GN=prmA PE=3 SV=1
Length = 293
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + +S D+SN+ V DFGCG G L AA LGA +V IDID ++E
Sbjct: 137 FGTGTHPTTALCLEWLDSL-DLSNEEVIDFGCGSGILAVAALKLGAKKVTGIDIDYQAIE 195
Query: 86 LASENA 91
+ NA
Sbjct: 196 ASKANA 201
>sp|A5IHD3|PRMA_LEGPC Ribosomal protein L11 methyltransferase OS=Legionella pneumophila
(strain Corby) GN=prmA PE=3 SV=1
Length = 289
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELA 87
TG H + + T D+ NK V D+GCG G L AA LGA V A+DID+ +L+
Sbjct: 136 TGTHATTSLCLTWLEQ-ADLKNKSVIDYGCGSGILSLAAIKLGAKHVYAVDIDNQALQAT 194
Query: 88 SENA 91
NA
Sbjct: 195 QNNA 198
>sp|P60094|PRMA_VIBVY Ribosomal protein L11 methyltransferase OS=Vibrio vulnificus
(strain YJ016) GN=prmA PE=3 SV=1
Length = 295
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENA 91
D+S K V DFGCG G L AA LGA++VI IDID +L + +NA
Sbjct: 157 DLSGKTVIDFGCGSGILAIAAIKLGAEKVIGIDIDPQALLASKDNA 202
>sp|C3LQP9|PRMA_VIBCM Ribosomal protein L11 methyltransferase OS=Vibrio cholerae serotype
O1 (strain M66-2) GN=prmA PE=3 SV=1
Length = 295
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + ++ D++ K V DFGCG G L AA LGA +VI IDID +L
Sbjct: 138 FGTGTHPTTALCLEWLDNL-DLTGKTVIDFGCGSGILAIAAIKLGAAKVIGIDIDPQALL 196
Query: 86 LASENAA 92
+ +NAA
Sbjct: 197 ASKDNAA 203
>sp|A5F3S3|PRMA_VIBC3 Ribosomal protein L11 methyltransferase OS=Vibrio cholerae serotype
O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=prmA PE=3
SV=1
Length = 295
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + ++ D++ K V DFGCG G L AA LGA +VI IDID +L
Sbjct: 138 FGTGTHPTTALCLEWLDNL-DLTGKTVIDFGCGSGILAIAAIKLGAAKVIGIDIDPQALL 196
Query: 86 LASENAA 92
+ +NAA
Sbjct: 197 ASKDNAA 203
>sp|B0TJ37|PRMA_SHEHH Ribosomal protein L11 methyltransferase OS=Shewanella halifaxensis
(strain HAW-EB4) GN=prmA PE=3 SV=1
Length = 293
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + + D SNK V DFGCG G L AA LGA++V IDID ++E
Sbjct: 137 FGTGTHPTTALCLEWLDGL-DYSNKDVIDFGCGSGILAVAALKLGAERVTGIDIDYQAIE 195
Query: 86 LASENA 91
+ NA
Sbjct: 196 ASKANA 201
>sp|B3PBH5|PRMA_CELJU Ribosomal protein L11 methyltransferase OS=Cellvibrio japonicus
(strain Ueda107) GN=prmA PE=3 SV=1
Length = 294
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 28 TGPHIASR--MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
TG H + M + + F D+ V D+GCG G LG AA LLGA +V+ +DID +L
Sbjct: 138 TGTHPTTFLCMQWIDQQDFTDLE---VIDYGCGSGILGIAALLLGARKVVGVDIDPQALL 194
Query: 86 LASENAADLELDID 99
+ENA +L D
Sbjct: 195 ATTENAKRNQLPAD 208
>sp|Q5X7S8|PRMA_LEGPA Ribosomal protein L11 methyltransferase OS=Legionella pneumophila
(strain Paris) GN=prmA PE=3 SV=1
Length = 289
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELA 87
TG H + + T D+ NK + D+GCG G L AA LGA V A+DID+ +L+
Sbjct: 136 TGTHATTSLCLTWLEQ-ADLKNKSIIDYGCGSGILSLAAIKLGAKHVYAVDIDNQALQAT 194
Query: 88 SENA 91
NA
Sbjct: 195 QSNA 198
>sp|A1AT86|PRMA_PELPD Ribosomal protein L11 methyltransferase OS=Pelobacter propionicus
(strain DSM 2379) GN=prmA PE=3 SV=1
Length = 309
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 26 YPTGPHIASRMLYTAENSFGD----VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDS 81
+ TG H +R+ D + V D G G G L AA LGA +V+A+DID
Sbjct: 144 FGTGGHETTRLCLELLEEIMDGMPILLTPAVLDLGTGSGILAMAAVRLGAGRVVAVDIDP 203
Query: 82 DSLELASENAADLELDIDFVQCDIRNLE-WRGHVDTVVMN 120
++E+A EN A +L D V+CD LE G D ++ N
Sbjct: 204 QAVEVARENLALNDL-TDQVECDTTPLEALPGTFDVILAN 242
>sp|A6WTE5|PRMA_SHEB8 Ribosomal protein L11 methyltransferase OS=Shewanella baltica
(strain OS185) GN=prmA PE=3 SV=1
Length = 293
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + +S D+SNK V DFGCG G L AA LGA V IDID +++
Sbjct: 137 FGTGTHPTTALCLEWLDSL-DLSNKEVIDFGCGSGILAVAALKLGAKNVTGIDIDYQAID 195
Query: 86 LASENA 91
+ NA
Sbjct: 196 ASRANA 201
>sp|Q5ZYB1|PRMA_LEGPH Ribosomal protein L11 methyltransferase OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=prmA PE=3 SV=1
Length = 289
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELA 87
TG H + + T D+ NK + D+GCG G L AA LGA V A+DID+ +L+
Sbjct: 136 TGTHATTSLCLTWLEQ-ADLKNKSIIDYGCGSGILSLAAIKLGAKHVYAVDIDNQALQAT 194
Query: 88 SENA 91
NA
Sbjct: 195 QSNA 198
>sp|A8GZI2|PRMA_SHEPA Ribosomal protein L11 methyltransferase OS=Shewanella pealeana
(strain ATCC 700345 / ANG-SQ1) GN=prmA PE=3 SV=1
Length = 293
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + + D SNK V DFGCG G L AA LGA++V IDID ++E
Sbjct: 137 FGTGTHPTTALCLEWLDGL-DYSNKDVIDFGCGSGILAVAALKLGAERVTGIDIDYQAIE 195
Query: 86 LASENA 91
+ NA
Sbjct: 196 ASKANA 201
>sp|Q5WZ79|PRMA_LEGPL Ribosomal protein L11 methyltransferase OS=Legionella pneumophila
(strain Lens) GN=prmA PE=3 SV=1
Length = 289
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELA 87
TG H + + T D+ NK + D+GCG G L AA LGA V A+DID+ +L+
Sbjct: 136 TGTHATTSLCLTWLEQ-ADLKNKSIIDYGCGSGILSLAAIKLGAKHVYAVDIDNQALQAT 194
Query: 88 SENA 91
NA
Sbjct: 195 QSNA 198
>sp|B3GYL9|PRMA_ACTP7 Ribosomal protein L11 methyltransferase OS=Actinobacillus
pleuropneumoniae serotype 7 (strain AP76) GN=prmA PE=3
SV=1
Length = 293
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + +S D++ K V DFGCG G L AA LGA Q I IDID ++
Sbjct: 137 FGTGTHPTTALCLQWLDSL-DLTGKTVIDFGCGSGILAIAALKLGAKQAIGIDIDPQAI- 194
Query: 86 LASENAAD 93
LAS N A+
Sbjct: 195 LASGNNAE 202
>sp|B0BRD1|PRMA_ACTPJ Ribosomal protein L11 methyltransferase OS=Actinobacillus
pleuropneumoniae serotype 3 (strain JL03) GN=prmA PE=3
SV=1
Length = 293
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + +S D++ K V DFGCG G L AA LGA Q I IDID ++
Sbjct: 137 FGTGTHPTTALCLQWLDSL-DLTGKTVIDFGCGSGILAIAALKLGAKQAIGIDIDPQAI- 194
Query: 86 LASENAAD 93
LAS N A+
Sbjct: 195 LASGNNAE 202
>sp|A3N2I5|PRMA_ACTP2 Ribosomal protein L11 methyltransferase OS=Actinobacillus
pleuropneumoniae serotype 5b (strain L20) GN=prmA PE=3
SV=1
Length = 293
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + +S D++ K V DFGCG G L AA LGA Q I IDID ++
Sbjct: 137 FGTGTHPTTALCLQWLDSL-DLTGKTVIDFGCGSGILAIAALKLGAKQAIGIDIDPQAI- 194
Query: 86 LASENAAD 93
LAS N A+
Sbjct: 195 LASGNNAE 202
>sp|Q8R933|Y1797_THETN Uncharacterized RNA methyltransferase TTE1797 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=TTE1797 PE=3 SV=1
Length = 450
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ T + A R+ T GDVSNK + D CG GT+G L A +VI I++ +++
Sbjct: 284 FQTNSYGAERIYSTVREFAGDVSNKTIFDLYCGTGTIGIVMAPL-ARKVIGIELVEEAVF 342
Query: 86 LASENAA--DLELDIDFVQCDIRN--LEWRGHVDTVVMNPP 122
A ENAA LE + F+ D+ E + D VV++PP
Sbjct: 343 SAKENAALNGLENAV-FIAGDVSKKLREIKEKPDIVVVDPP 382
>sp|Q8EJR7|PRMA_SHEON Ribosomal protein L11 methyltransferase OS=Shewanella oneidensis
(strain MR-1) GN=prmA PE=3 SV=1
Length = 293
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLE 85
+ TG H + + +S D+SN+ V DFGCG G L AA LGA +V IDID +++
Sbjct: 137 FGTGTHPTTALCLEWLDSL-DLSNEEVIDFGCGSGILAVAALKLGAKKVTGIDIDYQAID 195
Query: 86 LASENA 91
+ NA
Sbjct: 196 ASKANA 201
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,979,236
Number of Sequences: 539616
Number of extensions: 2856746
Number of successful extensions: 10014
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 603
Number of HSP's that attempted gapping in prelim test: 9444
Number of HSP's gapped (non-prelim): 1092
length of query: 212
length of database: 191,569,459
effective HSP length: 112
effective length of query: 100
effective length of database: 131,132,467
effective search space: 13113246700
effective search space used: 13113246700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)